Query 013217
Match_columns 447
No_of_seqs 326 out of 2841
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 01:36:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013217.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013217hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 5E-104 1E-108 713.7 39.4 446 1-447 21-475 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 5E-100 1E-104 700.4 42.4 405 2-446 8-413 (413)
3 PLN02271 serine hydroxymethylt 100.0 4.6E-92 1E-96 688.1 43.2 441 1-447 129-584 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 4.2E-86 9.1E-91 633.3 31.2 391 1-391 1-399 (399)
5 PLN03226 serine hydroxymethylt 100.0 3.3E-76 7.2E-81 588.5 45.5 444 1-447 15-466 (475)
6 PRK13580 serine hydroxymethylt 100.0 1.9E-76 4.1E-81 578.1 41.9 421 1-445 30-485 (493)
7 PTZ00094 serine hydroxymethylt 100.0 1.6E-66 3.4E-71 521.7 46.3 438 1-447 15-452 (452)
8 PRK13034 serine hydroxymethylt 100.0 4.4E-57 9.4E-62 448.0 44.4 407 1-445 9-416 (416)
9 PRK00011 glyA serine hydroxyme 100.0 3.2E-52 7E-57 416.3 45.0 408 1-446 6-414 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 9.4E-49 2E-53 389.9 42.8 384 2-397 1-385 (402)
11 COG0520 csdA Selenocysteine ly 100.0 1.1E-36 2.4E-41 297.7 30.5 343 27-396 29-404 (405)
12 COG1104 NifS Cysteine sulfinat 100.0 2.8E-33 6.1E-38 263.6 29.2 340 26-399 7-379 (386)
13 PRK10874 cysteine sulfinate de 100.0 5.6E-31 1.2E-35 262.0 31.7 344 22-397 20-398 (401)
14 cd06451 AGAT_like Alanine-glyo 100.0 1.9E-30 4E-35 254.3 33.1 331 23-395 1-355 (356)
15 PRK09295 bifunctional cysteine 100.0 8.8E-31 1.9E-35 260.8 30.9 340 26-396 29-403 (406)
16 TIGR03392 FeS_syn_CsdA cystein 100.0 1.8E-30 3.8E-35 258.2 31.6 343 23-397 18-395 (398)
17 PLN02409 serine--glyoxylate am 100.0 1.1E-29 2.4E-34 251.7 33.0 335 22-398 10-373 (401)
18 PLN02855 Bifunctional selenocy 100.0 4.8E-30 1E-34 256.9 30.2 341 27-398 39-419 (424)
19 TIGR01979 sufS cysteine desulf 100.0 1.8E-29 4E-34 251.4 33.0 341 26-397 24-401 (403)
20 PF00266 Aminotran_5: Aminotra 100.0 6E-30 1.3E-34 252.0 29.2 333 26-387 5-371 (371)
21 COG1168 MalY Bifunctional PLP- 100.0 1.4E-29 3.1E-34 233.8 29.4 339 21-392 26-385 (388)
22 TIGR03402 FeS_nifS cysteine de 100.0 1.6E-29 3.4E-34 249.7 30.9 338 26-397 5-372 (379)
23 COG0436 Aspartate/tyrosine/aro 100.0 4.5E-29 9.7E-34 244.6 32.6 337 21-396 29-390 (393)
24 TIGR01977 am_tr_V_EF2568 cyste 100.0 3.6E-29 7.7E-34 247.1 31.0 335 31-393 11-375 (376)
25 COG0075 Serine-pyruvate aminot 100.0 1.5E-28 3.3E-33 233.6 33.6 342 22-398 6-364 (383)
26 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.9E-29 8.5E-34 248.5 31.0 336 26-391 23-397 (397)
27 cd06453 SufS_like Cysteine des 100.0 3.8E-29 8.2E-34 246.6 30.0 337 26-391 5-373 (373)
28 PRK02948 cysteine desulfurase; 100.0 3.9E-29 8.4E-34 247.1 29.6 342 26-397 6-374 (381)
29 PLN02651 cysteine desulfurase 100.0 4.3E-29 9.3E-34 245.1 26.6 328 26-385 5-364 (364)
30 TIGR03403 nifS_epsilon cystein 100.0 2E-28 4.3E-33 242.1 31.2 342 26-398 5-376 (382)
31 TIGR02326 transamin_PhnW 2-ami 100.0 7.2E-28 1.6E-32 236.5 34.8 334 21-396 3-361 (363)
32 TIGR02006 IscS cysteine desulf 100.0 1E-27 2.2E-32 238.3 28.8 340 26-398 9-378 (402)
33 PRK13479 2-aminoethylphosphona 100.0 5.7E-27 1.2E-31 230.6 33.6 333 23-397 7-363 (368)
34 TIGR01814 kynureninase kynuren 100.0 2.6E-27 5.7E-32 235.7 28.9 339 20-395 26-405 (406)
35 PRK13238 tnaA tryptophanase/L- 100.0 6.2E-27 1.3E-31 233.9 31.4 339 21-398 37-434 (460)
36 TIGR01822 2am3keto_CoA 2-amino 100.0 9.2E-27 2E-31 231.2 32.4 332 22-397 40-389 (393)
37 KOG1549 Cysteine desulfurase N 100.0 1.5E-27 3.2E-32 225.5 24.3 347 21-398 43-419 (428)
38 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 3E-26 6.6E-31 224.4 32.1 329 24-395 2-355 (355)
39 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 2.7E-26 5.9E-31 226.7 31.9 333 22-397 20-381 (387)
40 PRK07179 hypothetical protein; 100.0 4.5E-26 9.7E-31 227.0 33.3 328 26-398 59-399 (407)
41 TIGR03235 DNA_S_dndA cysteine 100.0 1.1E-26 2.3E-31 227.3 27.0 300 26-353 4-321 (353)
42 PRK14012 cysteine desulfurase; 100.0 2.7E-26 5.8E-31 228.4 29.3 341 26-398 9-380 (404)
43 COG0399 WecE Predicted pyridox 100.0 3.2E-26 7E-31 218.1 28.2 326 30-396 11-372 (374)
44 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 6.4E-26 1.4E-30 222.8 30.9 331 20-396 6-367 (370)
45 cd06454 KBL_like KBL_like; thi 100.0 5.2E-26 1.1E-30 222.2 29.7 319 33-394 17-348 (349)
46 PRK13520 L-tyrosine decarboxyl 100.0 2E-25 4.4E-30 219.9 33.5 346 5-396 4-370 (371)
47 COG0156 BioF 7-keto-8-aminopel 100.0 1.4E-25 3.1E-30 215.4 30.6 327 23-394 42-387 (388)
48 cd00617 Tnase_like Tryptophana 99.9 2.6E-25 5.7E-30 219.2 30.5 311 58-400 49-411 (431)
49 PLN02724 Molybdenum cofactor s 99.9 3.3E-25 7.1E-30 236.3 31.4 354 22-398 35-489 (805)
50 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.1E-24 2.5E-29 214.8 31.8 317 32-393 32-372 (373)
51 PRK06939 2-amino-3-ketobutyrat 99.9 1.3E-24 2.8E-29 216.2 32.1 334 22-397 44-393 (397)
52 PLN00175 aminotransferase fami 99.9 1.7E-24 3.8E-29 215.4 32.4 340 20-396 54-412 (413)
53 PRK06108 aspartate aminotransf 99.9 2.5E-24 5.4E-29 213.0 32.8 335 20-396 24-381 (382)
54 PLN02483 serine palmitoyltrans 99.9 7.6E-25 1.6E-29 221.2 29.6 333 20-398 100-467 (489)
55 TIGR00858 bioF 8-amino-7-oxono 99.9 1.6E-24 3.5E-29 212.5 31.2 328 21-392 17-360 (360)
56 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.7E-25 5.9E-30 217.4 25.3 297 63-392 19-352 (352)
57 PRK07681 aspartate aminotransf 99.9 6.8E-24 1.5E-28 210.8 35.5 333 20-393 32-384 (399)
58 TIGR01437 selA_rel uncharacter 99.9 2.5E-24 5.4E-29 210.3 31.4 310 28-394 21-362 (363)
59 cd00613 GDC-P Glycine cleavage 99.9 1.7E-24 3.7E-29 215.4 30.6 294 66-391 64-398 (398)
60 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.5E-24 5.5E-29 211.1 31.3 324 25-395 6-360 (361)
61 PRK08960 hypothetical protein; 99.9 4.4E-24 9.5E-29 211.4 32.8 338 20-395 32-385 (387)
62 PRK02769 histidine decarboxyla 99.9 1.3E-23 2.8E-28 205.0 35.5 319 33-397 35-372 (380)
63 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.3E-24 2.7E-29 213.9 28.3 324 30-395 10-377 (379)
64 KOG2862 Alanine-glyoxylate ami 99.9 5.9E-24 1.3E-28 190.1 29.2 334 23-397 19-382 (385)
65 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.2E-24 2.6E-29 214.7 27.7 321 32-395 8-380 (380)
66 PRK05958 8-amino-7-oxononanoat 99.9 5.5E-24 1.2E-28 210.8 31.9 331 20-394 39-384 (385)
67 PRK06207 aspartate aminotransf 99.9 8E-24 1.7E-28 210.3 33.0 337 21-397 40-402 (405)
68 TIGR01788 Glu-decarb-GAD gluta 99.9 1.1E-23 2.4E-28 208.1 33.4 340 29-397 50-429 (431)
69 PRK12414 putative aminotransfe 99.9 7E-24 1.5E-28 209.5 31.6 345 8-392 18-382 (384)
70 PRK05355 3-phosphoserine/phosp 99.9 1.2E-24 2.6E-29 211.8 25.5 333 22-397 4-358 (360)
71 PRK04366 glycine dehydrogenase 99.9 1.4E-23 3E-28 212.1 33.4 330 30-398 80-449 (481)
72 PRK03080 phosphoserine aminotr 99.9 1.3E-24 2.8E-29 213.8 25.2 326 22-398 13-374 (378)
73 PRK08361 aspartate aminotransf 99.9 1.2E-23 2.6E-28 208.5 31.9 337 20-396 33-389 (391)
74 PRK05957 aspartate aminotransf 99.9 3.2E-23 6.8E-28 205.2 34.5 339 20-397 27-385 (389)
75 PRK06290 aspartate aminotransf 99.9 4.5E-23 9.8E-28 204.8 35.5 336 21-397 45-405 (410)
76 TIGR03540 DapC_direct LL-diami 99.9 4.1E-23 8.9E-28 204.3 35.0 332 20-391 29-380 (383)
77 cd06502 TA_like Low-specificit 99.9 4.5E-24 9.8E-29 207.6 27.7 318 27-393 3-337 (338)
78 PRK07682 hypothetical protein; 99.9 2.8E-23 6.1E-28 205.1 33.6 338 20-397 20-376 (378)
79 PRK06225 aspartate aminotransf 99.9 4.5E-23 9.7E-28 203.7 34.7 337 19-398 27-377 (380)
80 PLN03227 serine palmitoyltrans 99.9 1.4E-23 3E-28 207.1 30.8 336 27-398 4-383 (392)
81 PRK07337 aminotransferase; Val 99.9 1.9E-23 4E-28 207.0 31.5 337 20-394 30-386 (388)
82 PRK07366 succinyldiaminopimela 99.9 2.3E-23 5E-28 206.3 32.0 337 19-394 29-387 (388)
83 TIGR01821 5aminolev_synth 5-am 99.9 1.6E-23 3.6E-28 208.3 30.9 329 25-397 49-396 (402)
84 PRK13392 5-aminolevulinate syn 99.9 1.3E-23 2.8E-28 209.5 30.1 329 25-397 50-397 (410)
85 PRK09082 methionine aminotrans 99.9 1.4E-23 2.9E-28 207.7 29.4 337 20-392 30-384 (386)
86 PLN02721 threonine aldolase 99.9 1.8E-23 4E-28 204.6 29.7 325 23-396 8-351 (353)
87 PRK05942 aspartate aminotransf 99.9 1.1E-22 2.4E-27 201.7 34.5 319 20-372 35-373 (394)
88 PLN02955 8-amino-7-oxononanoat 99.9 2.7E-23 5.9E-28 204.2 29.5 328 22-397 103-461 (476)
89 PRK09064 5-aminolevulinate syn 99.9 5.1E-23 1.1E-27 205.2 32.1 330 24-397 49-397 (407)
90 TIGR01825 gly_Cac_T_rel pyrido 99.9 7.5E-23 1.6E-27 202.7 32.8 335 20-397 33-381 (385)
91 PRK08636 aspartate aminotransf 99.9 1.6E-22 3.4E-27 201.2 34.0 340 20-397 33-400 (403)
92 PRK08068 transaminase; Reviewe 99.9 1.1E-22 2.5E-27 201.4 32.9 319 20-372 32-370 (389)
93 PRK14807 histidinol-phosphate 99.9 8.7E-23 1.9E-27 199.3 31.5 319 20-395 22-350 (351)
94 PLN03032 serine decarboxylase; 99.9 2.4E-22 5.3E-27 194.6 33.7 317 32-393 35-372 (374)
95 PRK07309 aromatic amino acid a 99.9 2.7E-22 5.9E-27 198.7 34.6 341 20-397 30-388 (391)
96 PRK07550 hypothetical protein; 99.9 3E-22 6.4E-27 198.3 34.7 334 20-393 29-383 (386)
97 PRK08912 hypothetical protein; 99.9 2.3E-22 5.1E-27 199.1 33.8 338 21-396 27-385 (387)
98 TIGR03537 DapC succinyldiamino 99.9 1.4E-22 3E-27 197.9 31.7 320 31-393 13-349 (350)
99 PRK07777 aminotransferase; Val 99.9 2.7E-22 5.9E-27 198.6 34.2 341 20-395 24-384 (387)
100 PRK13393 5-aminolevulinate syn 99.9 1.4E-22 3.1E-27 201.7 32.3 330 25-398 49-397 (406)
101 KOG0257 Kynurenine aminotransf 99.9 1.8E-23 3.8E-28 195.5 23.8 301 3-330 14-344 (420)
102 cd06450 DOPA_deC_like DOPA dec 99.9 7.3E-24 1.6E-28 206.8 21.6 282 60-393 32-344 (345)
103 TIGR01141 hisC histidinol-phos 99.9 4.1E-23 8.9E-28 201.5 26.9 314 21-391 20-345 (346)
104 PRK09276 LL-diaminopimelate am 99.9 5.7E-22 1.2E-26 196.2 34.7 331 21-391 32-382 (385)
105 cd00611 PSAT_like Phosphoserin 99.9 1.2E-23 2.5E-28 205.3 22.3 328 23-394 1-353 (355)
106 PRK05387 histidinol-phosphate 99.9 8.9E-23 1.9E-27 199.7 28.5 318 20-396 24-352 (353)
107 PRK06348 aspartate aminotransf 99.9 3.6E-22 7.8E-27 197.4 32.9 333 20-393 29-381 (384)
108 PLN02822 serine palmitoyltrans 99.9 3.6E-22 7.8E-27 201.4 33.4 336 21-398 110-478 (481)
109 PLN02656 tyrosine transaminase 99.9 2E-22 4.4E-27 200.6 30.8 344 19-397 30-403 (409)
110 PRK05764 aspartate aminotransf 99.9 7.2E-22 1.6E-26 196.1 34.7 334 20-396 31-390 (393)
111 PRK13355 bifunctional HTH-doma 99.9 5.7E-22 1.2E-26 202.9 34.2 340 20-397 146-514 (517)
112 PRK07683 aminotransferase A; V 99.9 7.2E-22 1.6E-26 195.4 33.9 336 20-396 28-382 (387)
113 PRK04870 histidinol-phosphate 99.9 1.3E-22 2.8E-27 198.7 28.2 321 20-394 26-355 (356)
114 PLN00145 tyrosine/nicotianamin 99.9 3.7E-22 8E-27 199.5 31.9 343 21-398 53-425 (430)
115 TIGR01364 serC_1 phosphoserine 99.9 9.8E-23 2.1E-27 197.5 26.7 325 31-396 2-347 (349)
116 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.4E-22 2.9E-27 196.2 27.6 302 33-395 35-345 (346)
117 PRK08363 alanine aminotransfer 99.9 7.8E-22 1.7E-26 196.0 33.8 336 21-397 31-394 (398)
118 PRK01533 histidinol-phosphate 99.9 1.1E-22 2.4E-27 199.2 27.3 311 20-397 29-355 (366)
119 PLN02414 glycine dehydrogenase 99.9 2.3E-22 5E-27 213.3 31.3 299 69-402 571-912 (993)
120 TIGR01366 serC_3 phosphoserine 99.9 7.5E-23 1.6E-27 199.6 25.3 327 23-396 5-359 (361)
121 PRK07324 transaminase; Validat 99.9 2.9E-22 6.2E-27 197.1 29.5 288 73-397 69-370 (373)
122 PRK03317 histidinol-phosphate 99.9 5.6E-22 1.2E-26 195.0 31.2 321 21-396 27-363 (368)
123 PRK08153 histidinol-phosphate 99.9 5.6E-22 1.2E-26 194.9 31.0 320 22-397 34-365 (369)
124 PRK02731 histidinol-phosphate 99.9 4.3E-22 9.2E-27 195.9 30.0 319 20-396 32-365 (367)
125 PRK05937 8-amino-7-oxononanoat 99.9 4.1E-22 8.8E-27 195.9 29.8 320 25-398 8-351 (370)
126 PRK03158 histidinol-phosphate 99.9 2.2E-22 4.8E-27 197.3 27.8 314 21-394 30-358 (359)
127 PLN03026 histidinol-phosphate 99.9 4.8E-22 1E-26 195.9 30.1 318 20-394 52-379 (380)
128 PLN02187 rooty/superroot1 99.9 9.4E-22 2E-26 197.9 32.6 342 20-398 66-439 (462)
129 COG0079 HisC Histidinol-phosph 99.9 8.2E-22 1.8E-26 190.1 30.8 318 21-396 23-353 (356)
130 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1E-22 2.2E-27 199.5 24.7 316 34-392 5-363 (363)
131 PRK15481 transcriptional regul 99.9 4.7E-22 1E-26 199.6 29.8 275 89-396 143-430 (431)
132 PRK06855 aminotransferase; Val 99.9 1.2E-21 2.7E-26 196.1 32.7 344 21-397 33-429 (433)
133 TIGR02379 ECA_wecE TDP-4-keto- 99.9 4.3E-22 9.4E-27 195.1 28.6 319 31-395 8-375 (376)
134 PRK10534 L-threonine aldolase; 99.9 4E-22 8.7E-27 193.5 27.8 319 23-395 2-331 (333)
135 PRK09105 putative aminotransfe 99.9 1.1E-21 2.3E-26 192.6 30.3 311 21-395 44-368 (370)
136 PRK13237 tyrosine phenol-lyase 99.9 1.1E-21 2.4E-26 190.7 29.8 313 56-400 72-436 (460)
137 PTZ00377 alanine aminotransfer 99.9 2.4E-21 5.2E-26 196.7 33.3 330 33-398 90-476 (481)
138 TIGR01265 tyr_nico_aTase tyros 99.9 5.5E-21 1.2E-25 190.2 35.3 338 19-396 30-400 (403)
139 PRK00950 histidinol-phosphate 99.9 4.4E-22 9.5E-27 195.4 27.0 315 21-395 35-360 (361)
140 PRK03321 putative aminotransfe 99.9 5.4E-22 1.2E-26 194.1 26.9 314 21-396 23-350 (352)
141 PRK09148 aminotransferase; Val 99.9 8.4E-21 1.8E-25 188.8 35.7 340 20-398 30-391 (405)
142 PLN02450 1-aminocyclopropane-1 99.9 1.1E-21 2.5E-26 197.6 29.5 345 21-397 39-430 (468)
143 TIGR01264 tyr_amTase_E tyrosin 99.9 4.8E-21 1E-25 190.6 33.6 352 8-396 16-398 (401)
144 PLN02376 1-aminocyclopropane-1 99.9 1E-21 2.2E-26 198.7 28.9 343 21-398 47-439 (496)
145 PRK09147 succinyldiaminopimela 99.9 4.5E-21 9.8E-26 190.4 33.0 333 20-395 29-394 (396)
146 PLN00143 tyrosine/nicotianamin 99.9 5.4E-21 1.2E-25 190.3 33.3 340 19-397 31-404 (409)
147 PTZ00433 tyrosine aminotransfe 99.9 2.6E-21 5.5E-26 193.0 30.8 343 19-397 32-408 (412)
148 PRK00451 glycine dehydrogenase 99.9 7.1E-22 1.5E-26 199.3 27.0 290 71-395 117-446 (447)
149 PRK08056 threonine-phosphate d 99.9 2.2E-21 4.8E-26 189.8 29.7 318 21-396 21-354 (356)
150 PRK08175 aminotransferase; Val 99.9 1E-20 2.2E-25 187.8 34.7 337 20-396 29-388 (395)
151 PRK09265 aminotransferase AlaT 99.9 1.1E-20 2.5E-25 188.0 34.8 340 20-397 33-401 (404)
152 PRK15407 lipopolysaccharide bi 99.9 1.9E-21 4.2E-26 193.6 29.2 348 6-396 9-435 (438)
153 PRK05166 histidinol-phosphate 99.9 1.8E-21 4E-26 191.5 28.7 318 21-395 37-369 (371)
154 PRK06107 aspartate aminotransf 99.9 4E-21 8.7E-26 191.0 31.4 336 20-396 33-399 (402)
155 cd00615 Orn_deC_like Ornithine 99.9 5.5E-23 1.2E-27 195.5 16.9 222 70-309 63-293 (294)
156 TIGR03538 DapC_gpp succinyldia 99.9 9.4E-21 2E-25 188.0 33.0 331 20-393 28-391 (393)
157 PRK07590 L,L-diaminopimelate a 99.9 4.5E-21 9.7E-26 191.1 30.6 343 7-394 19-408 (409)
158 TIGR02618 tyr_phenol_ly tyrosi 99.9 1.6E-21 3.4E-26 189.2 25.0 315 54-400 63-429 (450)
159 KOG1360 5-aminolevulinate synt 99.9 7E-21 1.5E-25 175.6 26.5 336 21-398 171-525 (570)
160 PRK02610 histidinol-phosphate 99.9 1.4E-20 2.9E-25 185.4 30.7 321 22-396 30-370 (374)
161 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 1E-22 2.2E-27 197.0 15.1 267 70-353 70-400 (417)
162 PRK06836 aspartate aminotransf 99.9 5.1E-20 1.1E-24 182.6 34.8 330 22-398 35-392 (394)
163 PLN02231 alanine transaminase 99.9 1.3E-20 2.8E-25 191.7 31.2 341 21-397 130-527 (534)
164 cd00609 AAT_like Aspartate ami 99.9 2E-20 4.3E-25 182.6 30.5 297 63-392 37-349 (350)
165 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 6.6E-21 1.4E-25 187.5 27.0 318 32-395 9-374 (375)
166 PRK07568 aspartate aminotransf 99.9 6.8E-20 1.5E-24 182.2 34.3 335 21-397 31-392 (397)
167 PRK09275 aspartate aminotransf 99.9 1.1E-20 2.3E-25 189.9 28.0 342 21-399 101-519 (527)
168 PRK01688 histidinol-phosphate 99.9 2.7E-21 5.9E-26 188.7 23.3 310 22-391 30-350 (351)
169 PRK05367 glycine dehydrogenase 99.9 4E-20 8.6E-25 197.3 33.5 304 64-402 540-880 (954)
170 COG1167 ARO8 Transcriptional r 99.9 2.2E-20 4.7E-25 187.4 29.7 303 65-398 135-456 (459)
171 PRK04635 histidinol-phosphate 99.9 8.1E-21 1.8E-25 185.7 26.0 310 21-393 32-351 (354)
172 PRK14809 histidinol-phosphate 99.9 2.9E-20 6.2E-25 182.2 29.7 313 21-396 31-356 (357)
173 PRK07865 N-succinyldiaminopime 99.9 2.1E-20 4.5E-25 183.6 28.7 318 17-392 24-363 (364)
174 TIGR03539 DapC_actino succinyl 99.9 3.1E-20 6.8E-25 181.8 29.6 326 8-391 9-356 (357)
175 PRK15029 arginine decarboxylas 99.9 6.9E-21 1.5E-25 197.0 25.8 298 70-396 209-603 (755)
176 PRK07908 hypothetical protein; 99.9 4.2E-20 9.1E-25 180.4 30.0 316 19-396 21-346 (349)
177 PF00155 Aminotran_1_2: Aminot 99.9 9.1E-21 2E-25 186.3 25.5 292 64-391 46-363 (363)
178 PLN02672 methionine S-methyltr 99.9 2.6E-20 5.6E-25 198.1 30.3 334 20-396 697-1079(1082)
179 TIGR03801 asp_4_decarbox aspar 99.9 2E-20 4.4E-25 187.7 27.8 307 65-398 132-517 (521)
180 PLN02607 1-aminocyclopropane-1 99.9 4.9E-20 1.1E-24 184.4 30.5 345 22-398 49-438 (447)
181 PRK05968 hypothetical protein; 99.9 5.5E-21 1.2E-25 188.3 23.2 289 60-396 61-385 (389)
182 PRK06767 methionine gamma-lyas 99.9 4.3E-21 9.4E-26 189.1 22.4 291 60-396 59-384 (386)
183 TIGR01328 met_gam_lyase methio 99.9 9.3E-21 2E-25 186.7 24.6 225 51-314 50-281 (391)
184 PRK04781 histidinol-phosphate 99.9 2.4E-20 5.1E-25 182.9 27.4 284 72-395 65-361 (364)
185 PRK06358 threonine-phosphate d 99.9 5.4E-20 1.2E-24 179.8 29.6 315 22-395 21-353 (354)
186 PRK12566 glycine dehydrogenase 99.9 6.3E-20 1.4E-24 191.2 31.1 297 72-403 549-882 (954)
187 COG2008 GLY1 Threonine aldolas 99.9 1.8E-20 4E-25 173.3 24.0 319 27-395 5-341 (342)
188 PRK05839 hypothetical protein; 99.9 7.6E-20 1.7E-24 180.1 29.7 336 8-396 11-373 (374)
189 PRK08861 cystathionine gamma-s 99.9 1.4E-20 2.9E-25 184.3 23.8 213 60-311 51-270 (388)
190 TIGR00461 gcvP glycine dehydro 99.9 8.5E-20 1.8E-24 191.5 31.0 303 65-402 529-872 (939)
191 KOG0259 Tyrosine aminotransfer 99.9 1.5E-19 3.3E-24 166.3 28.0 327 31-396 78-432 (447)
192 PRK07392 threonine-phosphate d 99.9 1.5E-19 3.2E-24 177.3 30.1 317 21-396 23-358 (360)
193 KOG1359 Glycine C-acetyltransf 99.9 2.2E-20 4.8E-25 165.9 21.7 327 23-397 69-412 (417)
194 TIGR03542 DAPAT_plant LL-diami 99.9 2.7E-19 5.9E-24 177.9 31.5 334 20-394 33-401 (402)
195 PRK07504 O-succinylhomoserine 99.9 1.4E-20 3.1E-25 185.8 22.1 224 51-314 56-286 (398)
196 PRK04311 selenocysteine syntha 99.9 1.5E-19 3.3E-24 179.8 28.7 322 28-396 94-463 (464)
197 PRK07811 cystathionine gamma-s 99.9 3.8E-20 8.2E-25 182.3 24.0 216 60-314 59-282 (388)
198 PLN02880 tyrosine decarboxylas 99.9 9.5E-20 2.1E-24 183.6 27.2 314 62-398 118-485 (490)
199 PRK08133 O-succinylhomoserine 99.9 5E-20 1.1E-24 181.6 24.0 246 26-314 29-281 (390)
200 PRK08776 cystathionine gamma-s 99.9 6.8E-20 1.5E-24 180.9 24.9 213 60-311 58-277 (405)
201 TIGR01329 cysta_beta_ly_E cyst 99.9 6.5E-20 1.4E-24 180.0 24.5 288 60-397 45-375 (378)
202 PRK08064 cystathionine beta-ly 99.9 7E-20 1.5E-24 180.5 24.7 287 60-393 52-382 (390)
203 TIGR01324 cysta_beta_ly_B cyst 99.9 5E-20 1.1E-24 180.2 23.4 290 59-396 47-375 (377)
204 PRK06234 methionine gamma-lyas 99.9 6.8E-20 1.5E-24 181.2 24.2 293 60-397 62-397 (400)
205 PRK08045 cystathionine gamma-s 99.9 7E-20 1.5E-24 179.9 23.6 213 60-311 50-269 (386)
206 PLN02452 phosphoserine transam 99.9 4.3E-19 9.3E-24 172.0 28.4 336 20-396 6-362 (365)
207 PRK09257 aromatic amino acid a 99.9 1E-19 2.2E-24 180.6 24.6 331 20-395 26-396 (396)
208 PRK09440 avtA valine--pyruvate 99.9 6.2E-19 1.3E-23 176.3 29.8 343 20-397 30-411 (416)
209 PRK08574 cystathionine gamma-s 99.9 9.8E-20 2.1E-24 178.9 23.5 214 59-311 50-269 (385)
210 TIGR00474 selA seryl-tRNA(sec) 99.9 5.6E-19 1.2E-23 175.3 28.9 316 29-391 90-453 (454)
211 PLN02242 methionine gamma-lyas 99.9 1.4E-19 3E-24 179.3 24.5 224 60-319 74-305 (418)
212 TIGR03531 selenium_SpcS O-phos 99.9 4.7E-19 1E-23 174.5 27.9 310 65-394 104-443 (444)
213 PRK07503 methionine gamma-lyas 99.9 2E-19 4.3E-24 178.0 25.4 218 60-314 63-287 (403)
214 PRK07810 O-succinylhomoserine 99.9 9.5E-20 2E-24 179.9 22.9 217 60-314 68-291 (403)
215 PRK14808 histidinol-phosphate 99.9 5.7E-19 1.2E-23 171.1 27.8 303 20-393 19-333 (335)
216 PRK06425 histidinol-phosphate 99.9 2.5E-19 5.5E-24 173.5 25.3 301 21-395 17-331 (332)
217 TIGR03799 NOD_PanD_pyr putativ 99.9 2.6E-19 5.7E-24 180.6 25.9 306 62-389 125-517 (522)
218 PLN02263 serine decarboxylase 99.8 6.8E-18 1.5E-22 166.0 34.0 290 64-396 131-442 (470)
219 PRK07269 cystathionine gamma-s 99.8 1.7E-19 3.7E-24 175.7 22.6 226 51-319 45-278 (364)
220 cd00614 CGS_like CGS_like: Cys 99.8 3.2E-19 6.9E-24 175.1 24.6 215 60-312 38-258 (369)
221 PRK07050 cystathionine beta-ly 99.8 2.4E-19 5.2E-24 176.7 23.5 298 51-397 56-391 (394)
222 TIGR01325 O_suc_HS_sulf O-succ 99.8 2.6E-19 5.6E-24 176.1 23.6 220 51-311 45-270 (380)
223 PTZ00376 aspartate aminotransf 99.8 5.7E-19 1.2E-23 175.7 26.0 289 64-396 74-402 (404)
224 PLN02397 aspartate transaminas 99.8 5.9E-19 1.3E-23 176.2 26.2 265 92-397 124-421 (423)
225 PRK05613 O-acetylhomoserine am 99.8 3.4E-19 7.4E-24 176.8 24.0 191 25-245 36-232 (437)
226 PRK09028 cystathionine beta-ly 99.8 5.5E-19 1.2E-23 172.8 25.0 212 60-311 59-277 (394)
227 PRK03967 histidinol-phosphate 99.8 1.6E-18 3.4E-23 168.3 27.7 307 21-397 19-334 (337)
228 PRK08114 cystathionine beta-ly 99.8 6.7E-19 1.4E-23 171.7 24.9 214 59-311 59-280 (395)
229 PLN02590 probable tyrosine dec 99.8 2.7E-18 5.8E-23 173.1 29.8 313 61-397 165-532 (539)
230 PRK07505 hypothetical protein; 99.8 7.7E-18 1.7E-22 167.5 32.6 332 21-397 47-399 (402)
231 PRK13578 ornithine decarboxyla 99.8 3.3E-19 7.1E-24 182.8 23.2 299 70-396 178-564 (720)
232 TIGR01140 L_thr_O3P_dcar L-thr 99.8 1.6E-18 3.5E-23 167.8 26.7 301 20-391 17-329 (330)
233 TIGR02080 O_succ_thio_ly O-suc 99.8 5.6E-19 1.2E-23 173.3 23.7 212 60-311 49-268 (382)
234 PRK08247 cystathionine gamma-s 99.8 6.1E-19 1.3E-23 172.7 23.9 224 51-315 43-273 (366)
235 PRK08249 cystathionine gamma-s 99.8 7.3E-19 1.6E-23 173.4 24.0 213 60-311 62-280 (398)
236 KOG1368 Threonine aldolase [Am 99.8 1.5E-18 3.2E-23 154.7 22.8 324 22-395 23-366 (384)
237 PRK15400 lysine decarboxylase 99.8 5.6E-19 1.2E-23 180.9 23.0 292 70-396 199-558 (714)
238 COG1103 Archaea-specific pyrid 99.8 1.7E-18 3.8E-23 152.3 22.4 324 21-398 16-381 (382)
239 TIGR01365 serC_2 phosphoserine 99.8 2E-18 4.3E-23 167.4 25.1 297 59-395 33-371 (374)
240 COG3844 Kynureninase [Amino ac 99.8 5.4E-18 1.2E-22 153.2 25.4 329 31-397 42-402 (407)
241 PLN02509 cystathionine beta-ly 99.8 1.1E-18 2.4E-23 173.7 23.0 215 60-313 131-352 (464)
242 PRK00854 rocD ornithine--oxo-a 99.8 1.1E-17 2.3E-22 166.6 30.2 317 33-396 59-400 (401)
243 PRK15399 lysine decarboxylase 99.8 2.3E-18 4.9E-23 176.5 25.7 291 70-396 199-558 (713)
244 PRK05664 threonine-phosphate d 99.8 4.2E-18 9.2E-23 164.8 26.4 263 73-396 56-327 (330)
245 COG0076 GadB Glutamate decarbo 99.8 3.9E-18 8.4E-23 169.2 26.5 300 27-353 69-403 (460)
246 PRK06176 cystathionine gamma-s 99.8 1.6E-18 3.4E-23 170.1 22.9 219 51-311 41-266 (380)
247 PRK07582 cystathionine gamma-l 99.8 3.2E-18 7E-23 167.4 24.2 283 60-392 49-364 (366)
248 PRK06702 O-acetylhomoserine am 99.8 1.5E-18 3.3E-23 171.2 21.9 158 60-243 59-222 (432)
249 PRK07671 cystathionine beta-ly 99.8 1.9E-18 4.1E-23 169.5 22.4 215 60-313 48-269 (377)
250 PRK05939 hypothetical protein; 99.8 5E-18 1.1E-22 167.2 25.4 219 60-311 45-284 (397)
251 PRK07812 O-acetylhomoserine am 99.8 3.8E-18 8.1E-23 169.3 24.4 154 60-239 67-223 (436)
252 PRK06460 hypothetical protein; 99.8 6.9E-18 1.5E-22 165.6 25.8 213 60-311 43-261 (376)
253 PRK05967 cystathionine beta-ly 99.8 4.9E-18 1.1E-22 165.9 24.2 214 59-311 61-280 (395)
254 TIGR00707 argD acetylornithine 99.8 2.1E-17 4.5E-22 163.4 28.3 323 22-395 29-379 (379)
255 PRK08134 O-acetylhomoserine am 99.8 7.2E-18 1.6E-22 167.5 24.4 152 60-238 62-216 (433)
256 PRK06084 O-acetylhomoserine am 99.8 7.2E-18 1.6E-22 167.5 23.9 166 51-245 49-220 (425)
257 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.4E-18 3.1E-23 169.1 18.3 225 50-314 45-278 (386)
258 COG1003 GcvP Glycine cleavage 99.8 1.7E-17 3.7E-22 155.6 24.3 295 70-400 113-450 (496)
259 PRK06434 cystathionine gamma-l 99.8 5.7E-18 1.2E-22 165.3 22.1 212 59-311 61-278 (384)
260 PLN02368 alanine transaminase 99.8 1.2E-17 2.6E-22 165.1 24.6 243 64-330 109-396 (407)
261 PRK08248 O-acetylhomoserine am 99.8 9.4E-18 2E-22 166.8 23.7 159 60-245 62-226 (431)
262 PRK05994 O-acetylhomoserine am 99.8 1.5E-17 3.3E-22 165.5 24.8 156 61-243 62-223 (427)
263 PRK06959 putative threonine-ph 99.8 2.9E-17 6.2E-22 159.4 25.9 265 72-398 59-334 (339)
264 PRK08354 putative aminotransfe 99.8 6.1E-17 1.3E-21 155.4 27.5 291 21-394 9-309 (311)
265 PRK04073 rocD ornithine--oxo-a 99.8 9.3E-17 2E-21 159.4 29.2 307 32-395 57-395 (396)
266 KOG1357 Serine palmitoyltransf 99.8 8.9E-18 1.9E-22 157.8 20.1 324 26-394 150-499 (519)
267 TIGR02617 tnaA_trp_ase tryptop 99.8 8.3E-17 1.8E-21 154.9 27.2 335 32-400 55-444 (467)
268 COG0626 MetC Cystathionine bet 99.8 3.5E-17 7.5E-22 157.4 24.5 226 51-314 54-286 (396)
269 cd00610 OAT_like Acetyl ornith 99.8 9.8E-17 2.1E-21 160.5 28.8 327 32-395 53-413 (413)
270 PRK01278 argD acetylornithine 99.8 1.9E-16 4.1E-21 156.9 30.4 312 32-396 48-387 (389)
271 PRK03244 argD acetylornithine 99.8 2.1E-16 4.5E-21 157.2 30.3 312 33-398 61-395 (398)
272 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.7E-17 5.8E-22 163.7 23.1 160 60-246 55-219 (418)
273 PLN02414 glycine dehydrogenase 99.8 1.1E-16 2.3E-21 170.4 28.2 275 70-393 152-465 (993)
274 PRK08637 hypothetical protein; 99.8 5.7E-17 1.2E-21 160.5 24.4 276 89-396 71-385 (388)
275 PRK07049 methionine gamma-lyas 99.8 7.6E-17 1.6E-21 160.4 24.7 217 61-314 82-315 (427)
276 PTZ00125 ornithine aminotransf 99.8 6E-16 1.3E-20 154.1 30.4 318 32-398 48-396 (400)
277 PRK12462 phosphoserine aminotr 99.8 3.4E-16 7.3E-21 150.2 26.8 337 19-396 2-361 (364)
278 PRK02936 argD acetylornithine 99.8 4.5E-16 9.8E-21 153.7 27.0 313 32-395 46-377 (377)
279 COG1982 LdcC Arginine/lysine/o 99.8 2E-16 4.3E-21 156.0 22.8 296 70-393 74-404 (557)
280 PRK05367 glycine dehydrogenase 99.7 6.7E-16 1.5E-20 165.2 27.7 274 70-392 125-437 (954)
281 PRK02627 acetylornithine amino 99.7 1.9E-15 4.1E-20 150.3 29.3 313 33-397 57-394 (396)
282 TIGR01885 Orn_aminotrans ornit 99.7 4.3E-15 9.3E-20 147.8 31.4 310 32-395 54-400 (401)
283 TIGR03246 arg_catab_astC succi 99.7 6.1E-15 1.3E-19 146.2 30.3 311 32-397 52-395 (397)
284 COG4992 ArgD Ornithine/acetylo 99.7 8.4E-15 1.8E-19 138.7 29.0 318 32-398 59-399 (404)
285 PRK05093 argD bifunctional N-s 99.7 9E-15 1.9E-19 145.6 28.9 310 32-397 57-400 (403)
286 cd01494 AAT_I Aspartate aminot 99.7 2.3E-16 5E-21 137.1 15.4 163 71-245 5-170 (170)
287 KOG0256 1-aminocyclopropane-1- 99.7 6.4E-15 1.4E-19 137.3 25.5 281 90-396 149-460 (471)
288 PF00282 Pyridoxal_deC: Pyrido 99.7 3.4E-15 7.4E-20 145.7 24.7 241 61-318 74-362 (373)
289 COG2873 MET17 O-acetylhomoseri 99.7 1.2E-15 2.6E-20 140.7 19.4 184 23-237 27-213 (426)
290 PRK12381 bifunctional succinyl 99.7 1.7E-14 3.8E-19 143.5 26.9 318 32-398 56-400 (406)
291 PF01212 Beta_elim_lyase: Beta 99.7 5.4E-17 1.2E-21 152.3 5.9 252 27-317 3-276 (290)
292 PRK04260 acetylornithine amino 99.7 1.2E-13 2.7E-18 136.1 28.6 307 33-394 46-374 (375)
293 PRK03715 argD acetylornithine 99.6 3E-13 6.4E-18 133.7 29.0 313 32-397 53-393 (395)
294 KOG0053 Cystathionine beta-lya 99.6 7.6E-15 1.7E-19 139.4 16.6 214 59-310 74-293 (409)
295 PLN02624 ornithine-delta-amino 99.6 3.7E-13 8E-18 136.0 29.6 317 33-398 93-445 (474)
296 PLN00144 acetylornithine trans 99.6 1.1E-12 2.4E-17 129.2 31.4 316 31-397 31-380 (382)
297 TIGR00713 hemL glutamate-1-sem 99.6 7.3E-13 1.6E-17 132.8 30.3 314 31-396 64-421 (423)
298 PRK05964 adenosylmethionine--8 99.6 6.6E-13 1.4E-17 132.8 27.9 328 32-397 59-422 (423)
299 COG3977 Alanine-alpha-ketoisov 99.6 2.2E-12 4.8E-17 115.8 26.6 338 23-397 32-411 (417)
300 KOG0634 Aromatic amino acid am 99.6 1.3E-12 2.7E-17 123.1 26.1 314 58-398 96-467 (472)
301 PRK04612 argD acetylornithine 99.6 4.6E-12 9.9E-17 125.6 30.4 320 31-398 56-404 (408)
302 KOG1383 Glutamate decarboxylas 99.6 7.9E-13 1.7E-17 125.6 22.5 300 64-398 118-447 (491)
303 PF06838 Met_gamma_lyase: Meth 99.6 2.7E-13 5.9E-18 125.7 18.9 273 33-344 26-328 (403)
304 KOG0633 Histidinol phosphate a 99.6 4.2E-13 9.1E-18 118.0 19.0 278 79-393 82-373 (375)
305 TIGR03811 tyr_de_CO2_Ent tyros 99.6 1.7E-12 3.7E-17 132.6 26.5 232 62-311 119-475 (608)
306 COG1921 SelA Selenocysteine sy 99.6 4.8E-13 1E-17 126.7 20.2 237 20-289 20-273 (395)
307 TIGR03372 putres_am_tran putre 99.6 8.6E-12 1.9E-16 124.3 30.0 320 32-395 92-442 (442)
308 TIGR00461 gcvP glycine dehydro 99.5 2.7E-12 5.8E-17 135.6 27.3 274 71-392 114-426 (939)
309 PLN02760 4-aminobutyrate:pyruv 99.5 2.4E-11 5.2E-16 123.2 33.3 323 32-398 106-492 (504)
310 PRK08117 4-aminobutyrate amino 99.5 1.4E-11 3E-16 123.7 30.8 330 32-398 60-430 (433)
311 PRK08088 4-aminobutyrate amino 99.5 1.8E-11 3.9E-16 122.5 30.7 331 32-397 58-423 (425)
312 PRK13360 omega amino acid--pyr 99.5 3.2E-11 6.9E-16 120.8 32.3 330 31-397 62-440 (442)
313 COG1448 TyrB Aspartate/tyrosin 99.5 3.3E-12 7.2E-17 119.2 23.1 324 21-394 27-395 (396)
314 PRK09792 4-aminobutyrate trans 99.5 3E-11 6.6E-16 120.5 31.4 328 32-396 57-420 (421)
315 PRK12403 putative aminotransfe 99.5 3.1E-11 6.7E-16 121.5 31.6 322 32-398 71-453 (460)
316 COG0160 GabT 4-aminobutyrate a 99.5 5.3E-11 1.2E-15 116.3 31.9 329 32-397 73-445 (447)
317 PRK11522 putrescine--2-oxoglut 99.5 2.1E-11 4.6E-16 122.4 29.5 323 32-398 99-452 (459)
318 PRK08360 4-aminobutyrate amino 99.5 5.9E-11 1.3E-15 118.9 31.9 330 32-398 58-427 (443)
319 PRK04013 argD acetylornithine/ 99.5 3.3E-11 7.1E-16 117.3 28.6 305 31-398 40-361 (364)
320 COG0001 HemL Glutamate-1-semia 99.5 1.2E-10 2.6E-15 111.8 31.4 318 33-398 71-429 (432)
321 PRK00062 glutamate-1-semialdeh 99.5 2.2E-11 4.7E-16 121.9 27.6 328 21-397 51-424 (426)
322 KOG2040 Glycine dehydrogenase 99.5 7.2E-12 1.6E-16 122.8 22.7 293 73-403 589-924 (1001)
323 PRK09221 beta alanine--pyruvat 99.5 7.7E-11 1.7E-15 118.1 30.7 321 32-397 66-443 (445)
324 PRK07495 4-aminobutyrate amino 99.5 3.2E-10 7E-15 113.1 34.8 330 32-398 57-422 (425)
325 PRK07986 adenosylmethionine--8 99.5 8.8E-11 1.9E-15 116.9 30.7 320 32-397 60-423 (428)
326 PRK06777 4-aminobutyrate amino 99.5 1.6E-10 3.5E-15 115.3 32.6 321 32-396 57-420 (421)
327 PRK06058 4-aminobutyrate amino 99.5 2.6E-10 5.6E-15 114.6 34.0 329 32-396 73-441 (443)
328 TIGR02407 ectoine_ectB diamino 99.5 2E-10 4.4E-15 114.3 32.4 330 31-396 51-411 (412)
329 PRK09264 diaminobutyrate--2-ox 99.5 1.2E-10 2.6E-15 116.4 30.3 332 32-398 56-417 (425)
330 PRK06173 adenosylmethionine--8 99.5 1.5E-10 3.1E-15 115.5 30.2 320 32-397 61-425 (429)
331 PRK06541 hypothetical protein; 99.5 1.3E-10 2.9E-15 116.8 30.1 216 159-397 208-455 (460)
332 TIGR00508 bioA adenosylmethion 99.5 1E-10 2.2E-15 116.8 28.8 327 31-396 61-425 (427)
333 PF02347 GDC-P: Glycine cleava 99.4 2.6E-11 5.6E-16 117.9 23.2 273 71-391 115-429 (429)
334 PRK06105 aminotransferase; Pro 99.4 2.4E-10 5.3E-15 115.0 30.7 324 32-398 65-450 (460)
335 COG3033 TnaA Tryptophanase [Am 99.4 4.2E-11 9.2E-16 110.2 22.4 309 73-399 86-446 (471)
336 PRK08593 4-aminobutyrate amino 99.4 4.3E-10 9.4E-15 112.9 31.8 329 33-398 60-430 (445)
337 TIGR00700 GABAtrnsam 4-aminobu 99.4 3.7E-10 8.1E-15 112.9 31.3 328 31-396 49-419 (420)
338 PRK05769 4-aminobutyrate amino 99.4 4.4E-10 9.5E-15 112.7 31.3 327 33-397 72-439 (441)
339 PRK00615 glutamate-1-semialdeh 99.4 6.5E-10 1.4E-14 110.8 32.2 320 32-398 70-429 (433)
340 PRK06062 hypothetical protein; 99.4 4.8E-10 1E-14 112.7 30.3 319 33-398 71-446 (451)
341 PRK07046 aminotransferase; Val 99.4 5.6E-10 1.2E-14 112.1 30.5 314 33-397 93-450 (453)
342 PF03841 SelA: L-seryl-tRNA se 99.4 4.8E-13 1E-17 125.7 7.8 243 30-310 16-295 (367)
343 PRK05630 adenosylmethionine--8 99.4 7.3E-10 1.6E-14 110.4 30.2 211 159-397 191-420 (422)
344 PRK06918 4-aminobutyrate amino 99.4 1.3E-09 2.7E-14 110.0 31.2 325 32-398 71-444 (451)
345 PRK06943 adenosylmethionine--8 99.4 2E-09 4.4E-14 108.1 32.3 322 32-398 71-447 (453)
346 PRK07678 aminotransferase; Val 99.4 1.7E-09 3.8E-14 108.7 31.4 217 160-397 201-449 (451)
347 COG0403 GcvP Glycine cleavage 99.4 5.1E-10 1.1E-14 105.9 25.5 278 72-394 126-447 (450)
348 PLN02482 glutamate-1-semialdeh 99.4 3.1E-09 6.6E-14 107.0 32.9 314 33-396 117-472 (474)
349 PRK06082 4-aminobutyrate amino 99.4 3.6E-09 7.7E-14 106.5 32.5 321 32-398 88-452 (459)
350 TIGR00709 dat 2,4-diaminobutyr 99.3 2.9E-09 6.3E-14 107.0 31.2 204 169-398 206-436 (442)
351 PRK05965 hypothetical protein; 99.3 3.9E-09 8.4E-14 106.4 32.1 331 33-398 64-448 (459)
352 PRK07480 putative aminotransfe 99.3 4.8E-09 1.1E-13 105.5 31.9 212 159-398 206-449 (456)
353 KOG1358 Serine palmitoyltransf 99.3 1.2E-10 2.6E-15 108.4 18.6 335 21-396 95-464 (467)
354 PRK07482 hypothetical protein; 99.3 4.4E-09 9.5E-14 106.0 31.5 217 157-398 205-455 (461)
355 PRK12389 glutamate-1-semialdeh 99.3 3.5E-09 7.5E-14 106.0 30.0 306 33-396 71-426 (428)
356 PRK05639 4-aminobutyrate amino 99.3 1.1E-08 2.4E-13 102.8 33.3 330 32-398 70-444 (457)
357 PRK06149 hypothetical protein; 99.3 5.6E-09 1.2E-13 114.4 33.4 205 169-397 744-970 (972)
358 PRK07481 hypothetical protein; 99.3 5.2E-09 1.1E-13 105.2 30.7 201 169-397 213-445 (449)
359 PRK06209 glutamate-1-semialdeh 99.3 2.1E-09 4.5E-14 107.7 26.9 308 32-398 65-406 (431)
360 PRK07483 hypothetical protein; 99.3 5.4E-09 1.2E-13 104.9 29.6 221 159-398 186-438 (443)
361 PRK06916 adenosylmethionine--8 99.3 7.7E-09 1.7E-13 104.2 30.8 322 31-398 72-456 (460)
362 PRK06917 hypothetical protein; 99.3 7.5E-09 1.6E-13 103.9 30.3 331 31-398 47-438 (447)
363 PRK08742 adenosylmethionine--8 99.3 1.2E-08 2.6E-13 102.8 31.8 215 157-398 222-468 (472)
364 KOG0258 Alanine aminotransfera 99.3 2.8E-09 6.1E-14 99.4 24.8 304 32-371 87-452 (475)
365 PRK07030 adenosylmethionine--8 99.3 1.1E-08 2.3E-13 103.3 30.3 214 158-398 201-447 (466)
366 COG4100 Cystathionine beta-lya 99.3 8.8E-10 1.9E-14 99.2 19.2 229 64-317 67-313 (416)
367 COG1932 SerC Phosphoserine ami 99.2 1.3E-09 2.7E-14 101.7 20.7 332 22-396 6-362 (365)
368 KOG0629 Glutamate decarboxylas 99.2 1E-09 2.2E-14 103.4 19.6 237 66-318 141-421 (510)
369 PRK06938 diaminobutyrate--2-ox 99.2 2.1E-08 4.5E-13 101.1 30.6 216 157-398 214-461 (464)
370 PRK07036 hypothetical protein; 99.2 2E-08 4.3E-13 101.3 30.3 213 159-398 207-453 (466)
371 PRK06148 hypothetical protein; 99.2 2.2E-08 4.8E-13 109.9 32.1 321 33-397 640-1010(1013)
372 TIGR03251 LAT_fam L-lysine 6-t 99.2 6.1E-09 1.3E-13 104.3 25.7 209 158-393 205-430 (431)
373 KOG1402 Ornithine aminotransfe 99.2 2.4E-08 5.2E-13 91.3 26.6 314 32-396 76-426 (427)
374 COG0161 BioA Adenosylmethionin 99.2 3.1E-08 6.7E-13 96.6 29.0 215 158-398 200-444 (449)
375 TIGR00699 GABAtrns_euk 4-amino 99.2 1.2E-08 2.6E-13 102.1 26.3 209 157-395 237-464 (464)
376 PRK06931 diaminobutyrate--2-ox 99.2 1.2E-07 2.5E-12 95.7 33.5 203 170-398 226-455 (459)
377 KOG3846 L-kynurenine hydrolase 99.2 1.8E-09 3.9E-14 97.6 17.9 340 31-398 78-462 (465)
378 PF05889 SLA_LP_auto_ag: Solub 99.2 9.2E-10 2E-14 104.6 16.6 297 74-396 64-389 (389)
379 PF12897 Aminotran_MocR: Alani 99.1 7.1E-08 1.5E-12 90.8 26.1 343 21-398 23-416 (425)
380 PRK12566 glycine dehydrogenase 99.1 2.2E-08 4.8E-13 105.8 24.5 268 71-392 129-439 (954)
381 KOG0628 Aromatic-L-amino-acid/ 99.1 2E-08 4.3E-13 95.9 21.4 316 60-398 107-472 (511)
382 KOG1404 Alanine-glyoxylate ami 99.0 2.4E-07 5.1E-12 87.0 23.2 180 186-391 235-432 (442)
383 PLN02974 adenosylmethionine-8- 99.0 4E-07 8.7E-12 96.8 27.3 214 159-395 567-816 (817)
384 PRK08297 L-lysine aminotransfe 98.8 3.3E-07 7.2E-12 92.0 19.3 209 158-397 212-441 (443)
385 KOG1401 Acetylornithine aminot 98.8 4.8E-06 1E-10 78.9 24.4 247 32-310 73-347 (433)
386 KOG1403 Predicted alanine-glyo 98.7 9.2E-06 2E-10 73.7 21.1 287 88-397 104-437 (452)
387 KOG1411 Aspartate aminotransfe 98.6 8.9E-07 1.9E-11 81.7 13.7 319 31-396 70-424 (427)
388 PF00202 Aminotran_3: Aminotra 98.6 4.8E-06 1E-10 80.8 19.4 254 32-310 33-315 (339)
389 KOG1412 Aspartate aminotransfe 98.5 3.1E-05 6.6E-10 70.8 19.8 274 88-398 101-406 (410)
390 KOG1405 4-aminobutyrate aminot 98.1 8E-05 1.7E-09 69.3 14.7 207 157-396 254-482 (484)
391 KOG2790 Phosphoserine aminotra 98.0 0.00017 3.8E-09 65.2 13.8 332 21-396 7-367 (370)
392 PF04864 Alliinase_C: Allinase 98.0 0.00011 2.5E-09 68.6 12.7 283 64-393 45-361 (363)
393 KOG2040 Glycine dehydrogenase 97.8 0.0065 1.4E-07 61.2 22.6 273 72-392 169-478 (1001)
394 KOG3843 Predicted serine hydro 97.6 0.0028 6E-08 57.0 14.7 112 153-272 138-261 (432)
395 PLN02994 1-aminocyclopropane-1 97.2 0.00083 1.8E-08 56.9 6.5 54 65-122 95-153 (153)
396 KOG0630 Predicted pyridoxal-de 79.7 24 0.00051 35.4 10.8 92 154-247 272-376 (838)
397 PRK12595 bifunctional 3-deoxy- 73.4 10 0.00022 37.0 6.7 57 153-209 232-299 (360)
398 PRK13397 3-deoxy-7-phosphohept 73.0 11 0.00025 34.5 6.4 57 153-209 129-196 (250)
399 cd02067 B12-binding B12 bindin 69.5 15 0.00033 29.2 6.0 42 156-197 37-78 (119)
400 cd02072 Glm_B12_BD B12 binding 69.0 13 0.00029 30.3 5.4 53 141-198 27-79 (128)
401 PRK13396 3-deoxy-7-phosphohept 67.5 12 0.00026 36.2 5.6 56 155-210 218-284 (352)
402 PRK02261 methylaspartate mutas 66.9 20 0.00044 29.6 6.2 52 141-197 31-82 (137)
403 COG1504 Uncharacterized conser 65.9 14 0.00031 28.9 4.6 49 154-203 47-95 (121)
404 TIGR01501 MthylAspMutase methy 65.0 17 0.00036 30.0 5.2 54 140-198 28-81 (134)
405 cd05126 Mth938 Mth938 domain. 64.9 27 0.00059 28.0 6.4 50 155-205 45-94 (117)
406 COG1105 FruK Fructose-1-phosph 64.8 19 0.0004 34.3 6.2 54 153-206 108-168 (310)
407 COG3010 NanE Putative N-acetyl 64.8 26 0.00057 30.9 6.5 71 156-232 86-157 (229)
408 PF04131 NanE: Putative N-acet 64.7 23 0.0005 30.9 6.2 72 155-232 51-122 (192)
409 TIGR01361 DAHP_synth_Bsub phos 61.5 25 0.00055 32.6 6.5 57 153-209 139-206 (260)
410 PF02310 B12-binding: B12 bind 59.1 17 0.00038 28.8 4.4 51 156-206 38-90 (121)
411 TIGR02370 pyl_corrinoid methyl 56.7 31 0.00067 30.5 6.0 61 140-205 111-175 (197)
412 cd02070 corrinoid_protein_B12- 55.9 31 0.00067 30.6 5.9 61 140-205 109-173 (201)
413 cd02069 methionine_synthase_B1 54.2 29 0.00064 31.1 5.4 60 140-204 115-176 (213)
414 cd02071 MM_CoA_mut_B12_BD meth 53.7 37 0.00081 27.2 5.5 50 142-196 28-77 (122)
415 TIGR03586 PseI pseudaminic aci 51.8 44 0.00096 32.1 6.5 56 153-210 141-205 (327)
416 COG2870 RfaE ADP-heptose synth 48.7 62 0.0014 31.8 6.8 48 157-204 129-178 (467)
417 COG1435 Tdk Thymidine kinase [ 48.4 1.2E+02 0.0027 26.7 8.0 97 93-202 14-115 (201)
418 COG2876 AroA 3-deoxy-D-arabino 47.3 40 0.00087 31.0 5.1 45 165-209 176-226 (286)
419 TIGR02026 BchE magnesium-proto 45.1 46 0.001 34.2 5.9 53 154-207 48-102 (497)
420 KOG4759 Ribosome recycling fac 44.7 2.2E+02 0.0048 26.2 9.3 52 336-400 155-206 (263)
421 TIGR00640 acid_CoA_mut_C methy 44.4 63 0.0014 26.5 5.5 52 141-197 30-81 (132)
422 cd05560 Xcc1710_like Xcc1710_l 43.3 1.1E+02 0.0023 24.2 6.5 49 155-205 39-87 (109)
423 TIGR01362 KDO8P_synth 3-deoxy- 42.7 53 0.0011 30.2 5.1 55 153-208 124-186 (258)
424 cd00248 Mth938-like Mth938-lik 42.2 1.6E+02 0.0034 23.2 7.3 50 155-205 38-87 (109)
425 PRK13398 3-deoxy-7-phosphohept 41.6 37 0.0008 31.6 4.1 54 156-209 145-208 (266)
426 COG4566 TtrR Response regulato 40.9 91 0.002 27.3 6.0 27 324-350 51-77 (202)
427 smart00642 Aamy Alpha-amylase 40.8 20 0.00044 30.7 2.2 27 179-205 65-91 (166)
428 cd00984 DnaB_C DnaB helicase C 40.6 97 0.0021 28.0 6.9 48 155-202 105-168 (242)
429 PRK12457 2-dehydro-3-deoxyphos 39.7 70 0.0015 29.8 5.5 57 153-209 138-203 (281)
430 PRK13602 putative ribosomal pr 36.8 63 0.0014 24.0 4.0 44 158-203 16-59 (82)
431 PLN02672 methionine S-methyltr 36.7 6.2E+02 0.013 28.9 13.1 51 159-209 517-569 (1082)
432 PRK09375 quinolinate synthetas 36.5 3.9E+02 0.0085 25.6 11.4 46 105-179 84-129 (319)
433 COG3414 SgaB Phosphotransferas 35.2 60 0.0013 24.8 3.7 69 171-245 3-74 (93)
434 PRK00945 acetyl-CoA decarbonyl 34.4 2.2E+02 0.0049 24.5 7.5 65 154-218 20-84 (171)
435 cd02065 B12-binding_like B12 b 33.9 92 0.002 24.6 5.0 52 156-207 37-90 (125)
436 PLN03033 2-dehydro-3-deoxyphos 33.5 1.3E+02 0.0029 28.1 6.3 55 152-207 137-199 (290)
437 PF02603 Hpr_kinase_N: HPr Ser 33.4 60 0.0013 26.4 3.7 43 156-203 65-111 (127)
438 PRK09441 cytoplasmic alpha-amy 32.8 29 0.00063 35.5 2.2 28 178-205 75-102 (479)
439 COG2204 AtoC Response regulato 32.6 1E+02 0.0022 31.2 5.8 127 302-440 18-162 (464)
440 COG1646 Predicted phosphate-bi 32.5 1.8E+02 0.0038 26.5 6.6 57 148-205 21-78 (240)
441 PRK14622 hypothetical protein; 31.7 1.1E+02 0.0024 23.8 4.8 42 381-447 60-101 (103)
442 PF14639 YqgF: Holliday-juncti 30.8 39 0.00084 28.4 2.2 43 155-197 49-91 (150)
443 PRK13601 putative L7Ae-like ri 30.8 90 0.0019 23.2 3.9 44 159-204 14-57 (82)
444 TIGR00789 flhB_rel flhB C-term 30.6 44 0.00095 24.9 2.2 20 186-205 29-48 (82)
445 PF00128 Alpha-amylase: Alpha 30.4 23 0.00049 33.3 0.9 27 179-205 47-73 (316)
446 TIGR01768 GGGP-family geranylg 30.3 1.3E+02 0.0028 27.2 5.6 46 156-202 15-60 (223)
447 PF13378 MR_MLE_C: Enolase C-t 30.3 58 0.0013 25.4 3.1 50 155-204 4-53 (111)
448 smart00481 POLIIIAc DNA polyme 30.1 1.9E+02 0.0041 20.0 6.4 47 154-202 13-59 (67)
449 COG2877 KdsA 3-deoxy-D-manno-o 29.0 83 0.0018 28.5 4.0 40 168-208 158-201 (279)
450 PF11823 DUF3343: Protein of u 28.7 1.5E+02 0.0032 21.2 4.8 49 335-393 13-61 (73)
451 COG1091 RfbD dTDP-4-dehydrorha 28.1 1.4E+02 0.0031 28.0 5.7 47 155-202 36-97 (281)
452 PF01248 Ribosomal_L7Ae: Ribos 28.1 1.3E+02 0.0028 22.7 4.7 46 158-205 20-66 (95)
453 PRK05198 2-dehydro-3-deoxyphos 27.3 1.1E+02 0.0023 28.4 4.5 55 153-208 132-194 (264)
454 TIGR00735 hisF imidazoleglycer 27.2 85 0.0018 28.9 4.1 48 152-199 205-252 (254)
455 PF14258 DUF4350: Domain of un 27.1 1.4E+02 0.003 21.0 4.3 52 337-392 8-61 (70)
456 PRK06683 hypothetical protein; 27.1 1.1E+02 0.0024 22.7 3.9 44 159-204 17-60 (82)
457 COG1066 Sms Predicted ATP-depe 27.1 1.5E+02 0.0032 29.6 5.6 48 155-202 154-215 (456)
458 PRK08673 3-deoxy-7-phosphohept 27.0 1.2E+02 0.0026 29.4 5.1 56 155-210 210-275 (335)
459 KOG2865 NADH:ubiquinone oxidor 26.8 5.6E+02 0.012 24.3 9.0 101 90-205 66-176 (391)
460 cd00532 MGS-like MGS-like doma 26.2 1.5E+02 0.0034 23.2 4.9 46 160-205 58-107 (112)
461 COG2099 CobK Precorrin-6x redu 26.1 1.3E+02 0.0028 27.7 4.8 24 183-206 52-75 (257)
462 PRK04169 geranylgeranylglycery 25.8 1.5E+02 0.0033 26.9 5.3 53 149-203 14-66 (232)
463 PRK07315 fructose-bisphosphate 25.5 99 0.0022 29.3 4.2 43 157-200 88-133 (293)
464 PF02571 CbiJ: Precorrin-6x re 25.4 60 0.0013 29.9 2.7 39 157-201 54-97 (249)
465 COG0296 GlgB 1,4-alpha-glucan 24.5 61 0.0013 34.1 2.8 31 176-206 206-236 (628)
466 PRK06806 fructose-bisphosphate 24.3 1.2E+02 0.0026 28.5 4.5 50 156-206 85-137 (281)
467 TIGR01769 GGGP geranylgeranylg 24.1 1.3E+02 0.0028 26.8 4.5 54 149-203 5-59 (205)
468 COG0718 Uncharacterized protei 24.1 1.9E+02 0.004 22.7 4.7 41 381-447 64-104 (105)
469 cd03315 MLE_like Muconate lact 23.9 1.2E+02 0.0027 27.9 4.6 50 154-203 188-237 (265)
470 PRK01018 50S ribosomal protein 23.8 1.4E+02 0.0031 22.9 4.2 43 158-202 21-63 (99)
471 COG0434 SgcQ Predicted TIM-bar 23.7 2E+02 0.0043 26.3 5.4 47 157-203 164-211 (263)
472 COG0108 RibB 3,4-dihydroxy-2-b 23.6 1.6E+02 0.0036 26.0 4.8 35 168-202 155-190 (203)
473 PF00265 TK: Thymidine kinase; 23.0 3.3E+02 0.0073 23.4 6.7 98 93-203 11-109 (176)
474 PRK00153 hypothetical protein; 22.7 1.8E+02 0.0039 22.6 4.5 42 381-447 62-103 (104)
475 TIGR00421 ubiX_pad polyprenyl 22.6 2.9E+02 0.0064 24.0 6.3 65 20-84 112-176 (181)
476 KOG2792 Putative cytochrome C 22.6 1.2E+02 0.0025 28.0 3.8 16 185-200 211-226 (280)
477 CHL00073 chlN photochlorophyll 22.5 1.4E+02 0.0031 30.2 4.9 46 157-202 81-133 (457)
478 PRK08185 hypothetical protein; 22.5 1.2E+02 0.0027 28.4 4.2 44 156-200 79-125 (283)
479 PRK14625 hypothetical protein; 22.5 2.5E+02 0.0055 22.2 5.3 42 381-447 61-104 (109)
480 PRK05678 succinyl-CoA syntheta 22.3 1.5E+02 0.0033 28.0 4.8 50 158-211 79-128 (291)
481 PF09651 Cas_APE2256: CRISPR-a 22.3 1.7E+02 0.0037 24.1 4.5 44 4-47 3-49 (136)
482 TIGR00250 RNAse_H_YqgF RNAse H 22.3 2.8E+02 0.006 22.6 5.8 51 155-205 34-92 (130)
483 PF05184 SapB_1: Saposin-like 22.3 1.9E+02 0.0041 17.4 5.0 17 427-443 23-39 (39)
484 PRK05583 ribosomal protein L7A 22.3 1.9E+02 0.0041 22.6 4.6 44 158-203 22-65 (104)
485 PRK08057 cobalt-precorrin-6x r 22.1 83 0.0018 29.0 2.9 43 154-202 49-97 (248)
486 PRK07714 hypothetical protein; 22.1 1.9E+02 0.0042 22.2 4.6 43 158-202 23-65 (100)
487 PF03102 NeuB: NeuB family; I 22.0 1.7E+02 0.0038 26.8 4.9 48 153-200 120-175 (241)
488 PF13380 CoA_binding_2: CoA bi 21.9 2.6E+02 0.0056 22.1 5.5 41 159-205 70-110 (116)
489 TIGR01019 sucCoAalpha succinyl 21.8 1.7E+02 0.0036 27.7 4.9 50 158-211 77-126 (286)
490 PTZ00106 60S ribosomal protein 21.7 1.6E+02 0.0034 23.2 4.0 44 158-203 30-73 (108)
491 PF05690 ThiG: Thiazole biosyn 21.4 2.2E+02 0.0048 25.9 5.3 59 139-204 121-182 (247)
492 PF03652 UPF0081: Uncharacteri 21.2 2.3E+02 0.0049 23.3 5.1 54 153-206 35-97 (135)
493 PRK00109 Holliday junction res 21.1 2.8E+02 0.0062 22.8 5.7 52 155-206 40-99 (138)
494 cd04736 MDH_FMN Mandelate dehy 21.0 2.8E+02 0.0061 27.1 6.4 50 154-204 243-296 (361)
495 PRK07283 hypothetical protein; 20.7 1.8E+02 0.004 22.3 4.2 42 158-201 23-64 (98)
496 cd03319 L-Ala-DL-Glu_epimerase 20.7 1.4E+02 0.003 28.5 4.3 49 155-203 237-285 (316)
497 COG1954 GlpP Glycerol-3-phosph 20.3 1.7E+02 0.0037 25.1 4.1 46 157-206 12-59 (181)
498 PLN00125 Succinyl-CoA ligase [ 20.3 2.1E+02 0.0045 27.2 5.3 51 158-211 83-133 (300)
499 PF01904 DUF72: Protein of unk 20.3 3.7E+02 0.0081 24.2 6.8 70 327-396 122-202 (230)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-104 Score=713.71 Aligned_cols=446 Identities=69% Similarity=1.131 Sum_probs=429.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|.+.|||++++|++|.+||+.+|+||||||+++.+|++|++++++|+|+|||||.|||+|++++|++|.+|++|..+.|+
T Consensus 21 l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ 100 (477)
T KOG2467|consen 21 LEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG 100 (477)
T ss_pred hhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHH
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~ 160 (447)
++++.|++|||+.||+.||++++.++++|+|+|+.+++++|||++|||++..++++....+|+..||.+|+.+|.||+|.
T Consensus 101 ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~ 180 (477)
T KOG2467|consen 101 LDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDK 180 (477)
T ss_pred CCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCc
Q 013217 161 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 240 (447)
Q Consensus 161 l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG 240 (447)
|++....++||+||++.|.|++.+|++++++||++.|+++++|+||.+|+++.++.++||.+||||++++||+|+|||||
T Consensus 181 Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsLRGPRg~ 260 (477)
T KOG2467|consen 181 LEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSLRGPRGA 260 (477)
T ss_pred HHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccccCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCc---------chhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC
Q 013217 241 MIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 241 ~i~~~~~~~---------~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (447)
+|+.+++.. +.+++.++|+.++||+.||+||+|.|+++|+||+++.+++|++|.+++.+|++.|+++|.+.
T Consensus 261 mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~ 340 (477)
T KOG2467|consen 261 MIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR 340 (477)
T ss_pred eEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999998632 35789999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 312 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 312 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
|++++++|||+|+++||+++.|+++..+++.|+..+|.+|++++|||.++..++|||+|++++|+||+.|+|+++++++|
T Consensus 341 Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi 420 (477)
T KOG2467|consen 341 GYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFI 420 (477)
T ss_pred CceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 013217 392 HEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 447 (447)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 447 (447)
.++++....+|...++++++||++.+.++. ...+.+.++|++|.+|+.+||+|+|
T Consensus 421 ~~av~i~~~~~~~~~~~~lkdf~~~~~~~~-~~~~~v~~Lr~~Ve~fa~~fp~pg~ 475 (477)
T KOG2467|consen 421 DRAVKIALEIQKEAGGKKLKDFKKFLSENK-VMSEEVAELRKRVEEFAGQFPMPGF 475 (477)
T ss_pred HHHHHHHHHHHhhcccchHHHHHHHhccCc-hhHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999998887799999999987543 2235788999999999999999986
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-100 Score=700.43 Aligned_cols=405 Identities=55% Similarity=0.856 Sum_probs=391.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC
Q 013217 2 QACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 81 (447)
Q Consensus 2 ~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~ 81 (447)
.+.||+|+++|.+|..||+++|+||||||++|++|++|+++.|+|+|+|||||.|||+||+++|++|.+|+++++++||+
T Consensus 8 ~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga 87 (413)
T COG0112 8 ADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA 87 (413)
T ss_pred HhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHH
Q 013217 82 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 161 (447)
Q Consensus 82 ~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l 161 (447)
+. +||||+||++||.+++.+|++|||+|+.+++.||||++|+. +++++|.+|++++|++|++++.||+|++
T Consensus 88 ~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDyD~~ 158 (413)
T COG0112 88 EY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDYDEV 158 (413)
T ss_pred Cc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCHHHH
Confidence 97 69999999999999999999999999999999999999994 6789999999999999999999999999
Q ss_pred HHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCce
Q 013217 162 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 241 (447)
Q Consensus 162 ~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG~ 241 (447)
++.+.++|||+|+++.|.|++.+|++++++||+++|++|++|+||.+|+++.|.+++|+++||++++|+||||+|||||+
T Consensus 159 ~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG~ 238 (413)
T COG0112 159 EKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGGI 238 (413)
T ss_pred HHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
|+++++ ++.+++++++||+.||+|++|.|||+++|++++++++|++|.+++.+|++.|++.|.+.|+++++++|+
T Consensus 239 Il~~~e-----el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTd 313 (413)
T COG0112 239 ILTNDE-----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTD 313 (413)
T ss_pred EEeccH-----HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCcc
Confidence 999985 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC-CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
+|++++|+++.++++..++..|++.||.+|+|.+|+|+ +|+.++|||||++++|+|||+++||++++++|.+++....
T Consensus 314 nHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~- 392 (413)
T COG0112 314 NHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK- 392 (413)
T ss_pred ceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc-
Confidence 99999999977889999999999999999999999997 7899999999999999999999999999999999998531
Q ss_pred HHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 013217 401 AKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 446 (447)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 446 (447)
...+++|++|.+||++||++.
T Consensus 393 -------------------------~~~~~vk~~V~~l~~~fp~y~ 413 (413)
T COG0112 393 -------------------------DVPAEVKEEVAELCRRFPLYK 413 (413)
T ss_pred -------------------------hhHHHHHHHHHHHHHhCCCCC
Confidence 157899999999999999974
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=4.6e-92 Score=688.15 Aligned_cols=441 Identities=56% Similarity=0.983 Sum_probs=411.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|++.||||+++|.+|.+||+++|+||||||++|++|++++++.++|+|++||||.|||+|++++|++|..|+++++++||
T Consensus 129 l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~ 208 (586)
T PLN02271 129 LPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFG 208 (586)
T ss_pred HhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccc-cccccccceeEEEecccCCCCCCCCHH
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPK-RRVSGTSIYFESMPYRLDESTGLVDYD 159 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~id~~ 159 (447)
+++++|++|||+.||+.||.+++.++++|||+|+.++++||||++|+++... ..++.+|..+++++|++|++++.+|+|
T Consensus 209 ~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd 288 (586)
T PLN02271 209 LDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYD 288 (586)
T ss_pred CcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHH
Confidence 9998998999999999999999999999999999999999999999875421 356778888999999998888999999
Q ss_pred HHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC
Q 013217 160 MLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 239 (447)
Q Consensus 160 ~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g 239 (447)
++++.+..++||+|+++.+.|++.+|+++|++||+++|+++++|++|++|+++.+.+++|++++|++++|+||||+||+|
T Consensus 289 ~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG 368 (586)
T PLN02271 289 KLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG 368 (586)
T ss_pred HHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc
Confidence 99997767799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeecCCc--------------chhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 013217 240 GMIFFKKDPV--------------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 305 (447)
Q Consensus 240 G~i~~~~~~~--------------~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~ 305 (447)
|+|+++++.. ..+++.++++.++||+++|+|+++.+||++++++++..++|++|.+++.+|++.|+
T Consensus 369 G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA 448 (586)
T PLN02271 369 GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALA 448 (586)
T ss_pred eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 9999976411 12468899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHH
Q 013217 306 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 306 ~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~ 385 (447)
+.|.+.|+++++++|++|++++|+++.++++..+++.|++.||.+|++.+|++.+++.+++||||++++|+|||.++||+
T Consensus 449 ~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~ 528 (586)
T PLN02271 449 SALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFE 528 (586)
T ss_pred HHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHH
Confidence 99999999999999999999999999899999999999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 013217 386 AIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 447 (447)
Q Consensus 386 ~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 447 (447)
+++++|.++++....+|.+. |+++++|++.+.++ +.++++|++|.+||++||+|+|
T Consensus 529 ~iA~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~i~~l~~~V~~~~~~fp~p~~ 584 (586)
T PLN02271 529 TIADFLLRAAQIASAVQREH-GKLQKEFLKGLQNN-----KDIVELRNRVEAFASQFAMPGF 584 (586)
T ss_pred HHHHHHHHHHhhhhhhhhhc-chhhhhhhhccCCH-----HHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999887777765 56778888777653 3789999999999999999974
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=4.2e-86 Score=633.31 Aligned_cols=391 Identities=57% Similarity=0.959 Sum_probs=330.9
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|++.||||+++|++|.+||+++|+|+||||++||.|++++++.++|+|++||||.|||+|++++|++|..++++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHH
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~ 160 (447)
+++++|.+||++.||+.||++++.+|++|||+|+.+++.+|||++|++....+++..+|.++++++|++|++++.||+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999999999999999999999999866555566688899999999999899999999
Q ss_pred HHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCc
Q 013217 161 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 240 (447)
Q Consensus 161 l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG 240 (447)
+++++++++||+|+++.|+|++.+|++++++||+++|++|++|++|.+|+++.+.+++|+++||++++||||+|+|||||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCC--------cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC
Q 013217 241 MIFFKKDP--------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 312 (447)
Q Consensus 241 ~i~~~~~~--------~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 312 (447)
+|+++++. ...+++.+++++.+||+.+|+|+++.++|++++++++.++.|++|.+++++|++.|++.|.+.|
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999210 0113899999999999999999999999999999999988899999999999999999999999
Q ss_pred cEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 313 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 313 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
+++++++|++|++++|++..++++.++++.|+++||.+|++.+|++.+++.+++|||||+++|+|||+++||++++++|
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 9999999999999999988889999999999999999999999999878889999999999999999999999999986
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=3.3e-76 Score=588.46 Aligned_cols=444 Identities=71% Similarity=1.164 Sum_probs=396.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|++.||||+++|.+|.+||+++|+||||||++|+.|++++.+.++++|++||||.|||+|+++++++|+.|+++++++|+
T Consensus 15 ~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~ 94 (475)
T PLN03226 15 LEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR 94 (475)
T ss_pred hhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHH
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~ 160 (447)
.+.+.|.+|++++||+.||.+++.++++|||+|++++..++||++|++......++..+..+++++|.++++++.+|+++
T Consensus 95 ~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~ 174 (475)
T PLN03226 95 LDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDK 174 (475)
T ss_pred CCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHH
Confidence 99888888999999999999999999999999999999999999998643322344556667777888888889999999
Q ss_pred HHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCc
Q 013217 161 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 240 (447)
Q Consensus 161 l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG 240 (447)
|++++.+++|++|+++.++|+...|+++|+++|+++|+++++|+||++|+++.+..++|++++|++++|+||||+||+||
T Consensus 175 Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~Gg 254 (475)
T PLN03226 175 LEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRGG 254 (475)
T ss_pred HHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCce
Confidence 99999877899988877889999999999999999999999999999999999888888889999999999999999999
Q ss_pred eEEeecCCc--------chhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC
Q 013217 241 MIFFKKDPV--------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 312 (447)
Q Consensus 241 ~i~~~~~~~--------~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 312 (447)
+|+++++.. .+.++.+.++...+++++|+|+++.++++++|++++...+++++.+++.+|+++|++.|.+.|
T Consensus 255 ~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G 334 (475)
T PLN03226 255 MIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKG 334 (475)
T ss_pred EEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999976311 011344467777888889999999999999999999888899999999999999999999999
Q ss_pred cEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 313 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 313 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
++++.+++++|++++++.+.++++.++.+.|++.||.++++.+|++..++.+++||+|++.+|+||++++||++++++|.
T Consensus 335 ~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~ 414 (475)
T PLN03226 335 YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLH 414 (475)
T ss_pred CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHH
Confidence 99998888899999999888889999999999999999999999887788889999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 013217 393 EGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 447 (447)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 447 (447)
++++.....+.++ ++++++|...+..+.. .+.++++|++|.+||++||+|++
T Consensus 415 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~fp~~~~ 466 (475)
T PLN03226 415 RAVTIALKIQKEH-GKKLKDFKKGLESNDF--SKDIEALRAEVEEFATSFPMPGF 466 (475)
T ss_pred HHHHHhhhhhhhc-ccchhhhhhhcccccc--HHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999887777665 5677777554433210 14689999999999999999864
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.9e-76 Score=578.14 Aligned_cols=421 Identities=42% Similarity=0.707 Sum_probs=375.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|++.||||+++|.+|.+||+++|+||||||++|+.|++++++.++|+|++||||.|||+|++++|++|..+.++++++||
T Consensus 30 l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~ 109 (493)
T PRK13580 30 ILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG 109 (493)
T ss_pred HHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCC-------------------------------CCEEEEecCCCCcccCCCcc
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKP-------------------------------HDRIMGLDLPHGGHLSHGFM 129 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~p-------------------------------gd~Vl~~~~~~~~~~~~~~~ 129 (447)
+++ +|||+.||+.||.+++.++++| ||+|+.+++.+|||++|++
T Consensus 110 a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~- 184 (493)
T PRK13580 110 AEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGF- 184 (493)
T ss_pred CCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCc-
Confidence 998 6999999999999999999987 8999999999999999996
Q ss_pred ccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 130 TPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
..++++..+++++|+++++++.+|++++++++.+++|++++++.|++++..|+++|+++|+++|+++++|+||++|
T Consensus 185 ----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~~G 260 (493)
T PRK13580 185 ----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAG 260 (493)
T ss_pred ----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchhhc
Confidence 4567888899999999987899999999999998677777778899988999999999999999999999999999
Q ss_pred ccccccCC---CCCCcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc
Q 013217 210 LVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 286 (447)
Q Consensus 210 ~~~~~~~~---~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~ 286 (447)
++..+..+ +|+.++||+++|+||||+||+||+|++++ ++.+.++.. .|+++|+|+++.+++.++++.++.
T Consensus 261 ligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~------~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e~~ 333 (493)
T PRK13580 261 LVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKG-CPLVLGGPLPHVMAAKAVALAEAR 333 (493)
T ss_pred eeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH------HHHHHHhhC-CCcccCCCccHHHHHHHHHHHHHh
Confidence 99876654 56668999999999999999999999998 788888766 488899999999999999999998
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC-CCCCCC
Q 013217 287 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPG 365 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~ 365 (447)
+++++++++++.+|+++|++.|.+.|++++.+++++|++++++.+.+.++..+.+.|+++||.++++..|.++ +++.++
T Consensus 334 ~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~s 413 (493)
T PRK13580 334 TPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTS 413 (493)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCc
Confidence 7778899999999999999999999999887778999999999876666678889999999999999899876 556788
Q ss_pred eEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 013217 366 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP 445 (447)
Q Consensus 366 ~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 445 (447)
+||||++++|+||++++||++++++|.++++.....+.. .|+++++ +...+ + ..++++|++|.+||++||++
T Consensus 414 rLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~~~~~~-~~~~~~~--~~~~~-~----~~~~~~~~~v~~~~~~~p~~ 485 (493)
T PRK13580 414 GIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTTPGTTA-EGAPSKA--KYELD-E----GVAQEVRARVAELLARFPLY 485 (493)
T ss_pred eEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhhhcccc-ccccccc--cccCC-H----HHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999998765322222 2444343 22222 2 36889999999999999983
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.6e-66 Score=521.74 Aligned_cols=438 Identities=63% Similarity=1.073 Sum_probs=376.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|++.|||++++|.+|.+||+++|+|+||||++||.|++++.+.++++|++|+|+++|+.|++..+.+|+.++++++++||
T Consensus 15 ~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~ 94 (452)
T PTZ00094 15 LKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG 94 (452)
T ss_pred HhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHH
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~ 160 (447)
+++++|.++++++||++||.+++.++++|||+|++...+|+++++++...........+..+++.++++++ ++.+|+++
T Consensus 95 a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~id~~~ 173 (452)
T PTZ00094 95 LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLIDYDK 173 (452)
T ss_pred CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCcCHHH
Confidence 99888878888899999999999999999999999999999999877533222233445556777777774 48999999
Q ss_pred HHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCc
Q 013217 161 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 240 (447)
Q Consensus 161 l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG 240 (447)
+++++++++|++|+++.++++...|+++|.++|+++|+++++|++|++|+++.+..+.++.++|++++|+||||+||+||
T Consensus 174 L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~Gg 253 (452)
T PTZ00094 174 LEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRSG 253 (452)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCce
Confidence 99999776899988877778889999999999999999999999999999988877777778999999999999999999
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
+++++++.. ..+...++...+|.+.|+++...++++++|++++...+++++.+++.+++++|.+.|.+.|+++..+++
T Consensus 254 ~l~~~~~~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~ 331 (452)
T PTZ00094 254 LIFYRKKVK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT 331 (452)
T ss_pred EEEEecccc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC
Confidence 999976311 023345555667778899999999999999999877788889999999999999999888999887555
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
++|..++++...++++..+...|+++||.++...+|++..+..+++||+|++.+|++|++++||++++++|.+++.....
T Consensus 332 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~ 411 (452)
T PTZ00094 332 DNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQE 411 (452)
T ss_pred CCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 56777888877788889999999999999988778877655667899999999999999999999999999999998776
Q ss_pred HHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 013217 401 AKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 447 (447)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 447 (447)
+++++ +++..+|.+...+. .+++++|++|.+||++||+|++
T Consensus 412 ~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~ 452 (452)
T PTZ00094 412 IQKQV-GKKLVDFKKALEKN-----PELQKLRQEVVEFASQFPFPGI 452 (452)
T ss_pred hhhhc-ccchhhhhhhcccH-----HHHHHHHHHHHHHHHhCCCCCC
Confidence 66655 44444444333222 4789999999999999999985
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=4.4e-57 Score=447.99 Aligned_cols=407 Identities=56% Similarity=0.875 Sum_probs=346.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|+++||||+++|.+|.++|+++|+|++|||+++|.|++++.+.+.++|+.|++|+|+++|++..+++|+.+++++++++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g 88 (416)
T PRK13034 9 LEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG 88 (416)
T ss_pred HhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999999999999998899999999999999999999999888899999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHH
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~ 160 (447)
.+. +++.+.||+.||.+++.++++|||+|++....|++++..+. .....+..++.+.+++++.++.+|+++
T Consensus 89 ~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~ 159 (416)
T PRK13034 89 CDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTGLIDYDE 159 (416)
T ss_pred CCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccCCcCHHH
Confidence 986 45666899999999999999999999999999988765442 112234444445677776678899999
Q ss_pred HHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCc
Q 013217 161 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 240 (447)
Q Consensus 161 l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG 240 (447)
+++.+...+||+|+++.+.++...|+++|.++|+++|+++++|++|+.|.+..+....++.++|++++|+||+|+||.||
T Consensus 160 le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~GG 239 (416)
T PRK13034 160 VEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRGG 239 (416)
T ss_pred HHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCCe
Confidence 99988666899999877778888899999999999999999999999999888776666667999999999999999999
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
+++++++ ++.++++...+++++++++.+.+++.+.++.++...+..++.+++.+|+++|++.|.+.|+++..+++
T Consensus 240 ~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~ 314 (416)
T PRK13034 240 MILTNDE-----EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGT 314 (416)
T ss_pred EEEECcH-----HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCC
Confidence 9988774 56667777677776777778788888878877665555678899999999999999999999875446
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC-CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 399 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~ 399 (447)
+++.+++++...+.+...+.+.|+++||.++....|++. .|..+++||+|++++|++|++++|+++++++|++++...
T Consensus 315 ~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~- 393 (416)
T PRK13034 315 DNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDL- 393 (416)
T ss_pred CCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcC-
Confidence 789888988777777788889999999999987778754 556678999999999999999999999999999997721
Q ss_pred HHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 013217 400 EAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP 445 (447)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 445 (447)
++ . +.+++||++|.+|+++||++
T Consensus 394 ------------------~~-~----~~~~~~~~~~~~~~~~~~~~ 416 (416)
T PRK13034 394 ------------------GN-A----ALEQRVRKEVKALCSRFPIY 416 (416)
T ss_pred ------------------CC-H----HHHHHHHHHHHHHHHhCCCC
Confidence 11 1 25789999999999999974
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=3.2e-52 Score=416.28 Aligned_cols=408 Identities=54% Similarity=0.851 Sum_probs=337.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC
Q 013217 1 MQACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g 80 (447)
|++.|||++++|+++.+++++.|+|++++|++|+.|++++...+.++|..|+++++++.|.+..+.+|+.+++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g 85 (416)
T PRK00011 6 LAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 85 (416)
T ss_pred hhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999999999888888888999999998988999999888899999999
Q ss_pred CCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHH
Q 013217 81 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 81 ~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~ 160 (447)
++++ +|.++||++|+..++.++++|||+|++++++|+++++++. ...+.+.+.+++.++++++++.+|+++
T Consensus 86 ~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~d~~~ 156 (416)
T PRK00011 86 AEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS-----PVNFSGKLYNVVSYGVDEETGLIDYDE 156 (416)
T ss_pred CCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc-----ccccccceeeEeecCcCcccCCcCHHH
Confidence 9864 4555889999999999999999999999999988765442 112233345666777765568899999
Q ss_pred HHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCc
Q 013217 161 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 240 (447)
Q Consensus 161 l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG 240 (447)
+++++++++|++|+++.++++...|+++|.++|+++|+++++|++|+.|.+..+..+.++.++|++++|+||+|+||+||
T Consensus 157 l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~gg 236 (416)
T PRK00011 157 VEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRGG 236 (416)
T ss_pred HHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCce
Confidence 99999766899999977778777899999999999999999999999888765544444557899999999999999999
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
+++++++ ++.+++.....++..+++....++++..++..+...+++++.+++.++++++++.|.+.|+++...++
T Consensus 237 ~i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 311 (416)
T PRK00011 237 LILTNDE-----ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGGT 311 (416)
T ss_pred EEEeCCH-----HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCC
Confidence 9999753 67787776666666677777778887777766665566888999999999999999999988765334
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC-CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 399 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~ 399 (447)
.++++++.+.+.+++..++.+.|.++||.++....|.+. .++.+.++|+++..+++++++++|++++++.|++++....
T Consensus 312 ~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~~~ 391 (416)
T PRK00011 312 DNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDNPD 391 (416)
T ss_pred CCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhccC
Confidence 568888887655556788999999999999866555542 3445668999998889999999999999999998876421
Q ss_pred HHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 013217 400 EAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 446 (447)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 446 (447)
+++ .+++++++|.+|+++||.+.
T Consensus 392 -------------------~~~-----~~~~~~~~~~~~~~~~~~~~ 414 (416)
T PRK00011 392 -------------------DEA-----VIEEVKEEVKELCKRFPLYK 414 (416)
T ss_pred -------------------cch-----hHHHHHHHHHHHHHhCCCCC
Confidence 112 57899999999999999754
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=9.4e-49 Score=389.93 Aligned_cols=384 Identities=62% Similarity=0.971 Sum_probs=318.7
Q ss_pred CCCCHHHHHHHHHHHHHhhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC
Q 013217 2 QACNPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 81 (447)
Q Consensus 2 ~~~~~~~~~~~~~e~~~~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~ 81 (447)
.++|+|++++|.+|..+|+++|+|++++|+++|.|++++...+..+|..|+|+.++|+|.+..+.+++.+++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~ 80 (402)
T cd00378 1 ADVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA 80 (402)
T ss_pred CCcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC
Confidence 36899999999999999999999999999999999999999888899999999999999999999998888899999999
Q ss_pred CCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHH
Q 013217 82 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 161 (447)
Q Consensus 82 ~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l 161 (447)
+.. +|.++||++|+..++.++++|||+|++.++.|+++++++... .+...|..+..++++.+++++.+|++++
T Consensus 81 ~~~----~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l 153 (402)
T cd00378 81 EYA----NVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDAL 153 (402)
T ss_pred Cce----eeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHH
Confidence 863 456688999999999999999999999999999887654321 1334454445555554433688999999
Q ss_pred HHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCce
Q 013217 162 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 241 (447)
Q Consensus 162 ~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG~ 241 (447)
++++...+|++|+++.+++|...|+++|.++|+++|+++++|++|+.|++..+..+.++.++|++++|+||+|+||+||+
T Consensus 154 ~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~ 233 (402)
T cd00378 154 EKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGL 233 (402)
T ss_pred HHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceE
Confidence 99997558999998888888878999999999999999999999988887655444444468999999999999999999
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
++++++ ++.+++.....++..+++....+++++.++......+++++.+++.++++++.+.|.+.|+.++.....
T Consensus 234 i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 308 (402)
T cd00378 234 ILTRKG-----ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTD 308 (402)
T ss_pred EEeccH-----HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCC
Confidence 998774 677777665566667777777788877788766544567888999999999999999999988653345
Q ss_pred CeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCC-CCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~-~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
++++|+++.+.+.+..++.+.|+++||.++....|+... +..+.++|+|++.++++|++++||+++++.|+++++.
T Consensus 309 ~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 309 NHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 788899987555667788888999999998765666542 3345689999999998999999999999999998864
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-36 Score=297.67 Aligned_cols=343 Identities=22% Similarity=0.242 Sum_probs=262.8
Q ss_pred cCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCC-CccceeeecCCcH-HHHHHHHH
Q 013217 27 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS-PANFEVYT 104 (447)
Q Consensus 27 ~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~-~~~~~~v~~~sGs-~a~~~~~~ 104 (447)
+.....|..|++++..++.+.++....+. +..........+.+|+.+++++|+++ +++ ..|+|+ .++..+..
T Consensus 29 aa~~~~p~~V~~a~~~~~~~~~an~~r~~--~~~~~~~t~~~e~aRe~va~~~~a~~~~eI----vft~~tT~aln~va~ 102 (405)
T COG0520 29 AATSQKPQAVLDAVAEYYRRYNANVHRGA--HTLAEEATDLYEAAREAVARFLNADSSDEI----VFTRGTTEALNLVAR 102 (405)
T ss_pred cccccCCHHHHHHHHHHHHhhcCCcCccc--chHHHHHHHHHHHHHHHHHHHhCCCCCCeE----EEeCChhHHHHHHHH
Confidence 44456799999999988876543333222 23334445555689999999999995 654 337776 88888888
Q ss_pred Hh---cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCCC
Q 013217 105 AI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAY 180 (447)
Q Consensus 105 al---~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~-~~~~ 180 (447)
++ +++||+|++++.+|.+++.+|.... +..|. +++.++++ +++.+|.|++++++++ +||+|.++ .||.
T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~----~~~Ga--~v~~i~~~-~~g~~~~~~~~~~i~~-~Tklvais~vSn~ 174 (405)
T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIVPWQELA----KRTGA--KVRVIPLD-DDGLLDLDALEKLITP-KTKLVALSHVSNV 174 (405)
T ss_pred HhhhhhcCCCEEEEccCcchhhHHHHHHHH----HhcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CceEEEEECcccc
Confidence 88 6999999999999999987764321 23354 44455566 6789999999999988 99999998 4455
Q ss_pred CC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHh
Q 013217 181 PR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 258 (447)
Q Consensus 181 ~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i 258 (447)
++ ..|+++|+++||++|+++++|++|++|.++.++... ++|++++|+||||.||.| |++++++ ++.+.+
T Consensus 175 tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~Df~afsgHKwl~gP~GiGvLy~r~------~~l~~l 245 (405)
T COG0520 175 TGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDFLAFSGHKWLLGPTGIGVLYVRK------ELLEEL 245 (405)
T ss_pred ccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCCEEEEcccccccCCCceEEEEEch------HHHhhc
Confidence 55 889999999999999999999999999887766444 499999999999999999 9999998 455544
Q ss_pred hhccC---------------------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEee
Q 013217 259 NNAVF---------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLV 316 (447)
Q Consensus 259 ~~~~~---------------------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~ 316 (447)
.+... ....|||+.....++.+|++.++..++++..++..+.+.++.+.|++ ++++++
T Consensus 246 ~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~ 325 (405)
T COG0520 246 EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIY 325 (405)
T ss_pred CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 22111 11258999999999999999999888888889999999999999998 678888
Q ss_pred eCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCC---CCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 317 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS---VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 317 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~---~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.++......++.+.-.++...++...|.+.||.++.+. .|........+.+|+|++.||| ++|+++++++|++
T Consensus 326 g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt----~edid~l~~aL~~ 401 (405)
T COG0520 326 GPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT----EEDVDRLLEALKK 401 (405)
T ss_pred cCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC----HHHHHHHHHHHHH
Confidence 75432334455555557788999999999999998753 2221111123459999999999 9999999999988
Q ss_pred HHH
Q 013217 394 GVE 396 (447)
Q Consensus 394 ~l~ 396 (447)
+..
T Consensus 402 ~~~ 404 (405)
T COG0520 402 ALA 404 (405)
T ss_pred Hhh
Confidence 753
No 12
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-33 Score=263.59 Aligned_cols=340 Identities=20% Similarity=0.231 Sum_probs=258.4
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc-HHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYT 104 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~ 104 (447)
.+..+++.|.|+++|..+++..| |+|.+-|..|.+..+.+| .+|+.+++++|+++.++.+ ||| |++|..++.
T Consensus 7 ~~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve-~AR~~iA~llga~~~eIiF----TSG~TEsnNlaI~ 79 (386)
T COG1104 7 NAATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVE-EAREQIAKLLGADPEEIIF----TSGATESNNLAIK 79 (386)
T ss_pred ccccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHH-HHHHHHHHHhCCCCCeEEE----ecCCcHHHHHHHH
Confidence 35667889999999999998864 889886666777777777 6899999999999975533 666 588887777
Q ss_pred Hh--c----CCCCEEEEecCCCCcccCCCccccccccccc-cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 105 AI--L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT-SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 105 al--~----~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
+. . +.|.+|+++..+|.+.+... ++. ..++++..++++ .+|.+|+++|++++++ +|.+|.+.+
T Consensus 80 g~~~a~~~~~~~~HIIts~iEH~aVl~~~--------~~Le~~g~~Vtyl~V~-~~G~v~~e~L~~al~~-~T~LVSim~ 149 (386)
T COG1104 80 GAALAYRNAQKGKHIITSAIEHPAVLNTC--------RYLERQGFEVTYLPVD-SNGLVDLEQLEEALRP-DTILVSIMH 149 (386)
T ss_pred hhHHhhhcccCCCeEEEcccccHHHHHHH--------HHHHhcCCeEEEeCCC-CCCeEcHHHHHHhcCC-CceEEEEEe
Confidence 62 2 25789999999998876533 222 223566666677 4799999999999987 888888875
Q ss_pred CCCC--CCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhH
Q 013217 178 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 254 (447)
Q Consensus 178 ~~~~--~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~ 254 (447)
.||- ..+|+++|.++|+++|+++++|++|+.|-++.++.... +|++++|.|| |.||+| |++++++..
T Consensus 150 aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~---vD~ls~SaHK-~~GpkGiGaLyv~~~~------ 219 (386)
T COG1104 150 ANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELG---VDLLSFSAHK-FGGPKGIGALYVRPGV------ 219 (386)
T ss_pred cccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccC---cceEEeehhh-ccCCCceEEEEECCCC------
Confidence 5543 38999999999999999999999999998876654433 8999999999 789999 999997641
Q ss_pred HHHhhhccCCC------CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEeeeCCCCCeeEE
Q 013217 255 ESAINNAVFPG------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLVL 326 (447)
Q Consensus 255 ~~~i~~~~~~~------~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~ 326 (447)
++.+....| ..||.+.+.+++++.|++.+. ..++....++.+.+++|.+.|.+ +++.+.+.....-...
T Consensus 220 --~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~ 296 (386)
T COG1104 220 --RLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNI 296 (386)
T ss_pred --ccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCe
Confidence 122222222 268999999999999999876 45777888899999999999987 4554443321111113
Q ss_pred ecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC--------------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMASITLNKNSVPGDK--------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--------------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
+.+...++.++.+...|+.+||.++.++-.... .....+.||+|+...|| ++|++++++.+.
T Consensus 297 ~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt----~eei~~~~~~l~ 372 (386)
T COG1104 297 LNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTT----EEEIDAAAEALK 372 (386)
T ss_pred EEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCC----HHHHHHHHHHHH
Confidence 334445778999999999999999875321111 11234679999999998 999999999999
Q ss_pred HHHHHHH
Q 013217 393 EGVEITL 399 (447)
Q Consensus 393 ~~l~~~~ 399 (447)
++++..+
T Consensus 373 ~~i~~lr 379 (386)
T COG1104 373 EIIKRLR 379 (386)
T ss_pred HHHHHHh
Confidence 9998653
No 13
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=5.6e-31 Score=261.98 Aligned_cols=344 Identities=21% Similarity=0.249 Sum_probs=246.8
Q ss_pred CeeE-ecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCC-CCCccceeeecCCc-HH
Q 013217 22 SLEL-IASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSG-SP 97 (447)
Q Consensus 22 ~i~l-~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~-~~~~~~~~v~~~sG-s~ 97 (447)
.+-| .++..+.|+.|++++..++...+ +++.. .+..+..+.+.++ .+++.+++++|+ ++++ |..++| ++
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~~----i~~~~~~t~ 92 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYE-AAREQVAQLLNAPDAKN----IVWTRGTTE 92 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCCCCCCE----EEEECCHHH
Confidence 3444 46667889999999998886643 44432 2223334444454 677899999999 5553 333555 58
Q ss_pred HHHHHHHHh----cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 013217 98 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 98 a~~~~~~al----~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~kli 173 (447)
++..++.++ ++|||+|++.+++|++.+..+. ......|. +++.++++ .++.+|++++++.+++ +|++|
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv 164 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWL----MVAQQTGA--KVVKLPLG-ADRLPDVDLLPELITP-RTRIL 164 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHH----HHHHHhCC--EEEEEecC-CCCcCCHHHHHHhcCc-CcEEE
Confidence 888888887 4899999999999877532221 11233454 44444455 4578999999999977 89999
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcc
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 250 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~ 250 (447)
++++++|++ ..|+++|.++|+++|+++++|++|+.|..+.++... ++|++++|+|| +.||.| |++++++
T Consensus 165 ~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~---- 236 (401)
T PRK10874 165 ALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL---DIDFYAFSGHK-LYGPTGIGVLYGKS---- 236 (401)
T ss_pred EEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc---CCCEEEEeccc-ccCCCccEEEEEch----
Confidence 998766664 789999999999999999999999877664433222 48999999999 568888 9999887
Q ss_pred hhhHHHHhhhcc------------------C--CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 251 GVELESAINNAV------------------F--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 251 ~~~~~~~i~~~~------------------~--~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
++.+.+.... . ....|+|+...++++..|++.+...++....+++.+.++++.+.|++
T Consensus 237 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~ 314 (401)
T PRK10874 237 --ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAK 314 (401)
T ss_pred --HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 5555443211 0 11257889889999999998877667777778888889999999988
Q ss_pred C-CcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC--CC-CCCCeEEEecCccccCCCCHHHHHH
Q 013217 311 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SA-LVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 311 ~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~~-~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
. |++++... .+.++.+.+. +++.+++.+.|.++||.++.+..+... .. -..++||+|++.++| ++|+++
T Consensus 315 ~~g~~~~~~~-~~~i~~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt----~edid~ 387 (401)
T PRK10874 315 LPGFRSFRCQ-DSSLLAFDFA--GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT----QSDVDA 387 (401)
T ss_pred CCCEEEeCCC-CCcEEEEEEC--CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC----HHHHHH
Confidence 4 88776532 3445555543 456788889999999999764322110 00 013689999999998 999999
Q ss_pred HHHHHHHHHHH
Q 013217 387 IADFIHEGVEI 397 (447)
Q Consensus 387 l~~~i~~~l~~ 397 (447)
++++|++++..
T Consensus 388 ll~al~~~~~~ 398 (401)
T PRK10874 388 LVNAVDRALEL 398 (401)
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 14
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=1.9e-30 Score=254.31 Aligned_cols=331 Identities=17% Similarity=0.110 Sum_probs=238.3
Q ss_pred eeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHH
Q 013217 23 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 102 (447)
Q Consensus 23 i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~ 102 (447)
++++|++..+|++|++++.+.+.+ + ++. . ...+.+.+++++++++|+++++. .+.+.||++++..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~-----~---~~~---~-~~~~~~~~~~~la~~~g~~~~~~--~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLG-----H---RSP---E-FLALMDEILEGLRYVFQTENGLT--FLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccC-----C---CCH---H-HHHHHHHHHHHHHHHhcCCCCCE--EEEecCcHHHHHHH
Confidence 468999999999999999654321 1 111 1 12333355689999999964332 23456778999999
Q ss_pred HHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC
Q 013217 103 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 182 (447)
Q Consensus 103 ~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~ 182 (447)
+.++++|||+|++..+.|.+.. +. ..+...|. +++.++.++ ++.+|++++++.+++++|++|+++.++|+.
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~ 137 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGDR---WA---DMAERYGA--DVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETST 137 (356)
T ss_pred HHHhCCCCCEEEEecCCchhHH---HH---HHHHHhCC--CeEEeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCc
Confidence 9999999999999876655421 10 12233454 444444553 468999999999976689999888665543
Q ss_pred --CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhh
Q 013217 183 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 259 (447)
Q Consensus 183 --~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~ 259 (447)
..|+++|.++|+++|+++++|++|+.|..+.+.... ++|++++|+||||++|.| |+++.++ ++.+.+.
T Consensus 138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~l~~p~g~G~l~~~~------~~~~~~~ 208 (356)
T cd06451 138 GVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEW---GVDVAYTGSQKALGAPPGLGPIAFSE------RALERIK 208 (356)
T ss_pred ccccCHHHHHHHHHhcCCEEEEeeehhccCcccccccc---CccEEEecCchhccCCCCcceeEECH------HHHHHHH
Confidence 789999999999999999999999877543322111 479999999999999988 9999987 5555544
Q ss_pred h--ccC----------------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC-
Q 013217 260 N--AVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS- 320 (447)
Q Consensus 260 ~--~~~----------------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~- 320 (447)
. ... ....++++...++++.++++.+...++++..++..++++++.+.|.+.|+++..+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 288 (356)
T cd06451 209 KKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPEL 288 (356)
T ss_pred hcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc
Confidence 2 000 023467778878888888888776677888899999999999999988988865311
Q ss_pred -CCeeEEecCCCCCCCHHHHHHHHhhc-CeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 321 -DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 321 -~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
...+.++.+. .+.+..++.+.|.+. ||.++.+.. +..+.+||++++.+++ ++|+++++++|++++
T Consensus 289 ~~~~~~~~~~~-~~~~~~~~~~~L~~~~gI~~~~g~~-----~~~~~~iRis~~~~~~----~e~v~~~~~~l~~~~ 355 (356)
T cd06451 289 RSPTVTAVLVP-EGVDGDEVVRRLMKRYNIEIAGGLG-----PTAGKVFRIGHMGEAT----REDVLGVLSALEEAL 355 (356)
T ss_pred CCCceEEEECC-CCCCHHHHHHHHHHhCCEEEecccc-----cccCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 1223344443 345778899998887 999965321 1234589999998888 999999999998865
No 15
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=8.8e-31 Score=260.81 Aligned_cols=340 Identities=17% Similarity=0.141 Sum_probs=242.0
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCC-CCCccceeeecCCcH-HHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PANFEV 102 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~-~~~~~~~~v~~~sGs-~a~~~~ 102 (447)
.++.++.|+.|++++..++...+ +++.. .+..+.+..+.++ .+++.+++++|+ ++++ |..++|+ +++..+
T Consensus 29 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~~~----v~~t~g~t~~l~~~ 101 (406)
T PRK09295 29 SAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKME-NVRKQAALFINARSAEE----LVFVRGTTEGINLV 101 (406)
T ss_pred CcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCcCCCCe----EEEeCCHHHHHHHH
Confidence 46677889999999998886543 23321 2223444455555 577899999998 4543 3336665 888877
Q ss_pred HHH----hcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 103 YTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 103 ~~a----l~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
+.+ +++|||+|++.+++|++.+..+.. .....|. +++.++++ .++.+|++++++++++ +|++|+++++
T Consensus 102 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~l~~~ 173 (406)
T PRK09295 102 ANSWGNSNVRAGDNIIISEMEHHANIVPWQM----LCARVGA--ELRVIPLN-PDGTLQLETLPALFDE-RTRLLAITHV 173 (406)
T ss_pred HHHhhhhcCCCcCEEEECcchhhHHHHHHHH----HHHHcCc--EEEEEecC-CCCCCCHHHHHHhcCC-CcEEEEEecc
Confidence 776 468999999999988765432211 1123344 44455555 4577999999999977 8999999876
Q ss_pred CCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHH
Q 013217 179 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 255 (447)
Q Consensus 179 ~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~ 255 (447)
+|++ ..|+++|.++|+++|+++++|++|+.|..+.++... ++|++++|+|| +.||.| |++++++ ++.
T Consensus 174 ~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~G~l~~~~------~~~ 243 (406)
T PRK09295 174 SNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHK-LYGPTGIGILYVKE------ALL 243 (406)
T ss_pred hhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhc---CCCEEEeehhh-ccCCCCcEEEEEch------HhH
Confidence 6654 789999999999999999999999888654433222 48999999999 668988 9999987 443
Q ss_pred HHhhhcc---------------------CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-Cc
Q 013217 256 SAINNAV---------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GY 313 (447)
Q Consensus 256 ~~i~~~~---------------------~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 313 (447)
+.+.... .....||++...++++..|++.+.+.+.+...++..+.++++.+.|.+. |+
T Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~ 323 (406)
T PRK09295 244 QEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDL 323 (406)
T ss_pred hhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 3332100 0113578999999999999998877678888888888999999999874 78
Q ss_pred EeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC---CCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 314 KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 314 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
+++.+.....++.+.+ .+.+++++.+.|+++||.++.+...... ....++.+|+|++.+|| ++|+++++++
T Consensus 324 ~~~~~~~~~~iv~~~~--~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt----~~did~l~~~ 397 (406)
T PRK09295 324 TLYGPQNRLGVIAFNL--GKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT----HEEVDRLVAG 397 (406)
T ss_pred EEeCCCCCceEEEEEE--CCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCC----HHHHHHHHHH
Confidence 8776422233333333 3456788888999999999764311110 00123579999999999 9999999999
Q ss_pred HHHHHH
Q 013217 391 IHEGVE 396 (447)
Q Consensus 391 i~~~l~ 396 (447)
|+++..
T Consensus 398 l~~i~~ 403 (406)
T PRK09295 398 LQRIHR 403 (406)
T ss_pred HHHHHH
Confidence 988643
No 16
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.8e-30 Score=258.16 Aligned_cols=343 Identities=20% Similarity=0.217 Sum_probs=243.9
Q ss_pred eeE-ecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCc-HHH
Q 013217 23 LEL-IASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSG-SPA 98 (447)
Q Consensus 23 i~l-~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sG-s~a 98 (447)
+-| .++..++|+.|++++..++...+ ++++. .+..+....+.++ .+++.+++++|++ +++ |..++| +++
T Consensus 18 iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~~----i~~t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYE-LARQQVARFLNAPDAEN----IVWTRGTTES 90 (398)
T ss_pred EEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCCe----EEEeCChHHH
Confidence 444 46666889999999988876432 44432 2223333334444 6788999999995 543 333555 489
Q ss_pred HHHHHHHh----cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 013217 99 NFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 174 (447)
Q Consensus 99 ~~~~~~al----~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii 174 (447)
+..++.++ ++|||+|++.+++|++.+..+. ..+...|. +++.++++ .++.+|++++++++++ +|++|+
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~~~~~l~~~i~~-~t~lv~ 162 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWL----MVAQQTGA--KVVKLPIG-ADLLPDIRQLPELLTP-RTRILA 162 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHHhcc-CceEEE
Confidence 88888887 5899999999999877432111 11233454 55555565 3467999999999987 899999
Q ss_pred EcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcch
Q 013217 175 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 251 (447)
Q Consensus 175 ~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~ 251 (447)
++.++|++ ..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+|| +.||.| |++++++
T Consensus 163 i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~----- 233 (398)
T TIGR03392 163 LGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQAL---DIDFYAFSGHK-LYGPTGIGVLYGKT----- 233 (398)
T ss_pred EECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhc---CCCEEEEeccc-ccCCCceEEEEEcH-----
Confidence 88766664 789999999999999999999999877654332221 48999999999 557888 9999887
Q ss_pred hhHHHHhhhccC--------------------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-
Q 013217 252 VELESAINNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE- 310 (447)
Q Consensus 252 ~~~~~~i~~~~~--------------------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~- 310 (447)
++.+.+..... ....|||+...++++..|++.+.+.++++..++..+.++++.+.|.+
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l 312 (398)
T TIGR03392 234 -ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQL 312 (398)
T ss_pred -HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 55554432110 11257899999999999999877667777778888889999999987
Q ss_pred CCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC--CC-CCCCeEEEecCccccCCCCHHHHHHH
Q 013217 311 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SA-LVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 311 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~~-~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
.|+++.... .+.++.+.+. +++++++.+.|.++||.++.+...... .. ..+++||+|++.++| ++|++++
T Consensus 313 ~g~~~~~~~-~~~i~~~~~~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t----~~ei~~l 385 (398)
T TIGR03392 313 PGFRSFRCP-GSSLLAFDFA--GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT----QQDVDAL 385 (398)
T ss_pred CCeEEeCCC-CCcEEEEEeC--CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC----HHHHHHH
Confidence 488776432 3444444443 456788999999999999764321100 00 013589999999998 9999999
Q ss_pred HHHHHHHHHH
Q 013217 388 ADFIHEGVEI 397 (447)
Q Consensus 388 ~~~i~~~l~~ 397 (447)
+++|+++++.
T Consensus 386 ~~~l~~~~~~ 395 (398)
T TIGR03392 386 VDAVGAALEL 395 (398)
T ss_pred HHHHHHHHHH
Confidence 9999987763
No 17
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.98 E-value=1.1e-29 Score=251.75 Aligned_cols=335 Identities=16% Similarity=0.141 Sum_probs=245.5
Q ss_pred CeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHH
Q 013217 22 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 101 (447)
Q Consensus 22 ~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~ 101 (447)
.+.+.|++..++++|++++...+.++ .+..+. ++-+.+++++++++|++.++. .+.+++|++++.+
T Consensus 10 ~~l~~pGP~~~~~~V~~a~~~~~~~~-----------~~~~~~-~~~~~~~~~l~~~~g~~~~~~--vi~~~~gt~a~~~ 75 (401)
T PLN02409 10 NHLFVPGPVNIPERVLRAMNRPNEDH-----------RSPAFP-ALTKELLEDVKYIFKTKSGTP--FIFPTTGTGAWES 75 (401)
T ss_pred ceeccCCCCCCCHHHHHHhcCCCCCC-----------CCHHHH-HHHHHHHHHHHHHhCCCCCCE--EEEeCCcHHHHHH
Confidence 45678999999999999997644321 122333 344467789999999986443 3556778899999
Q ss_pred HHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---hCCcEEEEcCC
Q 013217 102 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGAS 178 (447)
Q Consensus 102 ~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~~~klii~~~~ 178 (447)
++.++++|||+|++.++.|.+.. +. ..+...|. +++.++.+. ++.+|++++++++++ .++++|+++++
T Consensus 76 a~~~~~~~Gd~Vlv~~~~~~~~~---~~---~~~~~~g~--~v~~v~~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~ 146 (401)
T PLN02409 76 ALTNTLSPGDKVVSFRIGQFSLL---WI---DQMQRLNF--DVDVVESPW-GQGADLDILKSKLRQDTNHKIKAVCVVHN 146 (401)
T ss_pred HHHhcCCCCCEEEEeCCCchhHH---HH---HHHHHcCC--ceEEEECCC-CCCCCHHHHHHHHhhCcCCCccEEEEEee
Confidence 99999999999999987665431 10 12233454 444444543 345899999999986 37899998865
Q ss_pred CCCC--CCChHHHHHH--HHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhh
Q 013217 179 AYPR--DFDYPRMRQI--ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 253 (447)
Q Consensus 179 ~~~~--~~~~~~i~~i--a~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~ 253 (447)
.+++ ..|+++|.++ |+++|+++++|++|+.|..+.+.... ++|++++|+||||+||.| |++++++ +
T Consensus 147 ~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~---~~D~~~~s~~K~l~~P~G~G~l~~~~------~ 217 (401)
T PLN02409 147 ETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW---GVDVALTGSQKALSLPTGLGIVCASP------K 217 (401)
T ss_pred cccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc---CccEEEEcCccccCcCCCcceeEECH------H
Confidence 5443 7899999999 99999999999999887664443322 489999999999999888 9999987 5
Q ss_pred HHHHhhhccC---------------CC-C-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEee
Q 013217 254 LESAINNAVF---------------PG-L-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 316 (447)
Q Consensus 254 ~~~~i~~~~~---------------~~-~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 316 (447)
..+++..... .+ . .+||+...+.++..|++.+.+.++++..++..+.++++.+.|.+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~ 297 (401)
T PLN02409 218 ALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLC 297 (401)
T ss_pred HHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence 5555432110 01 1 35788888999999999988778888899999999999999998999887
Q ss_pred eCCCC--C-eeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 317 SGGSD--N-HLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 317 ~~~~~--~-~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
.+... + .+.++.+ +.+++..++.+.| +++||.+..+. .+.....||||++.+++ ++|+.++..+|.
T Consensus 298 ~~~~~~~s~~v~~~~~-p~~~~~~~l~~~l~~~~~i~i~~G~-----~~~~~~~~Rig~~g~~~----~~~~~~~~~~~~ 367 (401)
T PLN02409 298 TKKPEWRSDTVTAVVV-PEGIDSAEIVKNAWKKYNLSLGLGL-----NKVAGKVFRIGHLGNVN----ELQLLGALAGVE 367 (401)
T ss_pred cCChhhcccceEEEeC-CCCCCHHHHHHHHHHhCCEEEEcCC-----CcccCCEEEEcCCCCCC----HHHHHHHHHHHH
Confidence 64211 2 2223433 3467777787655 67899986542 12235689999999888 999999999999
Q ss_pred HHHHHH
Q 013217 393 EGVEIT 398 (447)
Q Consensus 393 ~~l~~~ 398 (447)
+++...
T Consensus 368 ~~l~~~ 373 (401)
T PLN02409 368 MVLKDV 373 (401)
T ss_pred HHHHHc
Confidence 998754
No 18
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.98 E-value=4.8e-30 Score=256.90 Aligned_cols=341 Identities=17% Similarity=0.144 Sum_probs=240.8
Q ss_pred cCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCc-HHHHHHHH
Q 013217 27 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSG-SPANFEVY 103 (447)
Q Consensus 27 ~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sG-s~a~~~~~ 103 (447)
++..+.|+.|++++..++...+ +++.. .++.+.+..+.++ .+++.+++++|++ +++ |..++| ++++..++
T Consensus 39 a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~~~----v~~t~g~t~al~~i~ 111 (424)
T PLN02855 39 AATSQKPAAVLDALQDYYEEYN--SNVHRGIHALSAKATDAYE-LARKKVAAFINASTSRE----IVFTRNATEAINLVA 111 (424)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCccchHHHHHHHHHH-HHHHHHHHHcCCCCCCE----EEEeCCHHHHHHHHH
Confidence 5566789999999988776533 23322 2233334444444 5678999999996 343 333555 58888777
Q ss_pred HH----hcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 013217 104 TA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 179 (447)
Q Consensus 104 ~a----l~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~ 179 (447)
.+ .++|||+|++.+++|++.+..+. ......|. +++.+++++ ++.+|++++++.+++ +|++|+++.++
T Consensus 112 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~a~~~g~--~v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i~~~~ 183 (424)
T PLN02855 112 YTWGLANLKPGDEVILSVAEHHSNIVPWQ----LVAQKTGA--VLKFVGLTP-DEVLDVEQLKELLSE-KTKLVATHHVS 183 (424)
T ss_pred HHhhhhcCCCcCEEEECCCccHHHHHHHH----HHHHHcCC--EEEEEecCC-CCCcCHHHHHHHhcc-CceEEEEeCcc
Confidence 65 36899999999999877542221 01123344 444555553 356999999999987 89999998766
Q ss_pred CCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHH
Q 013217 180 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 256 (447)
Q Consensus 180 ~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~ 256 (447)
|++ ..|+++|.++|+++|+++++|++|+.|....++... ++|++++|+|| +.||.| |++++++ ++.+
T Consensus 184 n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~------~~~~ 253 (424)
T PLN02855 184 NVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL---GADFLVASSHK-MCGPTGIGFLWGKS------DLLE 253 (424)
T ss_pred ccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc---CCCEEEeeccc-ccCCCccEEEEEch------hhhh
Confidence 654 789999999999999999999999887654432222 47999999999 678988 9999987 4444
Q ss_pred Hhhhcc--------------------CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEe
Q 013217 257 AINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 315 (447)
Q Consensus 257 ~i~~~~--------------------~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 315 (447)
++.... .....||++...++++..+++.+.+.++++..+++.+.++.+.+.|++. |+++
T Consensus 254 ~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i 333 (424)
T PLN02855 254 SMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRI 333 (424)
T ss_pred cCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 433210 0112578999999999999998877788888888999999999999874 8888
Q ss_pred eeCCC-----CCeeEEecCCCCCCCHHHHHHHHhhc-CeEEccCCCCC---CCCCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 316 VSGGS-----DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPG---DKSALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 316 ~~~~~-----~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~---~~~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
+.+.. ...++.+.+ .+.+..++.+.|.+. ||.++.++... .........+|+|++.+|| ++|+++
T Consensus 334 ~~~~~~~~~~r~~~v~~~~--~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt----~~di~~ 407 (424)
T PLN02855 334 YGPKPSEGVGRAALCAFNV--EGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT----KEEVDA 407 (424)
T ss_pred eCCCcccccCcccEEEEEE--CCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC----HHHHHH
Confidence 86421 122333333 345678899999776 99997642110 0000013579999999999 999999
Q ss_pred HHHHHHHHHHHH
Q 013217 387 IADFIHEGVEIT 398 (447)
Q Consensus 387 l~~~i~~~l~~~ 398 (447)
+++.|++++...
T Consensus 408 l~~~l~~~~~~~ 419 (424)
T PLN02855 408 FIHALKDTIAFF 419 (424)
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 19
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=1.8e-29 Score=251.39 Aligned_cols=341 Identities=19% Similarity=0.187 Sum_probs=239.9
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCc-ccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcH-HHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-PANFEV 102 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~-~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs-~a~~~~ 102 (447)
.++..++|+.|.+++...+...+ ++|... ++.+......++ .+++.+++++|++ +++ |..++|+ +++..+
T Consensus 24 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~~----v~~~~g~t~~l~~~ 96 (403)
T TIGR01979 24 SAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYE-AVREKVAKFINAASDEE----IVFTRGTTESINLV 96 (403)
T ss_pred CccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCCe----EEEeCCHHHHHHHH
Confidence 46666889999999988776643 333321 222223333444 5678899999998 443 3335555 787777
Q ss_pred HHHh----cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 103 YTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 103 ~~al----~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
+.++ +++||+|++.+++|++.+..+. ......|. +++.++++ +++.+|++++++.+.+ +|++|+++.+
T Consensus 97 ~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~i~~-~~~lv~~~~~ 168 (403)
T TIGR01979 97 AYSWGDSNLKAGDEIVISEMEHHANIVPWQ----LLAERTGA--TLKFIPLD-DDGTLDLDDLEKLLTE-KTKLVAITHV 168 (403)
T ss_pred HHHhhhhcCCCCCEEEECcchhhHHHHHHH----HHHHhcCc--EEEEEecC-CCCCCCHHHHHHHhcc-CCeEEEEEcc
Confidence 7764 6899999999998887543221 11223454 44444455 5678999999999987 8999998866
Q ss_pred CCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHH
Q 013217 179 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 255 (447)
Q Consensus 179 ~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~ 255 (447)
++++ ..|+++|.++|+++|+++++|++|+.|....++... ++|++++|+||++ ||.| |++++++ ++.
T Consensus 169 ~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~~-gp~G~g~l~~~~------~~~ 238 (403)
T TIGR01979 169 SNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQAL---DCDFYVFSGHKMY-GPTGIGVLYGKE------ELL 238 (403)
T ss_pred cccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCcccc---CCCEEEEeccccc-CCCCceEEEEch------HHH
Confidence 6553 789999999999999999999999888654433222 4899999999965 7888 9999887 444
Q ss_pred HHhhhccC--------------------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcE
Q 013217 256 SAINNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 256 ~~i~~~~~--------------------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
+.+..... ....|+++...++++..+++.+...+++...+++.+.++.+.+.|++. |++
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~ 318 (403)
T TIGR01979 239 EQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLR 318 (403)
T ss_pred hcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 44431100 012478888888899999988776677888899999999999999874 888
Q ss_pred eeeCCC---CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC---CCCCCCeEEEecCccccCCCCHHHHHHHH
Q 013217 315 LVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA 388 (447)
Q Consensus 315 ~~~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~~~~g~~~~di~~l~ 388 (447)
++.+.. ..+++.+.+. +.+..++.+.|.++||.++.+...... ..-.++.+|++++.+++ ++|+++++
T Consensus 319 ~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t----~~di~~l~ 392 (403)
T TIGR01979 319 IYGPRDAEDRGGIISFNVE--GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT----EEDIDALV 392 (403)
T ss_pred EeCCCCccccCceEEEEeC--CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC----HHHHHHHH
Confidence 876421 1344444443 346778889999999999753211000 00014589999999988 99999999
Q ss_pred HHHHHHHHH
Q 013217 389 DFIHEGVEI 397 (447)
Q Consensus 389 ~~i~~~l~~ 397 (447)
++|+++++.
T Consensus 393 ~~l~~~~~~ 401 (403)
T TIGR01979 393 EALKKVRKF 401 (403)
T ss_pred HHHHHHHHH
Confidence 999887653
No 20
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=6e-30 Score=251.95 Aligned_cols=333 Identities=21% Similarity=0.225 Sum_probs=235.8
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCC-CccceeeecCCcHHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYT 104 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~-~~~~~~v~~~sGs~a~~~~~~ 104 (447)
.++..++|+.|++++..++.+.+..+..+. +..+.++.+.++ .+++.+++++|+++ .++ +.+.++|.++..++.
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~r~~la~~lg~~~~~~v---~~~~~~t~a~~~~~~ 79 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFYANPHSGV-SHRSREFAEILE-EAREALAKLLGAPPDEEV---VFTSNGTEALNAVAS 79 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSGSSTSTSS-STTSHHHHHHHH-HHHHHHHHHHTSSTTEEE---EEESSHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhhhcCcccc-cchhhhhhHHHH-HHHHHHHHhcCCcccccc---ccccccchhhhhhhh
Confidence 467788999999999998877654332232 223444455554 67899999999998 532 334566689999999
Q ss_pred Hh---cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC-C
Q 013217 105 AI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-Y 180 (447)
Q Consensus 105 al---~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~-~ 180 (447)
++ +++||+|++.+.+|++....+. ...+..|..+. .++.+ .++.+|++++++.+++ +|++|+++... .
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~~v~--~i~~~-~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 80 SLLNPLKPGDEVLVTSNEHPSNRYPWE----EIAKRKGAEVR--VIPAD-PGGSLDLEDLEEALNP-DTRLVSISHVENS 151 (371)
T ss_dssp HHHHHGTTTCEEEEEESSHHHHHHHHH----HHHHHTTEEEE--EEEEG-TTSSCSHHHHHHHHHT-TESEEEEESBETT
T ss_pred ccccccccccccccccccccccccccc----cccccchhhhc--ccccc-ccchhhhhhhhhhhcc-ccceEEeeccccc
Confidence 98 7999999999988877642221 01123354344 44454 4578999999999986 99999998433 3
Q ss_pred C-CCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHh
Q 013217 181 P-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 258 (447)
Q Consensus 181 ~-~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i 258 (447)
+ ...|+++|.++|+++|+++++|++|+.|.+..++... ++|++++|+|| |+||+| |++++++ +..+++
T Consensus 152 tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~---~~D~~~~s~~K-l~gp~G~g~l~v~~------~~~~~~ 221 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL---GADFLVFSSHK-LGGPPGLGFLYVRP------EAIERL 221 (371)
T ss_dssp TTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT---TESEEEEESTS-TTSSSTEEEEEEEH------HHHHHH
T ss_pred ccEEeeeceehhhhhccCCceeEechhcccccccccccc---ccceeeecccc-cCCCCchhhheehh------hhhhcc
Confidence 3 3889999999999999999999999999876654433 48999999999 999999 9999998 455555
Q ss_pred hhccCC--------------------CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeee
Q 013217 259 NNAVFP--------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 317 (447)
Q Consensus 259 ~~~~~~--------------------~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 317 (447)
.+.... ...||+++..+.++..+++.+...+.++..++..+.++++.+.|.+. ++.++.
T Consensus 222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~ 301 (371)
T PF00266_consen 222 RPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLG 301 (371)
T ss_dssp HTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred ccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEee
Confidence 322111 12578999999999999999876778888899999999999999985 455544
Q ss_pred C---CCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCC---CCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 318 G---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG---DKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 318 ~---~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~---~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
+ .....++.+.+ .+.++.++.+.|++.||.+..+..-. .......++||+|++.++| ++|++++
T Consensus 302 ~~~~~~~~~i~~~~~--~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt----~~dv~~l 371 (371)
T PF00266_consen 302 PDDEPRRPSIVSFNL--PGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNT----EEDVDRL 371 (371)
T ss_dssp SSCGGBGTTEEEEEE--TTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSS----HHHHHHH
T ss_pred ecccccccceEEEee--cCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCC----HHHHhhC
Confidence 2 11223334444 46688999999999999997632110 0000012689999999999 9999975
No 21
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=1.4e-29 Score=233.78 Aligned_cols=339 Identities=19% Similarity=0.250 Sum_probs=245.8
Q ss_pred cCeeEecCC-C-CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcH-
Q 013217 21 KSLELIASE-N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS- 96 (447)
Q Consensus 21 ~~i~l~~~~-n-~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs- 96 (447)
+-|.|..++ . .+||+|++|+...+.+. ..|||.. . +++-+..+.|.++.++.+ ..+| |..+.|.
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~~----~----~~~~~ai~~w~~~r~~~~i~~e~---i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPYG----S----DELYAAIAHWFKQRHQWEIKPEW---IVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCCC----C----HHHHHHHHHHHHHhcCCCCCcce---EEEcCcch
Confidence 346665444 3 46999999999988875 3588743 2 234445568999999987 3455 2235555
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
.++..+++++.+|||.|++.+|.|...+ +.++..|+.+...|+..+.+.+.+|+++||+.+.+.++|+.+++
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~--------~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLC 165 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFY--------NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILC 165 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHH--------HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEe
Confidence 8999999999999999999998876543 35566777444444433434567899999999988788999999
Q ss_pred CCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-----ccc--EEEeCCCccc--CCCCCceE
Q 013217 177 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGGMI 242 (447)
Q Consensus 177 ~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-----~~D--i~~~s~~K~l--~Gp~gG~i 242 (447)
+|+||+ ++ ++.+|.+||.+||+.||+|+.| +.++..+..+.|+. .+| +.+.|.+|+| +|.+.+.+
T Consensus 166 nPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIH-aDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~ 244 (388)
T COG1168 166 NPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIH-ADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI 244 (388)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccc-ccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeE
Confidence 889886 44 5788899999999999999998 67776663333332 233 7778899997 68888777
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEeeeCCC
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGS 320 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~ 320 (447)
+..++ ++..+..+......+++|+...+.|..+|+++-. ++.++..+.+..|.+++++.|.+ +++++..+ .
T Consensus 245 Ii~n~-----~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~-~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p-~ 317 (388)
T COG1168 245 IISNR-----ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGE-PWLDELLEYLKDNRDYVADFLNKHLPGVKVTEP-Q 317 (388)
T ss_pred EecCH-----HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecC-C
Confidence 77664 6655544444444567889988888888988753 56789999999999999999988 58888764 5
Q ss_pred CCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
.+++.|+|++..+++..++.++| ++.+|.++.+...|. ...+.+|+.. .++|...++.+++++.+++
T Consensus 318 gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~---~g~gf~RlN~--acpr~~L~eal~ri~~al~ 385 (388)
T COG1168 318 GTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGE---EGSGFVRLNF--ACPRAILEEALERLKRALK 385 (388)
T ss_pred CceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCc---CCCceEEEec--CCCHHHHHHHHHHHHHHHh
Confidence 68999999999999887887765 678999987644433 2345688753 2333344666666665544
No 22
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=1.6e-29 Score=249.73 Aligned_cols=338 Identities=18% Similarity=0.215 Sum_probs=239.7
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 105 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~a 105 (447)
.++..++|+.|++++..++... .++|+..+..+..+.+.++ .+++++++++|++++++ +.+.+|++++..++.+
T Consensus 5 ~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~i---~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 5 NNATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVE-EAREQVAKLLGAEPDEI---IFTSGGTESDNTAIKS 78 (379)
T ss_pred CcCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCeE---EEeCcHHHHHHHHHHH
Confidence 4677789999999999888653 4666643323334444444 67889999999987543 2234566888888877
Q ss_pred hc---CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC
Q 013217 106 IL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 182 (447)
Q Consensus 106 l~---~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~ 182 (447)
++ .+||+|++...+|++....+. .+...|. +++.++++ +++.+|++++++++++ ++++|+++.+++++
T Consensus 79 ~~~~~~~~~~vv~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~t 149 (379)
T TIGR03402 79 ALAAQPEKRHIITTAVEHPAVLSLCQ-----HLEKQGY--KVTYLPVD-EEGRLDLEELRAAITD-DTALVSVMWANNET 149 (379)
T ss_pred HHHhcCCCCeEEEcccccHHHHHHHH-----HHHHcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCe
Confidence 63 567899998888876543221 1112343 44455555 4578999999999987 89999888655554
Q ss_pred --CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhh
Q 013217 183 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 259 (447)
Q Consensus 183 --~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~ 259 (447)
..|+++|.++|+++|+++++|++|+.|..+.++... ++|++++|+|| +.||.| |+++++++ . .+.
T Consensus 150 G~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~g~l~v~~~------~--~~~ 217 (379)
T TIGR03402 150 GTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM---NIDMLSLSGHK-LHGPKGVGALYIRKG------T--RFR 217 (379)
T ss_pred eecccHHHHHHHHHHcCCEEEEECcccccccccCcccC---CCCEEEEcHHH-cCCCCceEEEEECCC------C--CCC
Confidence 889999999999999999999999888665443332 48999999999 779999 99999874 1 111
Q ss_pred hcc------CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEeeeCCCC--CeeEEecC
Q 013217 260 NAV------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSD--NHLVLVDL 329 (447)
Q Consensus 260 ~~~------~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~--~~~~~v~~ 329 (447)
+.. .....|+++...+.++..+++.+.. ++++..++..++++.+.+.|.+ .++.+..+... ...+.+.+
T Consensus 218 p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR03402 218 PLLRGGHQERGRRAGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF 296 (379)
T ss_pred CcccCCccCCCcCCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe
Confidence 111 0123578999999999999988753 5677778888888899998874 47776653221 12232233
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCC--CCCCCC------------CCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNS--VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~--~p~~~~------------~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
.+.++.++...|.++||.++.++ .++... ....+.+|+|++.+|| ++|++++++.|++++
T Consensus 297 --~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t----~~di~~~~~~l~~~~ 370 (379)
T TIGR03402 297 --EYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT----EEDIDYVLEVLPPII 370 (379)
T ss_pred --cCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCC----HHHHHHHHHHHHHHH
Confidence 24567889999999999998642 111100 1124689999999999 999999999999887
Q ss_pred HH
Q 013217 396 EI 397 (447)
Q Consensus 396 ~~ 397 (447)
..
T Consensus 371 ~~ 372 (379)
T TIGR03402 371 AR 372 (379)
T ss_pred HH
Confidence 64
No 23
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=4.5e-29 Score=244.62 Aligned_cols=337 Identities=18% Similarity=0.211 Sum_probs=242.0
Q ss_pred cCeeEecCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcH
Q 013217 21 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 96 (447)
Q Consensus 21 ~~i~l~~~~n--~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs 96 (447)
+.|+|..+++ .+|+.+++++...+.+... .| + ..+...++.+.+.+++.+.+|.+ +++ +|.+|+|+
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y-----~-~~~G~~~LReaia~~~~~~~~~~~~~~~---eiivt~Ga 98 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HY-----T-PSAGIPELREAIAEKYKRRYGLDVDPEE---EIIVTAGA 98 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CC-----C-CCCCCHHHHHHHHHHHHHHhCCCCCCCC---eEEEeCCH
Confidence 4789988887 5788899998887765210 12 1 23335567777778899998854 432 36668888
Q ss_pred -HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC--CCCCCCHHHHHHHhhhhCCcEE
Q 013217 97 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 97 -~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~id~~~l~~~~~~~~~kli 173 (447)
+|+..+++++++|||+|++++|.|..+. ..+.+.|. ++++++++. .++.+|+++|++++++ +||+|
T Consensus 99 ~~al~~~~~a~~~pGDeVlip~P~Y~~y~--------~~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i 167 (393)
T COG0436 99 KEALFLAFLALLNPGDEVLIPDPGYPSYE--------AAVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKAI 167 (393)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCcCHH--------HHHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceEE
Confidence 9999999999999999999999877653 24456666 555555543 3689999999999999 99999
Q ss_pred EEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCCC--c---ccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y---CDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~~--~---~Di~~~s~~K~l--~Gp~gG 240 (447)
++++||||+ .. .+++|+++|++||+++++|++ +.++++.+. +++.+. . .-+++.|++|++ +|+|.|
T Consensus 168 ~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG 246 (393)
T COG0436 168 ILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIG 246 (393)
T ss_pred EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEeccccccccccccee
Confidence 999999997 33 478999999999999999999 588888773 444332 2 247889999985 799999
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcC-hhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 318 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 318 (447)
|++++++ ++.+.+.+.......+.+...+.++. .||+.-.. ...+...+...++++.+.+.|.+. |+.+..+
T Consensus 247 ~~v~~~~-----~l~~~~~~~~~~~~~~~~~~~Q~aa~-~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~ 320 (393)
T COG0436 247 WVVGPPE-----ELIAALRKLKSYLTSCAPTPAQYAAI-AALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKP 320 (393)
T ss_pred EeecChH-----HHHHHHHHHHHhcccCCCHHHHHHHH-HHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccC
Confidence 9999942 67776664333333455555555554 46665322 234555578899999999999985 5888774
Q ss_pred CCCCeeEEecCCCCCCCHHH-HHHHHhhcCeEEccCCCCCCC-CC-CCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 319 GSDNHLVLVDLRPMGIDGAR-VEKILDMASITLNKNSVPGDK-SA-LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 319 ~~~~~~~~v~~~~~~~~~~~-~~~~L~~~gI~v~~~~~p~~~-~~-~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+...+++|++++.. .+..+ +.++|++.||.+ +||.. +. ...+++|++.. +. ++++++..+.|.+.+
T Consensus 321 p~Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v----~PG~~Fg~~~g~~~vRis~~--~~----~~~l~~a~~rl~~~~ 389 (393)
T COG0436 321 PEGAFYLFPKIPEL-LDSEEFAKKLLEEAGVAV----VPGSGFGEPPGEGYVRLSLA--TS----EETLEEALRRLARFL 389 (393)
T ss_pred CCeeEEEEeecCCC-CCHHHHHHHHHHhCCEEE----ecccccCCCCCCCeEEEEEe--cC----HHHHHHHHHHHHHHH
Confidence 34577788888654 45544 556778899999 56654 22 24568999853 33 577777777777665
Q ss_pred H
Q 013217 396 E 396 (447)
Q Consensus 396 ~ 396 (447)
.
T Consensus 390 ~ 390 (393)
T COG0436 390 A 390 (393)
T ss_pred H
Confidence 4
No 24
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=3.6e-29 Score=247.09 Aligned_cols=335 Identities=19% Similarity=0.222 Sum_probs=232.4
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccC-chhHHHHHHHHHHHHHHHHcCCCCCccceeeecC-CcHHHHHHHHHHhcC
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILK 108 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~-g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~-sGs~a~~~~~~al~~ 108 (447)
+.|+.|++++.+.+.... +.++...|. +......+ +.+++++++++|++..+ +|..+ ++++++..++.++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREV-EETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHH-HHHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence 467899999988776421 122211111 11112222 34567899999987431 23334 556899989999999
Q ss_pred CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCCh
Q 013217 109 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY 186 (447)
Q Consensus 109 pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~ 186 (447)
+||+|++.+++|+++..... ......|. +++.++.+ .++.+|++++++++++ +|++|+++.+++++ ..|+
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLE----CLKEQIGV--EITIVKCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred CCCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCH
Confidence 99999999888776532110 01112243 45555555 4578999999999976 89999988766654 7899
Q ss_pred HHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhh-----
Q 013217 187 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN----- 260 (447)
Q Consensus 187 ~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~----- 260 (447)
++|.++|+++|+++++|++|+.|..+.+.... ++|++++|+|||++||.| |++++++.. ....+..
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~g~g~l~~~~~~-----~~~~~~~~~~~~ 228 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIPIDMTEL---AIDMLAFTGHKGLLGPQGTGGLYIREGI-----KLKPLKSGGTGS 228 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccCCCchhc---CCCEEEecccccccCCCCceEEEEcCCc-----CcCceecCCCcc
Confidence 99999999999999999999998775543322 589999999999999998 888777641 1000000
Q ss_pred ----------ccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCC-CC--CeeEE
Q 013217 261 ----------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG-SD--NHLVL 326 (447)
Q Consensus 261 ----------~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~-~~--~~~~~ 326 (447)
.......|+++...++++..+++++.+.+.+...++..+.++++.+.|.+ .|++++.+. +. ..++.
T Consensus 229 ~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~ 308 (376)
T TIGR01977 229 HSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVS 308 (376)
T ss_pred ccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEE
Confidence 00011246888888999999999988778888889999999999999986 678877531 11 23333
Q ss_pred ecCCCCCCCHHHHHHHHhhc-CeEEccCCCCCC-----CCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMA-SITLNKNSVPGD-----KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~-----~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
+.+ .+.++.++.+.|.+. ||.++.+..-.. .++...+.||++++.++| ++|+++++++|++
T Consensus 309 ~~~--~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t----~~dv~~~~~~l~~ 375 (376)
T TIGR01977 309 FTV--EGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNT----EEEIEKLLEALSE 375 (376)
T ss_pred EEE--CCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCC----HHHHHHHHHHHhh
Confidence 444 356788899999876 999976421100 012234689999999988 9999999999875
No 25
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.5e-28 Score=233.56 Aligned_cols=342 Identities=16% Similarity=0.153 Sum_probs=251.2
Q ss_pred CeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHH
Q 013217 22 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 101 (447)
Q Consensus 22 ~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~ 101 (447)
.+.|+|++..+++.|+++|.....+++ ..++.+.++ .+.+.++++|+.+... +.+...||+.++.+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~-----------s~~F~~~~~-~~~~~L~~v~~t~~~~--~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHR-----------SPDFVGIMK-EVLEKLRKVFGTENGD--VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCC-----------CHHHHHHHH-HHHHHHHHHhcCCCCc--EEEEcCCcHHHHHH
Confidence 588999999999999999987655432 234444444 5667899999998422 35667899999999
Q ss_pred HHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-CCcEEEEcCCCC
Q 013217 102 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY 180 (447)
Q Consensus 102 ~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-~~klii~~~~~~ 180 (447)
++.++++|||+||+... |.+..++. ..+...|. +++.+... ++..+|++++++++++. ..++|.+.+.-+
T Consensus 72 av~sl~~pgdkVLv~~n---G~FG~R~~---~ia~~~g~--~v~~~~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 72 AVASLVEPGDKVLVVVN---GKFGERFA---EIAERYGA--EVVVLEVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred HHHhccCCCCeEEEEeC---ChHHHHHH---HHHHHhCC--ceEEEeCC-CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 99999999999999863 33333321 23345555 34444444 55689999999999852 456777764433
Q ss_pred C--CCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCc--------
Q 013217 181 P--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV-------- 249 (447)
Q Consensus 181 ~--~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~-------- 249 (447)
+ ...|+++|+++|++||++++||++.+.|....+...+ ++|+++++.+|+|.+|+| |++.++++..
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~w---giDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~ 219 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEW---GIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKH 219 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhc---CccEEEecCchhccCCCccceeEECHHHHHHHhcCCC
Confidence 3 3779999999999999999999998878776555444 499999999999999999 9999987520
Q ss_pred --chhhHHHHhhhccC-CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCC-CCCeeE
Q 013217 250 --LGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-SDNHLV 325 (447)
Q Consensus 250 --~~~~~~~~i~~~~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~ 325 (447)
.+.++....+.... ..+..||..+.+.++..|++.++.+|++.+++++.++++++++.+.+.|++++... ..+..+
T Consensus 220 ~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tv 299 (383)
T COG0075 220 PSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTV 299 (383)
T ss_pred CceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCce
Confidence 01111111111111 23456889999999999999999999999999999999999999999999988732 123333
Q ss_pred EecCCCCCCCHHHHHH-HHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 326 ~v~~~~~~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..-..+.+++..++.. .++++||.+..+. .+.....+|||++...+ .+|+...+.+|..++...
T Consensus 300 ta~~~P~g~~~~~~~~~~~~~~g~~i~gg~-----~~l~gkifRIGhMG~~~----~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 300 TAIKVPEGVDDKKVRRALLKEYGVEIAGGQ-----GPLKGKIFRIGHMGNVR----PEDVLAALAALEAALREL 364 (383)
T ss_pred EEEECCCCCCcHHHHHHHHHhCCEEecccc-----cccCccEEEEecCccCC----HHHHHHHHHHHHHHHHHc
Confidence 3334566777655555 5567899985432 34455689999987555 999999999999999865
No 26
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=3.9e-29 Score=248.54 Aligned_cols=336 Identities=20% Similarity=0.209 Sum_probs=229.2
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYT 104 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~ 104 (447)
.++..++|+.+++++...+...+ ..++..| ........+.+.+++.+++++|+++++ |..++|+ +++..++.
T Consensus 23 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~ia~~~~~~~~~----v~~~~~~t~~l~~~~~ 95 (397)
T TIGR01976 23 NPAGTQIPQSVADAVSAALTRSN--ANRGGAY-ESSRRADQVVDDAREAVADLLNADPPE----VVFGANATSLTFLLSR 95 (397)
T ss_pred CCccCCCCHHHHHHHHHHHHhcC--CCCCCCc-hHHHHHHHHHHHHHHHHHHHcCCCCCe----EEEeCCHHHHHHHHHH
Confidence 46777889999999988775422 2222222 222222233345678899999998653 2334554 77666655
Q ss_pred Hh---cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCC
Q 013217 105 AI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 181 (447)
Q Consensus 105 al---~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~ 181 (447)
++ ++|||+|++.+++|.+++..+. ..+...|. +++.++++++++.+|++++++++++ +|++|+++.++++
T Consensus 96 ~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~ 168 (397)
T TIGR01976 96 AISRRWGPGDEVIVTRLDHEANISPWL----QAAERAGA--KVKWARVDEATGELHPDDLASLLSP-RTRLVAVTAASNT 168 (397)
T ss_pred HHHhcCCCCCEEEEcCCchHhHHHHHH----HHHHhcCC--EEEEEeccccCCCcCHHHHHHhcCC-CceEEEEeCCCCC
Confidence 54 7899999999988877542210 01233454 4445556544678999999999976 8999999866665
Q ss_pred C--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhh
Q 013217 182 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 259 (447)
Q Consensus 182 ~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~ 259 (447)
+ ..|+++|.++|+++|+++++|++|+.|....++... ++|++++|+|||+ ||+.|++++++ ++.+.+.
T Consensus 169 tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~d~~~~s~~K~~-g~~~G~l~~~~------~~~~~l~ 238 (397)
T TIGR01976 169 LGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQAT---GADFLTCSAYKFF-GPHMGILWGRP------ELLMNLP 238 (397)
T ss_pred CCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHc---CCCEEEEechhhc-CCceEEEEEcH------HHHhhCC
Confidence 4 789999999999999999999999776443222111 4899999999987 78889999987 5555544
Q ss_pred hccCC---------CCCCCCcHHHHHHHHHHHHHhcChh--------------HHHHHHHHHHHHHHHHHHHHHC-CcEe
Q 013217 260 NAVFP---------GLQGGPHNHTIGGLAVCLKHAQSPE--------------FKVYQNKVVSNCRALASRLVEL-GYKL 315 (447)
Q Consensus 260 ~~~~~---------~~~g~p~~~~~aal~~al~~~~~~~--------------~~~~~~~~~~~~~~l~~~L~~~-g~~~ 315 (447)
..... ...|+++...++++..|++.+...+ +++..++..+.++++.+.|++. ++++
T Consensus 239 ~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~ 318 (397)
T TIGR01976 239 PYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTL 318 (397)
T ss_pred CccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 32111 1257888888889988888765433 4555666777788888888875 4888
Q ss_pred eeC---CCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCC------CCCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 316 VSG---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD------KSALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 316 ~~~---~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~------~~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
+.+ ....+++.+.+. +.+..++.+.|.++||.++.+..... ..+...+.||+|++.++| ++|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~ 392 (397)
T TIGR01976 319 YGVARLAARVPTVSFTVH--GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNT----AEEVDR 392 (397)
T ss_pred eCCCCccCCCceEEEEeC--CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCC----HHHHHH
Confidence 754 123344444432 44678899999999999986421110 001124589999999998 999999
Q ss_pred HHHHH
Q 013217 387 IADFI 391 (447)
Q Consensus 387 l~~~i 391 (447)
++++|
T Consensus 393 l~~~l 397 (397)
T TIGR01976 393 LLEAL 397 (397)
T ss_pred HHHhC
Confidence 98764
No 27
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=3.8e-29 Score=246.61 Aligned_cols=337 Identities=18% Similarity=0.165 Sum_probs=236.8
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCc-ccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVY 103 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~-~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs~a~~~~~ 103 (447)
..+.+++|+.+++++.+.+... .++|... +..+....+ ....+++++++++|++ ++++ +.++++++++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~v---~~~~g~t~a~~~~~ 78 (373)
T cd06453 5 NAATSQKPQPVIDAIVDYYRHY--NANVHRGVHELSARATD-AYEAAREKVARFINAPSPDEI---IFTRNTTEAINLVA 78 (373)
T ss_pred CccccCCCHHHHHHHHHHHHhc--CCCCCCCccHHHHHHHH-HHHHHHHHHHHHhCCCCCCeE---EEeCCHHHHHHHHH
Confidence 4677788999999998888653 2454432 222223333 3335678999999998 4422 22344558988888
Q ss_pred HHhcC---CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCC
Q 013217 104 TAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 180 (447)
Q Consensus 104 ~al~~---pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~ 180 (447)
.++.. +||+|++.+++|++.+.... ...+..|. +++.++++ +++.+|++++++.+.+ ++++|+++.+++
T Consensus 79 ~~l~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~ 150 (373)
T cd06453 79 YGLGRANKPGDEIVTSVMEHHSNIVPWQ----QLAERTGA--KLKVVPVD-DDGQLDLEALEKLLTE-RTKLVAVTHVSN 150 (373)
T ss_pred HHhhhcCCCCCEEEECcchhHHHHHHHH----HHHhhcCc--EEEEeecC-CCCCcCHHHHHHHhcC-CceEEEEeCccc
Confidence 88876 99999999988877532111 01123454 44444455 4678999999999987 899999987666
Q ss_pred CC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHh
Q 013217 181 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 258 (447)
Q Consensus 181 ~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i 258 (447)
++ ..|+++|.++|+++|+++++|++|+.|..+.+.... ++|++++|+||++++++.|++++++ ++.+.+
T Consensus 151 ~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~g~g~~~~~~------~~~~~~ 221 (373)
T cd06453 151 VLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDL---GCDFLAFSGHKMLGPTGIGVLYGKE------ELLEEM 221 (373)
T ss_pred ccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeecccc---CCCEEEeccccccCCCCcEEEEEch------HHhhcC
Confidence 54 779999999999999999999999877654332211 4899999999999875559999887 455544
Q ss_pred hhccCC--------------------CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeee
Q 013217 259 NNAVFP--------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 317 (447)
Q Consensus 259 ~~~~~~--------------------~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 317 (447)
...... ...|+|+...+.++..+++.+...++++..++..+.++++.+.|++. |++++.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 301 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG 301 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 432110 11367888888888889998877778888888899999999999885 688774
Q ss_pred CC-CCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC---CCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 318 GG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 318 ~~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
+. ....++++.+. +.+..++.+.|.++||.+..+...... ..-.++.||++++.++| ++|+++++++|
T Consensus 302 ~~~~~~~~~~~~~~--~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~~~~~l 373 (373)
T cd06453 302 DAEDRAGVVSFNLE--GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNT----EEEIDALVEAL 373 (373)
T ss_pred CccccCCeEEEEEC--CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCC----HHHHHHHHhhC
Confidence 32 23344455543 456788999999999998654211000 00124589999999988 99999998864
No 28
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=3.9e-29 Score=247.13 Aligned_cols=342 Identities=13% Similarity=0.126 Sum_probs=239.1
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc-HHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYT 104 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~ 104 (447)
.++..++|+.|++++..++...+ ++++..+..+....+.+ +.+++.+++++|+++++ |..++| ++++..++.
T Consensus 6 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~r~~la~~~g~~~~~----i~~~~g~t~a~~~~~~ 78 (381)
T PRK02948 6 YAATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLL-QVCRKTFAEMIGGEEQG----IYFTSGGTESNYLAIQ 78 (381)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHH-HHHHHHHHHHhCCCCCe----EEEeCcHHHHHHHHHH
Confidence 46677889999999988776533 44544444444444444 46788999999998753 334666 588888887
Q ss_pred Hhc----CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCC
Q 013217 105 AIL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 180 (447)
Q Consensus 105 al~----~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~ 180 (447)
+++ ++||+|++.+.+|++...... .+...|. ++..++++ +++.+|++++++.+++ ++++|+++++++
T Consensus 79 ~~~~~~~~~g~~vv~~~~~h~s~~~~~~-----~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n 149 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYFQ-----SLESQGY--TVTEIPVD-KSGLIRLVDLERAITP-DTVLASIQHANS 149 (381)
T ss_pred HHHHhccCCCCEEEECCcccHHHHHHHH-----HHHhCCC--EEEEEeeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcC
Confidence 775 679999998888876543211 1223344 44455565 4578999999999876 889999987776
Q ss_pred CC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHH
Q 013217 181 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 257 (447)
Q Consensus 181 ~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~ 257 (447)
++ ..|+++|.++|+++|+++++|++|..|..+.+.... ++|++++|+||+ .||.| |+++++++. ....
T Consensus 150 ~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~---~~d~~~~s~~K~-~gp~G~G~l~~~~~~-----~~~~ 220 (381)
T PRK02948 150 EIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM---GIDSLSVSAHKI-YGPKGVGAVYINPQV-----RWKP 220 (381)
T ss_pred CcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC---CCCEEEecHHhc-CCCCcEEEEEEcCCC-----CCCC
Confidence 65 789999999999999999999999888654443322 489999999996 57888 999988741 0111
Q ss_pred hhh---ccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCe-e-EEecCCCC
Q 013217 258 INN---AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH-L-VLVDLRPM 332 (447)
Q Consensus 258 i~~---~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~-~-~~v~~~~~ 332 (447)
+.. .......|+++...++++..+++... .+.++..+++.++++++.+.|++.|+++...+..++ + .++.+...
T Consensus 221 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~ 299 (381)
T PRK02948 221 VFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK 299 (381)
T ss_pred cccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC
Confidence 100 00111357888888988888988765 356777899999999999999988876654321121 1 12322233
Q ss_pred CCCHHHHHHHHhhcCeEEccCCC-------CCC-------CCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 333 GIDGARVEKILDMASITLNKNSV-------PGD-------KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 333 ~~~~~~~~~~L~~~gI~v~~~~~-------p~~-------~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
++++.++...|.++||.++.+.. |.. ..+...+.+|+|++.++| ++|++++.++|+++++.
T Consensus 300 ~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t----~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 300 GIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTT----KDQIDTTIHALETIGNQ 374 (381)
T ss_pred CCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCC----HHHHHHHHHHHHHHHHH
Confidence 45677788888889999986421 100 001124689999999988 99999999999987753
No 29
>PLN02651 cysteine desulfurase
Probab=99.97 E-value=4.3e-29 Score=245.07 Aligned_cols=328 Identities=17% Similarity=0.196 Sum_probs=228.2
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 104 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~ 104 (447)
.++..++|+.|++++..++.+.+ ++|+. .+..+....+.++ .+++.+++++|++++++ +.++++++++..++.
T Consensus 5 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~v---~~t~~~t~a~~~~l~ 78 (364)
T PLN02651 5 MQATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVE-KARAQVAALIGADPKEI---IFTSGATESNNLAIK 78 (364)
T ss_pred CcCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCCeE---EEeCCHHHHHHHHHH
Confidence 46677899999999998886544 45543 1212223333344 67789999999987643 223455688776665
Q ss_pred Hh----cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCC
Q 013217 105 AI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 180 (447)
Q Consensus 105 al----~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~ 180 (447)
++ .++||+|++.+.+|++...... .+...|. +++.++++ +++.+|++++++++++ ++++|+++.+++
T Consensus 79 ~~~~~~~~~g~~vl~~~~~h~s~~~~~~-----~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n 149 (364)
T PLN02651 79 GVMHFYKDKKKHVITTQTEHKCVLDSCR-----HLQQEGF--EVTYLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVNN 149 (364)
T ss_pred HHHHhccCCCCEEEEcccccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCC
Confidence 54 5789999999888876532211 1122343 44455555 4578999999999987 899998886555
Q ss_pred CC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHH
Q 013217 181 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 257 (447)
Q Consensus 181 ~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~ 257 (447)
++ ..|+++|.++|+++|+++++|++|+.|.++.++... ++|++++|+||| .||.| |+++++++ ....
T Consensus 150 ~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~---~~D~~~~s~hK~-~gp~G~g~l~v~~~------~~~~ 219 (364)
T PLN02651 150 EIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL---GVDLMSISGHKI-YGPKGVGALYVRRR------PRVR 219 (364)
T ss_pred CceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC---CCCEEEechhhh-CCCCceEEEEEcCC------CCCC
Confidence 54 789999999999999999999999998776554433 489999999997 78998 99999884 2233
Q ss_pred hhhccC------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEeeeCC-CCCe-eEEe
Q 013217 258 INNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGG-SDNH-LVLV 327 (447)
Q Consensus 258 i~~~~~------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~-~~~~-~~~v 327 (447)
+..... ....|||+...++++..|++.+.. +.++..++..+.++++.+.|++ .|++++.+. .+.+ ..++
T Consensus 220 l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~ 298 (364)
T PLN02651 220 LEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTL 298 (364)
T ss_pred CCccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEE
Confidence 322211 123689999999999999998874 4577778888889999999875 388888741 1111 1133
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCC--CCCC-----C----C---CCCCCeEEEecCccccCCCCHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNS--VPGD-----K----S---ALVPGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~--~p~~-----~----~---~~~~~~iRig~~~~~~~g~~~~di~ 385 (447)
.+...+++++++.+.|.+ |.++.+. -+.. . + ....+.+|+|++.+|| ++|++
T Consensus 299 ~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t----~~did 364 (364)
T PLN02651 299 NLSFAYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTT----EEEVD 364 (364)
T ss_pred EEEeCCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCC----HHHcC
Confidence 333346788899999976 8887642 1110 0 0 0124689999999999 88874
No 30
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=2e-28 Score=242.12 Aligned_cols=342 Identities=17% Similarity=0.203 Sum_probs=237.1
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC-CCCccceeeecCCcH-HHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PANFEVY 103 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~-~~~~~~~~v~~~sGs-~a~~~~~ 103 (447)
.++.++.++.|++++..++.+.| ++|+..+..+......++ .++..+.+.+|+ ++++ |.+++|+ +++..++
T Consensus 5 ~aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~-~a~~~~~~~~~~~~~~~----i~~t~g~teal~~~~ 77 (382)
T TIGR03403 5 NNATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIA-EALDKLYKGINARDLDD----IIITSCATESNNWVL 77 (382)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHH-HHHHHHHHHcCcCCCCe----EEEeCCHHHHHHHHH
Confidence 35677889999999999887654 455543333344455665 345566677787 4543 3346665 8888888
Q ss_pred HHhc-----CC-CCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 104 TAIL-----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 104 ~al~-----~p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
.++. ++ +|+|++...+|+++..... .+...|. +++.++++ +++.+|++++++++++ ++++|+++.
T Consensus 78 ~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~ 148 (382)
T TIGR03403 78 KGVYFDEILKGGKNHIITTEVEHPAVRATCA-----FLESLGV--EVTYLPIN-EQGTITAEQVREAITE-KTALVSVMW 148 (382)
T ss_pred HHHHHhhcccCCCCEEEEcCCccHHHHHHHH-----HHHHCCC--EEEEEecC-CCCCCCHHHHHHhccc-CCeEEEEEc
Confidence 7752 55 4789999888877643221 1223343 55555565 4578999999999977 899998886
Q ss_pred CCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhH
Q 013217 178 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 254 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~ 254 (447)
++|++ ..|+++|.++|+++|+++++|++|+.|.++.++... ++|++++|+||| .||+| |+++++++.. +
T Consensus 149 ~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~-~gp~G~g~l~vr~~~~----~ 220 (382)
T TIGR03403 149 ANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKA---GVDFLSFSAHKF-HGPKGVGGLYIRKGVE----L 220 (382)
T ss_pred ccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCcccc---CCCEEEEcchhh-CCCCceEEEEECCCCC----C
Confidence 66664 789999999999999999999999887654433222 489999999997 58988 9999887421 1
Q ss_pred HHHhh--hccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCC--CCeeEEecC
Q 013217 255 ESAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNHLVLVDL 329 (447)
Q Consensus 255 ~~~i~--~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~--~~~~~~v~~ 329 (447)
...+. ........|+++...+.+++.+++.... ..+...+++.+.++++.+.|.+ .|++++.+.. ..+++.+.+
T Consensus 221 ~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T TIGR03403 221 TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISI 299 (382)
T ss_pred CCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEe
Confidence 01010 0011122578899999888989887653 3566677888888899999987 5788775421 123444444
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCCC--CCCC------------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNSV--PGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~~--p~~~------------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
.++++..+.+.|.++||.++.++. +... .+...+.||+|++.+|| ++|++++++.|++++
T Consensus 300 --~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t----~~did~~~~~l~~~~ 373 (382)
T TIGR03403 300 --KGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTT----EEEIDYTIEVFKKAV 373 (382)
T ss_pred --CCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCC----HHHHHHHHHHHHHHH
Confidence 356788888889999999986421 1110 01123579999999999 999999999999887
Q ss_pred HHH
Q 013217 396 EIT 398 (447)
Q Consensus 396 ~~~ 398 (447)
+..
T Consensus 374 ~~~ 376 (382)
T TIGR03403 374 QRL 376 (382)
T ss_pred HHH
Confidence 653
No 31
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=7.2e-28 Score=236.53 Aligned_cols=334 Identities=14% Similarity=0.076 Sum_probs=231.2
Q ss_pred cCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHH
Q 013217 21 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 100 (447)
Q Consensus 21 ~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~ 100 (447)
+.+.|+|++..++++|++++.....+ .+.++.+.++ .+++.+++++|+++++. ..+.+.||++++.
T Consensus 3 ~~~l~~pgp~~~~~~v~~~~~~~~~~------------~~~~~~~~~~-~~r~~la~l~~~~~~~~-~i~~t~~~t~al~ 68 (363)
T TIGR02326 3 NYLLLTPGPLTTSRTVKEAMLFDWCT------------WDSDYNIVVE-QIRQQLLALATAEEGYT-SVLLQGSGTFAVE 68 (363)
T ss_pred ceeEecCCCCCCCHHHHHHhCCCCCC------------CChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCCHHHHH
Confidence 45678999999999999998654311 1234455554 57889999999975321 1234567789999
Q ss_pred HHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-CCcEEEEcCCC
Q 013217 101 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA 179 (447)
Q Consensus 101 ~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-~~klii~~~~~ 179 (447)
.++.+++.+||++++..+.+.+. .+. ..+...|. +++.++++ +++.+|+++++++++.. ++++|.+..+.
T Consensus 69 ~~~~~l~~~~~~vlv~~~~~~~~---~~~---~~a~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 139 (363)
T TIGR02326 69 AVIGSAVPKDGKLLVVINGAYGA---RIV---QIAEYLGI--PHHVVDTG-EVEPPDVVEVEAILAADPAITHIALVHCE 139 (363)
T ss_pred HHHHhcCCCCCeEEEEeCChhhH---HHH---HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCccEEEEEeec
Confidence 99999999999877755432211 000 11233444 34444454 45679999999998762 35666666444
Q ss_pred CCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHH
Q 013217 180 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 256 (447)
Q Consensus 180 ~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~ 256 (447)
+++ ..|+++|.++|+++|+++++|++|+.|..+.++... ++|++++|+||||+||.| |++++++ +..+
T Consensus 140 ~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~G~G~l~~~~------~~~~ 210 (363)
T TIGR02326 140 TTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAEL---HIDYLISSANKCIQGVPGFGFVIARQ------AELA 210 (363)
T ss_pred CCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhc---CccEEEecCccccccCCcceEEEECH------HHHH
Confidence 433 789999999999999999999999877654433222 489999999999999988 9999987 3433
Q ss_pred Hhhhcc----------------CCC-CCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHCCcEeeeC
Q 013217 257 AINNAV----------------FPG-LQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSG 318 (447)
Q Consensus 257 ~i~~~~----------------~~~-~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 318 (447)
++.... .++ ...+++.+.+.++..|++.+... ++++..+++.++++++.+.|.+.|+.++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 290 (363)
T TIGR02326 211 ACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLD 290 (363)
T ss_pred HhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccC
Confidence 332100 011 12356677788888888877554 477788999999999999999899887653
Q ss_pred C-CCCe-eEEecCCCC-CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 319 G-SDNH-LVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 319 ~-~~~~-~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
. ..+. ..++.+.+. ..+...+.+.|.++||.++.+..+ ...+||+|++.+++ .+|+++++++|++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~------~~~~iRi~~~~~~~----~edv~~~l~~l~~~l 360 (363)
T TIGR02326 291 DEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVS------QVDCFRIGNIGEVD----AADITRLLTAIGKAM 360 (363)
T ss_pred cccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCC------CCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 2 1232 234444321 246678889999999999654211 23589999877777 999999999998875
Q ss_pred H
Q 013217 396 E 396 (447)
Q Consensus 396 ~ 396 (447)
.
T Consensus 361 ~ 361 (363)
T TIGR02326 361 Y 361 (363)
T ss_pred C
Confidence 3
No 32
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=1e-27 Score=238.32 Aligned_cols=340 Identities=17% Similarity=0.169 Sum_probs=232.1
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 105 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~a 105 (447)
.++..++|+.|++++..++...+ ++|+.+.+.........-+.+++.+++++|++++++ +.++++++++..++.+
T Consensus 9 ~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v---~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 9 YAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVENARNQVAELIGADSREI---VFTSGATESNNLAIKG 83 (402)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeE---EEeCCHHHHHHHHHHH
Confidence 46667889999999988876543 445432111111122333466788999999987643 2234445888877766
Q ss_pred h----cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCC
Q 013217 106 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 181 (447)
Q Consensus 106 l----~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~ 181 (447)
+ .++||+|++..++|.+....+. .+...|. +++.++++ +++.+|++++++++++ ++++|+++.++++
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~-----~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~ 154 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCR-----YLEREGF--EVTYLPPK-SNGLIDLEELKAAIRD-DTILVSIMHVNNE 154 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECCCcC
Confidence 5 3789999999988876543221 1112343 44555555 4578999999999977 7899988866665
Q ss_pred C--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHh
Q 013217 182 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 258 (447)
Q Consensus 182 ~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i 258 (447)
+ ..|+++|.++|+++|+++++|++|+.|.++.++... ++|++++|+||+ .||.| |+++++++ ...++
T Consensus 155 tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~---~~D~~~~s~~K~-~gp~G~G~l~~~~~------~~~~~ 224 (402)
T TIGR02006 155 IGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNEL---KVDLMSISGHKI-YGPKGIGALYVRRK------PRVRL 224 (402)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcccc---CCCEEEEehhhh-cCCCceEEEEEccC------CCCCC
Confidence 4 789999999999999999999999988765443322 489999999996 57988 99998873 22222
Q ss_pred hhccC------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCC--CCeeEEecC
Q 013217 259 NNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNHLVLVDL 329 (447)
Q Consensus 259 ~~~~~------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~--~~~~~~v~~ 329 (447)
..... ....|+++...++++..+++.+. .+++...++..+.++++.+.|++ .++.+..+.. ..+...+.+
T Consensus 225 ~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f 303 (402)
T TIGR02006 225 EALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSF 303 (402)
T ss_pred CceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEE
Confidence 22111 11357899999999999998876 46777778888888999999877 4676654321 112223444
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCC--CCCCC------------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNS--VPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~--~p~~~------------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
. +++++.+...| .+|.++.+. .+... .....+.+|+|++.+|| ++|++++++.|++++
T Consensus 304 ~--~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t----~edid~l~~~l~~~~ 375 (402)
T TIGR02006 304 N--YVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTT----EEEIDYAVKLVKSAI 375 (402)
T ss_pred e--CcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCC----HHHHHHHHHHHHHHH
Confidence 3 34566666666 467665432 22111 01123689999999998 999999999999988
Q ss_pred HHH
Q 013217 396 EIT 398 (447)
Q Consensus 396 ~~~ 398 (447)
+..
T Consensus 376 ~~~ 378 (402)
T TIGR02006 376 DKL 378 (402)
T ss_pred HHH
Confidence 764
No 33
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=5.7e-27 Score=230.64 Aligned_cols=333 Identities=14% Similarity=0.094 Sum_probs=231.5
Q ss_pred eeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHH
Q 013217 23 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 102 (447)
Q Consensus 23 i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~ 102 (447)
..++|+...+++.++++|...+.. ...++.+.+ +.+++.+++++|++++.. ..+.+.||+.++..+
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~~~------------~~~~~~~~~-~~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDWGS------------WDDDFNALT-ASVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAA 72 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCCCC------------CChHHHHHH-HHHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHH
Confidence 457899999999999998764311 112344444 466789999999965322 233457888999999
Q ss_pred HHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-CCcEEEEcCCCCC
Q 013217 103 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYP 181 (447)
Q Consensus 103 ~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-~~klii~~~~~~~ 181 (447)
+.++..+||+|++.++.+.+.. + ...+...|. +++.++.+ +++.+|++++++.+++. ++++|++++++++
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~~---~---~~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 143 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGAR---I---AQIAEYLGI--AHVVLDTG-EDEPPDAAEVEAALAADPRITHVALVHCETT 143 (368)
T ss_pred HHhccCCCCeEEEEeCCchHHH---H---HHHHHHcCC--cEEEEECC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCc
Confidence 9999999999998875433220 0 011233454 34444454 34679999999988752 4567777766554
Q ss_pred C--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHh
Q 013217 182 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 258 (447)
Q Consensus 182 ~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i 258 (447)
+ ..|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+|||+.||.| |++++++ +..+.+
T Consensus 144 tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~---~~d~~v~s~~K~l~g~~G~G~l~~~~------~~~~~~ 214 (368)
T PRK13479 144 TGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAEL---GIDALISSANKCIEGVPGFGFVIARR------SELEAC 214 (368)
T ss_pred cccccCHHHHHHHHHHcCCEEEEEcccccCCcccccccc---CceEEEecCccccccCCCceEEEECH------HHHHHh
Confidence 3 789999999999999999999988777543332222 489999999999999988 9999987 454444
Q ss_pred hhccCC----------------CCCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC-
Q 013217 259 NNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSGGS- 320 (447)
Q Consensus 259 ~~~~~~----------------~~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~- 320 (447)
.....+ ....+++...++++..+++.+... ++++..+++.++++.+.+.|.+.|++++.++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 294 (368)
T PRK13479 215 KGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEI 294 (368)
T ss_pred hcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchh
Confidence 332111 111267777888888888877544 36777889999999999999999988764321
Q ss_pred CCe-eEEecCCC-CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 321 DNH-LVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 321 ~~~-~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+. ...+.+.. .+++..++.+.|.++||.+..+..+ ..+.+|+|+..+++ ++|++++++.|++++..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~------~~~~iRis~~~~~t----~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 295 QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLT------QVDTFRIGCIGDVD----AADIRRLVAAIAEALYW 363 (368)
T ss_pred cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCC------CCCEEEEecCCCCC----HHHHHHHHHHHHHHHHH
Confidence 111 12222221 2346678999999999999643111 13579999877777 99999999999988764
No 34
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.96 E-value=2.6e-27 Score=235.69 Aligned_cols=339 Identities=14% Similarity=0.088 Sum_probs=224.9
Q ss_pred hcCeeEe-cCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHH
Q 013217 20 FKSLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 98 (447)
Q Consensus 20 ~~~i~l~-~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a 98 (447)
++.+.|. .+..++|+.|.+++..++.. |..+..+.++.+...+.. +.+.. +.+ +++|++++++ +.+.++|++
T Consensus 26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~-~~~-~l~g~~~~~v---~~~~~~t~~ 98 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGHNTGKAPWFT-LDESL-LKL-RLVGAKEDEV---VVMNTLTIN 98 (406)
T ss_pred CCcEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccCccCCCChhh-hhhhh-ccc-cccCCCCCcE---EEeCCchHH
Confidence 3457776 66667899999999877643 322211122211112222 22222 235 8999988754 223455688
Q ss_pred HHHHHHHhcCCCC---EEEEecCCCCcccCCCccccccccccccceeE--EEecccCCCCCCCCHHHHHHHhhh--hCCc
Q 013217 99 NFEVYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--SMPYRLDESTGLVDYDMLEKTAIL--FRPK 171 (447)
Q Consensus 99 ~~~~~~al~~pgd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~id~~~l~~~~~~--~~~k 171 (447)
+..++.++++||+ .|++.+.+|++....+. ..+...|..+. .+.++.+ +++.+|++++++.++. .+|+
T Consensus 99 l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~----~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~ 173 (406)
T TIGR01814 99 LHLLLASFYKPTPKRYKILLEAKAFPSDHYAIE----SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIA 173 (406)
T ss_pred HHHHHHHhcCCcCCccEEEecCCCCChHHHHHH----HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeE
Confidence 8888888877653 57777777776432110 01122343221 1233333 3567899999988752 3789
Q ss_pred EEEEcCCCCC-C-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCceEEeecCCc
Q 013217 172 LIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPV 249 (447)
Q Consensus 172 lii~~~~~~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~ 249 (447)
+|++++.++. + ..|+++|+++|+++|+++++|++|+.|.++.++... ++|++++|+||||+||+||++++.++
T Consensus 174 lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~---gvD~~~~s~hK~l~g~pG~~l~v~~~-- 248 (406)
T TIGR01814 174 VILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDW---GVDFACWCTYKYLNAGPGAGAFVHEK-- 248 (406)
T ss_pred EEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccC---CCCEEEEcCccccCCCCCeEEEEehh--
Confidence 9988854443 3 789999999999999999999999999886655433 48999999999998766766666553
Q ss_pred chhhHHHHhhhcc----------------------CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 013217 250 LGVELESAINNAV----------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 307 (447)
Q Consensus 250 ~~~~~~~~i~~~~----------------------~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (447)
.. ..+.... .....|||+...++++..|++.+.+.+.+...++..+.++++.+.
T Consensus 249 ---~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 324 (406)
T TIGR01814 249 ---HA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEEL 324 (406)
T ss_pred ---hh-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 11 1111100 001147899999999999999987778888888899999999998
Q ss_pred HHHC-----CcEeeeCCC---CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEec-CccccCC
Q 013217 308 LVEL-----GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRG 378 (447)
Q Consensus 308 L~~~-----g~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~-~~~~~~g 378 (447)
|.+. |++++++.. ...++.+.+. .+++++.+.|.++||.+... .++.||+|+ +.+||
T Consensus 325 l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~~~gi~v~~~---------~~~~iRiS~~~~~nt-- 390 (406)
T TIGR01814 325 IKARCGGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALIKRGVIGDKR---------EPSVIRVAPVPLYNT-- 390 (406)
T ss_pred HHhhcCCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHHHCCEEEecc---------CCCeEEEechhccCC--
Confidence 8773 477776421 1223333332 36788999999999987421 135899998 67888
Q ss_pred CCHHHHHHHHHHHHHHH
Q 013217 379 FSEKEFVAIADFIHEGV 395 (447)
Q Consensus 379 ~~~~di~~l~~~i~~~l 395 (447)
++|+++++++|++++
T Consensus 391 --~~did~l~~~l~~~~ 405 (406)
T TIGR01814 391 --FVDVYDAVNVLEEIL 405 (406)
T ss_pred --HHHHHHHHHHHHHHh
Confidence 999999999998754
No 35
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=6.2e-27 Score=233.92 Aligned_cols=339 Identities=17% Similarity=0.216 Sum_probs=232.3
Q ss_pred cCeeEecCCC---CCCH----HHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecC
Q 013217 21 KSLELIASEN---FTSR----AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 93 (447)
Q Consensus 21 ~~i~l~~~~n---~~~~----~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~ 93 (447)
+.++|..++. +.++ ++.+++...+... ...|++.....+++ +.+++++|.+. .+.++
T Consensus 37 ~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lr----eaia~~~~~~~-----vv~t~ 100 (460)
T PRK13238 37 NPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-------DEAYAGSRSYYRLE----DAVKDIFGYPY-----TIPTH 100 (460)
T ss_pred CEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-------CcccCCCCCHHHHH----HHHHHHhCCCc-----EEECC
Confidence 6778777665 3332 4666666555331 12245555567777 46788888764 24456
Q ss_pred CcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC---------CCCCCCHHHHHHH
Q 013217 94 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE---------STGLVDYDMLEKT 164 (447)
Q Consensus 94 sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~id~~~l~~~ 164 (447)
+|++|+..++.++++||| |+++++.+..+. ..+...|. +++.+++++ .++.+|+++|+++
T Consensus 101 ggt~A~~~~~~all~pGD-Vii~~p~~~~~~--------~~i~~~G~--~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~ 169 (460)
T PRK13238 101 QGRAAEQILFPVLIKKGD-VVPSNYHFDTTR--------AHIELNGA--TAVDLVIDEALDTGSRHPFKGNFDLEKLEAL 169 (460)
T ss_pred CHHHHHHHHHHHhCCCCC-EEccCCcccchH--------HHHHHcCC--EEEEEeccccccccccccccCCcCHHHHHHH
Confidence 777999999999999999 887766443321 12345565 444444432 2345999999999
Q ss_pred hhh---hCCcEEEEcCCCCCC---CC---ChHHHHHHHHHhCCEEEEehhhhcc-cccc-----ccCCCC--------CC
Q 013217 165 AIL---FRPKLIIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMAHISG-LVAA-----SVVADP--------FK 221 (447)
Q Consensus 165 ~~~---~~~klii~~~~~~~~---~~---~~~~i~~ia~~~g~~livD~a~~~g-~~~~-----~~~~~~--------~~ 221 (447)
+++ .+|++|+++.++|++ .. ++++|+++|++||+++++|++|..+ +.+. +..... ..
T Consensus 170 i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s 249 (460)
T PRK13238 170 IEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFS 249 (460)
T ss_pred HhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcc
Confidence 985 268999999777763 33 4679999999999999999998653 2221 111111 13
Q ss_pred cccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhccC--CC--CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHH
Q 013217 222 YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVF--PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 297 (447)
Q Consensus 222 ~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~--~~--~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~ 297 (447)
.+|++++|++|.+.+|.||+++++++ ++.++++.... .+ .+|+++...++|++.++++...+. +....
T Consensus 250 ~~D~~~~Sg~K~g~~~~GG~i~~~d~-----~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~---~~~~~ 321 (460)
T PRK13238 250 YADGLTMSAKKDAMVNIGGLLCFRDE-----DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDED---YLAYR 321 (460)
T ss_pred cCcEEEEecccCCCCcceeEEEcChH-----HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChH---HHHHH
Confidence 58999999999999999999999864 78887776542 22 356666666788888888765543 34455
Q ss_pred HHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC-------CCCHH-HHHHHHhhcCeEEccCC---CCCCCCC-----
Q 013217 298 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GIDGA-RVEKILDMASITLNKNS---VPGDKSA----- 361 (447)
Q Consensus 298 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-------~~~~~-~~~~~L~~~gI~v~~~~---~p~~~~~----- 361 (447)
.+++++|.+.|.+.|++++.+ ...|++++|+... +..+. .+..++++.||.+.... .+.+...
T Consensus 322 ~~~~~~l~~~L~~~G~~~~~p-~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~ 400 (460)
T PRK13238 322 IGQVEYLGEGLEEAGVPIQTP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLP 400 (460)
T ss_pred HHHHHHHHHHHHHCCCCeEcc-CCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccC
Confidence 667899999999999998864 4578888988642 12233 45566688999985432 2222211
Q ss_pred CCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 362 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 362 ~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
.....+|++++ .|+.+.+.++++++.|.++.+..
T Consensus 401 ~~~~~~Rla~~---rr~~~~~~~~~~~~~l~~~~~~~ 434 (460)
T PRK13238 401 APAELLRLAIP---RRVYTQSHMDYVAEALKAVKENR 434 (460)
T ss_pred CccceEEEecc---cccCCHHHHHHHHHHHHHHHHhH
Confidence 11468999976 68889999999999999987654
No 36
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=9.2e-27 Score=231.25 Aligned_cols=332 Identities=19% Similarity=0.224 Sum_probs=227.8
Q ss_pred CeeEecCCCC----CCHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH
Q 013217 22 SLELIASENF----TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 96 (447)
Q Consensus 22 ~i~l~~~~n~----~~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs 96 (447)
.|++. +.+| .+|.+++++...+.. |..||++.++..| .+...++| +.+++++|.+. .+.++||+
T Consensus 40 ~i~~~-~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~~ 108 (393)
T TIGR01822 40 VLNFC-ANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASCF 108 (393)
T ss_pred EEEee-CCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECchH
Confidence 35554 3344 378899998887754 4458888887766 34445555 68889999864 23347888
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-----CCc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK 171 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-----~~k 171 (447)
+|+..++.++++|||+|++.++.|.++.. .+...+. ..+.+ ..+|++++++++++. +|+
T Consensus 109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~--------~~~~~~~--~~~~~------~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 109 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRY------ANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred HHHHHHHHHhCCCCCEEEEeccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhhhcCCCce
Confidence 99999999999999999999998877542 1222332 12221 248999999988752 677
Q ss_pred EEEEcCCCCC-C-CCChHHHHHHHHHhCCEEEEehhhhccccccccC----CCCC-CcccEEEeCCCcccCCCCCceEEe
Q 013217 172 LIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPF-KYCDVVTTTTHKSLRGPRGGMIFF 244 (447)
Q Consensus 172 lii~~~~~~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~----~~~~-~~~Di~~~s~~K~l~Gp~gG~i~~ 244 (447)
+|++++.+++ + ..|+++|.++|++||+++++|++|..|....... ...+ +.+|++++|+||+++|+++|++++
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~ 252 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTA 252 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEe
Confidence 8877754444 3 6799999999999999999999997776532110 0111 247899999999999999999998
Q ss_pred ecCCcchhhHHHHhhhccCCC-CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCe
Q 013217 245 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 323 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~-~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 323 (447)
++ ++.+.+.....+. ..++++...+++...+++.+. +.++..+++.++++++.+.|.+.|+.+..+ ...
T Consensus 253 ~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~ 322 (393)
T TIGR01822 253 RK------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKPA--DHP 322 (393)
T ss_pred CH------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCC
Confidence 87 6777665532222 234445555555556676543 245667888999999999998888876532 222
Q ss_pred eEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 324 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
++.+.+.. ..+..++.+.|.++||.+.....|. .+....++|++++..++ ++|++++++.|.++++.
T Consensus 323 ~~~i~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~~~~iRis~~~~~t----~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 323 IIPVMLYD-AVLAQRFARRLLEEGIYVTGFFYPV--VPKGQARIRVQISAAHT----EEQLDRAVEAFTRIGRE 389 (393)
T ss_pred EEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCC--CCCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHH
Confidence 33333221 1245678888888899986322221 11123479999998888 99999999999887653
No 37
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.96 E-value=1.5e-27 Score=225.55 Aligned_cols=347 Identities=19% Similarity=0.178 Sum_probs=223.7
Q ss_pred cCeeEe-cCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HH
Q 013217 21 KSLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 98 (447)
Q Consensus 21 ~~i~l~-~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a 98 (447)
+.+.|. .+..+++++|+++|..++.+. .|+|..++ .+.+..+.+| .+|+.+++++|+++.+++ +|+|+ ++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~--~~nPh~~~-y~w~~~~~~E-~aR~~VAklInAd~~dIi----Fts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEY--LGNPHSRS-YGWKAEDAVE-AAREQVAKLINADPSDIV----FTSGATES 114 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHh--hcCCCccc-cchhhhHHHH-HHHHHHHHHhCCCCCcEE----EeCCchHH
Confidence 345443 556688999999999999874 48888873 3455556677 689999999999987542 36665 89
Q ss_pred HHHHHHHh-cCCCC----EEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 013217 99 NFEVYTAI-LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 99 ~~~~~~al-~~pgd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~kli 173 (447)
|..++.++ +.++| +|+++..+|+++...+- . +...++++..++++ +++.+|.+.+++.+++ +|++|
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~-----~--l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCR-----A--LQEEGLEVTYLPVE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHHH-----H--HHhcCeEEEEeccC-ccccccHHHHHHhcCC-CceEE
Confidence 98898887 66788 99999999988753221 1 12223566777777 7789999999999998 99999
Q ss_pred EEcC-CCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcc
Q 013217 174 IAGA-SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 250 (447)
Q Consensus 174 i~~~-~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~ 250 (447)
.+.. ++-++ .+|+++|+++|++.|+.+++|+||+.|.+..++.... +|++++|+|||+ ||+| |++++++...
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln---~D~~s~s~HK~y-gp~~iGaLYvr~~~~- 260 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELN---ADFLSISAHKIY-GPPGIGALYVRRKRP- 260 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcC---chheeeeccccc-CCCcceEEEEccCCC-
Confidence 8873 34455 8899999999999999999999999999877765554 899999999986 6776 9999996210
Q ss_pred hhhHHHHhhhccCCC------CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEeeeCCCCC
Q 013217 251 GVELESAINNAVFPG------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDN 322 (447)
Q Consensus 251 ~~~~~~~i~~~~~~~------~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~ 322 (447)
.+ ++......| ..|+.......++..|.+..... ..-....+.+....+...+.. ..+.+.+.+...
T Consensus 261 --~~--~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~-~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~ 335 (428)
T KOG1549|consen 261 --RL--RVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKE-MAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSR 335 (428)
T ss_pred --cc--cccCcccCCccccccccCCcCchhhhhhHHHHHHHHhh-cchhHHHHHHHHHHHHHHHhhhCchhhccCCcccc
Confidence 11 111111112 24677777777777777665421 111122223344444444433 222222222211
Q ss_pred eeEEecCCCCCCCHHHHHHHHh----hcCeEEccCC-CCC-------CCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 323 HLVLVDLRPMGIDGARVEKILD----MASITLNKNS-VPG-------DKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 323 ~~~~v~~~~~~~~~~~~~~~L~----~~gI~v~~~~-~p~-------~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
....+.+......+.-+...++ ..|..+.... -|. .......++||||...+|+ ++|++++++.
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t----~~di~~~~~~ 411 (428)
T KOG1549|consen 336 YPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTT----EEDIDYLVDA 411 (428)
T ss_pred cccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCc----HHHHHHHHHH
Confidence 1112222111111111111111 1222221111 111 1112346789999999999 9999999999
Q ss_pred HHHHHHHH
Q 013217 391 IHEGVEIT 398 (447)
Q Consensus 391 i~~~l~~~ 398 (447)
|++.++..
T Consensus 412 i~~~v~~~ 419 (428)
T KOG1549|consen 412 IKKLVSLL 419 (428)
T ss_pred HHHHHHhc
Confidence 99888754
No 38
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=3e-26 Score=224.39 Aligned_cols=329 Identities=16% Similarity=0.142 Sum_probs=225.0
Q ss_pred eEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHH
Q 013217 24 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 103 (447)
Q Consensus 24 ~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~ 103 (447)
.|.|+...+++.|++++...... + ...+.+ +.+..++.+++++|+++... ..+.+.+|++++..++
T Consensus 2 ~~~p~p~~~~~~~~~~~~~~~~~-~-----------~~~~~~-~~~~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 2 LLTPGPLSTSATVRDAMLVDWCH-W-----------DSEFND-VTDQVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATI 67 (355)
T ss_pred cCcCCCCCCCHHHHHHhhhhccC-C-----------CHHHHH-HHHHHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHH
Confidence 35788888999999999763221 1 112223 33356789999999986432 1233578889999999
Q ss_pred HHhcCCCCEEEEecCCCCcc-cCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-CCcEEEEcCCCCC
Q 013217 104 TAILKPHDRIMGLDLPHGGH-LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYP 181 (447)
Q Consensus 104 ~al~~pgd~Vl~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-~~klii~~~~~~~ 181 (447)
.+++++||++++.++.+.+. +. ..+...|. +++.++.+ +++.+|++++++.++++ ++++|++..++++
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~~~-------~~a~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 137 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGERLA-------KICEYLGI--PHTDLNFS-EYEPPDLNRIEEALAADPDITHVATVHHETT 137 (355)
T ss_pred HhccCCCCeEEEECCCchhhHHH-------HHHHHcCC--ceEEEecC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCc
Confidence 99999999877765443221 10 01223344 44444454 35679999999998762 3455665544444
Q ss_pred --CCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHh
Q 013217 182 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 258 (447)
Q Consensus 182 --~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i 258 (447)
...|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+|||++|+.| |++++++ +..+.+
T Consensus 138 ~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~~~~ 208 (355)
T TIGR03301 138 TGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEEL---DVDALIASANKCLEGVPGFGFVIARR------DLLEAS 208 (355)
T ss_pred ccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhc---CccEEEecCCcccccCCceeEEEECH------HHHHHh
Confidence 3779999999999999999999998777543221111 489999999999988888 9999988 555544
Q ss_pred hhccC----------------CCCCCCCcHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHHCCcEeeeCC-C
Q 013217 259 NNAVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGG-S 320 (447)
Q Consensus 259 ~~~~~----------------~~~~g~p~~~~~aal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~ 320 (447)
..... .....+++...+.++..+++.+...+ +++..+++.++++++.+.|.+.|++++.+. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~ 288 (355)
T TIGR03301 209 AGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERW 288 (355)
T ss_pred hCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCC
Confidence 31100 01234667777788888888776555 778888999999999999998898865432 1
Q ss_pred CCe-eEEecCCC-CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 321 DNH-LVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 321 ~~~-~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
.+. ++++.+.. ...+..++.+.|.++||.+..+. .. ..++||++++.+++ ++|++++++.|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~----~~--~~~~iRis~~~~~~----~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 289 QSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGK----LT--LADTFRIGTIGEID----AADIERLLEAIKDAL 355 (355)
T ss_pred CCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCc----cc--cccEEEEecCCCCC----HHHHHHHHHHHHhhC
Confidence 233 33455432 12455788999999999996532 11 12589999887777 999999999998653
No 39
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=2.7e-26 Score=226.73 Aligned_cols=333 Identities=13% Similarity=0.085 Sum_probs=216.2
Q ss_pred CeeEe--cCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHH
Q 013217 22 SLELI--ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 98 (447)
Q Consensus 22 ~i~l~--~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a 98 (447)
.|+|. .--.++++++++++..+... | +.|.. .+..+......+ +.+++.+++++|+++ +.+ +++|+++
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~l~~~lA~~~g~~~----~~~-~~g~t~a 90 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYGDG-Y--SVCDYCPGRLDQIKKPPI-ADFHEDLAEFLGMDE----ARV-THGAREG 90 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHHhc-c--CCCcccccccccccChHH-HHHHHHHHHHhCCCc----EEE-eCCHHHH
Confidence 35553 34457899999999988742 2 33322 111111111122 234578999999975 222 3566699
Q ss_pred HHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccC-CCCCCCCHHHHHHHhhhh------CCc
Q 013217 99 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF------RPK 171 (447)
Q Consensus 99 ~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~id~~~l~~~~~~~------~~k 171 (447)
+.+++.+++++||+|++..+.|.+.+. .+...|. +++.++.+ .+++.+|++++++.+++. +++
T Consensus 91 ~~~al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 160 (387)
T PRK09331 91 KFAVMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGL--NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPA 160 (387)
T ss_pred HHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCC--EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCE
Confidence 999999999999999998877665431 2334554 44454452 145789999999998753 689
Q ss_pred EEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCC
Q 013217 172 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP 248 (447)
Q Consensus 172 lii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~ 248 (447)
+|+++++++++ ..|+++|.++|+++|+++++|++|+.|.++.+.... ++|++++|+|||+++|.+ |++++++
T Consensus 161 lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~---g~D~~~~s~~K~l~~~~~~G~l~~~~-- 235 (387)
T PRK09331 161 LALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL---GADFIVGSGHKSMAASAPSGVLATTE-- 235 (387)
T ss_pred EEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECH--
Confidence 99988666543 789999999999999999999999887654332221 489999999999987765 9999987
Q ss_pred cchhhHHHHhhhccCCC-------CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC-
Q 013217 249 VLGVELESAINNAVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG- 319 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~-------~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~- 319 (447)
++.+.+.....+. ..++......+++.++++.+.. ..+..++..++++++++.|.+. |++++...
T Consensus 236 ----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~ 309 (387)
T PRK09331 236 ----EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVE--RVKRWDEEVKKARWFVDELEKIEGFKQLGEKP 309 (387)
T ss_pred ----HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCEEEeccCc
Confidence 5665553321110 1122222233334445554432 2234566778899999999997 99988421
Q ss_pred CCCeeEEecCC-------CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLR-------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 320 ~~~~~~~v~~~-------~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
..+.+..++.. ....++.++.+.|.++||..-. ++ ....+|+++.. .+++|+++++++|+
T Consensus 310 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~~-----~~~i~ri~~~g-----~t~~di~~l~~aL~ 376 (387)
T PRK09331 310 RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK---PG-----ATKEFKLSTYG-----LTWEQVEYVADAFK 376 (387)
T ss_pred CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc---cC-----CceEEEEEecc-----CCHHHHHHHHHHHH
Confidence 22333334432 1122446788999999997421 11 12346776533 34999999999999
Q ss_pred HHHHH
Q 013217 393 EGVEI 397 (447)
Q Consensus 393 ~~l~~ 397 (447)
++++.
T Consensus 377 ~i~~~ 381 (387)
T PRK09331 377 EIAEK 381 (387)
T ss_pred HHHHh
Confidence 88664
No 40
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=4.5e-26 Score=226.99 Aligned_cols=328 Identities=18% Similarity=0.249 Sum_probs=229.1
Q ss_pred ecCCCCC----CHHHHHHHhhhhhccCCCCCC-CCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHH
Q 013217 26 IASENFT----SRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 100 (447)
Q Consensus 26 ~~~~n~~----~~~v~~a~~~~~~~~~~~g~~-~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~ 100 (447)
..|.+|+ .|.+++++.+.+.. |..+.. ++.+..+.+...++| +++++++|.+. + +.++||++||.
T Consensus 59 ~~~~~YL~l~~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~----~-~~~~sG~~An~ 128 (407)
T PRK07179 59 LQSNDYLNLSGHPDIIKAQIAALQE-EGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES----C-LLCQSGWAANV 128 (407)
T ss_pred eecCCccCCCCCHHHHHHHHHHHHH-hCCCCCccccccCCchHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHH
Confidence 4566676 58999999888764 322211 234555555666776 57899999875 2 44688999999
Q ss_pred HHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCC
Q 013217 101 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 180 (447)
Q Consensus 101 ~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~ 180 (447)
.++.++..+||.|++..+.|.+... .+...|. ++++++ ..|++++++++++.++++|++.++++
T Consensus 129 ~~l~~l~~~g~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n 192 (407)
T PRK07179 129 GLLQTIADPNTPVYIDFFAHMSLWE--------GVRAAGA--QAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYS 192 (407)
T ss_pred HHHHHhCCCCCEEEEECCcCHHHHH--------HHHHCCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCC
Confidence 9999999999999988776655421 1223332 334432 36999999999764578888876665
Q ss_pred CC--CCChHHHHHHHHHhCCEEEEehhhhccccccc---cC-CCCC-CcccEEEeCCCcccCCCCCceEEeecCCcchhh
Q 013217 181 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE 253 (447)
Q Consensus 181 ~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~---~~-~~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~ 253 (447)
++ ..|+++|.++|+++|+++++|++|+.|..... .. ..++ +.+|++++|+||+++ +++|++++++ +
T Consensus 193 ~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~------~ 265 (407)
T PRK07179 193 TTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR------E 265 (407)
T ss_pred CCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH------H
Confidence 54 78999999999999999999999986643211 11 1111 146999999999985 5789999887 6
Q ss_pred HHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC
Q 013217 254 LESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM 332 (447)
Q Consensus 254 ~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~ 332 (447)
+.+.+.....+.. .+++....++++.++++.+.. ..+..+++.++++++.+.|.+.|+++.+ ..+++++.+..
T Consensus 266 ~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~---~~~i~~l~~~~- 339 (407)
T PRK07179 266 LAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELGYNIRS---ESQIIALETGS- 339 (407)
T ss_pred HHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCC---CCCEEEEEeCC-
Confidence 6666654333332 455566777777777776543 2456788999999999999988887663 23455555432
Q ss_pred CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 333 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 333 ~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..+...+.+.|.++||.++..+.|.. +...+.+||+++..+| ++|+++++++|.+++...
T Consensus 340 ~~~~~~~~~~L~~~GI~~~~~~~p~~--~~~~~~lRis~~~~~t----~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 340 ERNTEVLRDALEERNVFGAVFCAPAT--PKNRNLIRLSLNADLT----ASDLDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHHHHHHHHHCCceEeeecCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHhh
Confidence 12346678889999998653323322 2234689999998887 999999999999887753
No 41
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.96 E-value=1.1e-26 Score=227.31 Aligned_cols=300 Identities=18% Similarity=0.226 Sum_probs=214.1
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccC-chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc-HHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVY 103 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~-g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~ 103 (447)
.++..++|+.|++++..++.+.+ ++|+.+.+. +....+.+ +.+++++++++|+++++ |..++| ++++..++
T Consensus 4 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~r~~la~~~g~~~~~----v~~~~g~t~a~~~~l 76 (353)
T TIGR03235 4 HNATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAV-ERARKQVAEALGADTEE----VIFTSGATESNNLAI 76 (353)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHH-HHHHHHHHHHhCCCCCe----EEEeCCHHHHHHHHH
Confidence 35667889999999998886543 556653221 22233334 45778999999998764 334566 48888888
Q ss_pred HHhc----CCC-CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 104 TAIL----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 104 ~al~----~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
.++. ++| |+|++...+|+++..... .+...|. +++.++++ +++.+|++++++.+++ ++++|+++++
T Consensus 77 ~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~ 147 (353)
T TIGR03235 77 LGLARAGEQKGKKHIITSAIEHPAVLEPIR-----ALERNGF--TVTYLPVD-ESGRIDVDELADAIRP-DTLLVSIMHV 147 (353)
T ss_pred HHHHHhcccCCCCeeeEcccccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhCCC-CCEEEEEEcc
Confidence 8775 366 789888888876543221 1122343 55555565 4578999999999976 8999988866
Q ss_pred CCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHH
Q 013217 179 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 255 (447)
Q Consensus 179 ~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~ 255 (447)
++++ ..|+++|.++|+++|+++++|++|+.|.+..++... ++|++++|+||| .||.| |+++++++ ..
T Consensus 148 ~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~-~gp~g~g~l~~~~~------~~ 217 (353)
T TIGR03235 148 NNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD---RIDLISCSGHKI-YGPKGIGALVIRKR------GK 217 (353)
T ss_pred cCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc---CCCEEEeehhhc-CCCCceEEEEEccC------cc
Confidence 6654 789999999999999999999999998876554332 489999999998 58988 99999874 21
Q ss_pred H--HhhhccC------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEe
Q 013217 256 S--AINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 327 (447)
Q Consensus 256 ~--~i~~~~~------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v 327 (447)
. .+....+ ....|+++...++++..+++.+. .+.++..+++.++++.+.+.|.+.|++++.+.......++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~ 296 (353)
T TIGR03235 218 PKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHIL 296 (353)
T ss_pred cccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEE
Confidence 1 1221111 11257888999999999999865 4677888999999999999998899988754222222234
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccC
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKN 353 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~ 353 (447)
.+...+.+++++.+.|.+ +|.++.+
T Consensus 297 ~~~~~~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 297 NFSIDGVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred EEEeCCcCHHHHHHHHhC-CeEEEch
Confidence 444446778899999975 8988764
No 42
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=2.7e-26 Score=228.39 Aligned_cols=341 Identities=16% Similarity=0.177 Sum_probs=224.6
Q ss_pred ecCCCCCCHHHHHHHhhhhh--ccCCCCCCCCccc-CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLT--NKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 102 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~--~~~~~g~~~~~~~-~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~ 102 (447)
.++..++|+.|++++..++. +.+ +.++.+.. .+....+.++ .+++++++++|++++++ +.+++|++++..+
T Consensus 9 ~a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~v---~~~~g~t~al~~~ 82 (404)
T PRK14012 9 YSATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVD-IARNQIADLIGADPREI---VFTSGATESDNLA 82 (404)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCeE---EEeCCHHHHHHHH
Confidence 46667889999999988876 443 33433111 1111112233 45678999999987643 2335566888877
Q ss_pred HHHh----cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 103 YTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 103 ~~al----~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
+.++ .++||+|++.+++|++....+. .+...|. +++.++.+ +++.+|+++|++++++ ++++|+++..
T Consensus 83 l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-----~~~~~g~--~~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 153 (404)
T PRK14012 83 IKGAAHFYQKKGKHIITSKTEHKAVLDTCR-----QLEREGF--EVTYLDPQ-SNGIIDLEKLEAAMRD-DTILVSIMHV 153 (404)
T ss_pred HHHHHHhhcCCCCEEEEecCccHHHHHHHH-----HHHhCCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECc
Confidence 7766 4799999999988876543221 1112343 45555565 4678999999999987 8999988865
Q ss_pred CCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHH
Q 013217 179 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 255 (447)
Q Consensus 179 ~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~ 255 (447)
++++ ..|+++|.++|+++|+++++|++|+.|..+.+.... ++|++++|+||. .||.| |+++++++ ..
T Consensus 154 ~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~-~gp~g~G~l~~~~~------~~ 223 (404)
T PRK14012 154 NNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKL---KVDLMSFSAHKI-YGPKGIGALYVRRK------PR 223 (404)
T ss_pred CCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccC---CCCEEEEehhhc-cCCCceEEEEEecC------CC
Confidence 5543 779999999999999999999999888764433222 489999999995 57877 88888874 11
Q ss_pred HHhhhccCC------CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCC--CCeeEE
Q 013217 256 SAINNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNHLVL 326 (447)
Q Consensus 256 ~~i~~~~~~------~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~--~~~~~~ 326 (447)
.++.+.... ...|+++...+.++..|++.+. .+.++..++..+.++++.+.|++ .++.+..... ..+..+
T Consensus 224 ~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~ 302 (404)
T PRK14012 224 VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLN 302 (404)
T ss_pred CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEE
Confidence 122211110 1246778888888888887765 35666778888888888888877 4566543211 122222
Q ss_pred ecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC------------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMASITLNKNSVPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~------------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+.+.. .+..++...|++.+|.....+.|... .....+.||++++.++| ++|++++++.|+++
T Consensus 303 ~~~~~--~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t----~~dvd~~~~~l~~~ 376 (404)
T PRK14012 303 VSFNY--VEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTT----EEEIDYAIELVRKS 376 (404)
T ss_pred EEEeC--cCHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCC----HHHHHHHHHHHHHH
Confidence 32221 13456666675444433322333221 01124679999999888 99999999999998
Q ss_pred HHHH
Q 013217 395 VEIT 398 (447)
Q Consensus 395 l~~~ 398 (447)
++..
T Consensus 377 ~~~~ 380 (404)
T PRK14012 377 IGKL 380 (404)
T ss_pred HHHH
Confidence 8765
No 43
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=3.2e-26 Score=218.09 Aligned_cols=326 Identities=18% Similarity=0.175 Sum_probs=230.0
Q ss_pred CCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cC
Q 013217 30 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 108 (447)
Q Consensus 30 n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~ 108 (447)
..+....++++...+.+.|. ...+.+.++| +.+++++|+++ .+.++|||.|+..++.++ ++
T Consensus 11 p~i~~~e~~~v~~vl~sg~i---------~~G~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al~ig 72 (374)
T COG0399 11 PSIGEEELAAVQEVLKSGWL---------TGGPFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLALAIG 72 (374)
T ss_pred CCcchHHHHHHHHHHHcCCe---------ecChHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhcCCC
Confidence 34567788888888887652 2245678888 58999999997 355699999999999977 79
Q ss_pred CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHH
Q 013217 109 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR 188 (447)
Q Consensus 109 pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~ 188 (447)
|||+|++++.++.+.. +.+...|. +++.+++|++++.+|++.||+++++ +||+|+.. +-++...|+++
T Consensus 73 ~GDeVI~ps~TfvATa--------n~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~~ 140 (374)
T COG0399 73 PGDEVIVPSFTFVATA--------NAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMDA 140 (374)
T ss_pred CCCEEEecCCchHHHH--------HHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHHH
Confidence 9999999998765543 24445564 8888889999999999999999998 89998876 35566789999
Q ss_pred HHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCC--cccCCCCCceEEeecCCcchhhHHHHhhhccCCCC
Q 013217 189 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL 266 (447)
Q Consensus 189 i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~--K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~ 266 (447)
|.++|++||++||.|+||+.|..+.|...-.+ .|+.++|+| |.|....||+++++++ ++.++++.....|.
T Consensus 141 i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~--Gd~~~fSF~~~K~ittgEGGav~tnd~-----ela~k~~~lr~hG~ 213 (374)
T COG0399 141 IMALAKRHGLPVIEDAAQAHGATYKGKKVGSF--GDIGAFSFHATKNLTTGEGGAVVTNDE-----ELAEKARSLRNHGL 213 (374)
T ss_pred HHHHHHHcCCeEEEEcchhccCeecCcccccc--cceEEEEecCCCCccccCceEEEeCCH-----HHHHHHHHHHHhCc
Confidence 99999999999999999999998877543332 466666665 9997669999999996 78887765443333
Q ss_pred CCC---------C-cHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCC----CCeeEEecCCC
Q 013217 267 QGG---------P-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS----DNHLVLVDLRP 331 (447)
Q Consensus 267 ~g~---------p-~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~~v~~~~ 331 (447)
... + .+..+.-+.+|+...+-+..++..++..++++.+.+.|++. ++.+..... ..|+..+-+.+
T Consensus 214 ~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~ 293 (374)
T COG0399 214 SRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE 293 (374)
T ss_pred CCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC
Confidence 110 0 01112233334443333446777888889999999999874 344333211 23444444444
Q ss_pred CCCCHHHHHHHHhhcCeEEccCCCCCCCCC------------------CCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 332 MGIDGARVEKILDMASITLNKNSVPGDKSA------------------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 332 ~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~------------------~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+.+.+.+...|++.||.....+.|.+..+ .....+++.++. +|+++|+++++++|.+
T Consensus 294 ~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p----~l~~~~~~~V~~~l~~ 369 (374)
T COG0399 294 EGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHP----NLSEEDVDRVIEALKE 369 (374)
T ss_pred CCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCC----CCCHHHHHHHHHHHHH
Confidence 356788999999999887444344432210 011234443322 5679999999999998
Q ss_pred HHH
Q 013217 394 GVE 396 (447)
Q Consensus 394 ~l~ 396 (447)
++.
T Consensus 370 ~~~ 372 (374)
T COG0399 370 VLG 372 (374)
T ss_pred Hhc
Confidence 875
No 44
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=6.4e-26 Score=222.85 Aligned_cols=331 Identities=16% Similarity=0.124 Sum_probs=214.1
Q ss_pred hcCeeEec--CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchh---HHHHHHHHHHHHHHHHcCCCCCccceeeecCC
Q 013217 20 FKSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE---YIDELETLCQKRALAAFNLDENKWGVNVQPLS 94 (447)
Q Consensus 20 ~~~i~l~~--~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~---~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~s 94 (447)
+.+|+|.| ....+..++.+++.++ ..|+.++|+-+|.. +...+. ..++.+++++|++.. .+ +++
T Consensus 6 ~~~~~~~~~~~~g~~~~~~~~a~~~~-----~~~~~~~~~~~g~~~~~~~~~~~-~~~e~lA~~~g~~~~----~i-~~g 74 (370)
T TIGR02539 6 RGSINLNPLQRGGVLTEAARKALVEF-----GDGYSVCDFCGGRLDQITKPPIH-DFLEDLAEFLGMDEA----RV-THG 74 (370)
T ss_pred ccccccChhhhCCCCcHHHHHHHHHH-----hhccccccccccccccccchHHH-HHHHHHHHHhCCCce----EE-ECC
Confidence 34566644 3446678888887654 34555555433321 011222 223569999999862 33 366
Q ss_pred cHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhh------
Q 013217 95 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL------ 167 (447)
Q Consensus 95 Gs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~------ 167 (447)
|++++..++.++++|||+|++..+.|.+.+. .+...|. +++.++.+. .++.+|++++++++++
T Consensus 75 ~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 144 (370)
T TIGR02539 75 AREGKFAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGL--NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESG 144 (370)
T ss_pred hHHHHHHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCC--EEEEEecCCcccCCcCHHHHHHHHHHhhhccC
Confidence 6699999999999999999998887765431 2344555 444444542 3578999999999863
Q ss_pred hCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCC-CCceEEe
Q 013217 168 FRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP-RGGMIFF 244 (447)
Q Consensus 168 ~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp-~gG~i~~ 244 (447)
.++++|++++++++. ..|+++|.++|+++|+++++|++|+.|.+....... +.|++++|+||+++++ +.|++++
T Consensus 145 ~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~---~~di~v~s~sK~~~~~g~~G~l~~ 221 (370)
T TIGR02539 145 KPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEI---GADFIVGSGHKSMAASGPCGVLGM 221 (370)
T ss_pred CCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEE
Confidence 267898888666553 789999999999999999999999877432221111 4799999999998643 3499999
Q ss_pred ecCCcchhhHHHHhhhccCCCC-------CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeee
Q 013217 245 KKDPVLGVELESAINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 317 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~-------~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 317 (447)
++ ++.+.+.....|.. .++......++...++.... .+-+...+..++++++++.|++.|++++.
T Consensus 222 ~~------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~l~~~~~~~~~~~~l~~~L~~~g~~~~~ 293 (370)
T TIGR02539 222 SE------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV--ERVKRWDEEVKKTRWFVAELEDIGFIQLG 293 (370)
T ss_pred CH------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCcEEEc
Confidence 87 67776655433211 12222223333344554322 12222344556677899999999998753
Q ss_pred -CCCCCeeEEecCCCC-------CCCHHHHHHHHhhcCeE-EccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHH
Q 013217 318 -GGSDNHLVLVDLRPM-------GIDGARVEKILDMASIT-LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 388 (447)
Q Consensus 318 -~~~~~~~~~v~~~~~-------~~~~~~~~~~L~~~gI~-v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~ 388 (447)
.++.+++++++++.. ..+...+.+.|.++||. ++ |+ .++.||++.. ..+ ++|+++++
T Consensus 294 ~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir----~~-----~~~~iRis~~-~~t----~e~i~~l~ 359 (370)
T TIGR02539 294 QKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR----SG-----QTKYFKLSVY-GLT----KEQVEYVV 359 (370)
T ss_pred cCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc----CC-----cceEEEEEec-CCC----HHHHHHHH
Confidence 224566666665321 11235688899999996 43 21 1348999963 234 99999999
Q ss_pred HHHHHHHH
Q 013217 389 DFIHEGVE 396 (447)
Q Consensus 389 ~~i~~~l~ 396 (447)
++|+++++
T Consensus 360 ~~L~~~~~ 367 (370)
T TIGR02539 360 DSFEEIVE 367 (370)
T ss_pred HHHHHHHH
Confidence 99988765
No 45
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=5.2e-26 Score=222.24 Aligned_cols=319 Identities=20% Similarity=0.189 Sum_probs=218.7
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 111 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd 111 (447)
+|+|++++.+.+.+ |..++.+.+++.| ++....++ +.+++++|++. .+.+++|++++.+++.++++|||
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTSDLHEELE----EELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGD 86 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCchHHHHHH----HHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCC
Confidence 68999999998874 4444333333323 34344444 68889999864 34468899999988899999999
Q ss_pred EEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh----hCCcEEEEcCCCCCC--CCC
Q 013217 112 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--DFD 185 (447)
Q Consensus 112 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~----~~~klii~~~~~~~~--~~~ 185 (447)
+|++.++.|++... .+...|. +++.++ .+|++++++++++ .++++|+++++++++ ..|
T Consensus 87 ~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 87 LIISDSLNHASIID--------GIRLSGA--KKRIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred EEEEehhhhHHHHH--------HHHHcCC--ceEEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 99999888766432 1223443 333332 3588899998875 256778777655543 779
Q ss_pred hHHHHHHHHHhCCEEEEehhhhcccccccc-----CCCCCCcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhh
Q 013217 186 YPRMRQIADAVGALLMMDMAHISGLVAASV-----VADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 260 (447)
Q Consensus 186 ~~~i~~ia~~~g~~livD~a~~~g~~~~~~-----~~~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~ 260 (447)
+++|.++|+++|+++++|++|..|...... ......+.|++++|+||+++ ++||+++.++ ++.+.+..
T Consensus 151 ~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~------~~~~~~~~ 223 (349)
T cd06454 151 LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK------ELIDYLRS 223 (349)
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH------HHHHHHHH
Confidence 999999999999999999999777553211 01111257999999999885 4789888876 66666654
Q ss_pred ccCCC-CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHH
Q 013217 261 AVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARV 339 (447)
Q Consensus 261 ~~~~~-~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~ 339 (447)
...+. ..++++...++++..+++.... ++...+++.++++.+.+.|.+.|+.++.++ ...+.++.+ +...+..++
T Consensus 224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~~~-~~~~~~~~~ 299 (349)
T cd06454 224 YARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSP-SHIIPPLIG-DDPAKAVAF 299 (349)
T ss_pred hchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCcEEEEeC-CChHHHHHH
Confidence 43322 2245566667777778877654 456788899999999999998888766532 233333322 223356788
Q ss_pred HHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 340 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 340 ~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
.+.|.+.||.+.....+. .....+.+|++++.+++ ++|+++++++|+++
T Consensus 300 ~~~L~~~gI~~~~~~~~~--~~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~ 348 (349)
T cd06454 300 SDALLERGIYVQAIRYPT--VPRGTARLRISLSAAHT----KEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHhCCceEEEecCCc--cCCCCCeEEEEEeCCCC----HHHHHHHHHHHHHh
Confidence 888888899986532111 11124689999987777 99999999998753
No 46
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=2e-25 Score=219.94 Aligned_cols=346 Identities=18% Similarity=0.149 Sum_probs=231.2
Q ss_pred CHHHHHHHHHHHHHhh--cCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC
Q 013217 5 NPEVCEIITKEKERQF--KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 82 (447)
Q Consensus 5 ~~~~~~~~~~e~~~~~--~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~ 82 (447)
+.|+.+.+.+-.++.. ..+ |-...++..|.+.+++...+... .+.+.. +.+ ...+++.+++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~--~~~---~~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETN--LGDPGL--FPG---TAKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcC--CCCccc--Ccc---HHHHHHHHHHHHHHHhCCC
Confidence 4566666654333321 113 44445667788889988777542 233322 222 2344456778999999987
Q ss_pred CCccceeeecCCcHHHHHHHHHHhcC----CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCH
Q 013217 83 ENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 158 (447)
Q Consensus 83 ~~~~~~~v~~~sGs~a~~~~~~al~~----pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~ 158 (447)
.... +..++|+++|..++.++.+ +||+|++.++.|.++. +.+...|..+. .++.+ +++.+|+
T Consensus 76 ~~~~---~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~--------~~~~~~g~~~~--~v~~~-~~~~~d~ 141 (371)
T PRK13520 76 DAYG---YITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD--------KAADMLGVELR--RAPLD-DDYRVDV 141 (371)
T ss_pred CCCe---EEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH--------HHHHHcCceEE--EecCC-CCCcCCH
Confidence 6422 3345677999888776643 6899999887765532 12234454334 44454 4578999
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCC-C-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCC--C--CCcccEEEeCCCc
Q 013217 159 DMLEKTAILFRPKLIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P--FKYCDVVTTTTHK 232 (447)
Q Consensus 159 ~~l~~~~~~~~~klii~~~~~~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~--~~~~Di~~~s~~K 232 (447)
++|++++++ ++++|++..++++ + ..|+++|.++|+++|+++++|++|+.+.++...... . ..++|++++|+||
T Consensus 142 ~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K 220 (371)
T PRK13520 142 KAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK 220 (371)
T ss_pred HHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcc
Confidence 999999987 7776665533332 3 789999999999999999999999765432211111 1 1258999999999
Q ss_pred ccCCCC-CceEEeecCCcchhhHHHHhhhccCCC--------CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHH
Q 013217 233 SLRGPR-GGMIFFKKDPVLGVELESAINNAVFPG--------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 303 (447)
Q Consensus 233 ~l~Gp~-gG~i~~~~~~~~~~~~~~~i~~~~~~~--------~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~ 303 (447)
|+.+|. +|+++++++ ++.+.+... .+. ..|+++...++++..+++.+...+++++.++..+++++
T Consensus 221 ~~~a~~~~G~~~~~~~-----~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~ 294 (371)
T PRK13520 221 MGLAPIPAGGILFRDE-----SYLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRW 294 (371)
T ss_pred ccCccCCceEEEEcCH-----HHHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHH
Confidence 976543 466666553 455554321 111 12445555677777888877667788889999999999
Q ss_pred HHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHH
Q 013217 304 LASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKE 383 (447)
Q Consensus 304 l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~d 383 (447)
+.+.|++.|++++.. ...+++.+++. +.+++.+.|.++||.++.+. .++.+|++++.+++ ++|
T Consensus 295 l~~~L~~~g~~~~~~-~~~~~v~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~~t----~ed 357 (371)
T PRK13520 295 LAEELKERGFEPVIE-PVLNIVAFDDP----NPDEVREKLRERGWRVSVTR--------CPEALRIVCMPHVT----REH 357 (371)
T ss_pred HHHHHHhCCCEEecC-CCceEEEEecC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECCCC----HHH
Confidence 999999889884433 23445555543 46788999988999986431 13579999888777 999
Q ss_pred HHHHHHHHHHHHH
Q 013217 384 FVAIADFIHEGVE 396 (447)
Q Consensus 384 i~~l~~~i~~~l~ 396 (447)
++++++.|++++.
T Consensus 358 i~~~~~~l~~~~~ 370 (371)
T PRK13520 358 IENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987654
No 47
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=1.4e-25 Score=215.36 Aligned_cols=327 Identities=22% Similarity=0.248 Sum_probs=237.5
Q ss_pred eeEecCCCCC----CHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHH
Q 013217 23 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 97 (447)
Q Consensus 23 i~l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~ 97 (447)
++ ..|.||. .|.+++++...+. +|..|.++.|...| .+...++| +++++++|.+. .+..+||..
T Consensus 42 ~n-f~SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SGy~ 110 (388)
T COG0156 42 LN-FCSNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSGFV 110 (388)
T ss_pred Ee-eeccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcccch
Confidence 44 4688886 6889999887765 46678888885444 45667788 68999999986 245699999
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--C---CcE
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKL 172 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~---~kl 172 (447)
||..++.++++++|.|+.....|.+.+. .+++++. +.+.+.. .|+++|++++++. . .++
T Consensus 111 AN~~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a--~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~ 174 (388)
T COG0156 111 ANLGLLSALLKKGDLIFSDELNHASIID--------GIRLSRA--EVRRFKH------NDLDHLEALLEEARENGARRKL 174 (388)
T ss_pred hHHHHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCC--cEEEecC------CCHHHHHHHHHhhhccCCCceE
Confidence 9999999999999999999988876542 3455554 4444433 6889999999762 2 355
Q ss_pred EEEc--CCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccc---cC-CCCCC--cccEEEeCCCcccCCCCCceEEe
Q 013217 173 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-ADPFK--YCDVVTTTTHKSLRGPRGGMIFF 244 (447)
Q Consensus 173 ii~~--~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~---~~-~~~~~--~~Di~~~s~~K~l~Gp~gG~i~~ 244 (447)
|++. .|..+...|+++|.++|++||+++++|+||+.|.+... .. .-.+. ..||+++|++|.|+ -.||++.+
T Consensus 175 IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~g 253 (388)
T COG0156 175 IVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIAG 253 (388)
T ss_pred EEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceeeC
Confidence 5554 34444578999999999999999999999999987642 11 11111 35899999999985 67899999
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCC-CcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCe
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 323 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~-p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 323 (447)
+. .+.+.+.....+...++ ..+...++...+++.+. ...++++++.++...+++.+...|+.+.. +.++
T Consensus 254 ~~------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~~~~~--s~s~ 323 (388)
T COG0156 254 SA------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGLVLLP--SESP 323 (388)
T ss_pred cH------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCccCC--CCCC
Confidence 88 77777766545555444 34444556666787765 34567888999999999777777876633 4466
Q ss_pred eEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 324 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+..+-+.+.. ...++...|.+.||.+.....|- .|...++||++.++.+| ++||+++++++.++
T Consensus 324 I~pv~~gd~~-~a~~~s~~l~~~Gi~v~~i~~PT--Vp~gtarlRi~lta~ht----~~~I~~l~~~l~~~ 387 (388)
T COG0156 324 IIPVILGDEE-RALEASRALLEEGIYVSAIRPPT--VPKGTARLRITLTAAHT----EEDIDRLAEALSEV 387 (388)
T ss_pred eeeeEeCCHH-HHHHHHHHHHHCCeeEeeecCCC--CCCCcceEEEEecCCCC----HHHHHHHHHHHHhh
Confidence 6655554322 34567777777799997654332 24456799999998888 99999999998764
No 48
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.95 E-value=2.6e-25 Score=219.16 Aligned_cols=311 Identities=19% Similarity=0.261 Sum_probs=216.6
Q ss_pred cCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccc
Q 013217 58 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 137 (447)
Q Consensus 58 ~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 137 (447)
|++.....++| +.+++++|.+. .+.+++|++|+..++.++++|||+|+ +++.+..+. ..+..
T Consensus 49 Y~~~~g~~~Le----eaia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~~~--------~~i~~ 110 (431)
T cd00617 49 YAGSKSFYDLE----DAVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTVP-SNMHFDTTR--------GHIEA 110 (431)
T ss_pred cCCCCCHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccchH--------HHHHh
Confidence 34444456777 46788889874 35568888999999999999999874 444333221 13345
Q ss_pred ccceeEEEecccCC---------CCCCCCHHHHHHHhhhh---CCcEEEEcCCCCC--C-CC---ChHHHHHHHHHhCCE
Q 013217 138 TSIYFESMPYRLDE---------STGLVDYDMLEKTAILF---RPKLIIAGASAYP--R-DF---DYPRMRQIADAVGAL 199 (447)
Q Consensus 138 ~g~~~~~~~~~~~~---------~~~~id~~~l~~~~~~~---~~klii~~~~~~~--~-~~---~~~~i~~ia~~~g~~ 199 (447)
.|. +++.+++++ .++.+|+++|++++++. ++++|+++.|+|+ + .. ++++|.++|++||++
T Consensus 111 ~Ga--~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~ 188 (431)
T cd00617 111 NGA--VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIP 188 (431)
T ss_pred CCC--EeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 554 455555542 24569999999999862 3788888877775 2 44 456889999999999
Q ss_pred EEEehhhhccccc------cccCCCCC--------CcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhcc--C
Q 013217 200 LMMDMAHISGLVA------ASVVADPF--------KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV--F 263 (447)
Q Consensus 200 livD~a~~~g~~~------~~~~~~~~--------~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~--~ 263 (447)
|+.|++|..+... .+....++ ..+|.+++|++|.+.++-||+++++++ ++.++++... +
T Consensus 189 li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-----~l~~~~~~~~~~~ 263 (431)
T cd00617 189 VVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-----ELYEEARQRVVLY 263 (431)
T ss_pred EEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-----HHHHHHHHhcccc
Confidence 9999998765221 12222221 258999999999988888999999984 5777776422 2
Q ss_pred CC--CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC-------CC
Q 013217 264 PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GI 334 (447)
Q Consensus 264 ~~--~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-------~~ 334 (447)
.+ ..|+.+...+++++.++++... .++.++..+++++|.+.|.+.|++++.+ ...|.+++|+... ..
T Consensus 264 ~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G~~v~~P-~Ggh~v~~d~~~~~~~~~~~~~ 339 (431)
T cd00617 264 EGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAGVPIVEP-AGGHAVFIDAREFLPHIPQEQF 339 (431)
T ss_pred CCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCCCCccCC-CcceEEEEEhHHhcCCCCcccC
Confidence 22 2466677778888778876433 2446666677899999999999988765 4678999987632 12
Q ss_pred CHHHHH-HHHhhcCeEEcc-CC--CCCCCCC---C--CCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 335 DGARVE-KILDMASITLNK-NS--VPGDKSA---L--VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 335 ~~~~~~-~~L~~~gI~v~~-~~--~p~~~~~---~--~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
++..+. .++++.||.+.. +. .+.++.. . ....+|+++| .|+++.++|++++++|.++.++...
T Consensus 340 ~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p---rr~~t~~~~~~~~~~~~~~~~~~~~ 411 (431)
T cd00617 340 PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP---RRVYTQDHMDYVAAAVIALYERRED 411 (431)
T ss_pred cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc---ccccCHHHHHHHHHHHHHHHhhHhh
Confidence 355555 566889998643 22 2333311 1 1358999987 6899999999999999999987643
No 49
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.95 E-value=3.3e-25 Score=236.34 Aligned_cols=354 Identities=17% Similarity=0.135 Sum_probs=232.3
Q ss_pred CeeEe-cCCCCCCH-HHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HH
Q 013217 22 SLELI-ASENFTSR-AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 98 (447)
Q Consensus 22 ~i~l~-~~~n~~~~-~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a 98 (447)
.+-|. ++.++.++ .|.+++..++.+. .++|+..+..+....+.++ .+|+++++++|++++++ .|..|+|+ +|
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~--~~np~s~~~~s~~~~~~~e-~aR~~ia~~lga~~~~~--~VvFtsnaT~a 109 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNV--YGNPHSQSDSSMRSSDTIE-SARQQVLEYFNAPPSDY--ACVFTSGATAA 109 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhc--cCCCCcCcchhhhHHHHHH-HHHHHHHHHhCCCccce--EEEEeCChHHH
Confidence 34443 44556565 5555555555543 3556544444444455555 78999999999986542 23346654 88
Q ss_pred HHHHHHHh-cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-----CCCCCCH--HHHHHHhh----
Q 013217 99 NFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-----STGLVDY--DMLEKTAI---- 166 (447)
Q Consensus 99 ~~~~~~al-~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~id~--~~l~~~~~---- 166 (447)
+..+..++ +++||+|++...+|.+.+..+. .....|..++.++.+.+. ..+.+|. +++++.++
T Consensus 110 lnlva~~l~~~~gd~Iv~t~~eH~svl~~~~-----~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 110 LKLVGETFPWSSESHFCYTLENHNSVLGIRE-----YALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred HHHHHHHCCCCCCCeEEEeeccccchHHHHH-----HHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 88888887 7899999998888887653211 112234433443332110 1233443 66766532
Q ss_pred -----hhCCcEEEEc-CCCCCC-CCChHHHHHHHHHh--------CCEEEEehhhhccccccccCCCCCCcccEEEeCCC
Q 013217 167 -----LFRPKLIIAG-ASAYPR-DFDYPRMRQIADAV--------GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH 231 (447)
Q Consensus 167 -----~~~~klii~~-~~~~~~-~~~~~~i~~ia~~~--------g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~ 231 (447)
..++++|.++ .+|..+ ..|++.+..+++.. ++++++|++|++|.++.++... ++|++++|+|
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~S~H 261 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRY---PADFVVVSFY 261 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhc---CCCEEEEecc
Confidence 1256898887 445455 88999776555532 3579999999999887665444 3899999999
Q ss_pred cccCCCCC-ceEEeecCCcchhhHHHHhhhccCC-----------------------CCCCCCcHHHHHHHHHHHHHhcC
Q 013217 232 KSLRGPRG-GMIFFKKDPVLGVELESAINNAVFP-----------------------GLQGGPHNHTIGGLAVCLKHAQS 287 (447)
Q Consensus 232 K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~-----------------------~~~g~p~~~~~aal~~al~~~~~ 287 (447)
||++||.| |++++++ ++.+.+.+..+. ...||++...++++.+|++.+..
T Consensus 262 K~~GgP~G~G~L~vr~------~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ 335 (805)
T PLN02724 262 KIFGYPTGLGALLVRR------DAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNR 335 (805)
T ss_pred eeccCCCCceEEEEeh------hhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHH
Confidence 99988999 9999998 444433322111 12588999999999999999887
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHC-------CcEeeeCCC-----CCeeEEecCCCCC-----CCHHHHHHHHhhcCeEE
Q 013217 288 PEFKVYQNKVVSNCRALASRLVEL-------GYKLVSGGS-----DNHLVLVDLRPMG-----IDGARVEKILDMASITL 350 (447)
Q Consensus 288 ~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~-----~~~~~~v~~~~~~-----~~~~~~~~~L~~~gI~v 350 (447)
.+++...++..+.++++.+.|.+. +++++++.. ..+..++.|.-.+ +...++..++.++||.+
T Consensus 336 ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~v 415 (805)
T PLN02724 336 LTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQL 415 (805)
T ss_pred hChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEE
Confidence 778888888889999999999874 366665320 1122233322222 34556777778899999
Q ss_pred ccCCC--CCCC-C---------------------------CCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 351 NKNSV--PGDK-S---------------------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 351 ~~~~~--p~~~-~---------------------------~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+.++. |+-. . ....+.+|+|++.+|| ++|+++++++|++.....
T Consensus 416 R~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt----~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 416 RTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMST----FEDCQKFIDFIISSFVST 489 (805)
T ss_pred eeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCC----HHHHHHHHHHHHHHhhcC
Confidence 88642 2100 0 1113679999999999 999999999999976543
No 50
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.94 E-value=1.1e-24 Score=214.76 Aligned_cols=317 Identities=18% Similarity=0.154 Sum_probs=211.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
..+.+.+++..++... .|.++ . +.+. ..+++.+++++++++|++++.. +..++|++++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~--~~~~~-~-~~~~---~~~~~~~~~~la~~~g~~~~~~---~~~~g~~~~~~~~~~~~~~~~~ 101 (373)
T TIGR03812 32 PHPIAVKAYDMFIETN--LGDPG-L-FPGT---KKIEEEVVGSLGNLLHLPDAYG---YIVSGGTEANIQAVRAAKNLAR 101 (373)
T ss_pred chHHHHHHHHHHhhcC--CCCcc-c-CccH---HHHHHHHHHHHHHHhCCCCCCe---EEeccHHHHHHHHHHHHHHHHh
Confidence 4455677776665432 34443 1 2332 3455567789999999986432 223555688877766653
Q ss_pred --CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCc-EEEEcCCCCCC-C
Q 013217 108 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIAGASAYPR-D 183 (447)
Q Consensus 108 --~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~k-lii~~~~~~~~-~ 183 (447)
++||+|+++++.|.++. ..+...|. +++.++++ +++.+|++++++++++ ++. ++++.+++..+ .
T Consensus 102 ~~~~g~~vl~~~~~h~~~~--------~~~~~~G~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG~~ 169 (373)
T TIGR03812 102 EEKRTPNIIVPESAHFSFE--------KAAEMLGL--ELRYAPLD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELGQI 169 (373)
T ss_pred ccCCCcEEEECCcchHHHH--------HHHHHcCC--eEEEEeeC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCCcc
Confidence 47899999887765532 12344554 44444455 4678999999999977 664 44444333233 7
Q ss_pred CChHHHHHHHHHhCCEEEEehhhhccccccc---cCCCCC----CcccEEEeCCCcccCCCC-CceEEeecCCcchhhHH
Q 013217 184 FDYPRMRQIADAVGALLMMDMAHISGLVAAS---VVADPF----KYCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELE 255 (447)
Q Consensus 184 ~~~~~i~~ia~~~g~~livD~a~~~g~~~~~---~~~~~~----~~~Di~~~s~~K~l~Gp~-gG~i~~~~~~~~~~~~~ 255 (447)
.|+++|.++|+++|+++++|++|+.+.+... ....++ .++|++++|+|||+.+|. +|++++.++ ++.
T Consensus 170 ~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~-----~~~ 244 (373)
T TIGR03812 170 DDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK-----SYL 244 (373)
T ss_pred CCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH-----HHH
Confidence 7999999999999999999999875543211 111111 268999999999865553 455544332 565
Q ss_pred HHhhhccCCCC--------CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEe
Q 013217 256 SAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 327 (447)
Q Consensus 256 ~~i~~~~~~~~--------~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v 327 (447)
+.+... .+.. .|+++...++++..+++.+...++++..++..+++++|++.|++.|+..+.+ ...+++.+
T Consensus 245 ~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~v~~ 322 (373)
T TIGR03812 245 KYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIE-PVLNIVAF 322 (373)
T ss_pred hhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC-CCceEEEE
Confidence 555321 1211 2566777788888889887777888889999999999999999988765433 23344444
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+. +..++.+.|.++||.++... .+..+|++++..++ ++|++++++.|++
T Consensus 323 ~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~~t----~edid~l~~~L~~ 372 (373)
T TIGR03812 323 EVD----DPEEVRKKLRDRGWYVSVTR--------CPKALRIVVMPHVT----REHIEEFLEDLKE 372 (373)
T ss_pred EeC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECCCC----HHHHHHHHHHHhh
Confidence 432 34678889989999986421 13589999988777 9999999999865
No 51
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=1.3e-24 Score=216.21 Aligned_cols=334 Identities=19% Similarity=0.195 Sum_probs=221.0
Q ss_pred CeeEecCC--CC-CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHH
Q 013217 22 SLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 98 (447)
Q Consensus 22 ~i~l~~~~--n~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a 98 (447)
.|+|..+. .+ .++.+.+++...+.. +..++++.++..|.. .+.+..++++++++|.+. .|.+++|+++
T Consensus 44 ~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~a 114 (397)
T PRK06939 44 VINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFDA 114 (397)
T ss_pred EEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHHH
Confidence 36765443 22 588899988887754 333555444433431 233344478889999763 3556899999
Q ss_pred HHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---h--CCcEE
Q 013217 99 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKLI 173 (447)
Q Consensus 99 ~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~--~~kli 173 (447)
+..++.++++|||+|++.+|.|+++.. .+...+. +++.++ ..|++++++.+++ . ++++|
T Consensus 115 ~~~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~--~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~v 178 (397)
T PRK06939 115 NGGLFETLLGKEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMADLEAQLKEAKEAGARHKLI 178 (397)
T ss_pred HHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhhhccCCCCeEE
Confidence 999999999999999999998876532 2233333 333322 2588999888864 2 56777
Q ss_pred EEcCCCCC-C-CCChHHHHHHHHHhCCEEEEehhhhccccccc-c--CC-CCC-CcccEEEeCCCcccCCCCCceEEeec
Q 013217 174 IAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAAS-V--VA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 246 (447)
Q Consensus 174 i~~~~~~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~-~--~~-~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~ 246 (447)
+.+...++ + ..++++|.++|+++|+++++|++|..|..... . .+ ..+ +..|++++|+||+++|+++|++++++
T Consensus 179 ~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~ 258 (397)
T PRK06939 179 ATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRK 258 (397)
T ss_pred EEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCH
Confidence 76633322 2 57899999999999999999999866644221 0 00 011 24689999999999889999999887
Q ss_pred CCcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeE
Q 013217 247 DPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 325 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 325 (447)
++.+.+.....+.. .+++.....+++..+++.+.. ..+..+++.++++.+.+.|.+.|+++..+ ...++
T Consensus 259 ------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~ 328 (397)
T PRK06939 259 ------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMTAAGFTLGPG--EHPII 328 (397)
T ss_pred ------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEE
Confidence 67777665433322 234444445555556665532 34667888899999999998888766542 22333
Q ss_pred EecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 326 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
++.+.. +.+..++.+.|.+.||.+.....|.. +....+||++++.+++ ++|++++++.|.++++.
T Consensus 329 ~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~~~--~~~~~~iRi~~~~~~~----~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 329 PVMLGD-AKLAQEFADRLLEEGVYVIGFSFPVV--PKGQARIRTQMSAAHT----KEQLDRAIDAFEKVGKE 393 (397)
T ss_pred EEEECC-HHHHHHHHHHHHHCCceEeeeCCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHH
Confidence 333321 23456788888778999864322211 1123579999887777 99999999999888764
No 52
>PLN00175 aminotransferase family protein; Provisional
Probab=99.94 E-value=1.7e-24 Score=215.37 Aligned_cols=340 Identities=15% Similarity=0.102 Sum_probs=224.2
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
...|+|..+... .++.+++++.+.+... ...|+. .....++++...+++.+.+|.+ ++. +|.+|+|
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~------~~G~~~Lr~aia~~~~~~~g~~~~~~~---~I~vt~G 123 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYAR------GFGVPELNSAIAERFKKDTGLVVDPEK---EVTVTSG 123 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCC------CCCCHHHHHHHHHHHHHHhCCCCCCCC---CEEEeCC
Confidence 466888765553 4778888888776542 122332 2223456555566777777754 331 2445888
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 174 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii 174 (447)
+ +|+..++.++++|||+|++.+|.|..+.. .+...|. +++.++++++++.+|+++|++.+.+ ++|+|+
T Consensus 124 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~l~~~~~~-~~k~i~ 192 (413)
T PLN00175 124 CTEAIAATILGLINPGDEVILFAPFYDSYEA--------TLSMAGA--KIKTVTLRPPDFAVPEDELKAAFTS-KTRAIL 192 (413)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEECCcccCCCCHHHHHHhcCc-CceEEE
Confidence 6 89988999999999999999988766531 2344554 5556666655578999999999877 899999
Q ss_pred EcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCC--CCC---cccEEEeCCCccc--CCCCCceE
Q 013217 175 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCDVVTTTTHKSL--RGPRGGMI 242 (447)
Q Consensus 175 ~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~~~---~~Di~~~s~~K~l--~Gp~gG~i 242 (447)
+++++||+ .. ++++|.++|+++|+++++|+++ ..+.+.+...+ .+. ...+++.|++|.+ +|.|.||+
T Consensus 193 i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~ 271 (413)
T PLN00175 193 INTPHNPTGKMFTREELELIASLCKENDVLAFTDEVY-DKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWA 271 (413)
T ss_pred ecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEeccc-CccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeee
Confidence 98888886 44 4678999999999999999995 44443321111 111 2347889999986 58888999
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCC
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 322 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 322 (447)
++++ ++.+.+.........+.+...+. +++.+++.. ...+++..+.+.++++.+.+.|++.|+.+..+ ..+
T Consensus 272 v~~~------~l~~~l~~~~~~~~~~~s~~~Q~-a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~g~ 342 (413)
T PLN00175 272 IAPP------HLTWGVRQAHSFLTFATATPMQW-AAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGFKVYPS-SGT 342 (413)
T ss_pred EeCH------HHHHHHHHHHhhccCCCCHHHHH-HHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Cee
Confidence 9987 67666654332212233333333 334455432 22346777888899999999999988876543 456
Q ss_pred eeEEecCCCCCC-CHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 323 HLVLVDLRPMGI-DGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 323 ~~~~v~~~~~~~-~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+++|+++.+.+. +..++.+.| +++||.+.++...+.........+||++.. . ++++++.++.|.+.++
T Consensus 343 ~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~----~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 343 YFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--D----EETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--C----HHHHHHHHHHHHHHHh
Confidence 778888754444 455666655 678999954321111111124589999752 3 7888888888877654
No 53
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.5e-24 Score=212.98 Aligned_cols=335 Identities=13% Similarity=0.055 Sum_probs=219.2
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC--CCCCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g--~~~~~~~~~v~~~sG 95 (447)
...++|..+++. +++.+.+++...+.+.. .+|+.. .....+.+...+++.+.+| ++++ +|.+++|
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~------~G~~~lr~~la~~~~~~~~~~~~~~----~i~~t~g 92 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTHN------LGIPELREALARYVSRLHGVATPPE----RIAVTSS 92 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC------CCCHHHHHHHHHHHHHHhCCCcCcc----eEEEeCC
Confidence 456889888874 47889999887665421 123321 2234555556678888888 5554 3334666
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC--CCCCCCHHHHHHHhhhhCCcE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKL 172 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~id~~~l~~~~~~~~~kl 172 (447)
+ +++..++.++++|||+|++.+|.|..+.. .+...|. +++.++++. +++.+|++++++.+++ ++++
T Consensus 93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~ 161 (382)
T PRK06108 93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGA--RVVCVPLDFGGGGWTLDLDRLLAAITP-RTRA 161 (382)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCC--EEEEeeCCCCCCCccCCHHHHHHhcCc-cceE
Confidence 5 89998999999999999999998765431 2234454 444555542 3457999999998876 8999
Q ss_pred EEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcccccc-c-cCCCCCC-----cccEEEeCCCccc--CCCC
Q 013217 173 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-S-VVADPFK-----YCDVVTTTTHKSL--RGPR 238 (447)
Q Consensus 173 ii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~-~-~~~~~~~-----~~Di~~~s~~K~l--~Gp~ 238 (447)
|+++.++||+ .. ++++|.++|+++|+++++|+++. ++... + ..+.... ...+++.|+||++ +|.|
T Consensus 162 i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 240 (382)
T PRK06108 162 LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE-RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWR 240 (382)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh-hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccc
Confidence 9988788875 33 46889999999999999999964 33332 1 1111111 2348889999986 4777
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeee
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 317 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 317 (447)
.|++++++ ++.+.+.........+ ++.....+...++... ...+++..+++.++++.+.+.|.+. |+++..
T Consensus 241 iG~~~~~~------~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 312 (382)
T PRK06108 241 LGWLVAPP------ALGQVLEKLIEYNTSC-VAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAK 312 (382)
T ss_pred eeeeeCCH------HHHHHHHHHHHhcccC-CChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 89999987 6766665432211222 2333333333344432 1234677788888888999999874 777654
Q ss_pred CCCCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 318 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 318 ~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+ ....++|+++.. ..+..++.+.| +++||.+..+... .+...+++|+++.. + ++++++..+.|.++++
T Consensus 313 p-~~g~~~~~~l~~-~~~~~~~~~~ll~~~gV~v~pg~~f---~~~~~~~~Ris~~~--~----~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 313 P-DGAMYAFFRIPG-VTDSLALAKRLVDEAGLGLAPGTAF---GPGGEGFLRWCFAR--D----PARLDEAVERLRRFLA 381 (382)
T ss_pred C-CeeEEEEEeCCC-CCCHHHHHHHHHHhCCEEEeCchhh---CCCCCCEEEEEecC--C----HHHHHHHHHHHHHHHh
Confidence 3 335566777753 23566676655 6789999543211 12234689999775 4 8899988888877653
No 54
>PLN02483 serine palmitoyltransferase
Probab=99.94 E-value=7.6e-25 Score=221.24 Aligned_cols=333 Identities=18% Similarity=0.201 Sum_probs=218.0
Q ss_pred hcCeeEecCCCCC---------CHHHHHHHhhhhhccCCCCCCCCcc-cCchhHHHHHHHHHHHHHHHHcCCCCCcccee
Q 013217 20 FKSLELIASENFT---------SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVN 89 (447)
Q Consensus 20 ~~~i~l~~~~n~~---------~~~v~~a~~~~~~~~~~~g~~~~~~-~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~ 89 (447)
+..|+| .|.||+ ++++.+++. +|..+..+.|. ++......++| +.+++++|.+. .
T Consensus 100 ~~~~n~-~s~~YLgl~~~~~~~~~~~~~ai~-----~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----a 164 (489)
T PLN02483 100 RRCLNL-GSYNYLGFAAADEYCTPRVIESLK-----KYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----A 164 (489)
T ss_pred ceEEEe-ecCCccCcCCCCHHHHHHHHHHHH-----HhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----E
Confidence 445665 577764 244455543 34455556664 34355566666 68899999764 3
Q ss_pred eecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh--
Q 013217 90 VQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-- 167 (447)
Q Consensus 90 v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~-- 167 (447)
+.+++|+.+|.+++.++++|||+|++.++.|.+... .+...|. +++.++.+ |++++++.+++
T Consensus 165 i~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~--------~~~~~Ga--~v~~~~~~------d~~~le~~l~~~i 228 (489)
T PLN02483 165 IVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN--------GARGSGA--TIRVFQHN------TPSHLEEVLREQI 228 (489)
T ss_pred EEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH--------HHHHcCC--eEEEEeCC------CHHHHHHHHHhhh
Confidence 445899999998999999999999999999887642 2345565 44444332 45666665532
Q ss_pred ----hCC-----cEEEEcCCCCC---CCCChHHHHHHHHHhCCEEEEehhhhcccccc-c--cC-CCCC--CcccEEEeC
Q 013217 168 ----FRP-----KLIIAGASAYP---RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF--KYCDVVTTT 229 (447)
Q Consensus 168 ----~~~-----klii~~~~~~~---~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~-~--~~-~~~~--~~~Di~~~s 229 (447)
.++ +++++..+.++ ...++++|.++|+++|+++++|++|+.|.... + .. ...+ ...|++++|
T Consensus 229 ~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~S 308 (489)
T PLN02483 229 AEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGT 308 (489)
T ss_pred hccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEe
Confidence 122 55555433332 26799999999999999999999998665421 1 00 0111 247899999
Q ss_pred CCcccCCCCCceEEeecCCcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcCh----hHHHHHHHHHHHHHHH
Q 013217 230 THKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSP----EFKVYQNKVVSNCRAL 304 (447)
Q Consensus 230 ~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~----~~~~~~~~~~~~~~~l 304 (447)
+||++ |+.||++++++ ++.+.+........ .++.+...+++..++++.+... ...+..+++.++++++
T Consensus 309 fSKs~-g~~GG~i~~~~------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l 381 (489)
T PLN02483 309 FTKSF-GSCGGYIAGSK------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFF 381 (489)
T ss_pred cchhc-ccCceEEEcCH------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHH
Confidence 99998 55789999887 77777765432222 2233444444555567654421 2355678899999999
Q ss_pred HHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHH
Q 013217 305 ASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 384 (447)
Q Consensus 305 ~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di 384 (447)
.+.|++.|+.+..+ .++..+++-+... ....++.+.|.++||.+.....|. .+...+.+|++++..++ ++|+
T Consensus 382 ~~~L~~~G~~v~~~-~~sp~~~l~l~~~-~~~~~~~~~Ll~~GI~v~~~~fp~--~p~~~~~vRi~isa~~t----~edI 453 (489)
T PLN02483 382 RSELQKMGFEVLGD-NDSPVMPIMLYNP-AKIPAFSRECLKQNVAVVVVGFPA--TPLLLARARICISASHS----REDL 453 (489)
T ss_pred HHHHHHCCCcccCC-CCCCEEEEEECCH-HHHHHHHHHHHHCCcEEeeeCCCC--CCCCCceEEEEeCCCCC----HHHH
Confidence 99999999876643 2344444332211 134567777778899996432222 22334689999988887 9999
Q ss_pred HHHHHHHHHHHHHH
Q 013217 385 VAIADFIHEGVEIT 398 (447)
Q Consensus 385 ~~l~~~i~~~l~~~ 398 (447)
+++++.|++++...
T Consensus 454 d~~l~~L~~~~~~~ 467 (489)
T PLN02483 454 IKALEVISEVGDLV 467 (489)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987643
No 55
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.94 E-value=1.6e-24 Score=212.52 Aligned_cols=328 Identities=19% Similarity=0.186 Sum_probs=219.3
Q ss_pred cCeeEecCCC---CCCHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH
Q 013217 21 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 96 (447)
Q Consensus 21 ~~i~l~~~~n---~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs 96 (447)
..|+|..+++ ..+|.+++++...+. +|..++++.++..| .+...+++ +.++++++.+. .+.+++|+
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~ 86 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEELE----EELAEWKGTEA-----ALLFSSGY 86 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCC-----EEEECchH
Confidence 4577777643 235899999988774 45455544433222 23333443 67888888543 45568999
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh---CCcEE
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLI 173 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~---~~kli 173 (447)
+++..++.++++|||+|++.++.|++... .+...|. +++.++ .+|++++++++++. ++++|
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~~~~~~~~~~~~v 150 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLID--------GCRLSGA--RVRRYR------HNDVEHLERLLEKNRGERRKLI 150 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEec------CCCHHHHHHHHHHcccCCCeEE
Confidence 88887888889999999999888766532 2233443 333322 26899999988753 46777
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccC---C-CCC--CcccEEEeCCCcccCCCCCceEEee
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV---A-DPF--KYCDVVTTTTHKSLRGPRGGMIFFK 245 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~---~-~~~--~~~Di~~~s~~K~l~Gp~gG~i~~~ 245 (447)
+++.+++++ ..|+++|.++|+++|+++++|++|+.|....... . ..+ ...+++++|+||+|+ ++||+++.+
T Consensus 151 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~gG~~~~~ 229 (360)
T TIGR00858 151 VTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYGAYVAGS 229 (360)
T ss_pred EEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccCcEEEcC
Confidence 777554443 6799999999999999999999987664432100 0 111 146899999999884 577999887
Q ss_pred cCCcchhhHHHHhhhccCCC-CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee
Q 013217 246 KDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 324 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~-~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 324 (447)
+ ++.+.+.....+. ..++++...+++...+++.... .++..+++.++++++.+.|.+.++++..+ ...+
T Consensus 230 ~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~ 299 (360)
T TIGR00858 230 Q------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEALGFTLMPS--CTPI 299 (360)
T ss_pred H------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCccCCC--CCCE
Confidence 7 6766665433222 2233455556566667765432 24567889999999999999888776532 3446
Q ss_pred EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 325 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 325 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
+|+.+.. ..+..++.+.|.++||.+.....++. +....++|++++.+++ ++|++++++.|+
T Consensus 300 ~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~~----~~~i~~~l~~l~ 360 (360)
T TIGR00858 300 VPVIIGD-NASALALAEELQQQGIFVGAIRPPTV--PAGTSRLRLTLSAAHT----PGDIDRLAEALK 360 (360)
T ss_pred EEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEEcCCCC----HHHHHHHHHhhC
Confidence 6776642 23467888889899999965322221 1123579999998888 999999988763
No 56
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.94 E-value=2.7e-25 Score=217.44 Aligned_cols=297 Identities=18% Similarity=0.171 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCCCCEEEEecCCCCcccCCCccccccccccccce
Q 013217 63 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 141 (447)
Q Consensus 63 ~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 141 (447)
...++| +.+++++|.+. .+.++||++|+..++.++ ++|||+|+++.+.|.+... .+...|
T Consensus 19 ~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~--------~~~~~g-- 79 (352)
T cd00616 19 KVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN--------AILLLG-- 79 (352)
T ss_pred HHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH--------HHHHcC--
Confidence 345565 57889999753 344578999999999998 6899999999988765532 223344
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC
Q 013217 142 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK 221 (447)
Q Consensus 142 ~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~ 221 (447)
++++.++++++++.+|++++++.+++ ++++|++++ .++...|+++|.++|+++|+++++|++|+.|....+. ++.
T Consensus 80 ~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~~ 154 (352)
T cd00616 80 ATPVFVDIDPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KVG 154 (352)
T ss_pred CeEEEEecCCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---Ecc
Confidence 35666667654788999999999876 899988864 3444789999999999999999999999888664432 111
Q ss_pred -cccEEEeCCC--cccCCCCCceEEeecCCcchhhHHHHhhhccCCCCCC--------CC-cHHHHHHHHHHHHHhcChh
Q 013217 222 -YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQG--------GP-HNHTIGGLAVCLKHAQSPE 289 (447)
Q Consensus 222 -~~Di~~~s~~--K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g--------~p-~~~~~aal~~al~~~~~~~ 289 (447)
..|+.++|+| |+++++.||+++++++ ++.+++......+... .+ ....+..+.+++.......
T Consensus 155 ~~~d~~~~S~~~~K~~~~~~gg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~ 229 (352)
T cd00616 155 TFGDAGAFSFHPTKNLTTGEGGAVVTNDE-----ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEK 229 (352)
T ss_pred cCcceeEEcCCCCCCCcccCceEEEECCH-----HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHh
Confidence 2578888866 9998888898888764 5555544321111100 00 0001111111222122234
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCC----CCeeEEecCCCC-CCCHHHHHHHHhhcCeEEccCCCCCCCCC--
Q 013217 290 FKVYQNKVVSNCRALASRLVE-LGYKLVSGGS----DNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSA-- 361 (447)
Q Consensus 290 ~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~----~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~-- 361 (447)
+++..++..++++++.+.|.+ .|++++.... ..+.+.+.+... +.+..++.+.|.+.||.++..+.|....+
T Consensus 230 ~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~ 309 (352)
T cd00616 230 LDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPY 309 (352)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhh
Confidence 567788889999999999988 5888765422 123334444321 45788999999999998876544432110
Q ss_pred ----------C------CCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 362 ----------L------VPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 362 ----------~------~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
. ....+|++++..+| ++||++++++|+
T Consensus 310 ~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t----~~di~~i~~~l~ 352 (352)
T cd00616 310 KKLLGYPPGDLPNAEDLAERVLSLPLHPSLT----EEEIDRVIEALR 352 (352)
T ss_pred hhccCCCcCCChHHHHHHhCeEEccCCCCCC----HHHHHHHHHHhC
Confidence 0 12579999998888 999999999873
No 57
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.8e-24 Score=210.77 Aligned_cols=333 Identities=15% Similarity=0.117 Sum_probs=217.4
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
.+.++|..+++. .++.+.+++...+.+....+|+. .| ...+.+.+.+++.+.+|.+ +++ +|.+|+|
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G---~~~lr~aia~~~~~~~g~~~~~~~---~I~it~G 101 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SG---IQEFHEAVTEYYNNTHNVILNADK---EVLLLMG 101 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CC---cHHHHHHHHHHHHHHhCCCCCCCC---eEEECCC
Confidence 456888777764 57888888887664321123321 12 2345544556666666653 411 4556888
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|+++.. .+...|. ++++++++++ ++.+|++++++.+.+ ++++|
T Consensus 102 ~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v 170 (399)
T PRK07681 102 SQDGLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGA--TSYYMPLKKENDFLPDLELIPEEIAD-KAKMM 170 (399)
T ss_pred cHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEE
Confidence 7 88888899999999999999998876532 2334454 6666667644 457899999988866 89999
Q ss_pred EEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC---CC---cccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~~---~~Di~~~s~~K~l--~Gp~gG 240 (447)
+++.|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+....+ +. ...+++.|++|.+ +|.|.|
T Consensus 171 ~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG 249 (399)
T PRK07681 171 ILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAY-AEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIG 249 (399)
T ss_pred EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeE
Confidence 999878886 555 678888999999999999996 444433211111 11 1347889999987 577889
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
|++.++ ++.+.+.........+. +.....+...++... ...+++..+.+.++++.+.+.|.+.|+++..+ .
T Consensus 250 ~~i~~~------~l~~~~~~~~~~~~~~~-s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~ 320 (399)
T PRK07681 250 YMIGNE------EIVRALTQFKSNTDYGV-FLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP-A 320 (399)
T ss_pred EEecCH------HHHHHHHHHHhhcccCC-CHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-C
Confidence 999877 67777655432111122 222222333344321 12335566777888888999998888876433 3
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHh-hcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
...++|+++.. +.+..++.+.|. ++||.+..+... ....++++|+++. .+ ++++++..+.|++
T Consensus 321 ~g~f~~~~l~~-~~~~~~~~~~l~~~~gv~v~pg~~f---~~~~~~~iRis~~--~~----~~~~~~~l~~l~~ 384 (399)
T PRK07681 321 GSMFVWAEIPK-GWTSLSFAYALMDRANVVVTPGHAF---GPHGEGFVRIALV--QD----EEVLQQAVENIRN 384 (399)
T ss_pred eeeEEEEECCC-CCCHHHHHHHHHHhCCEEEeCChhh---CcCCCCeEEEEec--CC----HHHHHHHHHHHHH
Confidence 46677888753 456667766654 599999643211 1112468999975 23 7888888888765
No 58
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=2.5e-24 Score=210.30 Aligned_cols=310 Identities=17% Similarity=0.144 Sum_probs=204.1
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc
Q 013217 28 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 107 (447)
Q Consensus 28 ~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~ 107 (447)
+-++.|++|+++|.....+ | +. .+.+.+.+++++++++|.+. + +.++++++|+.+++.+++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~---------~~----~~~~~~~~~~~~a~~~g~~~----~-~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y---------FE----IKELVNKTGEYIANLLGVED----A-VIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C---------CC----HHHHHHHHHHHHHHhhCCCe----E-EEEcCHHHHHHHHHHHHh
Confidence 3446799999999887643 2 11 12334455688999999874 2 334666799999999999
Q ss_pred CCCC---------------EEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 013217 108 KPHD---------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 172 (447)
Q Consensus 108 ~pgd---------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~kl 172 (447)
+||| +|+++.+.+. .+...+ ...+.+.|. +++.++. ++.+|++++++++++ +|++
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~-~~~~~~---~~~~~~~g~--~~v~v~~---~~~~d~~~le~ai~~-~t~a 151 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHNV-DYGAPV---ETMVRLGGG--KVVEAGY---ANECSAEQLEAAITE-KTAA 151 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccch-hcCCch---HHHHHhcCC--eEEEEcC---CCCCCHHHHHHhcCh-hceE
Confidence 9998 7776553221 110000 012334454 4555444 356999999999987 8997
Q ss_pred EEE-cC-CCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCCcccCCCCCceEEeecCC
Q 013217 173 IIA-GA-SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 248 (447)
Q Consensus 173 ii~-~~-~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~gG~i~~~~~~ 248 (447)
|++ ++ +++.+ ..|+++|.++|+++|+++++|++|...+ ..... ++|++++|+||+|+||++|+++.++
T Consensus 152 i~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~-- 223 (363)
T TIGR01437 152 ILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK-- 223 (363)
T ss_pred EEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH--
Confidence 664 44 34334 7899999999999999999999985221 11111 4899999999999999999988866
Q ss_pred cchhhHHHHhhhccCCC---C-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeC--CC-
Q 013217 249 VLGVELESAINNAVFPG---L-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG--GS- 320 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~---~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~--~~- 320 (447)
++.+.+....... . .|+ ..++++..|++.+...+ .+..++..++++.+.+.|.+ .|+++... ..
T Consensus 224 ----~~i~~~~~~~~~~~~~~~~~~---~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~ 295 (363)
T TIGR01437 224 ----KYIEWVKLQSKGIGRAMKVGK---ENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAG 295 (363)
T ss_pred ----HHHHHHHhccCCCcceeccCH---HHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Confidence 5555543221111 0 122 33677777888766433 23344555677789999988 58887642 11
Q ss_pred ---CCeeEEecCCCCCCCHHHHHHHHhhcC--eEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 321 ---DNHLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 321 ---~~~~~~v~~~~~~~~~~~~~~~L~~~g--I~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+...+.++....++++.++.+.|.+.| |.++... ...+.+|++... ++++|++.++++|+++
T Consensus 296 ~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~-------~~~~~~~l~~~~-----~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 296 RDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYK-------ANEGIIEIDPRS-----VTGGQLDIIVERIREI 362 (363)
T ss_pred CcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeee-------ecCCeEEEEeec-----CCHHHHHHHHHHHHHh
Confidence 112223444335778999999998767 6665321 124578888764 3389999999999875
No 59
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=1.7e-24 Score=215.39 Aligned_cols=294 Identities=19% Similarity=0.139 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCC--CCEEEEecCCCCcccCCCcccccccccccc--c
Q 013217 66 ELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS--I 140 (447)
Q Consensus 66 ~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~p--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g--~ 140 (447)
++.+.+++++++++|++.+++ .+. ++|+ +++.+++.+++++ ||+|++.++.|+++.... ...+ .
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v--~~~-~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~--------~~~~~~~ 132 (398)
T cd00613 64 QALFELQTMLCELTGMDVANA--SLQ-DEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVA--------RTRGEPL 132 (398)
T ss_pred HHHHHHHHHHHHHHCCCccce--ecc-CchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHH--------HHhcccC
Confidence 455566789999999875432 233 4455 5566666666776 999999999888764321 1222 0
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCCh-HHHHHHHHHhCCEEEEehhhhccccccccCCC
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVAD 218 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~-~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~ 218 (447)
+.+++.++++ +++.+|++++++++.+ +|++|+++.++..+ ..|+ ++|+++|+++|+++++|++|..|.........
T Consensus 133 g~~~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~ 210 (398)
T cd00613 133 GIEVVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEY 210 (398)
T ss_pred CcEEEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHc
Confidence 1244455554 3467999999999977 89999888665444 5565 99999999999999999998665432211111
Q ss_pred CCCcccEEEeCCCccc-----CCCCCceEEeecCCcchhhHHHHhhhcc-----------------C----C--CCCCCC
Q 013217 219 PFKYCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINNAV-----------------F----P--GLQGGP 270 (447)
Q Consensus 219 ~~~~~Di~~~s~~K~l-----~Gp~gG~i~~~~~~~~~~~~~~~i~~~~-----------------~----~--~~~g~p 270 (447)
++|++++|+|||+ +||++|++++++ ++.+.+.... . . ...+++
T Consensus 211 ---~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~ 281 (398)
T cd00613 211 ---GADIVVGNLQKTGVPHGGGGPGAGFFAVKK------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATS 281 (398)
T ss_pred ---CCCEEEeeccccCCCCCCCCCceeEEEEhh------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccc
Confidence 4899999999997 146668999887 4544431100 0 0 001222
Q ss_pred c-----HHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC-CCCHHHHHHHHh
Q 013217 271 H-----NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGARVEKILD 344 (447)
Q Consensus 271 ~-----~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~L~ 344 (447)
+ ....++.++++..+...++++..+++.++++++.+.|.+.+......+...+.+++.+... +.+..++.+.|.
T Consensus 282 ~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~ 361 (398)
T cd00613 282 NICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALI 361 (398)
T ss_pred cceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhh
Confidence 2 2223333344555555677888899999999999999886544322222223345555431 335677888888
Q ss_pred hcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 345 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 345 ~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
+.||.+.... | ...+.||++++.++| ++|+++++++|
T Consensus 362 ~~gi~~~~~~-~-----~~~~~lRis~~~~~t----~edid~~~~~L 398 (398)
T cd00613 362 DGGFHAPTMY-L-----PVDGTLMIEPTETET----KEELDALLEAL 398 (398)
T ss_pred hcCccccccc-c-----CCCCeEEEEcCCCCC----HHHHHHHHHhC
Confidence 9999864311 1 124689999999998 99999998764
No 60
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=2.5e-24 Score=211.14 Aligned_cols=324 Identities=14% Similarity=0.099 Sum_probs=210.2
Q ss_pred EecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cc---cCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHH
Q 013217 25 LIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RY---YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 99 (447)
Q Consensus 25 l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~---~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~ 99 (447)
-+.+..++.+++++++.++..+ + +.|.. .. ..+.+...+++ +.+++++|++. +..++|+ +++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~~------i~~~~g~t~al 72 (361)
T cd06452 6 PIQRGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMDE------ARVTPGAREGK 72 (361)
T ss_pred hhhcCCCCCHHHHHHHHHHhcc-c--CCccccccccccccCchHHHHH----HHHHHHcCCce------EEEeCCHHHHH
Confidence 3556778899999999877632 1 23221 11 11123344444 68899999842 2235554 899
Q ss_pred HHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhh------hCCcE
Q 013217 100 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL------FRPKL 172 (447)
Q Consensus 100 ~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~------~~~kl 172 (447)
..++.++++|||+|++..+.|.+.+. .+...|. +++.++.+++ ++.+|++++++++++ .++++
T Consensus 73 ~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~l 142 (361)
T cd06452 73 FAVMHSLCEKGDWVVVDGLAHYTSYV--------AAERAGL--NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPAL 142 (361)
T ss_pred HHHHHHhcCCCCEEEEcCCcchHHHH--------HHHhcCC--EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceE
Confidence 99999999999999998877665431 2234454 5555555533 358999999998863 26889
Q ss_pred EEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCC-CCceEEeecCCc
Q 013217 173 IIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP-RGGMIFFKKDPV 249 (447)
Q Consensus 173 ii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp-~gG~i~~~~~~~ 249 (447)
|+++++++++ ..|+++|.++|+++|+++++|++|+.|......... ++|++++|+||++++| ++|++++++
T Consensus 143 v~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~~~~~G~l~~~~--- 216 (361)
T cd06452 143 ALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKEL---GADFIVGSGHKSMAASAPIGVLATTE--- 216 (361)
T ss_pred EEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHc---CCCEEEecCCccccCCCCeEEEEECH---
Confidence 9998777764 779999999999999999999999876442211111 4799999999999654 459999987
Q ss_pred chhhHHHHhhhccCC-------CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC-C
Q 013217 250 LGVELESAINNAVFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG-S 320 (447)
Q Consensus 250 ~~~~~~~~i~~~~~~-------~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~ 320 (447)
++.+++.....+ ...+++....++++..+++.+. +..+...+..++++++.+.|++. |++++... .
T Consensus 217 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~ 291 (361)
T cd06452 217 ---EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPK 291 (361)
T ss_pred ---HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCC
Confidence 676766543221 1122333333444444555432 22233455566778999999986 99887421 2
Q ss_pred CCeeEEecCCC-------CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 321 ~~~~~~v~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
...++.++... ...++.++.+.|.++||.+.. ++ ....+|+++.. .+++|+++++++|++
T Consensus 292 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~~-----~~~~~ri~~~g-----~~~e~~~~l~~al~~ 358 (361)
T cd06452 292 NHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIK---PG-----LTRYFKLSTYG-----LTWEQVEYVVDAFKE 358 (361)
T ss_pred CCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEc---CC-----CceEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 33344444321 011344688899889998631 11 13478988643 348999999999986
Q ss_pred HH
Q 013217 394 GV 395 (447)
Q Consensus 394 ~l 395 (447)
++
T Consensus 359 ~~ 360 (361)
T cd06452 359 IA 360 (361)
T ss_pred Hh
Confidence 53
No 61
>PRK08960 hypothetical protein; Provisional
Probab=99.94 E-value=4.4e-24 Score=211.35 Aligned_cols=338 Identities=12% Similarity=0.087 Sum_probs=214.2
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sG 95 (447)
++.+.|..+++. +|+.+++++.+.+.+.. .+|+.. .....+.+...+++.+.+|. +++ +|.+|+|
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~~------~g~~~lr~~ia~~~~~~~g~~~~~~----~i~it~G 100 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTAA------RGLPALREAIAGFYAQRYGVDVDPE----RILVTPG 100 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCCC------CCCHHHHHHHHHHHHHHhCCCCChh----hEEEccC
Confidence 456888877774 58899999988776421 123221 12344554445566655554 454 3445777
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|+++.. .+...|. +++.++++.+ ++.+|++++++++++ +++++
T Consensus 101 ~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i 169 (387)
T PRK08960 101 GSGALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEG--AAQLVPVGPDSRYQLTPALVERHWNA-DTVGA 169 (387)
T ss_pred cHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--eEEEEecCcccCCCCCHHHHHHHhCc-cceEE
Confidence 6 89999999999999999999999887642 2234454 4444445543 457999999998877 78888
Q ss_pred EEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCccc--CCCCCceEEe
Q 013217 174 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFF 244 (447)
Q Consensus 174 i~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l--~Gp~gG~i~~ 244 (447)
+++.++||+ ..+ +++|+++|+++|+++++|+++ .++.+.+.....+. ...+++.|++|.+ +|.|.|++++
T Consensus 170 ~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~ 248 (387)
T PRK08960 170 LVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIY-HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVA 248 (387)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEc
Confidence 888788886 555 467777899999999999985 44443321111111 1237789999986 6788899999
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 324 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 324 (447)
++ ++.+.+.........+.+...+.+ ...++........++..+.+.++++.+.+.|++.|+.+...+..+.+
T Consensus 249 ~~------~~~~~~~~~~~~~~~~~s~~~q~a-~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f 321 (387)
T PRK08960 249 PP------AAVPELEKLAQNLYISASTPAQHA-ALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFY 321 (387)
T ss_pred CH------HHHHHHHHHHhhhccCCCHHHHHH-HHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEE
Confidence 87 677666554322222222333332 33344321112345666777888888999998888765322234667
Q ss_pred EEecCCCCCCCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 325 ~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+|+++.....+..++.+. ++++||.+..+...+. +...+++|+++.. . .+.+....+.|++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~~iRi~~~~--~----~~~l~~al~~l~~~~ 385 (387)
T PRK08960 322 LYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR--HQAGQHVRFAYTQ--S----LPRLQEAVERIARGL 385 (387)
T ss_pred EEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC--CCCCCeEEEEecC--C----HHHHHHHHHHHHHHH
Confidence 788876433456667665 5679999965432221 1124589999763 2 555555555555443
No 62
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=1.3e-23 Score=204.97 Aligned_cols=319 Identities=15% Similarity=0.077 Sum_probs=217.9
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
+.+.++.+...+.+.+ |+|...+..|. ...++|+.+++++++++|+++++... +.+++||++|..++.+. +.|+
T Consensus 35 ~~~~~~~~~~~~~~n~--gnp~~~~~~g~-~~~~~e~~~~~~~a~l~g~~~~~~~G-~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 35 DYSALKRFFSFSINNC--GDPYSKSNYPL-NSFDFERDVMNFFAELFKIPFNESWG-YITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred CHHHHHHHHHhhhccC--CCccccCCCCC-ChHHHHHHHHHHHHHHhCCCCCCCCE-EEecChHHHHHHHHHHHHHhCCC
Confidence 3455555555555533 55655322222 24568888999999999998654312 22344568887766543 4688
Q ss_pred CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEcCCCC-CC-CCCh
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAY-PR-DFDY 186 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~~~~~-~~-~~~~ 186 (447)
++|++++.+|.+... .+...|.....++ ++ .++.+|+++|++++++. +|.+|+++..++ .+ ..|+
T Consensus 111 ~~ii~s~~~H~Sv~k--------a~~~lg~~~~~V~--~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi 179 (380)
T PRK02769 111 GTLYYSKDTHYSVSK--------IARLLRIKSRVIT--SL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI 179 (380)
T ss_pred cEEEeCCCceehHHH--------HHHHcCCCCceec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH
Confidence 999999888877542 2334454334344 45 46889999999999873 388888774333 33 8899
Q ss_pred HHHHHHHHHhC---CEEEEehhhhccccccccCCCCCC---cccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhh
Q 013217 187 PRMRQIADAVG---ALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 259 (447)
Q Consensus 187 ~~i~~ia~~~g---~~livD~a~~~g~~~~~~~~~~~~---~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~ 259 (447)
++|+++|+++| +++++|+||+.+.++......+++ ++|.+++|+||++++|.| |+++++++ ..+.+.
T Consensus 180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~------~~~~~~ 253 (380)
T PRK02769 180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK------YVERIS 253 (380)
T ss_pred HHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh------hhhhcc
Confidence 99999999998 699999999877664321111222 599999999999988999 99999983 433332
Q ss_pred h------ccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCC
Q 013217 260 N------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 333 (447)
Q Consensus 260 ~------~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~ 333 (447)
. ...+...|+.+....++++.+++.+...|+++..++..++++++.+.|++.|++++..+ ... ++.++...
T Consensus 254 ~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p-~~~--~v~f~~~~ 330 (380)
T PRK02769 254 VDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNP-NSI--TVVFPCPS 330 (380)
T ss_pred cCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC-Cce--EEEEcCCC
Confidence 1 11123467888888889999999998889999999999999999999999999988643 232 33343321
Q ss_pred CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 334 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 334 ~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
+++. .|..++.. +..+|+..+.-++ .+.++.+.+-|.+.+..
T Consensus 331 ---~~~~-----~~w~l~~~----------~~~~hi~~~~~~~----~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 331 ---ERIW-----KKWHLATS----------GNQAHIITMPHHN----KQQIDSLIDELIFDLKN 372 (380)
T ss_pred ---HHHH-----hCeeEccc----------CCEEEEEECCCCC----HHHHHHHHHHHHHHHhc
Confidence 2221 45555321 2479988776666 78888888777766653
No 63
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.94 E-value=1.3e-24 Score=213.93 Aligned_cols=324 Identities=15% Similarity=0.168 Sum_probs=215.1
Q ss_pred CCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cC
Q 013217 30 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 108 (447)
Q Consensus 30 n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~ 108 (447)
..+++..++++...+.+.+. +. .+...++| +.+++++|++. .+.++||++|+.+++.++ ++
T Consensus 10 p~~~~~e~~~~~~~l~~~~~--------~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~ 71 (379)
T PRK11658 10 PAMGDEELAAVKEVLRSGWI--------TT-GPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIG 71 (379)
T ss_pred CCCCHHHHHHHHHHHHcCCc--------cC-CHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCC
Confidence 34566667777777755321 11 23466777 57889999874 244588889999999999 89
Q ss_pred CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHH
Q 013217 109 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR 188 (447)
Q Consensus 109 pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~ 188 (447)
|||+|+++++.|.+... .+...|. +++.++++++++.+|++++++++++ +||+|+...+ ++...|+++
T Consensus 72 ~Gd~Viv~~~~~~~~~~--------~~~~~G~--~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~~ 139 (379)
T PRK11658 72 PGDEVITPSLTWVSTLN--------MIVLLGA--TPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLDA 139 (379)
T ss_pred CCCEEEECCCcHHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHHH
Confidence 99999999988776532 2334454 6666667766778999999999987 8999875542 344789999
Q ss_pred HHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhccCCCC--
Q 013217 189 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-- 266 (447)
Q Consensus 189 i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~-- 266 (447)
|.++|+++|+++++|++|+.|....+...... +.++++++.+|++.+++||+++++++ ++.+++......|.
T Consensus 140 i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~-----~~~~~~~~~~~~G~~~ 213 (379)
T PRK11658 140 IRAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD-----ELADRLRSLKFHGLGV 213 (379)
T ss_pred HHHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH-----HHHHHHHHHHHcCCCc
Confidence 99999999999999999988877654322111 34677788889999999999998764 56655543221111
Q ss_pred ------------------CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeee-CCC---CC-e
Q 013217 267 ------------------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGS---DN-H 323 (447)
Q Consensus 267 ------------------~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~---~~-~ 323 (447)
.|. + ..+..+.+|+...+..++++..++.+++++.+.+.|.+.++..+. +.. .+ +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~G~-n-~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~ 291 (379)
T PRK11658 214 DAFDRQTQGRAPQAEVLTPGY-K-YNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWH 291 (379)
T ss_pred chhhhhcccCCCcceeecccc-c-cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEE
Confidence 011 1 112334445555554567778888888899999999775543222 111 11 3
Q ss_pred eEEecCCC--CCCCHHHHHHHHhhcCeEEccCCCCCCCCCC-C---------------CCeEEEecCccccCCCCHHHHH
Q 013217 324 LVLVDLRP--MGIDGARVEKILDMASITLNKNSVPGDKSAL-V---------------PGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 324 ~~~v~~~~--~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~-~---------------~~~iRig~~~~~~~g~~~~di~ 385 (447)
.+.+.+.. .+.+.+++.+.|.++||.++..+.|.+..+. . ...+.+ | ++ .+|+++|++
T Consensus 292 ~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~l--P-~~-~~l~~~~~~ 367 (379)
T PRK11658 292 LFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSL--P-LF-PDMTDADVD 367 (379)
T ss_pred EEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEc--c-CC-CCCCHHHHH
Confidence 33333322 2457788999999999987755444432111 0 011222 2 12 467899999
Q ss_pred HHHHHHHHHH
Q 013217 386 AIADFIHEGV 395 (447)
Q Consensus 386 ~l~~~i~~~l 395 (447)
++++.|++++
T Consensus 368 ~i~~~i~~~~ 377 (379)
T PRK11658 368 RVITALQQIA 377 (379)
T ss_pred HHHHHHHHHH
Confidence 9999998865
No 64
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.94 E-value=5.9e-24 Score=190.10 Aligned_cols=334 Identities=17% Similarity=0.139 Sum_probs=238.8
Q ss_pred eeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHH
Q 013217 23 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 102 (447)
Q Consensus 23 i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~ 102 (447)
..|.|++..+|+.|++||.... .|+.. .++.+ +.+..++-++..|....+.- .+..+||+.++.++
T Consensus 19 ~L~gPGPsnl~~~V~~A~~~~~-----lgh~s------Pe~~q-Im~~v~egikyVFkT~n~~t--f~isgsGh~g~E~a 84 (385)
T KOG2862|consen 19 TLLGPGPSNLSGRVQEAMSRPS-----LGHMS------PEFVQ-IMDEVLEGIKYVFKTANAQT--FVISGSGHSGWEAA 84 (385)
T ss_pred eeecCCCcCCCHHHHHhhcCCc-----cccCC------HHHHH-HHHHHHHHHHHHhccCCCce--EEEecCCcchHHHH
Confidence 4788999999999999996432 33322 23332 33455678888998875532 46678999999999
Q ss_pred HHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC--CCC
Q 013217 103 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA--SAY 180 (447)
Q Consensus 103 ~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~--~~~ 180 (447)
+..++.|||+|++... |.+++.+. ...+..|..+++++ .+ .++...++++++.+.+|+|++|+++. ++.
T Consensus 85 l~N~lePgd~vLv~~~---G~wg~ra~---D~~~r~ga~V~~v~--~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsST 155 (385)
T KOG2862|consen 85 LVNLLEPGDNVLVVST---GTWGQRAA---DCARRYGAEVDVVE--AD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSST 155 (385)
T ss_pred HHhhcCCCCeEEEEEe---chHHHHHH---HHHHhhCceeeEEe--cC-cccCccHHHHHHHHHhcCCceEEEEecCccc
Confidence 9999999999998763 33333321 12244565445443 44 45689999999999999999998873 333
Q ss_pred CCCCC-hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHh
Q 013217 181 PRDFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 258 (447)
Q Consensus 181 ~~~~~-~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i 258 (447)
+-.+| ++.+.++|++|+++++||.+.+.|........+ ++|+..+..+|.|.+|.| +.|..++. ..+++
T Consensus 156 gV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew---gVDvaytgSQKaL~aP~GLsiisfS~k------a~~~~ 226 (385)
T KOG2862|consen 156 GVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW---GVDVAYTGSQKALGAPAGLSIISFSDK------ALEAI 226 (385)
T ss_pred cccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh---cccEEEecchhhcCCCCCcceeecCHH------HHHHH
Confidence 33677 688899999999999999998777554333333 489999999999999999 98887763 22222
Q ss_pred hh---------------ccCCC-------CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEee
Q 013217 259 NN---------------AVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 316 (447)
Q Consensus 259 ~~---------------~~~~~-------~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 316 (447)
+. ..+.+ +.-||....+.++.+||..+.++|.++.+++++++++++...|++.|++..
T Consensus 227 ~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~f 306 (385)
T KOG2862|consen 227 RDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLF 306 (385)
T ss_pred hhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccce
Confidence 21 11111 235677888899999999999999999999999999999999999998876
Q ss_pred eCCCC--Ce-eEEecCCCCCCCHHHHHHHHhh-cCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 317 SGGSD--NH-LVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 317 ~~~~~--~~-~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
...+. .. ...+.+ +.++|+.++...+.. +++.+..+ .++..+..+|||+...+. +.+-|+.+.++|+
T Consensus 307 v~~e~~rlptvttv~v-p~gvDw~dVv~~~~~~~~vei~gg-----lg~~~gKv~RIGl~gcna---~~e~i~~v~~ll~ 377 (385)
T KOG2862|consen 307 VVDEELRLPTVTTVKV-PYGVDWKDVVAYAMSHYVVEIGGG-----LGPTVGKVFRIGLLGCNA---NVEYIDNVVELLK 377 (385)
T ss_pred ecChhhccCcceeeec-CCCCCHHHHHHHHHHhcCEEeccc-----cCCCcccEEEEEEeeccC---CcHHHHHHHHHHH
Confidence 53211 11 112333 567899888877755 47777542 233456689999776654 4788888888888
Q ss_pred HHHHH
Q 013217 393 EGVEI 397 (447)
Q Consensus 393 ~~l~~ 397 (447)
.++..
T Consensus 378 ~alq~ 382 (385)
T KOG2862|consen 378 LALQR 382 (385)
T ss_pred HHHhh
Confidence 77754
No 65
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.94 E-value=1.2e-24 Score=214.72 Aligned_cols=321 Identities=17% Similarity=0.168 Sum_probs=209.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 110 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~pg 110 (447)
+++..++++...+.+.+ +........+| +.+++++|.+. .+.++||++|+..++.++ ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~---------~~~g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---------LTQGPTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC---------ccCChhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 45556777766665432 11123345666 57889999875 244578999999999998 8999
Q ss_pred CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---hCCcEEEEcCCCCCCCCChH
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPRDFDYP 187 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~~~klii~~~~~~~~~~~~~ 187 (447)
|+|+++++.|.+... .+...|. +++.++++++++.+|++++++++++ .+|++|+++.. ++...|++
T Consensus 70 d~Viv~~~~~~~~~~--------~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~~-~G~~~~~~ 138 (380)
T TIGR03588 70 DRVWTTPITFVATAN--------CALYCGA--KVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF-AGKSVDMQ 138 (380)
T ss_pred CEEEeCCcchHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeCC-CCccCCHH
Confidence 999999987765421 2334454 6666667766788999999999982 27898887532 34478999
Q ss_pred HHHHHHHHhCCEEEEehhhhccccccccCCCC-CCcccEEEeCCC--cccCCCCCceEEeecCCcchhhHHHHhhhccCC
Q 013217 188 RMRQIADAVGALLMMDMAHISGLVAASVVADP-FKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFP 264 (447)
Q Consensus 188 ~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~-~~~~Di~~~s~~--K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~ 264 (447)
+|.++|+++|+++|+|++|+.|....+ .+.. ....|+.++|+| |+++++.||+++++++ ++.+++......
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~-~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-----~~~~~~~~~~~~ 212 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEYGG-KPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE-----ELAERMRLLRSH 212 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCccCC-EeCCCccccceEEEecCCCCcccccCceEEEECCH-----HHHHHHHHHHHC
Confidence 999999999999999999998865433 1111 114599999998 8898889999998775 565554431111
Q ss_pred CC---------------------CC-CCcHHHH-HHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC-
Q 013217 265 GL---------------------QG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG- 319 (447)
Q Consensus 265 ~~---------------------~g-~p~~~~~-aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~- 319 (447)
+. .| ...+..+ +++ ++.++ ..+++..++..++++++.+.|.+. ++.+....
T Consensus 213 g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~--g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~ 288 (380)
T TIGR03588 213 GITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAAL--GLSQL--KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPL 288 (380)
T ss_pred CCCCCcccccccccCcceeeeeccccccCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCC
Confidence 10 01 0111112 122 22222 236777888899999999999874 34433221
Q ss_pred -C--CCeeEEecCCC-CCCCHHHHHHHHhhcCeEEccCCCCCCCCC----------C------CCCeEEEecCccccCCC
Q 013217 320 -S--DNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSA----------L------VPGGIRIGSPAMTTRGF 379 (447)
Q Consensus 320 -~--~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~----------~------~~~~iRig~~~~~~~g~ 379 (447)
. ..+...+.+.. .+.+.+++.+.|.+.||.++..+.|.+..+ + ....|++.++...
T Consensus 289 ~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l---- 364 (380)
T TIGR03588 289 GSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPAL---- 364 (380)
T ss_pred CCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCC----
Confidence 1 12333333332 345788999999999999886554533110 0 1134777655444
Q ss_pred CHHHHHHHHHHHHHHH
Q 013217 380 SEKEFVAIADFIHEGV 395 (447)
Q Consensus 380 ~~~di~~l~~~i~~~l 395 (447)
+++||+++++.|++++
T Consensus 365 ~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 365 TLEQQQRVVETLRKVL 380 (380)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 4999999999998764
No 66
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.94 E-value=5.5e-24 Score=210.76 Aligned_cols=331 Identities=17% Similarity=0.184 Sum_probs=218.2
Q ss_pred hcCeeEecCCC--C-CCHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc
Q 013217 20 FKSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n--~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG 95 (447)
+..|+|..+++ + .+|.|++++...+.. |..+++..+...+ ....+ ..++++++++|.+. .+.+++|
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~----~l~~~la~~~~~~~-----~i~~~~g 108 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARR-YGAGSGGSRLVTGNSPAHE----ALEEELAEWFGAER-----ALLFSSG 108 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcccCCcHHHH----HHHHHHHHHhCCCc-----EEEECcH
Confidence 45688877765 3 468999999888754 4434433332222 22233 34468888888532 3455888
Q ss_pred HHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEE
Q 013217 96 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLI 173 (447)
Q Consensus 96 s~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~kli 173 (447)
++++..++.++++|||+|++.++.|+++.. .+...|. +++.++ ..|++++++++++. ++.++
T Consensus 109 ~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~i~~~~~~~~lv 172 (385)
T PRK05958 109 YAANLAVLTALAGKGDLIVSDKLNHASLID--------GARLSRA--RVRRYP------HNDVDALEALLAKWRAGRALI 172 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhccCCCeEE
Confidence 888888888889999999999988876542 2233443 333322 24889999988763 24556
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccccc-cc-CCC--CCC--cccEEEeCCCcccCCCCCceEEee
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PFK--YCDVVTTTTHKSLRGPRGGMIFFK 245 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~-~~-~~~--~~~--~~Di~~~s~~K~l~Gp~gG~i~~~ 245 (447)
++++..+++ ..++++|.++|+++|+++|+|++|+.|.... +. ... .+. ..++++.|+||++ |+.||+++.+
T Consensus 173 i~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~ 251 (385)
T PRK05958 173 VTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGS 251 (385)
T ss_pred EEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcC
Confidence 655444433 6789999999999999999999997665431 11 000 111 2348889999998 5677888887
Q ss_pred cCCcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee
Q 013217 246 KDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 324 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 324 (447)
+ ++.+.+.....+.. .++++...+++...+++..... .+..+++.++++++.+.|++.|+++..+ ...+
T Consensus 252 ~------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~ 321 (385)
T PRK05958 252 E------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMDS--QSAI 321 (385)
T ss_pred H------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCE
Confidence 6 66666543322222 2344555666666677765432 4567888899999999999888876543 3445
Q ss_pred EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 325 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+++.+.. ..+..++.+.|.++||.+.....+.. +.....+|++++..++ ++|++++++.|+++
T Consensus 322 ~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~lRis~~~~~~----~~~i~~~l~~l~~~ 384 (385)
T PRK05958 322 QPLIVGD-NERALALAAALQEQGFWVGAIRPPTV--PAGTSRLRITLTAAHT----EADIDRLLEALAEA 384 (385)
T ss_pred EEEEeCC-HHHHHHHHHHHHHCCceEecccCCCC--CCCCceEEEEecCCCC----HHHHHHHHHHHHhc
Confidence 5665532 23456788888889999965322211 1123589999987777 99999999998765
No 67
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=8e-24 Score=210.33 Aligned_cols=337 Identities=14% Similarity=0.101 Sum_probs=218.8
Q ss_pred cCeeEecCC-C--CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--C-CccceeeecCC
Q 013217 21 KSLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--E-NKWGVNVQPLS 94 (447)
Q Consensus 21 ~~i~l~~~~-n--~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~-~~~~~~v~~~s 94 (447)
..++|..+. + ..++.+.+++.+.+.+....+|+.. .| ...+.+.+.+++++.+|.+ + + +|.+++
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~---~G---~~~LR~aia~~l~~~~g~~~~~~~----~I~it~ 109 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEY---RG---DADIRELLAARLAAFTGAPVDAAD----ELIITP 109 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCC---CC---CHHHHHHHHHHHHHHhCCCCCCCC----CEEEeC
Confidence 446776433 3 2567888888776654222344432 11 2345555667888888864 3 3 344577
Q ss_pred cH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccC---C-CCCCCCHHHHHHHhhhhC
Q 013217 95 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---E-STGLVDYDMLEKTAILFR 169 (447)
Q Consensus 95 Gs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~-~~~~id~~~l~~~~~~~~ 169 (447)
|+ +++..++.++++|||+|++.+|.|+++.. .+...|. ++++++++ + +++.+|+++|++++++ +
T Consensus 110 Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~ 178 (405)
T PRK06207 110 GTQGALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEG--EMVPVQLDYLSADKRAGLDLDQLEEAFKA-G 178 (405)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEeccccCcccCCCcCHHHHHHhhhh-c
Confidence 76 89999999999999999999998876531 2334454 44444443 1 2468999999999877 7
Q ss_pred CcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---C---cccEEEeCCCccc--CC
Q 013217 170 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTHKSL--RG 236 (447)
Q Consensus 170 ~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~---~~Di~~~s~~K~l--~G 236 (447)
+++|+++.|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+....++ . ..-+++.|++|++ +|
T Consensus 179 ~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpG 257 (405)
T PRK06207 179 VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLY-SRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSG 257 (405)
T ss_pred CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cccccCCCCCCchhcCCCCcCcEEEEecchhhccCcc
Confidence 9999898888886 554 678888999999999999995 4444332111111 1 1227889999997 58
Q ss_pred CCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEe
Q 013217 237 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 315 (447)
Q Consensus 237 p~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 315 (447)
.|.||++.++ ++.+++.........+.+. ....++..+++.- ...+++..+++.++++.+.+.|++. |+++
T Consensus 258 lRiG~ii~~~------~l~~~~~~~~~~~~~~~~~-~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 329 (405)
T PRK06207 258 YRLGVAFGSP------AIIDRMEKLQAIVSLRAAG-YSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFV 329 (405)
T ss_pred cceEEEEcCH------HHHHHHHHHHhHhccCCCH-HHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 8999999887 6777665533222222222 2233333344321 1224666777778888888888774 7766
Q ss_pred eeCCCCCeeEEecCCCCCCCHHHHHHHHh-hcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 316 VSGGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 316 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
..+ ....++|++++..+++..++.+.|. ++||.+..+...+ +..++++||++.. + ++++++..+.|.++
T Consensus 330 ~~p-~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~---~~~~~~~Ris~~~--~----~~~l~~al~rl~~~ 399 (405)
T PRK06207 330 RAP-QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFS---PHTADSIRLNFSQ--D----HAAAVAAAERIAQL 399 (405)
T ss_pred cCC-CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhC---CCCCCeEEEEecC--C----HHHHHHHHHHHHHH
Confidence 543 3456778888653456677777774 7899996432211 1124689999763 3 67888877777777
Q ss_pred HHH
Q 013217 395 VEI 397 (447)
Q Consensus 395 l~~ 397 (447)
++.
T Consensus 400 l~~ 402 (405)
T PRK06207 400 IER 402 (405)
T ss_pred HHH
Confidence 654
No 68
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.94 E-value=1.1e-23 Score=208.14 Aligned_cols=340 Identities=11% Similarity=0.032 Sum_probs=225.7
Q ss_pred CCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC-C-CccceeeecCCcHHHHHHHHHHh
Q 013217 29 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-E-NKWGVNVQPLSGSPANFEVYTAI 106 (447)
Q Consensus 29 ~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~-~-~~~~~~v~~~sGs~a~~~~~~al 106 (447)
.+++.|.+.+.+.+.++..+ ++|.. .+. . .++|+.+++++++++|++ + +++++ +.+++||+||..++.+.
T Consensus 50 tt~~~p~~~~~~~~~l~~~~--~np~s---~~~-~-~~le~~~~~~la~llg~~~~~~~~~g-~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNM--IDKDE---YPQ-T-AEIENRCVNMLADLWHAPAKDAEAVG-TSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCC--CCccc---Ccc-H-HHHHHHHHHHHHHHhCCCCCCCCCeE-EEechHHHHHHHHHHHH
Confidence 45667889999988886432 45543 222 2 378889999999999998 3 34433 22356679998877654
Q ss_pred c--------CCC-----CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 013217 107 L--------KPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 107 ~--------~pg-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~kli 173 (447)
. +.| -+|++++.+|.+.. +.+...|. ++..++++++++.+|+++|++++++ +|.+|
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~--------ka~~~lg~--~v~~i~~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWE--------KFARYFDV--ELREVPMDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHH--------HHHHHcCc--eeEEEecCCCceeeCHHHHHHHHhh-CCeEE
Confidence 2 112 36888877776543 12334453 4555557754468999999999987 78888
Q ss_pred EEcCCC-CCC-CCChHHHHHHHHHh------CCEEEEehhhhcccccccc--CCCC--CCcccEEEeCCCcccCCCCC-c
Q 013217 174 IAGASA-YPR-DFDYPRMRQIADAV------GALLMMDMAHISGLVAASV--VADP--FKYCDVVTTTTHKSLRGPRG-G 240 (447)
Q Consensus 174 i~~~~~-~~~-~~~~~~i~~ia~~~------g~~livD~a~~~g~~~~~~--~~~~--~~~~Di~~~s~~K~l~Gp~g-G 240 (447)
+++..+ ..+ ..|+++|+++|+++ |+|+++|++|+.+..+... .+.. ..++|.+++|+|||+.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 887433 333 88999999999999 9999999999755432211 1111 23689999999999889999 9
Q ss_pred eEEeecCCcchhhHHHHhhhc--cC------CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-
Q 013217 241 MIFFKKDPVLGVELESAINNA--VF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL- 311 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~--~~------~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 311 (447)
+++++++. .+.+.+... .. .+..++......++++..++.+...++.+..++..+++++|.+.|.+.
T Consensus 271 ~l~~r~~~----~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~ 346 (431)
T TIGR01788 271 WVIWRDEE----ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLG 346 (431)
T ss_pred EEEEeChH----HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998741 121222110 00 112233333344456777777777789999999999999999999884
Q ss_pred CcEeeeCCCCCeeEEecCCC---CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHH
Q 013217 312 GYKLVSGGSDNHLVLVDLRP---MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 388 (447)
Q Consensus 312 g~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~ 388 (447)
+++++.+.....++.+.+.+ .+++..++.+.|.+.|+.+.....|... .....+|+.+....+ .+.++.++
T Consensus 347 ~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~--~~~~~lR~~~~~~~~----~~~~~~~~ 420 (431)
T TIGR01788 347 PFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNA--EDIVVMRIVVREGFS----RDLAELLI 420 (431)
T ss_pred CEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCcc--CCeEEEEEEecCCCC----HHHHHHHH
Confidence 58888642233333333332 1356678999999999987543333211 012358998765555 78888888
Q ss_pred HHHHHHHHH
Q 013217 389 DFIHEGVEI 397 (447)
Q Consensus 389 ~~i~~~l~~ 397 (447)
+.|.+++..
T Consensus 421 ~~~~~~~~~ 429 (431)
T TIGR01788 421 EDIEAALAY 429 (431)
T ss_pred HHHHHHHHh
Confidence 888877653
No 69
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=7e-24 Score=209.54 Aligned_cols=345 Identities=15% Similarity=0.168 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHhhcCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--C
Q 013217 8 VCEIITKEKERQFKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--E 83 (447)
Q Consensus 8 ~~~~~~~e~~~~~~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~ 83 (447)
+...+... ..+...|+|..+++.. ++.+.+++...+.... .+|+. .+....+.+.+++++++++|++ +
T Consensus 18 ~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~l~~~~g~~~~~ 89 (384)
T PRK12414 18 IFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAP------MAGIAALREALAEKTERLYGARYDP 89 (384)
T ss_pred HHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCcCC------CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 44444332 3455678988777744 7788888877654321 22322 2223455556667888899985 2
Q ss_pred CccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHH
Q 013217 84 NKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE 162 (447)
Q Consensus 84 ~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 162 (447)
.+ +|..++|+ +++..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++++.+|+++++
T Consensus 90 ~~---~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~ 156 (384)
T PRK12414 90 AS---EVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP--------IVRLQGA--TPVAIKLSPEDFRVNWDEVA 156 (384)
T ss_pred CC---cEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHcCC--EEEEEecCccccccCHHHHH
Confidence 11 23346665 89999999999999999999998765421 2234454 55566666556789999999
Q ss_pred HHhhhhCCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---C---cccEEEeCCC
Q 013217 163 KTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTH 231 (447)
Q Consensus 163 ~~~~~~~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~---~~Di~~~s~~ 231 (447)
+.+++ ++++|+++.++||+ .. ++++|.++|+++|+++++|+++. .+.+.+....++ + ...+++.|++
T Consensus 157 ~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfS 234 (384)
T PRK12414 157 AAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAERSVIVSSFG 234 (384)
T ss_pred hhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCcEEEEeccc
Confidence 99876 89999998888886 32 57889999999999999999964 333322111111 1 1248899999
Q ss_pred ccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH
Q 013217 232 KSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 309 (447)
Q Consensus 232 K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 309 (447)
|.+ +|.|.||+++++ ++.+.+.........+.+...+ .++..+++. ...+.+..+.+.++++.+.+.|+
T Consensus 235 K~~~~pGlRiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~q-~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~ 305 (384)
T PRK12414 235 KSYHVTGWRVGYCLAPA------ELMDEIRKVHQFMVFSADTPMQ-HAFAEALAE--PASYLGLGAFYQRKRDLLARELA 305 (384)
T ss_pred ccccCccceEEEEecCH------HHHHHHHHHHhheecCCCcHHH-HHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHH
Confidence 987 678889999987 6666665533211122222222 233333332 12234556777888899999999
Q ss_pred HCCcEeeeCCCCCeeEEecCCCC-C-CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 310 ELGYKLVSGGSDNHLVLVDLRPM-G-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 310 ~~g~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
+.|+.+..+ ..+.++|+++... . .+.+.+.+.|.++||.+..+...+. .....+++||++.. + ++++++.
T Consensus 306 ~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~-~~~~~~~iRis~~~--~----~~~~~~~ 377 (384)
T PRK12414 306 GSRFELLPS-EGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYT-DGTDTGLIRLSFSK--D----DATLVEG 377 (384)
T ss_pred hCCCeecCC-CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcC-CCCCCCEEEEEecC--C----HHHHHHH
Confidence 888876543 3466677777542 2 2344555778889999954321111 11124589999762 3 6777666
Q ss_pred HHHHH
Q 013217 388 ADFIH 392 (447)
Q Consensus 388 ~~~i~ 392 (447)
.+.|.
T Consensus 378 ~~rl~ 382 (384)
T PRK12414 378 ARRLC 382 (384)
T ss_pred HHHHh
Confidence 66554
No 70
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=211.80 Aligned_cols=333 Identities=13% Similarity=0.076 Sum_probs=224.9
Q ss_pred CeeEecCCCCCCHHHHHHHhhhhhccCCC--CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHH
Q 013217 22 SLELIASENFTSRAVMEAVGSCLTNKYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 99 (447)
Q Consensus 22 ~i~l~~~~n~~~~~v~~a~~~~~~~~~~~--g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~ 99 (447)
.+.|+|++..+|+.|+++|...+.+.... |.+.. .+...++.+.++ .++++++++||++.+.. +.+...||+.++
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~-~hr~~~f~~~~~-~~~~~l~~l~~~~~~~~-v~~~~gsgt~~~ 80 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEI-SHRSKEFEAVAE-EAEADLRELLNIPDNYK-VLFLQGGASLQF 80 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCcccccc-CCCCHHHHHHHH-HHHHHHHHHhCCCCCcE-EEEEcCCchHHH
Confidence 46789999999999999999876431111 11111 123445555554 67889999999843322 345567788999
Q ss_pred HHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHH-HhhhhCCcEEEEcCC
Q 013217 100 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLIIAGAS 178 (447)
Q Consensus 100 ~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~-~~~~~~~klii~~~~ 178 (447)
.+++.+++.+||++++...- .+++.+. ..++..|.. .++. .++..+..+..++++ .+++ ++++|.+++.
T Consensus 81 Ea~~~nl~~~g~~~l~i~~G---~fg~r~~---~~a~~~g~~-~~~~--~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~ 150 (360)
T PRK05355 81 AMVPMNLLGGGKKADYVDTG---SWSKKAI---KEAKKYGEV-NVAA--SSEDDGFTYIPPLDEWQLSD-DAAYVHYTSN 150 (360)
T ss_pred HHHHHhcCCCCCeEEEEECC---HHHHHHH---HHHHHhCCc-eEEe--cccccCCCCCCChhhccCCC-CCCEEEEccC
Confidence 99999999999999987633 3333321 122334431 2222 332234455555544 6666 7999998854
Q ss_pred CCCC--CC-ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhH
Q 013217 179 AYPR--DF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 254 (447)
Q Consensus 179 ~~~~--~~-~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~ 254 (447)
.+++ .. |+++| +|+++++|++|++|....++. ..|++++|.||+| ||.| |++++++ +.
T Consensus 151 eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~-----~~d~~~~ssqK~l-gP~Glg~l~~s~------~~ 212 (360)
T PRK05355 151 ETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVS-----KFGLIYAGAQKNI-GPAGLTIVIVRE------DL 212 (360)
T ss_pred CCcceEecCccccc------CCCcEEEEcCccccCccCCHH-----HccEEEEeccccc-cCCceEEEEECH------HH
Confidence 4443 44 66655 899999999999987654432 3579999999987 6999 9999998 44
Q ss_pred HHHhhhc-----------cCCCCCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHCCcE-eeeC-CC
Q 013217 255 ESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYK-LVSG-GS 320 (447)
Q Consensus 255 ~~~i~~~-----------~~~~~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~-~~ 320 (447)
.+++.+. ......+||+.+.+.++..+++++... +++.+.++..+.++++.+.|++.|+. .+.. ..
T Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~ 292 (360)
T PRK05355 213 LGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPED 292 (360)
T ss_pred HhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhh
Confidence 4443321 111235899999999999999999888 79999999999999999999997752 2221 11
Q ss_pred CC-eeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 321 DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 321 ~~-~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+ ....+.+.. +....++...+.++||.+.. +.. ..+.+|+|+..+++ .+|++++.++|++++.+
T Consensus 293 rs~~v~sf~~~~-~~~~~~~~~~~~~~Gi~~~~----~~~---~~g~vRiS~~~~nt----~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 293 RSRMNVPFTLAD-EELDKKFLAEAKAAGLVGLK----GHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFERR 358 (360)
T ss_pred cCCcEEEEEcCC-hHHHHHHHHHHHHCCCcccC----CCC---ccCcEEEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence 12 222333322 22334565677789998732 221 23579999999998 99999999999997753
No 71
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.94 E-value=1.4e-23 Score=212.07 Aligned_cols=330 Identities=17% Similarity=0.162 Sum_probs=214.2
Q ss_pred CCCCHHHHHHHhhhhhccCCCCCCCCcccC--chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHH---HH
Q 013217 30 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYG--GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV---YT 104 (447)
Q Consensus 30 n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~--g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~---~~ 104 (447)
..+||.+.+++.+.- .|. +|. .|.. -.+...++....++++++++|++. +.+..++|+.+.... +.
T Consensus 80 ~~~~p~i~~~~~~~~--~~~-~~t--pYq~e~~sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~~r 150 (481)
T PRK04366 80 MKYNPKINEKVARLP--GFA-ELH--PLQPEETVQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLMIR 150 (481)
T ss_pred CCCCHHHHHHHHhCc--chh-cCC--CCCChhhhhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHHHH
Confidence 356888888876531 111 221 1111 122233445567789999999985 356667777554432 22
Q ss_pred -HhcCCCC----EEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 013217 105 -AILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 179 (447)
Q Consensus 105 -al~~pgd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~ 179 (447)
.++++|| +|+++++.|+++.. .+...|. +++.++++ .++.+|+++|++++++ ++++|+++.|+
T Consensus 151 ~~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~--~vv~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~Pn 218 (481)
T PRK04366 151 AYHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGF--KVVEIPSN-EDGLVDLEALKAAVGE-DTAALMLTNPN 218 (481)
T ss_pred HHhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHhhccc-CCeEEEEeCCC
Confidence 3467777 99999998877643 2234454 55555565 4578999999999987 89998888777
Q ss_pred CCCC--CChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCCcccCCCCC------ceEEeecCCcc
Q 013217 180 YPRD--FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVL 250 (447)
Q Consensus 180 ~~~~--~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~g------G~i~~~~~~~~ 250 (447)
..+. .|+++|+++|+++|+++++|++|..+++.. . .|-. ++|++++++||||++|.| |++++++
T Consensus 219 ~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~--~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~---- 291 (481)
T PRK04366 219 TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGK--A-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE---- 291 (481)
T ss_pred CccccchHHHHHHHHHHHcCCEEEEEecChhhhccc--C-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehh----
Confidence 5453 479999999999999999999997664321 1 1222 699999999999875542 6888887
Q ss_pred hhhHHHHhhhcc---------C----C-----CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC
Q 013217 251 GVELESAINNAV---------F----P-----GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 312 (447)
Q Consensus 251 ~~~~~~~i~~~~---------~----~-----~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 312 (447)
++.+.+.... . + ...++.+...+.+.+..+..+..+++++..++..+++++|+++|.+.
T Consensus 292 --~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~- 368 (481)
T PRK04366 292 --ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI- 368 (481)
T ss_pred --hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-
Confidence 3443331100 0 0 00112222222233333444455567787888899999999999885
Q ss_pred cEeeeCCCCCeeEEecCC---CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHH
Q 013217 313 YKLVSGGSDNHLVLVDLR---PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 389 (447)
Q Consensus 313 ~~~~~~~~~~~~~~v~~~---~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~ 389 (447)
+++.......+.++++.. ..+.+..++.+.|.++||.+.....|. ...+.+|++++.++| ++|++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t----~edid~l~~ 440 (481)
T PRK04366 369 YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETES----KETLDAFIA 440 (481)
T ss_pred CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCC----HHHHHHHHH
Confidence 444332222244555532 234567889999999999875322221 124589999999998 999999999
Q ss_pred HHHHHHHHH
Q 013217 390 FIHEGVEIT 398 (447)
Q Consensus 390 ~i~~~l~~~ 398 (447)
+|.++....
T Consensus 441 ~l~~i~~~~ 449 (481)
T PRK04366 441 AMKQIAEEA 449 (481)
T ss_pred HHHHHHHHH
Confidence 999887654
No 72
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.94 E-value=1.3e-24 Score=213.82 Aligned_cols=326 Identities=13% Similarity=0.075 Sum_probs=216.7
Q ss_pred CeeEecCCCCCCHH-HHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCC-CccceeeecCCcHHHH
Q 013217 22 SLELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPAN 99 (447)
Q Consensus 22 ~i~l~~~~n~~~~~-v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~-~~~~~~v~~~sGs~a~ 99 (447)
.+.|+++...+++. |++++...+.. .. +.+.++.+.++ .+++.+++++|++. .++ .+...|||.++
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~-----~~----hr~~~f~~~~~-~~r~~l~~l~~~~~~~~v--~~~~gs~T~~~ 80 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALLG-----RS----HRQKPVKALLK-RVIEGTRELLSLPEGYEV--GIVPGSDTGAW 80 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhcc-----cC----cCCHHHHHHHH-HHHHHHHHHhCCCCCceE--EEECCchHHHH
Confidence 46788889988888 99999754321 11 12335555554 78899999999853 232 22234788999
Q ss_pred HHHHHHhcCC-CCEEEEecCCCCcccCCCccccccccccccc-eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 100 FEVYTAILKP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 100 ~~~~~al~~p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
.+++.+++++ ++.|++ +.+|++.+... ..+..|. .++.++ .+ +++.+|+++++ . +++|.+++
T Consensus 81 ~~~~~~l~~~~~~~vi~-~g~f~~~~~~~------~~~~~g~~~v~~~~--~~-~g~~~d~~~i~----~--~~~V~~~h 144 (378)
T PRK03080 81 EMALWSLLGARRVDHLA-WESFGSKWATD------VVKQLKLEDPRVLE--AD-YGSLPDLSAVD----F--DRDVVFTW 144 (378)
T ss_pred HHHHHhcCCCCcceEEE-eCHHHHHHHHH------HHhhcCCCCceEec--cC-CCCCCCHhhcC----C--CCCEEEEe
Confidence 9999999875 455554 44555432100 0012243 334333 43 45678888743 2 56677764
Q ss_pred CC-CCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhH
Q 013217 178 SA-YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 254 (447)
Q Consensus 178 ~~-~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~ 254 (447)
.. ..+ ..|+++|++ +++|+++++|++|+.|.++.++. .+|++++|+||||+||.| |++++++ +.
T Consensus 145 ~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-----~iD~~~~s~~K~l~~P~G~g~l~v~~------~~ 211 (378)
T PRK03080 145 NGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-----KLDVYTFSWQKVLGGEGGHGMAILSP------RA 211 (378)
T ss_pred cCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-----HCcEEEEehhhhCCCCCceEEEEECH------HH
Confidence 33 333 889999999 88999999999999998765543 379999999999999999 9999998 44
Q ss_pred HHHhhhc----------------------cCCCCCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHC
Q 013217 255 ESAINNA----------------------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 255 ~~~i~~~----------------------~~~~~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 311 (447)
.+++... ...++.++|+...+.++..+++.+.+. +++...++..+.++++.+.|.+.
T Consensus 212 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~ 291 (378)
T PRK03080 212 VERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKT 291 (378)
T ss_pred HHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4433321 011233567777777888899999876 78888999999999999999886
Q ss_pred C-cEeeeC-CC-CC-eeEEecCCCC--CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHH
Q 013217 312 G-YKLVSG-GS-DN-HLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 312 g-~~~~~~-~~-~~-~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~ 385 (447)
+ +.++.. .. .+ .++.+.+... +.+. ++...|.+.||.+..+... . ..+.+|+|++.+++ ++|++
T Consensus 292 ~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~-~~~~~l~~~~i~v~~g~~~----~-~~~~vRis~~~~~t----~~di~ 361 (378)
T PRK03080 292 PWATPLVADPATRSNTSVTLDFVDAQAAVDA-AAVAKLLRENGAVDIEPYR----D-APNGLRIWCGPTVE----PADVE 361 (378)
T ss_pred CCcccccCCccccCccEEEEEcCCchHHHHH-HHHHHHHHcCCeecccccc----C-CCCcEEEecCCCCC----HHHHH
Confidence 5 565532 11 12 2233333220 1233 3445555668887543111 1 24589999999998 99999
Q ss_pred HHHHHHHHHHHHH
Q 013217 386 AIADFIHEGVEIT 398 (447)
Q Consensus 386 ~l~~~i~~~l~~~ 398 (447)
+++++|++++...
T Consensus 362 ~l~~al~~~~~~~ 374 (378)
T PRK03080 362 ALTPWLDWAFERL 374 (378)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987643
No 73
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.2e-23 Score=208.53 Aligned_cols=337 Identities=15% Similarity=0.170 Sum_probs=216.6
Q ss_pred hcCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCc
Q 013217 20 FKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sG 95 (447)
.+.++|..+++.. ++.+++++...+...+ .+|. .......+++...+++.+.+|. +++ +|.+++|
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G 101 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGW-THYT------PNAGIPELREAIAEYYKKFYGVDVDVD----NVIVTAG 101 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCC------CCCCcHHHHHHHHHHHHHHhCCCCCcc----cEEEeCC
Confidence 4568888777753 5778888877654421 1221 1122345665555666666664 344 3444676
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|.++.. .+...|. ++++++++++ ++.+|++++++.+++ ++++|
T Consensus 102 ~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v 170 (391)
T PRK08361 102 AYEATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEA--KPIRIPLREENEFQPDPDELLELITK-RTRMI 170 (391)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCC--EEEEEecCCccCCCCCHHHHHHhccc-ccEEE
Confidence 5 89998999999999999999998766532 2334454 5556666643 467999999999987 78999
Q ss_pred EEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC----CcccEEEeCCCccc--CCCCCceE
Q 013217 174 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KYCDVVTTTTHKSL--RGPRGGMI 242 (447)
Q Consensus 174 i~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~----~~~Di~~~s~~K~l--~Gp~gG~i 242 (447)
+++.++||+ ..+ +++|.++|+++++++++|+++. .+...+....++ ...++++.|++|++ +|.|.|++
T Consensus 171 ~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~ 249 (391)
T PRK08361 171 VINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE-HFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFV 249 (391)
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc-cceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhh
Confidence 888788876 667 7888999999999999999963 333222111111 12468899999987 45667999
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcC-hhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCC
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 320 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 320 (447)
++++ ++.+.+........ ++.+.....++..+++.-.. ...++..+++.++++.+.+.|++. |+.+..+ .
T Consensus 250 ~~~~------~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p-~ 321 (391)
T PRK08361 250 IAPE------QVIKDMIKLHAYII-GNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP-K 321 (391)
T ss_pred ccCH------HHHHHHHHHHhhhc-cCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC-C
Confidence 9987 56665544321111 12222222222334432111 124566777788888889999874 7765543 3
Q ss_pred CCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.+.++|+.+.+.+++..++.+.| +++||.+..+... .....+++|+++.. + +++++...+.|.++++
T Consensus 322 g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f---~~~~~~~iRi~~~~--~----~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 322 GAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAF---GKAGEGYIRISYAT--S----KEKLIEAMERMEKALE 389 (391)
T ss_pred EEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhh---CCCCCCEEEEEecC--C----HHHHHHHHHHHHHHHh
Confidence 45667888865456777787766 5689999643211 11234689999752 3 6677777777776654
No 74
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.2e-23 Score=205.23 Aligned_cols=339 Identities=14% Similarity=0.074 Sum_probs=218.3
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCC-ccceeeecCCcH
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGS 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~-~~~~~v~~~sGs 96 (447)
.+.+.|-.+++. .++.+.+++...+.+.-..+|+. ......+.+..++++++.+|.+.+ . .+|.+++|+
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~------~~G~~~lr~~~~~~l~~~~g~~~~~~--~~i~~t~G~ 98 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA------VQGIPPLLEAITQKLQQDNGIELNNE--QAIVVTAGS 98 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCC--CeEEEeCCh
Confidence 455788776663 67889999887664321112322 122234445566788888887421 1 134457777
Q ss_pred -HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 013217 97 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 175 (447)
Q Consensus 97 -~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~ 175 (447)
+++..++.++++|||+|++.+|.|..+.. .+...|. +++.++.+ +++.+|++++++++++ ++|+|++
T Consensus 99 ~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~klv~~ 166 (389)
T PRK05957 99 NMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGC--QPILVPTD-DNYQLQPEAIEQAITP-KTRAIVT 166 (389)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEeecC-CCCCcCHHHHHHhcCc-CceEEEE
Confidence 88888888899999999999988766532 1233454 55555555 4568999999999976 8999999
Q ss_pred cCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCC---C--cccEEEeCCCccc--CCCCCceE
Q 013217 176 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---K--YCDVVTTTTHKSL--RGPRGGMI 242 (447)
Q Consensus 176 ~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~---~--~~Di~~~s~~K~l--~Gp~gG~i 242 (447)
++++||+ ..+ +++|.++|+++|+++++|+++ ..+.+.+. ...+. + ...+++.|++|.+ +|.|.|++
T Consensus 167 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 245 (389)
T PRK05957 167 ISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAY-EYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYM 245 (389)
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccc-hhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEE
Confidence 8888876 555 889999999999999999985 34443321 11111 1 1347889999987 57778999
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-Cc-EeeeCCC
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GY-KLVSGGS 320 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~ 320 (447)
++++ ++.+++.........+.+...+.++ ..+++.- ...+++..+++.++++.+.+.|++. ++ .+. +..
T Consensus 246 ~~~~------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~ 316 (389)
T PRK05957 246 VIPI------HLLEAIKKIQDTILICPPVVSQYAA-LGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLH-PAN 316 (389)
T ss_pred ecCH------HHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-CCC
Confidence 9987 6777776543322223333333322 2234321 1224666777888888899999874 43 333 223
Q ss_pred CCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+.++|+.+.. +++..++.+.| +++||.+..+... .....+++|+++...+ ++++++..+.|.+.++.
T Consensus 317 gg~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f---~~~~~~~iRis~~~~~-----~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 317 GAFYCFLKVNT-DLNDFELVKQLIREYRVAVIPGTTF---GMKNGCYLRIAYGALQ-----KATAKEGIERLVQGLKT 385 (389)
T ss_pred eeEEEEEeCCC-CCChHHHHHHHHHHCCEEEccchhh---CCCCCCEEEEEEecCC-----HHHHHHHHHHHHHHHHh
Confidence 35667888743 56777777776 5689999543211 1112458999975433 67777777777666653
No 75
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.5e-23 Score=204.77 Aligned_cols=336 Identities=16% Similarity=0.077 Sum_probs=222.7
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC---CCccceeeecCCc
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD---ENKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~---~~~~~~~v~~~sG 95 (447)
..++|..+++. .++.+.+++...+...-..+||. .....+.+.+.+++.+.+|.+ +++ +|.+|+|
T Consensus 45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~-------~G~~~lr~aia~~~~~~~g~~~~~~~~---~I~it~G 114 (410)
T PRK06290 45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD-------NGIQEFKEAAARYMEKVFGVKDIDPVT---EVIHSIG 114 (410)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-------CCcHHHHHHHHHHHHHHcCCCcCCCcc---eEEEccC
Confidence 45888888875 46778888766543211123332 112455555566777766754 431 3556999
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|++++++.+.+ ++|+|
T Consensus 115 s~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i 183 (410)
T PRK06290 115 SKPALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGG--EVYNLPLLEENNFLPDLDSIPKDIKE-KAKLL 183 (410)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCC--EEEEEecCCCcCCcCCHHHHHHhhcc-cceEE
Confidence 8 88888999999999999999998766432 2234454 6666667643 467899999988876 89999
Q ss_pred EEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC--CC---cccEEEeCCCccc--CCCCCce
Q 013217 174 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGM 241 (447)
Q Consensus 174 i~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~--~~---~~Di~~~s~~K~l--~Gp~gG~ 241 (447)
+++.|+||+ ..+ +++|.++|+++|++|++|+++. .+.+.+...+. +. ..++++.|++|.+ +|.|.||
T Consensus 184 ~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 184 YLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEe
Confidence 999888886 555 5788888999999999999964 33333211111 11 2458999999987 6788899
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
++.++ ++.+.+.........+++...+. +...++.. ....++..+++.++++.+.+.|++.|+.+..+ ..
T Consensus 263 ii~~~------~l~~~l~~~~~~~~~~~~~~~q~-aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~g 332 (410)
T PRK06290 263 VVGNE------LIVKAFATVKDNNDSGQFIAIQK-AGIYALDH--PEITEKIREKYSRRLDKLVKILNEVGFKAEMP-GG 332 (410)
T ss_pred EEeCH------HHHHHHHHHHhccccCCcHHHHH-HHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-Ce
Confidence 99887 67776665443332333222222 22334432 12245667788888999999999888876543 34
Q ss_pred CeeEEecCCCCC------CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMG------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 322 ~~~~~v~~~~~~------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+.++|+.+++.- .+..++.+.|.+.|+.+. .|+.. + .+++||++...+. ++++.+++.++|++.|
T Consensus 333 ~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~---~p~~~--~-~~~lRi~~~~~~~---~~~~~~~~~~~l~~~~ 403 (410)
T PRK06290 333 TFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLIST---VPWDD--A-GHFLRFSVTFEAK---DEEEEDRILEEIKRRL 403 (410)
T ss_pred eeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEE---ECCcc--c-cCeEEEEEEcccc---cccchhHHHHHHHHHH
Confidence 566777775321 256678787766654432 35432 1 3589998764433 4899999999999888
Q ss_pred HH
Q 013217 396 EI 397 (447)
Q Consensus 396 ~~ 397 (447)
..
T Consensus 404 ~~ 405 (410)
T PRK06290 404 SD 405 (410)
T ss_pred hh
Confidence 64
No 76
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=4.1e-23 Score=204.25 Aligned_cols=332 Identities=16% Similarity=0.121 Sum_probs=215.5
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
++.++|..+++. .++.+.+++.+.+.+....+|+.. .| ...+.+.+.+++.+.+|.+ ++. +|.+++|
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G---~~~lr~~ia~~~~~~~~~~~~~~~---~vi~t~G 99 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSY---EG---MLAYRQAVADWYKRRFGVELDPET---EVLSLIG 99 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CC---CHHHHHHHHHHHHHhhCCCCCCCC---eEEECCC
Confidence 466888777664 477888888876643211233321 12 2345555556777777764 321 3455788
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|+.+.. .....|. ++++++++++ ++.+|++++++.+.+ ++++|
T Consensus 100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~G~--~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v 168 (383)
T TIGR03540 100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI--------GTLFAGG--EPYEMPLKEENGFLPDFDAIPEDIAK-KAKLM 168 (383)
T ss_pred cHHHHHHHHHHhCCCCCEEEEeCCCCcchHH--------HHHhcCC--EEEEEecCcccCCccCHHHHHhhccc-cceEE
Confidence 6 89998999999999999999998776532 2234454 5556666544 456899999988876 89999
Q ss_pred EEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC---CC---cccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~~---~~Di~~~s~~K~l--~Gp~gG 240 (447)
+++.|+||+ ..+ +++|.++|+++|+++++|+++. .+.+.+....+ ++ ...+++.|++|++ +|.|.|
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG 247 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIG 247 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceee
Confidence 999788886 555 6889999999999999999964 33332211111 11 1347789999987 477789
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
+++.++ ++.+++.........+. +.....+...++... ....++..+.+.++++.+.+.|++.|+.+..+ .
T Consensus 248 ~~i~~~------~l~~~~~~~~~~~~~~~-~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~ 318 (383)
T TIGR03540 248 MAVGNA------DLIAGLGKVKTNVDSGV-FQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKP-K 318 (383)
T ss_pred EEeCCH------HHHHHHHHHHHhcccCC-ChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCC-C
Confidence 999877 67776655322211222 323333334444432 22346667778888999999999988876643 3
Q ss_pred CCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
.+.++|+.+.+ +++..++...| +++||.+..+...+ ....+.+|+++. .+ ++++++..+.|
T Consensus 319 ~~~~~~~~l~~-~~~~~~~~~~ll~~~gi~v~~g~~f~---~~~~~~~Ris~~--~~----~~~l~~~l~~l 380 (383)
T TIGR03540 319 ATFYVWVPVPE-GYTSAEFAARLLEETGVVVTPGVGFG---EYGEGYIRISLT--VP----DERLEEAVARI 380 (383)
T ss_pred cceEEEEECCC-CCCHHHHHHHHHHHCCEEEecchhhC---ccCCCeEEEEec--CC----HHHHHHHHHHH
Confidence 46667888753 56677777765 67899996542221 112458999974 22 55655555544
No 77
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.93 E-value=4.5e-24 Score=207.60 Aligned_cols=318 Identities=18% Similarity=0.155 Sum_probs=201.9
Q ss_pred cCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHH
Q 013217 27 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 104 (447)
Q Consensus 27 ~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~ 104 (447)
.|+|+ .|+.+++++.+..... . . |+......+++ +++++++| +.+ .+.+++|++++..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~-----~--~-~~~~~~~~~l~----~~~a~~~g-~~~----~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGD-----D--V-YGEDPTTAKLE----ARAAELFG-KEA----ALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCC-----c--c-cCCCHHHHHHH----HHHHHHhC-CCe----EEEecCchHHHHHHHH
Confidence 46665 4789999987654321 1 1 22233344454 68889999 332 4556888899999999
Q ss_pred HhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh------hCCcEEEEcCC
Q 013217 105 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGAS 178 (447)
Q Consensus 105 al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~------~~~klii~~~~ 178 (447)
++++|||+|++.++.|.++..... .....|. +++.++.+ ++.+|++++++++++ .+|++|+++++
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAGA-----PEFLSGV--KLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCCc-----HHHHcCc--eEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 999999999999888765432110 1123444 45555554 367999999999874 26899998877
Q ss_pred CCCC-C---CChHHHHHHHHHhCCEEEEehhhhcccc-ccccCCCCC-CcccEEEeCCCcccCCCCCceEEeecCCcchh
Q 013217 179 AYPR-D---FDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 252 (447)
Q Consensus 179 ~~~~-~---~~~~~i~~ia~~~g~~livD~a~~~g~~-~~~~~~~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~ 252 (447)
+|++ . .++++|.++|+++|+++++|++|..+.. ..+...... .++|+++.|+||++++|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 7665 3 3567899999999999999999854422 111100111 25789999999999777666566666
Q ss_pred hHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC
Q 013217 253 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM 332 (447)
Q Consensus 253 ~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~ 332 (447)
++.+.+.....+. .++.....+.+ ++++..+...++.++.+++.++++++.+.|++.|+.+.. +...++++.+...
T Consensus 211 ~~~~~~~~~~~~~-~~~~~~~~~~~-~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~v~~~~~ 286 (338)
T cd06502 211 DFIARARRRRKQA-GGGMRQSGFLA-AAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNIVLLDPVEA 286 (338)
T ss_pred HHHHHHHHHHHHh-CCChhhHHHHH-HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCeEEEecCCc
Confidence 6766665432111 12222222222 122233333346677788999999999999988875433 3345555554321
Q ss_pred CCCHHHHHHHHh---hcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 333 GIDGARVEKILD---MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 333 ~~~~~~~~~~L~---~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
......+.+.|. +.||.+... ..+.||++++..++ ++|++++.+++++
T Consensus 287 ~~~~~~l~~~l~~~~~~gi~~~~~---------~~~~lRi~~~~~~~----~~~i~~~~~~l~~ 337 (338)
T cd06502 287 NAVFVELSKEAIERRGEGVLFYAW---------GEGGVRFVTHWDTT----EEDVDELLSALKA 337 (338)
T ss_pred cHHHHHHHHHHHHhhhCCEEEEec---------CCCeEEEEeecCCC----HHHHHHHHHHHhc
Confidence 111122333332 579888542 12589999998888 9999999998864
No 78
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=2.8e-23 Score=205.06 Aligned_cols=338 Identities=14% Similarity=0.095 Sum_probs=222.9
Q ss_pred hcCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
...|+|..+++.. ++.+.+++...+.+.+ .+|+.. .....+.+.+.+++.+.+|.+ +++ +|.+++|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~------~g~~~lr~~ia~~~~~~~g~~~~~~~---~i~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTAN------AGLLELRQEIAKYLKKRFAVSYDPND---EIIVTVG 89 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC------CCcHHHHHHHHHHHHHHhCCCCCCCC---cEEEeCC
Confidence 4568998888854 5567788776654321 233322 223456555667777776764 321 2445777
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~kli 173 (447)
+ +|+..++.++++|||+|++.+|.|+.+.. .+...|. ++++++++. +++.+|++++++++.+ ++++|
T Consensus 90 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 158 (378)
T PRK07682 90 ASQALDVAMRAIINPGDEVLIVEPSFVSYAP--------LVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAI 158 (378)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEE
Confidence 5 89999999999999999999998765421 2233444 445555543 3568999999998876 89999
Q ss_pred EEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCC--CC---CcccEEEeCCCccc--CCCCCce
Q 013217 174 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF---KYCDVVTTTTHKSL--RGPRGGM 241 (447)
Q Consensus 174 i~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~~---~~~Di~~~s~~K~l--~Gp~gG~ 241 (447)
+++.++||+ .. ++++|.++|+++|+++++|+++. .+.+.+...+ .+ ....+++.|++|++ +|.|.|+
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA-ELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 888788886 33 47899999999999999999964 4443321111 01 12358889999997 4777899
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
+++++ ++.+.+.........+.+... ..+...+++.. ....++..+.+.++++.+.+.|.+.|+++..+ ..
T Consensus 238 ~~~~~------~~i~~l~~~~~~~~~~~~~~~-q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~g 308 (378)
T PRK07682 238 IAAPV------YFSEAMLKIHQYSMMCAPTMA-QFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVP-GG 308 (378)
T ss_pred hhcCH------HHHHHHHHHHHhhccCCCHHH-HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-Ce
Confidence 99987 677766543322222233332 23333345432 12346667778899999999999988876543 34
Q ss_pred CeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
+++.|+.+.+.+++..++.+.| +++||.+..+...+ +..++++||++.. + ++++++..+.|+++++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~---~~~~~~iRis~~~--~----~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 309 AFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG---ESGEGFIRCSYAT--S----LEQLQEAMKRMKRFVEN 376 (378)
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhC---cCCCCeEEEEeCC--C----HHHHHHHHHHHHHHHhh
Confidence 5667777755456677777665 57899996542221 1124689999752 3 78888888888887753
No 79
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.5e-23 Score=203.73 Aligned_cols=337 Identities=16% Similarity=0.148 Sum_probs=215.7
Q ss_pred hhcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH
Q 013217 19 QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 96 (447)
Q Consensus 19 ~~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs 96 (447)
+.+.|+|-.++|. .++.+++++...+......+|+. .+....+ ++.+++++|+++++ |..++|+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~l----r~~ia~~l~~~~~~----v~~~~g~ 92 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP------PEGFPEL----RELILKDLGLDDDE----ALITAGA 92 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC------CcchHHH----HHHHHHhcCCCCCc----EEEeCCH
Confidence 3466788777774 57899999988776432222322 1222334 46788889998753 3345555
Q ss_pred -HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC--CCCCCCHHHHHHHhhhhCCcEE
Q 013217 97 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 97 -~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~id~~~l~~~~~~~~~kli 173 (447)
+++..++.+++++||+|++.+|.|..+. ..+...|. ++++++++. +++.+|++++++.+.+ ++++|
T Consensus 93 t~al~~~~~~~~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v 161 (380)
T PRK06225 93 TESLYLVMRAFLSPGDNAVTPDPGYLIID--------NFASRFGA--EVIEVPIYSEECNYKLTPELVKENMDE-NTRLI 161 (380)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchH--------HHHHHhCc--eEEeeccccccCCccCCHHHHHhhcCC-CceEE
Confidence 8999999999999999999987765331 12234454 455555532 2468999999999876 89999
Q ss_pred EEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC-CcccEEEeCCCcccC--CCCCceEEee
Q 013217 174 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-KYCDVVTTTTHKSLR--GPRGGMIFFK 245 (447)
Q Consensus 174 i~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~-~~~Di~~~s~~K~l~--Gp~gG~i~~~ 245 (447)
++++++||+ .. ++++|.++|+++|+++|+|+++. ++.........+ +...+++.|++|+++ |.|.|+++++
T Consensus 162 ~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~ 240 (380)
T PRK06225 162 YLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT 240 (380)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecC
Confidence 888777775 33 48899999999999999999853 222111000001 124578889999883 5667999998
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCCCCee
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHL 324 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~ 324 (447)
+ ++.+.+...... ..+ .+....++...++... ....+...+...++.+.+.+.|++ .|+.+...+....+
T Consensus 241 ~------~l~~~~~~~~~~-~~~-~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 311 (380)
T PRK06225 241 P------DLIEVVKSIVIN-DLG-TNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311 (380)
T ss_pred H------HHHHHHHHHHhc-ccC-CCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeE
Confidence 7 677766553221 122 2333333333344332 122234444455667777888877 46433211233556
Q ss_pred EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 325 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+|+++...+++..++.+.|.++||.+..+...+ .....+++|+++.. + +++++++++.|++++...
T Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--~~~~~~~iR~s~~~--~----~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 312 MVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS--KRFGDRYIRVSFSI--P----REQVEVFCEEFPDVVETL 377 (380)
T ss_pred EEEEcccccCCHHHHHHHHHHCCEEEcCCcccC--cCCCCceEEEEeCC--C----HHHHHHHHHHHHHHHHHh
Confidence 788876556678889999989999986542111 11234689999642 3 899999999999988744
No 80
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=1.4e-23 Score=207.11 Aligned_cols=336 Identities=14% Similarity=0.090 Sum_probs=216.7
Q ss_pred cCCCCC----CHHHHHHHhhhhhccCCCCCCCCcc-cCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHH
Q 013217 27 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 101 (447)
Q Consensus 27 ~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~-~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~ 101 (447)
+|.+|. .|.++++....+. +|..|+.+.|. |+-.....++| +++++++|.+. .+.++||+.++..
T Consensus 4 ~s~dyLgl~~~~~~~~~~~~a~~-~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~ 73 (392)
T PLN03227 4 ATHDFLSTSSSPTLRQTALESLS-HYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSS 73 (392)
T ss_pred cCcCccCCCCCHHHHHHHHHHHH-HhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHH
Confidence 566665 5888888877664 57777777664 44445566776 68999999875 3456999999999
Q ss_pred HHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh----------hCCc
Q 013217 102 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----------FRPK 171 (447)
Q Consensus 102 ~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~----------~~~k 171 (447)
++.++++|||+|++.++.|++.+. .+.+.+. +++.++.+ ..-|++.+.+.+.. .+++
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~--------~~~l~~~--~~~~~~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~ 140 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLV--------GVSLSRA--NVRWFRHN---DMKDLRRVLEQVRAQDVALKRKPTDQRR 140 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHH--------HHHHcCC--eEEEeCCC---CHHHHHHHHHHhhhhccccccccCCCcE
Confidence 999999999999999988877532 1223332 44443332 11233333333321 1577
Q ss_pred EEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccccc---ccC----CCCCCcccEEEeCCCcccCCCCCceE
Q 013217 172 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV----ADPFKYCDVVTTTTHKSLRGPRGGMI 242 (447)
Q Consensus 172 lii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~---~~~----~~~~~~~Di~~~s~~K~l~Gp~gG~i 242 (447)
+|++.++.+++ ..|+++|.++|++||+++++|++|..|.... +.. ..|..++|++++|++|.+ ||.||++
T Consensus 141 ~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v 219 (392)
T PLN03227 141 FLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMT 219 (392)
T ss_pred EEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEE
Confidence 88887554443 7799999999999999999999997664422 110 122336899999999975 6999999
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCC-cHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeC---
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG--- 318 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p-~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--- 318 (447)
++++ ++.+.+........+++. +....++...++..... .+++.+++.++.++|++.|++.++..+.+
T Consensus 220 ~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg 291 (392)
T PLN03227 220 VGSE------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRN 291 (392)
T ss_pred ecCH------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 8887 666555432222233332 23223333335544332 24568888999999999998755432211
Q ss_pred ------CCCCeeEEecCCCCCC--------CHHHHHHHHhhcCeEEccC-CCCCCC-CCCCCCeEEEecCccccCCCCHH
Q 013217 319 ------GSDNHLVLVDLRPMGI--------DGARVEKILDMASITLNKN-SVPGDK-SALVPGGIRIGSPAMTTRGFSEK 382 (447)
Q Consensus 319 ------~~~~~~~~v~~~~~~~--------~~~~~~~~L~~~gI~v~~~-~~p~~~-~~~~~~~iRig~~~~~~~g~~~~ 382 (447)
.+.++++.+.+.+... ...++.+.|.++||.+... ..|... ....+..||++++.-+| ++
T Consensus 292 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t----~e 367 (392)
T PLN03227 292 RLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHT----RE 367 (392)
T ss_pred ccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCC----HH
Confidence 1234455455533111 1246778888899988541 111110 11124589999998887 99
Q ss_pred HHHHHHHHHHHHHHHH
Q 013217 383 EFVAIADFIHEGVEIT 398 (447)
Q Consensus 383 di~~l~~~i~~~l~~~ 398 (447)
|++++++.|++++...
T Consensus 368 ei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 368 DIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998754
No 81
>PRK07337 aminotransferase; Validated
Probab=99.93 E-value=1.9e-23 Score=207.01 Aligned_cols=337 Identities=13% Similarity=0.102 Sum_probs=214.7
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sG 95 (447)
...+.|..+++. .++.+.+++...+.+. ..+|+. ......+++...+++.+.+|. +++ +|..++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~----~i~~t~G 98 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQYTS------ALGLAPLREAIAAWYARRFGLDVAPE----RIVVTAG 98 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCCCCC------CCCCHHHHHHHHHHHHHHhCCCCChH----hEEEecC
Confidence 456788777764 4678888888766532 123332 122345555555677666675 444 3445777
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~kli 173 (447)
+ +|+..++.+++++||+|++.+|.|+++.. .+...|. +++.++++. +++.+|++++++.+.+ ++++|
T Consensus 99 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 167 (388)
T PRK07337 99 ASAALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEG--RPVLVPSGPAERFQLTAADVEAAWGE-RTRGV 167 (388)
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCcCCHHHHHhhcCc-cceEE
Confidence 6 88888889999999999999999876532 1223344 455555654 3568999999999877 88999
Q ss_pred EEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-ccc-EEEeCCCccc--CCCCCceEEe
Q 013217 174 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFF 244 (447)
Q Consensus 174 i~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~D-i~~~s~~K~l--~Gp~gG~i~~ 244 (447)
+++.++||+ .. ++++|.++|+++|+++++|+++ .++.+.+...+... +.+ +++.|++|.+ +|.|.|++++
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~ 246 (388)
T PRK07337 168 LLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVV 246 (388)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeec
Confidence 888788886 44 4688889999999999999985 44443322111111 223 5678999987 5788899999
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 324 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 324 (447)
++ ++.+++.........+.+...+.++ ..++..-....+++..+++.++++.+.+.|++.|+.+...+....+
T Consensus 247 ~~------~l~~~l~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f 319 (388)
T PRK07337 247 PE------ALVGTFEKLAQNLFICASALAQHAA-LACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFY 319 (388)
T ss_pred CH------HHHHHHHHHHHHhccCCChHHHHHH-HHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEE
Confidence 87 6766665543222222223333332 2334311112345667778888888999998887764322245677
Q ss_pred EEecCCCC----CCCHHHHHH-HHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPM----GIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 325 ~~v~~~~~----~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+|++++.. ..+..++.. .++++||.+..+...+. ....+++|+++.. . +++++...+.|.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~--~~~~~~~Ri~~~~--~----~~~l~~~l~rl~~~ 386 (388)
T PRK07337 320 VYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP--HAPRDYIRLSYAT--S----MSRLEEAVARLGKL 386 (388)
T ss_pred EEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC--CCCCCEEEEEecC--C----HHHHHHHHHHHHHH
Confidence 88888642 245666654 46789999965422221 1124689999753 2 66766666666554
No 82
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.93 E-value=2.3e-23 Score=206.32 Aligned_cols=337 Identities=15% Similarity=0.098 Sum_probs=216.3
Q ss_pred hhcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCC
Q 013217 19 QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLS 94 (447)
Q Consensus 19 ~~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~s 94 (447)
.++.++|..+++. .++.+.+++.+.+......+|+.. .....+.+.+.+++.+.+|. ++++ +|.+|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~g~~~~~~~---~I~it~ 99 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLF------HGTLDFREAAAQWYEQRFGLAVDPET---EVLPLI 99 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCC------CCCHHHHHHHHHHHHHhhCCcCCCcC---eEEECC
Confidence 3566888888874 477888888776543211233221 11234554555677666664 4431 355688
Q ss_pred cH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcE
Q 013217 95 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKL 172 (447)
Q Consensus 95 Gs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kl 172 (447)
|+ +++..++.++++|||+|++.+|.|.++.. .+...|. ++++++++++ .+.+|++++++.+.. ++|+
T Consensus 100 Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~ 168 (388)
T PRK07366 100 GSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGG--QIYPMPLRAENDFLPVFADIPTEVLA-QARL 168 (388)
T ss_pred CcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEECCCccCCCCCHHHHHHhhcc-cceE
Confidence 87 89999999999999999999998876532 2334554 5556666643 467899999887766 7999
Q ss_pred EEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccC--CCCC--C-c--ccEEEeCCCccc--CCCC
Q 013217 173 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPF--K-Y--CDVVTTTTHKSL--RGPR 238 (447)
Q Consensus 173 ii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~--~~~~--~-~--~Di~~~s~~K~l--~Gp~ 238 (447)
|+++.++||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+.. ++.. . . .-+++.|++|++ +|.|
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlR 247 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPY-VDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFR 247 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecch-hhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchh
Confidence 9998888986 444 567788999999999999985 444433221 1111 1 1 236789999986 6889
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeC
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 318 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 318 (447)
.||++.++ ++.+.+.....+...+++.....++ ..++.. ....+++..+.+.++++.+.+.|++.|+.+..+
T Consensus 248 iG~~v~~~------~li~~l~~~~~~~~~~~~~~~~~~a-~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p 319 (388)
T PRK07366 248 IGFAIGNA------QLIQALRQVKAVVDFNQYRGILNGA-IAALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLP 319 (388)
T ss_pred heehcCCH------HHHHHHHHHHhhcccCCCHHHHHHH-HHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 99999887 6777776543322222222222222 224422 122346677888888889999998888765433
Q ss_pred CCCCeeEEecCCCC-CCCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 319 GSDNHLVLVDLRPM-GIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 319 ~~~~~~~~v~~~~~-~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
....++|+++... ..+..++.+. ++++||.+..+...+ ....+++||++. .+ ++++++..+.|.+.
T Consensus 320 -~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~----~~~l~~~l~rl~~~ 387 (388)
T PRK07366 320 -EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFG---KSGEGYVRFALV--HD----PDILEEAVERIAAF 387 (388)
T ss_pred -CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhC---cCCCCeEEEEec--CC----HHHHHHHHHHHHHh
Confidence 3467778887642 1234566554 478899996532221 112468999864 23 67777777776553
No 83
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=1.6e-23 Score=208.32 Aligned_cols=329 Identities=21% Similarity=0.228 Sum_probs=218.2
Q ss_pred EecCCCCC----CHHHHHHHhhhhhccCCCCCCCCccc-CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHH
Q 013217 25 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 99 (447)
Q Consensus 25 l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~-~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~ 99 (447)
...|.+|. +|.|++++...+. +|..+..++|.. +..+...++| +.+++++|.+. .+.++||++||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an 118 (402)
T TIGR01821 49 VWCSNDYLGMGQHPEVLQAMHETLD-KYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAN 118 (402)
T ss_pred EeEccCcCCCCCCHHHHHHHHHHHH-HcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHH
Confidence 45677776 6899999988775 455555555533 2344445565 67889999653 35569999999
Q ss_pred HHHHHHhcC--CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---hCCcEEE
Q 013217 100 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 174 (447)
Q Consensus 100 ~~~~~al~~--pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~~~klii 174 (447)
..++..+.+ +||.|+.....|++... .+...|. .+..++ ..|+++++++++. .++++|+
T Consensus 119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~ 182 (402)
T TIGR01821 119 DATLATLAKIIPGCVIFSDELNHASMIE--------GIRHSGA--EKFIFR------HNDVAHLEKLLQSVDPNRPKIIA 182 (402)
T ss_pred HHHHHHhhCCCCCCEEEEcchHhHHHHH--------HHHHcCC--eEEEEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 999988765 78888776656654432 1223333 222222 2477888887763 2578888
Q ss_pred EcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccccc---ccCC-CCC-CcccEEEeCCCcccCCCCCceEEeecC
Q 013217 175 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 247 (447)
Q Consensus 175 ~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~---~~~~-~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~~ 247 (447)
++++++++ ..|+++|.++|+++|+++++|++|+.|.... +... ..+ ...|+++.|++|.++ ..||++++++
T Consensus 183 ~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~GG~i~~~~- 260 (402)
T TIGR01821 183 FESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVGGYIAASR- 260 (402)
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCCceeecCH-
Confidence 88666553 7799999999999999999999998775422 1111 111 136899999999985 4568888877
Q ss_pred CcchhhHHHHhhhccCCC-CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEE
Q 013217 248 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 326 (447)
Q Consensus 248 ~~~~~~~~~~i~~~~~~~-~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 326 (447)
++.+.+.....+. +.++.+...+++..++++.+... ....++..++++++.+.|++.|++++.+ .++++.
T Consensus 261 -----~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~ 331 (402)
T TIGR01821 261 -----KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN--PSHIVP 331 (402)
T ss_pred -----HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEEE
Confidence 6766665432222 12334444555555678766543 4455666788999999999888876643 344444
Q ss_pred ecCCCCCCCHHHHHHHHh-hcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
+.+... ....++.+.|. ++||.++....|.. +....++|++++..++ ++|++++.++|+++++.
T Consensus 332 i~~~~~-~~a~~~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~~t----~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 332 VIIGDA-ALCKKVSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPAHT----DKMIDDLVEALLLVWDR 396 (402)
T ss_pred EEeCCH-HHHHHHHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCCCC----HHHHHHHHHHHHHHHHH
Confidence 443211 12456777764 67999976433321 2224589999999888 99999999999988764
No 84
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=1.3e-23 Score=209.54 Aligned_cols=329 Identities=18% Similarity=0.177 Sum_probs=217.0
Q ss_pred EecCCCCC----CHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHH
Q 013217 25 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 99 (447)
Q Consensus 25 l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~ 99 (447)
...|.+|. +|.+++++...+. +|..+..+.|.+.+ .+...++| +++++++|.+. .+.++||++||
T Consensus 50 ~~~sn~yl~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~ 119 (410)
T PRK13392 50 IWCSNDYLGMGQHPDVIGAMVDALD-RYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSN 119 (410)
T ss_pred EEECCCccCCCCCHHHHHHHHHHHH-HcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHH
Confidence 34566664 6899999987664 45444444443333 23345565 67899999753 35569999999
Q ss_pred HHHHHHhc--CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---hCCcEEE
Q 013217 100 FEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 174 (447)
Q Consensus 100 ~~~~~al~--~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~~~klii 174 (447)
..++..+. .|||.|++..+.|++.+. .+...|..+ ..++. .|++++++.+.. .++++|+
T Consensus 120 ~~~i~~l~~~~~g~~vi~~~~~h~s~~~--------~~~~~g~~~--~~~~~------~d~~~l~~~l~~~~~~~t~~v~ 183 (410)
T PRK13392 120 DAALSTLGKLLPGCVILSDALNHASMIE--------GIRRSGAEK--QVFRH------NDLADLEEQLASVDPDRPKLIA 183 (410)
T ss_pred HHHHHHHhcCCCCCEEEEehhhhHHHHH--------HHHHcCCeE--EEEeC------CCHHHHHHHHHhccCCCCEEEE
Confidence 98888775 489988887666665431 223445432 22221 255566655542 3788999
Q ss_pred EcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccccc---ccC--CCCCCcccEEEeCCCcccCCCCCceEEeecC
Q 013217 175 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKD 247 (447)
Q Consensus 175 ~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~---~~~--~~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~ 247 (447)
++++++++ ..|+++|.++|+++|+++++|++|+.|.... +.. ....+..|+++.|++|++++ .||++++++
T Consensus 184 i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~~~- 261 (410)
T PRK13392 184 FESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAASA- 261 (410)
T ss_pred EeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhcCH-
Confidence 88777664 7899999999999999999999998776422 110 01112468999999999865 468888776
Q ss_pred CcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEE
Q 013217 248 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 326 (447)
Q Consensus 248 ~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 326 (447)
++.+.+.....+.. .++.+....++..++++..... ....+++.++++++.+.|.+.|+++..+ +++++.
T Consensus 262 -----~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~ 332 (410)
T PRK13392 262 -----DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNANGIPVMPS--PSHIVP 332 (410)
T ss_pred -----HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEE
Confidence 67776655433322 2223334455666678765432 3445778889999999999888876542 344444
Q ss_pred ecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
+.+.. ..+..++.+.| +++||.++....|.. +....++|++++..++ ++|+++++++|+++++.
T Consensus 333 i~~~~-~~~~~~~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~t----~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 333 VMVGD-PTLCKAISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLHD----DEDIDALVAALVAIWDR 397 (410)
T ss_pred EEeCC-HHHHHHHHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHH
Confidence 44321 11345677766 578999976433321 2234689999998888 99999999999988764
No 85
>PRK09082 methionine aminotransferase; Validated
Probab=99.93 E-value=1.4e-23 Score=207.72 Aligned_cols=337 Identities=14% Similarity=0.113 Sum_probs=220.1
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
...++|..+++. .++.+.+++.+.+...+ .+|+.. .....+++...+++.+++|.+.+.- .+|.+++|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~------~G~~~lr~~~a~~l~~~~~~~~~~~-~~i~~t~G~~ 101 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPPM------TGVAALREAIAAKTARLYGRQYDAD-SEITVTAGAT 101 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCCC------CCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCHH
Confidence 345788766553 35788888887665321 233322 2234555556678888888753210 134457775
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+|+..++.++++|||+|++.+|.|+++.. .+...|. +++.++++.+++.+|++++++.+++ ++++|+++
T Consensus 102 ~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~ 170 (386)
T PRK09082 102 EALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGG--RAVRVALQPPDFRVDWQRFAAAISP-RTRLIILN 170 (386)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccccCCHHHHHHhcCc-cceEEEEe
Confidence 89999999999999999999998876532 2334454 5666667655678999999999977 89999998
Q ss_pred CCCCCC--C---CChHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCC-----CcccEEEeCCCccc--CCCCCceEE
Q 013217 177 ASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF-----KYCDVVTTTTHKSL--RGPRGGMIF 243 (447)
Q Consensus 177 ~~~~~~--~---~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~-----~~~Di~~~s~~K~l--~Gp~gG~i~ 243 (447)
.++||+ . .++++|.++|+++|+++|+|+++ ..+.+.+. .++.. ....+++.|++|.+ +|.|.|+++
T Consensus 171 ~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv 249 (386)
T PRK09082 171 TPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVY-EHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCV 249 (386)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhh-hhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhh
Confidence 777775 3 36789999999999999999996 33333221 11111 12458889999987 578889999
Q ss_pred eecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCe
Q 013217 244 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 323 (447)
Q Consensus 244 ~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 323 (447)
+++ ++.+.+.........+.+...+ .+++..+.. .....++..+.+.++++.+.+.|.+.|+++..+ ..++
T Consensus 250 ~~~------~l~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~g~~ 320 (386)
T PRK09082 250 APA------ALSAEFRKVHQYNTFTVNTPAQ-LALADYLRA-EPEHYLELPAFYQAKRDRFRAALANSRFKLLPC-EGTY 320 (386)
T ss_pred CCH------HHHHHHHHHHhhhcCCCChHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CeeE
Confidence 987 6766665543211122222222 233333432 123346667778889999999999888876543 3466
Q ss_pred eEEecCCC-CCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 324 LVLVDLRP-MGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 324 ~~~v~~~~-~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
++|++++. .+.+..++.+.| +++||.+..+...+. .+...+++|+++.. . ++++++..+.|.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~-~~~~~~~~Ri~~~~--~----~~~l~~~~~rl~ 384 (386)
T PRK09082 321 FQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYA-DPFPHRLVRLCFAK--Q----EETLDAAAERLC 384 (386)
T ss_pred EEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCEEEEEecC--C----HHHHHHHHHHHh
Confidence 77888753 245677787764 789999965432111 12234689999753 3 677777666664
No 86
>PLN02721 threonine aldolase
Probab=99.93 E-value=1.8e-23 Score=204.56 Aligned_cols=325 Identities=17% Similarity=0.149 Sum_probs=204.2
Q ss_pred eeEecCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHH
Q 013217 23 LELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 101 (447)
Q Consensus 23 i~l~~~~n-~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~ 101 (447)
++|..+++ +.++.+++++...... ....+|. ...+++| +.+++++|.+. .+.+++|++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~a~~~~~~~------~~~~~~~--~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~ 70 (353)
T PLN02721 8 VDLRSDTVTKPTDAMRAAMANAEVD------DDVLGYD--PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLI 70 (353)
T ss_pred hhhhcccccCCCHHHHHHHHhccCC------CcccCCC--HHHHHHH----HHHHHHhCCce-----eEEecCccHHHHH
Confidence 45555555 3568888887642111 1112222 2245565 57888999875 2345789988888
Q ss_pred HHHHhcC-CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh------hCCcEEE
Q 013217 102 VYTAILK-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLII 174 (447)
Q Consensus 102 ~~~al~~-pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~------~~~klii 174 (447)
++.++++ |||+|++.++.|.+.+..+ ......|. +++.++.+ +++.+|++++++.+++ .++++|+
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENG-----GISTLGGV--HPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhccc-----chhhhcCc--eeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 8888877 9999999988764332110 01223343 55555555 4577999999999973 2789988
Q ss_pred EcC-CCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccc-cccCCCC-CCcccEEEeCCCcccCCCCCceEEeec
Q 013217 175 AGA-SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADP-FKYCDVVTTTTHKSLRGPRGGMIFFKK 246 (447)
Q Consensus 175 ~~~-~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~-~~~~~~~-~~~~Di~~~s~~K~l~Gp~gG~i~~~~ 246 (447)
+++ +++|+ ..| +++|.++|+++|+++++|++|..+... .+..+.. ..++|.++.|+||++++|.||+++.++
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 222 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSK 222 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCH
Confidence 864 45554 444 689999999999999999998654321 1211111 125788899999999888776666665
Q ss_pred CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEe-eeCCCCCee
Q 013217 247 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL-VSGGSDNHL 324 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~ 324 (447)
++.+.+...... ..+++......+. .++..+. ...+..++..++++.+.+.|++. ++.+ +.+ ...++
T Consensus 223 ------~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~ 291 (353)
T PLN02721 223 ------SFIRKAKRLRKT-LGGGMRQVGVLAA-AALVALQ--ENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAA-VETNI 291 (353)
T ss_pred ------HHHHhHHHHHHh-cCCCeehhHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCCcEEecCC-ccceE
Confidence 666654432211 1122222111111 1121111 12223455567788999999885 7755 333 33456
Q ss_pred EEecCCCC-CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 325 ~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+++.+... +.+...+.+.|.++||.+... ...++|++++..++ ++|+++++++|++++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~---------~~~~lR~~~~~~~~----~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 292 VYFDITDGSRITAEKLCKSLEEHGVLLMPG---------NSSRIRVVTHHQIS----DSDVQYTLSCFQQAAL 351 (353)
T ss_pred EEEEccCCccccHHHHHHHHHhCCcEEecC---------CCceEEEEecCcCC----HHHHHHHHHHHHHHhh
Confidence 67776431 146778999999999999642 24589999876666 9999999999988764
No 87
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-22 Score=201.73 Aligned_cols=319 Identities=15% Similarity=0.160 Sum_probs=203.0
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
++.++|..+... .|+.+++++...+.+....+|+. ......+++...+++.+.+|.+ ++. .+.+|+|
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~~---~i~vt~G 105 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPP------FEGTASFRQAITDWYHRRYGVELDPDS---EALPLLG 105 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCC------CCCCHHHHHHHHHHHHHHHCCCcCCCC---eEEEccC
Confidence 455777644332 35567777665553321123332 2223456555556777766753 431 2445778
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|+++.. .+...|. ++++++++++ ++.+|++++++.+.+ ++|+|
T Consensus 106 ~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i 174 (394)
T PRK05942 106 SKEGLTHLALAYVNPGDVVLVPSPAYPAHFR--------GPLIAGA--QIYPIILKPENDWLIDLSSIPEEVAQ-QAKIL 174 (394)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeecCCccCCccCHHHHHHhccc-cceEE
Confidence 6 89988999999999999999999877532 1223454 5556666543 457999999998876 89999
Q ss_pred EEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC---C---CcccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---KYCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~---~~~Di~~~s~~K~l--~Gp~gG 240 (447)
++++|+||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+....+ + ....+++.|++|.+ +|.|.|
T Consensus 175 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG 253 (394)
T PRK05942 175 YFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVG 253 (394)
T ss_pred EEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhhee
Confidence 999788886 555 6788899999999999999964 33332211111 1 12347789999976 577789
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
+++.++ ++.+.+.........+. +.....++..+++.. ....++..+++.++++.+.+.|.+.|+.+..+ .
T Consensus 254 ~i~~~~------~l~~~l~~~~~~~~~~~-~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~ 324 (394)
T PRK05942 254 FVVGNR------HIIQGLRTLKTNLDYGI-FSALQKAAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT-K 324 (394)
T ss_pred eeecCH------HHHHHHHHHHhhcccCC-CHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-C
Confidence 999887 67777765432111122 222233334455422 22345667777888888999998888876543 3
Q ss_pred CCeeEEecCCCCCCCHHHHH-HHHhhcCeEEccCCCCCCCCCCCCCeEEEecC
Q 013217 321 DNHLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSP 372 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~ 372 (447)
.+.++|+++.. +++..++. +.|+++||.+..+...+ ....+++|+++.
T Consensus 325 ~~~f~~~~~~~-~~~~~~~~~~~l~~~gV~v~~g~~f~---~~~~~~iRis~~ 373 (394)
T PRK05942 325 ATMYLWVPCPV-GMGSTDFALNVLQKTGVVVTPGNAFG---EGGEGYVRISLI 373 (394)
T ss_pred eeeEEEEECCC-CCCHHHHHHHHHHHCCEEEeCChhhC---cCCCCeEEEEec
Confidence 45567888753 34555555 46678999995432211 112468999974
No 88
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=2.7e-23 Score=204.17 Aligned_cols=328 Identities=16% Similarity=0.146 Sum_probs=226.6
Q ss_pred CeeEecCCCCC----CHHHHHHHhhhhhccCCCCCCCCcccCch-hHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH
Q 013217 22 SLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 96 (447)
Q Consensus 22 ~i~l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~g~-~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs 96 (447)
.+....|.+|+ .|+++++....+ .+|..|..++|...|. ....++| +.+++++|.+. .+..+||.
T Consensus 103 ~~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sSGy 172 (476)
T PLN02955 103 KLLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPTGF 172 (476)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECChH
Confidence 34456899987 688999887765 4688888888766554 5556677 68999999986 34569999
Q ss_pred HHHHHHHHHhc--------------CCCCEEEEecCCCCcccCCCccccccccccccc--eeEEEecccCCCCCCCCHHH
Q 013217 97 PANFEVYTAIL--------------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--YFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 97 ~a~~~~~~al~--------------~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~id~~~ 160 (447)
.||..++.++. +++|.|+.....|.+.+. .+.++.. ..+++.++ ..|+++
T Consensus 173 ~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d--------G~~ls~~~~~a~~~~f~------HND~~~ 238 (476)
T PLN02955 173 AANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID--------GVRLAERQGNVEVFVYR------HCDMYH 238 (476)
T ss_pred HHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH--------HHHhccccCCceEEEeC------CCCHHH
Confidence 99999998872 466788887777766532 2222211 12444444 358999
Q ss_pred HHHHhhhhC--CcEEEEc--CCCCCCCCChHHHHHHHHHhCCEEEEehhhhcccccc---ccCC-CCC-CcccEEEeCCC
Q 013217 161 LEKTAILFR--PKLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTH 231 (447)
Q Consensus 161 l~~~~~~~~--~klii~~--~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~---~~~~-~~~-~~~Di~~~s~~ 231 (447)
|+++++..+ .++|++. .+..+...|+++|.++|++||+++++|++|+.|.+.. |... ..+ +..|++++|++
T Consensus 239 Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLs 318 (476)
T PLN02955 239 LNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLS 318 (476)
T ss_pred HHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCc
Confidence 998886532 3455554 2233337799999999999999999999998886644 1111 111 24789999999
Q ss_pred cccCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcH-HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 232 KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 232 K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~-~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
|.+ |.+||++++++ ++.+.+.....+...++... ...++..++++.+... ..+++++.+|.+++.+.
T Consensus 319 KA~-G~~GGfi~gs~------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~--- 386 (476)
T PLN02955 319 KAA-GCHGGFIACSK------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL--- 386 (476)
T ss_pred cch-hccCceeecHH------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---
Confidence 986 67899999988 67777765444444444443 3444555577766443 34678888888888873
Q ss_pred CCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 311 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 311 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
.|+.+ .++++.+-+... .....+.+.|.++||.++....|.. |....++||+.++.++ ++|+++++++
T Consensus 387 ~G~~~-----~sPI~pI~ig~~-~~a~~~~~~L~~~Gi~v~~i~yPtV--P~g~~rLRi~lsA~Ht----~edId~lv~~ 454 (476)
T PLN02955 387 SGVDI-----SSPIISLVVGNQ-EKALKASRYLLKSGFHVMAIRPPTV--PPNSCRLRVTLSAAHT----TEDVKKLITA 454 (476)
T ss_pred cCCCC-----CCCEEEEEeCCH-HHHHHHHHHHHHCCCEEEEECCCCC--CCCCceEEEeeCCCCC----HHHHHHHHHH
Confidence 36643 245555544432 2345678899999999986544432 3445689999999888 9999999999
Q ss_pred HHHHHHH
Q 013217 391 IHEGVEI 397 (447)
Q Consensus 391 i~~~l~~ 397 (447)
|.++...
T Consensus 455 L~~~~~~ 461 (476)
T PLN02955 455 LSSCLDF 461 (476)
T ss_pred HHHHHhh
Confidence 9887654
No 89
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=5.1e-23 Score=205.18 Aligned_cols=330 Identities=19% Similarity=0.212 Sum_probs=217.1
Q ss_pred eEecCCCCC----CHHHHHHHhhhhhccCCCCCCCCccc-CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHH
Q 013217 24 ELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 98 (447)
Q Consensus 24 ~l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~-~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a 98 (447)
....|.||+ +|.|.+++...+. +|..+..+.|.+ +..+...++| +.+++++|.+. .+.++||++|
T Consensus 49 ~~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~a 118 (407)
T PRK09064 49 TVWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVS 118 (407)
T ss_pred EEEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHH
Confidence 345677775 7899999988765 354444444433 3344555665 57888898643 3456899999
Q ss_pred HHHHHHHhcC--CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---hCCcEE
Q 013217 99 NFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI 173 (447)
Q Consensus 99 ~~~~~~al~~--pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~~~kli 173 (447)
|..++..+.. +++.|+...+.|.+.+. .+...+. +...++ ..|+++++++++. .++++|
T Consensus 119 n~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v 182 (407)
T PRK09064 119 NDATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRC--EKHIFR------HNDVAHLEELLAAADPDRPKLI 182 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCC--cEEEEC------CCCHHHHHHHHHhccCCCCeEE
Confidence 9988887754 78877776655544321 1222332 222322 2478888888763 367888
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccccc-c--cC-CCCC-CcccEEEeCCCcccCCCCCceEEeec
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 246 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~-~--~~-~~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~ 246 (447)
++++++++. ..|+++|.++|+++|+++++|++|+.|.... + .. ..++ ...|++++|++|.+ |+.||++++++
T Consensus 183 ~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~ 261 (407)
T PRK09064 183 AFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA 261 (407)
T ss_pred EEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH
Confidence 888655543 6799999999999999999999998775321 1 10 0111 23589999999988 45679998877
Q ss_pred CCcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeE
Q 013217 247 DPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 325 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 325 (447)
++.+.+.....+.. .++.+....++...+++.+... ....+++.++++++.+.|.+.|++++.+ .++++
T Consensus 262 ------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~iv 331 (407)
T PRK09064 262 ------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMPN--ESHIV 331 (407)
T ss_pred ------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEE
Confidence 66666654322221 2233344445555677766543 3346778899999999999988876643 34455
Q ss_pred EecCCCCCCCHHHHHHHHh-hcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 326 ~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+.+.. .....++.+.|. ++||.++....|.. +...+++|++++..++ ++|++++++.|++++..
T Consensus 332 ~i~~~~-~~~~~~l~~~L~~~~gi~v~~~~~p~~--~~~~~~lRis~~~~~t----~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 332 PVMVGD-PEKCKKASDMLLEEHGIYVQPINYPTV--PRGTERLRITPTPFHT----DEMIDHLVEALVEVWAR 397 (407)
T ss_pred EEEeCC-HHHHHHHHHHHHHhCCEEEeeECCCCC--CCCCceEEEEeCCCCC----HHHHHHHHHHHHHHHHH
Confidence 554432 123456777764 57999976433321 2223579999998888 99999999999998764
No 90
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.93 E-value=7.5e-23 Score=202.66 Aligned_cols=335 Identities=19% Similarity=0.178 Sum_probs=217.4
Q ss_pred hcCeeEecCC--CC-CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH
Q 013217 20 FKSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 96 (447)
Q Consensus 20 ~~~i~l~~~~--n~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs 96 (447)
+..|+|..+. .+ .+|.+.+++...+.. |...+...++..|. ..+.+..++++++++|.+. .+.++||+
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~g~---~~l~~~l~~~l~~~~g~~~-----~i~~~sG~ 103 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQQ-YGVGAGAVRTIAGT---LRLHEELEEKLAKFKKTEA-----ALVFQSGF 103 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHH-cCCCCCccCcccCC---cHHHHHHHHHHHHHhCCCc-----EEEECcHH
Confidence 3457877553 34 678888888776643 32222222222222 2333344578889999753 35568999
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh---CCcEE
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLI 173 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~---~~kli 173 (447)
+++..++.++++|||.|++.++.|+++.. .+...+. +...+ ..+|++++++.+.+. ++++|
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~~~~~v 167 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIID--------GLRLTKA--TKKIY------KHADMDDLDRVLRENPSYGKKLI 167 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhccCCCeEE
Confidence 99998999999999999999888776532 1223332 22221 147889998877642 57888
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccccc-cc---CCCCC-CcccEEEeCCCcccCCCCCceEEeec
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV---VADPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 246 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~-~~---~~~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~ 246 (447)
+++...+++ ..|+++|.++|++||+++++|++|..|.... +. ....+ ...|+++.|+||++ |++||+++.++
T Consensus 168 ~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~ 246 (385)
T TIGR01825 168 VTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK 246 (385)
T ss_pred EEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH
Confidence 777544443 6799999999999999999999987664431 10 00111 24789999999998 45679988877
Q ss_pred CCcchhhHHHHhhhccCCCCCC-CCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeE
Q 013217 247 DPVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 325 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g-~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 325 (447)
++.+.+.....+...+ .++...++++..+++.+... .+..++..++++++.+.|.+.|+++..+. ..++
T Consensus 247 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~ 316 (385)
T TIGR01825 247 ------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTGGSE--TPIT 316 (385)
T ss_pred ------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCEE
Confidence 6767665433222222 33445556666677655332 34567778889999999988888776432 2233
Q ss_pred EecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 326 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+.+.. ..+..++.+.|.+.||.+.....|.. +....+||++++..++ ++|++++++.|+++++.
T Consensus 317 ~~~~~~-~~~~~~~~~~L~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~----~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 317 PVVIGD-EKAAQEFSRRLFDEGIFAQSIVFPTV--PRGTARIRNIPTAEHT----KDDLDQALDAYEKVGKE 381 (385)
T ss_pred EEEECC-HHHHHHHHHHHHHCCcEEcccCCCCC--CCCCceEEEEEcCCCC----HHHHHHHHHHHHHHHHH
Confidence 333322 12346677777777999854322221 1123589999887777 99999999999988753
No 91
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-22 Score=201.23 Aligned_cols=340 Identities=15% Similarity=0.116 Sum_probs=212.8
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
.+.++|..+... .|+.+.+++...+......+|+.. +....+.+.+.+++.+.+|.+ +++ +|.+|+|
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lR~~ia~~l~~~~~~~~~~~~---~I~it~G 103 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVS------KGIYKLRLAICNWYKRKYNVDLDPET---EVVATMG 103 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCCCC---eEEECCC
Confidence 455777554432 466677776554432112234332 223345555567787777754 321 3556899
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHH----HHHhhh--
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDML----EKTAIL-- 167 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l----~~~~~~-- 167 (447)
+ +++..++.++++|||.|++.+|.|+++.. .+...|. ++++++++. +++.+|++.+ +++++.
T Consensus 104 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 173 (403)
T PRK08636 104 SKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ--------AFILAGG--NVHKMPLEYNEDFELDEDQFFENLEKALRESS 173 (403)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEeccccccCccChhhhhhHHHHHHhhcc
Confidence 8 89999999999999999999998876532 2334554 555555532 3467998754 555543
Q ss_pred hCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC---CC-c--ccEEEeCCCccc--
Q 013217 168 FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-Y--CDVVTTTTHKSL-- 234 (447)
Q Consensus 168 ~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~~-~--~Di~~~s~~K~l-- 234 (447)
.++++|+++.|+||+ ..+ +++|.++|++|++++|+|+++ ..+.+.+....+ ++ . ..+++.|++|++
T Consensus 174 ~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 252 (403)
T PRK08636 174 PKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAY-ADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNM 252 (403)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccc-hhhccCCCCCCChhcCCCccccEEEEEecccccCC
Confidence 367888888778886 444 578888999999999999985 444433211111 11 1 225578999997
Q ss_pred CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcE
Q 013217 235 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 314 (447)
Q Consensus 235 ~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 314 (447)
+|.|.||++.++ ++.+.+.........+.+...+.++. .++... ....++..+.+.++++.+.+.|.+.|+.
T Consensus 253 ~GlRiG~iv~~~------~li~~~~~~~~~~~~~~~~~~q~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 324 (403)
T PRK08636 253 AGWRVGFVVGNK------KLVGALKKIKSWLDYGMFTPIQVAAT-IALDGD-QSCVEEIRETYRKRRDVLIESFANAGWE 324 (403)
T ss_pred ccceeeeeeCCH------HHHHHHHHHHHHhcccCChHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 688999999877 67666655332211233333333332 334321 2234566677788888899999888876
Q ss_pred eeeCCCCCeeEEecCCCC--CCCHHHHHH-HHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 315 LVSGGSDNHLVLVDLRPM--GIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~~--~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
+..+ ....++|+++++. +.+..++.. .++++||.+..+... .....+++||++. +. ++++++..+.|
T Consensus 325 ~~~p-~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f---~~~~~~~iRi~~~--~~----~~~l~~~~~rl 394 (403)
T PRK08636 325 LQKP-RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGF---GEYGDEYVRIALI--EN----ENRIRQAARNI 394 (403)
T ss_pred ccCC-CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhh---CcCCCCeEEEEec--CC----HHHHHHHHHHH
Confidence 5543 3467788888642 234566665 466799999543221 1112468999974 33 78888888888
Q ss_pred HHHHHH
Q 013217 392 HEGVEI 397 (447)
Q Consensus 392 ~~~l~~ 397 (447)
.++++.
T Consensus 395 ~~~l~~ 400 (403)
T PRK08636 395 KKFLKE 400 (403)
T ss_pred HHHHHh
Confidence 777753
No 92
>PRK08068 transaminase; Reviewed
Probab=99.93 E-value=1.1e-22 Score=201.38 Aligned_cols=319 Identities=15% Similarity=0.084 Sum_probs=206.4
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sG 95 (447)
++.|+|..+... .++.+.+++...+......+|+.. .....+.+.+.+++.+.+|. ++++ +|.+|+|
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~g~~~lr~aia~~~~~~~g~~~~~~~---~i~it~G 102 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPF------RGYPFLKEAAADFYKREYGVTLDPET---EVAILFG 102 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCCCc---cEEEcCC
Confidence 455888766543 357788888776654222234321 12345655555666666674 4431 2334777
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|+.+.. .+...|. +++.++++++ ++.+|++++++.+.+ ++++|
T Consensus 103 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v 171 (389)
T PRK08068 103 GKAGLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARA--QFETMPLIAENNFLPDYTKIPEEVAE-KAKLM 171 (389)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEeecccccCCCCCHHHHHHhccc-cceEE
Confidence 6 88888889999999999999998876532 2334554 5555566643 467899999998876 89999
Q ss_pred EEcCCCCCC--CCCh---HHHHHHHHHhCCEEEEehhhhccccccccCCCC-CC-----cccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK-----YCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~~~---~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~-~~-----~~Di~~~s~~K~l--~Gp~gG 240 (447)
+++.|+||+ ..+. ++|.++|+++|+++|+|+++ ..+.+.+..+.+ +. ...+++.|++|.+ +|.|.|
T Consensus 172 ~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 250 (389)
T PRK08068 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAY-GAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVA 250 (389)
T ss_pred EEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhh-hhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeE
Confidence 999888886 5554 67888899999999999996 333332211111 11 1347889999987 578889
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
+++.++ ++.+.+.....+...+.+...+.++. .++..- ....+..++++.++++.+.+.|++.|+.+..+ .
T Consensus 251 ~~~~~~------~l~~~l~~~~~~~~~~~~~~~q~~~~-~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~-~ 321 (389)
T PRK08068 251 FAVGNE------SVIEAINLLQDHLFVSLFGAIQDAAI-EALLSD-QSCVAELVARYESRRNAFISACREIGWEVDAP-K 321 (389)
T ss_pred eEecCH------HHHHHHHHHHhhccCCCChHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-C
Confidence 999877 67777765443333333333333322 233221 13346778888888999999998888875543 3
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHh-hcCeEEccCCCCCCCCCCCCCeEEEecC
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSP 372 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~~ 372 (447)
.+.++|+.+.. +.+..++.+.|. ++||.+..+...+ ....+++|++..
T Consensus 322 g~~~~~v~~~~-~~~~~~~~~~l~~~~gi~v~pg~~f~---~~~~~~iRi~~~ 370 (389)
T PRK08068 322 GSFFAWMPVPK-GYTSEQFADLLLEKAHVAVAPGNGFG---EHGEGYVRVGLL 370 (389)
T ss_pred eeEEEEEECCC-CCCHHHHHHHHHHhCCEEEecchHhC---ccCCCeEEEEEc
Confidence 45667888753 456778888776 5799996542221 122468999974
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=8.7e-23 Score=199.33 Aligned_cols=319 Identities=15% Similarity=0.131 Sum_probs=215.0
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
...+.|..+++. +|+.+.+++.+.+......+|+.. . ...+ ++.++++++++++ +|.+++|+
T Consensus 22 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~------~-~~~l----r~~ia~~~~~~~~----~i~it~G~~ 86 (351)
T PRK14807 22 PYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDP------T-AEKL----REELARYCSVVPT----NIFVGNGSD 86 (351)
T ss_pred CceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCc------c-HHHH----HHHHHHHhCCCcc----cEEEecCHH
Confidence 345778888885 578999998776643212233221 1 2334 3567788898875 44558888
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.++++|||+|++.+|.|..+.. .....|. +++.++++ +++.+|+++++++++..++|+|+++
T Consensus 87 ~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 87 EIIHLIMLAFINKGDVVIYPHPSFAMYSV--------YSKIAGA--VEIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHHhhccCCCEEEEe
Confidence 77888888999999999999987764321 1233444 55666665 4578999999999976689999998
Q ss_pred CCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCccc--CCCCCceEEeecCCcc
Q 013217 177 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 250 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~ 250 (447)
.++||+ ..+.+++.++|++++.++++|+++. ++. .......+. ...+++.|++|++ +|.|.||++.++
T Consensus 156 ~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~---- 229 (351)
T PRK14807 156 NPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE---- 229 (351)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH----
Confidence 888886 7899999999999889999999963 332 111111111 1348889999986 688889999877
Q ss_pred hhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCCCCeeEEecC
Q 013217 251 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDL 329 (447)
Q Consensus 251 ~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~v~~ 329 (447)
++.+.+.....+.. .+.....++..+++. ..+++..+.+.++++.+.+.|.+ .|+.+..+ +..++|+.+
T Consensus 230 --~~~~~~~~~~~~~~---~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~--~~~~~~i~~ 299 (351)
T PRK14807 230 --NILKYLNLVKSPYN---INSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYPS--KTNFILVKF 299 (351)
T ss_pred --HHHHHHHHccCCCC---cCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC--CccEEEEEc
Confidence 67777765433321 222222223333332 33566677778888889999977 47776433 345677776
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
. +..++.+.|.++||.+.... .....++++|+++. + .++++++.+.|++++
T Consensus 300 ~----~~~~~~~~l~~~gV~v~~~~----~~~~~~~~iRis~~---~----~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 300 K----DADYVYQGLLERGILVRDFS----KVEGLEGALRITVS---S----CEANDYLINGLKELL 350 (351)
T ss_pred C----CHHHHHHHHHHCCEEEEECC----CCCCCCCeEEEEcC---C----HHHHHHHHHHHHHhh
Confidence 4 46778888888999996421 11112458999964 3 788999999987653
No 94
>PLN03032 serine decarboxylase; Provisional
Probab=99.92 E-value=2.4e-22 Score=194.59 Aligned_cols=317 Identities=15% Similarity=0.077 Sum_probs=214.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc--CC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--~p 109 (447)
..+.++++|..++.+.+ |+|...+..| ....++|+.+++++++++|++++++.. +.+++||+||..++.+.. .+
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g-~~a~~~e~~v~~~ia~llg~~~~~~~G-~fTsGGTEaNl~al~~ar~~~~ 110 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYG-VHSRQFEVGVLDWFARLWELEKDEYWG-YITTCGTEGNLHGILVGREVFP 110 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCC-ccHHHHHHHHHHHHHHHhCCCCccCCE-EEeCchHHHHHHHHHHHHHhCC
Confidence 34457888888776643 7787744323 235678889999999999998765311 334566799988776543 35
Q ss_pred CCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEc-CCC-CCCCCC
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAG-ASA-YPRDFD 185 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~-~~~-~~~~~~ 185 (447)
+++|+++..+|.+.. +.+...|.....+ +++ .++.+|+++|++++++. +|.+|+++ .++ .+...|
T Consensus 111 ~~~vi~s~~~H~Sv~--------kaa~~lg~~~~~V--~~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp 179 (374)
T PLN03032 111 DGILYASRESHYSVF--------KAARMYRMEAVKV--PTL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD 179 (374)
T ss_pred CcEEEeCCCceeHHH--------HHHHHcCCCCeEe--eeC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC
Confidence 678888887776653 2334455444444 465 56899999999999763 46777775 233 334889
Q ss_pred hHHHHHHHHHhC-----CEEEEehhhhccccccccCCCCC---CcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHH
Q 013217 186 YPRMRQIADAVG-----ALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 256 (447)
Q Consensus 186 ~~~i~~ia~~~g-----~~livD~a~~~g~~~~~~~~~~~---~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~ 256 (447)
+++|+++|+++| +|+++|+|++.+.++......++ ..+|.++.|+||+++.|.| |++++++ .+.+
T Consensus 180 i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~------~~~~ 253 (374)
T PLN03032 180 LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRK------KHVK 253 (374)
T ss_pred HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEc------hhhH
Confidence 999999999997 58999999877766532111111 1489999999998777999 9999998 3444
Q ss_pred Hhhhc------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCC
Q 013217 257 AINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 257 ~i~~~------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~ 330 (447)
.+... ..++..|+-+-...++++.+++....+++.+.+++..++++++.+.|++.|++++..+ ... ++.++
T Consensus 254 ~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p-~~~--~V~f~ 330 (374)
T PLN03032 254 ALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNE-LSS--TVVFE 330 (374)
T ss_pred hhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECC-Cce--EEEEc
Confidence 33210 1123456655566778888999888889999999999999999999999999877643 222 23333
Q ss_pred CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 331 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 331 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
... .+. +. .|..++. .+..+|+.++.-++ .+.++++++-|++
T Consensus 331 ~~~--~~~----~~-~~w~l~~----------~~~~~hi~vm~~~~----~~~id~fi~dl~~ 372 (374)
T PLN03032 331 RPM--DEA----FI-KKWQLAC----------EGDIAHVVVMPNVT----VEKLDEFVEELVE 372 (374)
T ss_pred CCC--cHh----Hh-heeeecc----------cCCEEEEEECCCCC----HHHHHHHHHHHhc
Confidence 321 111 21 3555532 12378988766555 6777777766543
No 95
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.92 E-value=2.7e-22 Score=198.70 Aligned_cols=341 Identities=16% Similarity=0.146 Sum_probs=217.0
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
...|+|..+++. .++.+.+++...+...+ ..|+. ......+++.+.+++.+.+|.....- -+|.+++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-SHYTG------MAGLLELRQAAADFVKEKYNLDYAPE-NEILVTIGAT 101 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChH
Confidence 345777666664 36778888876654321 12322 22235666666677776667631100 134457776
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEE
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII 174 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii 174 (447)
+++..++.+++++||+|++.+|.|+++.. .+...|. +++.++.+++++.+|+++++++++.. ++++|+
T Consensus 102 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~ 171 (391)
T PRK07309 102 EALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGA--EIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVI 171 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEE
Confidence 89999999999999999999998876531 2334454 55566565445679999999988642 588999
Q ss_pred EcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----cccEEEeCCCccc--CCCCCceEE
Q 013217 175 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL--RGPRGGMIF 243 (447)
Q Consensus 175 ~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----~~Di~~~s~~K~l--~Gp~gG~i~ 243 (447)
++.|+||+ .. ++++|.++|++||+++++|+++ ..+.+.+....++. ...+++.|++|.+ +|.|.|+++
T Consensus 172 l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v 250 (391)
T PRK07309 172 LNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVY-SELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIF 250 (391)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccc-cceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEE
Confidence 98778775 44 4789999999999999999996 44443221111111 1238889999986 677889999
Q ss_pred eecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCe
Q 013217 244 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 323 (447)
Q Consensus 244 ~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 323 (447)
.++ ++.+.+..... ....+++.....++..+++... .......+++.++++.+.+.|++.|+.+..+ ..+.
T Consensus 251 ~~~------~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p-~gg~ 321 (391)
T PRK07309 251 APA------EFTAQLIKSHQ-YLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDLGFKIIKP-DGAF 321 (391)
T ss_pred eCH------HHHHHHHHHHh-hcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CeeE
Confidence 987 67666665322 1112233333333333444311 1123455677788888999998888876543 3355
Q ss_pred eEEecCCCC-CCCHHHHHH-HHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 324 LVLVDLRPM-GIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 324 ~~~v~~~~~-~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
++|+.++.. ..+..++.+ .++++||.+..+... .+...++||+++.. + .+++++.++.|++++..
T Consensus 322 ~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f---~~~~~~~iRi~~~~--~----~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 322 YIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAF---GPYGEGYVRLSYAA--S----METIKEAMKRLKEYMEE 388 (391)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhh---CCCCCCEEEEEecC--C----HHHHHHHHHHHHHHHHh
Confidence 667776431 224556665 567899999543211 12235689998753 3 67888888888877753
No 96
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=3e-22 Score=198.30 Aligned_cols=334 Identities=14% Similarity=0.065 Sum_probs=215.4
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
...+.|-.+++. .++.+.+++.+.+.+.....| +......++++.+.+++.+.+|.. ++ +|.+|+|
T Consensus 29 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G 98 (386)
T PRK07550 29 GPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLY------GPVEGLPELREAYAAHYSRLYGAAISPE----QVHITSG 98 (386)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCC------CCCCCCHHHHHHHHHHHHHHhCCCCCcc----eEEEecC
Confidence 356788777764 367888888776532111122 211223466666667777777754 43 4455788
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~kli 173 (447)
+ +|+..++.++++|||+|++.+|.|.++.. .+...|. ++++++.++ .++.+|++++++++++ ++++|
T Consensus 99 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v 167 (386)
T PRK07550 99 CNQAFWAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGI--RPVYLPCDEGPGLLPDPAAAEALITP-RTRAI 167 (386)
T ss_pred cHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEecCCCcCCCCCHHHHHHHhcc-cCcEE
Confidence 6 89988999999999999999988766532 2234454 566666764 3567899999999987 89998
Q ss_pred EEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCC-CCC-----cccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PFK-----YCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~-~~~-----~~Di~~~s~~K~l--~Gp~gG 240 (447)
++..++||+ ..+ +++|.++|+++|+++|+|+++. .+...+..+. .+. .-.+++.|++|++ +|.|.|
T Consensus 168 ~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 246 (386)
T PRK07550 168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYR-DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVG 246 (386)
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCcchhhCCCccccEEEEecchhhccCcccceE
Confidence 887778875 444 7899999999999999999863 3332211111 111 1236789999987 478889
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 319 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 319 (447)
++++++ ++.+.+.........+. +.....++..++..+ ....++..+.+.++++.+.+.|.+. ++.+..
T Consensus 247 ~i~~~~------~~~~~~~~~~~~~~~~~-s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-- 316 (386)
T PRK07550 247 AVVASP------ARIAEIEKFMDTVAICA-PRIGQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPGWELLA-- 316 (386)
T ss_pred eeecCH------HHHHHHHHHHhhcccCC-CcHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCC--
Confidence 999987 66666655433322222 223333333344332 1223455667778888888998874 665433
Q ss_pred CCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 320 ~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
+..++.|+.+...+.+..++...| +++||.+..+...+ .....++|+++.. .+ ++++++..+.|.+
T Consensus 317 ~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~~-~~----~~~~~~~~~~l~~ 383 (386)
T PRK07550 317 SGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFG---PGQEGYLRLAFAN-AD----VAGIGELVERLRA 383 (386)
T ss_pred CceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhC---CCCCCEEEEEeec-CC----HHHHHHHHHHHHh
Confidence 345677887754356777877765 67899996542221 1124589999753 23 7888888887765
No 97
>PRK08912 hypothetical protein; Provisional
Probab=99.92 E-value=2.3e-22 Score=199.08 Aligned_cols=338 Identities=16% Similarity=0.124 Sum_probs=216.6
Q ss_pred cCeeEecCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcH
Q 013217 21 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 96 (447)
Q Consensus 21 ~~i~l~~~~n--~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs 96 (447)
..++|..+.. ..|+.+.+++...+.+.. .+|+.. ....++.+...+++.+.+|.+ ++ .+|..|+|+
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~~------~G~~~lr~~ia~~~~~~~g~~~~~~---~~i~~t~G~ 96 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPPM------MGLPELRQAVAAHYARFQGLDLDPE---TEVMVTSGA 96 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC------CCcHHHHHHHHHHHHHHhCCCCCCc---ccEEEeCCc
Confidence 4577764443 236777777766554321 233332 223355555566777777754 43 134447775
Q ss_pred -HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 013217 97 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 175 (447)
Q Consensus 97 -~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~ 175 (447)
+++..++.++++|||+|++.+|.|+++.. .+...|. +++.++++++++.+|++++++.+.. ++|+|++
T Consensus 97 ~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l 165 (387)
T PRK08912 97 TEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGG--VPRLVRLEPPHWRLPRAALAAAFSP-RTKAVLL 165 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccCcCCHHHHHHHhCc-cceEEEE
Confidence 89888999999999999999998766431 2334454 5555556545678999999998876 8999998
Q ss_pred cCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC---C---CcccEEEeCCCccc--CCCCCceE
Q 013217 176 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---KYCDVVTTTTHKSL--RGPRGGMI 242 (447)
Q Consensus 176 ~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~---~~~Di~~~s~~K~l--~Gp~gG~i 242 (447)
+.++||+ ..+ +++|.++|+++|+++++|+++. .+.+.+....+ + ...+++++|++|.+ +|.|.|++
T Consensus 166 ~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 244 (387)
T PRK08912 166 NNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV 244 (387)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEE
Confidence 8888886 454 6778999999999999999964 33332211111 1 12468999999986 57778999
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCC
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 322 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 322 (447)
++++ ++.+.+.........+.+...+ .++..++... ...+++..+++.++++.+.+.|.+.|+++..+ ..+
T Consensus 245 ~~~~------~~~~~l~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~g~ 315 (387)
T PRK08912 245 CAAP------PLLRVLAKAHQFLTFTTPPNLQ-AAVAYGLGKP-DDYFEGMRADLARSRDRLAAGLRRIGFPVLPS-QGT 315 (387)
T ss_pred ecCH------HHHHHHHHHHhhccccCChHHH-HHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Ccc
Confidence 9987 6766665433222222222222 2333344321 22346677888899999999999888876543 346
Q ss_pred eeEEecCCCC--CCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 323 HLVLVDLRPM--GIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 323 ~~~~v~~~~~--~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+++|+++.+. ..+..++.+.| +++||.+..+...+... ...+++|+++.. . ++++++..+.|.+.++
T Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~-~~~~~iRl~~~~--~----~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 316 YFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEED-PVTSVVRFCFAK--R----DATLDEAVERLAAARR 385 (387)
T ss_pred eEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCC-CCCCEEEEEEeC--C----HHHHHHHHHHHHHHHh
Confidence 6778887642 23566676665 67899996542211111 124689999763 2 6777777777766654
No 98
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=1.4e-22 Score=197.89 Aligned_cols=320 Identities=13% Similarity=0.071 Sum_probs=209.1
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcH-HHHHHHHHHhc
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-PANFEVYTAIL 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs-~a~~~~~~al~ 107 (447)
..++.+.+++.+.... ...|+.. +....+++.+.+++.+.+|.+ ++ -+|.+|+|+ +++..++.+++
T Consensus 13 ~~~~~~~~~~~~~~~~--~~~Y~~~------~G~~~lr~aia~~~~~~~g~~~~~~---~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 13 PTPPFIRKALIDAVPE--VSQYPSA------LGTKALREAISGWFERRFGVKLDPD---AQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred CCCHHHHHHHHHHHhc--cCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCCC---CcEEEcCChHHHHHHHHHHHc
Confidence 3478888888765432 2233322 223355555566777766754 42 145569998 89888989999
Q ss_pred CCC---CEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-
Q 013217 108 KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYPR- 182 (447)
Q Consensus 108 ~pg---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~klii~~~~~~~~- 182 (447)
+|| |+|++.+|.|.++.. .+...|. +++++++++ +++.+|++++++++.+ ++|+|+++.++||+
T Consensus 82 ~~g~~~d~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG 150 (350)
T TIGR03537 82 DPEEDRRRVIFGTPGYPVYER--------GALFAGG--EPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTG 150 (350)
T ss_pred CCCCCCceEEEcCCCCcchHH--------HHHhcCC--EEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcC
Confidence 988 699999988766532 2345554 666666653 3456999999999877 89999998888886
Q ss_pred -CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC--C-cccEEEeCCCccc--CCCCCceEEeecCCcchhh
Q 013217 183 -DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--K-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVE 253 (447)
Q Consensus 183 -~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~--~-~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~ 253 (447)
..+ +++|.++|+++|+++|+|+++.. +...+...+.. . ...+++.|++|++ +|.|.|+++.++ +
T Consensus 151 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~------~ 223 (350)
T TIGR03537 151 ATAPRSYLKETIAMCREHGIILCSDECYTE-IYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDE------K 223 (350)
T ss_pred cccCHHHHHHHHHHHHHcCcEEEEeccccc-cccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCH------H
Confidence 566 78999999999999999999642 22222111111 1 1247888999986 577889998776 6
Q ss_pred HHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCC
Q 013217 254 LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 333 (447)
Q Consensus 254 ~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~ 333 (447)
+.+.+.........+++...+. ++..++. .....++..+++.++.+.+.+.|.+.|+++..+ ..+.++|+++.. +
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~-~g~~~~~~~~~~-~ 298 (350)
T TIGR03537 224 LISFLRKLRANFGVASPDFVQA-AAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP-DATFYLWVKVPS-G 298 (350)
T ss_pred HHHHHHHHHHhhccCCCHHHHH-HHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeEEEEEEECCC-C
Confidence 7666665433322333322222 2222332 122335667778888888999998888876543 345667888753 4
Q ss_pred CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 334 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 334 ~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+..++.+.|.++||.+..+...+ .....++|+++. .+ ++++++..+.|++
T Consensus 299 ~~~~~l~~~L~~~gv~v~~g~~f~---~~~~~~~Ri~~~--~~----~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 IDAKDYALRLLENGIVVAPGENFG---SGEEGYVRVALV--PT----LEECEEALRLWER 349 (350)
T ss_pred CCHHHHHHHHHHCCEEEcCchhhC---CCCCCEEEEEec--CC----HHHHHHHHHHHhc
Confidence 567788888888999996532221 112468999863 33 7788777766653
No 99
>PRK07777 aminotransferase; Validated
Probab=99.92 E-value=2.7e-22 Score=198.63 Aligned_cols=341 Identities=16% Similarity=0.146 Sum_probs=214.0
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
...++|..+... .++.+.+++...+.... .+|+. .....++++.+.+++.+.+|.+.+.- -+|..|+|+
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~ 95 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP------GPGIPELRAAIAAQRRRRYGLEYDPD-TEVLVTVGAT 95 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcH
Confidence 356787654432 35667777666554321 12322 22234566555667777788762110 023346665
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC--CCCCCHHHHHHHhhhhCCcEEE
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLII 174 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~id~~~l~~~~~~~~~klii 174 (447)
+|+.+++.+++++||+|++..|.|+++.. .+...|. +++.++++++ ++.+|++++++.+.+ ++++|+
T Consensus 96 ~al~~~~~~~~~~gd~vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~ 164 (387)
T PRK07777 96 EAIAAAVLGLVEPGDEVLLIEPYYDSYAA--------VIAMAGA--HRVPVPLVPDGRGFALDLDALRAAVTP-RTRALI 164 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHCCC--EEEEeecCCccCCCcCCHHHHHHhcCc-ccEEEE
Confidence 89998999999999999999988765421 2334454 4445555533 467999999998876 899999
Q ss_pred EcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC------CcccEEEeCCCccc--CCCCCce
Q 013217 175 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KYCDVVTTTTHKSL--RGPRGGM 241 (447)
Q Consensus 175 ~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~------~~~Di~~~s~~K~l--~Gp~gG~ 241 (447)
+++++||+ .. ++++|.++|+++|+++++|+++ .++.+.+....++ ...++++.|++|++ +|.|.|+
T Consensus 165 l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK07777 165 VNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY-EHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGW 243 (387)
T ss_pred EcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccc-hhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEE
Confidence 98788876 33 4789999999999999999996 4444322111111 13568999999987 4677799
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
+++++ ++.+.+.........+.+...+. +++.++... ....++..+.+.++++.+.+.|.+.|+++..+ ..
T Consensus 244 ~~~~~------~l~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~g 314 (387)
T PRK07777 244 ACGPA------PLIAAVRAAKQYLTYVGGAPFQP-AVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDS-AG 314 (387)
T ss_pred EecCH------HHHHHHHHHHhhcccCCCCHHHH-HHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCC-Cc
Confidence 99887 66666554322111112222222 223344322 23345667888899999999998888776543 34
Q ss_pred CeeEEecCCCCC-CCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMG-IDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 322 ~~~~~v~~~~~~-~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
++++|+.++..+ .++.++.+.| +++||.+..+...+...+...+++||++.. . ++++++..+.|.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~----~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 315 TYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--R----DDTLDEAIRRLRALR 384 (387)
T ss_pred ceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--C----HHHHHHHHHHHHHHh
Confidence 667777765322 3567777777 578999965432111111124589998752 3 778877777776543
No 100
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1.4e-22 Score=201.70 Aligned_cols=330 Identities=18% Similarity=0.192 Sum_probs=218.4
Q ss_pred EecCCCCC----CHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHH
Q 013217 25 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 99 (447)
Q Consensus 25 l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~ 99 (447)
...|.+|+ .|+|++++...+. +|..+..+.+...+ .+...++| +++++++|.+. .+.++||+.||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~An 118 (406)
T PRK13393 49 VWCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVSN 118 (406)
T ss_pred EeecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHH
Confidence 45677775 6899999988875 45555445544323 33445555 68899999754 34569999999
Q ss_pred HHHHHHhcC--CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---hCCcEEE
Q 013217 100 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 174 (447)
Q Consensus 100 ~~~~~al~~--pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~~~klii 174 (447)
..++.++.+ +||.|+.....|++.+. .+...|. +...++ ..|++++++.++. .++++|+
T Consensus 119 ~~ai~~l~~~~~g~~I~~~~~~H~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~ 182 (406)
T PRK13393 119 WAALSTLGSRLPGCVILSDELNHASMIE--------GIRHSRA--EKRIFR------HNDPADLERKLSDLDPHRPKLVA 182 (406)
T ss_pred HHHHHHhhcCCCCCEEEEccchhHHHHH--------HHHHcCC--eEEEeC------CCCHHHHHHHHHhccCCCCEEEE
Confidence 999988765 88888877777766542 1223343 222322 2477888877753 2567888
Q ss_pred EcCCCCC-C-CCChHHHHHHHHHhCCEEEEehhhhcccccc-c--cCC-CCC-CcccEEEeCCCcccCCCCCceEEeecC
Q 013217 175 AGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 247 (447)
Q Consensus 175 ~~~~~~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~-~--~~~-~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~~ 247 (447)
+++++++ + ..|+++|.++|+++|+++++|++|+.|+... + ... ..+ +..|+++.|++|.+++ .||++++++
T Consensus 183 ~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~- 260 (406)
T PRK13393 183 FESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSA- 260 (406)
T ss_pred EcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCH-
Confidence 8755444 3 7799999999999999999999998776432 1 110 111 1358898999999854 568888776
Q ss_pred CcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEE
Q 013217 248 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 326 (447)
Q Consensus 248 ~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 326 (447)
++.+.+.....+.. .++.+....++..++++.+.... ....+..++.+++.+.|.+.|++++.+ ...++.
T Consensus 261 -----~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~ 331 (406)
T PRK13393 261 -----ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPN--PSHIVP 331 (406)
T ss_pred -----HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCeEE
Confidence 66666655433322 33445555566666787664332 224566788899999998888876542 233444
Q ss_pred ecCCCCCCCHHHHHHHHhh-cCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+.+.. ..+..++.+.|.+ +||.++....|.. |...++||++++.+++ ++|++++++.|++++...
T Consensus 332 v~~~~-~~~~~~l~~~L~~~~Gi~v~~~~~p~~--p~g~~~iRis~~~~~t----~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 332 VMVGD-PVLCKQISDELLDRYGIYVQPINYPTV--PRGTERLRITPSPLHT----DADIEHLVQALSEIWARL 397 (406)
T ss_pred EEeCC-HHHHHHHHHHHHHhCCEEEEeECCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHhc
Confidence 43321 1234567777765 6999976433321 2234689999999988 999999999999887643
No 101
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.92 E-value=1.8e-23 Score=195.45 Aligned_cols=301 Identities=18% Similarity=0.129 Sum_probs=195.0
Q ss_pred CCCHHHHHHHHHHHHHhhcCee-EecCCC--CCCHHHHHHHhhhhhcc-CCCCCCCCcccCchhHHHHHHHHHHHHHHHH
Q 013217 3 ACNPEVCEIITKEKERQFKSLE-LIASEN--FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAA 78 (447)
Q Consensus 3 ~~~~~~~~~~~~e~~~~~~~i~-l~~~~n--~~~~~v~~a~~~~~~~~-~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~ 78 (447)
...|.||..+.+-..... ..+ |=.+.. ..|.-|.+++....... ..+++++ ||-. ++.+..++.++++
T Consensus 14 ~~~~~vw~e~~~la~e~~-~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~---~G~p----~L~~aL~k~~se~ 85 (420)
T KOG0257|consen 14 TSKPYVWTEINRLAAEHK-VPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG---YGLP----QLRKALAKAYSEF 85 (420)
T ss_pred ccCCcHHHHHHHHHHhcC-CCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc---CCch----HHHHHHHHHHHHH
Confidence 445666666664322222 122 444443 35677777776654331 1111222 2323 3333445677887
Q ss_pred cCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc-----cCCC
Q 013217 79 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-----LDES 152 (447)
Q Consensus 79 ~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~ 152 (447)
+|....-- -.|.+|+|+ +++..++++++++||+|++.+|.+.+++. .+.+.|....+++.. ....
T Consensus 86 ~~~~~~~~-~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~--------~~~maG~tpv~v~~~~~~g~~~s~ 156 (420)
T KOG0257|consen 86 YGGLLDPD-DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP--------QVVMAGGTPVFVPLKPKEGNVSSS 156 (420)
T ss_pred hccccCCc-ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhh--------HHhhcCCcceeeccccccccccCc
Confidence 87652100 245669998 89999999999999999999998877643 345667644555443 1135
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcccccccc-CCC--CCC---
Q 013217 153 TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK--- 221 (447)
Q Consensus 153 ~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~--~~~--- 221 (447)
++.+|+++++.++.+ |||+|++++|+||+ .. .+++|++||++||+++|+|+++ .-+++.+. +.. .++
T Consensus 157 ~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevY-e~~v~d~~~h~r~aslPgm~ 234 (420)
T KOG0257|consen 157 DWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVY-EWLVYDGNKHIRIASLPGMY 234 (420)
T ss_pred cccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHh-HHHhhCCCcceeeecCCchh
Confidence 689999999999998 99999999999986 33 5889999999999999999994 55565553 221 112
Q ss_pred cccEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc---Ch---hH-HH
Q 013217 222 YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ---SP---EF-KV 292 (447)
Q Consensus 222 ~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~---~~---~~-~~ 292 (447)
...+.++|++|++ .|||-||+++++ .+...............+...+ .|.+.|+...+ ++ .+ .+
T Consensus 235 ertitvgS~gKtf~~TGWrlGW~igp~------~L~~~~~~vh~~~~~~~~Tp~q-~A~a~a~~~~~~~~~p~~~y~~~~ 307 (420)
T KOG0257|consen 235 ERTITVGSFGKTFGVTGWRLGWAIGPK------HLYSALFPVHQNFVFTCPTPIQ-EASAAAFALELACLQPGGSYFITE 307 (420)
T ss_pred heEEEeccccceeeeeeeeeeeeechH------HhhhhHHHHhhccccccCcHHH-HHHHHHHhhhhhccCCcchhHHHH
Confidence 2457889999997 699999999955 4444433321111111222222 22233333222 12 23 44
Q ss_pred HHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCC
Q 013217 293 YQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~ 330 (447)
+.+.+.++++.|.+.|.+.|+++..+ ..++++|+|++
T Consensus 308 ~~~~y~~krdil~k~L~~lg~~v~~p-~gayyl~adfs 344 (420)
T KOG0257|consen 308 LVKEYKEKRDILAKALEELGLKVTGP-EGAYYLWADFS 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccC-CCceEEEEecc
Confidence 88999999999999999999998654 56788899987
No 102
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.92 E-value=7.3e-24 Score=206.76 Aligned_cols=282 Identities=18% Similarity=0.109 Sum_probs=193.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcHHHHHHHHHHhcC------------CC--CEEEEecCCCCccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK------------PH--DRIMGLDLPHGGHL 124 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs~a~~~~~~al~~------------pg--d~Vl~~~~~~~~~~ 124 (447)
......++|+.+++++++++|++ .+.. .+.+++|++||..++.++.. +| +.|++.++.|.++.
T Consensus 32 ~~~~~~~le~~~~~~~~~~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~ 109 (345)
T cd06450 32 ESPAATEMEAEVVNWLAKLFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE 109 (345)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH
Confidence 33456788999999999999986 3222 23456667999988887742 33 36777777766542
Q ss_pred CCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcEEEEcCCCCC-C-CCChHHHHHHHHHhC
Q 013217 125 SHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYP-R-DFDYPRMRQIADAVG 197 (447)
Q Consensus 125 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-----~~klii~~~~~~~-~-~~~~~~i~~ia~~~g 197 (447)
. .+...|. +++.+++++ ++.+|+++|++++++. +|++|+++.++++ + ..|+++|.++|+++|
T Consensus 110 ~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~ 178 (345)
T cd06450 110 K--------AAAYLDV--KVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYD 178 (345)
T ss_pred H--------HHHHHhc--CeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhC
Confidence 1 2233344 455555653 4589999999998752 6778777755544 3 779999999999999
Q ss_pred CEEEEehhhhccccccccCC---CCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHH
Q 013217 198 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNH 273 (447)
Q Consensus 198 ~~livD~a~~~g~~~~~~~~---~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~ 273 (447)
+++++|++|+.+........ ..+.++|++++|+|||+.+|.| |+++++
T Consensus 179 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~---------------------------- 230 (345)
T cd06450 179 LWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR---------------------------- 230 (345)
T ss_pred CeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----------------------------
Confidence 99999999977765332111 1123589999999999988776 765432
Q ss_pred HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCeeEEecCCCC---CCCHHHHHHHHhhcCeE
Q 013217 274 TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPM---GIDGARVEKILDMASIT 349 (447)
Q Consensus 274 ~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~L~~~gI~ 349 (447)
..+++.+++.+...++++..++..+.++++.+.|.+. +++++.+ .+..++.+.+.+. +++..++.+.|.++|+.
T Consensus 231 -~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~ 308 (345)
T cd06450 231 -ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE-PNLSLVCFRLKPSVKLDELNYDLSDRLNERGGW 308 (345)
T ss_pred -HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CceeEEEEEECCcchhhHHHHHHHHHHHhcCCE
Confidence 3344556666666678888999999999999999884 7777643 2344455554432 34556788889888654
Q ss_pred EccCCCCCCCCCCCCCeEEEecCcc-ccCCCCHHHHHHHHHHHHH
Q 013217 350 LNKNSVPGDKSALVPGGIRIGSPAM-TTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 350 v~~~~~p~~~~~~~~~~iRig~~~~-~~~g~~~~di~~l~~~i~~ 393 (447)
+... ...+ .+..+|++++.. |+ ++|++++++.|++
T Consensus 309 ~~~~----~~~~-~~~~lRis~~~~~~t----~~di~~l~~~l~~ 344 (345)
T cd06450 309 HVPA----TTLG-GPNVLRFVVTNPLTT----RDDADALLEDIER 344 (345)
T ss_pred EEEe----eEEC-CeEEEEEEecCCCCC----HHHHHHHHHHHHh
Confidence 4221 1101 245899998875 46 9999999998865
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=4.1e-23 Score=201.51 Aligned_cols=314 Identities=18% Similarity=0.169 Sum_probs=211.5
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
..|+|..++|. +||.+++++...+... .+|+.. . ..++ ++.+++++++++++ |.+++|+ +
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~~~------~-~~~l----r~~ia~~~~~~~~~----i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYPDP------D-PAEL----KQALADYYGVDPEQ----ILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCCCC------C-HHHH----HHHHHHHhCcChHH----EEEcCCHHH
Confidence 45778777764 5788999998765321 223221 1 1234 46788889987653 4447776 7
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
++..++.+++++||+|++.+|.|+.+.. .....|. +++.+++++ ++.+|++++++.+.+ ++++|+++.
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~~~~-~~~~v~l~~ 150 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYEI--------SAKIHGA--EVVKVPLDE-DGQLDLEDILVAIDD-KPKLVFLCS 150 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEeccCC-CCCCCHHHHHHhcCC-CCCEEEEeC
Confidence 8888888999999999999987654311 1223343 555666663 478999999998765 899999987
Q ss_pred CCCCC--CCChHHHHHHHHHh--CCEEEEehhhhccccccccCCCCCC--cccEEEeCCCccc--CCCCCceEEeecCCc
Q 013217 178 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 249 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~~--g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~ 249 (447)
++||+ ..+.+++.++|+.+ |+++++|++|. ++...+....... ..+++++|+||++ +|+|.|++++++
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--- 226 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--- 226 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH---
Confidence 77776 78999999999887 99999999975 3332210000000 1347789999998 367779999987
Q ss_pred chhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCeeEEec
Q 013217 250 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVD 328 (447)
Q Consensus 250 ~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~ 328 (447)
++.+.+.....+. +.+.....+...+++.. ..+++..+++.++++.+.+.|++. |+++..+ ...++|++
T Consensus 227 ---~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~g~~~~~~ 296 (346)
T TIGR01141 227 ---EIIDALNKVRAPF---NLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYPS--DANFVLIR 296 (346)
T ss_pred ---HHHHHHHhccCCC---CCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC--cCCEEEEe
Confidence 6777776543222 22333333333334322 135677888889999999999885 8876542 34567777
Q ss_pred CCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 329 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 329 ~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
+.. +.+++.+.|.++||.+..+...+ .. ++.+|++++ + ++|++++++.|
T Consensus 297 ~~~---~~~~~~~~L~~~gI~v~~g~~f~---~~-~~~iRls~~---~----~~~i~~~~~~l 345 (346)
T TIGR01141 297 FPR---DADALFEALLEKGIIVRDLNSYP---GL-PNCLRITVG---T----REENDRFLAAL 345 (346)
T ss_pred cCC---CHHHHHHHHHHCCeEEEeCCCcC---CC-CCeEEEecC---C----HHHHHHHHHHh
Confidence 753 56888889989999996532111 11 568999954 4 89999998876
No 104
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=5.7e-22 Score=196.22 Aligned_cols=331 Identities=15% Similarity=0.124 Sum_probs=210.7
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcH
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 96 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs 96 (447)
+.++|..+++. +++.+.+++...+.......|+.. .....+.+.+.+++.+.+|.+ +++ +|.+|+|+
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~g~~~~~~~---~ii~t~G~ 102 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSY------EGMLEFRKAVADWYKRRFGVELDPET---EVISLIGS 102 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC------CCcHHHHHHHHHHHHHHhCCCCCCCC---cEEEccCc
Confidence 45788777764 467888888776643211233322 112345555556777666753 331 24457887
Q ss_pred -HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEEE
Q 013217 97 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 174 (447)
Q Consensus 97 -~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~klii 174 (447)
+++..++.++++|||+|++.+|.|+.+.. .....|. +++.++++.+ ++.+|++++++.+.+ ++++|+
T Consensus 103 ~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~ 171 (385)
T PRK09276 103 KEGIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGG--EPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMF 171 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEE
Confidence 88888899999999999999998765421 2234454 5555556533 456899999988876 899999
Q ss_pred EcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC---CC---cccEEEeCCCccc--CCCCCce
Q 013217 175 AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGM 241 (447)
Q Consensus 175 ~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~~---~~Di~~~s~~K~l--~Gp~gG~ 241 (447)
+++|+||+ ..+ +++|.++|+++|+++++|+++. .+.+.+....+ ++ ...+++.|++|.+ +|.|.|+
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 172 INYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhhee
Confidence 99888886 555 5788889999999999999964 33332211111 11 2347889999987 5777899
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
+++++ ++.+.+......... +.+.....+...++... ....++..+++.++++.+.+.|++.|+++..+ ..
T Consensus 251 ~i~~~------~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~ 321 (385)
T PRK09276 251 AVGNA------DLIAGLGKVKSNVDS-GVFQAIQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP-KA 321 (385)
T ss_pred eeCCH------HHHHHHHHHHhhccC-CCCHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Cc
Confidence 99887 677766553322112 22222223333344321 22346667777888899999999888876543 34
Q ss_pred CeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
+.++|+++.. +++..++.+.| +++||.+..+...+ ...++++||++. .. ++++....+.|
T Consensus 322 ~~~~~v~~~~-~~~~~~l~~~ll~~~gi~v~~g~~f~---~~~~~~~Ris~~--~~----~~~l~~~l~~l 382 (385)
T PRK09276 322 TFYVWAPVPK-GYTSAEFATLLLDKAGVVVTPGNGFG---EYGEGYFRIALT--VP----DERIEEAVERI 382 (385)
T ss_pred ceEEEEECCC-CCCHHHHHHHHHHhCCEEECCchhhC---CCCCCeEEEEeC--CC----HHHHHHHHHHH
Confidence 5667888753 45677776665 57899996532111 112458999974 22 56655555544
No 105
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.92 E-value=1.2e-23 Score=205.34 Aligned_cols=328 Identities=15% Similarity=0.100 Sum_probs=207.4
Q ss_pred eeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCc-ccC---chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHH
Q 013217 23 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYG---GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 98 (447)
Q Consensus 23 i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~-~~~---g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a 98 (447)
+++.|++..+|+.|++++..++.+ |. +++.. |.. ..++.+.++ .+++.++++||++.++. +.+...|||.+
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~~~-vvf~~gs~T~a 75 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDNYK-VLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCchHH
Confidence 467899999999999999998754 32 33321 111 234445554 68899999999843322 22333557899
Q ss_pred HHHHHHHhcC---CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCC-HHHHHHHhhhhCCcEEE
Q 013217 99 NFEVYTAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD-YDMLEKTAILFRPKLII 174 (447)
Q Consensus 99 ~~~~~~al~~---pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id-~~~l~~~~~~~~~klii 174 (447)
+.+++.+++. +||+|++.. +.+.+. ...+..|..++.++ .+++....+ ++..+..+++ ++++|.
T Consensus 76 ~~~~~~~l~~~~~~~~~i~~g~------~~~~~~---~~a~~~g~~~~~~~--~~~~g~~~~~~~~~~~~~~~-~~~lV~ 143 (355)
T cd00611 76 FAAVPLNLLGDKGTADYVVTGA------WSAKAA---KEAKRYGGVVVIVA--AKEEGKYTKIPDVETWDLAP-DAAYVH 143 (355)
T ss_pred HHHHHHhcCCCCCeEEEEECCH------HHHHHH---HHHHhcCCCcEEEe--cccccCCCCCCCHhhcCCCC-CCCEEE
Confidence 9999999987 555555422 111110 01122344344444 332211223 2222233444 899998
Q ss_pred EcCCCCC-CCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchh
Q 013217 175 AGASAYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 252 (447)
Q Consensus 175 ~~~~~~~-~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~ 252 (447)
+++..+. +.. + .++++.+|+++++|++|++|.++.++.. .|++++|.||+| ||.| |++++++
T Consensus 144 ~~h~~t~tG~~-~---~~i~~~~g~~~~VDa~qs~g~~~idv~~-----~~~~~ss~~K~l-GP~G~g~l~~~~------ 207 (355)
T cd00611 144 YCSNETIHGVE-F---DEVPDTGGVPLVADMSSNILSRPIDVSK-----FGVIYAGAQKNL-GPAGVTVVIVRK------ 207 (355)
T ss_pred EeCCcccccEE-c---ceecccCCCeEEEEccccccCCCCCHHH-----hCEEEeeccccc-CCCceEEEEECH------
Confidence 8754444 332 2 2455669999999999999977554432 456777799976 7999 9999988
Q ss_pred hHHHHhhhc-----------cCCCCCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC
Q 013217 253 ELESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 319 (447)
Q Consensus 253 ~~~~~i~~~-----------~~~~~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 319 (447)
+..+++... ......|||+.+.+.++.+|++++... +++.+.++..+.++++.+.|++. |+......
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~ 287 (355)
T cd00611 208 DLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVD 287 (355)
T ss_pred HHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCC
Confidence 444333221 001125899999999999999999887 79999999999999999999996 75211111
Q ss_pred CCCee-EEecCCCCCC-CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 320 SDNHL-VLVDLRPMGI-DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 320 ~~~~~-~~v~~~~~~~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
...+. .++.+...+. ...++...+.+.|+... +++. ..+.+|+|+..++| ++|++++.++|+++
T Consensus 288 ~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~----~~~~---~~g~vR~S~~~~nt----~edi~~l~~al~~~ 353 (355)
T cd00611 288 KRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGL----KGHR---SVGGIRASIYNALS----LEGVQALADFMKEF 353 (355)
T ss_pred HHHcCceEEEEEcCChhhhHHHHHHHHHCCCccc----CCCc---ccCeEEEEccCCCC----HHHHHHHHHHHHHH
Confidence 11122 2233332232 11344456677899632 2222 13579999999999 99999999999874
No 106
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=8.9e-23 Score=199.70 Aligned_cols=318 Identities=20% Similarity=0.187 Sum_probs=215.2
Q ss_pred hcCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
++.|+|..++|+. ++.+++++.+.+.... ..||.. + ...+ ++.++++++++++ +|.+|+|+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~---~~~l----r~aia~~~~~~~~----~I~it~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----N---ADAL----RQAIAAYYGLDPE----QVFVGNGSD 87 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----c---HHHH----HHHHHHHhCCCHH----HEEEcCCHH
Confidence 3568898888854 6788999887654321 234321 1 1233 4677888898876 34558888
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.++++|||+|++++|.|+.+.. .....|. +++.++++ +++.+|++++++ ++++|+++
T Consensus 88 ~al~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~-----~~~~v~~~ 151 (353)
T PRK05387 88 EVLAHAFLAFFNHDRPLLFPDITYSFYPV--------YAGLYGI--PYEEIPLD-DDFSIDVEDYLR-----PNGGIIFP 151 (353)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCHHHHHH--------HHHHcCC--EEEEeecC-CCCCCCHHHHHh-----cCCEEEEe
Confidence 89999999999999999999988754321 1234454 55555565 457899998863 45788888
Q ss_pred CCCCCC--CCChHHHHHHHHHh-CCEEEEehhhhccccccccCCCCC-C--cccEEEeCCCccc--CCCCCceEEeecCC
Q 013217 177 ASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPF-K--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 248 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~~~-g~~livD~a~~~g~~~~~~~~~~~-~--~~Di~~~s~~K~l--~Gp~gG~i~~~~~~ 248 (447)
+|+||+ ..+.+++.++++.+ ++++++|+++. .+. +....++ . ...++++|++|++ +|.|.|+++.++
T Consensus 152 ~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-- 226 (353)
T PRK05387 152 NPNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFG--GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP-- 226 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccC--CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH--
Confidence 888886 77999999999876 99999999963 221 1101111 1 2358899999985 688889999877
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEec
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 328 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~ 328 (447)
++.+.+..........+.+.....++..++.. ...+++..+++.++++.+.+.|++.|+.+..+ ..+++|+.
T Consensus 227 ----~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~ 298 (353)
T PRK05387 227 ----ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPS--KANFVFAR 298 (353)
T ss_pred ----HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC--cCcEEEEE
Confidence 67777665432211223344333333334432 12346677888889999999999988876532 34556766
Q ss_pred CCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 329 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 329 ~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+. +.+..++.+.|.++||.+.... . +...+.+|+++. + +++++++.++|++++.
T Consensus 299 ~~--~~~~~~~~~~l~~~gi~v~~~~---~--~~~~~~iRis~~---~----~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 299 HP--SHDAAELAAKLRERGIIVRHFN---K--PRIDQFLRITIG---T----DEEMEALVDALKEILA 352 (353)
T ss_pred CC--CCCHHHHHHHHHHCCEEEEECC---C--CCCCCeEEEEeC---C----HHHHHHHHHHHHHHhh
Confidence 54 3467788888999999996321 1 112468999864 3 7899999999988764
No 107
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.92 E-value=3.6e-22 Score=197.41 Aligned_cols=333 Identities=12% Similarity=0.083 Sum_probs=210.0
Q ss_pred hcCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCc
Q 013217 20 FKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sG 95 (447)
...++|..+++.. ++.+++++...+... ...|+.. .....+.+.+.+++.+.+|. +++ +|.+|+|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~------~G~~~lr~~ia~~~~~~~~~~~~~~----~i~it~G 97 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKG-HTRYTDS------GGDVELIEEIIKYYSKNYDLSFKRN----EIMATVG 97 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCC------CCcHHHHHHHHHHHHHHhCCCCChh----hEEEcCC
Confidence 4568887776643 466666554433221 1223322 22234555555667665554 454 4555888
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.++++|||+|++.+|.|+++.. .+...|. ++++++.++ +++.+|++++++.+++ ++++|
T Consensus 98 ~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 166 (384)
T PRK06348 98 ACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGG--KPIILETYEEDGFQINVKKLEALITS-KTKAI 166 (384)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEecCCcCcCCcCCHHHHHHhhCc-CccEE
Confidence 7 89999999999999999999998876532 2334454 455555532 4567999999998876 89999
Q ss_pred EEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCC--CCC---cccEEEeCCCccc--CCCCCce
Q 013217 174 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCDVVTTTTHKSL--RGPRGGM 241 (447)
Q Consensus 174 i~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~~~---~~Di~~~s~~K~l--~Gp~gG~ 241 (447)
+++.++||+ .. ++++|.++|+++|+++++|+++ .++.+.+.... .+. ...+++.|++|++ +|.|.|+
T Consensus 167 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~ 245 (384)
T PRK06348 167 ILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVY-DGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGY 245 (384)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccc-ccceeCCCccchhhcCCCcCcEEEEecchhccCCcccccee
Confidence 988888886 44 3688888999999999999995 44443321111 111 2347889999986 5888999
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 320 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 320 (447)
+++++ ++.+.+.........+. +.....++..++... ....++..+.+.++++.+.+.|.+. ++.+..+ .
T Consensus 246 ~v~~~------~~~~~~~~~~~~~~~~~-~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p-~ 316 (384)
T PRK06348 246 VIAPD------YIIETAKIINEGICFSA-PTISQRAAIYALKHR-DTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPP-K 316 (384)
T ss_pred eecCH------HHHHHHHHHHHhccCCC-CHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceeccC-C
Confidence 99987 67776655432222222 222223333344421 1223455666777788888888774 5555432 3
Q ss_pred CCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+.++|++++..+++..++.+.| +++||.+..+...+ ....+++|+++. .+ ++++++..+.|++
T Consensus 317 gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~----~~~l~~al~~l~~ 381 (384)
T PRK06348 317 GSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFG---ESGEGYIRLACT--VG----IEVLEEAFNRIEK 381 (384)
T ss_pred eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhc---cCCCCeEEEEec--CC----HHHHHHHHHHHHh
Confidence 46667888764456777777765 57899996432221 112468999974 23 6777666666543
No 108
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=3.6e-22 Score=201.40 Aligned_cols=336 Identities=16% Similarity=0.165 Sum_probs=218.8
Q ss_pred cCeeEecCCCC----CCHHHHHHHhhhhhccCCCCCCCCcc-cCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc
Q 013217 21 KSLELIASENF----TSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~n~----~~~~v~~a~~~~~~~~~~~g~~~~~~-~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG 95 (447)
..|+|. +.++ .+|.+.+++...+. +|..|+.+.|. |+..+...++| ++++++++.+. .|..++|
T Consensus 110 ~~id~~-s~~~lgl~~~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G 178 (481)
T PLN02822 110 DVVNFA-SANYLGLIGNEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYG 178 (481)
T ss_pred eEEEeE-CCCcCCCCCCHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCH
Confidence 446664 4444 47999999988775 45667777654 45555555665 68899999764 3445788
Q ss_pred HHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh--------
Q 013217 96 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-------- 167 (447)
Q Consensus 96 s~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~-------- 167 (447)
..++.+++.+++++||.|++....|.++. ..+.+++. +++.++.+ |.++++..+++
T Consensus 179 ~~a~~sai~a~~~~gd~Ii~d~~~H~s~~--------~~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~~ 242 (481)
T PLN02822 179 LSTIFSVIPAFCKKGDIIVADEGVHWGIQ--------NGLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKRK 242 (481)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCccHHHH--------HHHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhccc
Confidence 77889999999999999998766554431 12334444 44454443 34444443321
Q ss_pred hCC-cEEEEcCC--CCCCCCChHHHHHHHHHhCCEEEEehhhhcccccc-c--cC-CCCC--CcccEEEeCCCcccCCCC
Q 013217 168 FRP-KLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF--KYCDVVTTTTHKSLRGPR 238 (447)
Q Consensus 168 ~~~-klii~~~~--~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~-~--~~-~~~~--~~~Di~~~s~~K~l~Gp~ 238 (447)
.++ ++|++.+. +.+...|+++|+++|++||+++++|++|+.|.... + .. ...+ ...|++++|++|++ |..
T Consensus 243 ~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~ 321 (481)
T PLN02822 243 KKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATE 321 (481)
T ss_pred CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhC
Confidence 134 57777633 23337899999999999999999999998776532 1 10 0111 24789999999998 466
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCC--CcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEe
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGG--PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 315 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~--p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 315 (447)
||++++++ ++.+.+......+..++ |.....+++ .+++.+.. ..+..+++.++++.+.+.|.+. |+++
T Consensus 322 GG~i~g~~------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~-~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~ 392 (481)
T PLN02822 322 GGFCTGSA------RVVDHQRLSSSGYVFSASLPPYLASAAI-TAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSI 392 (481)
T ss_pred CeEEEcCH------HHHHHHHhcCCceeeccccCHHHHHHHH-HHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 79999887 67776654333333333 233333333 47765432 3567889999999999999884 8876
Q ss_pred eeCCCCCeeEEecCCCC-CC---C---HHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 316 VSGGSDNHLVLVDLRPM-GI---D---GARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 316 ~~~~~~~~~~~v~~~~~-~~---~---~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
..+ ..+.++++.+... +. + ..++.+.| .++||.+.....|.-.....+.++|++++..++ ++|++++
T Consensus 393 ~~~-~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t----~edI~~~ 467 (481)
T PLN02822 393 GSN-TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHT----ESDILKA 467 (481)
T ss_pred CCC-CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCC----HHHHHHH
Confidence 543 3466666776432 10 1 24566665 588999975322321111123579998777676 9999999
Q ss_pred HHHHHHHHHHH
Q 013217 388 ADFIHEGVEIT 398 (447)
Q Consensus 388 ~~~i~~~l~~~ 398 (447)
++.|++++...
T Consensus 468 ~~~l~~~~~~~ 478 (481)
T PLN02822 468 SESLKRVAASV 478 (481)
T ss_pred HHHHHHHHHHH
Confidence 99999887753
No 109
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=2e-22 Score=200.63 Aligned_cols=344 Identities=15% Similarity=0.068 Sum_probs=217.0
Q ss_pred hhcCeeEecCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceee
Q 013217 19 QFKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 90 (447)
Q Consensus 19 ~~~~i~l~~~~n------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v 90 (447)
.+..|+|..+++ .+|+.+++++.+.+......+|... .....+++...+++.+.+|. +++ +|
T Consensus 30 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~~ia~~~~~~~g~~~~~~----~i 99 (409)
T PLN02656 30 GKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPT------VGLPQARRAIAEYLSRDLPYKLSLD----DV 99 (409)
T ss_pred CCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCC------CCCHHHHHHHHHHHHHhcCCCCCcc----cE
Confidence 356788876666 3478999998877664322334221 11234554445566655554 344 34
Q ss_pred ecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhh
Q 013217 91 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF 168 (447)
Q Consensus 91 ~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~ 168 (447)
.+++|+ +++..++.++++|||+|++.+|.|+.+.. .....|. +++.+++++ +++.+|++++++++++
T Consensus 100 ~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~- 168 (409)
T PLN02656 100 FITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL--------CAAFRHL--EVRYVDLLPEKGWEVDLDAVEALADQ- 168 (409)
T ss_pred EEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH--------HHHHcCC--EEEEEeCCCcCCCCCCHHHHHHHhcc-
Confidence 457776 89988999999999999999998765421 1233454 445555543 3567999999998876
Q ss_pred CCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---Cc--ccEEEeCCCccc--CC
Q 013217 169 RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RG 236 (447)
Q Consensus 169 ~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~~--~Di~~~s~~K~l--~G 236 (447)
++++|+++.|+||+ .. ++++|.++|+++|+++++|+++ .++.+.+....++ .. .-+++.|++|++ +|
T Consensus 169 ~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG 247 (409)
T PLN02656 169 NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVY-GHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPG 247 (409)
T ss_pred CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhh-hhcccCCCCcccHHHhcccCcEEEEcccchhccCcc
Confidence 78888888788886 32 6789999999999999999995 4555433211121 11 237789999984 68
Q ss_pred CCCceEEeecCCc-c-hhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-Cc
Q 013217 237 PRGGMIFFKKDPV-L-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GY 313 (447)
Q Consensus 237 p~gG~i~~~~~~~-~-~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 313 (447)
.|.||++.+++.. . -.++.+++...... .++++.....++..+++......+++..+++.++++.+.+.|++. ++
T Consensus 248 lRiG~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~ 325 (409)
T PLN02656 248 WRLGWFVTTDPSGSFRDPKIVERIKKYFDI--LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCI 325 (409)
T ss_pred eeEEEEEEeCcccccccHHHHHHHHHHHhh--hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 8889999852100 0 01455555543222 123344444444445543222235667778888888999999875 33
Q ss_pred EeeeCCCCCeeEEecCCCC---CC-CH-HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHH
Q 013217 314 KLVSGGSDNHLVLVDLRPM---GI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 388 (447)
Q Consensus 314 ~~~~~~~~~~~~~v~~~~~---~~-~~-~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~ 388 (447)
.....+..+.++|+++... +. +. +.+.+.|.+.||.+..+ .... .++++||++.. + ++++++..
T Consensus 326 ~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg----~~fg-~~~~iRi~~~~--~----~e~l~eal 394 (409)
T PLN02656 326 TCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPG----TAVG-LKNWLRITFAA--D----PSSLEEAL 394 (409)
T ss_pred cCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecc----hhcC-CCCeEEEEeCC--C----HHHHHHHH
Confidence 3222234466778887421 11 23 34567888999999543 3211 24689999763 3 78888888
Q ss_pred HHHHHHHHH
Q 013217 389 DFIHEGVEI 397 (447)
Q Consensus 389 ~~i~~~l~~ 397 (447)
+.|++++..
T Consensus 395 ~rl~~~~~~ 403 (409)
T PLN02656 395 GRIKSFYLR 403 (409)
T ss_pred HHHHHHHHH
Confidence 888777654
No 110
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.92 E-value=7.2e-22 Score=196.13 Aligned_cols=334 Identities=16% Similarity=0.118 Sum_probs=216.2
Q ss_pred hcCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCc
Q 013217 20 FKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sG 95 (447)
.+.++|..+++.. ++.+.+++...+.+. ...|+. ......+++...+++.+.+|. ++++ +.+++|
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~----i~~~~g 99 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDG-KTKYTP------AAGIPELREAIAAKLKRDNGLDYDPSQ----VIVTTG 99 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCC------CCChHHHHHHHHHHHHHHhCCCCCHHH----EEEeCC
Confidence 4557777666643 588888887776542 122332 222345655555566665554 4443 334666
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~kli 173 (447)
+ +|+..++.+++++||+|++.+|.|+++.. .+...|. +++.++.++ +++.+|++++++++++ ++++|
T Consensus 100 ~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v 168 (393)
T PRK05764 100 AKQALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGG--VPVFVPTGEENGFKLTVEQLEAAITP-KTKAL 168 (393)
T ss_pred cHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCC--EEEEEecCcccCCcCCHHHHHHhhCc-cceEE
Confidence 5 89999999999999999999988776431 2234454 555555653 3467999999999876 88999
Q ss_pred EEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC-------CcccEEEeCCCccc--CCCCC
Q 013217 174 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KYCDVVTTTTHKSL--RGPRG 239 (447)
Q Consensus 174 i~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~-------~~~Di~~~s~~K~l--~Gp~g 239 (447)
+++.++||+ .. ++++|.++|+++|+++++|+++. .+...+....++ ...++++.|++|++ +|.|.
T Consensus 169 ~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 247 (393)
T PRK05764 169 ILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRL 247 (393)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCcccee
Confidence 888788775 33 47899999999999999999863 333322110111 12568899999986 56677
Q ss_pred ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeC
Q 013217 240 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 318 (447)
Q Consensus 240 G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 318 (447)
|+++.++ ++.+.+......... +++.....+...++.. .....++..+++.++++.+.+.|++. |+.+..+
T Consensus 248 G~i~~~~------~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 319 (393)
T PRK05764 248 GYAAGPK------ELIKAMSKLQSHSTS-NPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP 319 (393)
T ss_pred EEEecCH------HHHHHHHHHHhhccc-CCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 9999877 677766554322222 2233332333334432 12334566777788888899999886 8876543
Q ss_pred CCCCeeEEecCCCCC----CCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 319 GSDNHLVLVDLRPMG----IDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 319 ~~~~~~~~v~~~~~~----~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
..++++|+++.... .+..++.+. ++++||.+..+ ..... .+++|+++. ++ ++++++.++.|.+
T Consensus 320 -~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g----~~f~~-~~~vRis~~--~~----~~~~~~~i~~l~~ 387 (393)
T PRK05764 320 -EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPG----IAFGA-PGYVRLSYA--TS----LEDLEEGLERIER 387 (393)
T ss_pred -CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccc----cccCC-CCEEEEEec--CC----HHHHHHHHHHHHH
Confidence 34566777775421 123566655 46789998543 22111 468999864 23 8999999999988
Q ss_pred HHH
Q 013217 394 GVE 396 (447)
Q Consensus 394 ~l~ 396 (447)
+++
T Consensus 388 ~~~ 390 (393)
T PRK05764 388 FLE 390 (393)
T ss_pred HHH
Confidence 775
No 111
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.92 E-value=5.7e-22 Score=202.85 Aligned_cols=340 Identities=15% Similarity=0.091 Sum_probs=208.5
Q ss_pred hcCeeEecCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHc--CCCCCccceeeec
Q 013217 20 FKSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQP 92 (447)
Q Consensus 20 ~~~i~l~~~~n-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~--g~~~~~~~~~v~~ 92 (447)
+..|+|..++. .+|+.+.+++...+.. ..+|+.. .....+.+.+.+++.+.. +++++ +|.+
T Consensus 146 ~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~~------~G~~~lReaia~~~~~~~~~~~~~~----~I~i 213 (517)
T PRK13355 146 THILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSDS------KGLFSARKAIMQYAQLKGLPNVDVD----DIYT 213 (517)
T ss_pred CCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCC------cChHHHHHHHHHHHHhcCCCCCChh----HEEE
Confidence 35678876443 2488899988776543 2244433 222344433334444433 34554 4556
Q ss_pred CCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCC
Q 013217 93 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRP 170 (447)
Q Consensus 93 ~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~ 170 (447)
++|+ +++..++.++++|||+|++++|.|..+.. .+...|. +++.++++++ ++.+|++++++++++ ++
T Consensus 214 t~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~ 282 (517)
T PRK13355 214 GNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA--------CVNLAGG--TAVHYRCDEQSEWYPDIDDIRSKITS-RT 282 (517)
T ss_pred eCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH--------HHHHCCC--EEEEeecCcccCCCCCHHHHHHhcCc-Cc
Confidence 8887 88888999999999999999998765431 2344554 5556666643 578999999999877 89
Q ss_pred cEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC-C-ccc---EEEeCCCccc--CCCC
Q 013217 171 KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCD---VVTTTTHKSL--RGPR 238 (447)
Q Consensus 171 klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~-~-~~D---i~~~s~~K~l--~Gp~ 238 (447)
|+|+++.|+||+ ..+ +++|.++|++||+++|+|+++ ..+.+.+....++ . ..+ +++.|++|++ +|+|
T Consensus 283 k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y-~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~R 361 (517)
T PRK13355 283 KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIY-DRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYR 361 (517)
T ss_pred eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhh-hhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccc
Confidence 999998888886 555 788999999999999999995 4544433211111 1 112 3458999984 7999
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH---HHHHHHHHHHHHHHHHHC-CcE
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY---QNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~---~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
.||++.+.......++.+.+....... .+ ++.....+...++... ..+.++ ..++.++++.+.+.|.+. |++
T Consensus 362 iG~~i~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~q~a~~~aL~~~--~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 437 (517)
T PRK13355 362 IGWMILSGNKRIAKDYIEGLNMLANMR-LC-SNVPAQSIVQTALGGH--QSVKDYLVPGGRVYEQRELVYNALNAIPGIS 437 (517)
T ss_pred eEEEEeeCchhhHHHHHHHHHHHhcCc-CC-cChHHHHHHHHHhcCC--ccHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 999986521100002333333221111 12 2333333333444321 112222 234566678888888875 877
Q ss_pred eeeCCCCCeeEEecCCCCC---C-CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 315 LVSGGSDNHLVLVDLRPMG---I-DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~~~---~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
+..+ ..++++|+++.... . +.+.+.+.|.++||.+..+...+ ...++++|+++. .. ++++++.++.
T Consensus 438 ~~~p-~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~---~~~~~~~Ris~~--~~----~~~l~~a~~r 507 (517)
T PRK13355 438 AVKP-KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFN---WDKPDHFRVVYL--PR----LEDLEDAMDR 507 (517)
T ss_pred cCCC-CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhC---CCCcCEEEEEeC--CC----HHHHHHHHHH
Confidence 6553 45666776764321 1 23456678889999995432221 113568999973 33 7888888888
Q ss_pred HHHHHHH
Q 013217 391 IHEGVEI 397 (447)
Q Consensus 391 i~~~l~~ 397 (447)
|.+.+..
T Consensus 508 l~~~~~~ 514 (517)
T PRK13355 508 LADFFSY 514 (517)
T ss_pred HHHHHHH
Confidence 8777653
No 112
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=7.2e-22 Score=195.41 Aligned_cols=336 Identities=13% Similarity=0.097 Sum_probs=215.9
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sG 95 (447)
.+.+.|-.+.+. .++.+.+++.+.+.+.+ .+|+.. +....+++...+++.+.+|. +++ .+|..++|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~~------~g~~~lr~~ia~~l~~~~g~~~~~~---~~I~~t~G 97 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTHN------AGLLELRKAACNFVKDKYDLHYSPE---SEIIVTIG 97 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC------CCCHHHHHHHHHHHHHHhCCCCCCC---CcEEEeCC
Confidence 456788766552 35788888888776432 233321 22345665555666655565 343 03445777
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 174 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii 174 (447)
+ +|+..++.+++++||+|++++|.|.++.. .+...|. +++.++.+.+++.+|.+++++.+.+ ++++|+
T Consensus 98 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~ 166 (387)
T PRK07683 98 ASEAIDIAFRTILEPGTEVILPAPIYPGYEP--------IIRLCGA--KPVFIDTRSTGFRLTAEALENAITE-KTRCVV 166 (387)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCccchHH--------HHHHcCC--EEEEeecCcccCCCCHHHHHHhcCc-CceEEE
Confidence 5 89999999999999999999987765421 2234454 5666667655677899999998876 899999
Q ss_pred EcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC------cccEEEeCCCccc--CCCCCce
Q 013217 175 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL--RGPRGGM 241 (447)
Q Consensus 175 ~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~------~~Di~~~s~~K~l--~Gp~gG~ 241 (447)
++.++||+ .. ++++|.++|+++|+++++|+++. .+...+.. .++. .-.+++.|++|.+ +|.|.||
T Consensus 167 i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~-~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~ 244 (387)
T PRK07683 167 LPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPH-TSIAHFPEMREKTIVINGLSKSHSMTGWRIGF 244 (387)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCc-CChhhccCCcCCeEEEeeccccccCccceeEE
Confidence 88888886 33 47889999999999999999964 33322211 1111 2348889999987 5778899
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
++.++ ++.+++..... ....+++.....++...+..- ....+...+++.++++.+.+.|.+.|+.+..+ ..
T Consensus 245 i~~~~------~l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~ 315 (387)
T PRK07683 245 LFAPS------YLAKHILKVHQ-YNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP-TG 315 (387)
T ss_pred EEcCH------HHHHHHHHHHH-hccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-Ce
Confidence 99987 66666654321 111122222222222233321 12345566777888889999998888765543 34
Q ss_pred CeeEEecCCCCCCCHHHHH-HHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+++.|+.+...+.+..++. ..|+++||.+..+... .+...+++||++.. + ++++++..+.|.+.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f---~~~~~~~~Ri~~~~--~----~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 316 AFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAF---SEYGEGYVRLSYAY--S----IETLKEGLDRLEAFLQ 382 (387)
T ss_pred eEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhh---CCCCCCeEEEEecC--C----HHHHHHHHHHHHHHHH
Confidence 5566766654345555555 4578899999654221 12235689998752 3 7788888888877664
No 113
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=198.70 Aligned_cols=321 Identities=18% Similarity=0.145 Sum_probs=217.3
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
.+.+.|..++|+ +|+.+++++.+.+...-..+|+.. + ..++ ++.+++++|.+.++ +|.+++|+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~---~~~l----r~~ia~~~~~~~~~---~I~~t~G~~ 91 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP----R---AAAL----KAALRAAMGVPAGA---DVLLGNGSD 91 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC----C---HHHH----HHHHHHHhCcCCCC---cEEEcCCHH
Confidence 356788888884 588999999877643212244431 1 1234 35677888876431 45568998
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.++++|||+|++.+|.|.++.. .+...|. ++++++++ +++.+|++++++.+...++++|+++
T Consensus 92 ~~i~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 92 ELIQLLALACAKPGATVLAPEPGFVMYRM--------SAKLAGL--EFVGVPLT-ADFTLDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCHHHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCCEEEEc
Confidence 78888888889999999999987765421 2334554 56666676 4578999999999876589999999
Q ss_pred CCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCcc-cCCCCCceEEeecCCcch
Q 013217 177 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKS-LRGPRGGMIFFKKDPVLG 251 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~-l~Gp~gG~i~~~~~~~~~ 251 (447)
.++||+ ..+.+++.++++..+.++++|+++. .+......+ .+. ...+++.|++|+ ++|.|.|+++.++
T Consensus 161 ~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~----- 233 (356)
T PRK04870 161 YPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP----- 233 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH-----
Confidence 888886 7788888888887789999999863 332211111 111 124788999993 3678889999887
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCeeEEecCC
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~ 330 (447)
++.+.+.....+. +.+.....+...+++.. ..+++..+++.++++.+.+.|.+. |+.+.. ..+.++|+.+.
T Consensus 234 -~~i~~~~~~~~~~---~~~~~~q~~a~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~ 305 (356)
T PRK04870 234 -AWIAELDKVRPPY---NVNVLTQATALFALEHV--DVLDAQAAQLRAERTRLAAALAALPGVTVFP--SAANFILVRVP 305 (356)
T ss_pred -HHHHHHHHccCCC---cCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeEEEEECC
Confidence 6777776544322 12222222223333321 235667788888999999999885 776543 33556777764
Q ss_pred CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 331 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 331 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+..++.+.|.++||.+..+...+ +..++++|+++. + .++++++.++|+++
T Consensus 306 ----~~~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRis~~---~----~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ----DAAAVFDGLKTRGVLVKNLSGMH---PLLANCLRVTVG---T----PEENAQFLAALKAA 355 (356)
T ss_pred ----CHHHHHHHHHHCCEEEEECCCCC---CCCCCeEEEeCC---C----HHHHHHHHHHHHHh
Confidence 45778889999999997542211 123468999965 3 78999999999765
No 114
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=3.7e-22 Score=199.47 Aligned_cols=343 Identities=14% Similarity=0.068 Sum_probs=214.8
Q ss_pred cCeeEecCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeec
Q 013217 21 KSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQP 92 (447)
Q Consensus 21 ~~i~l~~~~n------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~ 92 (447)
..|+|--++. .+++.+.+++...+......+|+.. ....++.+.+.+++.+.+|. +++ +|..
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~~~~~~~~----~v~i 122 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTC------VGLLPARRAIAEYLSRDLPYELSTD----DIYL 122 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCC------ccCHHHHHHHHHHHhhccCCCCChh----hEEE
Confidence 5677765544 2468899998887765322244432 12334554444555554444 343 3445
Q ss_pred CCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCC
Q 013217 93 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRP 170 (447)
Q Consensus 93 ~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~ 170 (447)
|+|+ +|+..++.++++|||+|++++|.|+.+.. .....|. +++.+++.+ +++.+|++++++++++ ++
T Consensus 123 t~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~ 191 (430)
T PLN00145 123 TAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA--------RAVFSGL--EVRHFDLLPERGWEVDLEGVEALADE-NT 191 (430)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEeeCCcccCCcCCHHHHHHHhCc-Cc
Confidence 7776 89999999999999999999988765421 2234454 444444433 4578999999998877 88
Q ss_pred cEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---Cc--ccEEEeCCCcc--cCCCC
Q 013217 171 KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKS--LRGPR 238 (447)
Q Consensus 171 klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~~--~Di~~~s~~K~--l~Gp~ 238 (447)
+++++++|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+....++ +. .-+++.|++|. ++|+|
T Consensus 192 ~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~R 270 (430)
T PLN00145 192 VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVY-DHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWR 270 (430)
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccc-hhhccCCCCccchhhhcccCcEEEEeccccccCCCCee
Confidence 999988888886 555 678888999999999999995 4554433211121 11 23778999998 47889
Q ss_pred CceEEeecCCcch--hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEe
Q 013217 239 GGMIFFKKDPVLG--VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKL 315 (447)
Q Consensus 239 gG~i~~~~~~~~~--~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~ 315 (447)
.||++...+.... .++.+.+.... .....++....+++..+++.-....+++..+++.++++.+.+.|++ .|+.+
T Consensus 271 lG~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~ 348 (430)
T PLN00145 271 LGWIATCDPNGILKETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITC 348 (430)
T ss_pred EEEEEEecchhhhhhhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999985321000 01122233222 1222233333344444554312233577788888999999999987 47764
Q ss_pred eeCCCCCeeEEecCCCC---CC-CHH-HHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 316 VSGGSDNHLVLVDLRPM---GI-DGA-RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 316 ~~~~~~~~~~~v~~~~~---~~-~~~-~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
...++...++|+.+... +. +.. .+.+++++.||.+.. +.... .++++||++.. . +++++...+.
T Consensus 349 ~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~p----G~~fg-~~~~lRis~~~--~----~~~l~~al~r 417 (430)
T PLN00145 349 PHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLP----GSALG-MKNWLRITFAI--D----PPSLEDGLER 417 (430)
T ss_pred CcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeC----ccccC-CCCeEEEEeCC--C----HHHHHHHHHH
Confidence 43234567778876421 22 344 445677889999954 43211 14689999752 3 6778887777
Q ss_pred HHHHHHHH
Q 013217 391 IHEGVEIT 398 (447)
Q Consensus 391 i~~~l~~~ 398 (447)
|.+.+...
T Consensus 418 l~~~~~~~ 425 (430)
T PLN00145 418 LKSFCLRH 425 (430)
T ss_pred HHHHHHHh
Confidence 77777644
No 115
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.92 E-value=9.8e-23 Score=197.47 Aligned_cols=325 Identities=14% Similarity=0.110 Sum_probs=216.3
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCC-CcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCC
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 109 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~-~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~p 109 (447)
..|.+|++++.+++.+....|... ...+...++.+.++ .+++.++++|+++.++. +.+...|||.|+.+++.+++++
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~-~~~~~l~~l~~~~~~~~-v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVAN-EAESDLRELLNIPDNYE-VLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCchHHHHHHHHhcCCC
Confidence 368899999999887522111110 01123455555555 67889999999853322 3455567889999999999999
Q ss_pred CCEEEEecCCCCcccCCCccccccccccccceeEEEecccC-CCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCCh
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY 186 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~ 186 (447)
||++++..... +++.+. ..++..|. +..+..+-. +....+|+++++ +++ ++++|.+++..+++ ..+
T Consensus 80 ~~~~l~i~~G~---fg~r~~---~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~- 148 (349)
T TIGR01364 80 GKVADYIVTGA---WSKKAA---KEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR- 148 (349)
T ss_pred CCeEEEEECCH---HHHHHH---HHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-
Confidence 99999876433 333321 12334454 343332211 123357777666 334 78999887544443 334
Q ss_pred HHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhc----
Q 013217 187 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA---- 261 (447)
Q Consensus 187 ~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~---- 261 (447)
++++.+++++++|+++++|..+.++. ..|++++|.||+| ||.| |++++++ +..+++...
T Consensus 149 ----~l~~~~~~l~iVDavss~g~~~id~~-----~~d~~~~ssqK~l-gP~Glg~l~~s~------~~~~~~~~~~~~~ 212 (349)
T TIGR01364 149 ----ELPDVKNAPLVADMSSNILSRPIDVS-----KFGLIYAGAQKNI-GPAGLTVVIVRK------DLLGRASRITPSM 212 (349)
T ss_pred ----eecccCCCeEEEEccccccCccCCHH-----HccEEEEeccccc-CCCceEEEEECH------HHHhhcccCCCCc
Confidence 67777899999999999887655432 3579999999987 6999 9999998 444433221
Q ss_pred -------cCCCCCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC--CCC-eeEEecC
Q 013217 262 -------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLVSGG--SDN-HLVLVDL 329 (447)
Q Consensus 262 -------~~~~~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~~-~~~~v~~ 329 (447)
......|||+.+.+.++..|++++..+ +++++.++..+.++++.+.|++. |+...... ..+ ..+.+.+
T Consensus 213 ~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~ 292 (349)
T TIGR01364 213 LNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTL 292 (349)
T ss_pred chHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEec
Confidence 001224799999999999999999888 69999999999999999999997 56444211 112 1222333
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
....+ ..++.+.+.+.||.+. ++.. ..+.+|+|+..+++ ++|++++.++|+++++
T Consensus 293 ~~~~~-~~~~~~~~~~~Gi~~~----~~~~---~~g~vRvS~~~~nt----~edid~l~~al~~~~~ 347 (349)
T TIGR01364 293 GNEEL-EKRFLKEAEERGLVSL----KGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFQK 347 (349)
T ss_pred CChhH-hHHHHHHHHHCCCccc----CCcc---ccCeeEEECcCCCC----HHHHHHHHHHHHHHHH
Confidence 32222 2456567788999442 2221 13589999999998 9999999999998665
No 116
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.92 E-value=1.4e-22 Score=196.24 Aligned_cols=302 Identities=15% Similarity=0.095 Sum_probs=190.2
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCE
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDR 112 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~ 112 (447)
.|.+.++....+. +|. |..+...++| +.+++++|.+++.+ +..++|++||..++.++++|||+
T Consensus 35 ~~~~~~~~~~~~~-~~~---------g~~~~~~~Le----~~lA~~~g~~~e~i---lv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 35 GFKIDEEDLELLE-TYV---------GPAIFEEKVQ----ELGREHLGGPEEKI---LVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ChhHHHHHHHHHH-Hhc---------CCHHHHHHHH----HHHHHHcCCCcceE---EEECCHHHHHHHHHHHhCCCCCE
Confidence 5777777665543 331 1223344555 68999999976532 23355569999999999999999
Q ss_pred EEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-C---CChHH
Q 013217 113 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-D---FDYPR 188 (447)
Q Consensus 113 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~---~~~~~ 188 (447)
|+++.++.+.|.+.. ..+...|. +++. . .|+++++. .+ ++++|+++.++..+ . .++++
T Consensus 98 Vli~~~d~p~~~s~~-----~~~~l~ga--~~~~--~------~~l~~l~~--~~-~~~lIiitg~s~~G~v~~~~~L~~ 159 (346)
T TIGR03576 98 VVHYLPEKPAHPSIP-----RSCKLAGA--EYFE--S------DELSELKK--ID-GTSLVVITGSTMDLKVVSEEDLKR 159 (346)
T ss_pred EEECCCCCCCchhHH-----HHHHHcCC--EEec--c------CCHHHHhh--Cc-CceEEEEECCCCCCcccCHHHHHH
Confidence 998655444432211 12344554 2222 1 24555432 23 68888887554444 3 47899
Q ss_pred HHHHHHHhCCEEEEehhhhcccccc-ccCCCCCC-cccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhccCCCC
Q 013217 189 MRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL 266 (447)
Q Consensus 189 i~~ia~~~g~~livD~a~~~g~~~~-~~~~~~~~-~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~ 266 (447)
|.++|+++|+++++|+||..|.... +. ..... +.|++++|+||+++|+|+|++++++ ++.+.+.....+..
T Consensus 160 i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~~~~~divv~s~SKalaG~r~G~v~~~~------~li~~l~~~~~~~~ 232 (346)
T TIGR03576 160 VIKQAKSKEAIVLVDDASGARVRRLYGQ-PPALDLGADLVVTSTDKLMDGPRGGLLAGRK------ELVDKIKSVGEQFG 232 (346)
T ss_pred HHHHHHHcCCEEEEECCccccccccCCC-CCHHHcCCcEEEeccchhccccceEEEEeCH------HHHHHHHHhhcCcc
Confidence 9999999999999999998765321 11 11011 3689999999999999999999998 78787776555544
Q ss_pred CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhc
Q 013217 267 QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMA 346 (447)
Q Consensus 267 ~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~ 346 (447)
.+ .+....++...+|+... .+...+.+.++++.+.+.+.+ +.+... ...++++++...+ +.+.+.+.|+++
T Consensus 233 ~s-~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~--~~~f~~~~~~~~~-~~~~~~~ll~~~ 303 (346)
T TIGR03576 233 LE-AQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERT--PTGFVIKGVEEEK-LIEIGLDLLRNY 303 (346)
T ss_pred cC-ccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC--CCeEEEEeCCCCC-HHHHHHHHHHhC
Confidence 33 33344455555776432 234455666666666666653 444432 2336777875321 235677888999
Q ss_pred CeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHH---HHHHHHHHHHHHH
Q 013217 347 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK---EFVAIADFIHEGV 395 (447)
Q Consensus 347 gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~---di~~l~~~i~~~l 395 (447)
||.+..+ ...+..++++||+... . ++ +++++.++|++.+
T Consensus 304 gV~v~~~----~~f~~~~~~vRis~~~--~----~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 304 GIITITA----VGMPGASKTLRFDLAA--K----DAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CEEEeCC----cccCCCCCeEEEEEec--C----hHHhcCHHHHHHHHHhcc
Confidence 9999653 2111124689998542 1 33 7999999887654
No 117
>PRK08363 alanine aminotransferase; Validated
Probab=99.92 E-value=7.8e-22 Score=196.04 Aligned_cols=336 Identities=16% Similarity=0.094 Sum_probs=210.5
Q ss_pred cCeeEecCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecC
Q 013217 21 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPL 93 (447)
Q Consensus 21 ~~i~l~~~~n-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~ 93 (447)
..++|..++. ..++.+.+++.+.+.+. ...|+ .......+++...+++.+.+|. +++ +|.++
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~it 99 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-HNYYG------PSEGLPELREAIVKREKRKNGVDITPD----DVRVT 99 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-CCCCC------CCCCcHHHHHHHHHHHHHhcCCCCChh----hEEEe
Confidence 4588876665 36788899988766532 11222 1222345655555566655564 454 34457
Q ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEec-ccCCCCCCCCHHHHHHHhhhhCCc
Q 013217 94 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPK 171 (447)
Q Consensus 94 sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~id~~~l~~~~~~~~~k 171 (447)
+|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +.+.+ +.+++++.+|++++++.+.+ +++
T Consensus 100 ~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~ 168 (398)
T PRK08363 100 AAVTEALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKITE-KTK 168 (398)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCCc-ceE
Confidence 776 89999999999999999999998876532 2233443 44444 34445567999999998876 889
Q ss_pred EEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC--CCc--ccEEEeCCCccc--CCCCCc
Q 013217 172 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKY--CDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 172 lii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~--~~~--~Di~~~s~~K~l--~Gp~gG 240 (447)
+|+++.++||+ ..+ +++|.++|+++|+++++|+++. .+.+.+..... +.. --+++.|++|++ +|.|.|
T Consensus 169 ~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 247 (398)
T PRK08363 169 AIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLG 247 (398)
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceEE
Confidence 99998888876 455 7899999999999999999964 33332211110 111 136679999985 577889
Q ss_pred eEEe--ecCCcchhhHHHHhhhccC---CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcE
Q 013217 241 MIFF--KKDPVLGVELESAINNAVF---PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 241 ~i~~--~~~~~~~~~~~~~i~~~~~---~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
++++ ++ ++.+.+..... ....+ ++.....+...++... ....++..+++.++++.+.+.|.+. |+.
T Consensus 248 ~~~~~~~~------~~~~~l~~~~~~~~~~~~~-~s~~~q~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 248 YIYFVDPE------GKLAEVREAIDKLARIRLC-PNTPAQFAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEIPGIS 319 (398)
T ss_pred EEEEeCcH------HHHHHHHHHHHHHhccccc-CChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 9998 43 34333322110 00111 2222222333344321 2334667788888889999999875 776
Q ss_pred eeeCCCCCeeEEecCCCC-CCCH-HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 315 LVSGGSDNHLVLVDLRPM-GIDG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~~-~~~~-~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
+..+ ..+++.|+.+... ..+. +.+.+.|.++||.+..+... +....+++|+++. .+ ++++++..+.|.
T Consensus 320 ~~~p-~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f---~~~~~~~iRis~~--~~----~~~l~~~l~~l~ 389 (398)
T PRK08363 320 TTKP-QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGF---GEYGAGHFRLVFL--PP----VEILEEAMDRFE 389 (398)
T ss_pred ecCC-CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhh---CCCCCCeEEEEec--CC----HHHHHHHHHHHH
Confidence 5433 3456666666531 1133 34567778999999654221 1122458999974 33 788888888887
Q ss_pred HHHHH
Q 013217 393 EGVEI 397 (447)
Q Consensus 393 ~~l~~ 397 (447)
+++..
T Consensus 390 ~~~~~ 394 (398)
T PRK08363 390 EFMRE 394 (398)
T ss_pred HHHHH
Confidence 77653
No 118
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1.1e-22 Score=199.23 Aligned_cols=311 Identities=16% Similarity=0.167 Sum_probs=212.9
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
+..|.|..++|+ +|+.+++++.+.+... ..||.. | ...+ ++.+++++|++++ +|.+++|+
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~--~~Yp~~----g---~~~L----r~aia~~~~~~~~----~I~vt~Gs~ 91 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDH--ALYPDG----G---ATTL----RQTIANKLHVKME----QVLCGSGLD 91 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhc--CcCCCC----C---HHHH----HHHHHHHhCCCcc----eEEECCCHH
Confidence 356899999996 4788999987765432 123321 1 1233 3567778899876 45568887
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.++++|||+|++.+|.|.++.. .+...|. +++.++++ ++.+|++++++++++ ++++|+++
T Consensus 92 e~i~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (366)
T PRK01533 92 EVIQIISRAVLKAGDNIVTAGATFPQYRH--------HAIIEGC--EVKEVALN--NGVYDLDEISSVVDN-DTKIVWIC 158 (366)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCC--EEEEeecC--CCCcCHHHHHHHhCc-CCcEEEEe
Confidence 88899999999999999999988766532 2334554 45555554 356999999998876 89999998
Q ss_pred CCCCCC--CCChHHHHHHHH---HhCCEEEEehhhhccccccccCCCCCC-----cccEEEeCCCccc--CCCCCceEEe
Q 013217 177 ASAYPR--DFDYPRMRQIAD---AVGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFF 244 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~---~~g~~livD~a~~~g~~~~~~~~~~~~-----~~Di~~~s~~K~l--~Gp~gG~i~~ 244 (447)
.|+||+ ..+.+++.++++ +++ ++++|++++ .+...+..+..+. ..-+++.|++|++ +|.|.||+++
T Consensus 159 ~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 159 NPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 888886 667666655554 444 678899964 4443221111111 1348889999986 6888899998
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCe
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 323 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 323 (447)
++ ++.+.+.....+ .+.+.....+...+++ ...+ ++..+...++++.+.+.+...|+++..+ +..
T Consensus 237 ~~------~~~~~l~~~~~~---~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~--~~n 302 (366)
T PRK01533 237 HE------ELIEKLNVVRLP---FNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPFYQS--QTN 302 (366)
T ss_pred CH------HHHHHHHHhcCC---CCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC--cCc
Confidence 87 787777665432 2234433334444443 2333 5556677777888888888888876553 355
Q ss_pred eEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 324 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
++|+.+. +..++.+.|.++||.|+. . ++++||++. + .+|++++.++|++++..
T Consensus 303 f~~~~~~----~~~~~~~~l~~~GI~Vr~----~------~~~iRis~~---~----~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 303 FIFLPVE----NGGEIYEACAHAGFIIRP----F------PNGVRITVG---T----REQNEGVISVLQQHFEN 355 (366)
T ss_pred EEEEeCC----CHHHHHHHHHHCCcEEcc----C------CCceEEeCC---C----HHHHHHHHHHHHHHHHh
Confidence 6788763 356788999999999974 1 347999854 3 89999999999988764
No 119
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.92 E-value=2.3e-22 Score=213.28 Aligned_cols=299 Identities=20% Similarity=0.187 Sum_probs=207.7
Q ss_pred HHHHHHHHHHcCCCCCccceeeecCCcH---HHHHHHHHHhcCC-CC----EEEEecCCCCcccCCCccccccccccccc
Q 013217 69 TLCQKRALAAFNLDENKWGVNVQPLSGS---PANFEVYTAILKP-HD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSI 140 (447)
Q Consensus 69 ~~~~~~~~~~~g~~~~~~~~~v~~~sGs---~a~~~~~~al~~p-gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (447)
..+++++++++|++. +.+++.+|+ .++..++.++.++ || +|+++..+|+++..++ ...|
T Consensus 571 ~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a--------~~~G- 637 (993)
T PLN02414 571 EDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASA--------AMCG- 637 (993)
T ss_pred HHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHH--------HHCC-
Confidence 467899999999954 567777775 4777788888866 88 8999999998875432 2334
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhh--hCCcEEEEcCCCCC-C-CCChHHHHHHHHHhCCEEEEehhhhccccccccC
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 216 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~--~~~klii~~~~~~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~ 216 (447)
++++.++++ ++|.+|+++|++++++ .++++|+++.+++- + ..|+++|+++||++|+++++|++|..++...
T Consensus 638 -~~vv~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l--- 712 (993)
T PLN02414 638 -MKIVVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL--- 712 (993)
T ss_pred -CEEEEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc---
Confidence 456666666 5689999999999985 25788888855544 4 5679999999999999999999998776422
Q ss_pred CCCCC-cccEEEeCCCcccCCCC-----C-ceEEeecCCcchhhHHHHhhhcc-----------CCCCCCCCc----HHH
Q 013217 217 ADPFK-YCDVVTTTTHKSLRGPR-----G-GMIFFKKDPVLGVELESAINNAV-----------FPGLQGGPH----NHT 274 (447)
Q Consensus 217 ~~~~~-~~Di~~~s~~K~l~Gp~-----g-G~i~~~~~~~~~~~~~~~i~~~~-----------~~~~~g~p~----~~~ 274 (447)
..|.. ++|++++|.||||++|. | |++++++. +...+-... .+...|+.+ .+.
T Consensus 713 ~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~a 786 (993)
T PLN02414 713 TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSA 786 (993)
T ss_pred CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh------hcccCCCCccccCCCcccccCCCCcCCccchhhhhH
Confidence 22322 69999999999987554 4 88888873 332221100 011123321 111
Q ss_pred -HHHHHHH-HHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCC---CCCeeEEecCCC----CCCCHHHHHHHHhh
Q 013217 275 -IGGLAVC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG---SDNHLVLVDLRP----MGIDGARVEKILDM 345 (447)
Q Consensus 275 -~aal~~a-l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~v~~~~----~~~~~~~~~~~L~~ 345 (447)
++..+.+ ++.+..+++++..++...|+++++++|.+ ++.+...+ ..-|-++++++. .+++..++.+.|.+
T Consensus 787 l~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d 865 (993)
T PLN02414 787 LILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMD 865 (993)
T ss_pred HHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHH
Confidence 1111112 34444556777788999999999999987 55544422 223455667652 23566889999999
Q ss_pred cCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013217 346 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 402 (447)
Q Consensus 346 ~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~~~ 402 (447)
+||..-....| .++.+|++++.+++ ++|+|++++++..+.....+++
T Consensus 866 ~Gihapt~~~p------v~~~lmiepTE~~s----keelDrf~~al~~i~~e~~~~~ 912 (993)
T PLN02414 866 YGFHAPTMSWP------VPGTLMIEPTESES----KAELDRFCDALISIREEIADIE 912 (993)
T ss_pred cCcEEeeeccc------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHHh
Confidence 99986442222 25689999999988 9999999999988887776544
No 120
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.92 E-value=7.5e-23 Score=199.63 Aligned_cols=327 Identities=12% Similarity=0.031 Sum_probs=215.6
Q ss_pred eeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHH
Q 013217 23 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 102 (447)
Q Consensus 23 i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~ 102 (447)
..++|++..+++.|+++|.+... +..+ ..+.+.++.+.++ .+++.+++++|++.++- +.+...|||.++.++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~-----~~~~-~~hr~~~f~~~~~-~~r~~l~~l~~~~~~~~-v~f~~gs~T~a~~~~ 76 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAA-----SLFG-TSHRQAPVKNLVG-RVREGLAELFSLPDGYE-VILGNGGATAFWDAA 76 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCc-----cccc-cCcCChHHHHHHH-HHHHHHHHHhCCCCCce-EEEECCchhHHHHHH
Confidence 45789999999999999864210 1111 0123455666665 67899999999964321 223345678999999
Q ss_pred HHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCC-
Q 013217 103 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 181 (447)
Q Consensus 103 ~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~- 181 (447)
+.+++.+ +.+++..-+++..+.+.. +...+.+ .++.++ .+ ++..++.+ +.+ ++++|++++..+.
T Consensus 77 ~~~l~~~-~~l~i~~G~~~~~~~~~a----~~~~~~~-~~~~~~--~~-~~~~~~~~-----~~~-~~~lV~~~h~et~t 141 (361)
T TIGR01366 77 TFGLIEK-KSLHLSFGEFSSKFAKAV----KLAPWLG-EPIIVT--AD-PGSAPEPQ-----ADP-GVDVIAWAHNETST 141 (361)
T ss_pred HHhcccc-cccEEecCHHHHHHHHHH----HhhhccC-CceEEe--cC-CCCCCCCc-----cCC-CCCEEEEcccCCcc
Confidence 9998743 222232333332221110 0000112 223333 33 23334432 334 8999988843333
Q ss_pred C-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhh
Q 013217 182 R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 259 (447)
Q Consensus 182 ~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~ 259 (447)
+ ..|+++| ++++|+++++|++|++|....++. .+|++++|.||++++|.| ++++.++ +..+++.
T Consensus 142 G~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~-----~~D~~~~s~~K~lg~~~Gl~~~~~s~------~~~~~~~ 207 (361)
T TIGR01366 142 GVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA-----ETDVYYFAPQKNFASDGGLWLAIMSP------AALERIE 207 (361)
T ss_pred ceecccccc---cccCCCeEEEEcCccccCCCCCHH-----HCCEEEEEchhhcCCCCceEEEEECH------HHHhhhh
Confidence 3 7788887 588999999999999987755432 379999999999988877 5666676 3333332
Q ss_pred h--------------------ccCCCCCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHCC-cEeee
Q 013217 260 N--------------------AVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVS 317 (447)
Q Consensus 260 ~--------------------~~~~~~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 317 (447)
. ....+..++|+...+.++..+++.+... +++...++..+.++++.+.|.+.+ ++++.
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~ 287 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFV 287 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 1 1112346778888888999999998877 588888999999999999999976 45553
Q ss_pred CCC--CC-eeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 318 GGS--DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 318 ~~~--~~-~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
... .+ ....+.+ +.+++..++.+.|.++||.+.... .......+|+|++.++| ++|+++++++|+++
T Consensus 288 ~~~~~~s~~v~~v~~-~~g~~~~~v~~~L~~~gI~i~~~~-----~~l~~~~vRis~~~~~t----~~di~~l~~al~~~ 357 (361)
T TIGR01366 288 TDPGKRSQVVGTIDF-VDDIDAATVAKILRANGIVDTEPY-----RKLGRNQLRVAMFPAID----PDDVEALTECVDWV 357 (361)
T ss_pred CChhhcccceEEEEC-CCccCHHHHHHHHHHCCCeeccCc-----cccCCCcEEEEcCCCCC----HHHHHHHHHHHHHH
Confidence 211 11 2234566 367888999999999999985421 11234579999999998 99999999999997
Q ss_pred HH
Q 013217 395 VE 396 (447)
Q Consensus 395 l~ 396 (447)
++
T Consensus 358 ~~ 359 (361)
T TIGR01366 358 VE 359 (361)
T ss_pred Hh
Confidence 65
No 121
>PRK07324 transaminase; Validated
Probab=99.92 E-value=2.9e-22 Score=197.09 Aligned_cols=288 Identities=17% Similarity=0.157 Sum_probs=187.0
Q ss_pred HHHHHHcC-CCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccC
Q 013217 73 KRALAAFN-LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 150 (447)
Q Consensus 73 ~~~~~~~g-~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (447)
+.++++++ .+++ +|.+|+|+ +|+..++.++++|||+|++..|.|.++.. .+...|. +++.++++
T Consensus 69 ~~ia~~~~~~~~~----~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~ 134 (373)
T PRK07324 69 EAVASLYQNVKPE----NILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYD--------IPESLGA--EVDYWQLK 134 (373)
T ss_pred HHHHHHhcCCChh----hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecc
Confidence 45556553 5554 34457776 89999999999999999999887765421 2234454 55555565
Q ss_pred CC-CCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--c
Q 013217 151 ES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y 222 (447)
Q Consensus 151 ~~-~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~ 222 (447)
++ ++.+|++++++++.+ +||+|+++.++||+ ..+ +++|+++|+++|+++++|+++ .++...+..++... .
T Consensus 135 ~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y-~~l~~~~~~~s~~~~~~ 212 (373)
T PRK07324 135 EENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVY-RPLDEDGSTPSIADLYE 212 (373)
T ss_pred cccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCCChhhccC
Confidence 43 456899999998876 89999999888886 566 789999999999999999985 55554332222111 1
Q ss_pred ccEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 223 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 223 ~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
..+++.|++|++ +|+|.||+++++ ++.+.+.+.......+.+...+.++. .+++.. ....++..+.+.++
T Consensus 213 ~~I~~~s~SK~~~~~G~RiG~i~~~~------~li~~~~~~~~~~~~~~~~~~q~~a~-~~l~~~-~~~l~~~~~~~~~~ 284 (373)
T PRK07324 213 KGISTNSMSKTYSLPGIRVGWIAANE------EVIDILRKYRDYTMICAGVFDDMLAS-LALEHR-DAILERNRKIVRTN 284 (373)
T ss_pred CEEEEecchhhcCCccceeEEEecCH------HHHHHHHHHhCcEEecCChHHHHHHH-HHHcCH-HHHHHHHHHHHHHH
Confidence 247889999986 588889999976 77777766543322233333333332 234321 11234555666777
Q ss_pred HHHHHHHHHHC-CcEeeeCCCCCeeEEecCCCCCCCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCC
Q 013217 301 CRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 378 (447)
Q Consensus 301 ~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g 378 (447)
++.+.+.|.+. ++.+..+ ......|+.+.. +.+..++.+. |+++||.+.+ |.... .++++||++.. +
T Consensus 285 ~~~l~~~l~~~~~~~~~~p-~gg~~~~i~~~~-~~~~~~~~~~ll~~~gv~v~p----g~~F~-~~~~iRis~~~--~-- 353 (373)
T PRK07324 285 LAILDEWVAKEPRVSYVKP-KAVSTSFVKLDV-DMPSEDFCLKLLKETGVLLVP----GNRFD-LEGHVRIGYCC--D-- 353 (373)
T ss_pred HHHHHHHHhcCCCceEECC-CceEEEEEEeCC-CCCHHHHHHHHHHhcCEEEEC----ccccC-CCCeEEEEecC--C--
Confidence 88888888774 6665543 223344555532 3456666655 5789999954 33211 24689999642 2
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 013217 379 FSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 379 ~~~~di~~l~~~i~~~l~~ 397 (447)
++.+++..+.|.+++..
T Consensus 354 --~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 354 --TETLKKGLKKLSEFLRE 370 (373)
T ss_pred --HHHHHHHHHHHHHHHHh
Confidence 67777777777776653
No 122
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=5.6e-22 Score=195.02 Aligned_cols=321 Identities=18% Similarity=0.176 Sum_probs=217.0
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhcc--CCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCC
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLS 94 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~--~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~s 94 (447)
..+.|..++|+ +|+.+++++.+.+... ...+||.. | ...+.+.+.+++.+.+|. +++ +|.+|+
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~----g---~~~lr~aia~~~~~~~~~~~~~~----~I~it~ 95 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDR----D---AVALRADLAAYLTAQTGVGLTVE----NVWAAN 95 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCC----c---hHHHHHHHHHHhhhhccCCCChh----hEEECC
Confidence 34788888885 5788999988765421 11234321 1 234554555666666664 454 455699
Q ss_pred cH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 013217 95 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 95 Gs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~kli 173 (447)
|+ +++..++.++++|||.|++..|.|.++.. .+...| .++++++.+ +++.+|++++++++...++++|
T Consensus 96 G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g--~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i 164 (368)
T PRK03317 96 GSNEILQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTH--TEWVEGPRA-ADFTLDVDAAVAAIAEHRPDVV 164 (368)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcC--CeeEEcccC-CCCCCCHHHHHHHHhccCCCEE
Confidence 98 89999999999999999999998766531 122333 355565554 4578999999999876688999
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----c-ccEEEeCCCccc--CCCCCceEEe
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKSL--RGPRGGMIFF 244 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----~-~Di~~~s~~K~l--~Gp~gG~i~~ 244 (447)
+++.++||+ ..+.+++.++|+..++++|+|++|. ++...+. +.... . -.+++.|++|.+ +|.|.|++++
T Consensus 165 ~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~ 242 (368)
T PRK03317 165 FLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA 242 (368)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhC
Confidence 888888876 7899999999999999999999974 3332221 11111 1 236778999987 4778899999
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 324 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 324 (447)
++ ++.+.+.....+. + .+....++...+++.. ..+.+..+++.++++.+.+.|.+.|+.+..+ ..+++
T Consensus 243 ~~------~~~~~l~~~~~~~--~-~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~ 310 (368)
T PRK03317 243 AP------AVVDALRLVRLPY--H-LSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAPS-DANFV 310 (368)
T ss_pred CH------HHHHHHHhcCCCC--C-CCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCCC-CCcEE
Confidence 87 6777776543222 1 2333333334455432 2345556777888888899998888876543 23444
Q ss_pred EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 325 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.|.++. +..++.+.|.++||.+... . .++++|+++. + .++++++.+++.+++.
T Consensus 311 ~~~~~~----~~~~~~~~l~~~Gv~v~~~----~----~~~~iRi~~~---~----~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 311 LFGRFA----DRHAVWQGLLDRGVLIRDV----G----IPGWLRVTIG---T----PEENDAFLAALAEVLA 363 (368)
T ss_pred EEeccC----CHHHHHHHHHHCCEEEEeC----C----CCCeEEEecC---C----HHHHHHHHHHHHHHHH
Confidence 443442 4577888898999999642 1 1358999954 3 7899999999988765
No 123
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=5.6e-22 Score=194.86 Aligned_cols=320 Identities=17% Similarity=0.101 Sum_probs=215.3
Q ss_pred CeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HH
Q 013217 22 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 98 (447)
Q Consensus 22 ~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a 98 (447)
.++|..+++. .++.+.+++.+.+... .+|+.. . ...++ +.++++++++++ +|.+++|+ ++
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~------~-~~~Lr----~~ia~~~~~~~~----~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEI--WKYGDP------E-NHDLR----HALAAHHGVAPE----NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC------c-cHHHH----HHHHHHhCCCHH----HEEEcCCHHHH
Confidence 3688888885 4788999987655321 233322 1 23444 567778888875 45569998 77
Q ss_pred HHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 99 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 99 ~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
+..++.++++|||.|++.+|.|+++.. .+...|. +++.++++. ..+|++++++.+...++++|+++.|
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~~P 164 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNY--------HVAGFGG--RLVTVPYRD--DREDLDALLDAARRENAPLVYLANP 164 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHH--------HHHHcCC--eEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEeCC
Confidence 777888889999999999988766532 1223444 445555542 3589999988776558999999888
Q ss_pred CCCC--CCChHHHHHHHHHh--CCEEEEehhhhccccccccCCCCCC---cccEEEeCCCccc--CCCCCceEEeecCCc
Q 013217 179 AYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 249 (447)
Q Consensus 179 ~~~~--~~~~~~i~~ia~~~--g~~livD~a~~~g~~~~~~~~~~~~---~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~ 249 (447)
+||+ ..+.+++.++++.. |+++|+|+++. .+...+.. .++. ...+++.|++|++ +|.|.||+++++
T Consensus 165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~-~~~~~~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--- 239 (369)
T PRK08153 165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAYC-ETAPAGAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP--- 239 (369)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hhcCcccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCH---
Confidence 8876 67777777776654 89999999963 34332211 1111 1237889999987 588889999987
Q ss_pred chhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecC
Q 013217 250 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 329 (447)
Q Consensus 250 ~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~ 329 (447)
++.+.+.....+ . +.+....++...+++. ....++..+.+.++++.+.+.|++.|+.+.. ...+++++++
T Consensus 240 ---~~~~~l~~~~~~--~-~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p--~~~~f~~~~~ 309 (369)
T PRK08153 240 ---GTIKAFDKVRNH--F-GMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLP--SATNFVAIDC 309 (369)
T ss_pred ---HHHHHHHHhhcC--C-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CcCcEEEEEC
Confidence 677766654322 1 2344444444445531 1224566777788888888889888876543 3456677777
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
........++.+.|.++||.++. |+.. ...+++|+++. + ++|++++.++|++++..
T Consensus 310 ~~~~~~a~~l~~~l~~~Gi~v~~---p~~~--~~~~~iRis~~---~----~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 310 GRDGAFARAVLDGLIARDIFVRM---PGVA--PLDRCIRVSCG---P----DEELDLFAEALPEALEA 365 (369)
T ss_pred CCCcccHHHHHHHHHHCCeEEee---CCCC--CCCCeEEEecC---C----HHHHHHHHHHHHHHHHH
Confidence 53334567788888889999852 3321 12458999965 3 89999999999988764
No 124
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=4.3e-22 Score=195.94 Aligned_cols=319 Identities=19% Similarity=0.178 Sum_probs=215.3
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
+..++|..++|+ .++.+++++...+.. + ..|+.. . ...++ +.+++++|++++ +|.+++|+
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~-~~~lr----~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------S-GFELK----AALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------c-HHHHH----HHHHHHhCcCHH----HEEEcCCHH
Confidence 456888877775 478888888776543 1 234432 1 12343 567788898775 34558888
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.+++++||+|++.+|.|..+.. .....|. +++.++. +++.+|++++++.+++ +|++|+++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~--~~~~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYPI--------AAQAVGA--KPVEVPA--KDYGHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHHH--------HHHHcCC--eEEEecc--cCCCCCHHHHHHHhCC-CCcEEEEe
Confidence 67777788889999999999987754321 1223444 4555545 3578999999999976 89999998
Q ss_pred CCCCCC--CCChHHHHHHHHHh--CCEEEEehhhhccccccccCCCCCC-----cccEEEeCCCccc--CCCCCceEEee
Q 013217 177 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFK 245 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~~~--g~~livD~a~~~g~~~~~~~~~~~~-----~~Di~~~s~~K~l--~Gp~gG~i~~~ 245 (447)
.++||+ ..+.+++.++|+.+ |+++++|+++.. +...+....++. ...+++.|++|.+ +|.|.|+++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAE-YVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHH-hccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC
Confidence 888876 78999999999875 899999999643 332221111111 1247788999985 57788999998
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 324 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 324 (447)
+ ++.+.+.....+. +. +.....+...++ .... .++..+...++.+.+.+.|++.|+.+.. ....+
T Consensus 241 ~------~~~~~l~~~~~~~--~~-~~~~~~~a~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~g~~ 306 (367)
T PRK02731 241 P------EIIDALNRVRQPF--NV-NSLALAAAVAAL---DDDAFVEKSRALNAEGMAWLTEFLAELGLEYIP--SVGNF 306 (367)
T ss_pred H------HHHHHHHHccCCC--CC-CHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CCceE
Confidence 7 6777776543222 11 222222222233 2233 3566677778888889999888887653 23567
Q ss_pred EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 325 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+|+.+. ...+..++.+.|.++||.+..+..++ .+++||++++ + .+|++++.++|+++++
T Consensus 307 ~~i~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~-----~~~~iRis~~---~----~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 307 ILVDFD-DGKDAAEAYQALLKRGVIVRPVAGYG-----LPNALRITIG---T----EEENRRFLAALKEFLA 365 (367)
T ss_pred EEEECC-CCCCHHHHHHHHHHCCEEEEeCCCCC-----CCCeEEEecC---C----HHHHHHHHHHHHHHHh
Confidence 788873 34567888999989999996532111 2458999964 3 7899999999988764
No 125
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=4.1e-22 Score=195.90 Aligned_cols=320 Identities=17% Similarity=0.141 Sum_probs=204.3
Q ss_pred EecCCCCC----CHHHHHHHhhhhhccC-------CCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeec
Q 013217 25 LIASENFT----SRAVMEAVGSCLTNKY-------SEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQP 92 (447)
Q Consensus 25 l~~~~n~~----~~~v~~a~~~~~~~~~-------~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~ 92 (447)
..+|.+|+ +|.+.+++...+.. | ..|..|+|...| .+..+++ ++.+++++|++. + +..
T Consensus 8 ~~~s~~YL~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~gs~~~~g~~~~~~~~----e~~la~~~~~~~----~-l~~ 77 (370)
T PRK05937 8 DFVTNDFLGFSRSDTLVHEVEKRYRL-YCRQFPHAQLGYGGSRAILGPSSLLDDL----EHKIAHFHGAPE----A-FIV 77 (370)
T ss_pred EeECCCccCCCCCHHHHHHHHHHHHH-hccccCCCCCCCCCcCcccCChHHHHHH----HHHHHHHhCCCe----E-EEE
Confidence 34677876 56666666555443 3 234445554333 2334444 478999999975 2 446
Q ss_pred CCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh----
Q 013217 93 LSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---- 168 (447)
Q Consensus 93 ~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~---- 168 (447)
+||+.||..++..+.++||.|++...+|++.+... ..... ..+.+ ...|+++++++++..
T Consensus 78 ~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~--------~~~~~--~~~~~------~~~d~~~l~~~l~~~~~~~ 141 (370)
T PRK05937 78 PSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSL--------SVISG--WHQSF------RHNDLDHLESLLESCRQRS 141 (370)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH--------HHcCC--ceEEe------cCCCHHHHHHHHHhhhccC
Confidence 99999998777777788999998888887664321 11111 11222 246899999988742
Q ss_pred -CCcEEEEcCCCCC-C-CCChHHHHHHHHHhCCEEEEehhhhccccccccC----CCCCCcccEEEeCCCcccCCCCCce
Q 013217 169 -RPKLIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFKYCDVVTTTTHKSLRGPRGGM 241 (447)
Q Consensus 169 -~~klii~~~~~~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~----~~~~~~~Di~~~s~~K~l~Gp~gG~ 241 (447)
++.+|++++.+++ + ..|+++|.++|+++|+++++|++|+.|.+..+.. ...+...++++.|++|.+ ||.|+.
T Consensus 142 ~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~ 220 (370)
T PRK05937 142 FGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAA 220 (370)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceE
Confidence 2446666644433 3 8899999999999999999999999886654321 111222346678899976 677755
Q ss_pred EEeecCCcchhhHHHHhhhccCCC-CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~-~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
+++.+ +..+.+.....|. ..++.+...++++..+++.+...+ ....+++.++++++.+.|...+ .+
T Consensus 221 vl~~~------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-----~~- 287 (370)
T PRK05937 221 LLSSS------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA-----PG- 287 (370)
T ss_pred EEcCH------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-----CC-
Confidence 55555 4444333211222 233456666777878888775443 3455667777777776664321 11
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
....+.+. +.+...+.+.|.++||.++..+.| ..+.||++++.++| ++|++++++.|+++++..
T Consensus 288 --~~~~i~~~--~~~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t----~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 288 --CVQPIFLP--GISEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNT----EDEVDILVSVLATYLEKY 351 (370)
T ss_pred --CEEEEEeC--ChhHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHh
Confidence 11112222 234577888999999998753333 13479999999998 999999999999988754
No 126
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.2e-22 Score=197.29 Aligned_cols=314 Identities=18% Similarity=0.165 Sum_probs=211.9
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
..++|..++|. .++.+++++...+.. . ..||.. ...++ ++.++++++++++ +|.+++|+ +
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~~p~~-------g~~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-L-ALYPDG-------YAPEL----RTKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-h-hcCCCC-------cHHHH----HHHHHHHhCCCHH----HEEECCCHHH
Confidence 55788878775 478899988776543 1 112221 12334 3567778888765 34458887 7
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
++..++.+++++||+|++.+|.|+++.. .....|. +++.++++ ++.+|++++++.+++ ++++|+++.
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~--------~~~~~g~--~~~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYRH--------NAIIEGA--EVREVPLK--DGGHDLEAMLKAIDE-QTKIVWICN 159 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEEecC--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence 8888888999999999999988766421 1233454 44455554 467999999988876 899999888
Q ss_pred CCCCC--CCChHHHHHHHHH--hCCEEEEehhhhccccccccCCCCCC-----cccEEEeCCCccc--CCCCCceEEeec
Q 013217 178 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK 246 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~--~g~~livD~a~~~g~~~~~~~~~~~~-----~~Di~~~s~~K~l--~Gp~gG~i~~~~ 246 (447)
++||+ ..+.++|.++++. +|+++|+|+++.. +...+..+.++. ...+++.|++|++ +|.|.|++++++
T Consensus 160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYE-YVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHh-hcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 88886 7788999999887 5999999999643 332221111111 1358889999987 478889999987
Q ss_pred CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeE
Q 013217 247 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 325 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 325 (447)
++.+.+.....+ .+. +.....++..+++ ... .++..+...++++.+.+.|.+.|+.+..+ ...++
T Consensus 239 ------~~~~~~~~~~~~--~~~-~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~g~~i 304 (359)
T PRK03158 239 ------ELIEKLNIARPP--FNT-TRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS--QTNFI 304 (359)
T ss_pred ------HHHHHHHHhcCC--CCC-CHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC--cCcEE
Confidence 677777654332 222 3333333333443 223 35556666777888888888888876543 24567
Q ss_pred EecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 326 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
|+++. .+..++.+.|.++||.+..+...+ .++++||++. + .+|++++.++|+++
T Consensus 305 ~~~~~---~~~~~~~~~l~~~gv~v~~g~~f~-----~~~~iRi~~~---~----~~~~~~l~~al~~~ 358 (359)
T PRK03158 305 FVDTG---RDANELFEALLKKGYIVRSGAALG-----FPTGVRITIG---L----KEQNDKIIELLKEL 358 (359)
T ss_pred EEECC---CCHHHHHHHHHHCCeEEeeCCCCC-----CCCeEEEecC---C----HHHHHHHHHHHHHh
Confidence 77763 356788888888999996542221 2468999854 3 89999999999775
No 127
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=4.8e-22 Score=195.94 Aligned_cols=318 Identities=17% Similarity=0.140 Sum_probs=213.5
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
...|+|..++|+ +||.+++++..... ...||.. . ...+ ++.+++++|++++ +|.+++|+
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~~~---~~~Yp~~------~-~~~l----r~~ia~~~~~~~~----~I~~t~Ga~ 113 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNMKF---PYVYPDP------E-SRRL----RAALAEDSGLESE----NILVGCGAD 113 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhhHh---hccCCCC------C-HHHH----HHHHHHHhCcChh----hEEEcCCHH
Confidence 356889899885 57888888754211 1122221 1 2234 4678888998875 45568887
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.++++|||+|++.+|.|+.+. ......|. +++.++.+ +++.+|++++++++...++++|+++
T Consensus 114 ~~i~~~~~~~~~~gd~Vlv~~P~y~~y~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l~ 182 (380)
T PLN03026 114 ELIDLLMRCVLDPGDKIIDCPPTFGMYV--------FDAAVNGA--EVIKVPRT-PDFSLDVPRIVEAVETHKPKLLFLT 182 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEeecC-CCCCcCHHHHHHHHhccCCcEEEEe
Confidence 7888888889999999999998875431 12234454 45555554 4578999999998844489999999
Q ss_pred CCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCccc--CCCCCceEEeecCCcc
Q 013217 177 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 250 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~ 250 (447)
.++||+ ..+.+++.++++.. +++++|+++ ..+...+.....+. ...+++.|++|.+ +|.|.|+++.++
T Consensus 183 ~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY-~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~---- 256 (380)
T PLN03026 183 SPNNPDGSIISDDDLLKILELP-ILVVLDEAY-IEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL---- 256 (380)
T ss_pred CCCCCCCCCCCHHHHHHHHhcC-CEEEEECcc-hhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH----
Confidence 888886 78999999999864 899999996 33332211000011 1348889999986 688889999987
Q ss_pred hhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC-cEeeeCCCCCeeEEecC
Q 013217 251 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVDL 329 (447)
Q Consensus 251 ~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~v~~ 329 (447)
++.+.+.....+.. .+.....+...+++. ...+++..+.+.++++.+.+.|++.+ +.+.. +.+.++|+.+
T Consensus 257 --~~i~~l~~~~~~~~---~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~~~f~~~~~ 327 (380)
T PLN03026 257 --SIIEYLWRAKQPYN---VSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYP--SDANFILCRV 327 (380)
T ss_pred --HHHHHHHHhcCCCC---CCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECC--CCCeEEEEEC
Confidence 67777765543322 233333333334532 12246667778888889999998865 44432 3456677776
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
.. +.+..++.+.|.++||.++.+.. +...+.+||++. + .++++++.++|++.
T Consensus 328 ~~-~~~~~~~~~~l~~~gI~v~~~~~-----~~~~~~lRis~~---~----~~~~~~l~~al~~~ 379 (380)
T PLN03026 328 TS-GRDAKKLKEDLAKMGVMVRHYNS-----KELKGYIRVSVG---K----PEHTDALMEALKQL 379 (380)
T ss_pred CC-CCCHHHHHHHHHHCCeEEEECCC-----CCCCCEEEEecC---C----HHHHHHHHHHHHHh
Confidence 53 34677888888899999965321 112458999865 3 78999999998753
No 128
>PLN02187 rooty/superroot1
Probab=99.91 E-value=9.4e-22 Score=197.90 Aligned_cols=342 Identities=13% Similarity=0.071 Sum_probs=213.6
Q ss_pred hcCeeEecCCCC------CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC--CCCCccceeee
Q 013217 20 FKSLELIASENF------TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQ 91 (447)
Q Consensus 20 ~~~i~l~~~~n~------~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g--~~~~~~~~~v~ 91 (447)
+..|.|..++.. +++.+.+++...+......+|. .......+.+.+.+++.+.++ ++++ +|.
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~lR~aiA~~~~~~~~~~~~~~----~I~ 135 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYG------PGAGILPARRAVADYMNRDLPHKLTPE----DIF 135 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC------CCCChHHHHHHHHHHHHHhcCCCCCcc----cEE
Confidence 356777666442 3567888888766542112232 122234455444556655554 4554 445
Q ss_pred cCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhC
Q 013217 92 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFR 169 (447)
Q Consensus 92 ~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~ 169 (447)
+|+|+ +++..++.++++|||+|++.+|.|+++.. .+...|. +++.+++.+ +++.+|++++++++++ +
T Consensus 136 it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~~~l~~~~~~~~d~~~l~~~~~~-~ 204 (462)
T PLN02187 136 LTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA--------RAAYSGL--EVRKFDLLPEKEWEIDLEGIEAIADE-N 204 (462)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH--------HHHHcCC--EEEEEeCccccCCccCHHHHHHhcCC-C
Confidence 58887 89999999999999999999998876421 2334554 444444432 4678999999998876 7
Q ss_pred CcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC---c--ccEEEeCCCccc--CCC
Q 013217 170 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---Y--CDVVTTTTHKSL--RGP 237 (447)
Q Consensus 170 ~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~---~--~Di~~~s~~K~l--~Gp 237 (447)
+++|+++.|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+....++. . .-+++.|++|++ +|+
T Consensus 205 ~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y-~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGl 283 (462)
T PLN02187 205 TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVY-DRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGW 283 (462)
T ss_pred cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCceeHHHhccCCcEEEEecchhhcCCccc
Confidence 8888888888886 444 678889999999999999995 55554332111221 1 136779999985 688
Q ss_pred CCceEEeecCCcchhhH---HHHhhhccCCC-CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCc
Q 013217 238 RGGMIFFKKDPVLGVEL---ESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 313 (447)
Q Consensus 238 ~gG~i~~~~~~~~~~~~---~~~i~~~~~~~-~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 313 (447)
|.||+++.++. .. .+.+.....+. ..++++.....++..+++......+++..+.+.++++.+.+.|++.+.
T Consensus 284 RiG~~v~~~p~----~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~ 359 (462)
T PLN02187 284 KIGWIALNDPE----GVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPC 359 (462)
T ss_pred eeEEEEecCch----hHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999985420 22 22333322221 222334444455555665322233467778888999999999988543
Q ss_pred Ee-eeCCCCCeeEEecCCC---CCC-CH-HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 314 KL-VSGGSDNHLVLVDLRP---MGI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 314 ~~-~~~~~~~~~~~v~~~~---~~~-~~-~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
.. ...+....++|+.+.. .++ +. +.+.+++.++||.+.. |.... ..++|||++.. . ++.++..
T Consensus 360 ~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~p----G~~fg-~~~~iRis~~~--~----~e~l~~a 428 (462)
T PLN02187 360 VVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLP----GDALG-LKNWMRITIGV--E----AHMLEDA 428 (462)
T ss_pred CcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEEC----ccccC-CCCeEEEEeCC--C----HHHHHHH
Confidence 22 2222345666776532 122 33 3456677899999954 33211 24689998642 2 6777888
Q ss_pred HHHHHHHHHHH
Q 013217 388 ADFIHEGVEIT 398 (447)
Q Consensus 388 ~~~i~~~l~~~ 398 (447)
.+.|.++++..
T Consensus 429 l~rL~~~l~~~ 439 (462)
T PLN02187 429 LERLKGFCTRH 439 (462)
T ss_pred HHHHHHHHHHh
Confidence 88887777644
No 129
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.91 E-value=8.2e-22 Score=190.10 Aligned_cols=318 Identities=22% Similarity=0.226 Sum_probs=223.7
Q ss_pred cCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC-CCCCccceeeecCCcH-
Q 013217 21 KSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGS- 96 (447)
Q Consensus 21 ~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g-~~~~~~~~~v~~~sGs- 96 (447)
..+.|.++||+. |+.+++++...+.. ..-||.. . ..+++ +.+++++| .+++ +|.++.|+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~--~~rYPd~------~-~~~l~----~a~a~~~~~~~~~----~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDK--LNRYPDP------D-YRELR----AALAEYYGVVDPE----NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHh--hccCCCC------c-HHHHH----HHHHHHhCCCCcc----eEEEcCChH
Confidence 358899999986 47788887766542 1233332 1 12333 56788888 6654 56669998
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+.+..++++++.|||+|++..|.|+.+-. .+...|. +++.++.++ +.+|++.+.+.+.+ ++++|+++
T Consensus 86 e~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~--------~a~~~g~--~~~~v~~~~--~~~d~~~~~~~~~~-~~~lv~i~ 152 (356)
T COG0079 86 ELIELLVRAFVEPGDTVLIPEPTFSMYEI--------AAQLAGA--EVVKVPLKE--FRLDLDAILAAIRD-KTKLVFLC 152 (356)
T ss_pred HHHHHHHHHhhcCCCEEEEcCCChHHHHH--------HHHhcCC--eEEEecccc--cccCHHHHHHhhhc-CCCEEEEe
Confidence 88888999999999999999988766521 2234454 555555653 88999999999988 89999999
Q ss_pred CCCCCC--CCChHHHHHHHHHh--CCEEEEehhhhccccccccCCCCCCcc--cEEEeCCCcc--cCCCCCceEEeecCC
Q 013217 177 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYC--DVVTTTTHKS--LRGPRGGMIFFKKDP 248 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~~~--g~~livD~a~~~g~~~~~~~~~~~~~~--Di~~~s~~K~--l~Gp~gG~i~~~~~~ 248 (447)
+||||+ .++.++|.+++... +.+|++|+|+ ..+....... .+... =+++-|++|. |+|.|.|+.+.++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY-~eF~~~~~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~-- 228 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAY-IEFSPESSLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP-- 228 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch-hhcCCchhhh-hccCCCCEEEEEecHHhhhcchhceeeccCCH--
Confidence 999997 67788888877755 7899999995 4433311111 01112 3788999997 4799999988888
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcE-eeeCCCCCeeEEe
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK-LVSGGSDNHLVLV 327 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~v 327 (447)
++.+.+++...|... +....++..++++.. +..++.++++.+.+.++.+.|...|+. +.. +..+++++
T Consensus 229 ----~~i~~l~~vr~p~~v---~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p--S~aNFvlv 297 (356)
T COG0079 229 ----ELIAALNKVRPPFNV---SSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP--SQANFVLV 297 (356)
T ss_pred ----HHHHHHHHhcCCCCC---CHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--CCCcEEEE
Confidence 899999888766533 223333333333322 335778899999999999999998754 443 33567788
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
++.. +. ...+.+.|.++||.++.... .+..+.++||+.. + ++|.+++.++|.+++.
T Consensus 298 ~~~~-~~-~~~l~~~L~~~giivR~~~~----~~~~~~~lRitvg---t----~een~~ll~AL~~~~~ 353 (356)
T COG0079 298 RVPD-AE-AAALAEALLKKGILVRDCSS----VGLLPGYLRITVG---T----PEENDRLLAALREVLK 353 (356)
T ss_pred ECCC-cc-HHHHHHHHHHCCEEEEeCCC----CCCCCCeEEEEeC---C----HHHHHHHHHHHHHHHh
Confidence 7754 22 45789999999999987521 1233568999865 2 7888999999998876
No 130
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.91 E-value=1e-22 Score=199.48 Aligned_cols=316 Identities=19% Similarity=0.193 Sum_probs=204.6
Q ss_pred HHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCCCCE
Q 013217 34 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDR 112 (447)
Q Consensus 34 ~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~pgd~ 112 (447)
.+.++++.+.+.+.+.. .....++++| +.+++++|.++ .+.++|||.|+.+++.++ ++|||+
T Consensus 5 ~e~~~~v~~~l~s~~~~--------~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gde 67 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLS--------TYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDE 67 (363)
T ss_dssp HHHHHHHHHHHHHTCCS--------SSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSE
T ss_pred HHHHHHHHHHHHhCCcc--------CCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCce
Confidence 45566777777664311 1135678888 57899999876 356699999999999998 799999
Q ss_pred EEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHH
Q 013217 113 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQI 192 (447)
Q Consensus 113 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~i 192 (447)
|+++...+.+... .+...| .+++.++++++++.+|++++++++++ ++|+|++.+ .++...|+++|.++
T Consensus 68 Vi~p~~t~~~~~~--------ai~~~G--~~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~h-~~G~~~d~~~i~~~ 135 (363)
T PF01041_consen 68 VIVPAYTFPATAS--------AILWAG--AEPVFVDIDPETLNIDPEALEKAITP-KTKAILVVH-LFGNPADMDAIRAI 135 (363)
T ss_dssp EEEESSS-THHHH--------HHHHTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHH
T ss_pred EecCCCcchHHHH--------HHHHhc--cEEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEec-CCCCcccHHHHHHH
Confidence 9999877655432 344555 48888889999999999999999998 899988863 34446699999999
Q ss_pred HHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCC--cccCCCCCceEEeecCCcchhhHHHHhhhccCCCCC---
Q 013217 193 ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ--- 267 (447)
Q Consensus 193 a~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~--K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~--- 267 (447)
|+++|++||.|++|+.|....+...-. ..|+.++|+| |.+.+..||+++++++ ++.+++......+..
T Consensus 136 ~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~-----~~~~~~~~~~~~g~~~~~ 208 (363)
T PF01041_consen 136 ARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP-----ELAERARALRNHGRSRDA 208 (363)
T ss_dssp HHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH-----HHHHHHHHHTBTTEETSE
T ss_pred HHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH-----HHHHHhhhhhccCcCccc
Confidence 999999999999999997665532222 3688888886 8898889999999986 777766543222210
Q ss_pred ----------C-CCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeC--CCC--C-eeEEecCC
Q 013217 268 ----------G-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--GSD--N-HLVLVDLR 330 (447)
Q Consensus 268 ----------g-~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~--~-~~~~v~~~ 330 (447)
| ...+..+.| +.++.++ ..+++..++..++++.+.+.|.+. ++..... ... + +.+.+-+.
T Consensus 209 ~~~~~~~~~~g~n~rm~~~~A-Aigl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~ 285 (363)
T PF01041_consen 209 FRRYRHELPPGYNFRMSELQA-AIGLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLP 285 (363)
T ss_dssp CSTTEESSSS--B-B-BHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEET
T ss_pred cccccccccCCcccccHHHHH-HHHHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccc
Confidence 0 011112211 1233333 346777888899999999999884 5544432 111 1 12223333
Q ss_pred CC-CCCHHHHHHHHhhcCeEEccCC-CCCCCCCC-C-----------------CCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 331 PM-GIDGARVEKILDMASITLNKNS-VPGDKSAL-V-----------------PGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 331 ~~-~~~~~~~~~~L~~~gI~v~~~~-~p~~~~~~-~-----------------~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
+. ..+.+.+.+.|.+.||.++..+ .|.+..+. . ...|.+.++. .|+++|++++++.
T Consensus 286 ~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~----~lt~edv~~I~~~ 361 (363)
T PF01041_consen 286 DEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHP----RLTEEDVDYIAEA 361 (363)
T ss_dssp CCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHST----TSCHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCC----CCCHHHHHHHhhc
Confidence 21 1357889999999999998754 23321110 0 0124443332 4669999999998
Q ss_pred HH
Q 013217 391 IH 392 (447)
Q Consensus 391 i~ 392 (447)
|+
T Consensus 362 ir 363 (363)
T PF01041_consen 362 IR 363 (363)
T ss_dssp HH
T ss_pred cC
Confidence 74
No 131
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=4.7e-22 Score=199.57 Aligned_cols=275 Identities=15% Similarity=0.151 Sum_probs=188.8
Q ss_pred eeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh
Q 013217 89 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 167 (447)
Q Consensus 89 ~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~ 167 (447)
+|.+|+|+ +++..++.++++|||.|++.+|.|+++.. .+...|. +++++++++ + .+|+++++++++.
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~~~~~l~~~~~~ 210 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN--------MLRYAGF--SASPVSVDA-E-GMQPEKLERALAQ 210 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--eEEeeccCC-C-CCCHHHHHHHHhc
Confidence 45568887 89999999999999999999998876532 2344554 566666653 2 4899999999876
Q ss_pred hCCcEEEEc-CCCCCC--CCChH---HHHHHHHHh-CCEEEEehhhhccccccccCCCCCC---cccEEEeCCCccc-CC
Q 013217 168 FRPKLIIAG-ASAYPR--DFDYP---RMRQIADAV-GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL-RG 236 (447)
Q Consensus 168 ~~~klii~~-~~~~~~--~~~~~---~i~~ia~~~-g~~livD~a~~~g~~~~~~~~~~~~---~~Di~~~s~~K~l-~G 236 (447)
++|+++++ .++||+ ..+.+ +|.++|+++ ++++++|+++ ..+...+. ..++. ..-+++.|++|++ +|
T Consensus 211 -~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y-~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~G 287 (431)
T PRK15481 211 -GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHF-ALLSSSPY-HSVIPQTTQRWALIRSVSKALGPD 287 (431)
T ss_pred -CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCch-hhhccCCC-CCCCcCCCCCEEEEeeeccccCCC
Confidence 89998887 788886 55654 999999999 9999999985 33332221 22222 1348889999987 56
Q ss_pred CCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc-ChhHHHHHHHHHHHHHHHHHHHHHCCcEe
Q 013217 237 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVELGYKL 315 (447)
Q Consensus 237 p~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 315 (447)
.|.||++.++ ++.+.+.........+ .+.....+++.+++.-. ....++..+.+.++++.+.+.|.+.|+.+
T Consensus 288 lRiG~~i~~~------~~~~~~~~~~~~~~~~-~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~ 360 (431)
T PRK15481 288 LRLAFVASDS------ATSARLRLRLNSGTQW-VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAI 360 (431)
T ss_pred ceeEEEeCCH------HHHHHHHHHHhccccC-CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 7779999987 6777765433322222 23333334444554311 01135567778888889999998888765
Q ss_pred eeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 316 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 316 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
..+ ...+++|++++. +..++.+.|.++||.+..+...+.. ...+++||++.... ++++++.++.|.+++
T Consensus 361 ~~p-~gg~f~~~~l~~---~~~~~~~~l~~~gV~v~pg~~f~~~--~~~~~iRis~~~~~-----~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 361 PSP-GDGLNLWLPLDT---DSQATALTLAKSGWLVREGEAFGVS--APSHGLRITLSTLN-----DAEINRLAADLHQAL 429 (431)
T ss_pred ccC-CCeEEEEEECCC---CHHHHHHHHHHCCcEEecCCccccC--CCCCeEEEEcCCCC-----hHHHHHHHHHHHHHh
Confidence 333 346778888753 3567888888899999654322111 11357999976433 789999999998876
Q ss_pred H
Q 013217 396 E 396 (447)
Q Consensus 396 ~ 396 (447)
+
T Consensus 430 ~ 430 (431)
T PRK15481 430 N 430 (431)
T ss_pred c
Confidence 4
No 132
>PRK06855 aminotransferase; Validated
Probab=99.91 E-value=1.2e-21 Score=196.12 Aligned_cols=344 Identities=16% Similarity=0.123 Sum_probs=209.0
Q ss_pred cCeeEecCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecC
Q 013217 21 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPL 93 (447)
Q Consensus 21 ~~i~l~~~~n-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~ 93 (447)
..+.|.-++. .+|+.+.+++...+.+.-..+|+.. ....++.+...+++.+.+|.+ ++ +|.+|
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~------~G~~~LReaia~~~~~~~g~~~~~~----~I~it 102 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPT------KGVLETREFLAELNNKRGGAQITPD----DIIFF 102 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCC------CCCHHHHHHHHHHHHhccCCCCCHh----HEEEc
Confidence 4567754544 4678888888776543211233322 222345555556777766654 43 45568
Q ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhh-hCC
Q 013217 94 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL-FRP 170 (447)
Q Consensus 94 sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~-~~~ 170 (447)
+|+ +++..++ .+++|||.|++.+|.|+++.. ......+.+++++++++ +++.+|+++|+++++. .++
T Consensus 103 ~G~~~al~~~~-~l~~~Gd~Vlv~~P~Y~~~~~---------~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (433)
T PRK06855 103 NGLGDAIAKIY-GLLRREARVIGPSPAYSTHSS---------AEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSI 172 (433)
T ss_pred CcHHHHHHHHH-HhcCCCCeEEEeCCCCchHHH---------HHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCc
Confidence 988 7877776 488999999999998876421 11111223556666664 3467999999999874 257
Q ss_pred cEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC----Cc-ccEEEeCCCccc--CCCC
Q 013217 171 KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KY-CDVVTTTTHKSL--RGPR 238 (447)
Q Consensus 171 klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~----~~-~Di~~~s~~K~l--~Gp~ 238 (447)
++++++.|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+....++ +. ..+++.|++|++ +|+|
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlR 251 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIY-NNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSR 251 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcce
Confidence 888888888886 444 567888899999999999995 5555433211121 11 238889999987 6889
Q ss_pred CceEEeecCC--cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc-ChhHHHHHHHHHHHHHHHHHHHHHC-CcE
Q 013217 239 GGMIFFKKDP--VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 239 gG~i~~~~~~--~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
.||++.++.. .....+.+.+...... ..+ ++.....++..+++.-. ....++..+.+.++++.+.+.|.+. |+.
T Consensus 252 iG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~ 329 (433)
T PRK06855 252 CGWIEVYNADKDEVFKKYINSILNAKMI-EVC-STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK 329 (433)
T ss_pred EEEEEEeCCchhhHHHHHHHHHHHhhcc-ccC-CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 9999984210 0000222333222111 112 23333333344443211 1123556677788888888988774 665
Q ss_pred eeeCCCCCeeEEecCCCCC--------------------------CCHHH-HHHHHhhcCeEEccCCCCCCCCCCCCCeE
Q 013217 315 LVSGGSDNHLVLVDLRPMG--------------------------IDGAR-VEKILDMASITLNKNSVPGDKSALVPGGI 367 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~~~--------------------------~~~~~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 367 (447)
+..+ ..++++|++++..- .+..+ +...+++.||.+. ||+.......++
T Consensus 330 ~~~p-~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~----PG~~F~~~~~~~ 404 (433)
T PRK06855 330 VNRT-NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVV----PLSSFCTELNGF 404 (433)
T ss_pred ccCC-CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEe----cCCcCCCCCCce
Confidence 4432 44677888886420 11233 3456788999994 444321123469
Q ss_pred EEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 368 RIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 368 Rig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
||++... + ++++++..+.|.+++..
T Consensus 405 Rls~~~~-~----~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 405 RVTLLER-D----EEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEEECCC-c----HHHHHHHHHHHHHHHHH
Confidence 9997642 3 78898888888888764
No 133
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.91 E-value=4.3e-22 Score=195.08 Aligned_cols=319 Identities=13% Similarity=0.110 Sum_probs=206.3
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCC
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 109 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~p 109 (447)
.+++..++++...+.+.+. ++..+...++| +++++++|.+. .+.++||++|+..++.++ ++|
T Consensus 8 ~~~~~e~~a~~~~~~~~~~--------~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p 70 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGKL--------SGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP 70 (376)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 4566778888877765331 11124456666 57888888864 244567779998888888 899
Q ss_pred CCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHH
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRM 189 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i 189 (447)
||+|+++++.|.+... .+...|. +++.++++++++.+|++++++++++ +||+|+.+. .++...|+++|
T Consensus 71 Gd~Viv~~~t~~~~~~--------~~~~~G~--~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~~I 138 (376)
T TIGR02379 71 GDEVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMDTI 138 (376)
T ss_pred cCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHHHH
Confidence 9999999988766532 2234454 6667778766788999999999987 899987654 34457899999
Q ss_pred HHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCCc--cc-CCCCCceEEeecCCcchhhHHHHhhhccCCC
Q 013217 190 RQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHK--SL-RGPRGGMIFFKKDPVLGVELESAINNAVFPG 265 (447)
Q Consensus 190 ~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K--~l-~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~ 265 (447)
.++|+++|+++|+|++|+.|....+. +++ ..|+.++|+|+ .+ +|++||+++++++ ++.+++......|
T Consensus 139 ~~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~-----~~~~~~~~~~~~g 210 (376)
T TIGR02379 139 MALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQ-----AFIERAEIIREKG 210 (376)
T ss_pred HHHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCH-----HHHHHHHHHHHhC
Confidence 99999999999999999887544332 222 35788888875 45 5779999998865 6666655322111
Q ss_pred C-----------------CC-CCcHHHH-HHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC---C-cEeee--CCC
Q 013217 266 L-----------------QG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLVS--GGS 320 (447)
Q Consensus 266 ~-----------------~g-~p~~~~~-aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~--~~~ 320 (447)
. .| ...+..+ |++. +.++ ..+++..++.+++++.+.+.|.+. + +.+.. ++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g--~~qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~ 286 (376)
T TIGR02379 211 TNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYL--WAQL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGC 286 (376)
T ss_pred CCCccccccCCCcceeeeecccCCccHHHHHHH--HHHH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCC
Confidence 0 01 1111112 2222 2222 235666777888888888888653 2 22211 111
Q ss_pred --CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCC----CC-------------CCeEEEecCccccCCCCH
Q 013217 321 --DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA----LV-------------PGGIRIGSPAMTTRGFSE 381 (447)
Q Consensus 321 --~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~----~~-------------~~~iRig~~~~~~~g~~~ 381 (447)
..+++++.+.. +.+.+++.+.|.++||.++..+.|.+..+ +. ...|.+.++ -+|++
T Consensus 287 ~~~~~~~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~----~~l~~ 361 (376)
T TIGR02379 287 QHNAHMFYIKLKD-EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLY----YGLSK 361 (376)
T ss_pred eeeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCC----CCCCH
Confidence 12344455433 34678999999999999876555554321 10 112333322 25779
Q ss_pred HHHHHHHHHHHHHH
Q 013217 382 KEFVAIADFIHEGV 395 (447)
Q Consensus 382 ~di~~l~~~i~~~l 395 (447)
+|++++++.|++++
T Consensus 362 ~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 362 EDQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 134
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=4e-22 Score=193.45 Aligned_cols=319 Identities=16% Similarity=0.162 Sum_probs=201.6
Q ss_pred eeEecCCCC-CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHH
Q 013217 23 LELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 101 (447)
Q Consensus 23 i~l~~~~n~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~ 101 (447)
|.|..++|+ +||.+++++....... .+ |+......+++ +.+++++|.++. +.+++|++++..
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~-------~~-Y~~~~~~~~L~----~~la~~~g~~~~-----~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD-------DV-YGDDPTVNALQ----DYAAELSGKEAA-----LFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC-------cc-cCCCHHHHHHH----HHHHHHhCCCeE-----EEeCchHHHHHH
Confidence 556667775 5789999986533321 12 33334455666 578889998763 334677788888
Q ss_pred HHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcEEEEc
Q 013217 102 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG 176 (447)
Q Consensus 102 ~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-----~~klii~~ 176 (447)
++.+++.|||+|+++.+.|...+..+ .....+ ..+.++++++ +++.+|+++|++++++. ++++|+++
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 88888999999998776653221110 011222 1344555555 46889999999988653 58899988
Q ss_pred CCCCCCCCChH---HHHHHHHHhCCEEEEehhhhcccccc-ccCCCCC-CcccEEEeCCCcccCCCCCceEEeecCCcch
Q 013217 177 ASAYPRDFDYP---RMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 251 (447)
Q Consensus 177 ~~~~~~~~~~~---~i~~ia~~~g~~livD~a~~~g~~~~-~~~~~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~ 251 (447)
+++++...+.+ +|.++|+++|+++++|+++..+.... +.....+ .+.|.++.|+||.++.+.||+++.++
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~----- 211 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR----- 211 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH-----
Confidence 77765566654 55678899999999999976432110 1100001 13466667899988766666787776
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCC
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 331 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~ 331 (447)
++.+.+.....+.. ++.+....+ .++++..+. ...+++++..++++++.+.|.+.|+++..+ .++++++++..
T Consensus 212 -~~i~~~~~~~~~~~-~~~~~~~~~-~a~~~~~l~--~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~nfv~~~~~~ 284 (333)
T PRK10534 212 -DYIKRARRWRKMTG-GGMRQAGIL-AAAGLYALK--HNVARLQEDHDNAAWLAEQLREAGADVMRQ--DTNMLFVRVGE 284 (333)
T ss_pred -HHHHHHHHHHHHhC-CchhhHHHH-HHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhCCCccCCC--CceEEEEECCc
Confidence 67777765433221 111211111 111222221 123445566677889999999999887643 46677777753
Q ss_pred CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 332 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 332 ~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
.+..++.+.|.++||.++. + ..+|++...-. ++++++++.+.|++.+
T Consensus 285 --~~~~~~~~~l~~~gi~v~~----~-------~~~rl~~~~r~----t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 285 --EQAAALGEYMRERNVLINA----S-------PIVRLVTHLDV----SREQLAEVVAHWRAFL 331 (333)
T ss_pred --hhHHHHHHHHHHcCeeecC----C-------ceEEEEEEeCC----CHHHHHHHHHHHHHHh
Confidence 2456788999999999953 2 15888764323 4999999999997654
No 135
>PRK09105 putative aminotransferase; Provisional
Probab=99.91 E-value=1.1e-21 Score=192.61 Aligned_cols=311 Identities=17% Similarity=0.128 Sum_probs=209.8
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
..+.|..++|+ +|+.+++++...+.. ...||. .. ..++ ++.+++.+|+++++ |.+++|+ +
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~------~~-~~~L----r~aia~~~~v~~e~----I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAAL--SGRYDL------EL-EDDL----RTLFAAQEGLPADH----VMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCC------ch-HHHH----HHHHHHHhCcChhh----EEEcCChHH
Confidence 45788888884 578999998876532 112221 11 2333 35677888998864 4458887 8
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
++..++.++++|||+|++++|.|+++.. .+...|. +++.++.+ +++.+|++++++. .+ ++++|++++
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~-~~-~~~~v~l~n 173 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGWR--------AADAQGA--PVAKVPLR-ADGAHDVKAMLAA-DP-NAGLIYICN 173 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEecCC-CCCCCCHHHHHhc-CC-CCCEEEEeC
Confidence 9999999999999999999998876532 2334454 55555565 3577999999876 34 789999988
Q ss_pred CCCCC--CCChHHHHHHHHH--hCCEEEEehhhhccccccccCCCCCC----ccc-EEEeCCCccc--CCCCCceEEeec
Q 013217 178 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK 246 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~--~g~~livD~a~~~g~~~~~~~~~~~~----~~D-i~~~s~~K~l--~Gp~gG~i~~~~ 246 (447)
|+||+ ..+.+++.++++. +|+++|+|+++. .+... ++... +.+ +++.|++|++ +|.|.|++++++
T Consensus 174 P~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~ 249 (370)
T PRK09105 174 PNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP 249 (370)
T ss_pred CCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-HhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH
Confidence 88886 7788888887764 489999999973 22211 11111 223 6678999986 578889999987
Q ss_pred CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEE
Q 013217 247 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 326 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 326 (447)
++.+.+... .. ..++.....+...++.. ....++..+++.++++.+.+.|.+.|+++..+ ..+ +++
T Consensus 250 ------~~i~~l~~~-~~---~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~~-f~~ 315 (370)
T PRK09105 250 ------DLLAKLARF-GH---NPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPS-QAN-CFM 315 (370)
T ss_pred ------HHHHHHHhc-CC---CCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC-CCc-EEE
Confidence 677777654 11 12333333333334432 12336667788888999999999888876543 233 445
Q ss_pred ecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+++. .+..++.+.|.+.||.+.... + ..++++|+++. + +++++++.++|++++
T Consensus 316 ~~~~---~~~~~l~~~L~~~gI~v~~~~-~-----~~~~~~Ris~~---~----~~~~~~l~~al~~~~ 368 (370)
T PRK09105 316 VDVK---RPAKAVADAMAKQGVFIGRSW-P-----IWPNWVRVTVG---S----EEEMAAFRSAFAKVM 368 (370)
T ss_pred EeCC---CCHHHHHHHHHHCCcEEecCC-C-----CCCCeEEEEcC---C----HHHHHHHHHHHHHHh
Confidence 6653 356788888888899984321 1 12468999955 3 788999999988765
No 136
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.91 E-value=1.1e-21 Score=190.74 Aligned_cols=313 Identities=17% Similarity=0.197 Sum_probs=210.6
Q ss_pred cccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccc
Q 013217 56 RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV 135 (447)
Q Consensus 56 ~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~ 135 (447)
..|+|.+....+| +.+++++|.++ .|.++||+.|+..++...++|||.| +...+... . ...+
T Consensus 72 d~Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~T---t----~ahI 133 (460)
T PRK13237 72 EAYAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTT---T----RYHQ 133 (460)
T ss_pred hhhcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHh---h----HHHH
Confidence 3356677788898 57888999986 3556899999887766568999976 32222111 0 0112
Q ss_pred ccccceeEEEecc---------cCCCCCCCCHHHHHHHhhhhC---CcEEEEc--CCCCCC-C---CChHHHHHHHHHhC
Q 013217 136 SGTSIYFESMPYR---------LDESTGLVDYDMLEKTAILFR---PKLIIAG--ASAYPR-D---FDYPRMRQIADAVG 197 (447)
Q Consensus 136 ~~~g~~~~~~~~~---------~~~~~~~id~~~l~~~~~~~~---~klii~~--~~~~~~-~---~~~~~i~~ia~~~g 197 (447)
...|. .++.+. .++.++.+|+++|++++++.. +++|.+. .+.+++ + .+++++.++|++||
T Consensus 134 ~~~Ga--~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~G 211 (460)
T PRK13237 134 ELNGG--IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHG 211 (460)
T ss_pred HhCCc--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcC
Confidence 33343 233221 235678999999999997632 2333332 222323 3 37899999999999
Q ss_pred CEEEEehhhhcc---cc---ccccCCCC--------CCcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhc--
Q 013217 198 ALLMMDMAHISG---LV---AASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA-- 261 (447)
Q Consensus 198 ~~livD~a~~~g---~~---~~~~~~~~--------~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~-- 261 (447)
++|+.|+||+.| ++ ..+....+ +.++|.+++|+||.+.++.||+|+++++ ++.++++..
T Consensus 212 l~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-----eL~~~~r~~~~ 286 (460)
T PRK13237 212 IKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-----ELFDEAKELVV 286 (460)
T ss_pred CEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-----HHHHHHHHhcc
Confidence 999999999988 33 11222222 2368999999999999999999999986 888888765
Q ss_pred cCCCC--CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC-------
Q 013217 262 VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM------- 332 (447)
Q Consensus 262 ~~~~~--~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~------- 332 (447)
.++|+ +|+...-.+.|+++++.+.... +|.++..++.++|.+.|.+.|++++.+ +..|.+++|....
T Consensus 287 ~~eG~~tygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~Gvpv~~p-~ggH~v~vda~~~lph~~~~ 362 (460)
T PRK13237 287 VYEGMPSYGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAGVPIVEP-VGGHAVFLDARRFLPHLPQD 362 (460)
T ss_pred ccCCCcCCCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCCCceecC-CCceEEEEEhHHhCCCCCcc
Confidence 45554 3444445788999999887643 678888999999999999999999875 4578888875431
Q ss_pred CCCHHHHHHHH-hhcCeEEc-cCCC-----CCCCCCCCC--CeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 333 GIDGARVEKIL-DMASITLN-KNSV-----PGDKSALVP--GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 333 ~~~~~~~~~~L-~~~gI~v~-~~~~-----p~~~~~~~~--~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
...++.+...| .+.||... .+++ |.......+ .-+|+..|. |-.+.+.|+++++.+..+.++...
T Consensus 363 ~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~~~ 436 (460)
T PRK13237 363 QFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPR---RVYTYAHMDVVADSVIKLYKHRED 436 (460)
T ss_pred cChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeecccc---ccccHHHHHHHHHHHHHHHHhHhh
Confidence 12344454444 56777532 1221 211111111 358987653 445689999999999998887643
No 137
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=2.4e-21 Score=196.66 Aligned_cols=330 Identities=14% Similarity=0.074 Sum_probs=204.2
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcH-HHHHHHHHHhc-C
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-PANFEVYTAIL-K 108 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs-~a~~~~~~al~-~ 108 (447)
|..+++++...+... . + +...|+......++.+...+++.+..|.+ ++ +|.+|+|+ +++..++.+++ +
T Consensus 90 P~~~~~~~~~~~~~~-~-~--~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~----~I~it~Ga~~al~~~~~~l~~~ 161 (481)
T PTZ00377 90 PADVVARAKEYLNAI-G-G--GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPS----DIFLTDGASSGIKLLLQLLIGD 161 (481)
T ss_pred CHHHHHHHHHHHHhC-C-C--cccCcCcccCCHHHHHHHHHHHHHhcCCCCChh----hEEEcCCHHHHHHHHHHHhccC
Confidence 557777776554431 1 0 11112333334456655566777666654 43 45568887 89999999998 7
Q ss_pred CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhh-----CCcEEEEcCCCCCC
Q 013217 109 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR 182 (447)
Q Consensus 109 pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~-----~~klii~~~~~~~~ 182 (447)
|||+|++.+|.|.++.. .+...|. ++++++++++ ++.+|++++++++++. +||+|+++.|+||+
T Consensus 162 ~gD~Vlv~~P~y~~y~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPT 231 (481)
T PTZ00377 162 PSDGVMIPIPQYPLYSA--------AITLLGG--KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPT 231 (481)
T ss_pred CCCEEEECCCCchhHHH--------HHHHcCC--EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCC
Confidence 99999999998876532 2345554 5556666643 4689999999988642 78988887788886
Q ss_pred --CCC---hHHHHHHHHHhCCEEEEehhhhccccccc--cCCCC------CC-c-----ccEEEeCCCccc---CCCCCc
Q 013217 183 --DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP------FK-Y-----CDVVTTTTHKSL---RGPRGG 240 (447)
Q Consensus 183 --~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~--~~~~~------~~-~-----~Di~~~s~~K~l---~Gp~gG 240 (447)
..+ +++|.++|+++|+++|+|+++ ..+.+.+ .+.+. +. . .-+++.|++|++ +|+|.|
T Consensus 232 G~~~s~e~~~~i~~~a~~~~~~iI~De~Y-~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG 310 (481)
T PTZ00377 232 GQVLTRDVMEEIIKFCYEKGIVLMADEVY-QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGG 310 (481)
T ss_pred CcCCCHHHHHHHHHHHHHCCCEEEEehhh-HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceE
Confidence 555 789999999999999999996 4444321 11110 11 0 126778999974 589999
Q ss_pred eEEe---ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHh--cCh---hH----HHHHHHHHHHHHHHHHHH
Q 013217 241 MIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSP---EF----KVYQNKVVSNCRALASRL 308 (447)
Q Consensus 241 ~i~~---~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~--~~~---~~----~~~~~~~~~~~~~l~~~L 308 (447)
|+++ ++ ++.+.+...... ..+ ++.....+...+++.. ... .+ +...+.+.++++.+.+.|
T Consensus 311 ~~~~~~~p~------~li~~l~~~~~~-~~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L 382 (481)
T PTZ00377 311 YFELTNIPP------EVREQIYKLASI-NLC-SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDEL 382 (481)
T ss_pred EEEEeCCCH------HHHHHHHHHhhe-ecC-CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 44 677777654322 222 3333333334444310 011 12 222233567778888888
Q ss_pred HHC-CcEeeeCCCCCeeEEecCCC-CC---------C--CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccc
Q 013217 309 VEL-GYKLVSGGSDNHLVLVDLRP-MG---------I--DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 375 (447)
Q Consensus 309 ~~~-g~~~~~~~~~~~~~~v~~~~-~~---------~--~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~ 375 (447)
.+. |+++..+ ...+++|+++.. .+ + +...+...|++.||.+..+...+. ....+++|+++. +
T Consensus 383 ~~~~g~~~~~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~--~~~~~~~Rls~~--~ 457 (481)
T PTZ00377 383 NKIEGVSCQPV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQ--KPGTYHFRITIL--P 457 (481)
T ss_pred hcCCCcEeecC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC--CCCCCEEEEEEC--C
Confidence 874 7777643 345667766531 11 1 112346778889999954322211 112358999975 4
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 013217 376 TRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 376 ~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+ ++++++..+.|.++++..
T Consensus 458 ~----~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 458 P----EEQIEEMVKKIKEFHESF 476 (481)
T ss_pred C----HHHHHHHHHHHHHHHHHH
Confidence 4 788888888888877643
No 138
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.91 E-value=5.5e-21 Score=190.16 Aligned_cols=338 Identities=18% Similarity=0.114 Sum_probs=207.9
Q ss_pred hhcCeeEecCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC------CCCcc
Q 013217 19 QFKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL------DENKW 86 (447)
Q Consensus 19 ~~~~i~l~~~~n------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~------~~~~~ 86 (447)
..+.++|..+.. ++++.+++++...+......+|+.. .....+. +.++++++. +++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~------~g~~~lr----~~ia~~l~~~~~~~~~~~-- 97 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPS------VGALAAR----EAVAEYLSSDLPGKLTAD-- 97 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCC------CCCHHHH----HHHHHHHHhhcCCCCCHH--
Confidence 456788876653 4578999999887765432334221 1122333 344445542 333
Q ss_pred ceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHH
Q 013217 87 GVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKT 164 (447)
Q Consensus 87 ~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~ 164 (447)
+|..++|+ +|+..++.++.++||+|++.+|.|..+.. .+...|. +++.+++++ +++.+|+++++++
T Consensus 98 --~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~ 165 (403)
T TIGR01265 98 --DVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDT--------RAAFSGL--EVRLYDLLPEKDWEIDLDGLEAL 165 (403)
T ss_pred --HEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEecCCcccCCccCHHHHHHH
Confidence 34446665 89999999999999999999988764321 1233443 445555543 3568999999998
Q ss_pred hhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----c-ccEEEeCCCccc
Q 013217 165 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKSL 234 (447)
Q Consensus 165 ~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----~-~Di~~~s~~K~l 234 (447)
+.+ +++++++++++||+ ..+ +++|.++|+++|+++++|+++ ..+.+.+....++. . --+++.|++|.+
T Consensus 166 ~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 243 (403)
T TIGR01265 166 ADE-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIY-GHMVFGDAPFIPMASFASIVPVLSLGGISKRW 243 (403)
T ss_pred hCc-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCccchhhhccCCcEEEEeeccccc
Confidence 876 78999888777775 444 789999999999999999985 44443331111111 1 126779999984
Q ss_pred --CCCCCceEEeecCCc-chhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC
Q 013217 235 --RGPRGGMIFFKKDPV-LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 235 --~Gp~gG~i~~~~~~~-~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (447)
+|.|.|++++.++.. ...++.+.+...... .. +++.....++..++.......+++..+++.++++.+.+.|+..
T Consensus 244 ~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (403)
T TIGR01265 244 VVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR-IL-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDI 321 (403)
T ss_pred CCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh-hc-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 677889999853200 000133333332111 11 2333344444445543222234667788888889999999875
Q ss_pred -CcEeeeCCCCCeeEEecCCCCC----CCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHH
Q 013217 312 -GYKLVSGGSDNHLVLVDLRPMG----IDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 312 -g~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~ 385 (447)
|+.+..+ ..+.++|+++.... .+..++.+. ++++||.+..+...+ ..++||+++.. . ++.++
T Consensus 322 ~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-----~~~~iRis~~~--~----~~~l~ 389 (403)
T TIGR01265 322 PGLVCPKP-EGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG-----LPNWVRITITV--P----ESMLE 389 (403)
T ss_pred CCceecCC-CceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC-----CCCeEEEEecC--C----HHHHH
Confidence 7764333 45667788775321 245666555 578999995432221 25689999652 2 56666
Q ss_pred HHHHHHHHHHH
Q 013217 386 AIADFIHEGVE 396 (447)
Q Consensus 386 ~l~~~i~~~l~ 396 (447)
+..+.|.++++
T Consensus 390 ~~l~~l~~~~~ 400 (403)
T TIGR01265 390 EACSRIKEFCE 400 (403)
T ss_pred HHHHHHHHHHH
Confidence 66666666553
No 139
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=4.4e-22 Score=195.41 Aligned_cols=315 Identities=16% Similarity=0.113 Sum_probs=204.7
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeec-CCcH-
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGS- 96 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~-~sGs- 96 (447)
..|+|..++|+ .+|.+++++...+... .+||.. . ..++ ++.+++++|++++. +.+ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~~------~-~~~l----r~~ia~~~~~~~~~----i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKI--HRYPEP------D-APEL----REALSKYTGVPVEN----IIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhh--cCCCCC------C-HHHH----HHHHHHHhCCCHHH----EEEeCCCHH
Confidence 45888888775 4678888887655431 234332 1 1334 35678888988753 334 6887
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.++++|||+|++.+|.|..+.. .+...|. +++.++.+ +++.+|++++++.++. ++++|+++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~~ 165 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYEI--------SAKAHGA--KPVYAKRE-EDFSLDVDSVLNAITE-KTKVIFLC 165 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence 67777888889999999999987654321 1233454 44555444 4568999999998876 89998888
Q ss_pred CCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCc--ccEEEeCCCcccC--CCCCceEEeecCCcc
Q 013217 177 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY--CDVVTTTTHKSLR--GPRGGMIFFKKDPVL 250 (447)
Q Consensus 177 ~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~--~Di~~~s~~K~l~--Gp~gG~i~~~~~~~~ 250 (447)
+++||+ ..+.+++.++|+++|+++++|++|. ++....... .... .-+++.|++|.++ |.|.|++++++
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~---- 239 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFAEYDYTP-LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE---- 239 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhCccchHH-HHHhcCCEEEEEeehHhhcCchhhcchhcCCH----
Confidence 777775 7899999999999999999999974 332111100 0111 2377789999874 66779999987
Q ss_pred hhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecC
Q 013217 251 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 329 (447)
Q Consensus 251 ~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~ 329 (447)
++.+.+.....+.. .+....++...++. ..+ +++..++..++++.+.+.|. +.+.. +.+.++|+++
T Consensus 240 --~~~~~~~~~~~~~~---~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~~~~~--~~~~~i~~~~ 306 (361)
T PRK00950 240 --WLIDYYMRAKTPFS---LTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---FKVYP--SEANFVLVDV 306 (361)
T ss_pred --HHHHHHHHhcCCCC---CCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---eeECC--CcceEEEEEC
Confidence 67766665433322 22222322222332 223 34445555555555555553 55433 3456678877
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
. +.+..++.+.|.++||.+..+... ....++++|+++. + .+|++++.++|++++
T Consensus 307 ~--~~~~~~~~~~l~~~gv~v~~~~~f---~~~~~~~lRis~~---~----~~~~~~l~~~L~~il 360 (361)
T PRK00950 307 T--PMTAKEFCEELLKRGVIVRDCTSF---RGLGDYYIRVSIG---T----FEENERFLEILKEIV 360 (361)
T ss_pred C--CCCHHHHHHHHHHCCEEEeeCCcc---CCCCCCeEEEECC---C----HHHHHHHHHHHHHHh
Confidence 3 457788999998899999653211 1123468999965 3 789999999998765
No 140
>PRK03321 putative aminotransferase; Provisional
Probab=99.91 E-value=5.4e-22 Score=194.06 Aligned_cols=314 Identities=17% Similarity=0.148 Sum_probs=211.7
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
+.|+|..+++. .++.+++++.+.+.. ...||.. | ...++ +.+++++|++++ +|.+++|+ +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~----g---~~~lr----~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG--VNRYPDM----G---AVELR----AALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh--cCcCCCC----c---HHHHH----HHHHHHhCcCHH----HEEECCCHHH
Confidence 45788877774 467899998876643 1234321 1 23443 577888888765 34458888 6
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
++..++.++++|||+|++..|.+..+.. .+...|. +++.++.++ ++.+|++++++.+++ ++++|+++.
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAYPI--------LVQVAGA--TPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHHHH--------HHHHcCC--EEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 7777788889999999998876543211 1233444 555666653 477999999999876 899999887
Q ss_pred CCCCC--CCChHHHHHHHHH--hCCEEEEehhhhccccccccCCCCCC----c-ccEEEeCCCccc--CCCCCceEEeec
Q 013217 178 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKSL--RGPRGGMIFFKK 246 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~--~g~~livD~a~~~g~~~~~~~~~~~~----~-~Di~~~s~~K~l--~Gp~gG~i~~~~ 246 (447)
++||+ ..+.+++.++|+. +|+++++|+++. .+...+..+.++. . --+++.|++|.+ +|.|.|++++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYV-EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHH-HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 88876 7799999999987 599999999963 4443322111111 1 236778999987 477889999987
Q ss_pred CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEE
Q 013217 247 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 326 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 326 (447)
++.+.+.+...+. +.+.....+...++.. ...+.+..++..++++.+.+.|.+.|+.+..+ ...++|
T Consensus 233 ------~~~~~~~~~~~~~---~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~--~g~~i~ 299 (352)
T PRK03321 233 ------EVIAALRKVAVPF---SVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPPS--QANFVW 299 (352)
T ss_pred ------HHHHHHHHhcCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--CCCEEE
Confidence 7777776643222 2233333323334432 23345556667777788889998888765432 345677
Q ss_pred ecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+++.. +..++.+.|.++||.+.. . ...+|||++ ++ .++++++.++|++++.
T Consensus 300 i~l~~---~~~~~~~~l~~~gI~v~~----~-----~~~~iRi~~---~~----~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 300 LPLGE---RTADFAAAAAEAGVVVRP----F-----AGEGVRVTI---GA----PEENDAFLRAARAWRA 350 (352)
T ss_pred EeCCC---CHHHHHHHHHHCCEEEEc----c-----CCCcEEEee---CC----HHHHHHHHHHHHHHhc
Confidence 77632 467788889999999853 1 234699985 34 8999999999987653
No 141
>PRK09148 aminotransferase; Validated
Probab=99.91 E-value=8.4e-21 Score=188.76 Aligned_cols=340 Identities=13% Similarity=0.083 Sum_probs=209.2
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
+..|+|..+++. +|+.+++++.+.+.+....+|+.. .| ...+.+...+++.+.+|.+ +++ +|.+|+|
T Consensus 30 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G---~~~lr~aia~~~~~~~g~~~~~~~---~I~it~G 100 (405)
T PRK09148 30 ADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSAS---KG---IPGLRRAQAAYYARRFGVKLNPDT---QVVATLG 100 (405)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCCCC---cEEEcCC
Confidence 456888766663 467888887766543211233332 11 2345545556666666754 431 3556888
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCC-CCCCHHHHHHHhhhhCCcEE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~id~~~l~~~~~~~~~kli 173 (447)
+ +++..++.+++++||+|++.+|.|.++.. .+...|. ++++++++.++ +..+++++.+...+ ++++|
T Consensus 101 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v 169 (405)
T PRK09148 101 SKEGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGG--VIRSVPAEPDEEFFPALERAVRHSIP-KPIAL 169 (405)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCC--EEEEEeCCCCCCCccCHHHHHhhccc-cceEE
Confidence 7 89999999999999999999998876532 1234454 55555565332 33444444333333 78899
Q ss_pred EEcCCCCCC--CCCh---HHHHHHHHHhCCEEEEehhhhcccccccc-CCCC--CC---cccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK---YCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~~~---~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~--~~---~~Di~~~s~~K~l--~Gp~gG 240 (447)
+++.|+||+ ..+. ++|.++|+++|+++++|+++. .+.+.+. .++. ++ ...+++.|++|.+ +|.|.|
T Consensus 170 ~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G 248 (405)
T PRK09148 170 IVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYS-EIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMG 248 (405)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccch-hhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchhee
Confidence 998888886 5554 678889999999999999963 3333221 1111 11 1236789999986 578889
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 320 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 320 (447)
|++.++ ++.+.+.........+.+...+. ++..++... ....++..+.+.++++.+.+.|.+.|+.+..+ .
T Consensus 249 ~~v~~~------~~i~~l~~~~~~~~~~~~~~~q~-~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~ 319 (405)
T PRK09148 249 FAVGNE------RLIAALTRVKSYLDYGAFTPIQV-AATAALNGP-QDCIAEMRELYKKRRDVLVESFGRAGWDIPPP-A 319 (405)
T ss_pred eeeCCH------HHHHHHHHHHHHhccCCChHHHH-HHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-C
Confidence 999877 67777765432111222222222 223344321 12346667788888999999998888765433 3
Q ss_pred CCeeEEecCCCC--CCCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPM--GIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 321 ~~~~~~v~~~~~--~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
...++|++++.. ..+..++.+. +++.||.+..+...+ ...++++||++. .. .+++++..+.|.+++..
T Consensus 320 ~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~---~~~~~~~Ri~~~--~~----~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 320 ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFG---EHGDGYVRIALV--EN----EQRIRQAARNIKRFLSS 390 (405)
T ss_pred eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCeEEEEec--CC----HHHHHHHHHHHHHHHHH
Confidence 456678887542 1234566555 567999996542211 112468999874 23 67777777777777764
Q ss_pred H
Q 013217 398 T 398 (447)
Q Consensus 398 ~ 398 (447)
.
T Consensus 391 ~ 391 (405)
T PRK09148 391 A 391 (405)
T ss_pred H
Confidence 4
No 142
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.1e-21 Score=197.60 Aligned_cols=345 Identities=17% Similarity=0.132 Sum_probs=211.9
Q ss_pred cCeeEecCCCCCCHHHHHHHhhhhhc----cCCC--CCCCCcccCchhHHHHHHHHHHHHHHHHcC----CCCCccceee
Q 013217 21 KSLELIASENFTSRAVMEAVGSCLTN----KYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 90 (447)
Q Consensus 21 ~~i~l~~~~n~~~~~v~~a~~~~~~~----~~~~--g~~~~~~~~g~~~~~~le~~~~~~~~~~~g----~~~~~~~~~v 90 (447)
..|+|-.+||..+..+++.......+ .+.. -.....+|+.......+.+.+.+++.+.+| ++++ +|
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~I 114 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KL 114 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----He
Confidence 45899999998776555544332211 0000 000111122222234455555567776666 3454 45
Q ss_pred ecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccc-cccceeEEEecccCC-CCCCCCHHHHHHHhhh
Q 013217 91 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 167 (447)
Q Consensus 91 ~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~ 167 (447)
.+|+|+ +++..++.++++|||.|++.+|.|+++.. .+. ..|. ++++++++. +++.+|++++++++++
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGV--EIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCc--EEEEEecCCccCCcCCHHHHHHHHHH
Confidence 568998 88999999999999999999998876532 122 2343 666666653 4567899999988764
Q ss_pred -----hCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCC-------------Ccc
Q 013217 168 -----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF-------------KYC 223 (447)
Q Consensus 168 -----~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~-------------~~~ 223 (447)
.++|+|+++.|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+. ..+.+ ..-
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y-~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~ 263 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIY-SGTVFDSPGFVSVMEVLKDRKLENTDVSNR 263 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccc-cccccCCCCcccHHHHhhhcccccCCCCCc
Confidence 278998888888886 444 567888899999999999995 44333221 11100 012
Q ss_pred cEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc--ChhHHHHHHHHHH
Q 013217 224 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQNKVVS 299 (447)
Q Consensus 224 Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~--~~~~~~~~~~~~~ 299 (447)
-+++.|++|.+ +|.|.|+++++++ .+.+.+.... .. +..+.....+++.+++.-. ...+++..+++.+
T Consensus 264 vi~l~S~SK~~~l~GlRiG~li~~~~-----~l~~~~~~~~-~~--~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~ 335 (468)
T PLN02450 264 VHIVYSLSKDLGLPGFRVGAIYSNDE-----MVVSAATKMS-SF--GLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQ 335 (468)
T ss_pred EEEEEeccccCCCCCccEEEEEECCH-----HHHHHHHHHh-hc--CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 37789999986 6889999999863 3444444332 11 1123333333333333210 0123556778888
Q ss_pred HHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC----CCC-HHHH-HHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCc
Q 013217 300 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPM----GID-GARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 373 (447)
Q Consensus 300 ~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~----~~~-~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~ 373 (447)
+++.+.+.|.+.|+++..+ ..+.++|++++.. ... ..++ .+.++++||.+.++...+ ...++++|+++..
T Consensus 336 rr~~l~~~L~~~gi~~~~~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~---~~~~g~~Rl~f~~ 411 (468)
T PLN02450 336 RQKKLVSGLEAAGIKCLKS-NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCH---CTEPGWFRVCFAN 411 (468)
T ss_pred HHHHHHHHHHHcCCcccCC-CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccC---CCCCCEEEEEecC
Confidence 8888999999888876543 3466778887531 111 1223 334567899996542211 1235689999764
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHH
Q 013217 374 MTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 374 ~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
. + ++++++..+.|++++..
T Consensus 412 ~-~----~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 412 M-S----EETLDLAMKRLKSFVES 430 (468)
T ss_pred C-C----HHHHHHHHHHHHHHHHh
Confidence 2 2 78888888888888764
No 143
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.91 E-value=4.8e-21 Score=190.55 Aligned_cols=352 Identities=16% Similarity=0.103 Sum_probs=212.9
Q ss_pred HHHHHHHHHHH---hhcCeeEecCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHH
Q 013217 8 VCEIITKEKER---QFKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 78 (447)
Q Consensus 8 ~~~~~~~e~~~---~~~~i~l~~~~n------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~ 78 (447)
+.+++....+. .++.++|..++. ..++.+++++...+......+|... .| ..++.+...+++.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g---~~~lr~aia~~~~~~ 89 (401)
T TIGR01264 16 IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPT---VG---ALSAREAIASYYHNP 89 (401)
T ss_pred HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCC---CC---CHHHHHHHHHHHhhc
Confidence 66666543332 245588876554 3578899998876654322233221 11 233443333333321
Q ss_pred cC--CCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CC
Q 013217 79 FN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TG 154 (447)
Q Consensus 79 ~g--~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~ 154 (447)
+ ++++ +|.+++|+ +++..++.+++++||+|++.+|.|..+.. .+...|. ++++++++.+ ++
T Consensus 90 -~~~~~~~----~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~--------~~~~~g~--~v~~~~~~~~~~~ 154 (401)
T TIGR01264 90 -DGPIEAD----DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYET--------LAESMGI--EVKLYNLLPDKSW 154 (401)
T ss_pred -CCCCCHH----HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHH--------HHHHcCC--EEEEeecCCccCC
Confidence 2 3444 34457776 89999999999999999999987754421 2334454 5555555433 56
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----c-cc
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----Y-CD 224 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----~-~D 224 (447)
.+|++++++.+++ ++++|+++.++||+ .. ++++|.++|+++|+++++|+++ ..+.+.+....++. . .-
T Consensus 155 ~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~v 232 (401)
T TIGR01264 155 EIDLKQLESLIDE-KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIY-GDMVFSGATFEPLASLSSTVPI 232 (401)
T ss_pred CCCHHHHHHHhcc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhh-hhhccCCcccccHHHcCCCCcE
Confidence 8999999998876 78999998888886 43 4788999999999999999995 45544331111111 1 13
Q ss_pred EEEeCCCcc--cCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHH
Q 013217 225 VVTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 302 (447)
Q Consensus 225 i~~~s~~K~--l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~ 302 (447)
+++.|++|+ ++|.|.||+++++......++.+.+.....+. . +++.....++..++.......+++..+++.++++
T Consensus 233 i~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~ 310 (401)
T TIGR01264 233 LSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRI-L-GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAM 310 (401)
T ss_pred EEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhcc-C-CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 778999997 47888899998752100012333333322111 1 2233333334444543112334667778888888
Q ss_pred HHHHHHHHC-CcEeeeCCCCCeeEEecCCC----CCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCcccc
Q 013217 303 ALASRLVEL-GYKLVSGGSDNHLVLVDLRP----MGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 376 (447)
Q Consensus 303 ~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~ 376 (447)
.+.+.|.+. |+.+..+ ....++|+++.. ...+..++.+.| +++||.+..+ .... .++++|+++.. .
T Consensus 311 ~l~~~L~~~~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg----~~f~-~~~~iRis~~~--~ 382 (401)
T TIGR01264 311 LCYGALAAVPGLRPVMP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPG----SCFE-YPGFFRVVLTV--P 382 (401)
T ss_pred HHHHHHHhCCCCcccCC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCc----hhcC-CCCeEEEEEcC--C
Confidence 999999885 6654333 346677888642 112455665554 6899999543 2211 24689999752 2
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 013217 377 RGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 377 ~g~~~~di~~l~~~i~~~l~ 396 (447)
+++++...+.|.+.++
T Consensus 383 ----~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 383 ----VVMMEEACSRIQEFCE 398 (401)
T ss_pred ----HHHHHHHHHHHHHHHh
Confidence 6777777777766554
No 144
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=1e-21 Score=198.74 Aligned_cols=343 Identities=14% Similarity=0.088 Sum_probs=209.7
Q ss_pred cCeeEecCCCCCCH-HHHHHHhhhhhc----c-CCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC----CCCCccceee
Q 013217 21 KSLELIASENFTSR-AVMEAVGSCLTN----K-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 90 (447)
Q Consensus 21 ~~i~l~~~~n~~~~-~v~~a~~~~~~~----~-~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g----~~~~~~~~~v 90 (447)
..|+|-.+||...- .+.+.+.+.... . -...|+....|+.......+.+.+.+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 35899999997632 223333322110 0 001233322333333345566666677877777 5665 34
Q ss_pred ecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccc-cccceeEEEecccCC-CCCCCCHHHHHHHhhh
Q 013217 91 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 167 (447)
Q Consensus 91 ~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~ 167 (447)
.+|+|+ +|+..++.++++|||.|++.+|.|+++.. .+. ..|. ++++++++. +++.+|++++++++..
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G~--~vv~v~~~~~~~~~~~~~~le~a~~~ 192 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTGV--EIIPVPCSSSDNFKLTVDAADWAYKK 192 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCCC--EEEEEeCCCCccCcCCHHHHHHHHHH
Confidence 458887 89999999999999999999998887632 122 2343 566666653 3568999999865421
Q ss_pred -----hCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC-------C--c--cc--
Q 013217 168 -----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------K--Y--CD-- 224 (447)
Q Consensus 168 -----~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~-------~--~--~D-- 224 (447)
.++|+|+++.|+||+ ..+ +++|.++|+++|+++|+|+++ ..+++.+....++ + . .+
T Consensus 193 a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY-~~~~f~~~~~~si~~l~~~~~~~~~~~~~v 271 (496)
T PLN02376 193 AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY-AATVFAGGDFVSVAEVVNDVDISEVNVDLI 271 (496)
T ss_pred HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc-cccccCCCCcccHHHhhccccccccCCCeE
Confidence 368988888888886 555 567888999999999999996 4444332111110 0 0 12
Q ss_pred EEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-H----HHHHHH
Q 013217 225 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-K----VYQNKV 297 (447)
Q Consensus 225 i~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~----~~~~~~ 297 (447)
+++.|++|.| +|.|.|++++.++ .+.+.+......+ ..+.....+++..+. ...+ + +..+++
T Consensus 272 ~vv~S~SK~~glpGlRvG~li~~~~-----~l~~~~~~~~~~~---~vs~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l 340 (496)
T PLN02376 272 HIVYSLSKDMGLPGFRVGIVYSFND-----SVVSCARKMSSFG---LVSSQTQLMLASMLS---DDQFVDNFLMESSRRL 340 (496)
T ss_pred EEEEeccccCCCCcceEEEEEECCH-----HHHHHHHHHhhcC---CCCHHHHHHHHHHhC---ChhHHHHHHHHHHHHH
Confidence 4578999986 6888999999653 5555443322111 122222223332332 2223 2 335666
Q ss_pred HHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCC------CHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEe
Q 013217 298 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGI------DGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIG 370 (447)
Q Consensus 298 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig 370 (447)
.++.+.+.+.|.+.|+++..+ ....++|++++.... +..++.+.| ++.||.+.++...+ ...++++|++
T Consensus 341 ~~r~~~l~~~L~~~gi~~~~~-~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~---~~~~g~~Ri~ 416 (496)
T PLN02376 341 GIRHKVFTTGIKKADIACLTS-NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFR---CTEPGWFRIC 416 (496)
T ss_pred HHHHHHHHHHHHHCCCcccCC-CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccC---CCCCCEEEEE
Confidence 777788888898888876553 345778999854211 113444544 56799996543221 1135689999
Q ss_pred cCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 371 SPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 371 ~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+.. +.++.++...+.|.+++...
T Consensus 417 fa~-----~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 417 FAN-----MDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred eeC-----CCHHHHHHHHHHHHHHHHHh
Confidence 753 23678888888888877644
No 145
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.90 E-value=4.5e-21 Score=190.45 Aligned_cols=333 Identities=14% Similarity=0.102 Sum_probs=212.1
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC---CCccceeeecCC
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD---ENKWGVNVQPLS 94 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~---~~~~~~~v~~~s 94 (447)
+..|+|..+++. +++.+.+++...+.. ...|+.. .| ...+.+...+++.+.+|.+ +++ +|.+|+
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~~Y~~~---~G---~~~lr~~ia~~~~~~~g~~~~~~~~---~i~it~ 97 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDG--LASYPTT---AG---LPALREAIAAWLERRYGLPALDPAT---QVLPVN 97 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhh--hcCCCCC---CC---CHHHHHHHHHHHHHHhCCCcCCccc---eEEECC
Confidence 567888777774 477888888766542 1234332 11 2345445556777777843 321 455688
Q ss_pred cH-HHHHHHHHHhcCC---CCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhC
Q 013217 95 GS-PANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR 169 (447)
Q Consensus 95 Gs-~a~~~~~~al~~p---gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~ 169 (447)
|+ +++..++.++++| ||+|++.+|.|.++.. .+...|. ++++++++++ ++.+|++++++.+.+ +
T Consensus 98 G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~vp~~~~~~~~~d~~~l~~~~~~-~ 166 (396)
T PRK09147 98 GSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG--------AALLAGA--EPYFLNCDPANNFAPDFDAVPAEVWA-R 166 (396)
T ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH--------HHHhcCC--EEEEeccCccccCccCHHHHHHHHhh-c
Confidence 87 8999999999999 9999999988765421 2334454 5666666643 467999999988766 8
Q ss_pred CcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCC--C------C----cccEEEeCCCc
Q 013217 170 PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F------K----YCDVVTTTTHK 232 (447)
Q Consensus 170 ~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~--~------~----~~Di~~~s~~K 232 (447)
+|+|+++.++||+ .. .+++|.++|+++++++|+|+++ ..+.+.+..+.+ + . ..-+++.|++|
T Consensus 167 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 245 (396)
T PRK09147 167 TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECY-SEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSK 245 (396)
T ss_pred cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccc-cccccCCCCCCchhhhhccccCccccccEEEEecccc
Confidence 9999998889986 44 4678888899999999999996 333333211100 0 0 12288899999
Q ss_pred c--cCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 233 S--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 233 ~--l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
. ++|.|.||+++++ ++.+.+......... +++.....+...++. .....++..+.+.++++.+.+.|.+
T Consensus 246 ~~~~~GlRiG~~~~~~------~l~~~~~~~~~~~~~-~~~~~~q~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~ 316 (396)
T PRK09147 246 RSNVPGLRSGFVAGDA------ALLKKFLLYRTYHGC-AMPPAVQAASIAAWN--DEAHVRENRALYREKFDAVTPILAP 316 (396)
T ss_pred ccCCccceeeeecCCH------HHHHHHHHHhhhccc-CCCHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5788999999887 677766543221111 223222333222332 1223456677778888888888876
Q ss_pred CCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCC---CCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 311 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 311 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
. +.+..+ ....++|++++ .+..++.+.| +++||.+..+...+.. .....+++||++.. + ++++++
T Consensus 317 ~-~~~~~p-~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~----~~~l~~ 385 (396)
T PRK09147 317 V-LDVQLP-DAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--P----LAECVE 385 (396)
T ss_pred h-cCCCCC-CeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--C----HHHHHH
Confidence 3 443322 34677888876 2456665554 6789999654322211 11224689998652 2 677777
Q ss_pred HHHHHHHHH
Q 013217 387 IADFIHEGV 395 (447)
Q Consensus 387 l~~~i~~~l 395 (447)
..+.|.+.+
T Consensus 386 ~l~rl~~~~ 394 (396)
T PRK09147 386 AAERIVDFC 394 (396)
T ss_pred HHHHHHHHh
Confidence 777776655
No 146
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.90 E-value=5.4e-21 Score=190.32 Aligned_cols=340 Identities=14% Similarity=0.073 Sum_probs=210.9
Q ss_pred hhcCeeEecCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceee
Q 013217 19 QFKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 90 (447)
Q Consensus 19 ~~~~i~l~~~~n------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v 90 (447)
.++.|+|..++. .+|+.+++++...+......+|+.. .| ...+.+...+++.+.+|. +++ +|
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~---~G---~~~lr~aia~~~~~~~g~~~~~~----~I 100 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPT---GG---ILPARRAIADYLSNDLPYQLSPD----DV 100 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCC---CC---CHHHHHHHHHHHHhhcCCCCCHh----hE
Confidence 445677765554 4678888988876654222234221 11 223444444566665554 454 44
Q ss_pred ecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhh
Q 013217 91 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF 168 (447)
Q Consensus 91 ~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~ 168 (447)
.+|+|+ +++..++.++++|||+|++.+|.|+++.. .+...|. +++.+++++ +++.+|++++++++++
T Consensus 101 ~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~- 169 (409)
T PLN00143 101 YLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVET--------YAIFHHL--EIRHFDLLPEKGWEVDLDAVEAIADE- 169 (409)
T ss_pred EEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH--------HHHHcCC--EEEEEeccCCCCCcCCHHHHHHhccc-
Confidence 558887 89999999999999999999998766531 2234454 444555532 4567999999998876
Q ss_pred CCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC---c--ccEEEeCCCccc--CC
Q 013217 169 RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---Y--CDVVTTTTHKSL--RG 236 (447)
Q Consensus 169 ~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~---~--~Di~~~s~~K~l--~G 236 (447)
++++++++.|+||+ ..+ +++|.++|+++|+++++|+++ ..+.+.+....++. . .-+++.|++|.+ +|
T Consensus 170 ~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG 248 (409)
T PLN00143 170 NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVY-GHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPG 248 (409)
T ss_pred CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccc-cccccCCCCCcchhhhcccCcEEEEccchhhcCCCc
Confidence 78888888788886 555 678888899999999999995 55554332111211 1 237889999984 78
Q ss_pred CCCceEEeecCCcchhhH------HHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 237 PRGGMIFFKKDPVLGVEL------ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 237 p~gG~i~~~~~~~~~~~~------~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
.|.||++++++. .+ .+.+.....+.. .. +.....++..++.......+++..+++.++.+.+.+.|.+
T Consensus 249 lRvG~~v~~~p~----~~~~~~~~~~~~~~~~~~~~-~~-~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 322 (409)
T PLN00143 249 WGLGWLVTCDPS----GLLQICEIADSIKKALNPAP-FP-PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE 322 (409)
T ss_pred cceEEEEeeCch----hhhhhHHHHHHHHHHHhccC-CC-CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 889999984310 22 222322222211 11 2223333333443211124577788888888888888877
Q ss_pred CCcEe-eeCCCCCeeEEecCCCC---CC-CHHH-HHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHH
Q 013217 311 LGYKL-VSGGSDNHLVLVDLRPM---GI-DGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 384 (447)
Q Consensus 311 ~g~~~-~~~~~~~~~~~v~~~~~---~~-~~~~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di 384 (447)
.+... ...+....++|++++.. ++ +..+ +.+++.++||.+..+ .... ..+++||++. ++ ++++
T Consensus 323 ~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg----~~f~-~~~~iRi~~~--~~----~~~l 391 (409)
T PLN00143 323 IPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPG----VTVG-LKNWLRITFA--VE----QSSL 391 (409)
T ss_pred CCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCc----cccC-CCCeEEEEEc--CC----HHHH
Confidence 54322 22233467788888531 22 3434 456668899999654 3211 2468999975 23 6788
Q ss_pred HHHHHHHHHHHHH
Q 013217 385 VAIADFIHEGVEI 397 (447)
Q Consensus 385 ~~l~~~i~~~l~~ 397 (447)
++..+.|.++++.
T Consensus 392 ~~al~rl~~~l~~ 404 (409)
T PLN00143 392 EDGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888777653
No 147
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.90 E-value=2.6e-21 Score=193.00 Aligned_cols=343 Identities=15% Similarity=0.127 Sum_probs=212.5
Q ss_pred hhcCeeEecCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC--------CCCC
Q 013217 19 QFKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--------LDEN 84 (447)
Q Consensus 19 ~~~~i~l~~~~n------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g--------~~~~ 84 (447)
.+..|+|..+.. +.++.+.+++...+......+|+.. .....+.+.+.+++.+.++ ++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~------~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~ 105 (412)
T PTZ00433 32 PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPT------VGSPEAREAVATYWRNSFVHKESLKSTIKKD 105 (412)
T ss_pred CCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCC------CCcHHHHHHHHHHHHhhccccccccCCCChh
Confidence 345577765543 3578889998876653212234332 2233455444455655443 4444
Q ss_pred ccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHH
Q 013217 85 KWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLE 162 (447)
Q Consensus 85 ~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~ 162 (447)
+|.+|+|+ +++..++.++++|||+|++.+|.|..+.. .+...|. +++.+++++ +++.+|+++++
T Consensus 106 ----~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~ 171 (412)
T PTZ00433 106 ----NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET--------VCKAYGI--EMRFYNCRPEKDWEADLDEIR 171 (412)
T ss_pred ----hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCC--EEEEEecCccccCcCCHHHHH
Confidence 44558887 89999999999999999999998766532 2334454 444555543 35689999999
Q ss_pred HHhhhhCCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---C--cccEEEeCCCc
Q 013217 163 KTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHK 232 (447)
Q Consensus 163 ~~~~~~~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~--~~Di~~~s~~K 232 (447)
+++++ ++++|+++.++||+ .. ++++|.++|+++|+++++|+++ ..+.+.+....++ . ..-+++.|++|
T Consensus 172 ~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK 249 (412)
T PTZ00433 172 RLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIY-AGMVFNGATFTSVADFDTTVPRVILGGTAK 249 (412)
T ss_pred HHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccc-cccccCCCCccchhhccCCCceEEEccchh
Confidence 98877 89999998888886 33 4678899999999999999996 4555433111111 1 12377899999
Q ss_pred cc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 233 SL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 233 ~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
++ +|.|.||+++.++.....++.+.+....... .+. +.....++..++.......+++..+++.++++.+.+.|.+
T Consensus 250 ~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~-~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 327 (412)
T PTZ00433 250 NLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGP-CSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE 327 (412)
T ss_pred hcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhcc-CCC-ChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76 6888899997321000013555554432211 222 3333333333443211123466677888888889999987
Q ss_pred -CCcEeeeCCCCCeeEEecCCCC---CC-CHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHH
Q 013217 311 -LGYKLVSGGSDNHLVLVDLRPM---GI-DGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 384 (447)
Q Consensus 311 -~g~~~~~~~~~~~~~~v~~~~~---~~-~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di 384 (447)
.|+.+..+ ....++|+.+... +. +..++.+.| +++||.+..+ .... .++++|+++.. .++++
T Consensus 328 ~~~~~~~~p-~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg----~~f~-~~~~iRis~~~------~~e~l 395 (412)
T PTZ00433 328 CIGLSPTMP-RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPG----EIFH-MPGFTRLTISR------PVEVL 395 (412)
T ss_pred CCCCcccCC-CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCc----cccC-CCCeEEEEecC------CHHHH
Confidence 46665433 3456677776431 11 445666665 5689999543 3211 24689999742 26788
Q ss_pred HHHHHHHHHHHHH
Q 013217 385 VAIADFIHEGVEI 397 (447)
Q Consensus 385 ~~l~~~i~~~l~~ 397 (447)
++..+.|.+++..
T Consensus 396 ~~al~~l~~~~~~ 408 (412)
T PTZ00433 396 REAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888777764
No 148
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.90 E-value=7.1e-22 Score=199.27 Aligned_cols=290 Identities=16% Similarity=0.146 Sum_probs=192.7
Q ss_pred HHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHh-cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 71 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 71 ~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al-~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.++++++++|++.+ ++..++|+ +++.+++.++ .++||+|+++++.|+++..... ......| .+++.++
T Consensus 117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~G--~~~~~v~ 186 (447)
T PRK00451 117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK----TYLKGQG--IEVVEVP 186 (447)
T ss_pred HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH----HHHHhCC--cEEEEec
Confidence 34688999999875 44446665 7777788887 4899999999988876542110 0001134 3555666
Q ss_pred cCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEE--ehhhhccccccccCCCCCC-ccc
Q 013217 149 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMM--DMAHISGLVAASVVADPFK-YCD 224 (447)
Q Consensus 149 ~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~liv--D~a~~~g~~~~~~~~~~~~-~~D 224 (447)
+++ + .+|++++++++++ +|++|+++.+++.+ ..|+++|+++|+++|+++++ |.. +.|.+. .+-. ++|
T Consensus 187 ~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~-----~~~~~~~D 257 (447)
T PRK00451 187 YED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLK-----PPGEYGAD 257 (447)
T ss_pred CCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCC-----CcccCCCC
Confidence 664 4 8999999999987 89999998765555 77999999999999999998 643 344331 1211 589
Q ss_pred EEEeCCCcc-----cCCCCCceEEeecCCcchhhHHHHhhhc--------------------c---CCCCCCCCcH---H
Q 013217 225 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNA--------------------V---FPGLQGGPHN---H 273 (447)
Q Consensus 225 i~~~s~~K~-----l~Gp~gG~i~~~~~~~~~~~~~~~i~~~--------------------~---~~~~~g~p~~---~ 273 (447)
++++|+||| ++||+.|++++++ ++.+.+... . .....++.+. .
T Consensus 258 ~~~~s~~k~~~~~~~~Gpg~G~l~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGPYLGFFATRK------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQ 331 (447)
T ss_pred EEEECCCcCCCCCCCCCCCchHHHhhH------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccH
Confidence 999999986 6788779999887 454443100 0 0000112121 1
Q ss_pred HH--HHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEE
Q 013217 274 TI--GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 350 (447)
Q Consensus 274 ~~--aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v 350 (447)
.+ .+.+.+++.+...++++..+++.++++++.+.|++. |+++. ++...+.+.+++. .+..++.+.|.++||.+
T Consensus 332 ~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~~---~~~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 332 ALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRLP---KPAEEVNEALLEKGILG 407 (447)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEecC---CCHHHHHHHHHhcCCCC
Confidence 11 222234555556678888999999999999999985 67776 2221122234542 25678999999888875
Q ss_pred ccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 351 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 351 ~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
.....+. .+.....+|++++.++| ++|++++++.|++++
T Consensus 408 ~~~~~~~--~~~~~~~~rvs~~~~~t----~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 408 GYDLGRY--YPELGNHLLVCVTEKRT----KEDIDALVAALGEVL 446 (447)
T ss_pred Ccccccc--cCCcCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 3211111 11123589999998888 999999999998654
No 149
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=2.2e-21 Score=189.80 Aligned_cols=318 Identities=14% Similarity=0.109 Sum_probs=202.7
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
..++|..++|+ +|+.+++++...+.. ...||.. . ...+ ++.++++++++++ +|.+++|+ +
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~--~~~y~~~------~-~~~l----r~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC--AERYPDV------E-YRHL----HQALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh--cccCcCc------c-HHHH----HHHHHHHhCcChh----hEEECCCHHH
Confidence 45888889886 588999998776543 1234321 1 2233 4577788899876 34458887 7
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~klii~~ 176 (447)
++..++.++ .+|| +++.+|.+..+. ..+...|. +++.++++++ ++.+| +++++.+.+ ++|+|+++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~-~~~~~~~~~-~~k~v~l~ 149 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPGFAEYR--------RALQQVGC--EIRRYSLREADGWQLT-DAILEALTP-DLDCLFLC 149 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCCcHHHH--------HHHHHcCC--eEEEEecccccCCCcc-HHHHHhccC-CCCEEEEe
Confidence 877777775 7786 566666554332 12334454 5555556533 34566 455555654 89999998
Q ss_pred CCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccC-CCCCC--cccEEEeCCCccc--CCCCCceEEeec
Q 013217 177 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK 246 (447)
Q Consensus 177 ~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~~~~--~~Di~~~s~~K~l--~Gp~gG~i~~~~ 246 (447)
.++||+ ..+ +++|.++|+++|+++|+|+++ .++...+.. ...+. ...+++.|+||++ +|.|.||++.++
T Consensus 150 ~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 228 (356)
T PRK08056 150 TPNNPTGLLPERQLLQAIAERCKSLNIALILDEAF-IDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD 228 (356)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecch-hccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC
Confidence 888886 556 778899999999999999985 444322210 01111 2468899999986 577889999854
Q ss_pred CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCee
Q 013217 247 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL 324 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 324 (447)
+ ++.+.+.....+. +.+.....+...++ ....+ ++..+++.++++.+.+.|++. |+.+..+ .+.+
T Consensus 229 ~-----~~~~~l~~~~~~~---~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~~~ 295 (356)
T PRK08056 229 D-----AAVARMRRQQMPW---SINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWPG--RANY 295 (356)
T ss_pred H-----HHHHHHHHhCCCC---chhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--CCcE
Confidence 2 5656665432221 22222222222222 22333 455677888888999999874 7766543 3556
Q ss_pred EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 325 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+|+++.. +..++.+.|.++||.+..+... .....++|||++. + +++++++.++|+++++
T Consensus 296 ~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f---~~~~~~~iRis~~---~----~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 296 LFLRCER---PDIDLQRALLTQRILIRSCANY---PGLDSRYYRVAIR---S----AAENERLLAALRNVLT 354 (356)
T ss_pred EEEEcCC---ChHHHHHHHHHCCeEEEECCCC---CCCCCCEEEEEEc---C----HHHHHHHHHHHHHHHc
Confidence 7887653 3567888888899999754221 1122458999964 3 7899999999987654
No 150
>PRK08175 aminotransferase; Validated
Probab=99.90 E-value=1e-20 Score=187.76 Aligned_cols=337 Identities=15% Similarity=0.105 Sum_probs=208.9
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCc
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 95 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sG 95 (447)
+..++|..+... .++.+.+++.+.+.+....+|+. .....++.+.+.+++.+.+|.. +++ ++.+|+|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~~---~i~~t~G 99 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYST------SRGIPRLRRAISRWYQDRYDVDIDPES---EAIVTIG 99 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEccC
Confidence 455676544332 35667777665543321123322 2223455555556776666654 331 3445888
Q ss_pred H-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--CCcE
Q 013217 96 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKL 172 (447)
Q Consensus 96 s-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~kl 172 (447)
+ +++..++.++++|||+|++.+|.|+.+.. .+...|. +++.++++++ ..++++++++++.. ++++
T Consensus 100 ~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~ 167 (395)
T PRK08175 100 SKEGLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGA--QVRSVPLVEG--VDFFNELERAIRESYPKPKM 167 (395)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--eEEEEecccC--CCcHHHHHHHHhhccCCceE
Confidence 8 78888888999999999999998876532 1233454 5555556533 23588888887642 6899
Q ss_pred EEEcCCCCCC--CCCh---HHHHHHHHHhCCEEEEehhhhccccccccCCCC---CC---cccEEEeCCCccc--CCCCC
Q 013217 173 IIAGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRG 239 (447)
Q Consensus 173 ii~~~~~~~~--~~~~---~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~~---~~Di~~~s~~K~l--~Gp~g 239 (447)
|+++.++||+ ..+. ++|.++|+++|+++|+|+++. .+.+.+....+ ++ ...+++.|++|.+ +|.|.
T Consensus 168 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRi 246 (395)
T PRK08175 168 MILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA-DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRI 246 (395)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchH-hhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhh
Confidence 9988777776 5565 788999999999999999963 33433211111 11 1236789999997 57778
Q ss_pred ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCC
Q 013217 240 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 319 (447)
Q Consensus 240 G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 319 (447)
||++.++ ++.+.+.+.......++....+.+ ...++... ....+...+.+.++++.+.+.|++.|+.+..+
T Consensus 247 G~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p- 317 (395)
T PRK08175 247 GFMVGNP------ELVSALARIKSYHDYGTFTPLQVA-AIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMP- 317 (395)
T ss_pred eeeeCCH------HHHHHHHHHHhhcccCCCcHHHHH-HHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-
Confidence 9999877 677766553321112222322222 23344321 22345667777888899999998888765433
Q ss_pred CCCeeEEecCCCC--CCCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPM--GIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 320 ~~~~~~~v~~~~~--~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
....++|++++.. ..+..++... ++++||.+..+...+ +..+.++|+++. .. ++.+++..+.|.+.+.
T Consensus 318 ~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~---~~~~~~lRis~~--~~----~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 318 KASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG---DYGDTHVRFALI--EN----RDRIRQAIRGIKAMFR 388 (395)
T ss_pred CEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC---cCCCCeEEEEeC--CC----HHHHHHHHHHHHHHHH
Confidence 3466778887642 1245667654 567999996542221 122458999874 23 6777777777777665
No 151
>PRK09265 aminotransferase AlaT; Validated
Probab=99.90 E-value=1.1e-20 Score=187.99 Aligned_cols=340 Identities=14% Similarity=0.059 Sum_probs=203.4
Q ss_pred hcCeeEecC-CC----CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHc--CCCCCccceeeec
Q 013217 20 FKSLELIAS-EN----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQP 92 (447)
Q Consensus 20 ~~~i~l~~~-~n----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~--g~~~~~~~~~v~~ 92 (447)
++.++|..+ ++ ..++.+.+++...+.. ..+|+.. .| ...+.+...+++.... +++++ +|.+
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~--~~~Y~~~---~G---~~~lr~~ia~~~~~~~~~~~~~~----~i~~ 100 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPT--AQGYSDS---KG---LFSARKAIMQYYQQKGIPDVDVD----DIYI 100 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCC---CC---cHHHHHHHHHHHhccCCCCCCcc----cEEE
Confidence 456888663 32 1577888887765443 1244432 11 2234322223332211 56665 4455
Q ss_pred CCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCC
Q 013217 93 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRP 170 (447)
Q Consensus 93 ~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~ 170 (447)
++|+ +++..++.++++|||+|++.+|.|..+.. .+...|. +.+.++.+. +++.+|++++++++.+ ++
T Consensus 101 t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~ 169 (404)
T PRK09265 101 GNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA--------AVSLSGG--KPVHYLCDEEAGWFPDLDDIRSKITP-RT 169 (404)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhccc-cc
Confidence 8887 77888889999999999999998875432 2223343 444444543 3567999999998876 89
Q ss_pred cEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC----Cc-ccEEEeCCCccc--CCCC
Q 013217 171 KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KY-CDVVTTTTHKSL--RGPR 238 (447)
Q Consensus 171 klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~----~~-~Di~~~s~~K~l--~Gp~ 238 (447)
++|++++++||+ ..+ +++|.++|+++|+++++|+++ ..+.+.+....++ +. .-+++.|++|++ +|.|
T Consensus 170 ~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 248 (404)
T PRK09265 170 KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIY-DKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR 248 (404)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhh-hhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc
Confidence 998888778776 567 888999999999999999996 3444332111111 11 225678999987 5888
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH---HHHHHHHHHHHHHHHHHC-CcE
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY---QNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~---~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
.|+++...+......+.+.+..... ...+. +.....++..++... ..++++ .+++.++++.+.+.|++. |++
T Consensus 249 iG~~v~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~ 324 (404)
T PRK09265 249 VGWMVLSGPKKHAKGYIEGLDMLAS-MRLCA-NVPAQHAIQTALGGY--QSINELILPGGRLYEQRDRAWELLNAIPGVS 324 (404)
T ss_pred eEEEEEeCchHHHHHHHHHHHHHhc-cccCC-CcHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 8999974220000013333322111 11122 222233333344321 112222 245667778888888774 766
Q ss_pred eeeCCCCCeeEEecCCCCC---C-CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 315 LVSGGSDNHLVLVDLRPMG---I-DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~~~---~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
+..+ ..+.++|+++.... . +.+.+.+.|.++||.+..+...+ ...++++|+++. .+ ++++++..+.
T Consensus 325 ~~~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~---~~~~~~~Ri~~~--~~----~e~l~~~l~r 394 (404)
T PRK09265 325 CVKP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFN---WPEPDHFRIVTL--PR----VDDLEEAIGR 394 (404)
T ss_pred ccCC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhC---CCCCCeEEEEeC--CC----HHHHHHHHHH
Confidence 5443 34667787775321 1 33457788899999995432211 112468999973 33 7889999988
Q ss_pred HHHHHHH
Q 013217 391 IHEGVEI 397 (447)
Q Consensus 391 i~~~l~~ 397 (447)
|.++++.
T Consensus 395 l~~~l~~ 401 (404)
T PRK09265 395 IGRFLSG 401 (404)
T ss_pred HHHHHHH
Confidence 8887763
No 152
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.90 E-value=1.9e-21 Score=193.63 Aligned_cols=348 Identities=15% Similarity=0.170 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHhhcCeeEecCCCCC-------CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHH
Q 013217 6 PEVCEIITKEKERQFKSLELIASENFT-------SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 78 (447)
Q Consensus 6 ~~~~~~~~~e~~~~~~~i~l~~~~n~~-------~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~ 78 (447)
..|..+..++.......+.|..++..+ +..-.+++...+...+ . ..| ....++| +.++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-------~-~~G-~~~~~fe----~~lA~~ 75 (438)
T PRK15407 9 QQILELVREYAELAHAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-------L-TTG-RFNDAFE----KKLAEF 75 (438)
T ss_pred HHHHHHHHHHHHHhcccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-------c-cCC-hhHHHHH----HHHHHH
Confidence 345566666655555556665555533 3343444444443211 0 112 2355676 578889
Q ss_pred cCCCCCccceeeecCCcHHHHHHHHHHh---------cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEeccc
Q 013217 79 FNLDENKWGVNVQPLSGSPANFEVYTAI---------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 149 (447)
Q Consensus 79 ~g~~~~~~~~~v~~~sGs~a~~~~~~al---------~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 149 (447)
+|.+. .+.++||++|+..++.++ ++|||+|+++++.|.+... .+...|. +++.+++
T Consensus 76 ~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~--------~v~~~G~--~pv~vdv 140 (438)
T PRK15407 76 LGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN--------PIIQNGL--VPVFVDV 140 (438)
T ss_pred hCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------HHHHcCC--EEEEEec
Confidence 99874 344688999999888876 4899999999988866532 2334443 6666667
Q ss_pred CCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeC
Q 013217 150 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTT 229 (447)
Q Consensus 150 ~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s 229 (447)
+++++.+|++++++.+++ ++++|+++++ ++...|+++|.++|+++|++||+|++|+.|....+..... ..|+.++|
T Consensus 141 d~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~--~gd~~~fS 216 (438)
T PRK15407 141 ELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGT--FGDIATLS 216 (438)
T ss_pred CCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeec--cCceEEEe
Confidence 766788999999999987 8999888742 3336799999999999999999999999998766532211 24888888
Q ss_pred CC--cccCCCCCceEEeecCCcchhhHHHHhhhccCCCC-----------------------------------CC-CCc
Q 013217 230 TH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-----------------------------------QG-GPH 271 (447)
Q Consensus 230 ~~--K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~-----------------------------------~g-~p~ 271 (447)
+| |.+.+..||+++++++ ++.+++......|. .| ...
T Consensus 217 f~~~k~~~~geGG~l~t~d~-----~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~r 291 (438)
T PRK15407 217 FYPAHHITMGEGGAVFTNDP-----LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLK 291 (438)
T ss_pred CCCCCCccccCceEEEECCH-----HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccC
Confidence 76 6676666899999986 55554432111110 01 001
Q ss_pred HH-HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-C-cEeee--CCC-CC-eeEEecCCC-CCCCHHHHHHHH
Q 013217 272 NH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G-YKLVS--GGS-DN-HLVLVDLRP-MGIDGARVEKIL 343 (447)
Q Consensus 272 ~~-~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~--~~~-~~-~~~~v~~~~-~~~~~~~~~~~L 343 (447)
+. ..||+ ++.++ ..+++..++.+++++.+.+.|.+. + +.+.. .+. .+ +.+.+-+.. .+.+.+++.+.|
T Consensus 292 msel~AAi--g~~qL--~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L 367 (438)
T PRK15407 292 ITDMQAAI--GLAQL--EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYL 367 (438)
T ss_pred ccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHH
Confidence 11 12222 23333 346777888899999999999763 3 22221 111 11 222233322 245678999999
Q ss_pred hhcCeEEccCCC-CCCCCC-CC------CCe--------EE-EecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 344 DMASITLNKNSV-PGDKSA-LV------PGG--------IR-IGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 344 ~~~gI~v~~~~~-p~~~~~-~~------~~~--------iR-ig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.+.||.++..+. |.+..| +. ... -| ++.|.. -+|+++|+++++++|+++++
T Consensus 368 ~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~--~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 368 EENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVY--PGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCC--CCCCHHHHHHHHHHHHHHHh
Confidence 999998765432 222111 00 000 01 223321 25779999999999998775
No 153
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.8e-21 Score=191.49 Aligned_cols=318 Identities=17% Similarity=0.153 Sum_probs=210.5
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
+.++|..++|+ .++.+.+++...... ...|+.. .. ..+ ++.+++++|++++ +|.+++|+ +
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~~------~g-~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAEL--LRLYPDP------QG-RAL----REAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCCC------cH-HHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence 55788888774 578888888764332 1234332 11 133 3567778898765 45568887 7
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
++..++.++++|||+|++..|.|+.+.. .+...|. ++++++.+ .++.+|++++++.+++ +|++|+++.
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 167 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGA--RVERVTVT-PDLGFDLDALCAAVAR-APRMLMFSN 167 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence 8888888999999999999988765421 2234454 55555565 3468999999998877 899999988
Q ss_pred CCCCC--CCChHHHHHHHHH--hCCEEEEehhhhccccccccCCCCC---C--c-ccEEEeCCCccc--CCCCCceEEee
Q 013217 178 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--Y-CDVVTTTTHKSL--RGPRGGMIFFK 245 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~--~g~~livD~a~~~g~~~~~~~~~~~---~--~-~Di~~~s~~K~l--~Gp~gG~i~~~ 245 (447)
++||+ ..+.+++.++++. .++++++|+++ ..+...+..++.+ . + ..+++.|++|.+ +|.|.||+++.
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAY-AEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcH-HHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 88886 6787777777664 37899999995 3333322222211 1 1 237889999986 68888998875
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeE
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 325 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 325 (447)
++ ++.+.+.....+ .+ .+.....+...++.. ...+++..+.+.++++.+.+.|++.|+.+..+ ...++
T Consensus 247 ~~-----~l~~~~~~~~~~--~~-~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p~--~g~fl 314 (371)
T PRK05166 247 DP-----ELVGLLDRVRTP--FN-VNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAPS--RANFL 314 (371)
T ss_pred CH-----HHHHHHHHhccC--CC-CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCCC--cCCEE
Confidence 43 676666543322 12 233332222333331 12346667778888889999999888875432 34556
Q ss_pred EecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 326 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
|+++.. +..++.+.|.++||.+..+ ... ...+++|+++. + .++++++.++|++++
T Consensus 315 ~~~~~~---~~~~l~~~l~~~gi~v~p~----~~~-~~~~~iRi~~~---~----~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 315 FFDARR---PASAVAEALLRQGVIVKPW----KQP-GFETFIRVSIG---S----PEENDHFVAALDKVL 369 (371)
T ss_pred EEeCCC---CHHHHHHHHHHCCeEEecC----CCC-CCCCeEEEEcC---C----HHHHHHHHHHHHHHh
Confidence 887642 4677888888899999653 211 12568999965 2 778999999887754
No 154
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4e-21 Score=191.04 Aligned_cols=336 Identities=13% Similarity=0.047 Sum_probs=214.3
Q ss_pred hcCeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
...++|..+.+.. ++.+.+++.+.+.+. ..+|+.. ....++.+.+.+++++.+|.+.+. .+|.+|+|+
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~------~G~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~ 103 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERG-ETKYTLV------NGTPALRKAIIAKLERRNGLHYAD--NEITVGGGAK 103 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCC------CCCHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHH
Confidence 3457887776653 588888888877532 1223322 222345445556788888875211 245568886
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 175 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~klii~ 175 (447)
+|+..++.++++|||+|++++|.|.++.. .+...+. ..+.++++. +++.+|++++++.+.+ ++++|++
T Consensus 104 ~al~~~~~~~~~~gd~vl~~~p~y~~y~~--------~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l 172 (402)
T PRK06107 104 QAIFLALMATLEAGDEVIIPAPYWVSYPD--------MVLANDG--TPVIVACPEEQGFKLTPEALEAAITP-RTRWLIL 172 (402)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcCHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHhhcCc-CceEEEE
Confidence 89998888999999999999987765421 1222332 344455543 3467999999998876 8898888
Q ss_pred cCCCCCC--CCC---hHHHHHHHHHh-CCEEEEehhhhcccccccc-CCCCC---C---cccEEEeCCCccc--CCCCCc
Q 013217 176 GASAYPR--DFD---YPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPF---K---YCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 176 ~~~~~~~--~~~---~~~i~~ia~~~-g~~livD~a~~~g~~~~~~-~~~~~---~---~~Di~~~s~~K~l--~Gp~gG 240 (447)
+.++||+ ..+ +++|+++|+++ |+++|+|+++. .+.+.+. .+... + ..-++++|++|.+ +|.|.|
T Consensus 173 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (402)
T PRK06107 173 NAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251 (402)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccccee
Confidence 8777776 444 57788889998 99999999863 3333221 11100 1 1247789999997 577789
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 319 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 319 (447)
|++.++ ++.+.+........ .+++....+++..++.. .....++..+.+.++++.+.+.|++. |+.+..+
T Consensus 252 ~~~~~~------~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p- 322 (402)
T PRK06107 252 YAAGPA------DLIAAINKLQSQSS-SCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP- 322 (402)
T ss_pred eeecCH------HHHHHHHHHHHhcc-cCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC-
Confidence 999887 67776665432211 22343333333434432 12234666777888888899999874 7665443
Q ss_pred CCCeeEEecCCC-------CCC---CHHHH-HHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHH
Q 013217 320 SDNHLVLVDLRP-------MGI---DGARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 388 (447)
Q Consensus 320 ~~~~~~~v~~~~-------~~~---~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~ 388 (447)
..+.++|++++. .+. +..++ ...+.++||.+..+ .... ..+++|+++.. + ++++++..
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg----~~Fg-~~~~iRis~~~--~----~e~l~~~l 391 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQG----TAYG-LSPYFRLSIAT--S----LETLEEAC 391 (402)
T ss_pred CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCc----cccC-CCCeEEEEeCC--C----HHHHHHHH
Confidence 456677877631 121 34454 45667899999643 3211 14689999762 3 78888888
Q ss_pred HHHHHHHH
Q 013217 389 DFIHEGVE 396 (447)
Q Consensus 389 ~~i~~~l~ 396 (447)
+.|.+.+.
T Consensus 392 ~~l~~~l~ 399 (402)
T PRK06107 392 ARIERAVA 399 (402)
T ss_pred HHHHHHHH
Confidence 88877765
No 155
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.90 E-value=5.5e-23 Score=195.54 Aligned_cols=222 Identities=18% Similarity=0.147 Sum_probs=158.5
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCc-HHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.+++.++++||++.. .+. ++| +.++.+++.++++|||+|++..+.|.+++. .+...|.....++..
T Consensus 63 ~~~~~~A~~~ga~~~----~~~-~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~~~~~v~~~ 129 (294)
T cd00615 63 EAQELAARAFGAKHT----FFL-VNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGAVPVYLKPE 129 (294)
T ss_pred HHHHHHHHHhCCCCE----EEE-cCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCCEEEEecCc
Confidence 344788999998752 232 455 589999999999999999999988876542 234455533333332
Q ss_pred cCCC---CCCCCHHHHHHHhhh-hCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC--C
Q 013217 149 LDES---TGLVDYDMLEKTAIL-FRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--K 221 (447)
Q Consensus 149 ~~~~---~~~id~~~l~~~~~~-~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~--~ 221 (447)
.+++ .+.+|++++++++++ .++++|+++.+++.+ ..|+++|.++|+++|+++++|++|+.++...+..+... .
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 2221 147999999999875 368898888777665 78999999999999999999999976654333222211 1
Q ss_pred cccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 222 YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 222 ~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
++|+++.|+||+++|+++ |++.++++.. ..+++.........++|+...++++..+++.+... ..++.++..++
T Consensus 210 ~~div~~S~hK~l~g~~~~~~l~~~~~~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~-g~~~~~~~~~~ 284 (294)
T cd00615 210 GADIVVQSTHKTLPALTQGSMIHVKGDLV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMALE-GKELVEELIEL 284 (294)
T ss_pred CCcEEEEchhcccchHhHHHHHHhCCCcC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHH-hHHHHHHHHHH
Confidence 589999999999999886 7777765311 12333333223345789999999999999887533 35678888899
Q ss_pred HHHHHHHHH
Q 013217 301 CRALASRLV 309 (447)
Q Consensus 301 ~~~l~~~L~ 309 (447)
++.+++.|.
T Consensus 285 ~~~~r~~l~ 293 (294)
T cd00615 285 ALYARQEIN 293 (294)
T ss_pred HHHHHHHHh
Confidence 999888875
No 156
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=9.4e-21 Score=187.98 Aligned_cols=331 Identities=17% Similarity=0.134 Sum_probs=208.5
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC----CCccceeeecC
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD----ENKWGVNVQPL 93 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~----~~~~~~~v~~~ 93 (447)
+..++|..+++. +|+.+.+++.+.+.. ...|+.. .....+.+...+++.+.+|.+ +++ +|.+|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~------~G~~~lr~aia~~~~~~~~~~~~~~~~~---~i~it 96 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPTT------KGLPELRQAIARWLERRFDLPTGVDPER---HVLPV 96 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCCC------CCCHHHHHHHHHHHHHhhCCcccCCCCc---eEEEC
Confidence 577888887775 478889998876542 1233332 112345444456676666643 321 45568
Q ss_pred CcH-HHHHHHHHHhcCCCCE--EEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhC
Q 013217 94 SGS-PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR 169 (447)
Q Consensus 94 sGs-~a~~~~~~al~~pgd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~ 169 (447)
+|+ +++..++.++++|||+ |++++|.|.++.. .+...|. +++.++++++ ++.+|++++++++.+ +
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~ 165 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG--------AALLAGA--EPYFLNCTAENGFLPDFDAVPESVWR-R 165 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH--------HHHhcCC--eEEEeeccccCCCCCCHHHHHHHHhh-c
Confidence 887 8999999999999996 8888887765421 2234454 5566666543 357899999998876 8
Q ss_pred CcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhcccccccc--CCCC------CC----cccEEEeCCCc
Q 013217 170 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADP------FK----YCDVVTTTTHK 232 (447)
Q Consensus 170 ~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~--~~~~------~~----~~Di~~~s~~K 232 (447)
+|+|+++.++||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+. .... .. .--+++.|++|
T Consensus 166 ~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 244 (393)
T TIGR03538 166 CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYS-ELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSK 244 (393)
T ss_pred ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchh-hcccCCCCCCcCHHHhcccccccccccEEEEecchh
Confidence 9999988888886 455 6788889999999999999963 3332211 1110 00 01278899999
Q ss_pred c--cCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 233 S--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 233 ~--l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
. ++|.|.|++++++ ++.+++.........+.+...+.++ ..++.. ....++..+.+.++++.+.+.|.+
T Consensus 245 ~~~~~GlRvG~~i~~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~ 315 (393)
T TIGR03538 245 RSNLPGLRSGFVAGDA------EILKAFLRYRTYHGCAMPIPTQLAS-IAAWND--EQHVRENRALYREKFAAVLEILGQ 315 (393)
T ss_pred hcCCcccceEEEecCH------HHHHHHHHHHHhhccCcCHHHHHHH-HHHhcC--hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 4788999999887 6766665433211122222222222 223321 223456667778888888888876
Q ss_pred CCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCC---CCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 311 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 311 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
. +.+.. +....++|++++ .+..++.+.| +++||.+..+...+.. .+...+++||++.. + ++++++
T Consensus 316 ~-~~~~~-p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~----~~~l~~ 384 (393)
T TIGR03538 316 V-LDLEL-PDAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--P----LEECVE 384 (393)
T ss_pred h-CcccC-CCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--C----HHHHHH
Confidence 4 33322 244667888875 2456676665 6789999654321110 11224689999653 3 677777
Q ss_pred HHHHHHH
Q 013217 387 IADFIHE 393 (447)
Q Consensus 387 l~~~i~~ 393 (447)
..+.|.+
T Consensus 385 ~l~~l~~ 391 (393)
T TIGR03538 385 AAERIRS 391 (393)
T ss_pred HHHHHHH
Confidence 7777654
No 157
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.90 E-value=4.5e-21 Score=191.15 Aligned_cols=343 Identities=14% Similarity=0.127 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHH--hhcCeeEecCCCC--CCHHHHHHHhhhhhcc----CCCCCCCCcccCchhHHHHHHHHHHHHHHHH
Q 013217 7 EVCEIITKEKER--QFKSLELIASENF--TSRAVMEAVGSCLTNK----YSEGLPGKRYYGGNEYIDELETLCQKRALAA 78 (447)
Q Consensus 7 ~~~~~~~~e~~~--~~~~i~l~~~~n~--~~~~v~~a~~~~~~~~----~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~ 78 (447)
++.+.+....+. .++.++|..+++. +++.+.+++.+.+... ...+|+ ..+....+.+...+++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~LR~aia~~~~~~ 92 (409)
T PRK07590 19 EIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG------PEQGYDFLREKIAENDYQA 92 (409)
T ss_pred HHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC------CCCCCHHHHHHHHHHHHHh
Confidence 455555544333 2456888888875 4678888887766531 111332 1122234544444555555
Q ss_pred cC--CCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccce---------eEEEe
Q 013217 79 FN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------FESMP 146 (447)
Q Consensus 79 ~g--~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~~~ 146 (447)
.| ++++ +|.+|+|+ +++.. +..+++|||+|++.+|.|.++.. .+...|.. .++++
T Consensus 93 ~g~~~~~~----~I~it~Ga~~al~~-l~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~ 159 (409)
T PRK07590 93 RGCDISAD----EIFISDGAKCDTGN-ILDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVY 159 (409)
T ss_pred cCCcCChh----hEEECCCHHHHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeE
Confidence 55 4454 45569998 67665 45677999999999998876542 12233331 12556
Q ss_pred cccCCC-CCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC
Q 013217 147 YRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 220 (447)
Q Consensus 147 ~~~~~~-~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~ 220 (447)
++++++ ++.+|.+ ..++|+|+++.|+||+ ..+ +++|.++|+++|+++|+|+++ ..+...+..+.++
T Consensus 160 v~~~~~~~~~~d~~-------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~ 231 (409)
T PRK07590 160 LPCTAENNFVPELP-------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY-EAFISDPSLPHSI 231 (409)
T ss_pred eecccccCCcccCc-------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc-hhhccCCCCCcch
Confidence 666533 3444432 1389999988888886 444 567888899999999999996 3444332211112
Q ss_pred ---Cc---ccEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHh------------hhccCCCCCCCCcHHHHHHHHH
Q 013217 221 ---KY---CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAI------------NNAVFPGLQGGPHNHTIGGLAV 280 (447)
Q Consensus 221 ---~~---~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i------------~~~~~~~~~g~p~~~~~aal~~ 280 (447)
+. .-+++.|++|++ +|.|.|++++++ ++.+.+ ........ .+++.....++..
T Consensus 232 ~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~------~li~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~ 304 (409)
T PRK07590 232 YEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPK------ELKGKTSDGEGVSLNSLWNRRQSTKF-NGVSYIVQRAAEA 304 (409)
T ss_pred hhCCCcccceEEEecCccccCCcCceeEEEEcCH------HHhhhccccchhhhHHHHHHHHhhcc-cCcCHHHHHHHHH
Confidence 11 236789999986 688889999987 555421 11111111 1223333333333
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCC
Q 013217 281 CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK 359 (447)
Q Consensus 281 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~ 359 (447)
++..-.....++..+.+.++++.+.+.|++.|+.+..+ ..++++|++++. +++..++...| +++||.+..+...+
T Consensus 305 ~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~-- 380 (409)
T PRK07590 305 VYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGG-VNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGTPGSGFG-- 380 (409)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEeChhHhC--
Confidence 44321112345667778888899999999888776543 346678888864 35556666554 57899986442211
Q ss_pred CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 360 SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 360 ~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
....+++||+. ..+ ++++++..+.|.++
T Consensus 381 -~~~~~~iRi~~--~~~----~~~l~~~l~rl~~~ 408 (409)
T PRK07590 381 -PSGEGYFRLSA--FGS----RENVLEAMERIKKA 408 (409)
T ss_pred -CCCCCEEEEEc--cCC----HHHHHHHHHHHHhh
Confidence 11245899984 233 78888888877654
No 158
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.90 E-value=1.6e-21 Score=189.21 Aligned_cols=315 Identities=18% Similarity=0.211 Sum_probs=209.4
Q ss_pred CCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccc
Q 013217 54 GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKR 133 (447)
Q Consensus 54 ~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~ 133 (447)
|...|+|.+....+| +.+++++|.++ .|.++||+.|+..++...++|||+| +++.|.... ..
T Consensus 63 GDe~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt-------~a 124 (450)
T TIGR02618 63 GDEAYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTT-------RY 124 (450)
T ss_pred cchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHH-------HH
Confidence 333467777788898 57889999986 3556899999776666678999988 333331111 01
Q ss_pred ccccccceeEEEecccC---------CCCCCCCHHHHHHHhhhh---CCcEEEEcCCCC-C-C-C---CChHHHHHHHHH
Q 013217 134 RVSGTSIYFESMPYRLD---------ESTGLVDYDMLEKTAILF---RPKLIIAGASAY-P-R-D---FDYPRMRQIADA 195 (447)
Q Consensus 134 ~~~~~g~~~~~~~~~~~---------~~~~~id~~~l~~~~~~~---~~klii~~~~~~-~-~-~---~~~~~i~~ia~~ 195 (447)
.+...|. .++.+..+ +.++.+|+++|++++++. ++++|.+..++| . + + .+++++.++|++
T Consensus 125 hIe~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~ 202 (450)
T TIGR02618 125 HQEKNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEA 202 (450)
T ss_pred HHHhCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHH
Confidence 1234443 33333222 457899999999999763 233555542332 2 3 4 467999999999
Q ss_pred hCCEEEEehhhhccccc------cccCCCCC--------CcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhc
Q 013217 196 VGALLMMDMAHISGLVA------ASVVADPF--------KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 261 (447)
Q Consensus 196 ~g~~livD~a~~~g~~~------~~~~~~~~--------~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~ 261 (447)
||++|+.|+||..|--. .+....++ .++|.+++|++|...+|.||+|+++++ ++.++++..
T Consensus 203 ~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-----~l~~k~r~~ 277 (450)
T TIGR02618 203 HGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-----EMFQSAKEL 277 (450)
T ss_pred cCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-----HHHHHHHHH
Confidence 99999999999885311 12222222 379999999999999999999998886 788877665
Q ss_pred --cCCCC--CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC--CC-
Q 013217 262 --VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM--GI- 334 (447)
Q Consensus 262 --~~~~~--~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~--~~- 334 (447)
.+.|+ .|+..-..+.|++.++++.... .+.++...++++|.+.|.+.|++++.+ ...|.+++|.... .+
T Consensus 278 ~~~~eG~~tyGgla~r~~~ala~gL~e~~~~---~y~~~r~~~a~~La~~L~~~Gvpv~~p-~ggh~V~vda~~~lph~~ 353 (450)
T TIGR02618 278 VVVFEGMPSYGGLAGRDMEAMAIGIREAVDY---EYIEHRVKQVRYLGDKLKAAGVPIVEP-VGGHAVFLDARRFLPHIP 353 (450)
T ss_pred hhhcCCccccCchhhhhHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHCCCcccCC-CCcceEEEEhHHhCCCCC
Confidence 33443 3443445678888888886543 557777889999999999999998654 5678888886431 22
Q ss_pred ----CHHHHHHHH-hhcCeEEc-cCCC-----CCCCCCCCC--CeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 335 ----DGARVEKIL-DMASITLN-KNSV-----PGDKSALVP--GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 335 ----~~~~~~~~L-~~~gI~v~-~~~~-----p~~~~~~~~--~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
.++.+.-.| .+.||... .+++ |.......+ .-+|+..|. |-.+.+.|+++++.+..+.++...
T Consensus 354 ~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 354 QDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPR---RVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred hhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccc---ccccHhHHHHHHHHHHHHHhhHhh
Confidence 334444444 56677532 2222 111111111 358987653 445689999999999998887643
No 159
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.89 E-value=7e-21 Score=175.59 Aligned_cols=336 Identities=18% Similarity=0.224 Sum_probs=240.1
Q ss_pred cCeeEecCCCCC----CHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc
Q 013217 21 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG 95 (447)
..+..+.|..|+ .|.|++||...+. +|..|-.|.|.-.| +.+.-.+| ..++++.+-+.+ +.++|.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~-~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~aA-----LlFsSC 240 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLD-RHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEAA-----LLFSSC 240 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHH-HcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcce-----eeeeee
Confidence 447778888886 5999999998886 46667777775544 45556777 578899887763 334777
Q ss_pred HHHHHHHHHHh--cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh---CC
Q 013217 96 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RP 170 (447)
Q Consensus 96 s~a~~~~~~al--~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~---~~ 170 (447)
.-||.+.+..| .-||.+|......|.+.+. .++-++. -+.+ +. .-|+++|+++++.. .|
T Consensus 241 fVANDstLftLak~lpgcei~SD~gNHASMI~--------GIrns~v-~K~I-Fr------HND~~hL~~lL~~~~~svP 304 (570)
T KOG1360|consen 241 FVANDSTLFTLAKKLPGCEIFSDEGNHASMIQ--------GIRNSRV-PKHI-FR------HNDLDHLEQLLQSSPKSVP 304 (570)
T ss_pred eeccchHHHHHHHHCCCcEEeccccchHHHHH--------HhhhcCC-ccee-ec------cCCHHHHHHHHHhCCCCCC
Confidence 78888888877 4599999988766654431 1222221 1111 11 35899999988653 47
Q ss_pred cEEEEc--CCCCCCCCChHHHHHHHHHhCCEEEEehhhhcccccc---cc--CCCCCCcccEEEeCCCcccCCCCCceEE
Q 013217 171 KLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIF 243 (447)
Q Consensus 171 klii~~--~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~---~~--~~~~~~~~Di~~~s~~K~l~Gp~gG~i~ 243 (447)
|+|.+. .|..+.+.|+++|++++++||++.++|++|+.|+... |+ .+--+...||++++..|.| |--||+|.
T Consensus 305 KivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIA 383 (570)
T KOG1360|consen 305 KIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIA 383 (570)
T ss_pred ceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceeh
Confidence 888886 3333348899999999999999999999999998754 11 1112235899999999987 56689998
Q ss_pred eecCCcchhhHHHHhhhccCCCC--CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCC
Q 013217 244 FKKDPVLGVELESAINNAVFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 321 (447)
Q Consensus 244 ~~~~~~~~~~~~~~i~~~~~~~~--~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 321 (447)
... .+.+.++... +|+ ..+..+..+++...|.+.+..++...++++..+|.+++++.|.+.|++++. .+
T Consensus 384 at~------~LvDmiRSyA-aGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~--~p 454 (570)
T KOG1360|consen 384 ATR------KLVDMIRSYA-AGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP--NP 454 (570)
T ss_pred hhh------hHHHHHHHhc-CceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC--CC
Confidence 887 6888777643 332 233344556666668887776666777888999999999999999999987 45
Q ss_pred CeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+|++.+.+.+..+..+....++.++||.|...-.|.. +.....+||.....+| ++-|+.+.+.+.++.+..
T Consensus 455 SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV--~rG~E~LRiaPTP~HT----~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 455 SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTV--ARGTERLRIAPTPHHT----PQMMNILVNALLDVWNEV 525 (570)
T ss_pred cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcc--cccceeeecCCCCCCC----HHHHHHHHHHHHHHHHHc
Confidence 8888777765444333344466789999987444432 3345689998877777 999999999999888764
No 160
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.4e-20 Score=185.45 Aligned_cols=321 Identities=14% Similarity=0.119 Sum_probs=205.7
Q ss_pred CeeEecCCCC--CCHHHHHHHhhhhhccC-CCCCCCCcccCchhHHHHHHHHHHHHHHHHcC----CCCCccceeeecCC
Q 013217 22 SLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQPLS 94 (447)
Q Consensus 22 ~i~l~~~~n~--~~~~v~~a~~~~~~~~~-~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g----~~~~~~~~~v~~~s 94 (447)
-+.|..++++ +|+.+++++.+.+...+ ..+||. .| ...+.+...+++.+.++ ++++ +|.+|+
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G---~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it~ 98 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD----GG---HEALKQAIAEYVNESAAGSSQITPA----NISVGN 98 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC----Cc---hHHHHHHHHHHhCccccccCCCCHH----HEEEcC
Confidence 4778888885 57899999887655421 123432 12 23454333344444332 5554 455699
Q ss_pred cH-HHHHHHHHHhcCCCC-EEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---hC
Q 013217 95 GS-PANFEVYTAILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FR 169 (447)
Q Consensus 95 Gs-~a~~~~~~al~~pgd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---~~ 169 (447)
|+ +++..++.+++.+|| +|++.+|.|.++.. .+...|. +++.++++++++.+|+++++++++. .+
T Consensus 99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEGSILVAEPTFSMYGI--------LAQTLGI--PVVRVGRDPETFEIDLAAAQSAIEQTQNPP 168 (374)
T ss_pred ChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH--------HHHHcCC--EEEEecCCcccCCCCHHHHHHHHHhhcCCC
Confidence 98 788777888888886 89999988765531 2344554 5566666655678999999998874 58
Q ss_pred CcEEEEcCCCCCC--CCChHHHHHHHHH-hCCEEEEehhhhccccccccCCCCCC-c-ccEEEeCCCccc--CCCCCceE
Q 013217 170 PKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMI 242 (447)
Q Consensus 170 ~klii~~~~~~~~--~~~~~~i~~ia~~-~g~~livD~a~~~g~~~~~~~~~~~~-~-~Di~~~s~~K~l--~Gp~gG~i 242 (447)
+|+|+++.|+||+ ..+.+++.++++- +|+++|+|+++. .+..... ...+. . .-+++.|++|++ +|.|.||+
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~-~~~~~~~-~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQTTL-VGELAQHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc-ccCccch-HHHHhcCCCEEEEEecchhccCcccceeee
Confidence 9999998889986 6666666555431 489999999963 3321110 01111 1 237789999987 68899999
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCC
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 321 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 321 (447)
+.++ ++.+.+.....+. +.+...+. +...+++.. ..+.+.+++..+.++.+.+.|.+. ++.+.. +.
T Consensus 247 v~~~------~l~~~l~~~~~~~--~~~~~~q~-a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~ 313 (374)
T PRK02610 247 IGHP------ELIAVLEKVRLPY--NLPSFSQL-AAQLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWP--SA 313 (374)
T ss_pred ecCH------HHHHHHHHhcCCC--CCCHHHHH-HHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCC--Cc
Confidence 9877 6777776544322 22222222 233344321 234444455566677777888764 666543 34
Q ss_pred CeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
..++|+.+.. +.+..++.+.|.++||.+... .+.+||++. + .+++++..+.|++++.
T Consensus 314 g~f~~~~l~~-~~~~~~~~~~l~~~gi~v~~~----------~~~lRls~~---~----~~~~~~~l~~l~~~l~ 370 (374)
T PRK02610 314 ANFLYLRLSQ-DAALAALHQALKAQGTLVRHT----------GGGLRITIG---T----PEENQRTLERLQAALT 370 (374)
T ss_pred ceEEEEeCCC-CCCHHHHHHHHHHCCEEEEeC----------CCeEEEeCC---C----HHHHHHHHHHHHHHHh
Confidence 5667888753 456788888899999998531 357999864 2 5678888888877765
No 161
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.89 E-value=1e-22 Score=196.95 Aligned_cols=267 Identities=19% Similarity=0.264 Sum_probs=179.1
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.+++.++++||++...+ .++|| .+|.++++++++|||+|++....|-+.+. .+.++|.....++-.
T Consensus 70 eAe~~aA~~fGAd~t~f-----lvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~--------alil~ga~Pvyi~p~ 136 (417)
T PF01276_consen 70 EAEELAARAFGADKTFF-----LVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN--------ALILSGAIPVYIPPE 136 (417)
T ss_dssp HHHHHHHHHHTESEEEE-----ESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH--------HHHHHTEEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEE-----EecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCeEEEecCC
Confidence 34578999999997532 37887 89999999999999999999877766542 345666543333322
Q ss_pred cCCCC---CCCCH-----HHHHHHhhhhC----CcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhcccccccc
Q 013217 149 LDEST---GLVDY-----DMLEKTAILFR----PKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASV 215 (447)
Q Consensus 149 ~~~~~---~~id~-----~~l~~~~~~~~----~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~ 215 (447)
+++. +.+++ +.|+++++++. +++|+++.|+|-+ +.|+++|.++|+++|.+|+||+||++.+.+.++
T Consensus 137 -~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~l 215 (417)
T PF01276_consen 137 -DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPL 215 (417)
T ss_dssp -E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred -ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence 2222 24666 99999998732 3448888888877 789999999999999999999999877665544
Q ss_pred CCCCCC-ccc-------EEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc
Q 013217 216 VADPFK-YCD-------VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 286 (447)
Q Consensus 216 ~~~~~~-~~D-------i~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~ 286 (447)
..+.+. ++| +++.|+||++++... ++|.++.+.. --.++++.......+++|++..+|++..|.+++.
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~---v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~ 292 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRI---VDHERVNEALSMHQTTSPSYPLMASLDVARAQME 292 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCC---TTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHS
T ss_pred ccchhhccCccccccceeeeechhhcccccccceEEEecCCCc---ccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence 334343 688 999999999999877 8888888520 0234455443333457899999999999999884
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHH----CCcEeeeCC----C------------------------CCeeEEecC-----
Q 013217 287 SPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGG----S------------------------DNHLVLVDL----- 329 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~----~------------------------~~~~~~v~~----- 329 (447)
....++++++..++++.++++|++ .+++++.+. . |.--+.+.+
T Consensus 293 ~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~ 372 (417)
T PF01276_consen 293 EEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDA 372 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBET
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCc
Confidence 445678889999999999999943 355555321 0 000123333
Q ss_pred ----CCCCCCHHHHHHHHhhcCeEEccC
Q 013217 330 ----RPMGIDGARVEKILDMASITLNKN 353 (447)
Q Consensus 330 ----~~~~~~~~~~~~~L~~~gI~v~~~ 353 (447)
...|+++..+.++|+++||.+.+.
T Consensus 373 ~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~ 400 (417)
T PF01276_consen 373 DGELSELGIPGYIVEKYLREHGIQVEKT 400 (417)
T ss_dssp TSSB-SS---HHHHHHHHHHTTEE-SEE
T ss_pred CCcccccCCCHHHHHHHHHHcCCEEEec
Confidence 456788999999999999999763
No 162
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.1e-20 Score=182.64 Aligned_cols=330 Identities=19% Similarity=0.142 Sum_probs=205.7
Q ss_pred CeeEecCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceeeecCCcH-
Q 013217 22 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS- 96 (447)
Q Consensus 22 ~i~l~~~~n--~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v~~~sGs- 96 (447)
.++|..+.. ..++.+.+++...+..... . ..+ |+.......+.+.+.+++.+.++. +++ +|.+++|+
T Consensus 35 ~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~-~--~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~~ 106 (394)
T PRK06836 35 VFDFSLGNPSVPPPAAVKEALRELAEEEDP-G--LHG-YMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGAA 106 (394)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcCCc-C--ccc-CCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCChH
Confidence 367654443 2467888988776643210 0 011 222222344544444555554443 454 34457776
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+++..++.++++|||.|++.+|.+.++.. .+...|. +++.++.+++++.+|++++++++++ ++++|+++
T Consensus 107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~--------~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~~~~-~~~~v~~~ 175 (394)
T PRK06836 107 GALNVALKAILNPGDEVIVFAPYFVEYRF--------YVDNHGG--KLVVVPTDTDTFQPDLDALEAAITP-KTKAVIIN 175 (394)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEEecCCccCcCCHHHHHhhcCc-CceEEEEe
Confidence 88888999999999999999987766431 2233444 5666667655578999999999976 89999988
Q ss_pred CCCCCC--CCC---hHHHHHHHHH------hCCEEEEehhhhccccccccC-CCCCC--cccEEEeCCCccc--CCCCCc
Q 013217 177 ASAYPR--DFD---YPRMRQIADA------VGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 177 ~~~~~~--~~~---~~~i~~ia~~------~g~~livD~a~~~g~~~~~~~-~~~~~--~~Di~~~s~~K~l--~Gp~gG 240 (447)
+++||+ ..+ +++|.++|++ ||+++++|+++ ..+...+.. +.... ...++++|++|.+ +|.|.|
T Consensus 176 ~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 176 SPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPY-REIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccccCCCCCCChHHccCcEEEEecchhhccCcceeeE
Confidence 788876 445 5677788998 89999999985 444433211 11111 2358889999987 467789
Q ss_pred eEEeecCCcchhhHHH------HhhhccC-CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCc
Q 013217 241 MIFFKKDPVLGVELES------AINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 313 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~------~i~~~~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 313 (447)
++++++ +..+ .+..... .+..+.+.. ...++...+. ... ..+.+.++++.+.+.|++.|+
T Consensus 255 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~----~~~--~~~~~~~~r~~l~~~L~~~g~ 321 (394)
T PRK06836 255 YIAVNP------EMEDADDLVAALVFANRILGFVNAPAL-MQRVVAKCLD----ATV--DVSIYKRNRDLLYDGLTELGF 321 (394)
T ss_pred EEecCH------HHhhhHHHHHHHHHHhhccccccCCHH-HHHHHHHHhC----ChH--HHHHHHHHHHHHHHHHHhCCC
Confidence 999876 3321 1111100 111112222 2222222221 221 245567778888888988888
Q ss_pred EeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 314 KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 314 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+..+ ..++++|+.+.. .+..++.+.|.++||.+..+...+ .++++||++. .+ ++++++..+.|++
T Consensus 322 ~~~~~-~gg~~~~~~~~~--~~~~~~~~~l~~~gv~v~~g~~f~-----~~~~iRi~~~--~~----~~~~~~~i~~l~~ 387 (394)
T PRK06836 322 ECVKP-QGAFYLFPKSPE--EDDVAFCEKAKKHNLLLVPGSGFG-----CPGYFRLSYC--VD----TETIERSLPAFEK 387 (394)
T ss_pred EeecC-CceEEEEEeCCC--CCHHHHHHHHHhCCEEEECchhcC-----CCCeEEEEec--CC----HHHHHHHHHHHHH
Confidence 76543 345666776643 366778888889999996532111 2468999975 23 8899998888888
Q ss_pred HHHHH
Q 013217 394 GVEIT 398 (447)
Q Consensus 394 ~l~~~ 398 (447)
+++.+
T Consensus 388 ~l~~~ 392 (394)
T PRK06836 388 LAKEY 392 (394)
T ss_pred HHHHh
Confidence 88754
No 163
>PLN02231 alanine transaminase
Probab=99.89 E-value=1.3e-20 Score=191.72 Aligned_cols=341 Identities=15% Similarity=0.113 Sum_probs=208.8
Q ss_pred cCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcH-H
Q 013217 21 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs-~ 97 (447)
.-|++-++....|..+++.....+.+.... .. ..|+.......+.+.+.+++.+..|.+ ++ +|.+|+|+ +
T Consensus 130 ~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~-~~--~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe----~I~iT~Ga~~ 202 (534)
T PLN02231 130 SLLDKSETHGLFSADAIERAWQILDQIPGR-AT--GAYSHSQGIKGLRDAIAAGIEARDGFPADPN----DIFLTDGASP 202 (534)
T ss_pred ccCCCCCccccCCHHHHHHHHHHHHhcCCc-cc--cCcCCCCCcHHHHHHHHHHHHhccCCCCCcc----cEEEeCCHHH
Confidence 346665566667777777766666542110 00 113333334566666667777766754 43 45568887 8
Q ss_pred HHHHHHHHhc-CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhh-----CC
Q 013217 98 ANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RP 170 (447)
Q Consensus 98 a~~~~~~al~-~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~-----~~ 170 (447)
|+..++.+++ .+||.|++..|.|+.+.. .+...|. ++++++++++ ++.+|+++|++.+++. ++
T Consensus 203 ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~--------~~~~~g~--~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~ 272 (534)
T PLN02231 203 AVHMMMQLLIRSEKDGILCPIPQYPLYSA--------SIALHGG--TLVPYYLDEATGWGLEISELKKQLEDARSKGITV 272 (534)
T ss_pred HHHHHHHHhccCCCCEEEEeCCCChhHHH--------HHHHcCC--EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCe
Confidence 9999999998 489999999998876532 2344554 5667767643 4789999999988652 68
Q ss_pred cEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcccccc-ccCCCCC---------Ccc---cEEEeCCCc
Q 013217 171 KLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF---------KYC---DVVTTTTHK 232 (447)
Q Consensus 171 klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~-~~~~~~~---------~~~---Di~~~s~~K 232 (447)
|+|++..|+||+ .. .+++|.++|+++|+++|+|+++ ..+++. +....++ ..- -+++.|++|
T Consensus 273 k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY-~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK 351 (534)
T PLN02231 273 RALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVY-QENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSK 351 (534)
T ss_pred EEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc-hhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCc
Confidence 888888788886 44 4678899999999999999995 454542 1111111 001 256789999
Q ss_pred cc---CCCCCceEEee--cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHh--cChhHH-------HHHHHHH
Q 013217 233 SL---RGPRGGMIFFK--KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFK-------VYQNKVV 298 (447)
Q Consensus 233 ~l---~Gp~gG~i~~~--~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~--~~~~~~-------~~~~~~~ 298 (447)
.+ +|.|+||+.+. ++ ++.+.+.+.... ..+++...+++ ...+++.- ....|+ +..+.+.
T Consensus 352 ~~~g~pGlRiGy~~~~~~~~-----~l~~~l~k~~~~-~~~s~~~~Q~~-~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~ 424 (534)
T PLN02231 352 GYYGECGKRGGYMEVTGFTS-----DVREQIYKVASV-NLCSNISGQIL-ASLVMSPPKPGDESYESYMAEKDGILSSLA 424 (534)
T ss_pred ccccCCccceEEEEEecCCH-----HHHHHHHHHHhh-hcCCChHHHHH-HHHHhCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 64 59999999863 22 566666543222 12232333322 22233210 011222 2356788
Q ss_pred HHHHHHHHHHHHC-CcEeeeCCCCCeeEEecCCC--CCC---------CHHHH-HHHHhhcCeEEccCCCCCCCC-C-CC
Q 013217 299 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP--MGI---------DGARV-EKILDMASITLNKNSVPGDKS-A-LV 363 (447)
Q Consensus 299 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~--~~~---------~~~~~-~~~L~~~gI~v~~~~~p~~~~-~-~~ 363 (447)
++++.+.+.|++. |+.+..+ ..++++|.++.. ..+ +...+ ..+|++.||.+. ||... . ..
T Consensus 425 ~r~~~l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vv----PGs~Fg~~~g 499 (534)
T PLN02231 425 RRAKTLEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVV----PGSGFGQVPG 499 (534)
T ss_pred HHHHHHHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEe----CCcccCCCCC
Confidence 8888999999885 7877543 456777755531 111 12223 446678899995 44431 1 12
Q ss_pred CCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 364 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 364 ~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
...+|+++ .++ +++++..++.|.+.++.
T Consensus 500 ~~~~Rit~--~~~----~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 500 TWHFRCTI--LPQ----EDKIPAIVSRLTEFHKS 527 (534)
T ss_pred CCeEEEEe--CCC----HHHHHHHHHHHHHHHHH
Confidence 33699986 344 77877777777766654
No 164
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=2e-20 Score=182.56 Aligned_cols=297 Identities=20% Similarity=0.176 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccc
Q 013217 63 YIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 140 (447)
Q Consensus 63 ~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (447)
...++++..++.+...++.. .++ .+..++|++++..++.++.++||+|+++++.|.++.. .+...|.
T Consensus 37 ~~~~l~~~l~~~l~~~~~~~~~~~~---~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~ 105 (350)
T cd00609 37 GLPELREAIAEWLGRRGGVDVPPEE---IVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGA 105 (350)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcce---EEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC
Confidence 34567665556666665532 221 2334555699999999999999999999988776532 2334443
Q ss_pred eeEEEecccCCCCCCCCH--HHHHHHhhhhCCcEEEEcCCCCCC--CCChH---HHHHHHHHhCCEEEEehhhhcccccc
Q 013217 141 YFESMPYRLDESTGLVDY--DMLEKTAILFRPKLIIAGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAA 213 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~--~~l~~~~~~~~~klii~~~~~~~~--~~~~~---~i~~ia~~~g~~livD~a~~~g~~~~ 213 (447)
+++.++.+. .+..+. +.++....+ ++++|+++.+++++ ..|.+ +|.++|+++|+++++|++|+.+.. .
T Consensus 106 --~~~~i~~~~-~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~-~ 180 (350)
T cd00609 106 --EVVPVPLDE-EGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY-D 180 (350)
T ss_pred --EEEEEeccc-ccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee-C
Confidence 445555553 334443 666666555 89999998766654 56654 555899999999999999865432 2
Q ss_pred ccCC----CC-CCcccEEEeCCCcccC--CCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc
Q 013217 214 SVVA----DP-FKYCDVVTTTTHKSLR--GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 286 (447)
Q Consensus 214 ~~~~----~~-~~~~Di~~~s~~K~l~--Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~ 286 (447)
+... .. ..+.|++++|+||+++ |++.|+++++++ ++.+.+...... ..++++.....++..+++...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 254 (350)
T cd00609 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-----ELLERLKKLLPY-TTSGPSTLSQAAAAAALDDGE 254 (350)
T ss_pred CcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-----HHHHHHHHHHHh-cccCCChHHHHHHHHHHhCcH
Confidence 2211 11 1147899999999985 556699999874 466666543322 234556666666666666543
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCe
Q 013217 287 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGG 366 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 366 (447)
.++++..+++.++++++.+.|.+.+...........++++.+... .+.+.+.+.|.++||.+.....+. +..+.+
T Consensus 255 -~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~---~~~~~~ 329 (350)
T cd00609 255 -EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFG---EGGEGF 329 (350)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC-ChHHHHHHHHHhCCEEEecccccc---cCCCCe
Confidence 456778888999999999999986654322223345566665432 345678888999999996542221 123568
Q ss_pred EEEecCccccCCCCHHHHHHHHHHHH
Q 013217 367 IRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 367 iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
+|++++.. .+|+++++++|+
T Consensus 330 iRi~~~~~------~~~i~~~~~al~ 349 (350)
T cd00609 330 VRLSFATP------EEELEEALERLA 349 (350)
T ss_pred EEEEeeCC------HHHHHHHHHHhh
Confidence 99997654 689999998875
No 165
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=6.6e-21 Score=187.50 Aligned_cols=318 Identities=13% Similarity=0.089 Sum_probs=200.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 110 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~pg 110 (447)
+++.-++++...+.+.+. ++..+..+.+| +++++++|.+. .+.++||++|+..++.++ ++||
T Consensus 9 ~~~~~~~~~~~~l~~~~~--------~g~~~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~G 71 (375)
T PRK11706 9 VVGTELDYIQQAMSSGKL--------CGDGGFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPG 71 (375)
T ss_pred CCHHHHHHHHHHHHcCCc--------cCCCHHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 445556666666655321 22234456666 57888889864 244567778988777766 7999
Q ss_pred CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHH
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 190 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~ 190 (447)
|+|+++++.|.+... .+...|. +++.++++++++.+|++++++++++ +||+|++++ .++...|+++|.
T Consensus 72 d~Viv~~~t~~~~~~--------~~~~~G~--~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~-~~G~~~~~~~i~ 139 (375)
T PRK11706 72 DEVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH-YAGVACEMDTIM 139 (375)
T ss_pred CEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC-CCCCccCHHHHH
Confidence 999999988776532 2334554 6667778767778999999999987 899988764 234478999999
Q ss_pred HHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCC--cccCCCCCceEEeecCCcchhhHHHHhhhccCCC--
Q 013217 191 QIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG-- 265 (447)
Q Consensus 191 ~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~--K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~-- 265 (447)
++|+++|+++|+|++|+.|....+. ++. ..|+.++|+| |++..+.||+++++++ ++.+++......+
T Consensus 140 ~la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~-----~~~~~~~~~~~~g~~ 211 (375)
T PRK11706 140 ALAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCFSFHETKNYTAGEGGALLINDP-----ALIERAEIIREKGTN 211 (375)
T ss_pred HHHHHcCCEEEEECccccccccCCe---eeecCcCEEEEeCCCCccccccCCeEEEECCH-----HHHHHHHHHHHcCCC
Confidence 9999999999999999888643321 222 3588888888 9986666677777654 5665443322111
Q ss_pred ---------------CCCC-CcH-HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC---C-cEeee--CC--C
Q 013217 266 ---------------LQGG-PHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLVS--GG--S 320 (447)
Q Consensus 266 ---------------~~g~-p~~-~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~--~~--~ 320 (447)
..|. ..+ ...+++ ++.++ ..+++..++..++++.+.+.|.+. | +.+.. ++ .
T Consensus 212 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~--~~~ql--~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 287 (375)
T PRK11706 212 RSQFFRGQVDKYTWVDIGSSYLPSELQAAY--LWAQL--EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKH 287 (375)
T ss_pred cchhhccCCCcceeeecccccCcCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCce
Confidence 0111 111 222322 22222 235666777788888888888763 2 33221 11 1
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCC-C----------------CCeEEEecCccccCCCCHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSAL-V----------------PGGIRIGSPAMTTRGFSEKE 383 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~-~----------------~~~iRig~~~~~~~g~~~~d 383 (447)
..+++++.+.. +.+..++.+.|.++||.++..+.|.+..+. . ...+. +|.. -.++++|
T Consensus 288 ~~~~~~~~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~--lP~~--~~l~~~~ 362 (375)
T PRK11706 288 NAHMFYIKLRD-LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLR--LPLF--YNLTDVE 362 (375)
T ss_pred eeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEe--ccCC--CCCCHHH
Confidence 23344554432 346789999999999998765444332110 0 01122 2211 2567999
Q ss_pred HHHHHHHHHHHH
Q 013217 384 FVAIADFIHEGV 395 (447)
Q Consensus 384 i~~l~~~i~~~l 395 (447)
++++++.|++.+
T Consensus 363 ~~~i~~~i~~~~ 374 (375)
T PRK11706 363 QRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 166
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=6.8e-20 Score=182.23 Aligned_cols=335 Identities=17% Similarity=0.160 Sum_probs=204.9
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHc--CCCCCccceeeecCCcH
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPLSGS 96 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~--g~~~~~~~~~v~~~sGs 96 (447)
+.+.|..+++. .++.+.+++...... ..+|+.. ....++.+...+++. .. +++++ +|.+++|+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~------~g~~~lr~~ia~~~~-~~~~~~~~~----~i~~t~G~ 97 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSHS------QGIPELREAFAKYYK-KWGIDVEPD----EILITNGG 97 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCCC------CCCHHHHHHHHHHHH-HhCCCCCcc----eEEEcCCh
Confidence 35777766663 578888888764322 1233321 112334333333333 12 34454 34457765
Q ss_pred -HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCC-C-CCHHHHHHHhhhhCCcEE
Q 013217 97 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-L-VDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 97 -~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-id~~~l~~~~~~~~~kli 173 (447)
+++..++.++++|||+|++.+|.|..+.. .....|. ++++++++.+++ . .|++++++++++ ++++|
T Consensus 98 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~~~v 166 (397)
T PRK07568 98 SEAILFAMMAICDPGDEILVPEPFYANYNG--------FATSAGV--KIVPVTTKIEEGFHLPSKEEIEKLITP-KTKAI 166 (397)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCC--EEEEeecCcccCCCCCCHHHHHHhcCc-cceEE
Confidence 88888888899999999999987654321 1233454 455555543333 3 468999998876 89999
Q ss_pred EEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCC--Cc---ccEEEeCCCccc--CCCCCc
Q 013217 174 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--KY---CDVVTTTTHKSL--RGPRGG 240 (447)
Q Consensus 174 i~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~--~~---~Di~~~s~~K~l--~Gp~gG 240 (447)
+++.++||+ .. ++++|.++|+++|+++++|+++ .++.+.+. .++.. .. .-+++.|++|++ +|.|.|
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 245 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVY-REFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccc-hhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence 888777775 44 4789999999999999999985 44443321 11111 11 237889999987 478889
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 319 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 319 (447)
+++++++ ++.+.+....... .+.+...+ .+++.+++.. ...+++..+.+.++++.+.+.|.+. |+.+..+
T Consensus 246 ~~~~~~~-----~~~~~~~~~~~~~-~~~s~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p- 316 (397)
T PRK07568 246 CLISKNK-----ELIAAAMKLCQAR-LSPPTLEQ-IGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP- 316 (397)
T ss_pred EEecCCH-----HHHHHHHHHhhcc-CCCCcHHH-HHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-
Confidence 9998642 5665554322221 23333333 3334445421 2234666777888889999999874 6654433
Q ss_pred CCCeeEEecCCCCCCCHHHHHHHHhh------cCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPMGIDGARVEKILDM------ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 320 ~~~~~~~v~~~~~~~~~~~~~~~L~~------~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
..+.++|+++... +..++.+.|.+ .||.+..+...+..+...++++|+++. .+ ++++++..+.|.+
T Consensus 317 ~g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~----~~~~~~~~~~l~~ 388 (397)
T PRK07568 317 KGAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LN----EEDLKRAMEILKE 388 (397)
T ss_pred CcceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CC----HHHHHHHHHHHHH
Confidence 3456677777532 45667666643 689986532211111122468999964 22 7889999888888
Q ss_pred HHHH
Q 013217 394 GVEI 397 (447)
Q Consensus 394 ~l~~ 397 (447)
+++.
T Consensus 389 ~l~~ 392 (397)
T PRK07568 389 ALEK 392 (397)
T ss_pred HHHH
Confidence 7764
No 167
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.1e-20 Score=189.94 Aligned_cols=342 Identities=15% Similarity=0.164 Sum_probs=203.5
Q ss_pred cCeeEecCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--C-CccceeeecCCc
Q 013217 21 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--E-NKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~n--~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~-~~~~~~v~~~sG 95 (447)
+.++|..++. .+|+.+.++......+ .||.. .+. ....|..+...+.+.++.. + ++ .+|.+|+|
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~----~Y~~~--~g~---~~lreaia~~~~~~~~~~~~~~~~~--~~I~vT~G 169 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGD----NYPVP--DRM---LKHTEKIVKDYLRQEMCGGRPPKGE--FDLFAVEG 169 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcC----CCCCC--CCC---HHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeCC
Confidence 3467766655 2366677755444322 23332 111 2334444444554443321 2 11 14556888
Q ss_pred H-HHHHHHHHH-----hcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhh
Q 013217 96 S-PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF 168 (447)
Q Consensus 96 s-~a~~~~~~a-----l~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~ 168 (447)
+ +|+..++.+ +++|||+|++++|.|..+.. .+.+.|...++++++.++ +++.+|++++++++++
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~- 240 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSELEKLRDP- 240 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-
Confidence 7 888888876 68999999999998876532 223444455777776654 3578999999998876
Q ss_pred CCcEEEEcCCCCCC--CCC---hHHHHHHHHH--hCCEEEEehhhhccccccccCCCCC---CcccEEEeCCCccc--CC
Q 013217 169 RPKLIIAGASAYPR--DFD---YPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RG 236 (447)
Q Consensus 169 ~~klii~~~~~~~~--~~~---~~~i~~ia~~--~g~~livD~a~~~g~~~~~~~~~~~---~~~Di~~~s~~K~l--~G 236 (447)
++|+|++++|+||+ ..+ +++|.++|++ +|+++|+|+++. .+.. . +.+.+ +..-+++.|++|++ +|
T Consensus 241 ~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~-~-~~s~~~~~~~~~I~v~SfSK~f~mtG 317 (527)
T PRK09275 241 SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG-TFVD-D-FRSLFAVLPYNTILVYSFSKYFGATG 317 (527)
T ss_pred CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh-hhcc-c-ccCHHHhCCCCEEEEeehhhhccCcH
Confidence 89999998888886 455 6788888965 499999999963 3332 1 11111 12358889999986 68
Q ss_pred CCCceEEeecCCcchhhHHHHh--------------------------------hhccCCCCCCCCcHHHHH-H---HHH
Q 013217 237 PRGGMIFFKKDPVLGVELESAI--------------------------------NNAVFPGLQGGPHNHTIG-G---LAV 280 (447)
Q Consensus 237 p~gG~i~~~~~~~~~~~~~~~i--------------------------------~~~~~~~~~g~p~~~~~a-a---l~~ 280 (447)
+|.|+++++++.. ...+.+.+ .........|.+.+.+++ + +.+
T Consensus 318 ~RlG~i~~~~~~v-~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~a 396 (527)
T PRK09275 318 WRLGVIALHEDNV-FDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFA 396 (527)
T ss_pred hHHhhhhcCchhH-HHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 9999999987400 00011111 111111122333334443 3 222
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeee-CCCCCeeEEecCCCCC---------------CCHHH-HHHHH
Q 013217 281 CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVLVDLRPMG---------------IDGAR-VEKIL 343 (447)
Q Consensus 281 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~v~~~~~~---------------~~~~~-~~~~L 343 (447)
+++. .....++..+.+.++++.+.+.| |+.+.. ++...+++|+|+...+ .+..+ +.+++
T Consensus 397 ll~~-~~~~~~~~~~~~~~Rr~~l~~~L---g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll 472 (527)
T PRK09275 397 LLDE-EDAYKKAMKDIIRRRYKALYEGL---GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLA 472 (527)
T ss_pred HHhC-chHHHHHHHHHHHHHHHHHHHHc---CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHH
Confidence 2332 11223555667777777777766 544321 2234677788875311 13444 44566
Q ss_pred hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHH
Q 013217 344 DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 399 (447)
Q Consensus 344 ~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~ 399 (447)
++.||.+ +||.......+++|+++... +++++.++.+.|.+.+..+.
T Consensus 473 ~e~gV~v----~PG~~Fg~~~~~vRis~a~~-----~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 473 EETGVVL----LPGGGFGGPEWSVRVSLANL-----NEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred hcCCEEE----eCchhhCCCCCeEEEEEecC-----CHHHHHHHHHHHHHHHHHHH
Confidence 7899998 55554211245799997422 37899999999999888764
No 168
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=2.7e-21 Score=188.66 Aligned_cols=310 Identities=16% Similarity=0.112 Sum_probs=199.1
Q ss_pred CeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHHH
Q 013217 22 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF 100 (447)
Q Consensus 22 ~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~ 100 (447)
.+.|..+||+.++... +.....+ .||..++ ..+ ++++++.+|++++ +|.+++|+ +++.
T Consensus 30 ~~~l~~Nenp~~~~~~--~~~~~~~----~Yp~~~~-------~~l----~~~~a~~~g~~~~----~I~~~~Gs~e~i~ 88 (351)
T PRK01688 30 DVWLNANEYPTAVEFQ--LTQQTLN----RYPECQP-------KAV----IENYAAYAGVKPE----QVLVSRGADEGIE 88 (351)
T ss_pred ceEecCCCCCCCCChh--hcccccc----cCCCCCh-------HHH----HHHHHHHhCCCHH----HEEEcCCHHHHHH
Confidence 4889999998643321 1111112 3444321 233 3578888999886 45568988 8999
Q ss_pred HHHHHhcCCC-CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 013217 101 EVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 179 (447)
Q Consensus 101 ~~~~al~~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~ 179 (447)
.++.++++|| |+|++.+|.|+.+. ..+...|. +++.++++ +++.+|++++++++ + ++++|+++.|+
T Consensus 89 ~~~~~~~~~g~~~vli~~P~y~~y~--------~~~~~~G~--~~~~v~~~-~~~~~d~~~l~~~~-~-~~~lv~l~nPn 155 (351)
T PRK01688 89 LLIRAFCEPGKDAILYCPPTYGMYS--------VSAETIGV--EIRTVPTL-DNWQLDLPAIADNL-D-GVKVVYVCSPN 155 (351)
T ss_pred HHHHHhcCCCCCEEEEcCCCHHHHH--------HHHHHcCC--EEEEeecC-CCCCCCHHHHHHhc-c-CCcEEEEeCCC
Confidence 8999999997 89999988775432 12334554 45555565 35789999999887 4 89999999889
Q ss_pred CCC--CCChHHHHHHHHHh--CCEEEEehhhhccccccccCCCCCC-c-ccEEEeCCCccc--CCCCCceEEeecCCcch
Q 013217 180 YPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 251 (447)
Q Consensus 180 ~~~--~~~~~~i~~ia~~~--g~~livD~a~~~g~~~~~~~~~~~~-~-~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~ 251 (447)
||+ ..+.+++.++++.. +.++++|+++ ..+.........+. + --+++.|++|++ +|.|.|++++++
T Consensus 156 NPTG~~~~~~~l~~l~~~~~~~~~vivDEay-~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~----- 229 (351)
T PRK01688 156 NPTGNLINPQDLRTLLELTRGKAIVVADEAY-IEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE----- 229 (351)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECch-hhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH-----
Confidence 886 67777777766542 6899999996 33321100000001 1 237889999986 477789999887
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCeeEEecCC
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~ 330 (447)
++.+.+.+...+... +....++...++.......+++.++.+.++++++.+.|.+. |+..+.+ +...++|+++.
T Consensus 230 -~~i~~l~~~~~~~~v---~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-s~~nfi~~~~~ 304 (351)
T PRK01688 230 -EVINLLLKVIAPYPL---STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFD-SETNYILARFT 304 (351)
T ss_pred -HHHHHHHhccCCCCC---CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC-CCCcEEEEEcC
Confidence 677777765444321 22222222223331101234566777888889999999885 5543333 34556777764
Q ss_pred CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 331 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 331 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
+..++.+.|.++||.++..... +...+++||++. + ++|++++.++|
T Consensus 305 ----~~~~l~~~L~~~gi~vr~~~~~----~~~~~~iRis~~---~----~~e~~~l~~al 350 (351)
T PRK01688 305 ----ASSAVFKSLWDQGIILRDQNKQ----PGLSNCLRITIG---T----REECQRVIDAL 350 (351)
T ss_pred ----CHHHHHHHHHHCCeEEEECCCc----CCCCCeEEEeCC---C----HHHHHHHHHhh
Confidence 4677888888999999753211 112458999965 3 79999998876
No 169
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.88 E-value=4e-20 Score=197.31 Aligned_cols=304 Identities=19% Similarity=0.178 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----CCCC----EEEEecCCCCcccCCCcccccccc
Q 013217 64 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----KPHD----RIMGLDLPHGGHLSHGFMTPKRRV 135 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~----~pgd----~Vl~~~~~~~~~~~~~~~~~~~~~ 135 (447)
.-+++...++++++++|.+. +.+++.+|++++.+.++++. ++|| +|++++..|+++.. .+
T Consensus 540 ~l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~--------sa 607 (954)
T PRK05367 540 YRELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA--------SA 607 (954)
T ss_pred HHHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH--------HH
Confidence 33455566789999999985 46666777788866555543 5676 58888887876532 22
Q ss_pred ccccceeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccc
Q 013217 136 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLV 211 (447)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~ 211 (447)
...|. +++.++++ .++.+|+++|+++++++ ++.+|+++.+++.+ ..|+++|+++||++|+++++|+||..+++
T Consensus 608 ~~~G~--~vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~ 684 (954)
T PRK05367 608 VMAGM--KVVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQV 684 (954)
T ss_pred HHCCC--EEEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhcc
Confidence 34454 56666666 45899999999999764 35566666555555 36899999999999999999999976654
Q ss_pred ccccCCCCCC-cccEEEeCCCcccCCCCC------ceEEeecCCcchhhHHHHhhhc-----cCCCCCCCCcHHH----H
Q 013217 212 AASVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHT----I 275 (447)
Q Consensus 212 ~~~~~~~~~~-~~Di~~~s~~K~l~Gp~g------G~i~~~~~~~~~~~~~~~i~~~-----~~~~~~g~p~~~~----~ 275 (447)
.. ..|.. ++|++++|+||||++|.| |++++++ .+...+... ......|...... .
T Consensus 685 ~l---~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~------~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al 755 (954)
T PRK05367 685 GL---ARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA------HLAPFLPGHPVQIAGGETGIGAVSAAPFGSAS 755 (954)
T ss_pred CC---CChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecc------cccccCCCCccCcCCCCCCcCcchhHHHHHHH
Confidence 32 12322 699999999999865554 5888876 333222111 0111112222111 1
Q ss_pred HH--HHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeC---CCCCeeEEecCCCC----CCCHHHHHHHHhhc
Q 013217 276 GG--LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG---GSDNHLVLVDLRPM----GIDGARVEKILDMA 346 (447)
Q Consensus 276 aa--l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~v~~~~~----~~~~~~~~~~L~~~ 346 (447)
.+ .+..++.+..+++++..++...++++++++|.+ ++++... +...|-+++++++. +++..++.+.|.++
T Consensus 756 ~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~ 834 (954)
T PRK05367 756 ILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDY 834 (954)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHC
Confidence 11 222344555567788888888999999999987 4554332 12245566776431 35668899999999
Q ss_pred CeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013217 347 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 402 (447)
Q Consensus 347 gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~~~ 402 (447)
||.......| ..+.+||++...++ ++|++++++++..+......++
T Consensus 835 G~~~~t~~~p------v~~~l~i~ptE~~s----~~elDr~~~al~~i~~e~~~~~ 880 (954)
T PRK05367 835 GFHAPTMSFP------VAGTLMVEPTESES----KAELDRFCDAMIAIRAEIDEVE 880 (954)
T ss_pred CCeEeecCCc------cCCEEEEEeeecCC----HHHHHHHHHHHHHHHHHHHHhh
Confidence 9987542222 24689999988888 9999999999988887765543
No 170
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.88 E-value=2.2e-20 Score=187.39 Aligned_cols=303 Identities=17% Similarity=0.158 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHHHHcCCC--CCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccce
Q 013217 65 DELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 141 (447)
Q Consensus 65 ~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 141 (447)
..+.+...+++....|.. ++ +|.+|+|+ +|+..++..+++|||+|++.+|.|.+.+. .++..|.
T Consensus 135 ~~LR~~ia~~l~~~~g~~~~~~----~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~--------~~~~~g~- 201 (459)
T COG1167 135 PELREAIAAYLLARRGISCEPE----QIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ--------ALEALGA- 201 (459)
T ss_pred HHHHHHHHHHHHHhcCCccCcC----eEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC-
Confidence 344444455666455655 43 45669999 89999999999999999999998876642 3344554
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCCCCC--CCCh---HHHHHHHHHhCCEEEEehhhhcccccccc
Q 013217 142 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASV 215 (447)
Q Consensus 142 ~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~-~~~~~~--~~~~---~~i~~ia~~~g~~livD~a~~~g~~~~~~ 215 (447)
+++++++| ...+|+|+|++.+..++||++++. ..+||+ ..+. ++|.++|++||+++|.|+.+ .-+.+.+.
T Consensus 202 -~~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y-~el~~~~~ 277 (459)
T COG1167 202 -RVIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYY-GELRYDGP 277 (459)
T ss_pred -cEEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcc-hhhhcCCC
Confidence 66776676 346999999999988889999998 446775 4444 69999999999999999974 33343332
Q ss_pred CCCCCC-----cccEEEeCCCccc-CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH-hcCh
Q 013217 216 VADPFK-----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSP 288 (447)
Q Consensus 216 ~~~~~~-----~~Di~~~s~~K~l-~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~-~~~~ 288 (447)
.+.++. +.-++++|++|++ +|.|.||++.++ ++.+.+.........+++. ....+++.-+.. ....
T Consensus 278 p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~------~~~~~~~~~k~~~~~~~s~-~~Q~~la~~l~~G~~~~ 350 (459)
T COG1167 278 PPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP------ELIEKLLRLKQAADLGPSS-LSQAALAAFLLSGHYDR 350 (459)
T ss_pred CCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCH------HHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHcCCHHH
Confidence 222222 2348999999997 689999999998 6666554432222222222 222233322221 0011
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHCC--cEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEcc-CCCCCCCCCCCCC
Q 013217 289 EFKVYQNKVVSNCRALASRLVELG--YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK-NSVPGDKSALVPG 365 (447)
Q Consensus 289 ~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~-~~~p~~~~~~~~~ 365 (447)
..+...+.+.++.+.+.+.|.+.+ ...+..+....++|+.+.. +++..++...+.++||.+.. +... ...+...+
T Consensus 351 hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~-~~~~~~l~~~a~~~gv~i~~~g~~f-~~~~~~~~ 428 (459)
T COG1167 351 HLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPE-GIDARELLAAALEKGVVVTPLGSAF-SADGDPRN 428 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCC-CCCHHHHHHHHHHCCCEEEcCCccc-cCCCCCCC
Confidence 124445555666677788887732 2222333446778888854 57888888888889999865 2211 11111345
Q ss_pred eEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 366 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 366 ~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
++|+|+...+ ++++++.++.|.+++...
T Consensus 429 ~~Rl~~s~~~-----~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 429 GLRLSFSSPS-----EEEIEEGIKRLAALLREA 456 (459)
T ss_pred eEEEEcCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 8999987554 688888888888777643
No 171
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=8.1e-21 Score=185.70 Aligned_cols=310 Identities=19% Similarity=0.163 Sum_probs=198.5
Q ss_pred cCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHH
Q 013217 21 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 99 (447)
Q Consensus 21 ~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~ 99 (447)
..+.|..+||+.++.-.-.+.. .++ ||.. . ...+. +.+++++|++++ +|.+++|+ +++
T Consensus 32 ~~~~l~~ne~~~~~~~~~~~~~--~~~----Yp~~------~-~~~Lr----~aia~~~~~~~~----~I~it~Gs~~~i 90 (354)
T PRK04635 32 GDIWINANESPFNNEYKLDLAR--LNR----YPEC------Q-PPELI----NAYSAYAGVAPE----QILTSRGADEAI 90 (354)
T ss_pred CcEEeeCCCCCCCCChhhhhHH--hcc----CCCC------C-HHHHH----HHHHHHhCcCHH----HEEEeCCHHHHH
Confidence 3478999999764331111111 122 3322 1 23443 567778899886 44558988 899
Q ss_pred HHHHHHhcCCC-CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 100 FEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 100 ~~~~~al~~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
..++.++++|| |+|++.+|.|..+. ..+...|. +++.++++ +++.+|++.+++ + + +||+|+++++
T Consensus 91 ~~~~~~~~~~g~d~vlv~~P~y~~y~--------~~~~~~g~--~v~~v~~~-~~~~~~~~~l~~-~-~-~~~li~i~nP 156 (354)
T PRK04635 91 ELLIRAFCEPGQDSIACFGPTYGMYA--------ISAETFNV--GVKALPLT-ADYQLPLDYIEQ-L-D-GAKLVFICNP 156 (354)
T ss_pred HHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEecC-CCCCCCHHHHHh-c-c-CCCEEEEeCC
Confidence 99999999999 89999988776432 12234454 55555565 357899998873 3 4 8999999988
Q ss_pred CCCC--CCChHHHHHHHHHh-CCEEEEehhhhccccccccCCCCCC--cccEEEeCCCccc--CCCCCceEEeecCCcch
Q 013217 179 AYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 251 (447)
Q Consensus 179 ~~~~--~~~~~~i~~ia~~~-g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~ 251 (447)
+||+ ..+.+++.++++.. ++++++|+++. .+........... ..-+++.|+||++ +|.|.|+++.++
T Consensus 157 ~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~----- 230 (354)
T PRK04635 157 NNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANE----- 230 (354)
T ss_pred CCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCH-----
Confidence 9886 78899999998864 79999999963 3221100000000 0126789999986 577889999987
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC-cEeeeCCCCCeeEEecCC
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~v~~~ 330 (447)
++.+.+.....+. +.+...+.++ ..++........++..+++.++++.+.+.|++.+ +++..+ ...++|+++.
T Consensus 231 -~~~~~l~~~~~~~--~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~f~~~~~~ 304 (354)
T PRK04635 231 -ELIEILMRVIAPY--PVPLPVSEIA-TQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG--NGNYVLAKFD 304 (354)
T ss_pred -HHHHHHHhhcCCC--CCCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CCcEEEEECC
Confidence 6777776543332 2222222222 2233221111234556677888889999998865 766543 2345677764
Q ss_pred CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 331 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 331 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
+..++.+.|.++||.++.... +..++++|+++ .+ ++|++++.++|++
T Consensus 305 ----~~~~~~~~l~~~gv~v~~~~~-----~~~~~~lRis~---~~----~e~~~~l~~al~~ 351 (354)
T PRK04635 305 ----DVDAVFKALWDAGIVARAYKD-----PRLANCIRFSF---SN----RAETDKLIGLIRN 351 (354)
T ss_pred ----CHHHHHHHHHHCCEEEEECCC-----CCCCCeEEEEe---CC----HHHHHHHHHHHHH
Confidence 456788889999999964311 11245899995 34 8999999998865
No 172
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.9e-20 Score=182.15 Aligned_cols=313 Identities=16% Similarity=0.125 Sum_probs=200.5
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
..++|..++|. +||.+.+++.+.+.. ..+||.. | ...+. +.+++.++++++ +|.+++|+ +
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~----~---~~~lr----~~ia~~~~~~~~----~I~it~G~~~ 93 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPKA----S---HADLT----AALADRWDVSPE----QVWLANGGDG 93 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCCC----C---HHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence 56889888885 578888888776543 2344421 1 12333 456677888876 45568887 8
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
++..++.++++|||+|++.+|.|+.+.. .....|..+..++++.+ +++.+|.+++++.. + ++|+|++++
T Consensus 94 al~~~~~~~~~~gd~V~v~~P~y~~~~~--------~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~-~-~~k~i~l~~ 162 (357)
T PRK14809 94 ALDYLARAMLDPGDTVLVPDPGFAYYGM--------SARYHHGEVREYPVSKA-DDFEQTADTVLDAY-D-GERIVYLTS 162 (357)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCeEEEEecccC-cCCCcCHHHHHHhh-c-CCcEEEEeC
Confidence 8888999999999999999987653311 22344544444443222 34678888887665 2 689999998
Q ss_pred CCCCC--CCChHHHHHHHHHh--CCEEEEehhhhccccccccCCCC-CC--cccEEEeCCCccc--CCCCCceEEeecCC
Q 013217 178 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADP-FK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 248 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~~--g~~livD~a~~~g~~~~~~~~~~-~~--~~Di~~~s~~K~l--~Gp~gG~i~~~~~~ 248 (447)
++||+ ..+.+++.++++.. ++++|+|+++. .+...+. ..+ +. ..-+++.|++|++ +|.|.|++++++
T Consensus 163 p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~-~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-- 238 (357)
T PRK14809 163 PHNPTGSEIPLDEVEALAERTDEETLVVVDEAYG-EFAERPS-AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE-- 238 (357)
T ss_pred CCCCCCcCCCHHHHHHHHHhCccCcEEEEechhh-hccCCch-hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--
Confidence 88886 67777777777654 78999999963 3332211 000 11 1237789999997 588889999987
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEe
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 327 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v 327 (447)
++.+++.+...+. +.+.....+...++. .++ +++..+.+.++++.+.+.|...++ . ....++|+
T Consensus 239 ----~~~~~~~~~~~~~---~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~~g~f~~~ 303 (357)
T PRK14809 239 ----EWADAYARVNTPF---AASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAPTW---E--SAGNFVLA 303 (357)
T ss_pred ----HHHHHHHHhCCCC---CCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCccC---C--CCCCEEEE
Confidence 6777776643222 223322222222332 223 355566666667777777754322 2 23456677
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
++. +..++.+.|.++||.+..+...+ .++++|+++. + .+++++..+.|+++++
T Consensus 304 ~~~----~~~~~~~~l~~~gv~v~~g~~f~-----~~~~iRls~~---~----~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 304 EVG----DASAVAEAAQERGVIVRDCTSFG-----LPECIRITCG---T----REETERAVEVLNEVLA 356 (357)
T ss_pred ECC----CHHHHHHHHHHCCEEEEECccCC-----CCCeEEEecC---C----HHHHHHHHHHHHHHhc
Confidence 763 45778888989999996543221 1358999853 3 6889999988887653
No 173
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.88 E-value=2.1e-20 Score=183.63 Aligned_cols=318 Identities=14% Similarity=0.093 Sum_probs=196.9
Q ss_pred HHhhcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC---CCCccceeee
Q 013217 17 ERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL---DENKWGVNVQ 91 (447)
Q Consensus 17 ~~~~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~---~~~~~~~~v~ 91 (447)
......++|..++.. .++.+++++...... .+|+.. .....+.+.+.+++.+.+|. +++ +|.
T Consensus 24 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~~------~G~~~lr~~ia~~l~~~~~~~~~~~~----~I~ 90 (364)
T PRK07865 24 AHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPTT------AGTPELREAIVGWLARRRGVTGLDPA----AVL 90 (364)
T ss_pred hcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCCc------cCCHHHHHHHHHHHHHHcCCCCCCcc----cEE
Confidence 333456788766542 357788887654322 133322 11234555555677777664 354 455
Q ss_pred cCCcH-HHHHHHHHHh-cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhC
Q 013217 92 PLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR 169 (447)
Q Consensus 92 ~~sGs-~a~~~~~~al-~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~ 169 (447)
+|+|+ +++..++..+ ++|||+|++.+|.|.++.. .+...|. +++.++ +++++.. .+
T Consensus 91 it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~--------~~~~l~~----~~ 148 (364)
T PRK07865 91 PVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGA--TVVRAD--------SLTELGP----QR 148 (364)
T ss_pred EccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCC--EEEecC--------ChhhCCc----cc
Confidence 69998 7777777777 7999999999998876532 2233443 444432 2233322 37
Q ss_pred CcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC-------C-cccEEEeCCCccc--
Q 013217 170 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------K-YCDVVTTTTHKSL-- 234 (447)
Q Consensus 170 ~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~-------~-~~Di~~~s~~K~l-- 234 (447)
+++|+++.++||+ ..+ +++|.++|+++|+++++|+++. .+...+.....+ . ...+++.|++|.+
T Consensus 149 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 227 (364)
T PRK07865 149 PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNL 227 (364)
T ss_pred ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCccccccccCCccceEEEEeechhccCC
Confidence 8999998788886 444 5788888999999999999964 333322111111 0 1248899999986
Q ss_pred CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcE
Q 013217 235 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 314 (447)
Q Consensus 235 ~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 314 (447)
+|.|+||++.++ ++.+.+.........+. +.....++..++.. ....++..+.+.++++.+.+.|++.|+.
T Consensus 228 ~GlRiG~i~~~~------~~~~~~~~~~~~~~~~~-~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 298 (364)
T PRK07865 228 AGYRAGFVAGDP------ALVAELLEVRKHAGMMV-PAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFR 298 (364)
T ss_pred CceeeEEEecCH------HHHHHHHHHHHhcCCCc-CHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 588899999877 67666654322211222 22222333333322 1223556677788888899999888877
Q ss_pred eeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 315 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
+..+ ..+.++|+.+. .+..++.+.|.++||.+..+...+ +..++++||++.. + ++++++.++.|.
T Consensus 299 ~~~~-~~~~~~~~~~~---~~~~~~~~~l~~~gv~v~pg~~f~---~~~~~~iRi~~~~--~----~~~~~~~~~~l~ 363 (364)
T PRK07865 299 VDHS-EAGLYLWATRG---EDCWDTVAWLAERGILVAPGDFYG---PAGAQHVRVALTA--T----DERIAAAVERLA 363 (364)
T ss_pred ccCC-CccEEEEEeCC---CCHHHHHHHHHHCCEEEeCccccC---cCCCCEEEEEecC--C----HHHHHHHHHHhh
Confidence 6543 33556677653 245677888889999996542211 1124689999753 3 788888887763
No 174
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.88 E-value=3.1e-20 Score=181.77 Aligned_cols=326 Identities=14% Similarity=0.085 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHhhcCeeEecCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC---C
Q 013217 8 VCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL---D 82 (447)
Q Consensus 8 ~~~~~~~e~~~~~~~i~l~~~~n--~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~---~ 82 (447)
+...++++.+..+..++|..+++ +.++.+.+++.+.... .+|+.. .....+.+.+.+++.+.+|. +
T Consensus 9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~~------~G~~~lr~~ia~~~~~~~~~~~~~ 79 (357)
T TIGR03539 9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADA---PGYPQT------WGTPELREAIVDWLERRRGVPGLD 79 (357)
T ss_pred HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhh---CCCCcc------cCCHHHHHHHHHHHHHhcCCCCCC
Confidence 34444555443445578776654 3467788887654321 234332 11234554555677776664 3
Q ss_pred CCccceeeecCCcH-HHHHHHHHHh-cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHH
Q 013217 83 ENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 160 (447)
Q Consensus 83 ~~~~~~~v~~~sGs-~a~~~~~~al-~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~ 160 (447)
++ +|.+|+|+ +++..++..+ ++|||.|++.+|.|.++.. .+...|. +++.+ + |+++
T Consensus 80 ~~----~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v--~------~~~~ 137 (357)
T TIGR03539 80 PT----AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGA--TPVAA--D------DPTE 137 (357)
T ss_pred cC----eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCC--EEecc--C------Chhh
Confidence 44 45568887 7877777777 7999999999998866531 2234443 44443 1 2233
Q ss_pred HHHHhhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--------cccEEE
Q 013217 161 LEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCDVVT 227 (447)
Q Consensus 161 l~~~~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--------~~Di~~ 227 (447)
+. ..++++|+++.++||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+.....+. .-.+++
T Consensus 138 l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~ 212 (357)
T TIGR03539 138 LD----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAV 212 (357)
T ss_pred cC----ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEE
Confidence 22 2378999998888886 454 5678889999999999999963 3332221111110 123788
Q ss_pred eCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 013217 228 TTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 305 (447)
Q Consensus 228 ~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~ 305 (447)
.|++|.+ +|.|+|++++++ ++.+.+......... +++.....++..++.. ....+...+.+.++++.+.
T Consensus 213 ~S~SK~~~~~G~R~G~~i~~~------~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~ 283 (357)
T TIGR03539 213 HSLSKRSNLAGYRAGFVAGDP------ALVAELLTVRKHAGL-MVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLK 283 (357)
T ss_pred eccccccCCCceeEEEEecCH------HHHHHHHHHHhhccc-CCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHH
Confidence 9999985 788999999876 676666543322222 2333333333334421 1223555667778888898
Q ss_pred HHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHH
Q 013217 306 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 306 ~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~ 385 (447)
+.|.+.|+.+..+ ..+.++|+.+.. +..++.+.|.++||.+..+...+ +...+++|+++.. + +++++
T Consensus 284 ~~L~~~g~~~~~p-~~~~~~~~~~~~---~~~~~~~~l~~~gV~v~pg~~f~---~~~~~~iRis~~~--~----~~~i~ 350 (357)
T TIGR03539 284 PALEKAGFRIDHS-EAGLYLWATRGE---DAWDTVDRLAELGILVAPGDFYG---PAGSQHVRVALTA--T----DERIA 350 (357)
T ss_pred HHHHHcCCCCcCC-CccEEEEEECCC---CHHHHHHHHHhCCEEECCccccC---CCCCCeEEEEecC--C----HHHHH
Confidence 9998888775543 345666776532 45678888999999996542211 1124689999753 3 67777
Q ss_pred HHHHHH
Q 013217 386 AIADFI 391 (447)
Q Consensus 386 ~l~~~i 391 (447)
+..+.|
T Consensus 351 ~~~~~l 356 (357)
T TIGR03539 351 AAVARL 356 (357)
T ss_pred HHHHhh
Confidence 766544
No 175
>PRK15029 arginine decarboxylase; Provisional
Probab=99.88 E-value=6.9e-21 Score=196.97 Aligned_cols=298 Identities=15% Similarity=0.087 Sum_probs=204.4
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.+++.++++||++.+.+ .++|| .+|.+++++++++||+|++....|-+.+. .+.++|.....+.-.
T Consensus 209 eAq~~aA~~fgA~~t~F-----lvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~--------al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 209 ESEKYAARVFGADRSWS-----VVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLILTGAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHHhCCCcEEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEeccc
Confidence 56789999999997633 26776 89999999999999999998777666542 345666533322211
Q ss_pred cCCCC---CCCC-----HHHHHHHhhhh---------CCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccc
Q 013217 149 LDEST---GLVD-----YDMLEKTAILF---------RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 210 (447)
Q Consensus 149 ~~~~~---~~id-----~~~l~~~~~~~---------~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~ 210 (447)
.+ +. +.++ ++.+++++..+ +|+++++++|+|-+ +.|+++|+++|+++|++|++|+||++.+
T Consensus 276 ~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 11 22 2345 99999988652 23388888888877 7899999999999999999999998876
Q ss_pred cccccCC--CCC-------Cccc-EEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHH
Q 013217 211 VAASVVA--DPF-------KYCD-VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA 279 (447)
Q Consensus 211 ~~~~~~~--~~~-------~~~D-i~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~ 279 (447)
.+.+..+ +++ .++| +++-|+||+|++... ++|.++.+... --.++++.......+++|++..+|++.
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~--id~~r~~~~l~~~qSTSPSY~LmASLD 432 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGA--INFSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccc--cCHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 5554443 333 3688 999999999998876 78888653100 012455555444446789999999999
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-C------------------------------------------cEee
Q 013217 280 VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G------------------------------------------YKLV 316 (447)
Q Consensus 280 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------------------------------------------~~~~ 316 (447)
+|.+++.....++..++..+.+..+++.+.+. + +.++
T Consensus 433 ~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (755)
T PRK15029 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVM 512 (755)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeee
Confidence 99988765334667788888888898888662 2 2222
Q ss_pred eCC---------------CCCeeEEecCCCCCCCHH---------HHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecC
Q 013217 317 SGG---------------SDNHLVLVDLRPMGIDGA---------RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 372 (447)
Q Consensus 317 ~~~---------------~~~~~~~v~~~~~~~~~~---------~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~ 372 (447)
.++ -|.--+++.++..+.+|. ++.++|+++||.+.... ...+=+
T Consensus 513 ~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~---------~~~vL~--- 580 (755)
T PRK15029 513 HPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQIMF--- 580 (755)
T ss_pred cccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC---------CCeEEE---
Confidence 110 011113344444455666 89999999999996531 112322
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHH
Q 013217 373 AMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 373 ~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+.+.|-++++++++.++|.+.-+
T Consensus 581 -l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 581 -LFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred -EeCCCCCHHHHHHHHHHHHHHHH
Confidence 23334458999999998887633
No 176
>PRK07908 hypothetical protein; Provisional
Probab=99.88 E-value=4.2e-20 Score=180.40 Aligned_cols=316 Identities=14% Similarity=0.142 Sum_probs=205.0
Q ss_pred hhcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH
Q 013217 19 QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 96 (447)
Q Consensus 19 ~~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs 96 (447)
.++.++|..++|. +|+.+++++...+... .+||.. .| ...+ ++.+++++|+++++ |.+|+|+
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~---~g---~~~l----r~aia~~~~~~~~~----I~it~Ga 84 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST---ED---ERRA----RAAVAARHGRTPDE----VLLLAGA 84 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc---cc---hHHH----HHHHHHHhCcChhh----EEECCCH
Confidence 4567899888884 5788899988766431 234432 11 2233 35677788988764 4458887
Q ss_pred -HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 013217 97 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 175 (447)
Q Consensus 97 -~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~ 175 (447)
+++..++. ++|| .+++..|.+.... ..+...|. +++.++++. ++.+|++.+ ++ +++++++
T Consensus 85 ~~al~~~~~--l~~~-~viv~~P~y~~~~--------~~~~~~G~--~i~~v~~~~-~~~~d~~~l----~~-~~~~i~l 145 (349)
T PRK07908 85 AEGFALLAR--LRPR-RAAVVHPSFTEPE--------AALRAAGI--PVHRVVLDP-PFRLDPAAV----PD-DADLVVI 145 (349)
T ss_pred HHHHHHHHh--cCCC-eEEEeCCCChHHH--------HHHHHcCC--EEEeeccCc-ccCcChhHh----cc-CCCEEEE
Confidence 78777666 5775 4556666665432 12334454 666666663 367888854 33 7899999
Q ss_pred cCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCC--CCc-ccEEEeCCCccc--CCCCCceEEeecCC
Q 013217 176 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKY-CDVVTTTTHKSL--RGPRGGMIFFKKDP 248 (447)
Q Consensus 176 ~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~--~~~-~Di~~~s~~K~l--~Gp~gG~i~~~~~~ 248 (447)
++++||+ ..+.++|.++|++ +.++|+|+++. .+... ..++. ... ..+++.|+||++ +|.|.|+++.++
T Consensus 146 ~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~-~~~~~-~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~-- 220 (349)
T PRK07908 146 GNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFA-DAVPG-EPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP-- 220 (349)
T ss_pred cCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcch-hhccC-CccccccccCCCEEEEeecccccCCccceeeeeecCH--
Confidence 8888886 7789999999974 88999999964 22221 11111 111 236678999975 588889999887
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEec
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 328 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~ 328 (447)
++.+.+........ .+....+++...+.......+++..+++.++++.+.+.|.+.|+++..+ +...++|++
T Consensus 221 ----~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~~~~~~ 292 (349)
T PRK07908 221 ----DVLARLTRGRAHWP---VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP-AAAPFVLVR 292 (349)
T ss_pred ----HHHHHHHhcCCCCC---ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCceEEEEE
Confidence 67777765433221 2223333333222211112345667778888888999998888876653 346677887
Q ss_pred CCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 329 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 329 ~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+.. ..++.+.|+++||.+..+... ....+.++|+++. + ++|++++.++|++++.
T Consensus 293 ~~~----~~~~~~~l~~~gI~v~~g~~f---~~~~~~~vRis~~---~----~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 293 VPD----AELLRKRLRERGIAVRRGDTF---PGLDPDYLRLAVR---P----RAEVPVLVQALAEILK 346 (349)
T ss_pred CCc----HHHHHHHHHhCCEEEEECCCC---CCCCCCeEEEEeC---C----CccHHHHHHHHHHHHh
Confidence 652 567888999999999653211 1123568999973 3 7899999999988764
No 177
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.88 E-value=9.1e-21 Score=186.25 Aligned_cols=292 Identities=21% Similarity=0.237 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCccceeeecCCcH-HHHHHHHHHh-cCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 64 IDELETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g--~~~~~~~~~v~~~sGs-~a~~~~~~al-~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
...+++...+++.+-.| .+++ .+|.+++|+ +++..++..+ .++||+|++.+|.|+++.. .+...|
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~---~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~--------~~~~~g 114 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPE---ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE--------AARLLG 114 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGG---EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH--------HHHHTT
T ss_pred hHHHHHHHHHHhhhccCcccccc---eEEEEecccccchhhhhhcccccccccceecCCccccccc--------cccccC
Confidence 45566443334433333 3332 245668998 5555566666 6799999999998876532 334555
Q ss_pred ceeEEEecccC-CCCCCCCHHHHHHHhhhh-----CCcEEEEcCCCCCC--CCChH---HHHHHHHHhCCEEEEehhhhc
Q 013217 140 IYFESMPYRLD-ESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 140 ~~~~~~~~~~~-~~~~~id~~~l~~~~~~~-----~~klii~~~~~~~~--~~~~~---~i~~ia~~~g~~livD~a~~~ 208 (447)
. ++++++++ .+++.+|+++|++.+++. ++++|+++.++||+ ..+.+ +|.++|+++|+++++|++|.
T Consensus 115 ~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~- 191 (363)
T PF00155_consen 115 A--EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYS- 191 (363)
T ss_dssp S--EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTT-
T ss_pred c--eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeecee-
Confidence 5 45555543 256789999999998874 46788888888886 55554 55555999999999999974
Q ss_pred cccccccCC----CCCC-cc-cEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHH
Q 013217 209 GLVAASVVA----DPFK-YC-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAV 280 (447)
Q Consensus 209 g~~~~~~~~----~~~~-~~-Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~ 280 (447)
++...+... ..+. +. .+++.|++|.+ +|.|.|++++++ ++.+.+.....++.. +.....+++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~------~~~~~l~~~~~~~~~---~~~~~~~~~~ 262 (363)
T PF00155_consen 192 DLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP------ELIERLRRFQRSGLS---SSPMQAAAAA 262 (363)
T ss_dssp TGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH------HHHHHHHHHHHHTTS---SHHHHHHHHH
T ss_pred ccccCCCccCcccccccccccceeeeeccccccccccccccccchh------hhhhhhhhccccccc---cchhhHHHHH
Confidence 334332110 0011 22 38889999986 466779999977 777777665433322 2222223333
Q ss_pred HHHHhcC--hhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhc-CeEEccCCCCC
Q 013217 281 CLKHAQS--PEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPG 357 (447)
Q Consensus 281 al~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~ 357 (447)
++..... ...++..+++.++++.+.+.|++.|+.+..+. .+++.|+.+... +..++.+.|.+. ||.+..+..++
T Consensus 263 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~pg~~~~ 339 (363)
T PF00155_consen 263 ALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPE-AGFFLWVRLDPN--DAEELAQELLEEYGILVRPGSYFG 339 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHS-BSSEEEEEESHH--HHHHHHHHHHHHHTEEEEEGGGGT
T ss_pred hhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeecc-CccEEEEEcccc--hHHHHHHHHHHhCCEEEEecCCCC
Confidence 3333221 14577888999999999999999899887653 466667665432 456777767665 99996543332
Q ss_pred CCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 358 DKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 358 ~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
. ++++|+++ +..+ +++++++++.|
T Consensus 340 ~-----~~~iRi~~-a~~~----~e~~~~~~~~l 363 (363)
T PF00155_consen 340 V-----PGYIRISL-ASHS----EEDLEEALERL 363 (363)
T ss_dssp S-----TTEEEEEG-GCSC----HHHHHHHHHHH
T ss_pred C-----CCEEEEEe-ccCC----HHHHHHHHhhC
Confidence 2 66899998 5555 89999998865
No 178
>PLN02672 methionine S-methyltransferase
Probab=99.88 E-value=2.6e-20 Score=198.15 Aligned_cols=334 Identities=13% Similarity=0.094 Sum_probs=213.2
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
...|.|..++|. +|+.+++++.+.+.+ +. + +++.. .+.+..++++++.+|.+.+.. -+|.+++|+
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~-~~--~----s~g~p----dlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~ 764 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVR-QN--I----SESET----DPRPSILQFIKSNYGFPTDSC-TEFVYGDTSL 764 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhh-cC--C----CCCCh----HHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence 356899999995 578999998876543 11 1 11111 123345578888889875310 134568888
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 175 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~klii~ 175 (447)
+++..++.++++|||+|++++|.|+.+.. .+...|. +++.+++++ +++.+|++++++++++.+.++|++
T Consensus 765 elL~lll~aLl~pGD~VLVp~PtY~~Y~~--------~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L 834 (1082)
T PLN02672 765 ALFNKLVLCCVQEGGTLCFPAGSNGTYVS--------AAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYI 834 (1082)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEEEE
Confidence 67777889999999999999998876542 3345565 555555653 467899999999986533456666
Q ss_pred cCCC-CCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCC--CCC-------Cc-----ccEEEeCCCccc-
Q 013217 176 GASA-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-------KY-----CDVVTTTTHKSL- 234 (447)
Q Consensus 176 ~~~~-~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~--~~~-------~~-----~Di~~~s~~K~l- 234 (447)
+.|+ ||+ .. .+++|.++|++||++||+|+++ .++.+.+... .++ .. .-+++.|++|.+
T Consensus 835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaY-sdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSF-SGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCC-CccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 6565 776 33 4678888999999999999996 5444432110 001 00 125778999864
Q ss_pred -CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhc--C----hhHHHHHHHHHHHHHHHHHH
Q 013217 235 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--S----PEFKVYQNKVVSNCRALASR 307 (447)
Q Consensus 235 -~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~--~----~~~~~~~~~~~~~~~~l~~~ 307 (447)
+|.|.||++++++ ++.+.+.... ...+.....+.++ ..++.... . ...++..+.+.++++.+.+.
T Consensus 914 lpGLRIGylIap~~-----eLi~~l~~~~--~~s~~~~~~q~Aa-aaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~ 985 (1082)
T PLN02672 914 SGGHEFGFLALNDS-----VLIDAFHSAP--GLSRPHSTLKYTI-KKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKET 985 (1082)
T ss_pred cHHHHheeEEeCCH-----HHHHHHHHhh--hhcCCCcHHHHHH-HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6889999999763 4777765531 1111112222222 22222111 1 12355667788999999999
Q ss_pred HHHCCcEeeeCCCCCeeEEecCCC----------------CCCCHHHHHHHHh-hcCeEEccCCCCCCCCCCCCCeEEEe
Q 013217 308 LVELGYKLVSGGSDNHLVLVDLRP----------------MGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIG 370 (447)
Q Consensus 308 L~~~g~~~~~~~~~~~~~~v~~~~----------------~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig 370 (447)
|.+.|+.+..+ ..++++|+++.. .+.+..++.+.|. +.||.++.+...+ .++++|++
T Consensus 986 L~~~Gi~v~~P-eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG-----~~g~~RIs 1059 (1082)
T PLN02672 986 LEACGWDVLEP-QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTG-----IPGYCRFS 1059 (1082)
T ss_pred HHHCCCeEecC-CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccC-----CCCeEEEE
Confidence 99989876553 456777776531 0245667777664 5799996542211 24689998
Q ss_pred cCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 371 SPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 371 ~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+.. + ++++++..+.|++.+.
T Consensus 1060 fa~--~----~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1060 FAL--E----DSEFDRALKAIARFKE 1079 (1082)
T ss_pred ecC--C----HHHHHHHHHHHHHHHH
Confidence 642 3 7888888888877554
No 179
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.88 E-value=2e-20 Score=187.65 Aligned_cols=307 Identities=16% Similarity=0.163 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHcCC---CCCccceeeecCCcH-HHHHHHHHH-----hcCCCCEEEEecCCCCcccCCCcccccccc
Q 013217 65 DELETLCQKRALAAFNL---DENKWGVNVQPLSGS-PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRV 135 (447)
Q Consensus 65 ~~le~~~~~~~~~~~g~---~~~~~~~~v~~~sGs-~a~~~~~~a-----l~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~ 135 (447)
...|+.+.+++.+.++. +.++ .+|.+++|+ +|+..++.+ +++|||+|++++|.|+.+.. .+
T Consensus 132 ~~~e~iv~~y~~~~~~~~~~~~~~--~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~ 201 (521)
T TIGR03801 132 PHSEKIVHQYLIQEMCGNKPPPGE--FDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IP 201 (521)
T ss_pred HHHHHHHHHHHHhhccCCCCCCCc--CeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HH
Confidence 45555555666665442 2221 145568887 888888776 78999999999998876532 22
Q ss_pred ccccceeEEEecccCCC-C-----CCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHh--CCEEEE
Q 013217 136 SGTSIYFESMPYRLDES-T-----GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAV--GALLMM 202 (447)
Q Consensus 136 ~~~g~~~~~~~~~~~~~-~-----~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~--g~~liv 202 (447)
.+.+.+.++++++.++. . +.+|++++++++++ ++|+|+++.|+||+ ..+ +++|.++|++| ++++|+
T Consensus 202 ~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~ 280 (521)
T TIGR03801 202 ELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILT 280 (521)
T ss_pred HHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 33433456666666432 2 78999999998776 89999988888886 444 67888889987 999999
Q ss_pred ehhhhccccccccCCCCC---CcccEEEeCCCccc--CCCCCceEEeecCCc---ch----hhHHHHhh-----------
Q 013217 203 DMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRGGMIFFKKDPV---LG----VELESAIN----------- 259 (447)
Q Consensus 203 D~a~~~g~~~~~~~~~~~---~~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~---~~----~~~~~~i~----------- 259 (447)
|+++. .+.. + ..+.+ +..-+++.|++|++ +|+|.|+++.+++.. .. .+..+.+.
T Consensus 281 DEvY~-~f~~-~-~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~ 357 (521)
T TIGR03801 281 DDVYG-TFVD-D-FRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPR 357 (521)
T ss_pred CCCch-hhcc-c-ccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChh
Confidence 99964 3332 1 11111 12348889999986 689999999876300 00 00111110
Q ss_pred -------------hccCCCCC--CCCcHHHHH--HHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeee-CCCC
Q 013217 260 -------------NAVFPGLQ--GGPHNHTIG--GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSD 321 (447)
Q Consensus 260 -------------~~~~~~~~--g~p~~~~~a--al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~ 321 (447)
........ ++|...+++ ++..+++. .....++..+.+.++.+.+.+.| |+.+.. ++..
T Consensus 358 ~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~-~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g 433 (521)
T TIGR03801 358 KLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK-ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDV 433 (521)
T ss_pred hhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCe
Confidence 00001111 233223333 33333332 11223555666777777777776 654322 2234
Q ss_pred CeeEEecCCCCC---------------CCHHH-HHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHH
Q 013217 322 NHLVLVDLRPMG---------------IDGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 322 ~~~~~v~~~~~~---------------~~~~~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~ 385 (447)
.+++++|+...+ .+..+ +.+++++.||.+ +||........++|+++... +++++.
T Consensus 434 ~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v----~PG~~Fg~~~~~vRisla~l-----~~~~~~ 504 (521)
T TIGR03801 434 AYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVL----LPGGGFGGPEWSVRVSLANL-----NEYDYA 504 (521)
T ss_pred EEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEE----eCchhcCCCCCeEEEEecCC-----CHHHHH
Confidence 577788886321 12334 445667899998 55554211245799997422 378999
Q ss_pred HHHHHHHHHHHHH
Q 013217 386 AIADFIHEGVEIT 398 (447)
Q Consensus 386 ~l~~~i~~~l~~~ 398 (447)
++.+.|.+.+..+
T Consensus 505 ~~~~rl~~~~~~~ 517 (521)
T TIGR03801 505 EIGRAIRKILDEY 517 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888765
No 180
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=4.9e-20 Score=184.43 Aligned_cols=345 Identities=15% Similarity=0.124 Sum_probs=211.0
Q ss_pred CeeEecCCCCCC-HHHHHHHhhhhhc-----cCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC----CCCCccceeee
Q 013217 22 SLELIASENFTS-RAVMEAVGSCLTN-----KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQ 91 (447)
Q Consensus 22 ~i~l~~~~n~~~-~~v~~a~~~~~~~-----~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g----~~~~~~~~~v~ 91 (447)
.|+|--.||.+. ..+.+.+.+...- .+........+|.+......+.+...+.+.+.+| ++++ +|.
T Consensus 49 ~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~Iv 124 (447)
T PLN02607 49 VIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RIV 124 (447)
T ss_pred eEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----HeE
Confidence 489989999764 3444455443210 0000000112233333344565555567777766 3454 445
Q ss_pred cCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccc-cccceeEEEecccCC-CCCCCCHHHHHHHhhh-
Q 013217 92 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL- 167 (447)
Q Consensus 92 ~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~- 167 (447)
+|+|+ +|+..++.+++.|||.|+++.|.|+++.. .+. ..| .+++++++++ +++.+|++++++++++
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g--~~vv~v~~~~~~~f~~~~~~le~a~~~a 194 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTG--VKIVPIHCDSSNNFQVTPQALEAAYQEA 194 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--cEEEEEeCCCCCCCcCCHHHHHHHHHHH
Confidence 58887 88888889999999999999998877632 122 233 3566666654 3457999999998864
Q ss_pred ----hCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CCCC------C-----CcccEE
Q 013217 168 ----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP------F-----KYCDVV 226 (447)
Q Consensus 168 ----~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~------~-----~~~Di~ 226 (447)
.++|+|+++.|+||+ +.+ +++|.++|+++|+++|+|+++ ++.++.+. ..+. . +..-++
T Consensus 195 ~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiY-a~~~f~~~~f~S~~s~~~~~~~~~~~~~v~v 273 (447)
T PLN02607 195 EAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIY-SGSVFSASEFVSVAEIVEARGYKGVAERVHI 273 (447)
T ss_pred HHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcccHHHHHhhcCCCCCcCcEEE
Confidence 378999998888886 444 678889999999999999995 44333221 1110 0 111267
Q ss_pred EeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHh--cChhHHHHHHHHHHHHH
Q 013217 227 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNCR 302 (447)
Q Consensus 227 ~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~--~~~~~~~~~~~~~~~~~ 302 (447)
+.|++|.| +|.|.|++++.++ ++...+....... .++.....+++..+..- ......+..+++.++.+
T Consensus 274 i~s~SK~fg~~GlRvG~ivs~n~-----~l~~~~~~~~~~~---~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~ 345 (447)
T PLN02607 274 VYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRMSSFT---LVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYE 345 (447)
T ss_pred EEcchhcCCCCcceEEEEEEcCH-----HHHHHHHHHhhcC---CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH
Confidence 78999986 6788899998542 5655554432111 11222222222222210 00112345566777888
Q ss_pred HHHHHHHHCCcEeeeCCCCCeeEEecCCCC---C-CC-HHHHH-HHHhhcCeEEccCCCCCCCCCCCCCeEEEecCcccc
Q 013217 303 ALASRLVELGYKLVSGGSDNHLVLVDLRPM---G-ID-GARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 376 (447)
Q Consensus 303 ~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~---~-~~-~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~ 376 (447)
.+.+.|++.|+++..+ ....++|++++.. . .+ ..++. +.++++||.+.++... ....++.+|+++...
T Consensus 346 ~~~~~L~~~gi~~~~~-~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f---~~~~~g~fRi~fa~~-- 419 (447)
T PLN02607 346 MIVQGLRRAGIECLKG-NAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSC---HCSEPGWFRVCFANM-- 419 (447)
T ss_pred HHHHHHHhCCCCcccC-CeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCcccc---CCCCCCEEEEEeccC--
Confidence 8899999888876543 3467789988531 0 11 23444 4456689999643221 122367899987532
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 013217 377 RGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 377 ~g~~~~di~~l~~~i~~~l~~~ 398 (447)
.++++++..+.|.+++...
T Consensus 420 ---~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 420 ---SEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred ---CHHHHHHHHHHHHHHHHHH
Confidence 2788888888888888754
No 181
>PRK05968 hypothetical protein; Provisional
Probab=99.88 E-value=5.5e-21 Score=188.31 Aligned_cols=289 Identities=17% Similarity=0.134 Sum_probs=187.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +++++++|.+.. +.++||+.|+..++.++++|||+|++..+.|++.+.... ..+...|
T Consensus 61 ~~p~~~~le----~~lA~l~g~~~a-----v~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G 127 (389)
T PRK05968 61 DNPTVRAFE----EMLAKLEGAEDA-----RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFE----TILKRMG 127 (389)
T ss_pred CChhHHHHH----HHHHHHhCCCcE-----EEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcC
Confidence 345567777 578899998752 445899999999999999999999999988876532110 1122334
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++. .|++++++++ + +||+|++.++.++. ..|+++|.++|+++|+++++|++|+.+...
T Consensus 128 ~--~v~~vd~------~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~----- 192 (389)
T PRK05968 128 V--EVDYVDG------RDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ----- 192 (389)
T ss_pred c--eEEEeCC------CCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc-----
Confidence 3 4444322 3889999887 4 78999998666664 579999999999999999999998665422
Q ss_pred CCCC-cccEEEeCCCcccCCC---CCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp---~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|+||+++|| +||+++.++ ++.+++.....+...+..+.. .+++ .++.+. .+..+
T Consensus 193 ~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~------~~~~~l~~~~~~~~g~~~~~~-~A~~--~l~~L~--tl~~r 261 (389)
T PRK05968 193 RPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK------EHIARINAEAYPYLGAKLSPF-EAWL--LLRGLR--TLPLR 261 (389)
T ss_pred CchhcCCcEEEeeccccccCCCCeEEEEEEECH------HHHHHHHHHHHHhCCCCCChH-HHHH--HHcccC--cHHHH
Confidence 2333 5899999999999886 458888776 666666543222221222322 2221 233333 35778
Q ss_pred HHHHHHHHHHHHHHHHH-CCcEeee-CCCCC----------eeEEecCCCCCCCHHHHHHHHhhcCeEEccCCC-----C
Q 013217 294 QNKVVSNCRALASRLVE-LGYKLVS-GGSDN----------HLVLVDLRPMGIDGARVEKILDMASITLNKNSV-----P 356 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~----------~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~-----p 356 (447)
+++..++++.+++.|++ +++..+. ++..+ .++.+++.. +.+..++.+.|+..++.++.+.. |
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~G~~~slv~p 340 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSWGGHESLVVP 340 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCCCCCCceeee
Confidence 89999999999999988 4564443 32111 134445432 33456677777777777775421 3
Q ss_pred CCC-------------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 357 GDK-------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 357 ~~~-------------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
... .....+-||+|.+.. +.+.|.+-|+++|.
T Consensus 341 ~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--------~~~dl~~dl~~al~ 385 (389)
T PRK05968 341 AEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--------GTEALWADLEQALA 385 (389)
T ss_pred CcccccccCCHHHHHhcCCCCCeEEEEeccC--------CHHHHHHHHHHHHH
Confidence 211 011245699998754 44555555566555
No 182
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.88 E-value=4.3e-21 Score=189.09 Aligned_cols=291 Identities=15% Similarity=0.134 Sum_probs=186.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +.+++++|.+. .+.++||+.|+.+++.++++|||+|++..+.|++.+.... ......|
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~----~~~~~~g 125 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLE----VLEEKFM 125 (386)
T ss_pred CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH----HHHhhcC
Confidence 445567777 58899999764 3556899999999999999999999999887776532110 0000112
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
+++... ...|++++++++++ +|++|++++++||+ ..|+++|.++|+++|+++++|++++.+...
T Consensus 126 --i~~~~~------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~----- 191 (386)
T PRK06767 126 --ITHSFC------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQ----- 191 (386)
T ss_pred --eEEEEe------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccC-----
Confidence 222221 12589999999877 89999999888876 789999999999999999999998654332
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|++|+++|+. ||++++++ +..+++.........+..+... ++ .+++.+. ....+
T Consensus 192 ~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~------~~i~~~~~~~~~~~g~~~~~~~-a~--l~~~~L~--tl~~r 260 (386)
T PRK06767 192 RPLELGCDAVVHSATKYIGGHGDVVAGVTICKT------RALAEKIRPMRKDIGGIMAPFD-AW--LLLRGLK--TLAVR 260 (386)
T ss_pred CchhcCCcEEEecCcceecCCCCceeEEEEeCh------HHHHHHHHHHHHHhCCCCCHHH-HH--HHHcCCC--cHHHH
Confidence 2333 68999999999998765 69999887 4444332111111112222221 22 2333332 24567
Q ss_pred HHHHHHHHHHHHHHHHH-CCcEeee-CCC---------CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCC------CC
Q 013217 294 QNKVVSNCRALASRLVE-LGYKLVS-GGS---------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS------VP 356 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~-~g~~~~~-~~~---------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~------~p 356 (447)
+++..+++..+++.|++ ++++.+. +.. .+.++.+++.....+...+.+.|+..++.++.+. .|
T Consensus 261 ~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 340 (386)
T PRK06767 261 MDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHP 340 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCC
Confidence 88999999999999998 5776433 211 1224445553211234567777777788777642 13
Q ss_pred CCC-----C-------CCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 357 GDK-----S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 357 ~~~-----~-------~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
... . ...++-||+|.+ -||.+.+.+-|.+++.
T Consensus 341 ~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~ 384 (386)
T PRK06767 341 ATMTHAAIPAELRQEMGIYDNLIRLSVG--------LESWEDIVSDLEQALK 384 (386)
T ss_pred CccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 211 0 012345888876 4566667766666654
No 183
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.88 E-value=9.3e-21 Score=186.67 Aligned_cols=225 Identities=19% Similarity=0.176 Sum_probs=155.5
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
+|...|| +++....+| +++++++|.+. .+.++||+.|+..++.++++|||+|++..+.|++.+....
T Consensus 50 ~~~y~r~--~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~-- 116 (391)
T TIGR01328 50 GYIYSRL--GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLE-- 116 (391)
T ss_pred CCceeCC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHH--
Confidence 4444443 445677887 58999999876 3456899999999999999999999999988776532110
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
..+...|. ++..++.+ |++++++++++ +|++|+++.++||. ..|+++|.++|+++|+++++|+++..
T Consensus 117 --~~~~~~G~--~~~~vd~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 117 --HALTKFGI--QVDFINMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred --HHHhcCCe--EEEEECCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCch
Confidence 11122343 44443332 78999999877 89999998777775 77999999999999999999999876
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
+... .|+. ++|++++|++|+++|+. ||+++.++ ++.+++.........|+......+++ +++.
T Consensus 186 ~~~~-----~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~------~li~~l~~~~~~~~~g~~l~~~~a~l--~l~~ 252 (391)
T TIGR01328 186 PMLT-----NPVALGVDVVVHSATKYIGGHGDVVAGLICGKA------ELLQQIRMVGIKDMTGSVISPFDAWL--ILRG 252 (391)
T ss_pred hccC-----CchhcCCCEEEccccccccCCCCceEEEEEcCH------HHHHHHHHHHHHhCCCCCCCcHHHHH--HHhC
Confidence 5432 2333 68999999999998654 58887776 66665553211111122122222222 3333
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHH-CCcE
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
+. .+..++++..+|++.+++.|++ +++.
T Consensus 253 L~--tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 253 LK--TLNIRMKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred cC--cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 32 3566789999999999999988 4443
No 184
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.4e-20 Score=182.91 Aligned_cols=284 Identities=15% Similarity=0.094 Sum_probs=185.9
Q ss_pred HHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCC-CEEEEecCCCCcccCCCccccccccccccceeEEEeccc
Q 013217 72 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 149 (447)
Q Consensus 72 ~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 149 (447)
++.+++++|++++ +|.+++|+ +++..++.+++++| |+|++.+|.++.+. ......|. +++++++
T Consensus 65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~ 130 (364)
T PRK04781 65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA--------VCARLQNA--PLVEVPL 130 (364)
T ss_pred HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEec
Confidence 3567788898875 45568887 88888999999999 79999888654331 11233454 5555555
Q ss_pred CC--CCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHH--hCCEEEEehhhhccccccccCCCCCCc-
Q 013217 150 DE--STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFKY- 222 (447)
Q Consensus 150 ~~--~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~--~g~~livD~a~~~g~~~~~~~~~~~~~- 222 (447)
+. +++.+|++++.+.+...++++|++++++||+ ..+.+++.++++. .++++|+|+++. .+.........++.
T Consensus 131 ~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~-~f~~~~~~~~~~~~~ 209 (364)
T PRK04781 131 VDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG-EFSDVPSAVGLLARY 209 (364)
T ss_pred CCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch-hhcCCcchHHHHhhC
Confidence 32 2356899998765544489999998888886 7788888887765 378999999953 33321100000111
Q ss_pred -ccEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 013217 223 -CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 299 (447)
Q Consensus 223 -~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~ 299 (447)
.-+++.|++|++ +|.|.||++.++ ++.+.+.+...+.. .....+.++. .++.........+..+++.+
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~------~l~~~l~~~~~~~~--~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~ 280 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANA------ELIAVLRRCQAPYP--VPTPCAALAE-QALSAPALAVTARRVAEVRA 280 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCH------HHHHHHHhccCCCC--CCHHHHHHHH-HHHhcccHHHHHHHHHHHHH
Confidence 237889999986 589999999987 78887776544332 1122222222 23332111123455667788
Q ss_pred HHHHHHHHHHHC-CcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCC
Q 013217 300 NCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 378 (447)
Q Consensus 300 ~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g 378 (447)
+++.+.+.|++. |+..+.+ +...++|+.+. +..++.+.|.++||.+..+. ..+...+++||++. +
T Consensus 281 ~r~~l~~~L~~~~~~~~~~p-~~g~f~~~~~~----~~~~~~~~l~~~gI~v~~~~----~~~~~~~~~Ris~~---~-- 346 (364)
T PRK04781 281 ERERLHAALAQLPGVRRVYP-SQGNFLLVRFD----DAEAAFQALLAAGVVVRDQR----AAPRLSDALRITLG---T-- 346 (364)
T ss_pred HHHHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEeeCC----CCCCCCCeEEEeCC---C--
Confidence 888999999885 6542333 33456788764 35778888999999997542 11112468999865 3
Q ss_pred CCHHHHHHHHHHHHHHH
Q 013217 379 FSEKEFVAIADFIHEGV 395 (447)
Q Consensus 379 ~~~~di~~l~~~i~~~l 395 (447)
+++++++.++|++..
T Consensus 347 --~~~~~~l~~al~~~~ 361 (364)
T PRK04781 347 --PEQNDRVLAALQRTQ 361 (364)
T ss_pred --HHHHHHHHHHHHHHH
Confidence 899999999997643
No 185
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=5.4e-20 Score=179.79 Aligned_cols=315 Identities=15% Similarity=0.118 Sum_probs=204.0
Q ss_pred CeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HH
Q 013217 22 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 98 (447)
Q Consensus 22 ~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a 98 (447)
.++|..++|. .|+.+.+++.+.+.. ..+||.. . ..++ ++.++++++++++ +|.+++|+ ++
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~~------~-~~~l----r~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPDP------D-YLEL----RKRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCCc------c-HHHH----HHHHHHHhCCChh----hEEECCCHHHH
Confidence 4788888775 478899998876532 2234321 1 2233 3567778898876 45568998 78
Q ss_pred HHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 99 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 99 ~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
+..++.++ .+ ++|++.+|.|+.+.. .+...|. +++.++++.+ ++.+| +++.+.+.. ++++|+++.
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~ 149 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYER--------ALKAFDA--EIEYAELTEETNFAAN-EIVLEEIKE-EIDLVFLCN 149 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHHH--------HHHHcCC--eeEEEeCccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence 88777775 44 689999988765431 2233454 4555556533 45788 666666655 799998888
Q ss_pred CCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---Cc--ccEEEeCCCccc--CCCCCceEEee
Q 013217 178 SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRGGMIFFK 245 (447)
Q Consensus 178 ~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~~--~Di~~~s~~K~l--~Gp~gG~i~~~ 245 (447)
|+||+ ..+ +++|.++|+++|+++++|+++ ..+...+...+++ +. --+++.|++|++ +|.|.||++.+
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAF-MDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcc-cccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence 88886 444 678888899999999999995 4544433211111 11 227789999986 68888999886
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCe
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNH 323 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 323 (447)
++ .+.+.+.....+. +.+.....+...++. ...+ ++..+.+.++++.+.+.|.+. |+.+..+ ...
T Consensus 229 ~~-----~~~~~~~~~~~~~---~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~ 295 (354)
T PRK06358 229 NK-----NLAEKLLQMREPW---SINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP--SVN 295 (354)
T ss_pred CH-----HHHHHHHHhCCCC---cchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--cce
Confidence 42 5666666543321 222222222222332 2233 666777888889999999874 7665543 234
Q ss_pred eEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 324 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
++|+.+.+ ..++.+.|.++||.+..+... ....+++||++.. + .++++++.+++.+++
T Consensus 296 f~~~~~~~----~~~~~~~l~~~gI~v~~~~~f---~~~~~~~iRls~~---~----~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 296 FIFFKLEK----PIDLRKELLKKGILIRSCSNY---RGLDENYYRVAVK---S----REDNKKLLKALEVIL 353 (354)
T ss_pred EEEEEcCc----hHHHHHHHHHCCeEEEECCCC---CCCCCCEEEEEeC---C----HHHHHHHHHHHHHHh
Confidence 66777642 367888888899999654211 1223467999854 3 899999999998764
No 186
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.88 E-value=6.3e-20 Score=191.24 Aligned_cols=297 Identities=20% Similarity=0.235 Sum_probs=194.2
Q ss_pred HHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC-------C-CCEEEEecCCCCcccCCCccccccccccccceeE
Q 013217 72 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-------P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 143 (447)
Q Consensus 72 ~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~-------p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 143 (447)
++++++++|.+. +.+++.||+++++++++++.. + .++|+++...|+.+.. .....| ++
T Consensus 549 q~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--------sa~~~G--ie 614 (954)
T PRK12566 549 EAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--------SAQMAG--MR 614 (954)
T ss_pred HHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--------HHHHCC--CE
Confidence 379999999997 588999999999888888642 3 3577887777766532 122334 46
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhhCCc--EEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCC
Q 013217 144 SMPYRLDESTGLVDYDMLEKTAILFRPK--LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 219 (447)
Q Consensus 144 ~~~~~~~~~~~~id~~~l~~~~~~~~~k--lii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~ 219 (447)
++.++.| ++|.+|+++|++++++++++ +|.+..+++.+ ..++++|+++||++|+++++|++|..++... ..|
T Consensus 615 Vv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l---~~P 690 (954)
T PRK12566 615 VVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL---ARP 690 (954)
T ss_pred EEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC---CCh
Confidence 6676676 47899999999999744444 45555555554 4569999999999999999999997665432 222
Q ss_pred CC-cccEEEeCCCcccCCCCC-ceEE-----eecCCcchhhHHHHhhhcc---CCC---CCCCC----cHH-HHHHHHHH
Q 013217 220 FK-YCDVVTTTTHKSLRGPRG-GMIF-----FKKDPVLGVELESAINNAV---FPG---LQGGP----HNH-TIGGLAVC 281 (447)
Q Consensus 220 ~~-~~Di~~~s~~K~l~Gp~g-G~i~-----~~~~~~~~~~~~~~i~~~~---~~~---~~g~p----~~~-~~aal~~a 281 (447)
-. ++|++++++||||++|+| |..+ +++ .+...+...- ..+ ..|+. ... .++..+.+
T Consensus 691 g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~------~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~ 764 (954)
T PRK12566 691 ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRA------HLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWM 764 (954)
T ss_pred hhcCCCEEEecCCcccCcCccCCCCccchhhhhh------hhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHH
Confidence 22 699999999999988876 4433 333 2333222210 000 01211 111 12222222
Q ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC-CC--eeEEecCCC----CCCCHHHHHHHHhhcCeEEccCC
Q 013217 282 LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS-DN--HLVLVDLRP----MGIDGARVEKILDMASITLNKNS 354 (447)
Q Consensus 282 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~--~~~~v~~~~----~~~~~~~~~~~L~~~gI~v~~~~ 354 (447)
+-.+...+.++.......++++++++|.+ ++.+...+. .. |-+.+++.+ .+.+..++.++|.++||......
T Consensus 765 Yi~~lG~eLk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~ 843 (954)
T PRK12566 765 YIAMMGPQLADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMS 843 (954)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEe
Confidence 21122222444444557799999999977 555544321 12 445566542 24667789999989999864422
Q ss_pred CCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 013217 355 VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK 403 (447)
Q Consensus 355 ~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~~~~ 403 (447)
.| ..+.+|++.+.+++ ++|+|++++++..+.....+++.
T Consensus 844 fP------v~~~LmIepTE~es----keEIDrf~eAL~~I~~e~~~v~~ 882 (954)
T PRK12566 844 FP------VPGTLMVEPTESES----KAELDRFVEAMLSIRAEIGKVQE 882 (954)
T ss_pred ec------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHHHc
Confidence 23 25689999999998 99999999999998887766543
No 187
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=1.8e-20 Score=173.31 Aligned_cols=319 Identities=18% Similarity=0.154 Sum_probs=204.2
Q ss_pred cCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHH
Q 013217 27 ASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 104 (447)
Q Consensus 27 ~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~ 104 (447)
.|.|.. .|+++++|...-. .+..-||..++...+| ++++++||... .+.++|||+||..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 567754 7999999975321 2233467778888888 68899999843 3445999999999999
Q ss_pred HhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhh------CCcEEEEcC
Q 013217 105 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF------RPKLIIAGA 177 (447)
Q Consensus 105 al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~------~~klii~~~ 177 (447)
+.++||+.|++....|--....+ ...+.+.. .++...+ .+|.+++|+|++.+... +|.+++.+.
T Consensus 69 ~~~~~~~~vi~~~~aHi~~~E~G------a~~~~~~~---~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 69 AHCQPGESVICHETAHIYTDECG------APEFFGGG---QKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred HhcCCCCeEEEeccccceecccC------cHHHHcCC---ceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeec
Confidence 99999999998875553222222 23333321 2233333 57899999999977631 345666664
Q ss_pred CCC-CCCCC---hHHHHHHHHHhCCEEEEehhhhcccc-ccccCCCCC-CcccEEEeCCCcccCCCCCceEEeecCCcch
Q 013217 178 SAY-PRDFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 251 (447)
Q Consensus 178 ~~~-~~~~~---~~~i~~ia~~~g~~livD~a~~~g~~-~~~~~~~~~-~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~ 251 (447)
++. ++..+ +++|.++|+++|++|+.|+|...... ..+.....+ .++|+++++++|.++.|-|++++.+.
T Consensus 140 ~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~----- 214 (342)
T COG2008 140 ATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR----- 214 (342)
T ss_pred cCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH-----
Confidence 443 33444 57888899999999999999754332 223111112 27999999999998888888888887
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH--HHHHHHHHHH-CCcEeeeCCCCCeeEEec
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN--CRALASRLVE-LGYKLVSGGSDNHLVLVD 328 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~--~~~l~~~L~~-~g~~~~~~~~~~~~~~v~ 328 (447)
++.++.+.......+ .+...--++++.....+.+. -+.....+| ++.|++.|.+ +|+++..+ ++++.++++
T Consensus 215 -~~~~~a~~~rK~~Gg---l~~k~r~laA~~~~~l~~~~-~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~ 288 (342)
T COG2008 215 -DFAKRARRWRKRAGG---LMRKARFLAAQGLYALEDDV-WRLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVR 288 (342)
T ss_pred -HHHHHHHHHHHHhcc---cHhhhhHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEEE
Confidence 677766543221111 11111112223333333332 123444566 8899999985 69999876 567777887
Q ss_pred CCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 329 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 329 ~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
++...++......++...|+..... ...+|+-|+.-++ ++|++++++.++.++
T Consensus 289 l~~~~i~~l~~~~~~~~~~~~~~~~----------~~~vRfvts~a~~----~edv~~~~~~~~~~~ 341 (342)
T COG2008 289 LPESAIEALRLAGALFYRGVLIGAH----------GEIVRFVTSWATS----EEDVDELVAAIKALL 341 (342)
T ss_pred CChHHHHHHHhhchhheeeeeccCC----------CceEEEEeeccCC----HHHHHHHHHHHHHhh
Confidence 7643333333444445555554211 0259998887777 999999999887653
No 188
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=7.6e-20 Score=180.06 Aligned_cols=336 Identities=15% Similarity=0.119 Sum_probs=203.0
Q ss_pred HHHHHHHHHHH-hhcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--C
Q 013217 8 VCEIITKEKER-QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--D 82 (447)
Q Consensus 8 ~~~~~~~e~~~-~~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~ 82 (447)
+.++....... -+..++|..+++. .++.+.+++...... ...|+.. .....+.+...+++++.+|. +
T Consensus 11 ~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~------~G~~~lr~aia~~l~~~~g~~~~ 82 (374)
T PRK05839 11 LRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKS------AGEESLREAQRGFFKRRFKIELK 82 (374)
T ss_pred HHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCC------CCCHHHHHHHHHHHHHHhCCCCC
Confidence 34455433332 2366788777764 467788887654321 2234332 12234544555677777774 4
Q ss_pred CCccceeeecCCcH-HHHHHHHHHhc--CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCH
Q 013217 83 ENKWGVNVQPLSGS-PANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDY 158 (447)
Q Consensus 83 ~~~~~~~v~~~sGs-~a~~~~~~al~--~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~ 158 (447)
++ +|.+|+|+ +++..++.+++ ++||.|++.+|.|+.+.. .+...|. ++++++.+++ ++.+|.
T Consensus 83 ~~----~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~ 148 (374)
T PRK05839 83 EN----ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEG--------AAIASRA--KVLLMPLTKENDFTPSL 148 (374)
T ss_pred cc----eEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHH--------HHHhcCC--EEEEeecccccCCcCCc
Confidence 54 56679998 67777777764 589999999988766532 2234454 6666666533 456666
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----------cc
Q 013217 159 DMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----------YC 223 (447)
Q Consensus 159 ~~l~~~~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----------~~ 223 (447)
++.+ + + ++|+|+++.++||+ ..+ +++|.++|+++|+++++|+++. .+...+..++.+. .-
T Consensus 149 ~~~~--~-~-~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~-~~~~~~~~~s~~~~~~~~~~~~~~~ 223 (374)
T PRK05839 149 NEKE--L-Q-EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYS-EIYENTPPPSLLEASILVGNESFKN 223 (374)
T ss_pred chhh--h-c-cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchh-hcccCCCCCCHhhhhcccCccccCc
Confidence 5442 2 3 69999999889986 444 5778888999999999999953 3332211111110 12
Q ss_pred cEEEeCCCcc--cCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q 013217 224 DVVTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 301 (447)
Q Consensus 224 Di~~~s~~K~--l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~ 301 (447)
-+++.|++|. ++|.|.||++.++ ++.+++.........+.+...+.++ ..++. .....++..+++.+++
T Consensus 224 vi~~~SfSK~~~~~GlRiG~ii~~~------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~--~~~~~~~~~~~~~~~~ 294 (374)
T PRK05839 224 VLVINSISKRSSAPGLRSGFIAGDA------SILKKYKAYRTYLGCASPLPLQKAA-AVAWL--DDEHAEFFRNIYAKNL 294 (374)
T ss_pred EEEEeccccccCCccceeEEEecCH------HHHHHHHHHHhhcCCCCChHHHHHH-HHHhc--cchHHHHHHHHHHHHH
Confidence 2788999997 4788999999976 6777665542211123333333332 22332 1223456666777777
Q ss_pred HHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCC
Q 013217 302 RALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 380 (447)
Q Consensus 302 ~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~ 380 (447)
+.+.+.| |+. . +....++|+++. +..++.+.| +++||.+..+...+. ....++++|+++.. +
T Consensus 295 ~~~~~~l---~~~-~--p~gg~fi~~~~~----~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~~~iRis~~~--~---- 357 (374)
T PRK05839 295 KLAREIL---GIT-I--PPATFYVWLPVD----NDEEFTKKLYQNEGIKVLPGSFLGR-NGIGKGYVRIALVY--D---- 357 (374)
T ss_pred HHHHHhc---CCC-C--CCeeEEEEEeCC----ChHHHHHHHHHHCCEEEeCchhhCC-CCCCCCeEEEEecC--C----
Confidence 7666654 443 2 234667788875 245666666 569999965422211 11124789999742 3
Q ss_pred HHHHHHHHHHHHHHHH
Q 013217 381 EKEFVAIADFIHEGVE 396 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~ 396 (447)
++++++..+.|.+++.
T Consensus 358 ~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 358 TPKLEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7888888888877664
No 189
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.4e-20 Score=184.32 Aligned_cols=213 Identities=21% Similarity=0.191 Sum_probs=152.3
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| +.++++.|.+. .+...||++|+.+++.+++++||+|+++++.|++.+.... . ....
T Consensus 51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~-----~-~~~~ 115 (388)
T PRK08861 51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN-----T-RANK 115 (388)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH-----H-HHhc
Confidence 556677887 57889999653 2334666699999999999999999999988876532110 0 0111
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
.++++..+ + ..|++++++++++ +|++|+++.++||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 116 ~gi~v~~v--d----~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~-----~ 183 (388)
T PRK08861 116 GDFKVQFV--D----QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL-----Q 183 (388)
T ss_pred CCeEEEEE--C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 12454443 2 2589999999987 89999999888885 78999999999999999999999876643 2
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccC-CCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
.|++ ++|++++|+|||++|+. ||+++++++ ++.+++..... .|. ..+... .+..++.+.+ +.-
T Consensus 184 ~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-----~~~~~~~~~~~~~G~--~~~p~~---a~l~~rgl~T--l~l 251 (388)
T PRK08861 184 KPLELGADFVIHSTTKYINGHSDVIGGVLITKTK-----EHAEELAWWGNCIGA--TGTPFD---SYMTLRGIRT--LGA 251 (388)
T ss_pred CCcccCCCEEEeecceeccCCCcceeEEEEecHH-----HHHHHHHHHHhccCC--CCChHH---HHHHHhcCCC--HHH
Confidence 3444 69999999999999875 588887664 56665553221 121 112211 2234454443 567
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 013217 293 YQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~ 311 (447)
++++..+|+..+++.|++.
T Consensus 252 R~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 252 RMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8999999999999999984
No 190
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.87 E-value=8.5e-20 Score=191.50 Aligned_cols=303 Identities=20% Similarity=0.211 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC--------CCCEEEEecCCCCcccCCCccccccccc
Q 013217 65 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVS 136 (447)
Q Consensus 65 ~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~--------pgd~Vl~~~~~~~~~~~~~~~~~~~~~~ 136 (447)
-+++...+.|+++++|.+. +.+++.+|++++.+.++++.. ..++|+++...|+.+.. ...
T Consensus 529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--------sa~ 596 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--------SAA 596 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--------HHH
Confidence 3444456689999999995 478889999888876666532 34678888877766521 123
Q ss_pred cccceeEEEecccCCCCCCCCHHHHHHHhhh--hCCcEEEEcCCCCCC-CCC-hHHHHHHHHHhCCEEEEehhhhccccc
Q 013217 137 GTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR-DFD-YPRMRQIADAVGALLMMDMAHISGLVA 212 (447)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~--~~~klii~~~~~~~~-~~~-~~~i~~ia~~~g~~livD~a~~~g~~~ 212 (447)
..| ++++.++++ ++|.+|+++|++++++ .+|++|+++.+++.+ ..| +++|+++||++|.++++|++|..++..
T Consensus 597 ~~G--~~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 597 MAG--MQVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred HCC--CEEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 444 466666666 5789999999999975 378888888665555 444 999999999999999999999665442
Q ss_pred cccCCCCCC-cccEEEeCCCcccC-----CCCC-ceEEeecCCcchhhHHHHhhhccC---------C---CCCCC-CcH
Q 013217 213 ASVVADPFK-YCDVVTTTTHKSLR-----GPRG-GMIFFKKDPVLGVELESAINNAVF---------P---GLQGG-PHN 272 (447)
Q Consensus 213 ~~~~~~~~~-~~Di~~~s~~K~l~-----Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~---------~---~~~g~-p~~ 272 (447)
. ..|-. ++|++++|.||+|+ |++| |++++++. +...+..... . +...+ +..
T Consensus 674 l---~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~------L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g 744 (939)
T TIGR00461 674 L---TSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH------LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYG 744 (939)
T ss_pred C---CCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh------chhhcCCCcccccccCCCCccccccccccccC
Confidence 2 22222 69999999999987 5566 89999873 2221110000 0 00011 111
Q ss_pred H--HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC---CCeeEEecCCC----CCCCHHHHHHHH
Q 013217 273 H--TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DNHLVLVDLRP----MGIDGARVEKIL 343 (447)
Q Consensus 273 ~--~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~v~~~~----~~~~~~~~~~~L 343 (447)
. .....++.++.+..+++++..+....|+++++++|.+ +++++..+. .-|-+++++++ .+++..++.+.|
T Consensus 745 ~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL 823 (939)
T TIGR00461 745 SASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRL 823 (939)
T ss_pred cHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHH
Confidence 1 1222334556666778888899999999999999987 677766432 23556778764 246678899999
Q ss_pred hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013217 344 DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 402 (447)
Q Consensus 344 ~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~~~ 402 (447)
.++|+..-..+.| ..+.+-+.....++ .+|+|++++++..+-.....+.
T Consensus 824 ~d~G~hapt~~~p------v~g~lmiepTE~es----keelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 824 QDYGFHAPTLSFP------VPGTLMVEPTESES----LEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred HhCCeeccccCCc------cCCeEEEEeeccCC----HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999985332222 12344444444555 9999999999988777665443
No 191
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.5e-19 Score=166.29 Aligned_cols=327 Identities=19% Similarity=0.124 Sum_probs=214.8
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC------CCccceeeecCCcH-HHHHHHH
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD------ENKWGVNVQPLSGS-PANFEVY 103 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~------~~~~~~~v~~~sGs-~a~~~~~ 103 (447)
.+++.+.+|+...+.+.-..||..+ .| +. .||+.++++++-+ ++ .|..|+|. +|+..++
T Consensus 78 ~ts~~a~~Av~~al~Sgk~N~Yaps---~G------~~-~AR~AVAeYl~~~l~~kl~a~----DV~ltsGC~qAIe~~i 143 (447)
T KOG0259|consen 78 RTSQEAEQAVVDALRSGKGNGYAPS---VG------IL-PARRAVAEYLNRDLPNKLTAD----DVVLTSGCSQAIELAI 143 (447)
T ss_pred cCCHHHHHHHHHHHhcCCCCCcCCc---cc------cH-HHHHHHHHHhhcCCCCccCcC----ceEEeccchHHHHHHH
Confidence 3578888888877766444565443 11 11 2344555653322 22 34458886 9999999
Q ss_pred HHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC
Q 013217 104 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYPR 182 (447)
Q Consensus 104 ~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~~~~klii~~~~~~~~ 182 (447)
.+|.+||..||++.|.++-+.+ .....+. ++..|++=| ++|.||++.+|+++++ +|.++++..|+||.
T Consensus 144 ~~LA~p~aNILlPrPGfp~Y~~--------~a~~~~l--EVR~ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPc 212 (447)
T KOG0259|consen 144 SSLANPGANILLPRPGFPLYDT--------RAIYSGL--EVRYYDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPC 212 (447)
T ss_pred HHhcCCCCceecCCCCCchHHH--------hhhhcCc--eeEeecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCC
Confidence 9999999999998765542211 2234444 556666544 5789999999999998 89888887777774
Q ss_pred --CC---ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCc----c-cEEEeCCCcc-c-CCCCCceEEeecCCcc
Q 013217 183 --DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY----C-DVVTTTTHKS-L-RGPRGGMIFFKKDPVL 250 (447)
Q Consensus 183 --~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~----~-Di~~~s~~K~-l-~Gp~gG~i~~~~~~~~ 250 (447)
.. -+++|+++|+++|+.+|.|+.+ -.+++.+....|+.. + -+..+|.+|- + +|||-|||+.++....
T Consensus 213 GnVys~~HL~kiae~A~klgi~vIaDEVY-~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gv 291 (447)
T KOG0259|consen 213 GNVYSEDHLKKIAETAKKLGIMVIADEVY-GHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGV 291 (447)
T ss_pred cccccHHHHHHHHHHHHHhCCeEEehhhc-ceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEeccccc
Confidence 33 3689999999999999999984 555555543334331 2 2556888994 4 8999999999886421
Q ss_pred hh--hHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCCCCeeEEe
Q 013217 251 GV--ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLV 327 (447)
Q Consensus 251 ~~--~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~v 327 (447)
.. ...+.+... -....+|.....+|+-.-|+..-++-|.....-+..|++...+.|++ +++.....++...++|+
T Consensus 292 f~~~~~~q~~~~~--~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv 369 (447)
T KOG0259|consen 292 FRDTKVVQGIKNF--LDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMV 369 (447)
T ss_pred ccchHHHHHHHHH--HhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEe
Confidence 11 111223221 12234666666777776777665555688888899999999999998 67775444445666666
Q ss_pred cCCCC-----CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 328 DLRPM-----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 328 ~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.+... +-|.+.+.++-+|..+.+ +||....+ ++++|+... +.++.+++..+.|++...
T Consensus 370 ~l~~s~~~~~~dD~dFc~kL~~Eesv~~----LPG~af~~-~nw~Ri~i~------~~~~~leea~~Rik~Fc~ 432 (447)
T KOG0259|consen 370 KLNLSLFPDIEDDVDFCQKLAREESVIC----LPGQAFGL-KNWLRIVIT------VEEEMLEEAFSRIKEFCD 432 (447)
T ss_pred ccchhhhccccccHHHHHHHhhhcceEE----eccccccC-CCeEEEEEc------cChHHHHHHHHHHHHHHH
Confidence 54321 223445566667889988 77775332 568999753 235667777777766544
No 192
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.87 E-value=1.5e-19 Score=177.32 Aligned_cols=317 Identities=13% Similarity=0.085 Sum_probs=203.1
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
+.++|..++|+ +|+.+.+++.+.+.. ..+|+.. . ...+. +.+++.++++++ +|.+++|+ +
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~------~-~~~Lr----~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP------D-YRELR----LALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc------C-HHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 45888888885 468888888765543 2234432 1 12343 456667788876 45568988 7
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCC----CCCHHHHHHHhhhhCCcEE
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG----LVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~id~~~l~~~~~~~~~kli 173 (447)
++..++.++. +||+|++.+|.|.++.. .+...|. ++++++++++++ ..|++++++.. . +++++
T Consensus 86 ~i~~~~~~l~-~g~~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 152 (360)
T PRK07392 86 LLTWAGRELA-QLRAVYLITPAFGDYRR--------ALRAFGA--TVKELPLPLDQPSPGLTLRLQTLPPQL-T-PNDGL 152 (360)
T ss_pred HHHHHHHHhC-CCCeEEEECCCcHHHHH--------HHHHcCC--eEEEEecccccCCcccccCHHHHHHhc-c-CCCEE
Confidence 8887777764 78999999998776532 3344554 555555654332 25677776543 2 67899
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---Cc--ccEEEeCCCccc--CCCCCceEEe
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRGGMIFF 244 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~~--~Di~~~s~~K~l--~Gp~gG~i~~ 244 (447)
+++.++||+ ..+.++|.++|+++++ +|+|+++ ..+...+..++.+ +. .-+++.|++|++ +|.|.|++++
T Consensus 153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y-~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAF-MDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECch-hhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 998889987 7788999999999985 6779985 4444332111111 11 237889999986 6889999999
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCC
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 322 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 322 (447)
++ ++.+.+.....+ .+.+.....++..+++ ...+ +...+.+.++++.+.+.|++. |+.+.. ...
T Consensus 231 ~~------~~~~~~~~~~~~---~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~ 296 (360)
T PRK07392 231 HP------DRLQRWQQWRDP---WPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLP--SAA 296 (360)
T ss_pred CH------HHHHHHHhhCCC---CCCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCC
Confidence 87 666666554322 1233333333333443 2234 334556777888888999874 777654 235
Q ss_pred eeEEecCCCCCCCHHHHHHH-HhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 323 HLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 323 ~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.++|+++.. +..++... |+++||.+..+... ....++++||++.. .++++++.+++.+++.
T Consensus 297 ~fl~~~~~~---~~~~l~~~ll~~~gv~v~pg~~f---~~~~~~~iRi~~~~-------~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 297 NFLLVQSQG---SALQLQEKLLQQHRILIRDCLSF---PELGDRYFRVAVRT-------EAENQRLLEALAAILA 358 (360)
T ss_pred CEEEEEcCC---CHHHHHHHHHhhCCEEEEeCCCC---CCCCCCEEEEEeCC-------HHHHHHHHHHHHHHhh
Confidence 566777642 45666655 57789999654211 11234689998643 6678888888877654
No 193
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.87 E-value=2.2e-20 Score=165.91 Aligned_cols=327 Identities=21% Similarity=0.218 Sum_probs=224.3
Q ss_pred eeEecCCCCC----CHHHHHHHhhhhhccCCCCCCCCcccCchhHH-HHHHHHHHHHHHHHcCCCCCccceeeecCCcHH
Q 013217 23 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI-DELETLCQKRALAAFNLDENKWGVNVQPLSGSP 97 (447)
Q Consensus 23 i~l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~-~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~ 97 (447)
|......||+ .|++.++-...+. .|..|..+.|+--|.+.+ ..+| ..++++.+-+. .+...|+..
T Consensus 69 ilnFcaNnYLGLsshPeii~a~~~ale-eyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscfd 138 (417)
T KOG1359|consen 69 ILNFCANNYLGLSSHPEIINAGQKALE-EYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCFD 138 (417)
T ss_pred eeeecccccccccCChHHHHHHHHHHH-HhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccccc
Confidence 3334566665 5889888777664 577888888876665544 4666 57888888775 355688889
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhh---hhCCcEEE
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI---LFRPKLII 174 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~---~~~~klii 174 (447)
||..++.++++|.|.|+...+.|.+.+. .+.+.. .-+.+|+-+++..+. ++|-|+|+
T Consensus 139 ANag~feail~pedAvfSDeLNhASIId--------GirLck------------ry~h~dv~~l~~~l~~a~k~r~klv~ 198 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASIID--------GIRLCK------------RYRHVDVFDLEHCLISACKMRLKLVV 198 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhhh--------hhHHHh------------hhccchhHHHHHHHHHhhhheEEEEE
Confidence 9999999999999999999888877642 122221 123456666654432 23556666
Q ss_pred Ec--CCCCCCCCChHHHHHHHHHhCCEEEEehhhhcccccccc---C--CCCCCcccEEEeCCCcccCCCCCceEEeecC
Q 013217 175 AG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV---V--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKD 247 (447)
Q Consensus 175 ~~--~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~---~--~~~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~ 247 (447)
.. .|.-+...|+++|.+++++||+++++|++|+.|+..... . ..-....|++.++..|.++|-.||+..+++
T Consensus 199 TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~- 277 (417)
T KOG1359|consen 199 TDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK- 277 (417)
T ss_pred ecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh-
Confidence 55 233333779999999999999999999999988664321 1 111235799999999999999999999998
Q ss_pred CcchhhHHHHhhhccCCCCCCCCcHHHHHHH-HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee-E
Q 013217 248 PVLGVELESAINNAVFPGLQGGPHNHTIGGL-AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL-V 325 (447)
Q Consensus 248 ~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~-~ 325 (447)
.+.+.++...-|+..++..++.+.+. +.++..+.. -.+.+++...+.+++++.++..|+.+.+. +|. .
T Consensus 278 -----~li~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~aGftIsg~---~hPI~ 347 (417)
T KOG1359|consen 278 -----PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAAGFTISGA---SHPIC 347 (417)
T ss_pred -----hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCceecCC---CCCcc
Confidence 68887877666666544333322222 223443332 23457788899999999999999998652 332 2
Q ss_pred EecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 326 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+-+.+.. -...+.+.|.+.||.|-.-..|- .|....+||+..++.++ +||++++++++.++.+.
T Consensus 348 pv~lGda~-lA~~~ad~lLk~Gi~Vigfs~Pv--VP~gkariRVqiSAaHt----~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 348 PVMLGDAR-LASKMADELLKRGIYVIGFSYPV--VPKGKARIRVQISAAHT----EEDIDRLIEAFSEVGRF 412 (417)
T ss_pred ceecccHH-HHHHHHHHHHhcCceEEeecCCc--CCCCceEEEEEEehhcC----HHHHHHHHHHHHHHHHh
Confidence 22232211 23456777788999985433332 23345689999999998 99999999999888764
No 194
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.87 E-value=2.7e-19 Score=177.91 Aligned_cols=334 Identities=15% Similarity=0.129 Sum_probs=194.4
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 96 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs- 96 (447)
++.++|..+++. +++.+.+++.+.+.+.... .....|+.......+.+.+.+++.+ .+++++ +|.+|+|+
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~-~~~~~d----~I~it~Ga~ 105 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYR-GRIDPE----EIFISDGAK 105 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHh-cCCCHH----HEEECCCcH
Confidence 456888877775 5788899988776542110 0001111111223444333332211 156665 45568888
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccc---------eeEEEecccCCC-CCCCCHHHHHHHhh
Q 013217 97 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI---------YFESMPYRLDES-TGLVDYDMLEKTAI 166 (447)
Q Consensus 97 ~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---------~~~~~~~~~~~~-~~~id~~~l~~~~~ 166 (447)
+++.. +..++.+||+|++.+|.|.++.. .+...|. +.++++++.+++ ++.+|+++
T Consensus 106 ~al~~-l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------ 170 (402)
T TIGR03542 106 CDVFR-LQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------ 170 (402)
T ss_pred HHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceEEEeecchhhCCCCCccc------
Confidence 66665 46677899999999998876532 1223332 014445555432 34445321
Q ss_pred hhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---Cc---ccEEEeCCCccc-
Q 013217 167 LFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTHKSL- 234 (447)
Q Consensus 167 ~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~~---~Di~~~s~~K~l- 234 (447)
..++++|+++.++||+ ..+ +++|.++|+++|+++|+|+++ ..+...+..+.++ +. .-+++.|++|.+
T Consensus 171 ~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g 249 (402)
T TIGR03542 171 EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAY-SAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAG 249 (402)
T ss_pred cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchh-hhhccCCCCCcchhhCCCCcccEEEEecCccccC
Confidence 1378999998888886 455 688999999999999999996 3444332212221 11 236789999987
Q ss_pred -CCCCCceEEeecCCcchhhHH--------HHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 013217 235 -RGPRGGMIFFKKDPVLGVELE--------SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 305 (447)
Q Consensus 235 -~Gp~gG~i~~~~~~~~~~~~~--------~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~ 305 (447)
+|.|.|++++++ ++. ..+........ .+++.....+...++..-......+..+.+.++++.+.
T Consensus 250 ~pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 322 (402)
T TIGR03542 250 FTGVRLGWTVVPK------ELTYADGHSVIQDWERRQCTKF-NGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILR 322 (402)
T ss_pred CCCcceEEEEecH------HHhhcchhhHHHHHHHHhhhcc-cCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHH
Confidence 678889999987 443 22211111111 12232222222223322111123445566778888899
Q ss_pred HHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHH
Q 013217 306 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 384 (447)
Q Consensus 306 ~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di 384 (447)
+.|++.|+++..+ ....++|+.+.. .++..++.+.| ++.||.+..+... .....+++||+.. .+ ++++
T Consensus 323 ~~L~~~~~~~~~~-~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~pg~~f---~~~~~~~iRis~~--~~----~~~l 391 (402)
T TIGR03542 323 KALEAAGFKVYGG-EHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGTPGSGF---GPSGEGFVRFSAF--GK----RENI 391 (402)
T ss_pred HHHHhcCceecCC-CceeEEEEECCC-CCCHHHHHHHHHHhCCEEEeCchhh---CCCCCCEEEEEec--CC----HHHH
Confidence 9998888776543 346677888754 45666666655 5789999654221 1112468999842 23 7888
Q ss_pred HHHHHHHHHH
Q 013217 385 VAIADFIHEG 394 (447)
Q Consensus 385 ~~l~~~i~~~ 394 (447)
++..+.|+++
T Consensus 392 ~~~l~~l~~~ 401 (402)
T TIGR03542 392 VEACERIKEA 401 (402)
T ss_pred HHHHHHHHhh
Confidence 8887777654
No 195
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=1.4e-20 Score=185.77 Aligned_cols=224 Identities=21% Similarity=0.222 Sum_probs=151.9
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
+|...|| +++....+| +++++++|+++. . .++||+.|+..++.++++|||+|+++++.|+++.....
T Consensus 56 ~~~y~r~--~~p~~~~Le----~~lA~l~G~~~~----~-~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~-- 122 (398)
T PRK07504 56 GFIYSRY--SNPTVDMFE----KRMCALEGAEDA----R-ATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE-- 122 (398)
T ss_pred CceeecC--CCchHHHHH----HHHHHHhCCCee----e-EecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH--
Confidence 4444443 345566777 578899999863 2 25799999988888899999999999988877532110
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
......| +++..+ + .+|++++++++++ +||+|++++++||+ ..|+++|.++|+++|+++++|++|+.
T Consensus 123 --~~~~~~G--~~v~~v--d----~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~ 191 (398)
T PRK07504 123 --TLLPRYG--IESTLV--D----GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFAT 191 (398)
T ss_pred --HHHhhcC--eEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccc
Confidence 0011223 344443 2 3799999999987 89999999888875 78999999999999999999999876
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
+.. ..++. ++|++++|+||+++|+. ||+++++++ .+.+++...... .|.......++ .+++.
T Consensus 192 ~~~-----~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~-----~i~~~~~~~~~~--~g~~~s~~~A~--~~l~~ 257 (398)
T PRK07504 192 PLF-----QKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA-----WIEEHLQDYFRH--TGPSLSPFNAW--TLLKG 257 (398)
T ss_pred ccc-----CCchhhCCCEEEeeccccccCCccceEEEEEeCcH-----HHHHHHHHHHHH--hCCCCCHHHHH--HHHhc
Confidence 643 23333 58999999999997643 477777763 232333321111 12111122222 23343
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHH-CCcE
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
+. .+..++++..+|+..+.+.|++ +++.
T Consensus 258 L~--tl~~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 258 LE--TLPVRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred cc--hHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 33 3567888999999999999987 3443
No 196
>PRK04311 selenocysteine synthase; Provisional
Probab=99.87 E-value=1.5e-19 Score=179.84 Aligned_cols=322 Identities=17% Similarity=0.172 Sum_probs=198.2
Q ss_pred CCCCCCHHHHHHHhhhhhccCCC-CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh
Q 013217 28 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 106 (447)
Q Consensus 28 ~~n~~~~~v~~a~~~~~~~~~~~-g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al 106 (447)
+-+++|+++++++..++.+ |.. .|.......| +..+.+| +.+++++|++.. +.++||+.|+..++.+
T Consensus 94 g~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g-~r~~~~e----~~lA~l~Gae~a-----~vv~sgtaAl~l~l~~- 161 (464)
T PRK04311 94 GRALLSEAAIEAVTEAARG-YSNLEYDLATGKRG-SRDRALA----ALLCALTGAEDA-----LVVNNNAAAVLLALNA- 161 (464)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccccccchhhcccc-hHHHHHH----HHHHHHhCCCeE-----EEECCHHHHHHHHHHH-
Confidence 3446799999999887764 321 1100000011 2233444 689999999852 3458898998877755
Q ss_pred cCCCCEEEEecCCCC---cccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCC--
Q 013217 107 LKPHDRIMGLDLPHG---GHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 181 (447)
Q Consensus 107 ~~pgd~Vl~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~-- 181 (447)
+.+||+|++++.++. +.+... ..+...|. +++.++.+ +..+++++++++++ +|++|++.+++|+
T Consensus 162 l~~GdeVIvs~~e~~~~ggs~~i~-----~~~~~~G~--~l~~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i 230 (464)
T PRK04311 162 LAAGKEVIVSRGELVEIGGAFRIP-----DVMRQAGA--RLVEVGTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRI 230 (464)
T ss_pred hCCCCEEEEcchhhhhcCcchhhH-----HHHHHCCc--EEEEECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCccc
Confidence 589999999876543 221110 11233453 55554443 34689999999987 8999888754442
Q ss_pred ----CCCChHHHHHHHHHhCCEEEEehhhhcccccc----c--cCC---CCCC-cccEEEeCCCcccCCCCCceEEeecC
Q 013217 182 ----RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----S--VVA---DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 247 (447)
Q Consensus 182 ----~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~----~--~~~---~~~~-~~Di~~~s~~K~l~Gp~gG~i~~~~~ 247 (447)
...|+++|+++|++||+++++|.+ +|.+.. + ..+ .++. ++|++++|+||+|+||.+|++++++
T Consensus 231 ~G~~~~~dl~eI~~lak~~gi~vivD~g--sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~- 307 (464)
T PRK04311 231 EGFTKEVSLAELAALGKEHGLPVVYDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKK- 307 (464)
T ss_pred cccCCcCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcH-
Confidence 257999999999999999999985 333210 0 011 2222 6999999999999999999999987
Q ss_pred CcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChh-----------HHHHHHHHHHHHHHHHHHHHHC---Cc
Q 013217 248 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVEL---GY 313 (447)
Q Consensus 248 ~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~-----------~~~~~~~~~~~~~~l~~~L~~~---g~ 313 (447)
++.+++.+....-.. ...-..++++...+.....+. +....+++.+++..+++.|.+. ++
T Consensus 308 -----~li~~l~~~~~~r~l-r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~ 381 (464)
T PRK04311 308 -----ELIARLKKHPLKRAL-RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAF 381 (464)
T ss_pred -----HHHHHHhhchhHHHH-hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCe
Confidence 676666531100000 001223555555555332211 1223477888999999999873 22
Q ss_pred --Eeee------CCCC--C--eeEEecCCCCCCCHHHHHHHHhhcC--eEEccCCCCCCCCCCCCCeEEEecCccccCCC
Q 013217 314 --KLVS------GGSD--N--HLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 379 (447)
Q Consensus 314 --~~~~------~~~~--~--~~~~v~~~~~~~~~~~~~~~L~~~g--I~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~ 379 (447)
++.. +|+. . .-..+.+.+.+.+..++.+.|++.. |..+. ..+.+.+ .-|.+
T Consensus 382 ~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~----------~~~~~~l-----d~r~~ 446 (464)
T PRK04311 382 AVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRI----------EDGRLLL-----DLRTL 446 (464)
T ss_pred eEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEE-----EeCcC
Confidence 3432 1211 1 1223445555677889999998744 54431 1223443 33566
Q ss_pred CHHHHHHHHHHHHHHHH
Q 013217 380 SEKEFVAIADFIHEGVE 396 (447)
Q Consensus 380 ~~~di~~l~~~i~~~l~ 396 (447)
.++|++.+++.+.+++.
T Consensus 447 ~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 447 EEEDEERLAAALLEALN 463 (464)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 79999999999988753
No 197
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=3.8e-20 Score=182.29 Aligned_cols=216 Identities=24% Similarity=0.243 Sum_probs=151.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +.+++++|.+.. +.++||++|+.+++.++++|||+|++.++.|++.+.... ......|
T Consensus 59 ~~p~~~~Le----~~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~g 125 (388)
T PRK07811 59 GNPTRTALE----EQLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLID----KVFTRWG 125 (388)
T ss_pred CCccHHHHH----HHHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHH----HhCcCCC
Confidence 334566776 678899998863 335889999999999999999999999998876532110 0111122
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
+++..++ ..|++++++++++ +||+|+++.++||+ ..|+++|.++|+++|+++++|++++.+.. .
T Consensus 126 --i~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~ 191 (388)
T PRK07811 126 --VEYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----Q 191 (388)
T ss_pred --eEEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 2333322 2589999999987 89999998888875 78999999999999999999999866543 2
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCC-CCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~-~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
.|+. ++|++++|++|+++||. ||+++++++ ++.+++...... +. ..... .+ +.+++.+. .+..
T Consensus 192 ~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-----~l~~~~~~~~~~~g~--~~s~~--~a-~l~~~~L~--tl~~ 259 (388)
T PRK07811 192 QPLALGADVVVHSTTKYIGGHSDVVGGALVTNDE-----ELDEAFAFLQNGAGA--VPGPF--DA-YLTLRGLK--TLAV 259 (388)
T ss_pred CchhhCCcEEEecCceeecCCCCcEEEEEEECCH-----HHHHHHHHHHHhcCC--CCCHH--HH-HHHHhccC--cHHH
Confidence 2333 68999999999998874 688888764 666655432211 11 11111 11 23344333 3567
Q ss_pred HHHHHHHHHHHHHHHHHH-CCcE
Q 013217 293 YQNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
++++..+|+..+++.|++ +++.
T Consensus 260 R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 260 RMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 788899999999999988 4443
No 198
>PLN02880 tyrosine decarboxylase
Probab=99.86 E-value=9.5e-20 Score=183.56 Aligned_cols=314 Identities=15% Similarity=0.115 Sum_probs=194.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCcc----ceeeecCCcHHHHHHHHHHhcC-----C-----CC-EEEEecCCCCcccCC
Q 013217 62 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK-----P-----HD-RIMGLDLPHGGHLSH 126 (447)
Q Consensus 62 ~~~~~le~~~~~~~~~~~g~~~~~~----~~~v~~~sGs~a~~~~~~al~~-----p-----gd-~Vl~~~~~~~~~~~~ 126 (447)
+...++|+.+.+|+++++|.+...+ +.-+.+++||+||+.++.+-.. . .. .|++.+-. |++.
T Consensus 118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a---H~Sv 194 (490)
T PLN02880 118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT---HSAL 194 (490)
T ss_pred cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc---hHHH
Confidence 3466899999999999999986421 1123345667898877654321 1 12 23334333 3322
Q ss_pred Ccccccccccccccee-EEEecccCC-CCCCCCHHHHHHHhhhh-----CCcEEEEc-CC-CCCCCCChHHHHHHHHHhC
Q 013217 127 GFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAG-AS-AYPRDFDYPRMRQIADAVG 197 (447)
Q Consensus 127 ~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~id~~~l~~~~~~~-----~~klii~~-~~-~~~~~~~~~~i~~ia~~~g 197 (447)
. +.+.+.|.+. .++.+++|. +++.+|+++|++.+.+. .|-+|+.+ .+ +.+...|+++|+++|+++|
T Consensus 195 ~-----Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~ 269 (490)
T PLN02880 195 Q-----KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG 269 (490)
T ss_pred H-----HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence 1 3455666542 233444653 35789999999998653 25566665 23 3333789999999999999
Q ss_pred CEEEEehhhhccccccccCC---CCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhc---cCC------
Q 013217 198 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA---VFP------ 264 (447)
Q Consensus 198 ~~livD~a~~~g~~~~~~~~---~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~---~~~------ 264 (447)
+|++||+||+.++...+.+. ..+..+|.++.++|||+..|.+ |++++++.. .+.+.+... ...
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~----~l~~~~~~~~~Yl~~~~~~~~ 345 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRN----ALIQSLSTNPEFLKNKASQAN 345 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHH----HHHHHHccCHHHhcCcccccc
Confidence 99999999876654332211 1233689999999999999999 999998631 111111100 000
Q ss_pred --------CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCCCCeeEEecCCCCCCC
Q 013217 265 --------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGID 335 (447)
Q Consensus 265 --------~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~v~~~~~~~~ 335 (447)
..+.+-. ..-..++.+++....+++.+++++..+.++++.+.|.+ .+++++.+. ...++.+.+.+...+
T Consensus 346 ~~~~~~~~~i~~~rr-~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~Fr~~~~~~~ 423 (490)
T PLN02880 346 SVVDYKDWQIPLGRR-FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVCFRLVPPKNN 423 (490)
T ss_pred CCCChhccCcCCCCc-ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEEEeCCCCC
Confidence 0001111 11234566777777778888888888999999999977 689988753 233444444433222
Q ss_pred H-------HHHHHHHhh-cCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 336 G-------ARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 336 ~-------~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
. .++.+.|.+ ..+.+....+.+ ...+|+++....| +++|++.+.+.|.+.....
T Consensus 424 ~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g------~~~lR~~~~n~~t---t~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 424 EDNGNKLNHDLLDAVNSSGKIFISHTVLSG------KYVLRFAVGAPLT---EERHVTAAWKVLQDEASKL 485 (490)
T ss_pred hhhHHHHHHHHHHHHHhCCCEEEEEEEECC------EEEEEEEecCCCC---CHHHHHHHHHHHHHHHHHH
Confidence 1 234444443 455554322221 3479998776555 4899999999998876543
No 199
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.86 E-value=5e-20 Score=181.58 Aligned_cols=246 Identities=23% Similarity=0.233 Sum_probs=162.9
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 105 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~a 105 (447)
..+..+..+.+.+++..+... ..+|+..|+ +++..+.+| +++++++|.+. .+.++||++|+..++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~--~~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~a 95 (390)
T PRK08133 29 FLTSSFVFESAAEAAARFAGE--EPGNIYSRF--TNPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVMA 95 (390)
T ss_pred cCCCCcccCCHHHHHHhhcCC--cCCceeECC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHH
Confidence 344455556666665543322 124554554 345566666 67889999875 24458888999999999
Q ss_pred hcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--C
Q 013217 106 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 183 (447)
Q Consensus 106 l~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~ 183 (447)
+++|||+|++.++.|++.+.... ..+...|. +++.+++ .|++++++++++ +||+|+++.++||+ .
T Consensus 96 l~~~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~--~v~~vd~------~d~~~l~~~i~~-~tklV~ie~p~NptG~v 162 (390)
T PRK08133 96 LLQAGDHVVSSRSLFGSTVSLFE----KIFARFGI--ETTFVDL------TDLDAWRAAVRP-NTKLFFLETPSNPLTEL 162 (390)
T ss_pred HhCCCCEEEEccCcchhHHHHHH----HHHHHcCc--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCCc
Confidence 99999999999988877542110 11122343 5555433 278999999987 89999998777775 7
Q ss_pred CChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhh
Q 013217 184 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 259 (447)
Q Consensus 184 ~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~ 259 (447)
.|+++|.++|+++|+++++|+++..+.. ..|+. ++|++++|+||+++|+. ||+++.++ ++.+++.
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~-----~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~------~~~~~~~ 231 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPAL-----QQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSK------ELMEEVF 231 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEEeecceeecCCcceEeEEEEcCH------HHHHHHH
Confidence 8999999999999999999999765533 22333 58999999999997642 47888776 4444443
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcE
Q 013217 260 NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 260 ~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
...... ...+.. .. .+.+++.+. .+..+++++.+|+..+++.|++ +++.
T Consensus 232 ~~~~~~-g~~~~~--~~-a~~~l~gl~--tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 232 GFLRTA-GPTLSP--FN-AWVFLKGLE--TLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHh-CCCCCH--HH-HHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 221111 111121 11 122333332 4677888999999999999988 3554
No 200
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=6.8e-20 Score=180.92 Aligned_cols=213 Identities=22% Similarity=0.193 Sum_probs=149.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| ++++++.|.+. .+.++||++|+.+++.++++|||+|++..+.|++...... ......|
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~----~~~~~~g 124 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFN----ALAKKGH 124 (405)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHH----HHHHhcC
Confidence 445556676 57888999754 3556889999999999999999999999888876421100 0011122
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
.+++.++ ..|++++++++++ +||+|+++.++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 125 --~~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-----~ 190 (405)
T PRK08776 125 --FALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-----Q 190 (405)
T ss_pred --cEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3444432 2489999999876 89999998888875 78999999999999999999999865532 2
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccC-CCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
.|+. ++|++++|+||+++|+. ||+++++++ ++.+++..... .+. .++..... ..++.+ ..++.
T Consensus 191 ~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-----~l~~~l~~~~~~~g~--~~s~~~a~---l~~~gl--~tl~~ 258 (405)
T PRK08776 191 KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA-----ELHQQLVWWANALGL--TGSPFDAF---LTLRGL--RTLDA 258 (405)
T ss_pred CcccccCCEEEecCceeecCCCCceEEEEEeCCH-----HHHHHHHHHHHhcCC--CCCHHHHH---HHHhhh--CcHHH
Confidence 3444 68999999999998875 588877654 66666643221 121 12222221 222332 24677
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 013217 293 YQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~ 311 (447)
+++++.+|+..+++.|++.
T Consensus 259 r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 259 RLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999873
No 201
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=6.5e-20 Score=179.99 Aligned_cols=288 Identities=19% Similarity=0.172 Sum_probs=186.9
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| +++++++|.+. .+.++||+.|+.+++. +++|||+|++.++.|++...... ..+...|
T Consensus 45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G 110 (378)
T TIGR01329 45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT----QVVPRSG 110 (378)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH----HHHHHcC
Confidence 455567777 68889999854 3445888888876665 78999999999988876532110 0111234
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++. .|++++++++++ +||+|++++++|+. ..|+++|+++|+++|+++++|++|+.+.. .
T Consensus 111 ~--~v~~vd~------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-----~ 176 (378)
T TIGR01329 111 V--VVVHVDT------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-----C 176 (378)
T ss_pred c--EEEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3 4444332 389999999986 89999999777775 77999999999999999999999866643 2
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccC-CCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
.|+. ++|++++|+||+++||. +|+++++++ ++.+++..... .+.. .+. .-+ +..++.+ ..+..
T Consensus 177 ~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-----~~~~~~~~~~~~~G~~--~~~-~~a--~l~~~~l--~tl~~ 244 (378)
T TIGR01329 177 NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-----EIAKKVYFLQNSTGSG--LAP-FDC--WLLLRGI--KTLAI 244 (378)
T ss_pred ChhhcCCcEEEEecceeccCCccceeEEEEeCcH-----HHHHHHHHHHHhcCCc--CCH-HHH--HHHHccC--CCHHH
Confidence 2333 68999999999998865 588888764 56566654332 1211 111 111 1123332 24677
Q ss_pred HHHHHHHHHHHHHHHHHHC-Cc-EeeeCCC---------------CCeeEEecCCCCCCC-HHHHHHHHhhcCeEEccCC
Q 013217 293 YQNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGID-GARVEKILDMASITLNKNS 354 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~---------------~~~~~~v~~~~~~~~-~~~~~~~L~~~gI~v~~~~ 354 (447)
++++..+|+..+++.|++. .+ ++..++- ...++.+++ .+.. ..++.+.|+..+|.++.+.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~--~~~~~~~~~~~~L~~~~i~~s~G~ 322 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET--GSVALSKRLVEATKLFSITVSFGS 322 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE--CCHHHHHHHHHhCcCcccccCCCC
Confidence 8999999999999999873 22 2222211 012333344 2323 4567777877788887642
Q ss_pred ------CCCCC-----C-------CCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 355 ------VPGDK-----S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 355 ------~p~~~-----~-------~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.|... . ...++-||+|.. -||.+.+.+-|.++|..
T Consensus 323 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 323 VNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG--------IEDVDDLISDLDIAFVT 375 (378)
T ss_pred CCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHHh
Confidence 13211 0 012346898876 46777777777777764
No 202
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=7e-20 Score=180.51 Aligned_cols=287 Identities=17% Similarity=0.182 Sum_probs=187.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| +++++++|.+. .+.++||+.|+.+++. ++++||+|+++++.|++.+.... ..+...|
T Consensus 52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G 117 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFG 117 (390)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcC
Confidence 456667777 68899999875 2445999988887775 78999999999998887543211 1122334
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++. .|++++++++++ +|++|++++++||+ ..|+++|.++|+++|+++++|++++.+...
T Consensus 118 ~--~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~----- 183 (390)
T PRK08064 118 I--EHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ----- 183 (390)
T ss_pred C--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc-----
Confidence 3 4444332 278999999877 89999999888775 789999999999999999999997655321
Q ss_pred CCCC-cccEEEeCCCcccCCCCC---ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~g---G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|+++.|+||+++|+.+ |+++++++ ++.+++.....+. |......-+.+ +++.+. .+..+
T Consensus 184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-----~~~~~l~~~~~~~--g~~~~~~~a~l--~~~gl~--tl~~R 252 (390)
T PRK08064 184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-----ELAQKLYFLQNSF--GAVLGVQDCWL--VLRGLK--TLHVR 252 (390)
T ss_pred CchhhCCcEEEeecceeccCCccceeEEEEeCCH-----HHHHHHHHHHHhc--CCCCCHHHHHH--HHcccC--cHHHH
Confidence 2333 589999999999988764 88887753 6777766544322 22121222222 333332 25677
Q ss_pred HHHHHHHHHHHHHHHHHCC-c-EeeeCCCC---------------CeeEEecCCCCCCCHHHHHHHHhhcCe---EEccC
Q 013217 294 QNKVVSNCRALASRLVELG-Y-KLVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASI---TLNKN 353 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~~g-~-~~~~~~~~---------------~~~~~v~~~~~~~~~~~~~~~L~~~gI---~v~~~ 353 (447)
+++..+|+..+.+.|++.+ + ++..++-. ..++.+++. +.+++.++++..++ .++.+
T Consensus 253 ~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~----~~~~~~~f~~~l~l~~~~~s~G 328 (390)
T PRK08064 253 LEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ----SEEAVRQFVSHVKLPVFAVSLG 328 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC----CHHHHHHHHHhCCcceEcccCC
Confidence 8999999999999998843 2 23222111 112233332 23456777777776 44443
Q ss_pred C------CCCC---C--C-------CCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 354 S------VPGD---K--S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 354 ~------~p~~---~--~-------~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
. .|.. . . ...++-||+|.+..+. ++.++.+.++|++
T Consensus 329 ~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~----~dli~dl~~Al~~ 382 (390)
T PRK08064 329 AVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENV----DDLIADFEQALSY 382 (390)
T ss_pred CCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCH----HHHHHHHHHHHHh
Confidence 1 1111 0 0 0124569999987776 7777777777665
No 203
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=5e-20 Score=180.16 Aligned_cols=290 Identities=14% Similarity=0.088 Sum_probs=182.0
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccc
Q 013217 59 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 138 (447)
Q Consensus 59 ~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 138 (447)
.|++..+.+| +.++++.|.+. .+.++||++|+..++.++++|||+|+++++.|++..... .......
T Consensus 47 ~gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~----~~~~~~~ 113 (377)
T TIGR01324 47 RGTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFC----DIVLKRM 113 (377)
T ss_pred CCCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHHHHhc
Confidence 4667778888 57888999764 244578889999999999999999999988776532100 0011122
Q ss_pred cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccC
Q 013217 139 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 216 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~ 216 (447)
|. ++..++.+ +.+++++++++ +||+|++++++|+. ..|+++|+++|+++|+++++|++|+.|....
T Consensus 114 gi--~v~~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~--- 181 (377)
T TIGR01324 114 GV--DITYYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK--- 181 (377)
T ss_pred Cc--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---
Confidence 32 33332211 23789888877 89999998777775 7799999999999999999999998876532
Q ss_pred CCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCC-CcHHHHHHHHHHHHHhcChhHH
Q 013217 217 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGG-PHNHTIGGLAVCLKHAQSPEFK 291 (447)
Q Consensus 217 ~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~-p~~~~~aal~~al~~~~~~~~~ 291 (447)
|+. ++|++++|++|+++|+. ||++++++ +..+++..... ..|+ .+... .+..++.+. .+.
T Consensus 182 --pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~------~~~~~l~~~~~--~~G~~l~p~~---a~~~~rgl~--tl~ 246 (377)
T TIGR01324 182 --PLEHGVDISIQAGTKYLVGHSDIMIGTVVANA------RTWDQLREHSY--LMGQMVDADD---AYTTLRGLR--TLG 246 (377)
T ss_pred --ccccCceEEEecCceeccCCCCceEEEEEeCH------HHHHHHHHHHH--HhCCCCCHHH---HHHHHhhhh--hHH
Confidence 333 69999999999998875 48888776 55554442211 1122 22222 122333333 245
Q ss_pred HHHHHHHHHHHHHHHHHHHC-Cc-EeeeCC---------------CCCeeEEecCCCCC-CCHHHHHHHHhhcCeEEccC
Q 013217 292 VYQNKVVSNCRALASRLVEL-GY-KLVSGG---------------SDNHLVLVDLRPMG-IDGARVEKILDMASITLNKN 353 (447)
Q Consensus 292 ~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~---------------~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~ 353 (447)
.++++..+|+..+++.|++. .+ ++..++ ...+++.+.+...+ .....+.+.|+-.++.++.+
T Consensus 247 ~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG 326 (377)
T TIGR01324 247 VRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWG 326 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCC
Confidence 56899999999999999883 33 333321 11334445553211 11234555555566666653
Q ss_pred CC------CC-CC-------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 354 SV------PG-DK-------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 354 ~~------p~-~~-------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.. |. .. ....++-||+|.. -||.+.+.+-|.+++.
T Consensus 327 ~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svG--------lE~~~dl~~dl~~al~ 375 (377)
T TIGR01324 327 GYESLALCNQPELGHRPNIKRNLEGPLIRVHIG--------LENVDDLKADLKAGFE 375 (377)
T ss_pred CccceeecCCCCCCHHHHHhccCCCCEEEEEeC--------CCCHHHHHHHHHHHHh
Confidence 21 11 00 0011235888876 3566666766666654
No 204
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.86 E-value=6.8e-20 Score=181.21 Aligned_cols=293 Identities=16% Similarity=0.180 Sum_probs=185.5
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
++....++| +.+++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++.+.... ..+...|
T Consensus 62 ~~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G 128 (400)
T PRK06234 62 GNPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN----HGLTRYG 128 (400)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHhhCC
Confidence 344566777 57888999763 3456889999999999999999999999988876542110 1122344
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHh--CCEEEEehhhhcccccccc
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASV 215 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~--g~~livD~a~~~g~~~~~~ 215 (447)
. +++.++. .|++++++++++ +||+|+++.++||+ ..|+++|.++|+++ |+++++|+++..+...
T Consensus 129 ~--~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~--- 196 (400)
T PRK06234 129 V--EVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ--- 196 (400)
T ss_pred e--EEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC---
Confidence 3 4444332 389999999987 89999999888876 78999999999997 9999999998665332
Q ss_pred CCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHH
Q 013217 216 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 291 (447)
Q Consensus 216 ~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~ 291 (447)
.++. ++|++++|++|+++|+. ||++++++ ++.+++.........|.......+. .+++.+. .+.
T Consensus 197 --~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~------~~~~~l~~~~~~~~~g~~l~p~~a~--l~~~~l~--tl~ 264 (400)
T PRK06234 197 --RPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE------EFINQVKLFGIKDMTGSVIGPFEAF--LIIRGMK--TLQ 264 (400)
T ss_pred --CchhhCCcEEEeeccccccCCCCceeEEEEecH------HHHHHHHHHHHHHhcCCCCCHHHHH--HHHhccC--cHH
Confidence 2333 58999999999997654 59999887 6666654321111112212222222 2333333 356
Q ss_pred HHHHHHHHHHHHHHHHHHHC-CcE-eeeCCC---------------CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCC
Q 013217 292 VYQNKVVSNCRALASRLVEL-GYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS 354 (447)
Q Consensus 292 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~ 354 (447)
.++++..+|+..+++.|++. .+. +..++- ..+++.+.+....-....+.+.|+-.++.++.+.
T Consensus 265 ~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~ 344 (400)
T PRK06234 265 IRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGD 344 (400)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCC
Confidence 77888999999999999873 332 222210 1234444543210012345555655666665432
Q ss_pred ------CCCCC------------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 355 ------VPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 355 ------~p~~~------------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.|... ....++-||+|.+ -||.+.+.+-|.++|..
T Consensus 345 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~~ 397 (400)
T PRK06234 345 AETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG--------LEDVDDIIADLKQALDL 397 (400)
T ss_pred CCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC--------CCCHHHHHHHHHHHHHH
Confidence 13211 0112346899876 35666666666666653
No 205
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=7e-20 Score=179.86 Aligned_cols=213 Identities=19% Similarity=0.202 Sum_probs=149.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| ++++++.|.+. .+...||++|+..++.++++|||+|++.++.|++.+.... ......+
T Consensus 50 ~~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~g 116 (386)
T PRK08045 50 GNPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD----SLAKRGC 116 (386)
T ss_pred CCccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhCC
Confidence 445566776 58888988642 3445777799999999999999999999998876432110 0001111
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
+++.. ++ ..|++++++++++ +|++|+++.++||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 117 --i~v~~--vd----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~-----~ 182 (386)
T PRK08045 117 --YRVLF--VD----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-----Q 182 (386)
T ss_pred --eEEEE--eC----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 23333 22 3689999999877 89999999888886 78999999999999999999999865532 2
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccC-CCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
.|+. ++|+++.|+|||++|+. +|+++++++ ++.+++..... .+.. .+... .+.+++.+.+ +..
T Consensus 183 ~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-----~~~~~l~~~~~~~g~~--~~p~~---~~l~~rgl~t--l~~ 250 (386)
T PRK08045 183 NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIGVT--GGAFD---SYLLLRGLRT--LVP 250 (386)
T ss_pred CchhhCCCEEEeecceeccCCCCceeEEEEeCcH-----HHHHHHHHHHHhcCCC--CCHHH---HHHHHhhhcc--HHH
Confidence 3444 68999999999999887 488877653 56665543221 1211 12111 1223333332 667
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 013217 293 YQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~ 311 (447)
+++++.+|+..+++.|++.
T Consensus 251 R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 251 RMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999884
No 206
>PLN02452 phosphoserine transaminase
Probab=99.86 E-value=4.3e-19 Score=172.02 Aligned_cols=336 Identities=15% Similarity=0.129 Sum_probs=217.1
Q ss_pred hcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHH
Q 013217 20 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 98 (447)
Q Consensus 20 ~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a 98 (447)
.+.+++.|++..+|+.|++++...+.+.-..|..-. -.+.+.++.+.++ .+++.++++++.+.+ +.+.+...|||.+
T Consensus 6 ~~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~-~~~~~L~~l~~~p~~-y~v~~l~Gsgt~~ 83 (365)
T PLN02452 6 GRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQ-KAEADLRELLDIPDN-YEVLFLQGGASTQ 83 (365)
T ss_pred CceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEeCccHHH
Confidence 345899999999999999999887765211222111 1123455555554 678899999998543 2244556888899
Q ss_pred HHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 99 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 99 ~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
+.++..+++.+||++++.. .|.++..+. +.+...|....+...+-......+|+++++. .+ +.+.|.+++.
T Consensus 84 ~ea~~~nl~~~~~~~l~~~---~G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~hn 154 (365)
T PLN02452 84 FAAIPLNLCKPGDKADFVV---TGSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TP-DAKFVHICAN 154 (365)
T ss_pred HHHHHHhcCCCCCeEEEEE---CCHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CC-CCcEEEECCC
Confidence 9999999999999999876 333332211 1222333311111100110112567777532 22 5677877744
Q ss_pred CCCC---CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhH
Q 013217 179 AYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 254 (447)
Q Consensus 179 ~~~~---~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~ 254 (447)
.+++ ..|++++. ++++++|+++++|..+.++.. .++..+|.||++ ||.| |++++++ ++
T Consensus 155 ETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~-----~~v~~~saqK~l-GP~Gl~~v~vr~------~~ 216 (365)
T PLN02452 155 ETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSK-----YGVIYAGAQKNV-GPSGVTIVIIRK------DL 216 (365)
T ss_pred CCCCcEecCcccccC------CCeEEEECCccccCcccCHHH-----cCEEEEeccccc-CCCCeEEEEEcH------HH
Confidence 3332 25666654 389999999988866544322 345557999988 7999 9999998 44
Q ss_pred HHHhhhcc-----------CCCCCCCCcHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHH-CCcEee-eCCC
Q 013217 255 ESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVE-LGYKLV-SGGS 320 (447)
Q Consensus 255 ~~~i~~~~-----------~~~~~g~p~~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~ 320 (447)
.+++.... ...+.+||+.+.+.++..+++++.++ +++.+.++..+.++++.+.|.+ .|+... .+..
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~ 296 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKS 296 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChH
Confidence 44432210 11224799999999999999998875 7899999999999999999988 577111 1101
Q ss_pred -CCe-eEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 321 -DNH-LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 321 -~~~-~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.+. .+.+.+.... ..+++.+.++++|+.. ++|+.. -+++|+|+-.. |..++++.|++++++.-+
T Consensus 297 ~rs~~~vsF~~~~~~-~~~~f~~~~~~~g~~~----~~G~r~---~gg~R~s~yna----~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 297 VRSLMNVPFTLGGSE-LEAEFVKEAAKAGMVQ----LKGHRS---VGGMRASIYNA----MPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred HhCCeEEEEEcCCch-hHHHHHHHHHHCCCcc----cCCccc---cCceEEECcCC----CCHHHHHHHHHHHHHHHH
Confidence 122 2233333322 4567888899999987 566642 23599996433 559999999999987654
No 207
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.86 E-value=1e-19 Score=180.65 Aligned_cols=331 Identities=15% Similarity=0.177 Sum_probs=194.9
Q ss_pred hcCeeEecCC----C-CCC--HHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCC--CCCccceee
Q 013217 20 FKSLELIASE----N-FTS--RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 90 (447)
Q Consensus 20 ~~~i~l~~~~----n-~~~--~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~--~~~~~~~~v 90 (447)
...|+|..+. + ..| +.+.+++.+.+......+|+.. ....++.+.+.+++.+..+. +++++ .|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~------~G~~~lR~aia~~~~~~~~~~~~~~~i--~v 97 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPI------EGLAAYRQAVQELLFGADSPALAAGRV--AT 97 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCC------CCCHHHHHHHHHHhcCCCCcccccCeE--EE
Confidence 4568876652 2 223 6788887776543211133321 22234544444565544332 34432 23
Q ss_pred ecCCcH-HHHHHHHHHh--cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEeccc-CCCCCCCCHHHHHHHhh
Q 013217 91 QPLSGS-PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAI 166 (447)
Q Consensus 91 ~~~sGs-~a~~~~~~al--~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~id~~~l~~~~~ 166 (447)
.+|+|+ +|+..++.++ ++|||+|++.+|.|.++.. .+...|. +++++++ +++++.+|++++++.++
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~~ 167 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA--------IFEAAGL--EVKTYPYYDAATKGLDFDAMLADLS 167 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH--------HHHHcCC--cEEEEeccccccCccCHHHHHHHHH
Confidence 568887 8888887665 5899999999998877642 3344554 5555555 33457899999999886
Q ss_pred hhC--CcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcccccc-ccCCCCC---C---cccEEEeCCCc
Q 013217 167 LFR--PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF---K---YCDVVTTTTHK 232 (447)
Q Consensus 167 ~~~--~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~-~~~~~~~---~---~~Di~~~s~~K 232 (447)
..+ ++++++++++||+ .. .+++|.++|++||+++++|+++ .++... +....++ . ..-++++|++|
T Consensus 168 ~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 246 (396)
T PRK09257 168 QAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAY-QGFGDGLEEDAYGLRAFAAAGLELLVASSFSK 246 (396)
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc-cccccchHHHHHHHHHHHhcCCcEEEEEEcCC
Confidence 433 3455557788886 33 3578889999999999999984 444432 1000111 1 12377899999
Q ss_pred ccC--CCCCceEEe--ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHh-----cChhHHHHHHHHHHHHHH
Q 013217 233 SLR--GPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNCRA 303 (447)
Q Consensus 233 ~l~--Gp~gG~i~~--~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~-----~~~~~~~~~~~~~~~~~~ 303 (447)
+++ |.|.||+++ .+. .....+...+....... .++++.....+++..+..- .....++..+++.++++.
T Consensus 247 ~~~~~GlRiG~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~ 324 (396)
T PRK09257 247 NFGLYGERVGALSVVAEDA-EEADRVLSQLKATIRTN-YSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQL 324 (396)
T ss_pred cCccccccceeEEEEeCCH-HHHHHHHHHHHHHhhhh-cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 873 889999974 221 00001222232221111 2223333222233233211 011234556777888888
Q ss_pred HHHHHHHCC----cEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCC
Q 013217 304 LASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 379 (447)
Q Consensus 304 l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~ 379 (447)
+.+.|++.+ +.+..+ ....++|+.+ +.+.+.+.+++.||.+. | .+ |+++...+
T Consensus 325 l~~~L~~~~~~~~~~~~~p-~gg~~~w~~l-----~~~~~~~l~~~~~V~~~----p--------~~-ri~~~~~~---- 381 (396)
T PRK09257 325 LVEALKAKGPSRDFDFIAR-QRGMFSYSGL-----TPEQVDRLREEFGVYAV----G--------SG-RINVAGLN---- 381 (396)
T ss_pred HHHHHHhcCCCCCcccccc-cceEEEecCC-----CHHHHHHHHHcCCEEEc----C--------CC-eEEEeeCC----
Confidence 999998854 444332 3456677765 34567777789999882 2 12 88875433
Q ss_pred CHHHHHHHHHHHHHHH
Q 013217 380 SEKEFVAIADFIHEGV 395 (447)
Q Consensus 380 ~~~di~~l~~~i~~~l 395 (447)
+++++++++.|++++
T Consensus 382 -~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 382 -ESNIDYVAEAIAAVL 396 (396)
T ss_pred -HHHHHHHHHHHHhhC
Confidence 789999999998753
No 208
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.85 E-value=6.2e-19 Score=176.34 Aligned_cols=343 Identities=13% Similarity=0.057 Sum_probs=198.9
Q ss_pred hcCeeEecCCCC-CC---HHHHHHHhhhhhcc-CC---CCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCcccee
Q 013217 20 FKSLELIASENF-TS---RAVMEAVGSCLTNK-YS---EGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVN 89 (447)
Q Consensus 20 ~~~i~l~~~~n~-~~---~~v~~a~~~~~~~~-~~---~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~ 89 (447)
...|+|..+... .+ +.+.+++...+... +. .+|+. ......+.+.+.+++.+.+|.+ ++ +
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~LR~aia~~~~~~~g~~v~~~----~ 99 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDG------PQGKDELIEALAALLNERYGWNISPQ----N 99 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCC------CCCCHHHHHHHHHHHHHHhCCCCChh----h
Confidence 345787654432 22 34566665544321 10 12332 2222345555556777766754 44 4
Q ss_pred eecCCcH-HHHHHHHHHhcC-----CCCEEEE-ecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHH
Q 013217 90 VQPLSGS-PANFEVYTAILK-----PHDRIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE 162 (447)
Q Consensus 90 v~~~sGs-~a~~~~~~al~~-----pgd~Vl~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 162 (447)
|.+|+|+ +++..++.++++ |||.|++ .+|.|+++...... .. ...+....+++++.+...+.+|+++++
T Consensus 100 I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~ 175 (416)
T PRK09440 100 IALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE---ED-LFVSYRPNIELLPEGQFKYHVDFEHLH 175 (416)
T ss_pred EEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc---cC-ceeecccccccccccccccCCCHHHcc
Confidence 5569998 888888888885 6999999 69988775421100 00 011111122232211113579999997
Q ss_pred HHhhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCC--C-CCcccEEEeCCCcc-
Q 013217 163 KTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P-FKYCDVVTTTTHKS- 233 (447)
Q Consensus 163 ~~~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~-~~~~Di~~~s~~K~- 233 (447)
+.. ++++++++.|+||+ ..+ +++|.++|+++|+++|+|+++... ........ + ....-+++.|++|+
T Consensus 176 --~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~~~~~~vI~~~SfSK~~ 251 (416)
T PRK09440 176 --IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATPLWNPNIILCMSLSKLG 251 (416)
T ss_pred --cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCccccCCeEEEecccccC
Confidence 343 78999998888886 444 578888999999999999997421 11000000 1 01123778999997
Q ss_pred cCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHH-----HHHHHHHHHHHHHHHH
Q 013217 234 LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV-----YQNKVVSNCRALASRL 308 (447)
Q Consensus 234 l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~-----~~~~~~~~~~~l~~~L 308 (447)
++|.|.||++.++ ++.+.+.........+.+...+ .+++.++.. ..+.+ ..+.+.++.+.+.+.|
T Consensus 252 ~pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~s~~~q-~~~~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L 321 (416)
T PRK09440 252 LPGVRCGIVIADE------EIIEALSNMNGIISLAPGRLGP-AIAAEMIES---GDLLRLSETVIRPFYRQKVQLAIALL 321 (416)
T ss_pred CCcceEEEEeCCH------HHHHHHHHHHHHhccCCCcHHH-HHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688889999887 6777766543322222222322 233334332 22321 2333455556666666
Q ss_pred HH----CCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCC--CC--CCCCeEEEecCccccCCCC
Q 013217 309 VE----LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SA--LVPGGIRIGSPAMTTRGFS 380 (447)
Q Consensus 309 ~~----~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~~--~~~~~iRig~~~~~~~g~~ 380 (447)
.+ .++.+..+ ..+.++|+++...+.+..++.+.|.++||.+..+...+.. .. ...+++||++.. +
T Consensus 322 ~~~l~~~~~~~~~p-~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~---- 394 (416)
T PRK09440 322 RRYLPDEPCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--D---- 394 (416)
T ss_pred HHhcccCCeEEecC-CCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC--C----
Confidence 55 23443332 3467788888653456678888888999999764322111 00 013589999752 3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013217 381 EKEFVAIADFIHEGVEI 397 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~~ 397 (447)
++++++..+.|++++..
T Consensus 395 ~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 395 DEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78999999999888764
No 209
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=9.8e-20 Score=178.90 Aligned_cols=214 Identities=19% Similarity=0.161 Sum_probs=150.2
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccc
Q 013217 59 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 138 (447)
Q Consensus 59 ~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 138 (447)
.+++...++| +.+++++|.+. .+.++||++|+..++.++++|||+|++..+.|++...... .+...
T Consensus 50 ~~np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~-----~~~~~ 115 (385)
T PRK08574 50 EENPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLK-----SLEKF 115 (385)
T ss_pred CCCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH-----Hhhcc
Confidence 3556677887 57899999864 2445889999999999999999999999988877532110 01122
Q ss_pred cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccC
Q 013217 139 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 216 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~ 216 (447)
|. ++..+ .+|++++++++++.+||+|++..++||+ ..|+++|.++|+++|+++++|++|+.|+...
T Consensus 116 g~--~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~--- 183 (385)
T PRK08574 116 GV--KVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYR--- 183 (385)
T ss_pred Cc--EEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 32 32221 2468999999876579999998888875 7899999999999999999999987775432
Q ss_pred CCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 217 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 217 ~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
|+. ++|++++|+||+++|+. ||+++++++ ++.+++...... .|.......+ +.+++.+. .+..
T Consensus 184 --~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-----~~~~~~~~~~~~--~g~~~~p~~a--~l~l~~l~--tL~~ 250 (385)
T PRK08574 184 --PLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG-----EFLEELWEWRRR--LGTIMQPFEA--YLVLRGLK--TLEV 250 (385)
T ss_pred --hhhhCCcEEEeeCceeecCCCCceeEEEEECcH-----HHHHHHHHHHHh--cCCCCCHHHH--HHHHcccC--cHHH
Confidence 232 58999999999998874 586666553 666655432211 1221112222 22344333 3667
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 013217 293 YQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~ 311 (447)
++++..+|+..+++.|++.
T Consensus 251 R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999873
No 210
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.85 E-value=5.6e-19 Score=175.33 Aligned_cols=316 Identities=18% Similarity=0.201 Sum_probs=191.3
Q ss_pred CCCCCHHHHHHHhhhhhccCCC-CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc
Q 013217 29 ENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 107 (447)
Q Consensus 29 ~n~~~~~v~~a~~~~~~~~~~~-g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~ 107 (447)
-.++|++|++++...+.+ |.. .|.-.....+ ...+.+| +.+++++|++.. +.++||+.|+..++. .+
T Consensus 90 ~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g-~r~~~le----~~lA~l~gae~a-----lvv~sg~aAi~l~l~-~l 157 (454)
T TIGR00474 90 RAPLAEEAIEAVTDAARG-YSNLEYDLETGKRG-SRYSHVE----GLLCELTGAEDA-----LVVNNNAAAVLLALN-TL 157 (454)
T ss_pred CCCCCHHHHHHHHHHHhc-ccchhccccccccc-hHHHHHH----HHHHHHhCCCcE-----EEECCHHHHHHHHHH-Hh
Confidence 346689999999887764 321 1110000011 2233444 789999999863 335889889887774 47
Q ss_pred CCCCEEEEecCCC---CcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCC---
Q 013217 108 KPHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--- 181 (447)
Q Consensus 108 ~pgd~Vl~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~--- 181 (447)
.+||+|++.+.+| ++.+... ..+...|. +++.++.+ ...|++++++++++ +|++|++.+++|+
T Consensus 158 ~~GdeVIvs~~e~v~~ggs~~i~-----~~~~~~G~--~~~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 158 AKGKEVIVSRGELVEIGGSFRIP-----DVMEQSGA--KLVEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRIV 226 (454)
T ss_pred CCcCEEEECCChhhhhcchhhHH-----HHHHHcCC--EEEEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCccccc
Confidence 8999999987663 3332211 12233454 55554432 34689999999987 8999887744433
Q ss_pred ---CCCChHHHHHHHHHhCCEEEEehhhhcccccc----ccCC-----CCCC-cccEEEeCCCcccCCCCCceEEeecCC
Q 013217 182 ---RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----SVVA-----DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 248 (447)
Q Consensus 182 ---~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~----~~~~-----~~~~-~~Di~~~s~~K~l~Gp~gG~i~~~~~~ 248 (447)
...|+++|+++|+++|+++++|.+ +|.+.. +... .+.. ++|++++|+||||+||.+|++++++
T Consensus 227 G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~-- 302 (454)
T TIGR00474 227 GFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK-- 302 (454)
T ss_pred CCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH--
Confidence 257999999999999999999974 454311 1111 1222 6999999999999999999999988
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChh-----------HHHHHHHHHHHHHHHHHHHHH---CCc-
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVE---LGY- 313 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~-----------~~~~~~~~~~~~~~l~~~L~~---~g~- 313 (447)
++.+++......... -..-..++++...++....+. .....+++.+++..+++.|++ .|+
T Consensus 303 ----~~i~~l~~~~l~r~l-r~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~ 377 (454)
T TIGR00474 303 ----ELIERLKKNPLTRAL-RVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFE 377 (454)
T ss_pred ----HHHHhhhhchhHHHH-hhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCce
Confidence 565554431100000 001112344444444433221 112345788899999999977 333
Q ss_pred -Eeee------CCC--CC--eeEEecCCCCCCCHHHHHHHHhhcC--eEEccCCCCCCCCCCCCCeEEEecCccccCCCC
Q 013217 314 -KLVS------GGS--DN--HLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 380 (447)
Q Consensus 314 -~~~~------~~~--~~--~~~~v~~~~~~~~~~~~~~~L~~~g--I~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~ 380 (447)
++.. +|+ .. .-.-+.+.+.+.+..++.+.|++.. |..+. ..+.+-+ .-|.+.
T Consensus 378 ~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~----------~~~~~~l-----d~r~~~ 442 (454)
T TIGR00474 378 LEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRI----------EDDRFLL-----DLRTLL 442 (454)
T ss_pred EEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEE-----EeCcCC
Confidence 3332 121 11 1123344455667889999998765 44421 1223443 335566
Q ss_pred HHHHHHHHHHH
Q 013217 381 EKEFVAIADFI 391 (447)
Q Consensus 381 ~~di~~l~~~i 391 (447)
++|++.+++.|
T Consensus 443 ~~~~~~~~~~~ 453 (454)
T TIGR00474 443 EDEEELLIEAL 453 (454)
T ss_pred HHHHHHHHHHh
Confidence 89999998875
No 211
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=1.4e-19 Score=179.34 Aligned_cols=224 Identities=18% Similarity=0.190 Sum_probs=156.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++...++| +++++++|.+.. +.++||++|+..++.++++|||+|++..+.|+++...... ...+..|
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~~-----l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~---~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEAA-----YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAH---FLPRKCN 141 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCeE-----EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHH---hhhhccC
Confidence 567778888 588999999862 3458889999999999999999999998877665311000 0001233
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++. .|++++++++++.+||+|++++++||+ ..|+++|.++|+++|+++++|++|. .+..
T Consensus 142 ~--~~~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~----- 207 (418)
T PLN02242 142 I--TTTFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVL----- 207 (418)
T ss_pred c--eEEEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCC-----
Confidence 2 3333222 389999999976359999999888876 7799999999999999999999974 3221
Q ss_pred CCCC-cccEEEeCCCcccCCC--C-CceEEeecCCcchhhHHHHhhhccCC--CCCCCCcHHHHHHHHHHHHHhcChhHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFK 291 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp--~-gG~i~~~~~~~~~~~~~~~i~~~~~~--~~~g~p~~~~~aal~~al~~~~~~~~~ 291 (447)
.+.. ++|++++|++|+++|+ + ||++++++ ++.+.+...... ...|.+...+.|++. + ..+ ..+.
T Consensus 208 ~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~------~li~~l~~~~~~~~~~~g~~~~~~~A~l~-~-~~l--~tl~ 277 (418)
T PLN02242 208 SPARLGADVVVHSISKFISGGADIIAGAVCGPA------ELVNSMMDLHHGALMLLGPTMNPKVAFEL-S-ERL--PHLS 277 (418)
T ss_pred CHHHcCCcEEEEeCccccCCCCCceEEEEEcCH------HHHHHHHHHhhhhhhccCCCCCHHHHHHH-H-cCC--CcHH
Confidence 1222 4899999999998654 3 69998877 666666543221 123433434444332 2 222 2456
Q ss_pred HHHHHHHHHHHHHHHHHHHCCcEeeeCC
Q 013217 292 VYQNKVVSNCRALASRLVELGYKLVSGG 319 (447)
Q Consensus 292 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 319 (447)
.++++..+|++.+++.|++.++++..++
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~~~V~yP~ 305 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELGLKVIYPG 305 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEECCC
Confidence 6788999999999999999888877543
No 212
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.85 E-value=4.7e-19 Score=174.48 Aligned_cols=310 Identities=14% Similarity=0.145 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhc--C-CCCEEEEecCCCCcccCCCccccccccccccc
Q 013217 65 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 140 (447)
Q Consensus 65 ~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~--~-pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (447)
-.+......++++++|++..+. .+.+++|| .++.+++.++- + +||+|+++...|.+.. +.+.+.|.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~--------kAi~~~G~ 173 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI--------KAISTAGF 173 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH--------HHHHHcCC
Confidence 3444445578999999983222 23346777 57777777763 2 6999999887654432 35567776
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEcCCC-CC-C-CCChHHHHHHHHHhCCEEEEehhhhcccccccc
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASA-YP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASV 215 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~~~~-~~-~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~ 215 (447)
...+++...+++++.+|+++|++++++. ++.+++++.++ ++ + ..|+++|.++|++||+++++|+||+.+......
T Consensus 174 ~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~ 253 (444)
T TIGR03531 174 EPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYME 253 (444)
T ss_pred eEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhh
Confidence 4444443245677899999999999862 33455555443 33 2 779999999999999999999998754322111
Q ss_pred C-CCCC--CcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHH
Q 013217 216 V-ADPF--KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 291 (447)
Q Consensus 216 ~-~~~~--~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~ 291 (447)
. ...+ +.+|++++|+||++..|.+ |+++++++ ++.+.+... .++.. .....+ .++.++..+...+++
T Consensus 254 ~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-----el~~~i~~~-y~g~~--~~s~~~-~~~~~ll~~G~~g~~ 324 (444)
T TIGR03531 254 LINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-----NFIQEISKS-YPGRA--SASPSL-DVLITLLSLGSKGYL 324 (444)
T ss_pred hhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-----HHHHHHHHh-ccCCC--CChHHH-HHHHHHHHhCHHHHH
Confidence 1 0112 2379999999999987655 66778664 677777654 23321 122222 234445555567889
Q ss_pred HHHHHHHHHHHHHHHHHHH----CCcEeeeCCCCCeeEE-ecCCCC-CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCC
Q 013217 292 VYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPG 365 (447)
Q Consensus 292 ~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~-v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 365 (447)
+++++..++++++.+.|.+ .|.+++.. +.|.+.+ +.+... +.+...+-..|...+|.-.....|++.......
T Consensus 325 ~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~-~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~ 403 (444)
T TIGR03531 325 ELLKERKEMYKYLKELLQKLAERHGERLLDT-PENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGC 403 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCcEeecC-CCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECCE
Confidence 9999999999999998876 46776642 2344322 233211 234556777776666642221123331111100
Q ss_pred eE-EEecC-------c---cccCCCCHHHHHHHHHHHHHH
Q 013217 366 GI-RIGSP-------A---MTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 366 ~i-Rig~~-------~---~~~~g~~~~di~~l~~~i~~~ 394 (447)
.+ -+|.+ + ....|++.+|++.+.+.|+++
T Consensus 404 ~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 404 EFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred EeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 11 11111 2 234589999999999988775
No 213
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.85 E-value=2e-19 Score=177.98 Aligned_cols=218 Identities=17% Similarity=0.186 Sum_probs=150.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +.+++++|+++ .+.++||+.|+..++.++++|||+|++..+.|++.+... ...+...|
T Consensus 63 ~~p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~----~~~~~~~G 129 (403)
T PRK07503 63 SNPTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL----HHGLGEFG 129 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH----HHHHhhCC
Confidence 345566777 57899999875 245689999999999999999999999988776543210 01122234
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
+++..++. .|++++++++++ +||+|++..++||+ ..|+++|.++|+++|+++++|++|+.+.. .
T Consensus 130 --~~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~ 195 (403)
T PRK07503 130 --VTVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----Q 195 (403)
T ss_pred --EEEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 34444333 378999999987 89999998777775 77999999999999999999999865532 1
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|++|+++|+. ||+++.++ ++.+++.........|.......++ .+++.+. .+..+
T Consensus 196 ~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~------~l~~~l~~~~~~~~~g~~~s~~~a~--l~l~~L~--tl~~r 265 (403)
T PRK07503 196 RPLELGADLVVHSATKYLGGHGDITAGLVVGGK------ALADRIRLEGLKDMTGAVMSPFDAF--LLMRGLK--TLALR 265 (403)
T ss_pred CchhhCCCEEEccccccccCCCceeEEEEEcCH------HHHHHHHhhhHHhCcCCCCCHHHHH--HHHcCcc--hHHHH
Confidence 2333 58999999999998753 68888655 6766665321111222222222222 2333332 35677
Q ss_pred HHHHHHHHHHHHHHHHHC-CcE
Q 013217 294 QNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
+++..+|+..+.+.|++. .+.
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 888899999999999883 443
No 214
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=9.5e-20 Score=179.95 Aligned_cols=217 Identities=18% Similarity=0.198 Sum_probs=151.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++...++| +.+++++|.+. .+.++||+.|+..++.++++|||+|++....|++.+... ...+...|
T Consensus 68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~----~~~~~~~G 134 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVC----NEILPRWG 134 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHH----HHHHHHcC
Confidence 445577787 57899999874 355699999999999999999999999887666543211 11122334
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++. .|++++++++++ ++++|++.+++||+ ..|+++|+++|+++|+++++|++|+.+...
T Consensus 135 ~--~v~~vd~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~----- 200 (403)
T PRK07810 135 V--ETVFVDG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ----- 200 (403)
T ss_pred c--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 3 4444332 489999999987 89999998887775 779999999999999999999998766442
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|++|+++|.. ||+++++++ .+.+++..... . .|.......++ .+++.+. .+..+
T Consensus 201 ~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-----~~~~~l~~~~~-~-~g~~~s~~~a~--l~l~~L~--tl~~R 269 (403)
T PRK07810 201 RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE-----YIDGPVQKLMR-H-TGPALSAFNAW--VLLKGLE--TLALR 269 (403)
T ss_pred ChhhcCCcEEEccCCceecCCcCceeEEEEeChH-----HHHHHHHHHHH-H-hCCCCCHHHHH--HHHhccC--cHHHH
Confidence 2333 68999999999997654 588888773 23333432211 1 12212222222 2344433 36778
Q ss_pred HHHHHHHHHHHHHHHHH-CCcE
Q 013217 294 QNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
+++..+++..+++.|++ +++.
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999987 3443
No 215
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=5.7e-19 Score=171.09 Aligned_cols=303 Identities=17% Similarity=0.145 Sum_probs=197.9
Q ss_pred hcCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC---CCCCccceeeecCC
Q 013217 20 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS 94 (447)
Q Consensus 20 ~~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g---~~~~~~~~~v~~~s 94 (447)
+..+.|..++|. +|+.+++++...+.......||.. ....+. +.+++.++ .+++ +|.+|+
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~-------~~~~Lr----~aia~~~~~~~~~~~----~i~it~ 83 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDS-------PDEELI----EKILSYLDTDFLSKN----NVSVGN 83 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-------ChHHHH----HHHHHHhCCCCCCcc----eEEEcC
Confidence 466899888885 478899988765533111112221 123444 34555555 6665 455689
Q ss_pred cH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 013217 95 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 173 (447)
Q Consensus 95 Gs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~kli 173 (447)
|+ +++..++.++ |+|++.+|.|.++.. .+...|. +++.++.++ ++.+|... + . ++++|
T Consensus 84 Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~~~~~----~-~-~~~~i 142 (335)
T PRK14808 84 GADEIIYVMMLMF----DRSVFFPPTYSCYRI--------FAKAVGA--KFLEVPLTK-DLRIPEVN----V-G-EGDVV 142 (335)
T ss_pred CHHHHHHHHHHHh----CcEEECCCCHHHHHH--------HHHHcCC--eEEEecCCC-cCCCChhH----c-c-CCCEE
Confidence 98 8888888777 789999988766532 3345565 555665653 35555332 2 2 57899
Q ss_pred EEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCcccC--CCCCceEEeecC
Q 013217 174 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLR--GPRGGMIFFKKD 247 (447)
Q Consensus 174 i~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l~--Gp~gG~i~~~~~ 247 (447)
+++.++||+ ..+.+++.+++ ++++++++|+++. .+.... ....+. ..-+++.|++|+++ |.|.|++++++
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~-~f~~~~-~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~- 218 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYY-EFHGES-YVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE- 218 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchh-hhcCCc-hHHHHHhCCCEEEEEechhhccCcccceEEEEeCH-
Confidence 999899986 77889999998 5799999999963 332111 111111 12377899999874 88889999987
Q ss_pred CcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEe
Q 013217 248 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 327 (447)
Q Consensus 248 ~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v 327 (447)
++.+.+.....+. +. +.....+...++... ..+++..+.+.++++.+.+.|.+.|+++..+ +..++|+
T Consensus 219 -----~~~~~l~~~~~~~--~~-~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~g~f~~~ 286 (335)
T PRK14808 219 -----KFIDAYNRVRLPF--NV-SYVSQMFAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFI 286 (335)
T ss_pred -----HHHHHHHHhcCCC--CC-CHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEECCC--CCeEEEE
Confidence 7777776544332 22 222223334455421 2346667777888888999999888876543 3456677
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+.. .+..++.+.|.++||.|+.. ..++||+... .++++++.++|++
T Consensus 287 ~l~~--~~~~~~~~~l~~~Gi~V~~~----------~~~~Risi~~-------~~~~~~~~~~l~~ 333 (335)
T PRK14808 287 FMEK--EEKERLLEHLRAKNIAVRSF----------REGVRITIGK-------REENDMILKELEV 333 (335)
T ss_pred eCCC--ccHHHHHHHHHHCCeEEEEC----------CCCeEEecCC-------HHHHHHHHHHHHh
Confidence 7652 34577888999999999731 2479998543 7899999988864
No 216
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=2.5e-19 Score=173.53 Aligned_cols=301 Identities=13% Similarity=0.074 Sum_probs=191.9
Q ss_pred cCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHH
Q 013217 21 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 99 (447)
Q Consensus 21 ~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~ 99 (447)
+.|.|..+||+..+ .. ..++ ||.. . .+++. +.+++.+|.++. +|.+++|+ +++
T Consensus 17 ~~i~l~~Nenp~~~-----~~--~~~~----Yp~~------~-~~~lr----~~ia~~~~~~~~----~I~it~Gs~~~l 70 (332)
T PRK06425 17 RIIDFSANINDFMD-----IG--DISI----YPEI------S-YTDIE----DQIKIYTQGLKI----KVLIGPGLTHFI 70 (332)
T ss_pred CEEEeccccCCCcC-----hh--hccc----CcCc------C-HHHHH----HHHHHHhCCCcc----eEEECCCHHHHH
Confidence 45899999998741 00 0122 3332 1 23343 578889999875 45669998 787
Q ss_pred HHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 013217 100 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 179 (447)
Q Consensus 100 ~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~ 179 (447)
..++. +++||+ |++.+|.|+.+. ..+...|. ++++++++. ..+|.+.++ ..++|+|+++.|+
T Consensus 71 ~~~~~-~~~~~~-vv~~~P~y~~y~--------~~~~~~G~--~v~~vp~~~--~~~~~~~l~----~~~~k~v~l~nP~ 132 (332)
T PRK06425 71 YRLLS-YINVGN-IIIVEPNFNEYK--------GYAFTHGI--RISALPFNL--INNNPEILN----NYNFDLIFIVSPD 132 (332)
T ss_pred HHHHH-HhCCCc-EEEeCCChHHHH--------HHHHHcCC--eEEEEeCCc--ccCcHHHHh----hcCCCEEEEeCCC
Confidence 77775 578875 666687766543 23345565 555555652 345655544 2389999998889
Q ss_pred CCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---Cc--ccEEEeCCCccc--CCCCCceEEeecC
Q 013217 180 YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRGGMIFFKKD 247 (447)
Q Consensus 180 ~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~~--~Di~~~s~~K~l--~Gp~gG~i~~~~~ 247 (447)
||+ ..+ +++|.++|+++|+++|+|+++ ..+...+ .++.. +. --+++.|++|++ +|.|.||++.++
T Consensus 133 NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y-~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~- 209 (332)
T PRK06425 133 NPLGNLISRDSLLTISEICRKKGALLFIDEAF-IDFVPNR-AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD- 209 (332)
T ss_pred CCcCCccCHHHHHHHHHHHHHcCCEEEEecch-hcccccc-chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH-
Confidence 986 555 567777889999999999984 4443322 11111 11 237789999975 588889999987
Q ss_pred CcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEE
Q 013217 248 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 326 (447)
Q Consensus 248 ~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 326 (447)
++.+.+.....+... +..... ++.......+ ++..+.+.++++.+.+.|.+.|+++..++ ...++|
T Consensus 210 -----~li~~l~~~~~~~~~---~~~~~~----~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~-~g~f~~ 276 (332)
T PRK06425 210 -----YNMKISRKITEPWSV---CDPAID----FIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDP-SANFIT 276 (332)
T ss_pred -----HHHHHHHHcCCCCcc---CHHHHH----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC-CceEEE
Confidence 777777664333211 111111 1221111222 45577788888999999998888775432 344567
Q ss_pred ecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+.+. +..++.+.|.++||.+..+...+ ...++++|+++. + .++++++.++|++++
T Consensus 277 ~~~~----~~~~~~~~l~~~gi~v~~~~~f~---~~~~~~iRis~~---~----~~~~~~l~~al~~~~ 331 (332)
T PRK06425 277 FMIP----DAHDFYSYLLKNGILVRLLDDYE---CLGEQYIRIAIR---R----RSFNIKLVNALRNFL 331 (332)
T ss_pred EEcC----CHHHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEeC---C----HHHHHHHHHHHHHHh
Confidence 7663 46778888888999996542111 112468999864 3 789999999998765
No 217
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.85 E-value=2.6e-19 Score=180.65 Aligned_cols=306 Identities=17% Similarity=0.145 Sum_probs=190.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCCC------------CccceeeecCCcHHHHHHHHHHh----cC-----------------
Q 013217 62 EYIDELETLCQKRALAAFNLDE------------NKWGVNVQPLSGSPANFEVYTAI----LK----------------- 108 (447)
Q Consensus 62 ~~~~~le~~~~~~~~~~~g~~~------------~~~~~~v~~~sGs~a~~~~~~al----~~----------------- 108 (447)
+...++|+.+.+|++++++..+ ..+ -+.+++||.||+.++.+- +.
T Consensus 125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~--G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSL--GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCC--eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 3456899999999999985321 122 233456678988876653 11
Q ss_pred -----CCCEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCCCCCCHHHHHHHhhh---hCCcEEEEc---
Q 013217 109 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAG--- 176 (447)
Q Consensus 109 -----pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~id~~~l~~~~~~---~~~klii~~--- 176 (447)
++..|++++.+|.+.. +.+...|.+ .+++.+++| +++.+|+++|++++++ .+++.+++.
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~--------kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLG--------KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred hhccCCceEEEECCCchHHHH--------HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 2346777766665542 223344432 144555676 5689999999998863 244444333
Q ss_pred CC-CCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCC---CCCCcccEEEeCCCcccCCCCC-ceEEeecCCcch
Q 013217 177 AS-AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 251 (447)
Q Consensus 177 ~~-~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~---~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~ 251 (447)
.+ ..+...|+++|+++|+++|+|+++|+||+.+.+..+.+. ..+..+|.+++++|||+.+|.| |+++++++
T Consensus 274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~---- 349 (522)
T TIGR03799 274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP---- 349 (522)
T ss_pred cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH----
Confidence 12 233388999999999999999999999876554333111 1123589999999999999999 99999874
Q ss_pred hhHHHHhhhc---c---------CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeC
Q 013217 252 VELESAINNA---V---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG 318 (447)
Q Consensus 252 ~~~~~~i~~~---~---------~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~ 318 (447)
.+.+.+... . ..+..|+.+... ..++.+++.+...++++..++..+.++++.+.|.+ .+++++.+
T Consensus 350 -~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 350 -ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE 427 (522)
T ss_pred -HHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC
Confidence 333332220 0 011234444433 35888999988889999999999999999999987 68999875
Q ss_pred CCCCeeEEecCCCCCCC--------------H-------HHHHHHHhhcCeE-EccCCCCCCC-CCCCCCeEEEecC-cc
Q 013217 319 GSDNHLVLVDLRPMGID--------------G-------ARVEKILDMASIT-LNKNSVPGDK-SALVPGGIRIGSP-AM 374 (447)
Q Consensus 319 ~~~~~~~~v~~~~~~~~--------------~-------~~~~~~L~~~gI~-v~~~~~p~~~-~~~~~~~iRig~~-~~ 374 (447)
+. -.++.+.+.+.++. . ..+.+.+.+.|.. ++...+.... .......+|+.+. ..
T Consensus 428 p~-l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~ 506 (522)
T TIGR03799 428 PE-LCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPL 506 (522)
T ss_pred CC-ccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCC
Confidence 32 33333333332210 0 2355555666654 3322111100 0011235999753 44
Q ss_pred ccCCCCHHHHHHHHH
Q 013217 375 TTRGFSEKEFVAIAD 389 (447)
Q Consensus 375 ~~~g~~~~di~~l~~ 389 (447)
|+ ++|++.+.+
T Consensus 507 tt----~~~i~~~l~ 517 (522)
T TIGR03799 507 TT----HEILQDILD 517 (522)
T ss_pred CC----HHHHHHHHH
Confidence 55 888887654
No 218
>PLN02263 serine decarboxylase
Probab=99.85 E-value=6.8e-18 Score=165.96 Aligned_cols=290 Identities=13% Similarity=0.062 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-ccceeeecCCcHHHHHHHHHHhcC--CCCEEEEecCCCCcccCCCccccccccccccc
Q 013217 64 IDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 140 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g~~~~-~~~~~v~~~sGs~a~~~~~~al~~--pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (447)
..++|+.+.+|+++++|.+++ .|+ +.+++||++|+.++.+-.+ +...++++.-.|.+. .+.+.+.|.
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv--------~KAa~llgi 200 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--------FKAARMYRM 200 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHH--------HHHHHhcCC
Confidence 568999999999999999864 454 2346667999888776532 334555555444332 145566676
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhC--CcEEEEcC--CCCCCCCChHHHHHHHHHhCC-----EEEEehhhhcccc
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGA--SAYPRDFDYPRMRQIADAVGA-----LLMMDMAHISGLV 211 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~~--~klii~~~--~~~~~~~~~~~i~~ia~~~g~-----~livD~a~~~g~~ 211 (447)
. ++.++++ +++.+|+++|++++.+.. |-+|+.+. ...+...|+++|.++|+++|+ |++||+|.+...+
T Consensus 201 ~--~~~Vp~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~l 277 (470)
T PLN02263 201 E--CVKVDTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMM 277 (470)
T ss_pred c--ceEeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHh
Confidence 4 4445566 578999999999987633 55565552 223337899999999999997 9999999533333
Q ss_pred ccccCCCCCC---cccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhh------ccCCCCCCCCcHHHHHHHHHH
Q 013217 212 AASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN------AVFPGLQGGPHNHTIGGLAVC 281 (447)
Q Consensus 212 ~~~~~~~~~~---~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~------~~~~~~~g~p~~~~~aal~~a 281 (447)
+.-....+++ .+|.++.++|||+..|.+ |+++++++ ..+.+.. ...++..|+-+....+.++..
T Consensus 278 Pf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~ 351 (470)
T PLN02263 278 PFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYT 351 (470)
T ss_pred hhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHH
Confidence 2111111232 389999999999999988 99999973 3222211 112344566555556778888
Q ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCC
Q 013217 282 LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA 361 (447)
Q Consensus 282 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~ 361 (447)
++.....++.+.+++..++++++.+.|++.|+..+..+ .... +.++... .+ +...|..++..
T Consensus 352 L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p-~s~~--V~f~~p~---~~----~~~~gW~L~~~-------- 413 (470)
T PLN02263 352 LNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNE-LSST--VVFERPK---DE----EFVRRWQLACQ-------- 413 (470)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCC-CceE--EEEecCc---hH----HhhcceEEccC--------
Confidence 99888889999999999999999999999998877643 2332 3333211 11 12356665421
Q ss_pred CCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 362 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 362 ~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+..+++.+..-.+ .+-++++.+-|++...
T Consensus 414 --~~~~Hivvmphv~----~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 414 --GNIAHVVVMPSVT----IEKLDYFLKELVEKRS 442 (470)
T ss_pred --CCcEEEEEcCCCC----HHHHHHHHHHHHHHHh
Confidence 2358887665444 7888888887776655
No 219
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.85 E-value=1.7e-19 Score=175.72 Aligned_cols=226 Identities=17% Similarity=0.219 Sum_probs=153.1
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
+|...|+ +++...++| ++++++.|.+. .+.++||++|+.+++ .+++|||+|+++.+.|++.... + .
T Consensus 45 ~~~Y~R~--~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~-~-~ 110 (364)
T PRK07269 45 GFDYTRT--KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRW-F-N 110 (364)
T ss_pred CcceeCC--CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHH-H-H
Confidence 3444443 456677888 57888888764 244578889998888 4679999999998777654310 0 0
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
.....+ .+. + ++..|++++++++++ +||+|++++++||+ ..|+++|+++|+++|+++++|++++.
T Consensus 111 ---~~~~~~-~~~-----~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~ 177 (364)
T PRK07269 111 ---QQEKEG-RFH-----F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS 177 (364)
T ss_pred ---HHHhcC-cEE-----E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 000000 011 1 234689999999987 89999999888886 67999999999999999999999755
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
+.. ..|++ ++|++++|+||+++|+. ||+++++++ ++.+++..... ..|......-+ +.+++.
T Consensus 178 ~~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-----~l~~~~~~~~~--~~G~~~s~~~a--~l~~~~ 243 (364)
T PRK07269 178 PIY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL-----ELYEKLFYNLN--TTGAVLSPFDS--YLLMRG 243 (364)
T ss_pred ccc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcH-----HHHHHHHHHHH--HhCCCCCHHHH--HHHHcC
Confidence 432 24454 69999999999998865 688888764 66666653221 11211111122 223444
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHHC-Cc-EeeeCC
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVEL-GY-KLVSGG 319 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~ 319 (447)
+. .+..++++..+|+..+++.|++. ++ +++.++
T Consensus 244 L~--tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg 278 (364)
T PRK07269 244 LK--TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG 278 (364)
T ss_pred CC--cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC
Confidence 43 36778999999999999999884 44 444343
No 220
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.85 E-value=3.2e-19 Score=175.08 Aligned_cols=215 Identities=21% Similarity=0.198 Sum_probs=151.5
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +++++++|.+. .+.++||++|+..++.++++|||+|++..+.|++...... ..+...|
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 104 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFE----RLLPKLG 104 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHH----HHHhhcC
Confidence 556677887 57888999764 2445899999999999999999999999988776531100 0111233
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. ++..++. -|++++++++++ ++++|++.+++||. ..|+++|.++|+++|+++++|++|+.+.. .
T Consensus 105 ~--~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-----~ 170 (369)
T cd00614 105 I--EVTFVDP------DDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-----Q 170 (369)
T ss_pred e--EEEEeCC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----C
Confidence 3 4444333 268999999977 89999998777775 77999999999999999999999876643 2
Q ss_pred CCCC-cccEEEeCCCcccCCC---CCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp---~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|++|+++|+ +||+++++++ ++.+++...... ..++.+.. .+ +.+++.+. .+..+
T Consensus 171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-----~l~~~l~~~~~~-~g~~~~p~-~a--~~~l~~l~--tl~~r 239 (369)
T cd00614 171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-----ALIQRLRFLRLA-LGTILSPF-DA--WLLLRGLK--TLPLR 239 (369)
T ss_pred ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-----HHHHHHHHHHHh-hCCCCCHH-HH--HHHHcCCC--CHHHH
Confidence 3343 5899999999999875 4799998763 465655543211 11122222 11 22333332 35667
Q ss_pred HHHHHHHHHHHHHHHHHCC
Q 013217 294 QNKVVSNCRALASRLVELG 312 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~~g 312 (447)
+++..+|++.+++.|++.+
T Consensus 240 ~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 240 MERHSENALKVAEFLEKHP 258 (369)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 8999999999999998853
No 221
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=2.4e-19 Score=176.70 Aligned_cols=298 Identities=16% Similarity=0.067 Sum_probs=188.8
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
+|...|| +++....+| +++++++|.+. .+.+.||++|+.+++.++++|||+|++.++.|++......
T Consensus 56 ~~~Y~r~--~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~-- 122 (394)
T PRK07050 56 QWRYGLH--ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE-- 122 (394)
T ss_pred CcccCCC--CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH--
Confidence 3444443 556677777 57889999764 2344777899999999999999999999998876532110
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
......|. ++..++. .|.+++++++++ +||+|+++.++||. ..|+++|.++|+++|+++++|++|..
T Consensus 123 --~~~~~~Gi--~v~~vd~------~~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~ 191 (394)
T PRK07050 123 --WLARDFGI--TVRFYDP------LIGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSA 191 (394)
T ss_pred --HHHHhcCe--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccc
Confidence 01122343 4444332 145788888877 89999998888775 67999999999999999999999877
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCC---CCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp---~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
|... .|+. ++|+++.|++|++.|. .||+++++++ ++.+++........ ++... ..+ ..+++.
T Consensus 192 ~~~~-----~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-----~~~~~~~~~~~~~G-~~~~~--~~a-~l~lr~ 257 (394)
T PRK07050 192 GLAF-----KPFEHGVDISVQALTKYQSGGSDVLMGATITADA-----ELHAKLKLARMRLG-IGVSA--DDC-SLVLRG 257 (394)
T ss_pred cccc-----CHHHcCCeEEEEECCceecCCCCeeEEEEEECCH-----HHHHHHHHHHHhcC-CCCCH--HHH-HHHHcC
Confidence 6542 2333 5899999999999754 3687877664 67776654322111 11121 111 234443
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHH-CCcE-eeeCC---------------CCCeeEEecCCCCCC---CHHHHHHHHh
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVE-LGYK-LVSGG---------------SDNHLVLVDLRPMGI---DGARVEKILD 344 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~-~~~~~---------------~~~~~~~v~~~~~~~---~~~~~~~~L~ 344 (447)
+. .+..++++..+++..+++.|++ +++. +..++ ...+++.+.+.. +. +..++.+.|+
T Consensus 258 l~--tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~-~~~~~~~~~~~~~l~ 334 (394)
T PRK07050 258 LP--SLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE-RYSPAQVDAFVEALE 334 (394)
T ss_pred CC--cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-CCCHHHHHHHHHcCC
Confidence 33 3666889999999999999987 3443 22111 012333344432 11 2344555666
Q ss_pred hcCeEEccCC-----CCCCC-------CCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 345 MASITLNKNS-----VPGDK-------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 345 ~~gI~v~~~~-----~p~~~-------~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
..++.++.+. .|... .+..++-||+|.+ -||.+.|.+-|.+++..
T Consensus 335 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svG--------lE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 335 LFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIG--------LEDEADLIADLEQALEA 391 (394)
T ss_pred CCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeC--------cCCHHHHHHHHHHHHHH
Confidence 6677666532 12210 0112246899876 35666677777666653
No 222
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.84 E-value=2.6e-19 Score=176.12 Aligned_cols=220 Identities=22% Similarity=0.252 Sum_probs=151.4
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
++...|| +++....+| +.+++++|++. .+.++||+.|+.+++.+++++||+|++..+.|++.+....
T Consensus 45 ~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~-- 111 (380)
T TIGR01325 45 GFVYSRY--ANPTVAAFE----ERIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFIS-- 111 (380)
T ss_pred CcceecC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHH--
Confidence 4444454 345566776 57889999864 2446899999999999999999999998877766432110
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
..+...|. ++..++. .|++++++++++ +|++|+++.++||. ..|+++|.++|+++|+++++|+++..
T Consensus 112 --~~~~~~g~--~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 112 --EILPRFGI--EVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred --HHHHHhCC--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 11122343 4444332 278999998876 89999998887775 77999999999999999999999865
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
+.. ..|+. ++|++++|+||+++|+. ||+++.++ ++.+.+....... |.......+ +.+++.
T Consensus 181 ~~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~------~~~~~l~~~~~~~--g~~~~p~~a--~~~l~~ 245 (380)
T TIGR01325 181 PVL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSE------ELMAEVAVYLRHT--GPAMSPFNA--WVLLKG 245 (380)
T ss_pred ccc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCH------HHHHHHHHHHHhh--CCCCCHHHH--HHHHhc
Confidence 432 22343 58999999999998753 48888777 5666555432211 221111111 223443
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHHC
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (447)
+. .+..++++..++++.+++.|++.
T Consensus 246 l~--tl~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 246 LE--TLSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred cC--cHHHHHHHHHHHHHHHHHHHHcC
Confidence 32 35667899999999999999884
No 223
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.84 E-value=5.7e-19 Score=175.70 Aligned_cols=289 Identities=17% Similarity=0.217 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCccceeeecCCcH-HHHHHHH---HHhcCCCCEEEEecCCCCcccCCCcccccccccc
Q 013217 64 IDELETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVY---TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 137 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g--~~~~~~~~~v~~~sGs-~a~~~~~---~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 137 (447)
..++.+.+.+++.+..+ ++++++ .+..++|+ +|+..++ .++++|||+|++.+|.|+++.. .+..
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~~v--~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~ 143 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEKRI--ATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN--------IFKS 143 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccCeE--EEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHH
Confidence 34454444455544333 344432 11124454 6666554 4678999999999998877642 3345
Q ss_pred ccceeEEEecccC-CCCCCCCHHHHHHHhhhh--CCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 138 TSIYFESMPYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 138 ~g~~~~~~~~~~~-~~~~~id~~~l~~~~~~~--~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
.|. +++++++. ++++.+|++.+++.++.. ++++++++.++||+ .. .+++|.++|++||+++++|+++ .+
T Consensus 144 ~G~--~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~ 220 (404)
T PTZ00376 144 AGL--NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAY-QG 220 (404)
T ss_pred cCC--ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhh-cC
Confidence 554 55566663 245789999999988642 34667778888886 33 4578888999999999999984 45
Q ss_pred cccccc--CCCCC---C-c--ccEEEeCCCccc--CCCCCceEE---eecCCcchhhHHHHh----hhccCCCCCCCCcH
Q 013217 210 LVAASV--VADPF---K-Y--CDVVTTTTHKSL--RGPRGGMIF---FKKDPVLGVELESAI----NNAVFPGLQGGPHN 272 (447)
Q Consensus 210 ~~~~~~--~~~~~---~-~--~Di~~~s~~K~l--~Gp~gG~i~---~~~~~~~~~~~~~~i----~~~~~~~~~g~p~~ 272 (447)
+.+.+. ...++ . . .-+++.|++|++ +|+|.||++ .++ ++.+.+ ....... .++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~ 293 (404)
T PTZ00376 221 FASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANK------EEAANVLSQLKLIIRPM-YSSPPI 293 (404)
T ss_pred ccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCH------HHHHHHHHHHHHHHhhh-cCCCch
Confidence 544321 00001 1 1 237889999986 489999984 343 443332 2211111 122232
Q ss_pred HHHHHHHHHHHHhc--C---hhHHHHHHHHHHHHHHHHHHHHHCC----cEeeeCCCCCeeEEecCCCCCCCHHHHHHHH
Q 013217 273 HTIGGLAVCLKHAQ--S---PEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKIL 343 (447)
Q Consensus 273 ~~~aal~~al~~~~--~---~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L 343 (447)
....+...+++.-. . ...++..+++.++++.+.+.|.+.+ +.+..+ ..+.++|+.+. .+.+..++
T Consensus 294 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p-~gg~f~~~~~~-----~~~~~~L~ 367 (404)
T PTZ00376 294 HGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN-QIGMFSFTGLT-----KEQVERLI 367 (404)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc-CceEEEecCCC-----HHHHHHHH
Confidence 22223333342210 0 0123345567788888999998864 333322 34566677652 34445555
Q ss_pred hhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 344 DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 344 ~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+++||.+ +|+ + |+++... +.++++++++.|++++.
T Consensus 368 ~~~~v~v----~p~--------~-Ris~~~~-----~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 368 EKYHIYL----LDN--------G-RISVAGL-----TSKNVDYVAEAIHDVVR 402 (404)
T ss_pred HhCCEee----cCC--------C-eEEEecc-----CHHhHHHHHHHHHHHHh
Confidence 6679998 342 2 8886433 37999999999998875
No 224
>PLN02397 aspartate transaminase
Probab=99.84 E-value=5.9e-19 Score=176.19 Aligned_cols=265 Identities=20% Similarity=0.237 Sum_probs=167.1
Q ss_pred cCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEeccc-CCCCCCCCHHHHHHHhhh--h
Q 013217 92 PLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAIL--F 168 (447)
Q Consensus 92 ~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~id~~~l~~~~~~--~ 168 (447)
.++|+.++...+.+++.|||+|++.+|.|+.+.. .+...|. +++++++ +++++.+|++.+++.+.. .
T Consensus 124 ~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~v~l~~~~~~~~d~~~l~~~l~~~~~ 193 (423)
T PLN02397 124 SGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN--------IFRDAGV--PVRTYRYYDPKTRGLDFDGLLEDLKAAPD 193 (423)
T ss_pred cchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------HHHHcCC--eEEEeecccCcCCccCHHHHHHHHHhCCC
Confidence 3444444555666667799999999998877642 2345554 5555555 234578999999887763 2
Q ss_pred CCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcccccccc---CCC--CCC--c-ccEEEeCCCccc-
Q 013217 169 RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV---VAD--PFK--Y-CDVVTTTTHKSL- 234 (447)
Q Consensus 169 ~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~---~~~--~~~--~-~Di~~~s~~K~l- 234 (447)
++++++++.++||+ .. .+++|.++|++||+++|+|+++ .++.+.+. .+. .+. + .-+++.|++|++
T Consensus 194 ~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~ 272 (423)
T PLN02397 194 GSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY-QGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMG 272 (423)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc-CCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCC
Confidence 56777778888886 43 4578888999999999999994 66654321 111 011 1 136789999996
Q ss_pred -CCCCCceEE--eecCCcchhhHHH----HhhhccCCCCCCCCcHHHHHHHHHHHHHh--cC---hhHHHHHHHHHHHHH
Q 013217 235 -RGPRGGMIF--FKKDPVLGVELES----AINNAVFPGLQGGPHNHTIGGLAVCLKHA--QS---PEFKVYQNKVVSNCR 302 (447)
Q Consensus 235 -~Gp~gG~i~--~~~~~~~~~~~~~----~i~~~~~~~~~g~p~~~~~aal~~al~~~--~~---~~~~~~~~~~~~~~~ 302 (447)
+|+|.||++ ..+. ++.+ .+.........+ ++.....+.+.++..- .. ..+++..+++.++++
T Consensus 273 ~~G~RvG~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~ 346 (423)
T PLN02397 273 LYGERVGALSVVCKSA-----DVAVRVKSQLKLIARPMYSN-PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQ 346 (423)
T ss_pred CccccceEEEEEeCCH-----HHHHHHHHHHHHHHhcccCC-CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 499999985 3221 3322 232222111222 2322223333233210 00 113556678888999
Q ss_pred HHHHHHHHCC----cEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCC
Q 013217 303 ALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 378 (447)
Q Consensus 303 ~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g 378 (447)
.+.+.|++.| +++..+ ...++.|+++. .+.+.++|+++||.+.. ++ |+++...
T Consensus 347 ~l~~~L~~~~~~~~~~~~~p-~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~------------~~-Ri~~~~~---- 403 (423)
T PLN02397 347 KLYDALEARGSPGDWSHITK-QIGMFSFTGLN-----KEQVDRMTKEYHIYMTR------------DG-RISMAGL---- 403 (423)
T ss_pred HHHHHHHhcCCCCCCCcccC-CceEEEecCCC-----HHHHHHHHHhCCEEECC------------CC-eEEEeeC----
Confidence 9999999876 654433 35677777763 35566667889999831 13 8876433
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 013217 379 FSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 379 ~~~~di~~l~~~i~~~l~~ 397 (447)
++++++++++.|++++.+
T Consensus 404 -~~~~i~~~~~~i~~~~~~ 421 (423)
T PLN02397 404 -SSKNVPYLADAIHAVVTN 421 (423)
T ss_pred -CHHHHHHHHHHHHHHHhc
Confidence 378999999999999863
No 225
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=3.4e-19 Score=176.82 Aligned_cols=191 Identities=17% Similarity=0.161 Sum_probs=132.0
Q ss_pred EecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHH
Q 013217 25 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 104 (447)
Q Consensus 25 l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~ 104 (447)
+..+.+|..+.+.+++... ..+ ..+|...|+ +++..+.+| +.+++++|.+. .|.++||+.|+.+++.
T Consensus 36 i~~sstf~~~~~~~~~~~~-~~~-~~~~~Y~r~--~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al~ 102 (437)
T PRK05613 36 IYQTTSYVFDSAEHAKQRF-ALE-DLGPIYSRL--TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAIL 102 (437)
T ss_pred EeCCCCcccCCHHHHHHhh-ccc-cCCceeeCc--cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHH
Confidence 4455566656665554322 111 123333332 456667777 68889999864 4556999999999999
Q ss_pred HhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--
Q 013217 105 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-- 182 (447)
Q Consensus 105 al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-- 182 (447)
+++++||+|++++..|++...... ..+...| +++..++ ++ .|++++++++++ +|++|++..+.|+.
T Consensus 103 ~ll~~Gd~VI~~~~~y~~t~~~~~----~~l~~~G--i~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 103 NLAGAGDHIVTSPRLYGGTETLFL----VTLNRLG--IEVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANPQAD 170 (437)
T ss_pred HhcCCCCEEEECCCccHHHHHHHH----HHHHhcC--eEEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCc
Confidence 999999999999888887632110 0112234 3555543 21 289999999987 89998887655553
Q ss_pred CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEee
Q 013217 183 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 245 (447)
Q Consensus 183 ~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~ 245 (447)
..|+++|+++|+++|+++++|++|+.|... .|+. ++|++++|+||+++|+. ||+++.+
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~-----~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~ 232 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALV-----RPLELGADVVVASLTKFYTGNGSGLGGVLIDG 232 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCcccccc-----ChHHhCCCEEEeeccceecCCCcceeEEEEec
Confidence 789999999999999999999998776542 2333 69999999999997764 4666644
No 226
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=5.5e-19 Score=172.80 Aligned_cols=212 Identities=15% Similarity=0.115 Sum_probs=146.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +.++++.|.+. .+.++||++|+.+++.++++|||+|+++++.|++...... ..+...|
T Consensus 59 ~npt~~~Le----~~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~----~~l~~~G 125 (394)
T PRK09028 59 GTPTHFAFQ----AAIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCD----KILKGFG 125 (394)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH----Hhhhhcc
Confidence 344456776 56777777653 2345788899999999999999999999988866532100 0111223
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. ++..++. .|.+++++++++ +||+|++++++||+ ..|+++|+++|+++|+++++|++|+.+.. .
T Consensus 126 i--~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~ 191 (394)
T PRK09028 126 I--ETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----S 191 (394)
T ss_pred e--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 2 3333221 256889988877 89999999888886 77999999999999999999999876532 3
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhcc-CCCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~-~~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
.|+. ++|+++.|+|||++|+. +|+++.++ ++.+++.... ..|. ..+... .+..++.+.+ +.-
T Consensus 192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~------~~~~~l~~~~~~~G~--~~~p~~---a~l~~rgl~T--L~l 258 (394)
T PRK09028 192 RPFEMGVDISIQAATKYIVGHSDVMLGTATANE------KHWDQLREHSYLMGQ--CTSPDD---VYLAMRGLRT--LGV 258 (394)
T ss_pred CccccCceEEEEeCCeEecCCCCEEEEEEECCH------HHHHHHHHHHHhcCC--CCCHHH---HHHHHcccCc--HHH
Confidence 3455 69999999999999985 37665554 5555554321 1121 122221 1223444433 567
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 013217 293 YQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~ 311 (447)
++++..+|+..+++.|++.
T Consensus 259 R~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 259 RLAQHEKNALKVANWLATR 277 (394)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999984
No 227
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-18 Score=168.31 Aligned_cols=307 Identities=17% Similarity=0.114 Sum_probs=198.3
Q ss_pred cCeeEecCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-H
Q 013217 21 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 97 (447)
Q Consensus 21 ~~i~l~~~~n~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~ 97 (447)
+.+.|..++|+ .|+.+++++.+.+......+||.. | ...++ +.+++++|++++ +|.+++|+ +
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----g---~~~lr----~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHI----T---SDPLR----EAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCC----C---HHHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence 45788878875 468889888776643212234321 1 23343 567788888875 45568887 7
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 98 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
++..++..+ +||+|++.+|.|+.+. ......|. ++++++++ +++.+|++++++.. . ++++++++.
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~-~-~~~~v~~~~ 148 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPPTFGMYS--------FYAKLNGI--PVIDVPLK-EDFTIDGERIAEKA-K-NASAVFICS 148 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCCChHHHH--------HHHHHcCC--eEEEeecC-CCCCcCHHHHHHhc-c-CCCEEEEeC
Confidence 776666555 7999999998876431 11233444 55566665 34689999998865 3 788988888
Q ss_pred CCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCccc--CCCCCceEEeecCCcch
Q 013217 178 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 251 (447)
Q Consensus 178 ~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~ 251 (447)
++||+ ..+.++|.++++ +|+++++|+++. .+..... ...+. .--+++.|++|++ +|.|.||+++++
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~~~~-~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~----- 220 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSGKSL-IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE----- 220 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhcccch-HHHHhhCCCEEEEecchHhhcchhhhheeeecCH-----
Confidence 88886 778999999995 799999999963 3321110 00011 1237789999986 578889999987
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCC
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 331 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~ 331 (447)
++.+.+.....+. +.+.....++..+++. .+.+.+..+.+.++++.+.+.|.+.. .. +...++|+++.
T Consensus 221 -~~i~~~~~~~~~~---~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~---~~--~~~~~~~~~~~- 288 (337)
T PRK03967 221 -EIIDALYRIKPPF---SLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA---YP--SDANFLLLKLD- 288 (337)
T ss_pred -HHHHHHHhhcCCC---CCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc---CC--CCCcEEEEhHH-
Confidence 6777776654332 2233333333334432 12345556667777778888886532 22 23455676542
Q ss_pred CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 332 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 332 ~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
+.+.|.++||.++.. ++ ...+++|+++. + .++.+++.++|.++...
T Consensus 289 -------~~~~l~~~gi~v~~~--~~----~~~~~~Ri~~~---~----~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 289 -------AYDYLLENGIVVRKL--SG----RLEGHIRVTVG---K----REENDEFIKALKEIKEG 334 (337)
T ss_pred -------HHHHHHHCCEEEEeC--CC----CCCCeEEEecC---C----HHHHHHHHHHHHHHHHh
Confidence 567777889999642 11 12458999865 2 77889999999876653
No 228
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=6.7e-19 Score=171.71 Aligned_cols=214 Identities=13% Similarity=0.069 Sum_probs=151.5
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccc
Q 013217 59 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 138 (447)
Q Consensus 59 ~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 138 (447)
.|++..+.+| ++++++-|.+. .+.+.||+.|+.+++.+++++||+|++.+..|++...... ..+...
T Consensus 59 ~~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~----~~l~~~ 125 (395)
T PRK08114 59 RGTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCS----KILSKL 125 (395)
T ss_pred CCChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHH----HHHHhc
Confidence 4778888998 57888888765 2445889999999999999999999998877766532110 011122
Q ss_pred cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhC--CEEEEehhhhccccccc
Q 013217 139 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG--ALLMMDMAHISGLVAAS 214 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g--~~livD~a~~~g~~~~~ 214 (447)
|. ++..++ ..|++++++++++ +||+|++.++.||. ..|+++|+++|+++| +++++|.+++.+..
T Consensus 126 Gi--~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~--- 193 (395)
T PRK08114 126 GV--TTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL--- 193 (395)
T ss_pred Cc--EEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc---
Confidence 33 444432 2478999999987 89999999887776 789999999999985 99999999977754
Q ss_pred cCCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH
Q 013217 215 VVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 290 (447)
Q Consensus 215 ~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~ 290 (447)
..|++ ++|++++|+|||++|+. +|+++.++ ++.+.+..... ..|....+.- .+..++.+.+ +
T Consensus 194 --~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~------~~~~~l~~~~~--~~G~~~~p~~--a~l~~rgl~T--L 259 (395)
T PRK08114 194 --FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA------RCWEQLRENSY--LMGQMVDADT--AYMTSRGLRT--L 259 (395)
T ss_pred --cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH------HHHHHHHHHHH--hccCCCCHHH--HHHHHcCCCc--H
Confidence 23444 69999999999999985 37776665 55554443211 1122111111 1223444433 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHC
Q 013217 291 KVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 291 ~~~~~~~~~~~~~l~~~L~~~ 311 (447)
.-++++..+|+..+++.|++.
T Consensus 260 ~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 260 GVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 667999999999999999984
No 229
>PLN02590 probable tyrosine decarboxylase
Probab=99.84 E-value=2.7e-18 Score=173.10 Aligned_cols=313 Identities=16% Similarity=0.114 Sum_probs=195.3
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCcc----ceeeecCCcHHHHHHHHHHhcC-----------CCCEEEEecCCCCcccC
Q 013217 61 NEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK-----------PHDRIMGLDLPHGGHLS 125 (447)
Q Consensus 61 ~~~~~~le~~~~~~~~~~~g~~~~~~----~~~v~~~sGs~a~~~~~~al~~-----------pgd~Vl~~~~~~~~~~~ 125 (447)
.+...++|+.+.+|+++++|.+...+ ..-+.+++||+||+.++.+... |.-.|.+.+..|.+.
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv-- 242 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSF-- 242 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHH--
Confidence 34567899999999999999986411 1123346677898877665321 111233333333221
Q ss_pred CCcccccccccccccee-EEEecccCC-CCCCCCHHHHHHHhhhh-----CCcEEEEc-CC-CCCCCCChHHHHHHHHHh
Q 013217 126 HGFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAG-AS-AYPRDFDYPRMRQIADAV 196 (447)
Q Consensus 126 ~~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~id~~~l~~~~~~~-----~~klii~~-~~-~~~~~~~~~~i~~ia~~~ 196 (447)
.+.+.+.|.+- .++.+++|. +++.+|+++|++++.+. .|-+|+.+ .+ +.+...|+++|+++|++|
T Consensus 243 ------~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~ 316 (539)
T PLN02590 243 ------RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY 316 (539)
T ss_pred ------HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh
Confidence 23455666531 234444654 35789999999999653 25566665 23 333378999999999999
Q ss_pred CCEEEEehhhhccccccccCC---CCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHH-------hhhc----
Q 013217 197 GALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA-------INNA---- 261 (447)
Q Consensus 197 g~~livD~a~~~g~~~~~~~~---~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~-------i~~~---- 261 (447)
|+|++||+|++........+. ..++.+|.++.++|||+..|.+ |+++++++. .+.+. +...
T Consensus 317 g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~----~l~~a~~~~~~YL~~~~~~~ 392 (539)
T PLN02590 317 GIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRY----SLIDALKTNPEYLEFKVSKK 392 (539)
T ss_pred CCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHH----HHHHHhhcCHHHhCCccccc
Confidence 999999999654433322111 2334689999999999999988 999988741 11111 1100
Q ss_pred ------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCCCCeeEEecCCCCCC
Q 013217 262 ------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGI 334 (447)
Q Consensus 262 ------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~v~~~~~~~ 334 (447)
...+.+.+-. .....++.+++....+++.+++++..+.+++|.+.|++ .+|+++.+.. -.++.+.+.+.+.
T Consensus 393 ~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~-l~iVcFr~~~~~~ 470 (539)
T PLN02590 393 DTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY-FSLVCFRLAPVDG 470 (539)
T ss_pred ccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-eEEEEEEecCCCC
Confidence 0011222222 34566788888888889999999999999999999987 6799887532 2233333333222
Q ss_pred CH-------HHHHHHHhhcCeE-EccCCCCCCCCCCCCCeEEEecCc-cccCCCCHHHHHHHHHHHHHHHHH
Q 013217 335 DG-------ARVEKILDMASIT-LNKNSVPGDKSALVPGGIRIGSPA-MTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 335 ~~-------~~~~~~L~~~gI~-v~~~~~p~~~~~~~~~~iRig~~~-~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
+. .++.+.|.+.|.. ++...+. ....||+++.. .|+ ++|++.+.+.|.+....
T Consensus 471 ~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~------g~~~lR~~i~n~~T~----~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 471 DEDQCNERNRELLAAVNSTGKIFISHTALS------GKFVLRFAVGAPLTE----EKHVTEAWQIIQKHASK 532 (539)
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEeeEEC------CEEEEEEEecCCCCC----HHHHHHHHHHHHHHHHH
Confidence 21 2455555555543 4322111 12379998643 444 99999999999876543
No 230
>PRK07505 hypothetical protein; Provisional
Probab=99.84 E-value=7.7e-18 Score=167.53 Aligned_cols=332 Identities=15% Similarity=0.125 Sum_probs=192.7
Q ss_pred cCeeEecCCCCC----CHHHHHHHhhhhhccCC-CCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc
Q 013217 21 KSLELIASENFT----SRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~n~~----~~~v~~a~~~~~~~~~~-~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG 95 (447)
..|++.. .+++ .|.|.+++...+.. |. .++.+.+.....+... ..+++++++++. + .+..+||
T Consensus 47 ~~ld~~s-~~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~~~~~~~~~~----~l~~~la~~~~~--~----~~~~~sG 114 (402)
T PRK07505 47 TFVNFVS-CSYLGLDTHPAIIEGAVDALKR-TGSLHLSSSRTRVRSQILK----DLEEALSELFGA--S----VLTFTSC 114 (402)
T ss_pred eEEEeec-CCccCCCCCHHHHHHHHHHHHH-hCCCCCCccchhhhhHHHH----HHHHHHHHHhCC--C----EEEECCh
Confidence 3466654 4454 79999999888753 32 1111121111222223 344688899987 2 2334799
Q ss_pred HHHHHHHHHHhc----CCCC-EEEEec-CCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhC
Q 013217 96 SPANFEVYTAIL----KPHD-RIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR 169 (447)
Q Consensus 96 s~a~~~~~~al~----~pgd-~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~ 169 (447)
+.|+..++..+. .+|+ .|++.+ ..|++... + ......+. .++.++. .|++++++++++ +
T Consensus 115 ~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~--~----~~~~~~~~--~v~~~~~------~d~~~l~~~~~~-~ 179 (402)
T PRK07505 115 SAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNI--L----KGICADET--EVETIDH------NDLDALEDICKT-N 179 (402)
T ss_pred HHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHh--h----hhhhhcCC--eEEEeCC------CCHHHHHHHHhc-C
Confidence 989887775432 2233 244444 33443210 0 01111121 3334332 489999998876 6
Q ss_pred CcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccc-cccc-C---CCC--CCcccEEEeCCCcccCCCCCc
Q 013217 170 PKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLV-AASV-V---ADP--FKYCDVVTTTTHKSLRGPRGG 240 (447)
Q Consensus 170 ~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~-~~~~-~---~~~--~~~~Di~~~s~~K~l~Gp~gG 240 (447)
+++++++.+++|+ ..++++|.++|+++|+++|+|++|+.+.. ..+. . ... .+...+++.|++|.++++ ||
T Consensus 180 ~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg 258 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GG 258 (402)
T ss_pred CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-Ce
Confidence 7888777666664 78899999999999999999999864322 1111 0 011 122357788999998654 78
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCC
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 319 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 319 (447)
++++.++ ++.+.+.....+.+ .++++...+++...+++....+.+.+..+++.++.+.+.+.+... ..+
T Consensus 259 ~~~~~~~-----~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g 328 (402)
T PRK07505 259 VIMLGDA-----EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSG 328 (402)
T ss_pred EEEeCCH-----HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCC
Confidence 8775442 66666665444433 345555666666666665444445555555555554443332211 111
Q ss_pred CCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 320 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
....+.++.+.. .....++.+.|.++||.+.....|.. +.....||++++..++ ++|++++++.|++++..
T Consensus 329 ~~~~i~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~~t----~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 329 SFLPIRLIYIGD-EDTAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRASHT----NDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCCEEEEEeCC-HHHHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCccCC----HHHHHHHHHHHHHHHHh
Confidence 112222222221 11346788888899999975432221 1123589999988777 99999999999988764
No 231
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.84 E-value=3.3e-19 Score=182.76 Aligned_cols=299 Identities=17% Similarity=0.132 Sum_probs=198.8
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.+++.++++||++...+ .++|| .+|.++++++++|||+||+....|-+.+ |+ .+.++|.....+.-.
T Consensus 178 eAq~~AA~~fgAd~tyF-----lvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hg------aLiLsGa~PVYl~P~ 245 (720)
T PRK13578 178 DAQKHAAKVFNADKTYF-----VLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HG------ALIQAGATPVYLETA 245 (720)
T ss_pred HHHHHHHHHhCCCceEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH------HHHHcCCeEEEeecc
Confidence 56789999999998643 26776 8999999999999999999876665543 11 134556532222211
Q ss_pred cCCC--CCCCCHHH-----HHHHhhhh--------C-CcEEEEcCCCCCC-CCChHHHHHH-HHHhCCEEEEehhhhccc
Q 013217 149 LDES--TGLVDYDM-----LEKTAILF--------R-PKLIIAGASAYPR-DFDYPRMRQI-ADAVGALLMMDMAHISGL 210 (447)
Q Consensus 149 ~~~~--~~~id~~~-----l~~~~~~~--------~-~klii~~~~~~~~-~~~~~~i~~i-a~~~g~~livD~a~~~g~ 210 (447)
.++- -+.|+++. |++++.++ + .++++++.|+|-+ +.|++.|.++ |+.++ ++++|+||++.+
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 2211 12456544 88888764 2 3788888888877 7899999998 78888 999999998766
Q ss_pred ccccc----CCCCCC-ccc----EEEeCCCcccCCCCC-ceEEeecCCcc---hhhHHHHhhhccCCCCCCCCcHHHHHH
Q 013217 211 VAASV----VADPFK-YCD----VVTTTTHKSLRGPRG-GMIFFKKDPVL---GVELESAINNAVFPGLQGGPHNHTIGG 277 (447)
Q Consensus 211 ~~~~~----~~~~~~-~~D----i~~~s~~K~l~Gp~g-G~i~~~~~~~~---~~~~~~~i~~~~~~~~~g~p~~~~~aa 277 (447)
.+.+. .++.+. ++| +++-|+||+|++... ++|.++++... .+--.++++.+..-..+++|++..+|+
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmAS 404 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAA 404 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHH
Confidence 54432 112222 688 999999999998766 88888663100 000024566554444567899999999
Q ss_pred HHHHHHHhcChhHHHHHHHHHHHHHHHHHHH-HH-CCcEeeeC---------------------------CC--------
Q 013217 278 LAVCLKHAQSPEFKVYQNKVVSNCRALASRL-VE-LGYKLVSG---------------------------GS-------- 320 (447)
Q Consensus 278 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L-~~-~g~~~~~~---------------------------~~-------- 320 (447)
+.+|.+++.....++.+++..+.+..+++.| +. .+++++.+ +.
T Consensus 405 LDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~ 484 (720)
T PRK13578 405 LDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGY 484 (720)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccccc
Confidence 9998887765445777888889999999988 33 46665521 00
Q ss_pred -------CCeeEEecCCCCCCC------------HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCH
Q 013217 321 -------DNHLVLVDLRPMGID------------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 381 (447)
Q Consensus 321 -------~~~~~~v~~~~~~~~------------~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~ 381 (447)
|.--+++.. .|++ +..+.+.|+++||.+.... ...+=+ +.+.|.++
T Consensus 485 ~~~~~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~t~ 549 (720)
T PRK13578 485 AEDQYFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSILF----LLTPAEDM 549 (720)
T ss_pred cccccccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCH
Confidence 111112222 2333 7889999988899986531 112322 23345558
Q ss_pred HHHHHHHHHHHHHHH
Q 013217 382 KEFVAIADFIHEGVE 396 (447)
Q Consensus 382 ~di~~l~~~i~~~l~ 396 (447)
++++++.++|.+.-+
T Consensus 550 ~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 550 AKLQQLVAMLARFEK 564 (720)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998887643
No 232
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.84 E-value=1.6e-18 Score=167.77 Aligned_cols=301 Identities=19% Similarity=0.211 Sum_probs=186.8
Q ss_pred hcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HH
Q 013217 20 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 98 (447)
Q Consensus 20 ~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a 98 (447)
++.+.|..++|..++.+.+.....+ . .||. .. ...++ +++++++|.+++ +|..++|+ ++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~-~----~y~~------~~-~~~lr----~~la~~~~~~~~----~i~~t~G~~~~ 76 (330)
T TIGR01140 17 EDWLDFSTGINPLGPPVPPIPASAW-A----RYPD------PE-YDELR----AAAAAYYGLPAA----SVLPVNGAQEA 76 (330)
T ss_pred hheeEccccCCCCCCChhhcchHHH-h----hCCC------cc-HHHHH----HHHHHHhCCChh----hEEECCCHHHH
Confidence 3557888888876644444322221 1 2222 11 13444 678888998765 44458888 56
Q ss_pred HHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 99 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 99 ~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
+.++ ..++.+| +|++.+|.|.++.. .+...| ++++.++ |++++++.++ ++++|+++.+
T Consensus 77 i~~~-~~~l~~g-~vl~~~p~y~~~~~--------~~~~~g--~~~~~~~--------d~~~l~~~~~--~~~~v~i~~p 134 (330)
T TIGR01140 77 IYLL-PRLLAPG-RVLVLAPTYSEYAR--------AWRAAG--HEVVELP--------DLDRLPAALE--ELDVLVLCNP 134 (330)
T ss_pred HHHH-HHHhCCC-eEEEeCCCcHHHHH--------HHHHcC--CEEEEeC--------CHHHHHhhcc--cCCEEEEeCC
Confidence 6654 4446788 68888887766532 222334 3555532 8899998883 6788888877
Q ss_pred CCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccc-cCCC-CCCcccEEEeCCCcccC--CCCCceEEeecCCc
Q 013217 179 AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS-VVAD-PFKYCDVVTTTTHKSLR--GPRGGMIFFKKDPV 249 (447)
Q Consensus 179 ~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~-~~~~-~~~~~Di~~~s~~K~l~--Gp~gG~i~~~~~~~ 249 (447)
+||+ ..+ +++|.++|+++|+++++|+++. ++.... .... .....++++.|++|+++ |.|.|++++++
T Consensus 135 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--- 210 (330)
T TIGR01140 135 NNPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--- 210 (330)
T ss_pred CCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH---
Confidence 8776 666 5677788899999999999974 333221 1000 00124689999999974 55669999987
Q ss_pred chhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHHCC-cEeeeCCCCCeeEEe
Q 013217 250 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLV 327 (447)
Q Consensus 250 ~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~v 327 (447)
++.+.+....... +.+....+++...+ ...++ +...+++.++.+.+.+.|++.+ +++.. ....+.|+
T Consensus 211 ---~~~~~l~~~~~~~---~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~f~~~ 279 (330)
T TIGR01140 211 ---ALLARLREALGPW---TVNGPARAAGRAAL---ADTAWQAATRARLAAERARLAALLARLGGLEVVG--GTALFLLV 279 (330)
T ss_pred ---HHHHHHHhcCCCC---CchHHHHHHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHHhCCCceECC--CCCeEEEE
Confidence 6777776643221 22333333322233 33344 5667888888999999998876 55433 23566788
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
++. +..++.+.|.++||.+..+..++ ...+++||+++.. . .++ +++..++
T Consensus 280 ~~~----~~~~l~~~l~~~gi~v~pg~~f~---~~~~~~iRi~~~~--~----~~~-~~~~~~l 329 (330)
T TIGR01140 280 RTP----DAAALHEALARRGILIRDFDNFP---GLDPRYLRFALPT--D----EEN-DRLEEAL 329 (330)
T ss_pred EcC----CHHHHHHHHHHCCEEEEECCCCC---CCCCCEEEEEecC--H----HHH-HHHHHhh
Confidence 764 35678888888999996543221 1224589998642 1 233 6666554
No 233
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.84 E-value=5.6e-19 Score=173.35 Aligned_cols=212 Identities=22% Similarity=0.243 Sum_probs=147.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| +.++++.|.+. .+...+|++|+.+++.++++|||+|++.++.|++.+.... .+.+
T Consensus 49 ~~p~~~~le----~~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~-------~~~~ 112 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLN-------ALAK 112 (382)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH-------HHHh
Confidence 455567777 57888888542 2334566699999999999999999999998876542110 0111
Q ss_pred c-eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccC
Q 013217 140 I-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 216 (447)
Q Consensus 140 ~-~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~ 216 (447)
. .+++... + ..|++++++++++ +||+|+++.++||+ ..|+++|.++|+++|+++++|+++..+...
T Consensus 113 ~~~~~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---- 181 (382)
T TIGR02080 113 KGCFRVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ---- 181 (382)
T ss_pred hcCeEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 1 1233221 2 2489999999987 89999999888886 789999999999999999999998665432
Q ss_pred CCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCC-CCCCCCcHHHHHHHHHHHHHhcChhHH
Q 013217 217 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFK 291 (447)
Q Consensus 217 ~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~-~~~g~p~~~~~aal~~al~~~~~~~~~ 291 (447)
.|+. ++|++++|++|++.|+. +|+++++++ ++.+++...... +...+| . -+ +.+++.+. .+.
T Consensus 182 -~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-----~~~~~l~~~~~~~g~~~sp--~-~a--~l~lr~l~--tl~ 248 (382)
T TIGR02080 182 -NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-----QVAEELAWWANNLGVTGGA--F-DS--YLTLRGLR--TLV 248 (382)
T ss_pred -CchhhCCCEEEeecceeccCCCCceeEEEEeCCH-----HHHHHHHHHHHccCCCCCH--H-HH--HHHHcccc--hHH
Confidence 2333 58999999999998764 588877664 666666543221 222222 1 12 22344443 356
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q 013217 292 VYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 292 ~~~~~~~~~~~~l~~~L~~~ 311 (447)
.+++++.+|+..+++.|++.
T Consensus 249 ~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 249 ARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 67889999999999999873
No 234
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=6.1e-19 Score=172.72 Aligned_cols=224 Identities=18% Similarity=0.175 Sum_probs=152.4
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
||...|| +++....+| +.+++++|.+.. +.++||++|+.+++ ++++|||+|++.++.|++.+...
T Consensus 43 ~~~y~r~--~~pt~~~le----~~la~l~g~~~~-----~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~--- 107 (366)
T PRK08247 43 GFDYSRT--GNPTRGVLE----QAIADLEGGDQG-----FACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF--- 107 (366)
T ss_pred CccccCC--CCchHHHHH----HHHHHHhCCCcE-----EEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH---
Confidence 3444443 456677887 579999999762 44588888888664 68899999999999887643211
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
...+...|. +++.++. .|++++++++++ +|++|+++.|+||. ..|+++|.++|+++|+++++|+++..
T Consensus 108 -~~~~~~~G~--~v~~vd~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~ 177 (366)
T PRK08247 108 -EEHWKKWNV--RFVYVNT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYT 177 (366)
T ss_pred -HHHhhccCc--eEEEECC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 011122343 4444322 489999999987 89999998888886 56899999999999999999999754
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCC---CCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp---~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
+.. ..|+. ++|++++|++|+++|+ ++|+++.+++ ++.+++........ ...+... + +.+++.
T Consensus 178 ~~~-----~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-----~l~~~~~~~~~~~g-~~~s~~~-a--~l~~~~ 243 (366)
T PRK08247 178 PVL-----QRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-----ELCERLAYYQNAAG-AVLSPFD-S--WLLIRG 243 (366)
T ss_pred ccc-----cCchhcCCcEEEeecceeccCCCceeeeEEecChH-----HHHHHHHHHHHhcC-CCCChHH-H--HHHHhc
Confidence 432 22333 5899999999999876 5688888743 56665543221111 1112211 1 122332
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHH-CCcEe
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVE-LGYKL 315 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~ 315 (447)
+. .+..++++..+|++.+.+.|++ +++..
T Consensus 244 l~--tl~~r~~~~~~~a~~l~~~L~~~p~v~~ 273 (366)
T PRK08247 244 MK--TLALRMRQHEENAKAIAAFLNEQPGVTD 273 (366)
T ss_pred cC--cHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence 22 3556778889999999999998 46654
No 235
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=7.3e-19 Score=173.36 Aligned_cols=213 Identities=20% Similarity=0.208 Sum_probs=149.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| +++++++|.+. .+.++||++|+..++.++++|||+|++..+.|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~----~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT----EFLPRMG 128 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH----HHHhhCC
Confidence 456667777 58899999865 3556999999999999999999999999998876432110 0112233
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
+++..++ ..|++++++++++ +|++|+++.++||+ ..|+++|.++|+++|+++++|++++.+...
T Consensus 129 --i~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 194 (398)
T PRK08249 129 --VDVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQ----- 194 (398)
T ss_pred --eEEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccC-----
Confidence 3443322 2689999999987 89999998788875 789999999999999999999998654321
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|++|+++|+. ||+++.++ ++.+++...... .|.......+.+ +++.+. .+..+
T Consensus 195 ~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~------~l~~~l~~~~~~--~g~~~s~~~a~l--~l~~l~--tL~~R 262 (398)
T PRK08249 195 NPLALGADLVIHSATKFLSGHADALGGVVCGSK------ELMEQVYHYREI--NGATMDPMSAYL--ILRGMK--TLKLR 262 (398)
T ss_pred CchhhCCCEEeccCceecCCCCCceEEEEECCH------HHHHHHHHHHHh--cCCCCCHHHHHH--HHhCcc--hHHHH
Confidence 2332 68999999999998754 47777665 666666543221 122222222222 333332 35677
Q ss_pred HHHHHHHHHHHHHHHHHC
Q 013217 294 QNKVVSNCRALASRLVEL 311 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~~ 311 (447)
+++..+|++.+.+.|++.
T Consensus 263 ~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 263 VRQQQESAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 899999999999999873
No 236
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.5e-18 Score=154.75 Aligned_cols=324 Identities=19% Similarity=0.210 Sum_probs=209.6
Q ss_pred CeeEecCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHH
Q 013217 22 SLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 99 (447)
Q Consensus 22 ~i~l~~~~n~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~ 99 (447)
...| -|.+.+ +.+.+++|.. ...|...|+..+....+| ++.++++|-+.. ..++|||.+|
T Consensus 23 ~vDL-RSDTvT~PTdeMr~am~e--------A~vgDdVyGeD~tt~rLE----~~vA~l~GKEAg-----LFv~SGTmgN 84 (384)
T KOG1368|consen 23 SVDL-RSDTVTVPTDEMRRAMAE--------ASVGDDVYGEDPTTNRLE----QRVAELFGKEAG-----LFVPSGTMGN 84 (384)
T ss_pred cccc-ccccccCChHHHHHHHhh--------cccCcccccCCccHHHHH----HHHHHHhCccce-----eeeccccccc
Confidence 3444 355543 3456666653 234445677777788888 588999998864 3349999999
Q ss_pred HHHHHHhc-CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhC-------Cc
Q 013217 100 FEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-------PK 171 (447)
Q Consensus 100 ~~~~~al~-~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~-------~k 171 (447)
..+++.-+ +||.+|++-+..|--.+..+ ....+.|. .+.++.. ++++.+|++++++++...+ |+
T Consensus 85 llaIm~Hc~~rg~eii~gd~~HI~~~E~g-----g~s~l~gv--~~~tv~~-e~dgtm~ledIe~~ir~~~GD~H~p~T~ 156 (384)
T KOG1368|consen 85 LLAIMVHCHQRGSEIIVGDRAHIHRYEQG-----GISQLAGV--HVRTVKN-ENDGTMDLEDIEAAIRVPKGDCHMPPTK 156 (384)
T ss_pred HHHHHHHhcCCCceEEeccchheeehhcc-----Chhhhccc--eeEeeee-CCCCeeeHHHHHHhhcCCCCCccCCCce
Confidence 88887764 69999998776542221111 01123343 3444333 3578999999999997432 68
Q ss_pred EEEEcCC-CC-CC-CCCh---HHHHHHHHHhCCEEEEehhhhccc-cccccCCCC-CCcccEEEeCCCcccCCCCCceEE
Q 013217 172 LIIAGAS-AY-PR-DFDY---PRMRQIADAVGALLMMDMAHISGL-VAASVVADP-FKYCDVVTTTTHKSLRGPRGGMIF 243 (447)
Q Consensus 172 lii~~~~-~~-~~-~~~~---~~i~~ia~~~g~~livD~a~~~g~-~~~~~~~~~-~~~~Di~~~s~~K~l~Gp~gG~i~ 243 (447)
+|++..+ +| ++ ..|+ +++.++|+++|+.+++|+|..... ++.++.-.. ...+|.+.-.++|.|++|-|++|+
T Consensus 157 LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViV 236 (384)
T KOG1368|consen 157 LICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIV 236 (384)
T ss_pred EEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEE
Confidence 9988743 43 33 6666 477788999999999999864322 122211000 014788999999999999999999
Q ss_pred eecCCcchhhHHHHhhhccCCCCCCCCcHH-HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC-cEeeeCCCC
Q 013217 244 FKKDPVLGVELESAINNAVFPGLQGGPHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSD 321 (447)
Q Consensus 244 ~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~-~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 321 (447)
+++ +++++........ .|+.... .+|+. |+- ...+.+. ..++-.+.++.|++.+...+ +++-.+..+
T Consensus 237 G~k------~FI~kA~~~RKal-GGGmRQsGvLaaa--aLv-al~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~e 305 (384)
T KOG1368|consen 237 GSK------DFIDKARHFRKAL-GGGMRQSGVLAAA--ALV-ALDENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVE 305 (384)
T ss_pred ccH------HHHHHHHHHHHHh-cCchhHHHHHHHH--HHH-HhhcchH-HHHHHHHHHHHHHHHhccccceeeecchhh
Confidence 998 6766543221111 1222222 22222 221 2223344 45667788899999998865 776655455
Q ss_pred CeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+.++.+.+...+++.+++.+.++++||.+ ++++ ..++|+.++.--+ .++++.+...+.+.+
T Consensus 306 tNiv~~~l~q~~~~~~~l~~~~~k~gi~l----m~~~-----s~r~Rivlh~Qvt----~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 306 TNIVNMVLCQARLTAEELCKFLEKNGILL----MGGA-----SRRIRIVLHHQVT----DEDVEYVKSVLSKKF 366 (384)
T ss_pred cceeeeecccccCCHHHHHHHHHHCCeEE----eecc-----ccceEEEEEEecC----HHHHHHHHHHHHHHH
Confidence 66666656556789999999999999998 3332 3479998876555 899999988885433
No 237
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.83 E-value=5.6e-19 Score=180.92 Aligned_cols=292 Identities=15% Similarity=0.118 Sum_probs=201.2
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.+++.++++||++...+ +++|| .+|.++++++++|||+||+....|-+.+. .+.++|. +++.+.
T Consensus 199 eAe~~AA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h--------aLilsga--~PVYl~ 263 (714)
T PRK15400 199 EAEEYIARVFNADRSYM-----VTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH--------LMMMSDV--TPIYFR 263 (714)
T ss_pred HHHHHHHHHhCCCcEEE-----EeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCC--eEEEec
Confidence 56788999999998633 26776 89999999999999999998776655431 3445665 333322
Q ss_pred cC-CCC---CCCC-----HHHHHHHhhhh----CCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccc
Q 013217 149 LD-EST---GLVD-----YDMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAAS 214 (447)
Q Consensus 149 ~~-~~~---~~id-----~~~l~~~~~~~----~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~ 214 (447)
.. +.. +.++ .+.+++.+.++ +|+.++++.|+|-+ +.|++.|.++|+.++ +++|+||++.+.+.+
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 11 111 2345 89999998763 23367777778776 889999999999887 789999987654444
Q ss_pred cCC--CCCC-cc---c--EEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHh
Q 013217 215 VVA--DPFK-YC---D--VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 285 (447)
Q Consensus 215 ~~~--~~~~-~~---D--i~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~ 285 (447)
..+ +++. ++ | +++-|+||+|+|... ++|.++.. --.++++.+.....+++|++..+|++.+|.+++
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-----vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m 416 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-----VNEETFNEAYMMHTTTSPHYGIVASTETAAAMM 416 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-----CCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 332 3332 45 5 999999999999766 78777552 112455555444456789999999999999888
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHH-CC------cEeeeCC----------------------------CCCeeEEecCC
Q 013217 286 QSPEFKVYQNKVVSNCRALASRLVE-LG------YKLVSGG----------------------------SDNHLVLVDLR 330 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~l~~~L~~-~g------~~~~~~~----------------------------~~~~~~~v~~~ 330 (447)
.....++.+++..+.+..+++.|.+ .+ |.++.+. -|.--+++..+
T Consensus 417 ~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tp 496 (714)
T PRK15400 417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP 496 (714)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeC
Confidence 7544577888899999999999877 34 4444210 01111233332
Q ss_pred C---------CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 331 P---------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 331 ~---------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
. .|+++..+.++|+++||.+.... ...+=+ +.+.|.++++++++.++|.+.-+
T Consensus 497 gi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---------~~~iLf----l~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 497 GMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLF----LFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred CCCCCccccccCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence 2 46778899999999999997531 123333 23345559999999998877533
No 238
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.83 E-value=1.7e-18 Score=152.32 Aligned_cols=324 Identities=17% Similarity=0.202 Sum_probs=208.0
Q ss_pred cCeeEecCC--CCCCHHHHHHHhhhhhccCCCCCCCCcccC-c------hhHHHHHHHHHHHHHHHHcCCCCCccceeee
Q 013217 21 KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-G------NEYIDELETLCQKRALAAFNLDENKWGVNVQ 91 (447)
Q Consensus 21 ~~i~l~~~~--n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~-g------~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~ 91 (447)
..||+.|-. ..++++.++|+.. |.+||.-..|-. | .+-+..+- +.+++++|++. +.
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~R 80 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------VR 80 (382)
T ss_pred CccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------ee
Confidence 456665443 4679999999864 456665544331 1 11122221 35889999984 45
Q ss_pred cCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccC-CCCCCCCHHHHHHHhhh--
Q 013217 92 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAIL-- 167 (447)
Q Consensus 92 ~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~id~~~l~~~~~~-- 167 (447)
+|.|+ ++-++++.++.++||.|++....|-.. |. .....|. ++..++.. -..+.++++...+.+++
T Consensus 81 ~t~GARe~KfavMhal~~~gd~vV~D~~aHYtt----yv----AAEragl--~v~eVp~tg~Pey~i~~e~y~~viee~~ 150 (382)
T COG1103 81 VTAGAREAKFAVMHALCKEGDWVVVDSLAHYTT----YV----AAERAGL--NVAEVPNTGYPEYKITPEGYAEVIEEVK 150 (382)
T ss_pred ecccchhhHHHHHHHhccCCCEEEEcCcchHHH----HH----HHHhcCC--eEEecCCCCCCceEecHHHHHHHHHHHH
Confidence 69998 999999999999999999988765332 11 2234454 33333321 12457888877766643
Q ss_pred ----hCCcEEEEcC--CCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCC-CCCc
Q 013217 168 ----FRPKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG-PRGG 240 (447)
Q Consensus 168 ----~~~klii~~~--~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~G-p~gG 240 (447)
..|.+.+++. .+|+...|.+.++++|+++|++++...|+..|-++...... ++||+++|+||++++ .+.|
T Consensus 151 ~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~---g~DFiVgSGHKsmAAs~PiG 227 (382)
T COG1103 151 DEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEI---GADFIVGSGHKSMAASAPIG 227 (382)
T ss_pred hccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccccccc---CCCEEEecCccchhccCCee
Confidence 1366777763 45666889999999999999999999999888775543332 599999999999853 3458
Q ss_pred eEEeecCCcchhhHHHHhhhcc---CC-------C--CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHH
Q 013217 241 MIFFKKDPVLGVELESAINNAV---FP-------G--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 308 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~---~~-------~--~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 308 (447)
++..+. ++.+.+-+.. ++ | ..|.|.+..||++-...+. -.+++.-.++++++.+.|
T Consensus 228 vl~~~e------E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eR------VkrWdeEv~kaR~fv~el 295 (382)
T COG1103 228 VLAMSE------EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVER------VKRWDEEVEKARWFVAEL 295 (382)
T ss_pred EEeehh------HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 888887 6766553321 21 1 1344544444443322211 234566678899999999
Q ss_pred HHCC-cEeeeCCCCCeeEEecCCCCCC---------CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCC
Q 013217 309 VELG-YKLVSGGSDNHLVLVDLRPMGI---------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 378 (447)
Q Consensus 309 ~~~g-~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g 378 (447)
++.| +..++..+.+|-+ +.+..+.. .+..+.+-|.++||.-- .||. +..+.+|+ .|
T Consensus 296 Ekigg~~qlG~rPk~HdL-m~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI---~~G~-----Tk~~K~sv-----yG 361 (382)
T COG1103 296 EKIGGVKQLGERPKNHDL-MKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI---QPGQ-----TKYFKLSV-----YG 361 (382)
T ss_pred HHhhhHHHhCCCCcccce-eeecCchHHHHHHhCcCCceeeHHHHHhcCcccc---ccCc-----eeEEEEEe-----ec
Confidence 9965 7766644445533 22222111 23346677888887531 1221 33566654 67
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 013217 379 FSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 379 ~~~~di~~l~~~i~~~l~~~ 398 (447)
++.|++++++++++++++.+
T Consensus 362 l~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 362 LSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 88999999999999988753
No 239
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.83 E-value=2e-18 Score=167.37 Aligned_cols=297 Identities=13% Similarity=0.129 Sum_probs=195.3
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc-CCCCEEEEecCCCCcccCCCcccccccccc
Q 013217 59 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 137 (447)
Q Consensus 59 ~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~-~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 137 (447)
.+.++.+.+. .+.+.++++|+.+.+.. +.+...|||.++.+++.+++ ++||+|++.. .++..+.. ..++.
T Consensus 33 Rs~~F~~i~~-e~~~~L~~l~~~~~~~~-v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-----~FG~r~~~--eia~~ 103 (374)
T TIGR01365 33 RSKLGKEKLA-EAIKKTREMLGVPADYL-IGIVPASDTGAVEMALWSMLGCRGVDVLAWE-----SFGKGWVT--DVTKQ 103 (374)
T ss_pred CCHHHHHHHH-HHHHHHHHHhCCCCCcE-EEEECCchHHHHHHHHHHcCCCCCCeEEEEC-----HHHHHHHH--HHHHh
Confidence 3445555444 66789999999854332 45667899999999999998 5899999753 22222210 12233
Q ss_pred ccce-eEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC--CCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccc
Q 013217 138 TSIY-FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS 214 (447)
Q Consensus 138 ~g~~-~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~--~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~ 214 (447)
.|.. +..+. .+ .+..+|+++++. +.. |++++ ++++...|++++...+ +++++++|++.+.|..+.
T Consensus 104 ~g~~~v~~l~--~~-~g~~~~~~~ve~-----~~~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l- 171 (374)
T TIGR01365 104 LKLPDVRVLE--AE-YGKLPDLKKVDF-----KND-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDL- 171 (374)
T ss_pred cCCCCcEEEc--CC-CCCCCCHHHcCC-----CCC-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCC-
Confidence 4442 33333 32 456789999872 222 44443 3333367887655322 489999999877775533
Q ss_pred cCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhc----------------------cCCCCCCCCc
Q 013217 215 VVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA----------------------VFPGLQGGPH 271 (447)
Q Consensus 215 ~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~----------------------~~~~~~g~p~ 271 (447)
.++.+|++++|.+|+|.+|.| |+++++++ ..++.... ....+..||+
T Consensus 172 ----~~d~iDv~~tgsQK~L~~ppGls~v~vs~~------Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~ 241 (374)
T TIGR01365 172 ----DYHKLDVVTFSWQKVLGGEGAHGMLILSPR------AVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPS 241 (374)
T ss_pred ----ChhHCcEEEEechhccCCCCceEEEEECHH------HHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChH
Confidence 233589999999999999999 89999884 33322210 0012334666
Q ss_pred HHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHCC-cEeeeC--CCCCeeE-EecCCCCCC-----C-----H
Q 013217 272 NHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVSG--GSDNHLV-LVDLRPMGI-----D-----G 336 (447)
Q Consensus 272 ~~~~aal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~~~-~v~~~~~~~-----~-----~ 336 (447)
.+.+.++..+++.+.++ |++.+.+++.++++.+++.+++.| +.++.. ...++.+ .+.+...++ + .
T Consensus 242 v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~ 321 (374)
T TIGR01365 242 MLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFA 321 (374)
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHH
Confidence 66676777777776664 799999999999999999999998 666652 1123322 334433333 2 5
Q ss_pred HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 337 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 337 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
.++.+.|.++||.+..+. ....+..+|||+....+ .+|++.+.++|+=+.
T Consensus 322 ~~~~~~l~~~gi~i~~G~-----~~~~~~~fRIg~~G~i~----~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 322 KELISTLEKEGVAYDIGS-----YRDAPSGLRIWCGATVE----KSDLECLCPWLDWAF 371 (374)
T ss_pred HHHHHHHHHCCEEEeccc-----cccCCCceEEecCCcCC----HHHHHHHHHHHHHHH
Confidence 789999999999885431 11234689999887666 999999999987554
No 240
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.83 E-value=5.4e-18 Score=153.19 Aligned_cols=329 Identities=17% Similarity=0.172 Sum_probs=220.6
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHH-HHHHHHh--c
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN-FEVYTAI--L 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~-~~~~~al--~ 107 (447)
..|+.+.....+.....|.++-..+...+...+.+.=+ ..-.+++.+.|+.+.|.+ ++.+++.| +.++.+. .
T Consensus 42 a~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~-~lgdklApLiGA~~~Evv----v~dtts~nl~k~L~aalr~ 116 (407)
T COG3844 42 ARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPE-RLGDKLAPLIGARAGEVV----VTDTTSINLFKVLAAALRP 116 (407)
T ss_pred cCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchh-HHHHHhhhhhcCCCCceE----EeCCcchHHHHHHHHHhcc
Confidence 34667777777777777766555544333344444333 445789999999987642 25555554 3344444 4
Q ss_pred CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCC
Q 013217 108 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD 185 (447)
Q Consensus 108 ~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~ 185 (447)
.+|++|+++.-. .+-..++.....+.+.+.. +++ .+.++++++++++++ ++.+|++++.+|-+ ..|
T Consensus 117 ~~~r~vIv~E~~---~fpTdly~a~g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y~TGql~d 184 (407)
T COG3844 117 QEGRRVIVSEGD---NFPTDLYIAEGLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLLSHVNYKTGQLLD 184 (407)
T ss_pred CCCceEEeecCC---CCCcchhhhcchhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEeccccccccceee
Confidence 568999987632 2212222222233333322 112 256788899999987 88889898777654 789
Q ss_pred hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCC-CCC-ceEEeecCCc--------ch----
Q 013217 186 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG-PRG-GMIFFKKDPV--------LG---- 251 (447)
Q Consensus 186 ~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~G-p~g-G~i~~~~~~~--------~~---- 251 (447)
+.+|.+++|++|++++-|-+|++|.++.+++.. ++|+.+.++||.|+| |.+ +++++.+... .|
T Consensus 185 m~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha 261 (407)
T COG3844 185 MRAITALAHQHGALVGWDLAHSAGAVPVDLHAA---GADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHA 261 (407)
T ss_pred HHHHHHHHHhcCceEEeehhcccCCcceeeccc---CCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCC
Confidence 999999999999999999999999988777665 499999999999965 554 8888877421 00
Q ss_pred --hhHHHHhhhc--cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CCcEeeeCCC---
Q 013217 252 --VELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGS--- 320 (447)
Q Consensus 252 --~~~~~~i~~~--~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~--- 320 (447)
..+.+..... .....+|++.+..++++..+|+.....+..+.+++-...++++.+-++. .++++.++-.
T Consensus 262 ~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~ 341 (407)
T COG3844 262 RPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEE 341 (407)
T ss_pred CcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhh
Confidence 0011000000 0011268888888999998998877667777788888888888876655 3677776421
Q ss_pred -CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecC-ccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 321 -DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP-AMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 321 -~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~-~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+|. ++... .+.++.+.|.++||..... .++.+|+++. .|++ -+|+=..++.|.+++..
T Consensus 342 rGsqv---S~~hp--~~~~V~qaLi~rGVigD~R---------~P~vlRfgftPlY~~----~~DVw~AV~~L~evL~t 402 (407)
T COG3844 342 RGSQV---SLYHP--HGYQVMQALIDRGVIGDFR---------EPDVLRFGFTPLYVS----FVDVWDAVDALEEVLDT 402 (407)
T ss_pred cccee---eEecC--cHHHHHHHHHHcCcccccc---------CCCeeeecCccceec----hhHHHHHHHHHHHHHHh
Confidence 2342 22222 5789999999999987542 2568999965 4565 78988888888888874
No 241
>PLN02509 cystathionine beta-lyase
Probab=99.83 E-value=1.1e-18 Score=173.70 Aligned_cols=215 Identities=21% Similarity=0.217 Sum_probs=145.9
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
|++..+.+| +++++++|.+. .+.++||+.|+.+ +..+++|||+|++.++.|+++..... ..+...|
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~-il~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G 196 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSG 196 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHH-HHHHhCCCCEEEEcCCchhhHHHHHH----HHHHHCC
Confidence 566677777 57888888764 2445888877654 44679999999999988876531100 0112234
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++ ..|++++++++.+ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|+.+...
T Consensus 197 ~--~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~----- 262 (464)
T PLN02509 197 V--VVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS----- 262 (464)
T ss_pred e--EEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-----
Confidence 3 444432 2478999999977 89999999887775 779999999999999999999998776542
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|++|+++|+. ||+++++++ .+.+++....... .+...... + +..++.+. .+..+
T Consensus 263 ~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~-----~l~~~~~~~~~~~-g~~l~p~~-A--~l~lr~L~--tL~~R 331 (464)
T PLN02509 263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYFLQNSE-GSGLAPFD-C--WLCLRGIK--TMALR 331 (464)
T ss_pred ChhhcCCcEEEecCcccccCCCccceeEEEeccH-----HHHHHHHHHHHhc-CCCcCHHH-H--HHHHhhhh--hHHHH
Confidence 2333 68999999999998865 588887764 4444433211111 11122222 1 22333332 35678
Q ss_pred HHHHHHHHHHHHHHHHH-CCc
Q 013217 294 QNKVVSNCRALASRLVE-LGY 313 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~-~g~ 313 (447)
+++..+++..+++.|++ +.+
T Consensus 332 ~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 332 IEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999987 344
No 242
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.82 E-value=1.1e-17 Score=166.63 Aligned_cols=317 Identities=13% Similarity=0.068 Sum_probs=193.3
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC----
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 108 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~---- 108 (447)
.|.+.+++.+.+.+ +..+.+. . ..+...++| ++++++++.+. .+.++||++|+..++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~~~---~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTSRA---F-RNDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-ccccccc---c-CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 78999998887754 2222211 1 123334454 57788888653 34469999999999887742
Q ss_pred -----CC-CEEEEecCCCCcccCCCccccccccc---cccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 013217 109 -----PH-DRIMGLDLPHGGHLSHGFMTPKRRVS---GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 179 (447)
Q Consensus 109 -----pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~ 179 (447)
+| ++|++.+..+.|.............. +......+..++ ..|++++++.+.+ ++++|++++++
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~-~~~aii~e~~~ 197 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITP-NTVAFLVEPIQ 197 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCC-CeEEEEEcccc
Confidence 24 68887775543321000000000000 000000111111 2589999999976 89999998776
Q ss_pred CCC--CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC--CCCCC-cccEEEeCCCcccCC--CCCceEEeecCC
Q 013217 180 YPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG--PRGGMIFFKKDP 248 (447)
Q Consensus 180 ~~~--~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~--~~~~~-~~Di~~~s~~K~l~G--p~gG~i~~~~~~ 248 (447)
+++ ..+ +++|+++|++||+++|+|++|. |+...+.. ....+ ..|++++| |+|.| +++|++++++
T Consensus 198 ~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~-- 272 (401)
T PRK00854 198 GEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNS-- 272 (401)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcH--
Confidence 654 444 8999999999999999999985 54333310 00111 36888775 99854 3678899887
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeC-CCCCeeEEe
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNHLVLV 327 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~v 327 (447)
++.+.+.........++ +....++..++++.+... +..++..++.+++.+.|++.+...+.. .....++.+
T Consensus 273 ----~~~~~l~~~~~~~t~~~-~~~~~aa~~a~L~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i 344 (401)
T PRK00854 273 ----EVLGVLKPGQHGSTFGG-NPLACAVARAALKVLTEE---GMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAV 344 (401)
T ss_pred ----HHHhcccCCCCCCCCCc-CHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEE
Confidence 66666653322222333 444455555577665432 246777788888888888755432211 112333444
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.+.+...+..++.+.|.+.||.+... ..+.+|++++..++ ++|++++++.|++++.
T Consensus 345 ~~~~~~~~~~~~~~~L~~~GV~v~~~---------~~~~lR~~p~~~~t----~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 345 ELEPEAGGARQYCEALKERGLLAKDT---------HDHTIRLAPPLVIT----REQVDWALEQIAKVLA 400 (401)
T ss_pred EEecCchhHHHHHHHHHHCCeEEecC---------CCCEEEEeCCcccC----HHHHHHHHHHHHHHhh
Confidence 44332234577888888899998521 13589999987777 9999999999988764
No 243
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.82 E-value=2.3e-18 Score=176.47 Aligned_cols=291 Identities=15% Similarity=0.124 Sum_probs=198.6
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.+++.++++||++...+ +++|| .+|.++++++++|||+||+....|-+.+. .+.++|. +++.+.
T Consensus 199 eAe~~aA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~--------aLilsga--~PVYl~ 263 (713)
T PRK15399 199 EAEEYIARTFGAEQSYI-----VTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH--------LLMMSDV--VPIWLK 263 (713)
T ss_pred HHHHHHHHHhCCCcEEE-----EeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCC--eeEEec
Confidence 56788999999998633 26776 89999999999999999998776665431 3445665 333322
Q ss_pred cC-CCC---CCCCH-----HHHHHHhhhh----CCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEE-EEehhhhcccccc
Q 013217 149 LD-EST---GLVDY-----DMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALL-MMDMAHISGLVAA 213 (447)
Q Consensus 149 ~~-~~~---~~id~-----~~l~~~~~~~----~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~l-ivD~a~~~g~~~~ 213 (447)
.. +.. +.+++ +.+++++.++ +|+.++++.|+|-+ +.|++.|.++| |+.+ ++|+||++.+.+.
T Consensus 264 P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~ 340 (713)
T PRK15399 264 PTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFH 340 (713)
T ss_pred ccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcC
Confidence 11 111 24555 8999888752 35688888888877 78999999998 6776 6999998665443
Q ss_pred ccCC--CCCC---cccEE---EeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 214 SVVA--DPFK---YCDVV---TTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 214 ~~~~--~~~~---~~Di~---~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
+..+ +++. ++|.+ +-|+||+|++... ++|.++.. --.++++.+.....+++|++..+|++.+|.++
T Consensus 341 p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-----vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~ 415 (713)
T PRK15399 341 PIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-----YDEETFNEAFMMHTSTSPSYPIVASVETAAAM 415 (713)
T ss_pred cccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-----CCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 3222 2221 36766 9999999999876 88888653 12345655544445678999999999999988
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHHC-C------cEeeeC-------------C---------------CCCeeEEecC
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVEL-G------YKLVSG-------------G---------------SDNHLVLVDL 329 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~-------------~---------------~~~~~~~v~~ 329 (447)
+.....++.++...+.+..+++.|.+. + ++++.+ + -|.--+++..
T Consensus 416 m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t 495 (713)
T PRK15399 416 LRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILT 495 (713)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEe
Confidence 875445778888889999999988763 2 344321 0 0111122333
Q ss_pred C---------CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 330 R---------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 330 ~---------~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+ ..|+++..+.++|+++||.+.... ...+=+ +.+.|.++++++++.++|.+.-+
T Consensus 496 ~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 496 PGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLLF----LFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred cCcccccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence 2 337888999999999999997531 113333 23345559999999998877633
No 244
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.82 E-value=4.2e-18 Score=164.77 Aligned_cols=263 Identities=18% Similarity=0.165 Sum_probs=169.7
Q ss_pred HHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC
Q 013217 73 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 151 (447)
Q Consensus 73 ~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (447)
+.+++.+|.+ +|.+++|+ +++..++ .+.|||+|++.+|.|+.+.. .+...|. +++.+++
T Consensus 56 ~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~v~~-- 115 (330)
T PRK05664 56 AAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH--------AWRRAGH--QVRELDE-- 115 (330)
T ss_pred HHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEech--
Confidence 5677788864 35568998 7776554 46899999999998766531 2334454 5555433
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCc-ccE
Q 013217 152 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY-CDV 225 (447)
Q Consensus 152 ~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~-~Di 225 (447)
+++++.++ ++++++++.|+||+ ..+ +++|.++|+++|+++|+|+++. ............+. .-+
T Consensus 116 -------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~~~~~~~~~vi 185 (330)
T PRK05664 116 -------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSLAACAHRPGLI 185 (330)
T ss_pred -------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccccccccCCCEE
Confidence 34555553 67888888788886 555 4566667788999999999863 32211000010011 237
Q ss_pred EEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHH
Q 013217 226 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 303 (447)
Q Consensus 226 ~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~ 303 (447)
++.|++|++ +|.|.||+++++ ++.+.+.....+... +.....+...++.. ....+...+++.++++.
T Consensus 186 ~~~SfSK~~gl~GlRiG~~v~~~------~l~~~~~~~~~~~~~---~~~~~~~~~~~L~~--~~~~~~~~~~~~~~r~~ 254 (330)
T PRK05664 186 VLRSFGKFFGLAGARLGFVLAEP------ALLRALAELLGPWTV---SGPTRWLAQAALAD--TPWQRRQRERLLAASQR 254 (330)
T ss_pred EEeeccccccCCCcceEEEEeCH------HHHHHHHHhcCCCCC---CHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHH
Confidence 889999987 688889999987 677777665333221 22222233334432 12235567778888999
Q ss_pred HHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHH
Q 013217 304 LASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKE 383 (447)
Q Consensus 304 l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~d 383 (447)
+.+.|++.|++.. + ....++|+.+. +..++.+.|.++||.+... . .++++||++.. + +++
T Consensus 255 l~~~L~~~~~~~~-~-~~~~f~~~~~~----~~~~~~~~l~~~gi~v~~f----~----~~~~iRis~~~--~----~~~ 314 (330)
T PRK05664 255 LAALLRRHGLTPA-G-GCALFQWVRTE----DAAALHEFLARRGILTRLF----E----QPASLRFGLPA--D----EAD 314 (330)
T ss_pred HHHHHHHCCCccc-C-CcceEEEEecC----CHHHHHHHHHHCCeEEEEC----C----CCCeEEEECCC--C----HHH
Confidence 9999998876532 2 22345566542 5678888999999999631 1 13589999763 3 788
Q ss_pred HHHHHHHHHHHHH
Q 013217 384 FVAIADFIHEGVE 396 (447)
Q Consensus 384 i~~l~~~i~~~l~ 396 (447)
++++.++|++..+
T Consensus 315 ~~~l~~al~~~~~ 327 (330)
T PRK05664 315 WARLDQALLAYRK 327 (330)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999877654
No 245
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.82 E-value=3.9e-18 Score=169.19 Aligned_cols=300 Identities=19% Similarity=0.204 Sum_probs=194.6
Q ss_pred cCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh
Q 013217 27 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 106 (447)
Q Consensus 27 ~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al 106 (447)
..+..+++.+.+++...+... -+.++. +. ...++|+.+..+++++++++....+ +.++.||+||+.++.+.
T Consensus 69 ~~~~~~~~~a~~~~~~~~~~n--l~d~~~--~p---~a~~~E~~~v~~l~~l~~~~~~~~G--~~t~GgTean~lal~aa 139 (460)
T COG0076 69 FCPTRVPPVAAELLVSALNKN--LGDPDE--SP---AAAELEERVVNMLSDLLGAPEEASG--TFTSGGTEANLLALLAA 139 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhhc--CCCccc--Ch---hHHHHHHHHHHHHHHHhCCCCCCce--EEEcChHHHHHHHHHHH
Confidence 344456677777887777652 233332 22 3568899999999999999744332 33355569998776654
Q ss_pred cC-----C---CC------EEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCc-
Q 013217 107 LK-----P---HD------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK- 171 (447)
Q Consensus 107 ~~-----p---gd------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~k- 171 (447)
.. . +. +|+++.-.|.+. . +.+.+.|.+.+.++ .++.+..+|+++|++++++....
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~---~-----Kaa~~lG~~~~~v~--~~~~~~~id~~~l~~~i~~~t~~g 209 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSETAHFSF---E-----KAARYLGLGLRRVP--TVPTDYRIDVDALEEAIDENTIGG 209 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecCcchhHH---H-----HHHHHhCCCceeEE--eccCccccCHHHHHHHHHhhccCc
Confidence 11 1 11 566665444332 1 45567777666666 44446899999999999984333
Q ss_pred EEEEc--CCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccc-cccCC----CCCCcccEEEeCCCcccCCCCC-ceEE
Q 013217 172 LIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVVA----DPFKYCDVVTTTTHKSLRGPRG-GMIF 243 (447)
Q Consensus 172 lii~~--~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~-~~~~~----~~~~~~Di~~~s~~K~l~Gp~g-G~i~ 243 (447)
+|+.. .+.++...|+++|.++|+++++|++||+|. .|++. ..... ..++.+|.++.++||++..|.| |+++
T Consensus 210 ~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~-GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 210 VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAF-GGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccc-cceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 14444 333334789999999999999999999985 44432 21111 1234799999999999988988 9999
Q ss_pred eecCCcchhhHHHHhhh--ccCCC-------CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC-c
Q 013217 244 FKKDPVLGVELESAINN--AVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-Y 313 (447)
Q Consensus 244 ~~~~~~~~~~~~~~i~~--~~~~~-------~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 313 (447)
++++. .+.+.+.. ...++ ..|+......++.++.++.+..+||.+..++..+++++|++.|.+.| +
T Consensus 289 ~rd~e----~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~ 364 (460)
T COG0076 289 FRDEE----ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDF 364 (460)
T ss_pred EECHH----HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99851 13222221 11111 12333344667778888888888999999999999999999999976 9
Q ss_pred EeeeCCCCCeeEEecCCCCC-CC-HHHHHHHHhhcCeEEccC
Q 013217 314 KLVSGGSDNHLVLVDLRPMG-ID-GARVEKILDMASITLNKN 353 (447)
Q Consensus 314 ~~~~~~~~~~~~~v~~~~~~-~~-~~~~~~~L~~~gI~v~~~ 353 (447)
+++..+ .+.++.++.+. .+ ..+....+++.|..+...
T Consensus 365 e~~~~p---~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~~ 403 (460)
T COG0076 365 ELVNEP---ELPIVAFRLKDDEDTLADLSERLDRRGWQVPAQ 403 (460)
T ss_pred EeecCC---ccceEEEEcCCcccchhchHHHHHhcCceeecc
Confidence 988754 22333333211 12 344555666678877653
No 246
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.82 E-value=1.6e-18 Score=170.12 Aligned_cols=219 Identities=16% Similarity=0.133 Sum_probs=148.6
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
+|...|+ +++....+| ++++++.|.+. .+.++||+.|+.+++ ++++|||+|++.++.|++.+....
T Consensus 41 ~~~y~r~--~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~-- 106 (380)
T PRK06176 41 GYEYSRS--GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD-- 106 (380)
T ss_pred CCcccCC--CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH--
Confidence 3444443 456677887 57889999876 244599998887655 578999999999988876542110
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
..+...| +++..++ ..|++++++++++ +|++|++..|+||+ ..|+++|.++|+++|+++++|++++.
T Consensus 107 --~~~~~~g--i~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~ 175 (380)
T PRK06176 107 --KVLVKNG--LSCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT 175 (380)
T ss_pred --HHHHhcC--eEEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 0112223 3443322 2489999999987 89999998777775 78999999999999999999999865
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCC-CcHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGG-PHNHTIGGLAVCLK 283 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~-p~~~~~aal~~al~ 283 (447)
+.. ..|+. ++|++++|++|+++|+. ||+++++++ ++.+++...... .|. .+... .+..++
T Consensus 176 ~~~-----~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-----~~~~~~~~~~~~--~G~~~~~~~---~~l~~~ 240 (380)
T PRK06176 176 PYY-----QNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-----ALAQEIAFFQNA--IGGVLGPQD---SWLLQR 240 (380)
T ss_pred ccc-----CCccccCCCEEEecCceeccCCccceeeEEEecHH-----HHHHHHHHHHHH--hcCCCCHHH---HHHHHh
Confidence 432 22333 69999999999998875 588888664 565555432211 111 11111 111222
Q ss_pred HhcChhHHHHHHHHHHHHHHHHHHHHHC
Q 013217 284 HAQSPEFKVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (447)
.+ ..+..+++++.+|+..+++.|++.
T Consensus 241 gl--~tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 241 GI--KTLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred cc--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 235667888999999999999883
No 247
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.82 E-value=3.2e-18 Score=167.41 Aligned_cols=283 Identities=18% Similarity=0.182 Sum_probs=173.5
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +.++++++ .+ .+.++||+.|+..++.++++|||+|++.++.|++...... ..+...|
T Consensus 49 ~~p~~~~Le----~~lA~l~~--~~----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~----~~l~~~G 114 (366)
T PRK07582 49 SNPTWRALE----AALGELEG--AE----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAR----EYLAPLG 114 (366)
T ss_pred CCccHHHHH----HHHHHHcC--CC----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH----HHHhcCe
Confidence 344566776 46777772 22 4556999999999999999999999999887765421100 0111234
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
.+++.++.+. . .+ .+.+ ++++|+++.++||+ ..|+++|.++|+++|+++++|++|..+. + .
T Consensus 115 --~~v~~v~~~~-~----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~--~ 177 (366)
T PRK07582 115 --VTVREAPTAG-M----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G--Q 177 (366)
T ss_pred --EEEEEECCCC-h----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--c
Confidence 3555544431 1 11 2233 78999998888886 6799999999999999999999975321 1 1
Q ss_pred CCCC-cccEEEeCCCcccCCCCC---ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~g---G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|+||+++|+.| |+++++++ ++.+++...... ..+.++... + +.+++.+. .+..+
T Consensus 178 ~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-----~l~~~l~~~~~~-~g~~~~~~~-a--~l~~r~l~--tl~~R 246 (366)
T PRK07582 178 RPLELGADLVVASDTKALTGHSDLLLGYVAGRDP-----ELMAAVERWRLL-AGAIPGPFE-A--WLAHRSLG--TLGLR 246 (366)
T ss_pred CchhcCCcEEEecccccccCCCCeeEEEEEcCcH-----HHHHHHHHHHHH-hCCCCCHHH-H--HHHHhccc--cHHHH
Confidence 2333 589999999999988765 88887653 666665532211 112223222 1 22333333 25667
Q ss_pred HHHHHHHHHHHHHHHHH-CCcE-eeeCCCC---------------CeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCC
Q 013217 294 QNKVVSNCRALASRLVE-LGYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP 356 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~-~g~~-~~~~~~~---------------~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p 356 (447)
++++.+|+..+++.|++ +.+. +..++-. +.++.+++. +.+++.++|+..++.....++-
T Consensus 247 ~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~~~~~l~~~~~~~s~G 322 (366)
T PRK07582 247 FARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAERFVAASRLVVAATSFG 322 (366)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHHHHHhCCcceecccCC
Confidence 89999999999999998 3443 2222211 123334442 4567788888777755321111
Q ss_pred CC------C----CCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 357 GD------K----SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 357 ~~------~----~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
+. . ....++-||+|.+..+. ++.++.+.++|+
T Consensus 323 ~~~sl~~~~~~~~~~~~~~liR~svGlE~~----~dli~dl~~al~ 364 (366)
T PRK07582 323 GVHTSADRRARWGDAVPEGFVRLSCGIEDT----DDLVADLERALD 364 (366)
T ss_pred CccchhhhHHHcCCCCCCCeEEEEeccCCH----HHHHHHHHHHHh
Confidence 10 0 01223569999886554 555555555543
No 248
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.5e-18 Score=171.20 Aligned_cols=158 Identities=16% Similarity=0.204 Sum_probs=120.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++.++.+| +.++++.|... .+.+.||+.|+.+++.++++|||+|+++.+.|++..... ...+...|
T Consensus 59 ~nPtv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~----~~~l~~~G 125 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLF----GVSLRKLG 125 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHHHHHCC
Confidence 467788888 57889999876 244689999999999999999999999998887653210 00122334
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. ++..++ ..+|++++++++++ +||+|++..++||. ..|+++|+++|+++|+++++|++.... ...
T Consensus 126 i--~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-----~~~ 192 (432)
T PRK06702 126 I--DVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-----YLC 192 (432)
T ss_pred C--EEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-----hhC
Confidence 3 444432 24799999999988 99999998888886 779999999999999999999985322 223
Q ss_pred CCCC-cccEEEeCCCcccCCCCC---ceEE
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPRG---GMIF 243 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~g---G~i~ 243 (447)
.|+. ++||++.|.+|+++|..+ |.++
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEE
Confidence 4554 699999999999987654 5554
No 249
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=1.9e-18 Score=169.46 Aligned_cols=215 Identities=18% Similarity=0.157 Sum_probs=148.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| +.+++++|.+. .+.++||+.++.+++ ++++|||+|++.++.|++.+.... ..+...|
T Consensus 48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~----~~~~~~G 113 (377)
T PRK07671 48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT----KVLNRFG 113 (377)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH----HHHhcCC
Confidence 456667777 57899999875 244689988776554 678999999999988876532110 0112233
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
.+++.++ ..|++++++++++ +||+|+++.|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 114 --~~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~-----~ 179 (377)
T PRK07671 114 --IEHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW-----Q 179 (377)
T ss_pred --eEEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 3444432 2489999999987 89999999888875 77999999999999999999999754322 2
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.|+. ++|++++|++|+++|+. +|+++++++ ++.+++....... .+..+.. .+ +.+++.+. .+..+
T Consensus 180 ~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-----~l~~~~~~~~~~~-g~~~~~~-~a--~l~~~~l~--tl~~R 248 (377)
T PRK07671 180 SPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-----ELAEDLHFVQNST-GGILGPQ-DS--WLLLRGLK--TLGIR 248 (377)
T ss_pred ChhhhCCeEEEecCcccccCCccceeEEEEeCcH-----HHHHHHHHHHHhh-cCCCCHH-HH--HHHHcCcC--hHHHH
Confidence 2343 68999999999999885 487877664 5666555432211 1222221 11 22333332 25567
Q ss_pred HHHHHHHHHHHHHHHHH-CCc
Q 013217 294 QNKVVSNCRALASRLVE-LGY 313 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~-~g~ 313 (447)
++++.+|+..+.+.|++ +++
T Consensus 249 ~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 89999999999999987 344
No 250
>PRK05939 hypothetical protein; Provisional
Probab=99.82 E-value=5e-18 Score=167.23 Aligned_cols=219 Identities=16% Similarity=0.113 Sum_probs=146.3
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
|++....+| +.++++.|.+. .+.++||+.|+.+++.++++|||+|++.++.|+++..... .+...|
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~-----~l~~~G 110 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFG-----TLRGLG 110 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHH-----HHHhcC
Confidence 677788888 57889999876 3556899999999999999999999999988877642211 122334
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++. .|++++++++++ +|++|++++++||+ ..|+++|+++|+++|+++++|++|+.+...
T Consensus 111 ~--~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 176 (397)
T PRK05939 111 V--EVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF----- 176 (397)
T ss_pred C--EEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 3 4444332 489999999987 89999998777775 679999999999999999999998766431
Q ss_pred CCCC-cccEEEeCCCcccCCCCC--ceEEeecCC-c--chhhHH-------------HHhhhccCCCCCCCCcHHHHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPRG--GMIFFKKDP-V--LGVELE-------------SAINNAVFPGLQGGPHNHTIGGL 278 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~g--G~i~~~~~~-~--~~~~~~-------------~~i~~~~~~~~~g~p~~~~~aal 278 (447)
.|.. ++|+++.|+||+++|+.. |.+++.+.. . .+..+. ..+...... ..|+...+. .+
T Consensus 177 ~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~p~-~a- 253 (397)
T PRK05939 177 RPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLR-DMGATLSSE-AA- 253 (397)
T ss_pred CccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHH-hcCCCCCHH-HH-
Confidence 2332 699999999999987543 444443210 0 000000 111110000 012211111 11
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC
Q 013217 279 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 279 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (447)
+..++.+. .+..+++++.+|+..+++.|++.
T Consensus 254 ~l~~rgl~--tl~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 254 HRIAIGAE--TLALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred HHHHcCcC--cHHHHHHHHHHHHHHHHHHHHhC
Confidence 22333333 36678899999999999999884
No 251
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.8e-18 Score=169.35 Aligned_cols=154 Identities=20% Similarity=0.174 Sum_probs=115.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++..+.+| +.+++++|.+. .+.++||+.|+.+++.++++|||+|++....|++...... ..+...|
T Consensus 67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~----~~l~~~G 133 (436)
T PRK07812 67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFH----YTLPKLG 133 (436)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHH----HHhhcCe
Confidence 455667777 58899999876 3556899999999999999999999999877766431100 0011123
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
++++.++ + ..|++++++++++ +|++|++..++||. ..|+++|.++|+++|+++++|++|+.+.. .
T Consensus 134 --i~v~~vd-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~ 200 (436)
T PRK07812 134 --IEVSFVE-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----I 200 (436)
T ss_pred --EEEEEEC-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3444432 2 1389999999887 89999998777664 78999999999999999999999876644 2
Q ss_pred CCCC-cccEEEeCCCcccCCCCC
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPRG 239 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~g 239 (447)
.|+. ++|+++.|+||+++|+.+
T Consensus 201 ~pl~~GaDivv~S~tK~lgg~G~ 223 (436)
T PRK07812 201 RPLEHGADIVVHSATKYLGGHGT 223 (436)
T ss_pred CchhcCCCEEEEecccccCCCCC
Confidence 3444 699999999999977653
No 252
>PRK06460 hypothetical protein; Provisional
Probab=99.81 E-value=6.9e-18 Score=165.57 Aligned_cols=213 Identities=17% Similarity=0.162 Sum_probs=144.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++...++| +.+++++|.+.+ +.++||++|+..++.++++|||+|++..+.+++.+... ...+...|
T Consensus 43 ~~p~~~~L~----~~lA~l~g~~~~-----v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~----~~~~~~~G 109 (376)
T PRK06460 43 ANPTVLELT----KKIVELENAEMG-----VAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFF----TDYLKNWG 109 (376)
T ss_pred CCccHHHHH----HHHHHHhCCCcE-----EEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHH----HHHHHhhC
Confidence 345556666 678999998752 34588999999999999999999999877665432211 11223344
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. ++..++.+ +.+.+++++++ +||+|++++++||+ ..|+++|.++|+++|+++++|++++.+.. .
T Consensus 110 ~--~v~~~~~~------~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-----~ 175 (376)
T PRK06460 110 V--NVDASNPG------SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-----Q 175 (376)
T ss_pred c--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 4 33343332 23445555444 89999999888886 88999999999999999999999764421 1
Q ss_pred CCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 293 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~ 293 (447)
.++. ++|+++.|+||+++|++ +|+++.++ ++.+++.....+... +... ..+ +.+++.. ..++.+
T Consensus 176 ~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~------~l~~~l~~~~~~~g~-~~~~--~~a-~~~l~~~--~~l~~r 243 (376)
T PRK06460 176 KPLELGADIVVHSASKFLAGHNDVIAGLAAGYG------KLLNVIDQMRRTLGT-SLDP--HAA-YLTLRGI--KTLKIR 243 (376)
T ss_pred ChhhcCCCEEEeecceeccCCCCceEEEEecCH------HHHHHHHHHHHhcCC-CCCH--HHH-HHHHhch--hhHHHH
Confidence 1222 58999999999998875 68888876 677766543322211 1222 111 2233322 345778
Q ss_pred HHHHHHHHHHHHHHHHHC
Q 013217 294 QNKVVSNCRALASRLVEL 311 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~~ 311 (447)
++++.+|++.+++.|++.
T Consensus 244 ~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999999873
No 253
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=4.9e-18 Score=165.86 Aligned_cols=214 Identities=17% Similarity=0.061 Sum_probs=147.8
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccc
Q 013217 59 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 138 (447)
Q Consensus 59 ~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 138 (447)
.+++..+.+| ++++.+-+.+. .+.++||+.|+.+++.++++|||+|+++++.|+++..... ..+...
T Consensus 61 ~gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~----~~l~~~ 127 (395)
T PRK05967 61 RGTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD----TMLKRL 127 (395)
T ss_pred CCChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH----HHHHhc
Confidence 5677778887 56777776554 3556889999999999999999999999988877532100 012233
Q ss_pred cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccC
Q 013217 139 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 216 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~ 216 (447)
|. ++..++. -+.+.+++++++ +||+|++++++||. ..|+++|+++|+++|+++++|+++..+..
T Consensus 128 Gi--~v~~vd~------~~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~----- 193 (395)
T PRK05967 128 GV--EVEYYDP------EIGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY----- 193 (395)
T ss_pred Ce--EEEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-----
Confidence 43 4434322 135789999987 89999999887775 67999999999999999999999754422
Q ss_pred CCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 217 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 217 ~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
..|+. ++|+++.|.+|+++|.. +|+++.++ +..+++...... .|+...+. . .+..++.+. .+.-
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~------~~~~~l~~~~~~--~G~~~~p~-d-a~l~~rgl~--Tl~l 261 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE------KCWPQLLEAHGT--LGLCAGPD-D-TYQILRGLR--TMGI 261 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH------HHHHHHHHHHHH--cCCCCCHH-H-HHHHHcCcc--cHHH
Confidence 34555 69999999999987754 37666555 455544422111 12222111 1 222344433 3567
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 013217 293 YQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~ 311 (447)
+++++.+|+..+++.|++.
T Consensus 262 R~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 262 RLEHHRKSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8999999999999999883
No 254
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.81 E-value=2.1e-17 Score=163.38 Aligned_cols=323 Identities=18% Similarity=0.155 Sum_probs=194.9
Q ss_pred CeeEecC--CC---CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH
Q 013217 22 SLELIAS--EN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 96 (447)
Q Consensus 22 ~i~l~~~--~n---~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs 96 (447)
.|++..+ .| ..+|.+.+++.+.+... +....+ |. .+...+++ +++++++|.+. .+...||+
T Consensus 29 ~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~~-~~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg~ 94 (379)
T TIGR00707 29 YLDFVAGIAVNSLGHAHPKLVEALKEQLEKL---VHVSNL-YY-TEPQEELA----EKLVEHSGADR-----VFFCNSGA 94 (379)
T ss_pred EEEcCcchhhccCCCCCHHHHHHHHHHHhhc---cccccc-cC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcH
Confidence 4565442 34 33589999988776542 111122 22 23344454 68888999763 24457888
Q ss_pred HHHHHHHHHh---cC----CCCEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCC-C--CCCHHHHHHHh
Q 013217 97 PANFEVYTAI---LK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST-G--LVDYDMLEKTA 165 (447)
Q Consensus 97 ~a~~~~~~al---~~----pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~--~id~~~l~~~~ 165 (447)
+|+..++..+ .. +||+|+++++.|.++..... ...+.. +.....++..+. . ..|++++++.+
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 167 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGAL-------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAI 167 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHH-------HhcCChhhhccCCCCCCCceeeCCCCHHHHHHHh
Confidence 9999888755 22 47999999887655421110 000100 000001111110 1 12899999998
Q ss_pred hhhCCcEEEEcCCCCCC-C--C---ChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC-
Q 013217 166 ILFRPKLIIAGASAYPR-D--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR- 235 (447)
Q Consensus 166 ~~~~~klii~~~~~~~~-~--~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~- 235 (447)
.+ ++++|+++++++++ . . ++++|.++|+++|+++++|++|. |+...+.. . .... ..|+++ ++|+++
T Consensus 168 ~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~ 243 (379)
T TIGR00707 168 DD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDIIT--LAKGLGG 243 (379)
T ss_pred hh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEEE--EcccccC
Confidence 77 89999997555443 2 2 26899999999999999999984 54332211 0 0011 246654 579985
Q ss_pred CCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEe
Q 013217 236 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 315 (447)
Q Consensus 236 Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 315 (447)
|.|.|+++.++ ++.+.+.........+ .+....++..++++.+... ++.+++.++++.+++.|.+.+...
T Consensus 244 G~riG~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~aa~aaL~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~ 313 (379)
T TIGR00707 244 GVPIGATLAKE------EVAEAFTPGDHGSTFG-GNPLACAAALAVLEVIEKE---RLLENVKEKGDYFKERLEELGKNY 313 (379)
T ss_pred CcccEEEEEcH------HHHhhhcCCCCCCCCC-CCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhhC
Confidence 56779999887 6777766532222222 3445555666677765432 356677778888888877643222
Q ss_pred e-eC-CCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 316 V-SG-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 316 ~-~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
. .. .....++++.+.. +..++.+.|.++||.+.. . ..+.+|++++..++ +++++++.+.|++
T Consensus 314 ~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~v~~----~-----~~~~lRi~~~~~~t----~~~i~~~~~~l~~ 377 (379)
T TIGR00707 314 PNKEVRGKGLMLGIELEA---PCKDIVKKALEKGLLVNC----A-----GPKVLRFLPPLIIT----KEEIDEAVSALEE 377 (379)
T ss_pred CCCccccCceEEEEEecC---cHHHHHHHHHHCCcEEee----C-----CCCEEEEECCCcCC----HHHHHHHHHHHHH
Confidence 1 10 0123445666543 357888889999999953 1 13589999887676 9999999999977
Q ss_pred HH
Q 013217 394 GV 395 (447)
Q Consensus 394 ~l 395 (447)
++
T Consensus 378 ~~ 379 (379)
T TIGR00707 378 AI 379 (379)
T ss_pred hC
Confidence 53
No 255
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=7.2e-18 Score=167.55 Aligned_cols=152 Identities=20% Similarity=0.216 Sum_probs=117.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++.+.++| +.++++.|.++. +.+.||+.|+.+++.+++++||+|++++..|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~a-----v~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~----~~l~~~G 128 (433)
T PRK08134 62 SNPTVAVLE----ERVAALEGGVGA-----IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLH----YTLRRFG 128 (433)
T ss_pred cChHHHHHH----HHHHHHhCCCcE-----EEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHH----HHHhhCC
Confidence 456677777 578899998762 446899999999999999999999999988876532100 0011233
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
++++.++.+ |++++++++++ +||+|++..++||+ ..|+++|+++|+++|+++++|++|+.+...
T Consensus 129 --i~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~----- 194 (433)
T PRK08134 129 --IETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL----- 194 (433)
T ss_pred --eEEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----
Confidence 355554332 79999999987 99999998777774 789999999999999999999999877552
Q ss_pred CCCC-cccEEEeCCCcccCCCC
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPR 238 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~ 238 (447)
.|+. ++|++++|.||+++|+.
T Consensus 195 ~pl~~GaD~vv~S~tK~l~g~g 216 (433)
T PRK08134 195 RPFEHGADLVYHSATKFLGGHG 216 (433)
T ss_pred CchhcCCCEEEeccccccCCCC
Confidence 3444 69999999999997765
No 256
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=7.2e-18 Score=167.45 Aligned_cols=166 Identities=22% Similarity=0.188 Sum_probs=120.3
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
+|...|+ +++....+| +.++++.|.+. .+.++||++|+.+++.++++|||+|++..+.|++.+....
T Consensus 49 ~~~y~r~--~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~-- 115 (425)
T PRK06084 49 GNIYTRI--MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLA-- 115 (425)
T ss_pred CccccCC--CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHH--
Confidence 3444443 445566777 57889999764 2446899999999999999999999999888775432110
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
..+...| +++..++ ..|++++++++++ +|++|++.+++||+ ..|+++|.++|+++|+++++|++|+.
T Consensus 116 --~~l~~~g--i~v~~~d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~ 184 (425)
T PRK06084 116 --HTLPRIG--IETRFAA------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVAT 184 (425)
T ss_pred --Hhcccce--eEEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 0111122 2333322 2489999999987 89999998777775 77999999999999999999999876
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEee
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 245 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~ 245 (447)
+.. ..|+. ++|++++|+||+++|+. ||+++.+
T Consensus 185 ~~~-----~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~ 220 (425)
T PRK06084 185 PVL-----CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDS 220 (425)
T ss_pred ccc-----CChhhcCCCEEEECchhcccccccceeEEEEeC
Confidence 643 23444 59999999999998764 3656543
No 257
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.80 E-value=1.4e-18 Score=169.09 Aligned_cols=225 Identities=24% Similarity=0.248 Sum_probs=150.4
Q ss_pred CCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcc
Q 013217 50 EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFM 129 (447)
Q Consensus 50 ~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~ 129 (447)
.+|...| .|++....+| ++++++.|.+. .+...||..|+.+++.+++++||+|++.+..|++......
T Consensus 45 ~~~~Y~R--~gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~- 112 (386)
T PF01053_consen 45 KGYIYSR--YGNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLE- 112 (386)
T ss_dssp SSCSBTT--TC-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHH-
T ss_pred CCcceec--cccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhh-
Confidence 3444444 4678888888 57888998864 2445899999999999999999999999887776532110
Q ss_pred ccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhC-CEEEEehhh
Q 013217 130 TPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAH 206 (447)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g-~~livD~a~ 206 (447)
......| +++..+ | .-|++++++++++ ++++|++..+.||. ..|+++|+++|+++| +++++|.+.
T Consensus 113 ---~~l~~~g--v~v~~~--d----~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 113 ---ELLPRFG--VEVTFV--D----PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp ---HCHHHTT--SEEEEE--S----TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTT
T ss_pred ---hhhcccC--cEEEEe--C----chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccc
Confidence 0111223 344442 2 2589999999988 99999999888887 789999999999999 999999986
Q ss_pred hccccccccCCCCCC-cccEEEeCCCcccCCCC---CceEEeec-CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHH
Q 013217 207 ISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK-DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVC 281 (447)
Q Consensus 207 ~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~-~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~a 281 (447)
+.+. ...|+. ++|+++.|.+|++.|.. +|.+++++ + ++.+++..... ..|....+ ..+ +..
T Consensus 181 atp~-----~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~-----~~~~~l~~~~~--~~G~~~~p-~da-~ll 246 (386)
T PF01053_consen 181 ATPY-----NQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS-----ELYDRLREFRR--LLGATLSP-FDA-WLL 246 (386)
T ss_dssp THTT-----TC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH-----HHHHHHHHHHH--HHT-B--H-HHH-HHH
T ss_pred ccee-----eeccCcCCceEEEeeccccccCCcceeeEEEEECchh-----hhhhhhcchhh--hcCccchH-HHH-HHH
Confidence 5542 234555 69999999999998876 48888765 2 55555543211 11221111 111 223
Q ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcE
Q 013217 282 LKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 282 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
++.+. .+.-++++..+|+..+++.|++. .+.
T Consensus 247 ~rgl~--Tl~~R~~~~~~nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 247 LRGLR--TLPLRMERQNENAEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHT--THHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred hcCCC--cHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 44443 36778999999999999999984 443
No 258
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.80 E-value=1.7e-17 Score=155.60 Aligned_cols=295 Identities=21% Similarity=0.201 Sum_probs=202.5
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----C----CCCEEEEecCCCCcccCCCccccccccccccce
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----K----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 141 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~----~----pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 141 (447)
..++|++++.|.+. +.+|+.+|+++-++-++.+- . ..+.||+++-.||-+.. ...+. +
T Consensus 113 ~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA--------SAam~--G 178 (496)
T COG1003 113 ELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA--------SAAMA--G 178 (496)
T ss_pred HHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh--------hHhhc--C
Confidence 34479999999997 68999999966555444431 2 33689999888876532 12233 4
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCC
Q 013217 142 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 219 (447)
Q Consensus 142 ~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~ 219 (447)
++++.++.+ ++|.+|+|+|++++.+ ++..+.++.|++-+ ..++.+|+++.+++|..|..|+|..-+++.. ..|
T Consensus 179 ~~VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~---~rP 253 (496)
T COG1003 179 FKVVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL---ARP 253 (496)
T ss_pred ceEEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc---ccc
Confidence 688888887 6789999999999986 88888888887777 4589999999999999999999965443321 233
Q ss_pred CC-cccEEEeCCCcccCCCCC------ceEEeecCCcchhhHHHHhhh----------c----------cCCCCCCCCcH
Q 013217 220 FK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINN----------A----------VFPGLQGGPHN 272 (447)
Q Consensus 220 ~~-~~Di~~~s~~K~l~Gp~g------G~i~~~~~~~~~~~~~~~i~~----------~----------~~~~~~g~p~~ 272 (447)
-+ ++|++-...||||+.|.| |-|.++.. +...+-. . .....+|+..+
T Consensus 254 Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~------L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i 327 (496)
T COG1003 254 GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH------LAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI 327 (496)
T ss_pred cccccceEEeecccccccCCCCCCCCCCceehHhh------ccccCCCCcccCCCccccccCCCCccceeeccccCcchH
Confidence 33 689999999999975543 56776652 2221111 0 00001233332
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCC--CCeeEEecCC----CCCCCHHHHHHHHhhc
Q 013217 273 HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS--DNHLVLVDLR----PMGIDGARVEKILDMA 346 (447)
Q Consensus 273 ~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~~~~~v~~~----~~~~~~~~~~~~L~~~ 346 (447)
..++ +.-++.+..+|++...+.-.-|+++++++|+. .+++...+. ..|-+++|.+ ..|++..++.++|.++
T Consensus 328 l~~a--~~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~ 404 (496)
T COG1003 328 LPIA--WAYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDY 404 (496)
T ss_pred HHHH--HHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhc
Confidence 2221 22234455567788888889999999999987 566654333 5688888887 3578889999999999
Q ss_pred CeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 347 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 347 gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
|+..-..+.|. ...+.+-|-.... -+++++|++++++..+.+.+..
T Consensus 405 GfHaPT~~FPl----iV~~tLMIEPTEs----Esk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 405 GFHAPTMYFPL----IVAGTLMIEPTES----ESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred CCCCCcccCcc----ccccceeecCCCC----CCHHHHHHHHHHHHHHHHHHHh
Confidence 99864433342 1234555544333 3499999999999888876643
No 259
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.80 E-value=5.7e-18 Score=165.29 Aligned_cols=212 Identities=16% Similarity=0.116 Sum_probs=144.6
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccc
Q 013217 59 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 138 (447)
Q Consensus 59 ~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 138 (447)
.+++.++++| ++++++.|.+. .+.++||+.|+.+++.++++|||+|+++...|++.+... ...+...
T Consensus 61 ~~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~----~~~~~~~ 127 (384)
T PRK06434 61 WGNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF----NKVLKTL 127 (384)
T ss_pred CCChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHHhc
Confidence 3678889998 57889999875 356699999999999999999999999877666654211 0122233
Q ss_pred cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccC
Q 013217 139 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 216 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~ 216 (447)
| ++++.+++++. ..++ ++..++++|++..+.||+ ..|+++|+++|+++| +++|+++..+. .
T Consensus 128 G--i~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~-----~ 190 (384)
T PRK06434 128 G--IHVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY-----N 190 (384)
T ss_pred C--cEEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc-----c
Confidence 4 35555555421 1122 222378999998777665 789999999999998 56799975442 2
Q ss_pred CCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 217 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 217 ~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
..|++ ++|++++|.||+++|+. ||+++++++ ++.+++...... .|......-|+ ..++.+. .+..
T Consensus 191 ~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-----~~~~~~~~~~~~--~G~~~~~~~A~--l~~~gL~--tL~~ 259 (384)
T PRK06434 191 QNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-----SIFNNLVERRKT--LGSNPDPIQAY--LALRGLK--TLGL 259 (384)
T ss_pred CCchhcCCCEEEeecccccCCCCCceEEEEecCcH-----HHHHHHHHHHHh--cCCCCCHHHHH--HHHhCCC--cHHH
Confidence 33454 69999999999998865 688888664 666655432111 12211122222 2344443 4678
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 013217 293 YQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~~ 311 (447)
++++..+++..+++.|++.
T Consensus 260 R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 260 RMEKHNKNGMELARFLRDS 278 (384)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999883
No 260
>PLN02368 alanine transaminase
Probab=99.80 E-value=1.2e-17 Score=165.06 Aligned_cols=243 Identities=10% Similarity=0.044 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCccceeeecCCcH-HHHHHHHHHhc-CCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 64 IDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-PANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs-~a~~~~~~al~-~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
...+.+.+.+++.+.+|.+ ++ +|.+|+|+ +++..++.+++ +|||+|++.+|.|..+.. .+...|
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~----~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~--------~~~~~g 176 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPE----LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA--------TISLLG 176 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChh----hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH--------HHHHcC
Confidence 3455555556777777754 44 45568887 78888899987 799999999998876532 234555
Q ss_pred ceeEEEecccCC-CCCCCCHHHHHHHhhhh-----CCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhc
Q 013217 140 IYFESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 140 ~~~~~~~~~~~~-~~~~id~~~l~~~~~~~-----~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~ 208 (447)
. +++++++++ +++.+|++++++.+++. ++|+++++.|+||+ ..+ +++|.++|++||+++|+|+++ .
T Consensus 177 ~--~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y-~ 253 (407)
T PLN02368 177 G--TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVY-Q 253 (407)
T ss_pred C--EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccc-c
Confidence 4 556666654 34789999999988642 68988888788886 444 578888899999999999985 5
Q ss_pred ccccccc--CCCC------C----C-c-ccEEEeCCCccc---CCCCCceEEe---ecCCcchhhHHHHhhhccCCCCCC
Q 013217 209 GLVAASV--VADP------F----K-Y-CDVVTTTTHKSL---RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQG 268 (447)
Q Consensus 209 g~~~~~~--~~~~------~----~-~-~Di~~~s~~K~l---~Gp~gG~i~~---~~~~~~~~~~~~~i~~~~~~~~~g 268 (447)
.+++.+. +.+. + . + .-+++.|++|++ +|+|.||+++ ++ ++.+.+...... ..+
T Consensus 254 ~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~------~li~~~~~~~~~-~~~ 326 (407)
T PLN02368 254 QNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP------KTVEEIYKVASI-ALS 326 (407)
T ss_pred ccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH------HHHHHHHHHhcc-cCC
Confidence 5554331 1110 0 0 1 237789999986 5999999985 44 566666654211 223
Q ss_pred CCcHHHHHHHHHHHHHhc--Ch---hH----HHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCeeEEecCC
Q 013217 269 GPHNHTIGGLAVCLKHAQ--SP---EF----KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 269 ~p~~~~~aal~~al~~~~--~~---~~----~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~ 330 (447)
++.....++..+++.-. .. .+ +++.+.+.++++.+.+.|++. |+.+..+ ...+++|.++.
T Consensus 327 -~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P-~Gafy~~~~i~ 396 (407)
T PLN02368 327 -PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT-EGAMYSFPQIK 396 (407)
T ss_pred -CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC-CeeeEeccCCC
Confidence 33333333344553210 00 12 335677788889999999984 8876543 44666776664
No 261
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=9.4e-18 Score=166.79 Aligned_cols=159 Identities=21% Similarity=0.161 Sum_probs=118.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++....+| +.++++.|.+. .+.++||+.|+.+++.++++|||+|++.++.|++.+... ...+...|
T Consensus 62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~----~~~~~~~G 128 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLF----AHTLPKLG 128 (431)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHH----HHHHHhCC
Confidence 456677787 57889999765 355689999999999999999999999998887653211 01122234
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
.+++.++. .|++++++++++ ++++|++.+++||+ ..|+++|.++|+++|+++++|++++.+.. .
T Consensus 129 --v~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-----~ 194 (431)
T PRK08248 129 --ITVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-----L 194 (431)
T ss_pred --EEEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----C
Confidence 35555432 489999999987 89999998777775 78999999999999999999999764432 2
Q ss_pred CCCC-cccEEEeCCCcccCCCCC---ceEEee
Q 013217 218 DPFK-YCDVVTTTTHKSLRGPRG---GMIFFK 245 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp~g---G~i~~~ 245 (447)
.|+. ++|+++.|+||+++|+.. |+++.+
T Consensus 195 ~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 195 RPIEHGADIVVHSATKFIGGHGTSIGGVIVDS 226 (431)
T ss_pred ChhHcCCCEEEEcCccccCCCCCceEEEEEeC
Confidence 3333 699999999999987752 445433
No 262
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=1.5e-17 Score=165.51 Aligned_cols=156 Identities=23% Similarity=0.257 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccc
Q 013217 61 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 140 (447)
Q Consensus 61 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (447)
++....+| +.++++.|.+. .+.++||++|+.+++.++++|||+|++..+.|++...... ..+...|
T Consensus 62 ~p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~----~~~~~~G- 127 (427)
T PRK05994 62 NPTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFG----HAFKSFG- 127 (427)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHH----HHHHhcC-
Confidence 34566676 57889999875 3456999999999999999999999999988876532110 0112233
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCC
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 218 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~ 218 (447)
++++.++. .|++++++++++ +|++|++.+++||+ ..|+++|.++|+++|+++++|++|+.+.. ..
T Consensus 128 -~~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~~ 194 (427)
T PRK05994 128 -WQVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----IR 194 (427)
T ss_pred -cEEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 34444332 388999999987 89999998777775 78999999999999999999999876643 23
Q ss_pred CCC-cccEEEeCCCcccCCCCC---ceEE
Q 013217 219 PFK-YCDVVTTTTHKSLRGPRG---GMIF 243 (447)
Q Consensus 219 ~~~-~~Di~~~s~~K~l~Gp~g---G~i~ 243 (447)
|+. ++|+++.|+||+++|+.+ |+++
T Consensus 195 pl~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 PIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred ccccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 444 699999999999987764 5554
No 263
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.80 E-value=2.9e-17 Score=159.40 Aligned_cols=265 Identities=18% Similarity=0.183 Sum_probs=172.1
Q ss_pred HHHHHHHcCCCC-CccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEeccc
Q 013217 72 QKRALAAFNLDE-NKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 149 (447)
Q Consensus 72 ~~~~~~~~g~~~-~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 149 (447)
++.+++++|.+. + +|.+++|+ +++..+ ..+++||| |++.+|.|+.+.. .+...|. ++++++.
T Consensus 59 ~~~ia~~~~~~~~~----~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~--------~~~~~g~--~~~~v~~ 122 (339)
T PRK06959 59 AACAARYYGAPDAA----HVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAP--------AFARHGH--RVVPLDE 122 (339)
T ss_pred HHHHHHHhCCCCcc----cEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHH--------HHHHCCC--EEEeecc
Confidence 367889999974 4 45569998 676644 45678887 7788887765431 2334454 5555544
Q ss_pred CCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHH---HHHhCCEEEEehhhhccccccccCCCCCCc-c
Q 013217 150 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQI---ADAVGALLMMDMAHISGLVAASVVADPFKY-C 223 (447)
Q Consensus 150 ~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~i---a~~~g~~livD~a~~~g~~~~~~~~~~~~~-~ 223 (447)
+. +. +.+ ++++++++.||||+ ..+.+++.++ |++++.++|+|+++. .+....-.....+. -
T Consensus 123 ~~-------~~----~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~~~~~~~~~ 189 (339)
T PRK06959 123 AA-------DT----LPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASLAAHTDRPG 189 (339)
T ss_pred cc-------hh----ccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccchhccCCCC
Confidence 31 22 222 46788888888886 6666655554 567899999999964 33321100000011 1
Q ss_pred cEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHH
Q 013217 224 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSN 300 (447)
Q Consensus 224 Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~ 300 (447)
-+++.|++|.+ +|.|.||+++++ ++.+.+.+...+... +.....+...+++ ...+ ++..+++.++
T Consensus 190 vi~l~SfSK~~gl~GlRiGy~v~~~------~li~~l~~~~~~~~v---s~~~q~a~~~~L~---~~~~~~~~~~~~~~~ 257 (339)
T PRK06959 190 LVVLRSVGKFFGLAGVRAGFVLAAP------ALLAALRDALGAWTV---SGPARHAVRAAFA---DAAWQAAMRERLAAD 257 (339)
T ss_pred EEEEecChhhcCCcchheEEEecCH------HHHHHHHHhcCCCCC---cHHHHHHHHHHhC---cHHHHHHHHHHHHHH
Confidence 27889999986 688889999987 788887765433221 2223333333443 2333 5667888888
Q ss_pred HHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCC
Q 013217 301 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 380 (447)
Q Consensus 301 ~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~ 380 (447)
++.+.+.|.+.|+++.. ...++|+++. +..++.+.|.++||.++.. + ..+++||+.. .+
T Consensus 258 r~~l~~~L~~~g~~~~~---~~~f~~~~~~----~~~~l~~~l~~~GI~vr~~---~-----~~~~lRisi~--~~---- 316 (339)
T PRK06959 258 GARLAALLRAHGFAVHA---TPLFSWTDDP----RAAALHAALARRGIWTRYF---A-----PPPSVRFGLP--AD---- 316 (339)
T ss_pred HHHHHHHHHHCCCCccC---cceEEEEeCC----CHHHHHHHHHhCCeEEEEC---C-----CCCeEEEECC--CC----
Confidence 99999999998887652 2455677753 4567888999999999632 1 1348999852 23
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013217 381 EKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~~~ 398 (447)
.+|++++.++|++++...
T Consensus 317 ~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 317 EAEWQRLEDALAECVPTL 334 (339)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 789999999998877654
No 264
>PRK08354 putative aminotransferase; Provisional
Probab=99.80 E-value=6.1e-17 Score=155.44 Aligned_cols=291 Identities=15% Similarity=0.097 Sum_probs=172.3
Q ss_pred cCeeEecCCCCC-CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HH
Q 013217 21 KSLELIASENFT-SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 98 (447)
Q Consensus 21 ~~i~l~~~~n~~-~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a 98 (447)
..|+|..++|+. |+.+.+++...+.. ..+||.. ..+ ++++++.+|. +|.+|+|+ ++
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~--~~~yp~~---------~~l----~~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI--SGRYTYY---------EWL----EEEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH--hhcCCCh---------HHH----HHHHHHHHCC-------CEEECCCHHHH
Confidence 457888888865 67778888665432 2244421 223 3577788873 34458887 77
Q ss_pred HHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 99 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 99 ~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~ 178 (447)
+..++. ++.+||+|++.+|.|+++.. .+...|. +++.+ .+|++.+++.++ ++++++++.|
T Consensus 67 l~~~~~-~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 67 LYLIGI-LALRDRKVIIPRHTYGEYER--------VARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHHH-hhCCCCeEEEeCCCcHHHHH--------HHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEecC
Confidence 776654 44599999999998877632 2334443 44332 368899988775 5678888878
Q ss_pred CCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCccc--CCCCCceEEeecCCcch
Q 013217 179 AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 251 (447)
Q Consensus 179 ~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~ 251 (447)
+||+ ..+ +++|.++|+++|+++|+|+++ .++...+.... ..-.+++.|++|++ +|.|.|++++..
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y-~~f~~~~~~~~--~~~vi~~~S~SK~~~l~GlRiG~~v~~~----- 198 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAF-IDFVKKPESPE--GENIIKLRTFTKSYGLPGIRVGYVKGFE----- 198 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcc-hhccccccccC--CCcEEEEeccHhhcCCccceeeeeeehH-----
Confidence 8886 444 567778889999999999995 45443321111 12357889999986 688889998733
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeCCCCCeeEEecCC
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~ 330 (447)
+....+ ..+... +....+++...++ .+++ ++.++.+.+.+..+.. +.-.. . ++..++++++.
T Consensus 199 -~~l~~~---~~~~~~---~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~l~~~l~~-~-~~~~~~~~~~~ 261 (311)
T PRK08354 199 -EAFRSV---RMPWSI---GSTGYAFLEFLIE----DDFE----HLRKTMPLIWREKERFEKALYV-K-SDANFFIKDVG 261 (311)
T ss_pred -HHHHHc---CCCccC---CHHHHHHHHHHHH----hHHH----HHHHHHHHHHHHHHHHHHhcCC-C-CCCcEEEEECC
Confidence 322222 222111 2222222221221 1221 1222222222222210 11111 2 22334456543
Q ss_pred CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 331 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 331 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+..++.+.|.++||.+..+..++ .++++||++.. .++.+++.+++++.
T Consensus 262 ----~~~~~~~~l~~~gv~v~~g~~f~-----~~~~iRi~~~~-------~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 ----DAEKFVEFLKRNGILVRDCTSFG-----LPGYIRFSVRD-------REENEKLIRALREW 309 (311)
T ss_pred ----CHHHHHHHHHHCCeEEEecccCC-----CCCeEEEEeCC-------HHHHHHHHHHHHHh
Confidence 45678888889999996543221 24689998653 67788888888764
No 265
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.79 E-value=9.3e-17 Score=159.39 Aligned_cols=307 Identities=13% Similarity=0.095 Sum_probs=186.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++...+.. +.... +.. ..+...+++ ++++++++.+. .+.++||++|+.+++....
T Consensus 57 ~~p~v~~ai~~~~~~-~~~~~---~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADK-VTLTS---RAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhh-ccccc---ccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 368999988877654 22111 111 112223333 56777776543 2446899999998887652
Q ss_pred -----CCC-CEEEEecCCCCcccCCCccccccccccccce-----eE-----EEecccCCCCCCCCHHHHHHHhhhhCCc
Q 013217 108 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-----SMPYRLDESTGLVDYDMLEKTAILFRPK 171 (447)
Q Consensus 108 -----~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~-----~~~~~~~~~~~~id~~~l~~~~~~~~~k 171 (447)
++| ++|+..+-.+.|... + .+.+++.. +. +..++ ..|++++++++++ +++
T Consensus 123 ~~~g~~~~r~~ii~~~~~~HG~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~-~~~ 188 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNFHGRTM-A------AVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEALKAAITP-NTA 188 (396)
T ss_pred hccCCCCCCCEEEEECCCcCCCCH-H------HHhhcCCcccccCCCCCCCCceEeC------CCCHHHHHHhccc-CeE
Confidence 144 678887654433210 0 11111110 00 01111 1278999998876 889
Q ss_pred EEEEcCCCCCC--CCC----hHHHHHHHHHhCCEEEEehhhhcccccccc-CCC-CCC-cccEEEeCCCcccCC--CCCc
Q 013217 172 LIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCDVVTTTTHKSLRG--PRGG 240 (447)
Q Consensus 172 lii~~~~~~~~--~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~-~~~-~~Di~~~s~~K~l~G--p~gG 240 (447)
+|+++++++++ ..+ +++|.++|+++|+++++|++|. |+...+. ... ... ..|++++ +|.+++ .+.|
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig 265 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPIS 265 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcce
Confidence 99998765553 333 7899999999999999999985 4432221 110 011 2577765 598854 5679
Q ss_pred eEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeC-C
Q 013217 241 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-G 319 (447)
Q Consensus 241 ~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~ 319 (447)
++++++ ++.+.+.........++ +....++..++++.+.+++ +.++..++.++|.+.|++.+...+.. .
T Consensus 266 ~~~~~~------~i~~~~~~~~~~~t~~~-~~~~~aaa~aaL~~~~~~~---l~~~~~~~~~~l~~~L~~l~~~~i~~~~ 335 (396)
T PRK04073 266 CVAANR------DILGVFTPGSHGSTFGG-NPLACAVSIAALEVLEEEK---LPERSLELGEYFKEQLKEIDNPMIKEVR 335 (396)
T ss_pred EEEEcH------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhcCCccccee
Confidence 999887 67776654322222333 4444454455777654433 34566677888888888754322211 0
Q ss_pred CCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 320 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
....++.+++.. +..++.+.|.++||.+... ..+.||++++...+ ++|++++++.|++++
T Consensus 336 ~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~~~---------~~~~iRi~p~l~~t----~e~i~~~~~~l~~~l 395 (396)
T PRK04073 336 GRGLFIGVELNE---PARPYCEALKEEGLLCKET---------HETVIRFAPPLVIT----KEELDWAFEKIKAVL 395 (396)
T ss_pred cceEEEEEEecc---hHHHHHHHHHHCCeEEecC---------CCCEEEEECCcccC----HHHHHHHHHHHHHHh
Confidence 123344555532 4567888888899998531 13589999988877 999999999998765
No 266
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=8.9e-18 Score=157.84 Aligned_cols=324 Identities=19% Similarity=0.181 Sum_probs=211.5
Q ss_pred ecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHH
Q 013217 26 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 104 (447)
Q Consensus 26 ~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~ 104 (447)
-.+..++.+.+.+++.. |.-...+.|..-| .....++| +..++++|.+.+ +....|...|.+.+.
T Consensus 150 a~~~g~ca~~~~~~~~k-----ygl~~css~~e~G~~~~hkelE----~l~A~f~g~e~a-----~vF~mGf~TNs~~~p 215 (519)
T KOG1357|consen 150 AQSVGPCAEASLKSFDK-----YGLSRCSSRHEAGTTEEHKELE----ELVARFLGVEDA-----IVFSMGFATNSMNIP 215 (519)
T ss_pred cccCCcCChHHHHHHHH-----hcccccccchhcccHHHHHHHH----HHHHHhcCCcce-----EEEeccccccccCcc
Confidence 34444556788887754 3333444444333 34455666 678899999873 335888888888999
Q ss_pred HhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhh---------hCC--cEE
Q 013217 105 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---------FRP--KLI 173 (447)
Q Consensus 105 al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~---------~~~--kli 173 (447)
+++.||.-|+...+.|.+... .++++|+..++.. .+ |+++||+++++ ++| |++
T Consensus 216 ~l~~~gsLIiSDelNHaSi~~--------GaRLSgAtiRVfk--HN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~ 279 (519)
T KOG1357|consen 216 SLLGKGSLIISDELNHASLIT--------GARLSGATTRVFR--HN------DMQGLERLLRDAIVYGQPKTHRPWKKIL 279 (519)
T ss_pred eeecCCcceeeccccchheec--------cccccCceEEEEe--cC------CHHHHHHHHHHHHhcCCCCcCCcchhee
Confidence 999999999999999887653 3467777444433 32 45555555543 233 455
Q ss_pred EEcC---CCCCCCCChHHHHHHHHHhCCEEEEehhhhcccccc-c--cCC-CCC--CcccEEEeCCCcccCCCCCceEEe
Q 013217 174 IAGA---SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVA-DPF--KYCDVVTTTTHKSLRGPRGGMIFF 244 (447)
Q Consensus 174 i~~~---~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~-~--~~~-~~~--~~~Di~~~s~~K~l~Gp~gG~i~~ 244 (447)
++.. |.-..+.++.++.++++++.++++.|+||+.|.+.. | +.. ... ..+|++.+++.|++ |--||++.+
T Consensus 280 iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiag 358 (519)
T KOG1357|consen 280 ICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAG 358 (519)
T ss_pred eeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecC
Confidence 5553 333347899999999999999999999999998743 2 111 111 15889999999986 556899999
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCCCcH-HHHHHHHHHHHHhcC----hhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCC
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGGPHN-HTIGGLAVCLKHAQS----PEFKVYQNKVVSNCRALASRLVELGYKLVSGG 319 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~p~~-~~~aal~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 319 (447)
++ ++.+.+.........++... +...-...+++.+.. ...++..+++.+|+++++..|+..|+-+.+.
T Consensus 359 sk------~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~- 431 (519)
T KOG1357|consen 359 SK------ELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGN- 431 (519)
T ss_pred cH------HHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecC-
Confidence 98 67776654322222233222 222223345555542 2347888999999999999999999877654
Q ss_pred CCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 320 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
.++..+.+-+.....- ..+.+.|.+.+|.+-....|. .|...++.|++.++.++ .|+++++.+.+.++
T Consensus 432 ~dSpVvplll~~~~k~-~~f~r~~l~~nigvVvvgfPa--tpl~e~r~R~c~Sa~ht----~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 432 NDSPVVPLLLYGPAKI-VAFSREMLERNIGVVVVGFPA--TPLLESRARFCLSASHT----KEDLDRALEVIDRV 499 (519)
T ss_pred CCCCcceeeecCcccc-cHHHHHHHhcCceEEEEeCCC--chHHHhHHHhhhccccc----HHHHHHHHHHHhhh
Confidence 4565443333222222 356666666666553322332 34556789999888888 89999888877664
No 267
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.79 E-value=8.3e-17 Score=154.87 Aligned_cols=335 Identities=16% Similarity=0.175 Sum_probs=213.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC-CC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-PH 110 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~-pg 110 (447)
+|++.+++|.. |...|++.+.+..+| +.++++||.+. .+.+++|..++..++..+++ ||
T Consensus 55 pS~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~g 114 (467)
T TIGR02617 55 VTQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKRE 114 (467)
T ss_pred CCHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhccccc
Confidence 57888888763 223356777778888 57888999986 35568999999999999988 79
Q ss_pred CEEEEecC----CCCcccCCCccccccccccccceeEEEecc------cC-CCCCCCCHHHHHHHhhhh---CCcEEEEc
Q 013217 111 DRIMGLDL----PHGGHLSHGFMTPKRRVSGTSIYFESMPYR------LD-ESTGLVDYDMLEKTAILF---RPKLIIAG 176 (447)
Q Consensus 111 d~Vl~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~-~~~~~id~~~l~~~~~~~---~~klii~~ 176 (447)
|++.+... .|..|+..+ ...+.+.|.....++.+ ++ +..|.+|+++|+++++++ +.-.+...
T Consensus 115 ~e~g~~~~~~~v~hn~~fett----~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~t 190 (467)
T TIGR02617 115 QEKGLDRSKMVAFSNYFFDTT----QGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVAT 190 (467)
T ss_pred ccccccccccccceEEEEecc----hHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeee
Confidence 98885443 333333211 01233445422221111 11 235789999999999863 22233332
Q ss_pred CCCC--CC-CC---ChHHHHHHHHHhCCEEEEehhhhcc-c--------cccccCCCC-----CCcccEEEeCCCcccCC
Q 013217 177 ASAY--PR-DF---DYPRMRQIADAVGALLMMDMAHISG-L--------VAASVVADP-----FKYCDVVTTTTHKSLRG 236 (447)
Q Consensus 177 ~~~~--~~-~~---~~~~i~~ia~~~g~~livD~a~~~g-~--------~~~~~~~~~-----~~~~Di~~~s~~K~l~G 236 (447)
-++| ++ ++ ++.+++++|++||+.++.|+|..+- . .+.+..... +.++|.++.|++|.+..
T Consensus 191 lt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgA 270 (467)
T TIGR02617 191 ITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMV 270 (467)
T ss_pred EEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCC
Confidence 1222 22 44 4578888999999999999986542 2 122221111 24689999999999999
Q ss_pred CCCceEEeecCCcchhhHHHHhhhcc--CCC--CCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC
Q 013217 237 PRGGMIFFKKDPVLGVELESAINNAV--FPG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 312 (447)
Q Consensus 237 p~gG~i~~~~~~~~~~~~~~~i~~~~--~~~--~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 312 (447)
|-||+++++++. +.++.++++... +.| ++|+...-.+.|++..|.+...+ +|......+.++|.+.|.+.|
T Consensus 271 pvGg~Lag~d~~--~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~---~yl~~ri~qv~yl~~~L~~~G 345 (467)
T TIGR02617 271 PMGGLLCFKDDS--FFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL---DWLAYRINQVQYLVNGLEEIG 345 (467)
T ss_pred cccceEEecchh--HHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccH---HHHHHHHHHHHHHHHHHHhCC
Confidence 999999999850 001223333211 112 25777777888999889887654 457777788899999999999
Q ss_pred cEeeeCCCCCeeEEecCCC-------CCCCHHHHHHHH-hhcCeEE-ccCCC-----CCCCCCCC--CCeEEEecCcccc
Q 013217 313 YKLVSGGSDNHLVLVDLRP-------MGIDGARVEKIL-DMASITL-NKNSV-----PGDKSALV--PGGIRIGSPAMTT 376 (447)
Q Consensus 313 ~~~~~~~~~~~~~~v~~~~-------~~~~~~~~~~~L-~~~gI~v-~~~~~-----p~~~~~~~--~~~iRig~~~~~~ 376 (447)
+.++. +..|-+++|... ....++.+.-.| .+.||-. ..+++ |....... -.-+|+..|.
T Consensus 346 vpi~~--~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipR--- 420 (467)
T TIGR02617 346 VVCQQ--AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPR--- 420 (467)
T ss_pred CcEEe--cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecccc---
Confidence 99876 457877777432 122344454444 5677753 22222 21111111 1358987663
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 377 RGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 377 ~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
|-.+.+.|+++++.+..+.++...
T Consensus 421 rvyt~~h~d~v~~~~~~~~~~~~~ 444 (467)
T TIGR02617 421 ATYTQTHMDFIIEAFKHVKENAPN 444 (467)
T ss_pred ccccHhHHHHHHHHHHHHHhhhhh
Confidence 445689999999999998887643
No 268
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.79 E-value=3.5e-17 Score=157.36 Aligned_cols=226 Identities=22% Similarity=0.219 Sum_probs=155.8
Q ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccc
Q 013217 51 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 130 (447)
Q Consensus 51 g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~ 130 (447)
+|...| .+++..+.+| +.++.+-|.+. .+.+.||..|+..++.+++++||+|+..+..|++.+...
T Consensus 54 ~~~Y~R--~~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~--- 119 (396)
T COG0626 54 GYDYSR--TGNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLF--- 119 (396)
T ss_pred Cccccc--CCCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHH---
Confidence 444443 4578888998 57778878775 344699999999999999999999999988888764211
Q ss_pred cccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 131 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
.......| +++.. +| .-|.+++++++.+.+||+|++.+|.||. ..|+++|+++|+++|+.+++|.+.+.
T Consensus 120 -~~~l~~~g--i~~~~--~d----~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfat 190 (396)
T COG0626 120 -EKILQKFG--VEVTF--VD----PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFAT 190 (396)
T ss_pred -HHHHHhcC--eEEEE--EC----CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccc
Confidence 01111122 34433 22 1345566666664489999999888897 78999999999999999999998654
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCCCCC---ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp~g---G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
+ +...|++ ++||++.|..|.+.|..- |+++++++ ++.+.+....... .|+...+. -| +..++-
T Consensus 191 P-----~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-----~~~~~~~~~~~~~-~G~~l~p~-dA-~l~lRG 257 (396)
T COG0626 191 P-----VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-----ELYELLFFAQRAN-TGAVLSPF-DA-WLLLRG 257 (396)
T ss_pred c-----cccChhhcCCCEEEEeccccccCCcceeeeEEecChH-----HHHHHHHHHHHhh-cCCCCCHH-HH-HHHHhc
Confidence 4 3345666 699999999999988643 76776664 5666552222211 12211111 11 445555
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHH-CCcE
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
+.+ +.-+++++.+|+..+++.|++ +.++
T Consensus 258 lkT--L~~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 258 LRT--LALRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred cch--HHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 543 567899999999999999998 3443
No 269
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.79 E-value=9.8e-17 Score=160.46 Aligned_cols=327 Identities=17% Similarity=0.115 Sum_probs=191.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
.+|.|.+++.+.+... ..++.. ++..+ ......+.++++++.+.+. .+.++||++|+..++..+ ..+
T Consensus 53 ~~p~v~~a~~~~~~~~--~~~~~~--~~~~~----~~~~l~~~l~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~~~ 121 (413)
T cd00610 53 NHPEVVEALKEQLAKL--THFSLG--FFYNE----PAVELAELLLALTPEGLDK---VFFVNSGTEAVEAALKLARAYTG 121 (413)
T ss_pred CCHHHHHHHHHHHHhC--cCccCc--ccCCH----HHHHHHHHHHHhCCCCCCE---EEEcCcHHHHHHHHHHHHHHHcC
Confidence 4799999988877431 111111 01122 2233446888999865443 244688889999998876 367
Q ss_pred CCEEEEecCCCCcccCCCccccccc-c--ccccceeEEEecccCC-----CCCCCCHHHHHHHhhhh--CCcEEEEcCCC
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRR-V--SGTSIYFESMPYRLDE-----STGLVDYDMLEKTAILF--RPKLIIAGASA 179 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~-~--~~~g~~~~~~~~~~~~-----~~~~id~~~l~~~~~~~--~~klii~~~~~ 179 (447)
+|+|++.++.|.|............ . ........++.++.++ ..+..|+++|++.++++ ++++|++.+.+
T Consensus 122 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~ 201 (413)
T cd00610 122 RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQ 201 (413)
T ss_pred CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcccc
Confidence 9999999887655421110000000 0 0000001223333321 11345899999988762 56777776544
Q ss_pred CC-C-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCC-CCCceEEeecCCc
Q 013217 180 YP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPV 249 (447)
Q Consensus 180 ~~-~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~G-p~gG~i~~~~~~~ 249 (447)
++ + ..+ +++|.++|+++|+++++|++|. |+...+.. . ...+ ..|++++ +|++++ .+.|+++.++
T Consensus 202 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~t~--sK~l~~g~~~g~~~~~~--- 275 (413)
T cd00610 202 GEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIVTL--GKGLGGGLPLGAVLGRE--- 275 (413)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeEEE--cccccCccccEEEEEcH---
Confidence 43 3 455 8999999999999999999984 43222110 0 0011 2466644 599864 5568888877
Q ss_pred chhhHHHHh--hhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCc--EeeeC-CCCCee
Q 013217 250 LGVELESAI--NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLVSG-GSDNHL 324 (447)
Q Consensus 250 ~~~~~~~~i--~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~--~~~~~-~~~~~~ 324 (447)
++.+.+ ......+.. +.+...+++..++++.+... ++.+++.++.+++.+.|++... .++.. .....+
T Consensus 276 ---~~~~~~~~~~~~~~~t~-~~~~~~~~a~~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 348 (413)
T cd00610 276 ---EIMDAFPAGPGLHGGTF-GGNPLACAAALAVLEVLEEE---GLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLM 348 (413)
T ss_pred ---HHHHhhccCCCCCCCCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceE
Confidence 677765 222121222 23344455555677766542 3467777888888888876321 22211 112345
Q ss_pred EEecCCCCC-------CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 325 VLVDLRPMG-------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 325 ~~v~~~~~~-------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+++.+.... .....+.+.|.++||.+... . +..+|++++..++ ++|++++++.|.+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~----~-----~~~lR~~~~~~~t----~~~i~~~~~~l~~~l 413 (413)
T cd00610 349 IGIELVKDRATKPPDKELAAKIIKAALERGLLLRPS----G-----GNVIRLLPPLIIT----EEEIDEGLDALDEAL 413 (413)
T ss_pred EEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeec----C-----CCEEEEECCCcCC----HHHHHHHHHHHHHhC
Confidence 555554321 24566888888999999542 1 3579999887777 999999999987653
No 270
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.79 E-value=1.9e-16 Score=156.93 Aligned_cols=312 Identities=15% Similarity=0.111 Sum_probs=186.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh----c
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al----~ 107 (447)
-.|.|.+++.+.+.+.+..+ ..+ ..+...+++ ++++++++.+. .+.++||++|+..++.++ .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~ 113 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---NLY--RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY 113 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---ccc--CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence 47999999888776422111 111 122222333 56777765442 244689999999988766 4
Q ss_pred CCCC----EEEEecCCCCcccCCCccccccccccccceeEEEec-ccCCCCC----CCCHHHHHHHhhhhCCcEEEEcCC
Q 013217 108 KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTG----LVDYDMLEKTAILFRPKLIIAGAS 178 (447)
Q Consensus 108 ~pgd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~----~id~~~l~~~~~~~~~klii~~~~ 178 (447)
++|| +|++.++.|.|..... ....+.......+ +.. .+. ..|++++++++++ ++++|++.+.
T Consensus 114 ~~G~~~r~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~ 184 (389)
T PRK01278 114 GKGHPERYRIITFEGAFHGRTLAT-------IAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIEPI 184 (389)
T ss_pred hcCCCCCCEEEEECCCcCCCcHHH-------HhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence 6777 8999888765542111 1111110000000 011 111 2689999999976 8999999865
Q ss_pred CCCC--C----CChHHHHHHHHHhCCEEEEehhhhcccccccc-CCC-CCC-cccEEEeCCCcccC-CCCCceEEeecCC
Q 013217 179 AYPR--D----FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 248 (447)
Q Consensus 179 ~~~~--~----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~-~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~ 248 (447)
++++ . ..+++|+++|++||+++|+|++|. |+...+. ... ... ..|++ +++|.++ |.+.|++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~-- 259 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE-- 259 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH--
Confidence 5443 2 257999999999999999999974 5533331 110 011 24655 5569984 66789999887
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcE-eee--CCCCCe
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVS--GGSDNH 323 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~--~~~~~~ 323 (447)
++.+.+.......+.+ .+....++..++++.+.+++ +.+++.++.+.+.+.|++. ... ++. .+ ...
T Consensus 260 ----~~~~~~~~~~~~~t~~-~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g-~G~ 330 (389)
T PRK01278 260 ----EAAKGMTPGTHGSTYG-GNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRG-KGL 330 (389)
T ss_pred ----HHHhccCCCCCCCCCC-ccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEec-ccE
Confidence 6766665433222333 34444555555677664333 3445556666666666541 111 221 11 123
Q ss_pred eEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 324 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+.++.+.. +..++.+.|.+.||.+. |+. .+.+|++++...+ +++++++++.|++++.
T Consensus 331 ~~~i~~~~---~~~~~~~~l~~~GV~~~----p~~-----~~~lR~~p~~~~~----~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 331 LLGLKCVV---PNRDLVQALRDEGLLTV----GAG-----DNVVRLLPPLIIT----EEEIDEALERLERAAE 387 (389)
T ss_pred EEEEEEec---CHHHHHHHHHHCCeEEe----ecC-----CCEEEEeCCcccC----HHHHHHHHHHHHHHHH
Confidence 33444422 45678888878899984 331 3589999876666 9999999999988875
No 271
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.79 E-value=2.1e-16 Score=157.17 Aligned_cols=312 Identities=19% Similarity=0.125 Sum_probs=191.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcHHHHHHHHHHhcCCC-
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILKPH- 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs~a~~~~~~al~~pg- 110 (447)
+|.+.+++.+.+.. + +....+| .... ..++ .++++++++.+ ++. .+.++||++|+..++.....+|
T Consensus 61 ~p~v~~ai~~~~~~-~--~~~~~~~-~~~~-~~~l----a~~l~~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~g~ 128 (398)
T PRK03244 61 HPAVVEAVTRQLAT-L--GHVSNLF-ATEP-QIAL----AERLVELLGAPEGGR---VFFCNSGAEANEAAFKLARLTGR 128 (398)
T ss_pred CHHHHHHHHHHHHh-c--cCccCcc-CCHH-HHHH----HHHHHHhCCCCCCCE---EEEeCchHHHHHHHHHHHHHHCC
Confidence 68999998887764 2 1112222 2111 1233 35788888854 232 2335778899999988766676
Q ss_pred CEEEEecCCCCcccCCCccccccccccccce----------eEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCC
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 180 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~ 180 (447)
++|+..+..|.|.... .....+.. ..+..++ ..|++++++++.+ ++++|++.++.+
T Consensus 129 ~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~~~~-~~~aviiep~~~ 194 (398)
T PRK03244 129 TKIVAAEGGFHGRTMG-------ALALTGQPAKRAPFEPLPGGVEHVP------YGDVDALAAAVDD-DTAAVFLEPIQG 194 (398)
T ss_pred CeEEEECCCcCCccHH-------HHhccCCcccccCCCCCCCCceEeC------CCCHHHHHHhhcC-CeEEEEEecccC
Confidence 4677666555443110 01111110 0111111 1388999998865 789999986655
Q ss_pred CC--CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-CCCC-C-cccEEEeCCCcccC-CCCCceEEeecCCcc
Q 013217 181 PR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPF-K-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVL 250 (447)
Q Consensus 181 ~~--~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~~~-~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~~ 250 (447)
++ ..+ +++|.++|++||+++|+|++|. |+...+.. .... . ..|++++ +|+|+ |.+.|+++.++
T Consensus 195 ~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~---- 267 (398)
T PRK03244 195 EAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFG---- 267 (398)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcH----
Confidence 53 444 8899999999999999999984 54322211 1011 1 2577755 59985 45668888887
Q ss_pred hhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCC-CCCeeEEecC
Q 013217 251 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-SDNHLVLVDL 329 (447)
Q Consensus 251 ~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~v~~ 329 (447)
++.+.+.........+. +....++...+++.+... ++.+++.+..++|.+.|++.++..+... ....+.++.+
T Consensus 268 --~~~~~~~~~~~~~t~~~-~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~ 341 (398)
T PRK03244 268 --PAADLLTPGLHGSTFGG-NPVACAAALAVLDTIASE---GLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVL 341 (398)
T ss_pred --HHHhhccCCCCcCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEE
Confidence 67776654322222332 344455555566655433 3466777778889999988654322210 1234556666
Q ss_pred CCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 330 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 330 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
... ....+.+.|.++||.+... ....||++++..++ ++|++++++.|++++...
T Consensus 342 ~~~--~~~~~~~~l~~~Gv~~~~~---------~~~~iR~~p~~~~t----~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 342 TAP--VAKAVEAAAREAGFLVNAV---------APDVIRLAPPLIIT----DAQVDAFVAALPAILDAA 395 (398)
T ss_pred ecc--HHHHHHHHHHHCCeEEeec---------CCCEEEEECCCcCC----HHHHHHHHHHHHHHHHhc
Confidence 421 3567888888999998542 13589999988777 999999999999988743
No 272
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.78 E-value=2.7e-17 Score=163.68 Aligned_cols=160 Identities=21% Similarity=0.174 Sum_probs=118.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccccccc
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 139 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 139 (447)
+++...++| +++++++|.+. .+.++||+.|+..++.+++++||+|++.++.|++.+... ...+...|
T Consensus 55 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G 121 (418)
T TIGR01326 55 MNPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF----KHTLKRLG 121 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHHHHHcC
Confidence 345566776 68899999764 355689999999999999999999999998887653211 01122334
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
. +++.++. .|++++++++++ ++++|++..++||+ ..|+++|.++|+++|+++++|++++.+.. .
T Consensus 122 ~--~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-----~ 187 (418)
T TIGR01326 122 I--EVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-----C 187 (418)
T ss_pred c--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-----C
Confidence 3 4444332 289999999987 89999998888875 77999999999999999999999865532 2
Q ss_pred CCCC-cccEEEeCCCcccCCC--CCceEEeec
Q 013217 218 DPFK-YCDVVTTTTHKSLRGP--RGGMIFFKK 246 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~Gp--~gG~i~~~~ 246 (447)
.|+. ++|++++|++|+++|+ +-|++++++
T Consensus 188 ~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 188 RPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CchhcCCeEEEECccccccCCccceEEEEEec
Confidence 3333 5899999999999654 336666643
No 273
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=1.1e-16 Score=170.44 Aligned_cols=275 Identities=15% Similarity=0.112 Sum_probs=178.6
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCc-HHHHHHHHHHh-cCCC--CEEEEecCCCCcccCCCccccccccccccceeEEE
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 145 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~al-~~pg--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 145 (447)
..+..+++++|++.++ +..+.+ |.+..++++++ +.+| |+|++.+.+|+++...... .....| ++++
T Consensus 152 ~~Qt~ia~LtG~~~an----aSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t----~a~~~G--ieV~ 221 (993)
T PLN02414 152 NYQTMITDLTGLPMSN----ASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQT----RADGLG--LEVV 221 (993)
T ss_pred HHHHHHHHHhCCChhh----EeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHH----hhhhcC--CEEE
Confidence 4568899999999753 333444 46666676666 5544 7899999899877543210 111233 3444
Q ss_pred ecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cc
Q 013217 146 PYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 223 (447)
Q Consensus 146 ~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~ 223 (447)
.++++. .| ...+ .+-.+++..+++.+ ..|+++|+++||++|+++++ +++..++.... .|-. ++
T Consensus 222 ~v~~~~----~~------~~~~-~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~---~pge~GA 286 (993)
T PLN02414 222 VADEKD----FD------YSSG-DVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLK---PPGEWGA 286 (993)
T ss_pred Eecchh----hc------cccC-ceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC---CHhhccC
Confidence 433321 11 1111 23344455555555 77999999999999999999 67666655321 1222 69
Q ss_pred cEEEeCCCccc-----CCCCCceEEeecCCcchhhHHHHhhh-cc--------CCC--------------CCCCCcHHHH
Q 013217 224 DVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINN-AV--------FPG--------------LQGGPHNHTI 275 (447)
Q Consensus 224 Di~~~s~~K~l-----~Gp~gG~i~~~~~~~~~~~~~~~i~~-~~--------~~~--------------~~g~p~~~~~ 275 (447)
||+++++|||+ +||+.|++++++ ++...+.. .+ .+. ..+|.+....
T Consensus 287 Di~vgsgqKwg~P~G~GGP~aGflavr~------~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~ 360 (993)
T PLN02414 287 DIVVGSAQRFGVPMGYGGPHAAFLATSQ------EYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTA 360 (993)
T ss_pred cEEEECCCccccCCCCCCCCeeEEEECH------HHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHH
Confidence 99999999997 677779999998 34332210 00 000 1345555333
Q ss_pred HHHHHHH-----HHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEE
Q 013217 276 GGLAVCL-----KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 350 (447)
Q Consensus 276 aal~~al-----~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v 350 (447)
.++.+++ ..+...|.++..+++...+.++++.|.+.|+++..+ .....+.+.+. +..++.+.|.++||.+
T Consensus 361 qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~-~~f~~vt~~~~----~~~~v~~~L~~~gI~l 435 (993)
T PLN02414 361 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSL-PFFDTVKVKCS----DADAIADAAAKVGINL 435 (993)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCC-CCcCeEEEecC----CHHHHHHHHHHCCCee
Confidence 3333332 233446788888999999999999998889888654 22233444432 4578999999999988
Q ss_pred ccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 351 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 351 ~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
+... .+.+|+|++.++| ++||+++++++..
T Consensus 436 ~~~~---------~~~lrvs~~e~~T----~edId~L~~~l~~ 465 (993)
T PLN02414 436 RVVD---------ANTVTVSFDETTT----LEDVDKLFKVFAG 465 (993)
T ss_pred EEec---------CCeEEEEeeccCC----HHHHHHHHHHHcc
Confidence 6421 2469999999999 9999999999963
No 274
>PRK08637 hypothetical protein; Provisional
Probab=99.78 E-value=5.7e-17 Score=160.50 Aligned_cols=276 Identities=14% Similarity=0.141 Sum_probs=164.2
Q ss_pred eeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccc-ccccceeEEEecccCCCCCCCCHHHHHHHhh
Q 013217 89 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAI 166 (447)
Q Consensus 89 ~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~ 166 (447)
+|.+|+|+ +++..++.++++|||+|++.+|.|+.+.. .+ ...|. +++++++..+++.+|++++++.++
T Consensus 71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~~g~--~vv~v~~~~~~~~~d~~~l~~~~~ 140 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFNTRRGA--EIVTYPIFDEDGGFDTDALKEALQ 140 (388)
T ss_pred eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHhcCC--EEEEecccCCCCcCCHHHHHHHHH
Confidence 34568887 88888889999999999999998776532 11 12343 566666632345689999998886
Q ss_pred --hhCC-cEEEEcCCCCCC--CCC---hHHHHHHHHH-----hCCEEEEehhhhccccccccCCCC----C-C-ccc---
Q 013217 167 --LFRP-KLIIAGASAYPR--DFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASVVADP----F-K-YCD--- 224 (447)
Q Consensus 167 --~~~~-klii~~~~~~~~--~~~---~~~i~~ia~~-----~g~~livD~a~~~g~~~~~~~~~~----~-~-~~D--- 224 (447)
..++ ++++++.|+||+ ..+ +++|.++|++ +++++|+|+++ .++.+.+....+ + + .-.
T Consensus 141 ~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~vi~ 219 (388)
T PRK08637 141 AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY-FGLFYEDSYKESLFAALANLHSNILA 219 (388)
T ss_pred hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccc-hhcccCCccchhhHHHhhcccccceE
Confidence 2234 456666788886 444 5677777765 89999999985 555443321111 0 1 112
Q ss_pred EEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhc----cCCCCCCCCcHHHHHHHHHHHHHhcChhHHH----HH
Q 013217 225 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV----YQ 294 (447)
Q Consensus 225 i~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~----~~~~~~g~p~~~~~aal~~al~~~~~~~~~~----~~ 294 (447)
+.+.|++|.+ +|.|.||+++........++.+.+... ...... +.+....+++..++. ...+.+ ..
T Consensus 220 i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~---~~~~~~~~~~~~ 295 (388)
T PRK08637 220 VKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNIS-NGPHPSQSAVLRALN---SPEFDKEKQEKF 295 (388)
T ss_pred EEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccC-CCCcHHHHHHHHHhC---CHHHHHHHHHHH
Confidence 2345999964 688899998652000000455555431 111111 223333333333332 233322 23
Q ss_pred HHHHHHHHHHHHHHHHC----CcEeeeCCCCCeeEEecCCCCCCCHHHHHHHH-hhcCeEEccCCCCCCCCCCCCCeEEE
Q 013217 295 NKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRI 369 (447)
Q Consensus 295 ~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi 369 (447)
..+.++.+.+.+.|.+. ++.+..+ ..+.++|+.+. +.+..++.+.| +++||.+.. . ..+.+|+
T Consensus 296 ~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~l~--~~~~~~l~~~l~~~~gv~~~~----~-----~~~~iRi 363 (388)
T PRK08637 296 QILKERYEKTKEVLYDGKYDDAWQAYPF-NSGYFMCLKLK--GVDAEELRVHLLEKYGIGTIA----L-----NETDLRI 363 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcccccc-cceEEEEecCC--hHHHHHHHHHHhhhcceEEEe----c-----cCCceEE
Confidence 34455555666667554 4554443 34566777774 33556777766 578998742 1 2457999
Q ss_pred ecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 370 GSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 370 g~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
++.... +++++..++.|.++++
T Consensus 364 ~~~~~~-----~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 364 AFSCVE-----EEDIPELFDSIYKAIK 385 (388)
T ss_pred EeecCC-----HHHHHHHHHHHHHHHH
Confidence 876432 7888888888877775
No 275
>PRK07049 methionine gamma-lyase; Validated
Probab=99.77 E-value=7.6e-17 Score=160.40 Aligned_cols=217 Identities=18% Similarity=0.149 Sum_probs=147.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccc
Q 013217 61 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 140 (447)
Q Consensus 61 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (447)
++....+| +.++++.|.+. .+.++||++|+.+++.++++|||+|++..+.|+++..... ..+...|
T Consensus 82 ~Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~G- 147 (427)
T PRK07049 82 HPNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFG- 147 (427)
T ss_pred CcCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcC-
Confidence 44456777 57888998764 3556889899999999999999999999998887632100 0011223
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhh----hCCcEEEEcCCCCCC--CCChHHHHHHHHH------hCCEEEEehhhhc
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--DFDYPRMRQIADA------VGALLMMDMAHIS 208 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~----~~~klii~~~~~~~~--~~~~~~i~~ia~~------~g~~livD~a~~~ 208 (447)
.+++.+. + ..|++++++.+.+ .+||+|++++++||+ ..|+++|.++|+. +++++++|++...
T Consensus 148 -i~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 148 -VGAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred -cEEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 2444432 1 2577888776642 378999999899987 7899999999988 7999999998432
Q ss_pred cccccccCCCCCC-cccEEEeCCCcccCC---CCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH
Q 013217 209 GLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 284 (447)
Q Consensus 209 g~~~~~~~~~~~~-~~Di~~~s~~K~l~G---p~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~ 284 (447)
. . ...|+. ++|+++.|++|+++| .++|+++.++ ++.+.+.....+. .++.+..... .+++.
T Consensus 222 ~-~----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~------~l~~~l~~~~~~~-g~~ls~~~a~---l~~r~ 286 (427)
T PRK07049 222 P-V----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK------ALIRQVRALRSAI-GTQLDPHSCW---MLGRS 286 (427)
T ss_pred c-c----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH------HHHHHHHHHHHhc-CCCCCHHHHH---HHHcC
Confidence 2 2 122333 589999999999875 4679998776 6777665533222 1222222211 22333
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHHC-CcE
Q 013217 285 AQSPEFKVYQNKVVSNCRALASRLVEL-GYK 314 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 314 (447)
+. .+..+++++.+++..+++.|++. ++.
T Consensus 287 L~--tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 287 LE--TLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred CC--hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 32 35677888899999999999883 543
No 276
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.77 E-value=6e-16 Score=154.08 Aligned_cols=318 Identities=14% Similarity=0.115 Sum_probs=187.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
.+|.|.+++.+.+.. +..+. ..++ .+... .+.+.++++++.+. .+.++||++||..++....
T Consensus 48 ~~p~v~~a~~~~~~~-~~~~~--~~~~--~~~~~----~~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LTLTS--RAFY--NDVLG----LAEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-ccccc--cccc--CHHHH----HHHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 489999999887653 22121 1111 12223 34467778887653 3446999999999888663
Q ss_pred ------CCCCEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCC---CCCCCHHHHHHHhhhhCCcEEEEcC
Q 013217 108 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA 177 (447)
Q Consensus 108 ------~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~---~~~id~~~l~~~~~~~~~klii~~~ 177 (447)
..+++|+..+-.+.|.... .+...+.. ......+..+. -...|++++++.++..++++|++.+
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIG-------ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHH-------HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 1357888877554332110 11111110 00000000000 0124899999998634789999876
Q ss_pred CCCCC--CCC----hHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCCC--cccEEEeCCCcccCCC--CCceEEeec
Q 013217 178 SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--YCDVVTTTTHKSLRGP--RGGMIFFKK 246 (447)
Q Consensus 178 ~~~~~--~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~~--~~Di~~~s~~K~l~Gp--~gG~i~~~~ 246 (447)
+++++ ..+ +++|.++|++||+++|+|++| .|+...+. ...... ..|++++| |+++++ +.|++++++
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~-~g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQ-TGLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND 263 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH
Confidence 55443 455 899999999999999999997 44432221 111111 25777765 998643 569999988
Q ss_pred CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC----CcE-eeeCCCC
Q 013217 247 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYK-LVSGGSD 321 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~ 321 (447)
++.+.+.........++ +....++...+++.+.++++ .++..+..+.+++.|++. ++. .+.+ .
T Consensus 264 ------~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~--~ 331 (400)
T PTZ00125 264 ------DVMLVIKPGEHGSTYGG-NPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIRG--K 331 (400)
T ss_pred ------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEec--c
Confidence 67776654322222332 33334444456766554343 445555667777777652 221 1121 2
Q ss_pred CeeEEecCCC-CCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 322 ~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..+.++.+.. .+.+...+.+.|.++||.+.. + ....||++++...+ ++|++++.+.|.+++...
T Consensus 332 g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----~~~~lRi~~~~~~~----~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 332 GLLNAIVFDHSDGVNAWDLCLKLKENGLLAKP----T-----HDNIIRFAPPLVIT----KEQLDQALEIIKKVLKSF 396 (400)
T ss_pred cEEEEEEEccCcchHHHHHHHHHHHCCeEEee----c-----CCCEEEEECCccCC----HHHHHHHHHHHHHHHHHH
Confidence 3344554532 233456677888889999843 2 23589999886666 999999999999888754
No 277
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.77 E-value=3.4e-16 Score=150.22 Aligned_cols=337 Identities=13% Similarity=0.068 Sum_probs=212.7
Q ss_pred hhcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHH
Q 013217 19 QFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 97 (447)
Q Consensus 19 ~~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~ 97 (447)
+++..++.|++..+|++|++++.+.+.+.-..|..-. ..+.+.++.+.++ .+.+.++++|+.+.+.- +.+...+||.
T Consensus 2 ~~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~-~~~~~Lr~Ll~~P~~y~-Vlfl~GggT~ 79 (364)
T PRK12462 2 HRNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLA-QAEADLRDLLGIPDEYG-VVFLQGGSSL 79 (364)
T ss_pred CcccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHH-HHHHHHHHHhCCCCCCe-EEEEeccHHH
Confidence 4567899999999999999999987776322222111 1234455555554 67789999999954332 4455677889
Q ss_pred HHHHHHHHhcCCCCEEE-EecCCCCcccCCCccccccccccccceeEEEeccc-CCCCCCCCHHHHHHHhhhhCCcEEEE
Q 013217 98 ANFEVYTAILKPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIA 175 (447)
Q Consensus 98 a~~~~~~al~~pgd~Vl-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~id~~~l~~~~~~~~~klii~ 175 (447)
++.++.+.++++||+++ +.. .|+++..+.. .+...| .++++...- ...+..+++++++ +.+ +.+.|.+
T Consensus 80 ~~ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~---ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~-d~~~v~~ 149 (364)
T PRK12462 80 QFSMIPMNFSRPGAAAPEYVT---TGYWSRKAIG---EASRVA-AMRVVWDGAASGYRTLPSLAELD--WDA-RAPFRHY 149 (364)
T ss_pred HHHHHHHHcCCCCCcEEEEEe---CCHHHHHHHH---HHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCC-CCcEEEE
Confidence 99999999999999765 333 3444333211 112223 222222100 0112356677652 222 4677777
Q ss_pred cCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchh
Q 013217 176 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 252 (447)
Q Consensus 176 ~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~ 252 (447)
++..+++ ..+ ++.+.+++++++|++...|..+ .+++..|++.++.+|+|+ |.| +++++++
T Consensus 150 t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~p-----id~~~~dvi~agsQKnlg-P~Gltvvivs~------ 212 (364)
T PRK12462 150 VSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRP-----FDVEAYGMVYAHAQKNLG-PAGVTVAIIRR------ 212 (364)
T ss_pred ccCCCCceEecC-----cccccCCCeEEEEcCchhhCCC-----CChHHccEEEeeccccCC-CCceEEEEECH------
Confidence 6433332 333 2333468999999986554332 223345999999999996 889 9888888
Q ss_pred hHHHHhhhcc-----------CCCCCCCCcHHHHHHHHHHHHHhcCh--hHHHHHHHHHHHHHHHHHHHHHCC-cEeee-
Q 013217 253 ELESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP--EFKVYQNKVVSNCRALASRLVELG-YKLVS- 317 (447)
Q Consensus 253 ~~~~~i~~~~-----------~~~~~g~p~~~~~aal~~al~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~- 317 (447)
+..++..... ...+..||+...+.++..+++.+.++ |.+.+.++..+.++.+++.+.+.. +....
T Consensus 213 ~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~ 292 (364)
T PRK12462 213 ALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHA 292 (364)
T ss_pred HHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 3443332210 11234588899999999999999877 889999999999999999998854 43322
Q ss_pred -CCCCCeeE-EecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 318 -GGSDNHLV-LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 318 -~~~~~~~~-~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+...+.+. .+.+.... ...++.+..+++|+.-- -|+.. -+++|+|.-. .|+.++++.|++++++.-
T Consensus 293 ~~~~RS~mnv~f~~~~~~-l~~~f~~~a~~~gl~~l----kGhr~---vgg~Ras~yn----a~~~e~v~~L~~fm~~f~ 360 (364)
T PRK12462 293 HRAARSTMNVAFRFRQPR-LDTLFKEQSTEAGFCGL----SGHRS---IGGIRASLYN----AVSEQAVSRLCAFLKDFA 360 (364)
T ss_pred ChhhcCcceEEEEcCCHH-HHHHHHHHHHHCCCccc----cCCcc---cCceEEEcCC----CCCHHHHHHHHHHHHHHH
Confidence 11223332 23433322 23456667778898763 23322 3579998643 356999999999988754
Q ss_pred H
Q 013217 396 E 396 (447)
Q Consensus 396 ~ 396 (447)
+
T Consensus 361 ~ 361 (364)
T PRK12462 361 I 361 (364)
T ss_pred H
Confidence 3
No 278
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=4.5e-16 Score=153.66 Aligned_cols=313 Identities=16% Similarity=0.131 Sum_probs=187.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 110 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~pg 110 (447)
.+|.|.+++.+.+.+... ....+. ..++....+++.+.++.+. .+.++||++|+.+++... .-+|
T Consensus 46 ~~p~v~~a~~~~~~~~~~---~~~~~~------~~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~g 111 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIWH---VSNLFT------NSLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHTG 111 (377)
T ss_pred CCHHHHHHHHHHHHhccc---cccccC------CHHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhcC
Confidence 479999999888765211 111111 2344334456666665432 244689999999988854 2344
Q ss_pred -CEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCC---CCCCHHHHHHHhhhhCCcEEEEcCCCCC-CC-
Q 013217 111 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASAYP-RD- 183 (447)
Q Consensus 111 -d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~id~~~l~~~~~~~~~klii~~~~~~~-~~- 183 (447)
++|++.+..+.|....+ +..++.. +.....+..++. ...|++++++.+.+ ++++|++.+.... +.
T Consensus 112 ~~~vi~~~~~~Hg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~ 183 (377)
T PRK02936 112 KSKIVTFEQSFHGRTFGT-------MSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVI 183 (377)
T ss_pred CCeEEEECCCcCCCcHHh-------hhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCc
Confidence 67888876654332111 1111110 000000000000 01278999998876 7888888743332 22
Q ss_pred ----CChHHHHHHHHHhCCEEEEehhhhccccccccCCC--CCC-cccEEEeCCCcccC-CCCCceEEeecCCcchhhHH
Q 013217 184 ----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 255 (447)
Q Consensus 184 ----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~~~~~~~ 255 (447)
..+++|.++|++||+++|+|++| .|+...+.... ... ..|++ +++|+++ |.++|+++.++ ++.
T Consensus 184 ~~~~~~l~~l~~l~~~~~~~lI~DEv~-~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~------~~~ 254 (377)
T PRK02936 184 PADPAFLQEVQTLCKKFGALLIIDEVQ-TGIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK------ELG 254 (377)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH------HHH
Confidence 23899999999999999999998 56543331100 011 24665 4679985 56789998887 677
Q ss_pred HHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeeeC-CCCCeeEEecCCCC
Q 013217 256 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG-GSDNHLVLVDLRPM 332 (447)
Q Consensus 256 ~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~v~~~~~ 332 (447)
+.+.........+ .+....++..++++.+.. .++.+++.++.+.+++.|++. ++..+.. .....++++++..
T Consensus 255 ~~~~~~~~~~t~~-~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~- 329 (377)
T PRK02936 255 TAFGPGSHGSTFG-GNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE- 329 (377)
T ss_pred hhccCCCCCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc-
Confidence 7765433222233 355555566667776532 234667777888888888762 3332221 0123566777653
Q ss_pred CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 333 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 333 ~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
+...+.+.|.++||.+.. . ..+.+|++++...+ +++++++++.|.+++
T Consensus 330 --~~~~~~~~l~~~gv~v~~----~-----g~~~lRi~p~~~~~----~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 330 --EVAPVIEQLREEGLLVLS----A-----GPNVIRLLPPLVVT----KEELDQAVYLLKKVL 377 (377)
T ss_pred --hHHHHHHHHHHCCeEEec----C-----CCCEEEEECCcccC----HHHHHHHHHHHHHhC
Confidence 256788889999999842 2 13589999877776 999999999997753
No 279
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.75 E-value=2e-16 Score=156.00 Aligned_cols=296 Identities=18% Similarity=0.213 Sum_probs=194.1
Q ss_pred HHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 148 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (447)
.+++.+++.||+++..+ + ++|| .||.++++++++|||.||+....|-++. | .+.++|..-....-.
T Consensus 74 eAqe~aA~~fgAd~tyF---v--vNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~-------glilaGa~Pvyl~p~ 140 (557)
T COG1982 74 EAQELAARVFGADHTYF---V--VNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-H-------GLILAGATPVYLEPS 140 (557)
T ss_pred HHHHHHHHHhCCCceEE---E--ECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-H-------HHHHcCCceEEecCC
Confidence 45678999999998643 1 5665 7999999999999999999888776653 2 234555422221111
Q ss_pred cCCC---CCCCCHHHHHHHhhhhC-C-cEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCC--
Q 013217 149 LDES---TGLVDYDMLEKTAILFR-P-KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-- 220 (447)
Q Consensus 149 ~~~~---~~~id~~~l~~~~~~~~-~-klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~-- 220 (447)
.++. -+.|+.+.+++.+.+++ - |++++..++|-+ +.|.++|.+.++..++|+.+|++|.+.....+..+...
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~ 220 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALN 220 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhh
Confidence 2221 14689999998776632 3 677777677665 88999999999999999999999876555444444322
Q ss_pred CcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHH----HH
Q 013217 221 KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY----QN 295 (447)
Q Consensus 221 ~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~----~~ 295 (447)
..+|+++-|+||.+++..- ++|.++++.. -..++++.+.....+++|+...+|++.+|-.+....| ++. ..
T Consensus 221 ~~~~~~tqS~HK~l~alSQaS~iHv~~~~~---~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G-~~l~~~~~~ 296 (557)
T COG1982 221 GGADFVTQSTHKLLAALSQASMIHVKDGRA---VNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAG-RELWQEVID 296 (557)
T ss_pred cCceEEEechhhhhhhhhhhHHHhhCCCcc---CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhh-HHHHHHHHH
Confidence 2589999999999987655 8888886210 2345566555445578899999999998655444333 344 45
Q ss_pred HHHHHHHHHHHHHHHC-CcEeeeCCC--------------------CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCC
Q 013217 296 KVVSNCRALASRLVEL-GYKLVSGGS--------------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS 354 (447)
Q Consensus 296 ~~~~~~~~l~~~L~~~-g~~~~~~~~--------------------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~ 354 (447)
...+.++.+++...+. ++.++.+.. |.--+++..+..|+++..+.++|+++||......
T Consensus 297 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~ 376 (557)
T COG1982 297 EAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETG 376 (557)
T ss_pred HHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecC
Confidence 5555566666666553 466554321 1111234444678999999999999999875431
Q ss_pred CCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 355 VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 355 ~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
+. .--+=+++.. |-...++++|.++...
T Consensus 377 ---d~----~~lll~~~~~----gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 377 ---DY----SNLLLFSPGI----GKWQTLVDRLLEFKRR 404 (557)
T ss_pred ---Cc----eeeEEeeecc----chHHHHHHHHHHHHHh
Confidence 10 0012222211 3346677777776653
No 280
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.74 E-value=6.7e-16 Score=165.17 Aligned_cols=274 Identities=16% Similarity=0.114 Sum_probs=179.4
Q ss_pred HHHHHHHHHcCCCCCccceeeecC-CcHHHHHHHHHHh-cCCC--CEEEEecCCCCcccCCCccccccccccccceeEEE
Q 013217 70 LCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 145 (447)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~v~~~-sGs~a~~~~~~al-~~pg--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 145 (447)
..+..+++++|++.. |+... ++|.+..++++++ ++++ |+|++.+..|++....... .....| ++++
T Consensus 125 ~~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t----~a~~~G--~ev~ 194 (954)
T PRK05367 125 NFQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRT----RAEPLG--IEVV 194 (954)
T ss_pred HHHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHH----HHHhCC--CEEE
Confidence 456789999999974 33334 4446666677776 5554 9999999888876532210 012233 4555
Q ss_pred ecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cc
Q 013217 146 PYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 223 (447)
Q Consensus 146 ~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~ 223 (447)
.++.+. |.+ .+ ++..+++..|++.+ ..|+++|+++||++|+++++|+.+.+..+.. .|-. ++
T Consensus 195 ~~~~~~-----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~----~pge~Ga 258 (954)
T PRK05367 195 VGDAAK-----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLT----PPGEMGA 258 (954)
T ss_pred EecCcc-----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCC----ChhhcCC
Confidence 544431 111 12 45556665666665 7799999999999999999999874443322 2222 69
Q ss_pred cEEEeCCCcc-----cCCCCCceEEeecCCcchhhHHHHhhhccC---------C--------------CCCCCCcHHH-
Q 013217 224 DVVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNAVF---------P--------------GLQGGPHNHT- 274 (447)
Q Consensus 224 Di~~~s~~K~-----l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~---------~--------------~~~g~p~~~~- 274 (447)
||+++++||| ++||..|++++++ ++...+..... + ...++.|...
T Consensus 259 Di~vgs~qkfg~P~g~GGP~aGflavr~------~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~ 332 (954)
T PRK05367 259 DIAVGSAQRFGVPMGFGGPHAAYFAVRD------AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTA 332 (954)
T ss_pred CEEEeeCcccCCCCCCCCCCEEEEEECH------HHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchH
Confidence 9999999999 6778559999998 44433321000 0 0123433321
Q ss_pred --HHHHHHH--HHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEE
Q 013217 275 --IGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 350 (447)
Q Consensus 275 --~aal~~a--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v 350 (447)
+.++.++ +..+...|.++..+++..++.++++.|.+.|+++..+. .-..+.+.+. .+..++.+.|.++||.+
T Consensus 333 qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~-~f~~~~~~~~---~~~~~i~~~l~~~gi~~ 408 (954)
T PRK05367 333 QVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDS-FFDTLTVEVG---GDAAAVLARALAAGINL 408 (954)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCC-CCCeEEEeCC---CCHHHHHHHHHHCCcee
Confidence 2222222 23445567888899999999999999988898876432 1122334432 36788999999999998
Q ss_pred ccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 351 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 351 ~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
+.. ..+.+|++++.++| ++|++++++++.
T Consensus 409 ~~~---------~~~~l~is~~e~~t----~~did~l~~~l~ 437 (954)
T PRK05367 409 RRV---------DDDHVGISLDETTT----REDLAALLAVFG 437 (954)
T ss_pred ccc---------cCCEEEEEecccCC----HHHHHHHHHHHc
Confidence 432 13479999999999 999999999996
No 281
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.74 E-value=1.9e-15 Score=150.31 Aligned_cols=313 Identities=15% Similarity=0.123 Sum_probs=183.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCC--
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-- 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pg-- 110 (447)
.|.+.+++.+.+... . +....| . .+...+ ..+++++++|.+. .+..+||++|+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~-~--~~~~~~-~-~~~~~~----la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKL-I--HTSNLY-Y-IEPQEE----LAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhc-c--cccccc-C-CHHHHH----HHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 488999988776542 1 111111 1 222233 3367777777643 2445777899999988765433
Q ss_pred -----CEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCCC----CCCHHHHHHHhhhhCCcEEEEcCCCC
Q 013217 111 -----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTG----LVDYDMLEKTAILFRPKLIIAGASAY 180 (447)
Q Consensus 111 -----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~----~id~~~l~~~~~~~~~klii~~~~~~ 180 (447)
++|++..+.+.|.... .+...+.. +.....++. .+. ..|++++++++.+ ++++|++.++++
T Consensus 123 ~~~~~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~ 193 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRTLA-------TLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQG 193 (396)
T ss_pred cCCCCCeEEEECCCcCcccHH-------HHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEecccC
Confidence 6788887765443110 01111110 000000111 111 2389999999965 899999975544
Q ss_pred CC---CC---ChHHHHHHHHHhCCEEEEehhhhccccccccC-CC-CCC-cccEEEeCCCcccC-CCCCceEEeecCCcc
Q 013217 181 PR---DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVL 250 (447)
Q Consensus 181 ~~---~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~-~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~~ 250 (447)
++ .. .+++|.++|+++|+++|+|+++. |+...+.. .. ... ..|+++ ++|.++ |.|.|++++++
T Consensus 194 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~---- 266 (396)
T PRK02627 194 EGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKE---- 266 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEE--EcchhhCCcccEEEEEcH----
Confidence 43 11 37899999999999999999974 55333311 10 011 246665 569985 56779999887
Q ss_pred hhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC--cEeeeC-CCCCeeEEe
Q 013217 251 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSG-GSDNHLVLV 327 (447)
Q Consensus 251 ~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~-~~~~~~~~v 327 (447)
++.+.+.........+ .+....++...+++.+... ++.+++.++.+.+.+.|.+.. +..+.. .....++++
T Consensus 267 --~~~~~~~~~~~~~t~~-~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i 340 (396)
T PRK02627 267 --KVADVFTPGDHGSTFG-GNPLACAAALAVIEIIEEE---GLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGI 340 (396)
T ss_pred --HHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEE
Confidence 6777665432222223 3444455555566655432 345666666777777665521 211111 012344566
Q ss_pred cCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 328 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+. .+..++.+.|.+.||.+... . ...+|++++...+ +++++++.+.|.+++..
T Consensus 341 ~~~---~~~~~~~~~l~~~Gv~v~~~----~-----~~~lRi~~~~~~~----~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 341 ELD---RPAAEIVKKALEKGLLINVT----G-----DNVLRLLPPLIIS----KEEIDEAVDRLEEVLKE 394 (396)
T ss_pred Eec---CcHHHHHHHHHHCCeEEeec----C-----CCEEEEECCcccC----HHHHHHHHHHHHHHHHh
Confidence 652 24677888887889998532 1 3479999876666 99999999999888753
No 282
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.74 E-value=4.3e-15 Score=147.79 Aligned_cols=310 Identities=13% Similarity=0.087 Sum_probs=185.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
..|+|.+++.+.+.+ +..+.+ . + ..+...+++ +++++++|.+. .+.++||++||..++....
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~~~--~-~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLSSR--A-F-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-cccccc--c-c-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 379999999887654 222221 1 1 122233444 57788888643 3446999999999888742
Q ss_pred -----CC-CCEEEEecCCCCcccCCCccccccccccccce----------eEEEecccCCCCCCCCHHHHHHHhhhh--C
Q 013217 108 -----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILF--R 169 (447)
Q Consensus 108 -----~p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~id~~~l~~~~~~~--~ 169 (447)
.+ .++|+.....|.|...- .+..++.. ..++.++ ..|+++++++++.. +
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTLG-------AISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccHH-------HHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 13 45677776664432100 11111100 0111111 23789999988642 3
Q ss_pred CcEEEEcCCCCC-C-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccCC-CC-CC-cccEEEeCCCcccCC--CC
Q 013217 170 PKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLRG--PR 238 (447)
Q Consensus 170 ~klii~~~~~~~-~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~-~~-~~-~~Di~~~s~~K~l~G--p~ 238 (447)
..+|++.+...+ + ..+ +++|.++|++||+++++|++| .|+...+... .. .. ..|++++| |.++| .+
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEee--ccccCCCCC
Confidence 456666533222 2 333 899999999999999999998 5654333210 00 11 25777765 99864 45
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeee-
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS- 317 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~- 317 (447)
.|+++.++ ++.+.+.......+.++ +....++..++++.+.+++ +.++..+..+++.+.|++.+..++.
T Consensus 264 ig~v~~~~------~i~~~~~~~~~~~t~~~-~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~~~~~~~ 333 (401)
T TIGR01885 264 VSAVLADD------DVMLTIKPGEHGSTYGG-NPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLPKPIITE 333 (401)
T ss_pred cEEEEEcH------HHHhhccCCCCCCCCCC-CHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhccCCceeE
Confidence 67888877 67776654333333333 3444555556777765433 3456677788899999886544332
Q ss_pred -CCCCCeeEEecCCCC--CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 318 -GGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 318 -~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
.+. ..+..+.+... +.+..++.+.|.++||.+.. . .+..+|++++..++ ++|++++++.|.++
T Consensus 334 ~~g~-g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~----~-----~~~~lRi~p~l~~t----~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 334 VRGR-GLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKP----T-----HGNIIRLAPPLVIT----EEQLDEGLEIIKKV 399 (401)
T ss_pred Eeec-CeeEEEEeccCcchhHHHHHHHHHHhCCEEEEe----c-----CCCEEEEeCCccCC----HHHHHHHHHHHHHH
Confidence 122 22223333222 12456788888899999843 1 23589999886666 99999999999876
Q ss_pred H
Q 013217 395 V 395 (447)
Q Consensus 395 l 395 (447)
+
T Consensus 400 l 400 (401)
T TIGR01885 400 I 400 (401)
T ss_pred h
Confidence 5
No 283
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.73 E-value=6.1e-15 Score=146.25 Aligned_cols=311 Identities=15% Similarity=0.103 Sum_probs=186.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++.+.+.+-+..+ ..+ ..+...+++ ++++++++.+. ....+||++||..++....
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIG---NGY--TNEPVLRLA----KKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhccccc---Ccc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 47999999988776522111 111 122233343 57777776543 2446899999999888651
Q ss_pred ----CCCCEEEEecCCC-CcccCCCccccccccccccce-----e-----EEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 013217 108 ----KPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKL 172 (447)
Q Consensus 108 ----~pgd~Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~id~~~l~~~~~~~~~kl 172 (447)
...++|+..+-.| |.+.. .+...+.. + .+..++ ..|++++++++.+ ++++
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~aa 182 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTLF--------TVSVGGQPKYSQGFAPLPGGIKHAP------YNDLAAAKALISD-KTCA 182 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccHH--------HHHhcCCcccccCCCCCCCceEEeC------CCCHHHHHHHhcc-CeEE
Confidence 1235677766443 33210 11111110 0 111111 2489999999876 7888
Q ss_pred EEEcCCCCC-CC-----CChHHHHHHHHHhCCEEEEehhhhccccccccCCC--CCC-cccEEEeCCCccc-CCCCCceE
Q 013217 173 IIAGASAYP-RD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMI 242 (447)
Q Consensus 173 ii~~~~~~~-~~-----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~~~-~~Di~~~s~~K~l-~Gp~gG~i 242 (447)
|++.+.+.. +. ..+++|+++|++||+++|+|++| .|+...+.... .+. ..|+++ +.|.+ +|.+.|++
T Consensus 183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~t--~~K~lggG~pigav 259 (397)
T TIGR03246 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDILT--SAKALGGGFPIGAM 259 (397)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEEE--eehhhhCCcceeEE
Confidence 888843322 22 23789999999999999999998 66633332110 111 257775 56998 46666888
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC--cEeeeCCC
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSGGS 320 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~ 320 (447)
++++ ++.+.+.......+.+ .++...++..++++.+.. .+..+++.++.++|.+.|++.+ +.++....
T Consensus 260 ~~~~------~i~~~~~~~~~~~t~~-~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vr 329 (397)
T TIGR03246 260 LTTT------EIAAHLKVGTHGTTYG-GNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIR 329 (397)
T ss_pred EEcH------HHHHhccCCCcCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeee
Confidence 8887 6777665432222233 344445555556766543 2457778888888988887743 22222101
Q ss_pred -CCeeEEecCCCC-CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 321 -DNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 321 -~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
...++.+.+.+. ......+.+.|.++||.+... .++.+|++++..++ ++|++++++.|.+++..
T Consensus 330 g~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~~lR~~p~~~~t----~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 330 GKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA---------GPNVVRFAPSLVIS----DDDIDEGLARFERAIEQ 395 (397)
T ss_pred cCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 122222333221 113456778888899998431 13589999887777 99999999999888763
No 284
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=8.4e-15 Score=138.67 Aligned_cols=318 Identities=20% Similarity=0.205 Sum_probs=195.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC-CCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g-~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
..|.+.+++...+..-+ ..+.-|+. +..++. .+++.++.+ .+. .+.++||++||.+++....
T Consensus 59 ~hP~iv~al~~Q~~kl~---h~sn~~~~-----~~~~~l-a~~L~~~s~~~d~-----vff~NSGaEA~EaAiKlARk~~ 124 (404)
T COG4992 59 CHPALVEALKEQAEKLW---HVSNLFYN-----EPQAEL-AEKLVELSPFADR-----VFFCNSGAEANEAALKLARKYT 124 (404)
T ss_pred CCHHHHHHHHHHHHHhh---hcccccCC-----hHHHHH-HHHHHhhCccccE-----EEEcCCcHHHHHHHHHHHHHHc
Confidence 37999999888665533 12222221 122222 356777776 332 3456999999999887542
Q ss_pred C-C-CCEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCC---CCCCHHHHHHHhhhhCCcEEEEcCC-CC
Q 013217 108 K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGAS-AY 180 (447)
Q Consensus 108 ~-p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~id~~~l~~~~~~~~~klii~~~~-~~ 180 (447)
. | .-+|+...-.+.|.-. + .+++.+.. +.--..|+-+.- -.-|++++++++++ +|.+|++.+- .-
T Consensus 125 ~~~~k~~Iia~~nsFHGRT~-g------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGE 196 (404)
T COG4992 125 GDPEKSKIIAFENSFHGRTL-G------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGE 196 (404)
T ss_pred CCCCCcEEEEEcCCcCCccc-e------eeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCC
Confidence 2 2 2378877766544311 1 22333321 111111122111 13589999999998 8999998732 22
Q ss_pred CCCC--C---hHHHHHHHHHhCCEEEEehhhhccccccccC-CCC-CC-cccEEEeCCCcccCC-CCCceEEeecCCcch
Q 013217 181 PRDF--D---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLG 251 (447)
Q Consensus 181 ~~~~--~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~~-~~-~~Di~~~s~~K~l~G-p~gG~i~~~~~~~~~ 251 (447)
+++. + +++++++|++||+++|.|++| .|+--.|.. ..- .. ..||++.. |.|+| .+.|.++.++
T Consensus 197 gGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQ-tG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG~PigA~la~~----- 268 (404)
T COG4992 197 GGVIPAPPEFLKALRELCDEHGALLILDEVQ-TGLGRTGKLFAYEHYGVEPDILTLA--KALGGGFPIGAMLATE----- 268 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCeEEEEeccc-cCCCccchHHHHHHhCCCCCEEEee--ccccCCccceeeEEch-----
Confidence 2322 1 589999999999999999999 565433321 100 00 25898877 99954 4447776665
Q ss_pred hhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeeeCCCCCeeE-Eec
Q 013217 252 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSDNHLV-LVD 328 (447)
Q Consensus 252 ~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~-~v~ 328 (447)
.+.+.+.......+.|+ |+..+++..++++.+.++++ .++..+...+|.+.|++. .+.++..-...-++ =+.
T Consensus 269 -~~~~~~~~G~HgSTfGG-NpLacAv~~a~l~~l~~e~l---l~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGie 343 (404)
T COG4992 269 -EIASAFTPGDHGSTFGG-NPLACAVALAVLEVLLEEGL---LENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIE 343 (404)
T ss_pred -hhhhcCCCCcccCCCCc-CHHHHHHHHHHHHHHcchhH---HHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEE
Confidence 56665555444334443 55666666668888876665 666777788888888773 33333321111222 234
Q ss_pred CCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 329 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 329 ~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+.... ...++.+.|.+.|+.+... .+..||+.++...+ ++|+++..+.+.+++...
T Consensus 344 l~~~~-~a~~~~~~~~~~gvL~~~a---------~~~ViR~~PpL~i~----~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 344 LKEPY-RARDIVRALREEGVLVLPA---------GPNVIRFLPPLVIT----EEEIDEALDALERALAAA 399 (404)
T ss_pred ecCcc-cHHHHHHHHHHCCeEEecC---------CCCeEEecCCccCC----HHHHHHHHHHHHHHHHHh
Confidence 43321 3678999999999998532 23489999887777 999999999999998854
No 285
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.71 E-value=9e-15 Score=145.55 Aligned_cols=310 Identities=15% Similarity=0.113 Sum_probs=185.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++...+.+.... +. ....+...+++ ++++++++.+. ....+||++||.+++....
T Consensus 57 ~~p~v~~a~~~~~~~~~~~---~~--~~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 57 CHPALVKALKEQGEKLWHI---SN--VFTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred CCHHHHHHHHHHHHhcCcc---cC--ccCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHh
Confidence 4899999998877642111 11 11122222333 56777776543 2445999999999887541
Q ss_pred ----CCCCEEEEecCCC-CcccCCCccccccccccccc-----ee-----EEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 013217 108 ----KPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSI-----YF-----ESMPYRLDESTGLVDYDMLEKTAILFRPKL 172 (447)
Q Consensus 108 ----~pgd~Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~-----~~-----~~~~~~~~~~~~~id~~~l~~~~~~~~~kl 172 (447)
...++|+..+-.+ |.+.. .+.+.+. .+ .++.++ ..|++++++.+.+ ++++
T Consensus 123 ~~~~~~~~~ii~~~~~~HG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~aa 187 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSFHGRTLF--------TVSVGGQPKYSDGFGPKPADITHVP------FNDLAAVKAVIDD-HTCA 187 (403)
T ss_pred hcCCCCCCeEEEEcCCcCCchhh--------hHhhcCChhhhhcCCCCCCCcEEeC------CCCHHHHHHHhcC-CeEE
Confidence 1235677766543 33221 0011110 00 111111 2388999998875 7889
Q ss_pred EEEcCCCCC-CCC--C---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC---C-cccEEEeCCCccc-CCCCCce
Q 013217 173 IIAGASAYP-RDF--D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGGM 241 (447)
Q Consensus 173 ii~~~~~~~-~~~--~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~---~-~~Di~~~s~~K~l-~Gp~gG~ 241 (447)
|++.+.+.. +.. + +++|.++|++||+++|+|++|. |+...+.. .+. . ..|+. |++|++ +|.|.|+
T Consensus 188 iiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~-~~~~~~~~~pdi~--s~sK~l~~G~rig~ 263 (403)
T PRK05093 188 VVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDL-FAYMHYGVTPDIL--TSAKALGGGFPIGA 263 (403)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccc-hhhhhcCCCCCEE--EecccccCCcceEE
Confidence 888843322 222 2 7899999999999999999975 65444421 111 1 24655 567998 4677899
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCc--EeeeCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLVSGG 319 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~--~~~~~~ 319 (447)
++.++ ++.+.+.........++ +....++...+++.+..+ ++.+++.++.+.+.+.|++.+. .+....
T Consensus 264 vv~~~------~i~~~l~~~~~~~t~~~-~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 333 (403)
T PRK05093 264 MLTTA------EIASHFKVGTHGSTYGG-NPLACAVAEAVFDIINTP---EVLEGVKARRQRFVDGLQKINQKYGVFSEI 333 (403)
T ss_pred EEEcH------HHHhhcCCCCCCCCCCC-CHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeEeE
Confidence 99988 77777754333233333 344444445567665432 3457778888889988887432 111110
Q ss_pred -CCCeeEEecCCCCC-CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 320 -SDNHLVLVDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 320 -~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
....++++.+.+.. .+..++...|.+.||.+.. . ..+.+|++++..++ +++++++.+.|.+++..
T Consensus 334 ~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~----~-----g~~~lRl~~~~~~~----~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 334 RGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLV----A-----GPDVLRFAPSLVIE----EADIDEGLARFEKAVAK 400 (403)
T ss_pred eeCceEEEEEecCcchhHHHHHHHHHHHCCeEEec----C-----CCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 11344556554321 1345677778888999852 1 13589998877666 99999999999988753
No 286
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.71 E-value=2.3e-16 Score=137.15 Aligned_cols=163 Identities=25% Similarity=0.290 Sum_probs=114.0
Q ss_pred HHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccC
Q 013217 71 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 150 (447)
Q Consensus 71 ~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (447)
++++++++|+.+.+. +.+ .++|+.|+..++.++.++|++|++.++.|+++.. . .....|. +++.++.+
T Consensus 5 ~~~~l~~~~~~~~~~--~~~-~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~--~~~~v~~~ 72 (170)
T cd01494 5 LEEKLARLLQPGNDK--AVF-VPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGA--KPVPVPVD 72 (170)
T ss_pred HHHHHHHHcCCCCCc--EEE-eCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCC--EEEEeccC
Confidence 346899999644332 233 3577899999999999999999999998887752 0 1233444 45555554
Q ss_pred CCCC-CCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEE
Q 013217 151 ESTG-LVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 227 (447)
Q Consensus 151 ~~~~-~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~ 227 (447)
..+. ..|.+.+++.....+|++++++.+++++ ..|+++|.++|+++|+++++|++|..+.........+..++|+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 3222 2333356555544488999888666554 668899999999999999999998766554321112223689999
Q ss_pred eCCCcccCCCCCceEEee
Q 013217 228 TTTHKSLRGPRGGMIFFK 245 (447)
Q Consensus 228 ~s~~K~l~Gp~gG~i~~~ 245 (447)
.|+||+|++|++|+++++
T Consensus 153 ~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 153 FSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEcccccCCCceEEEEeC
Confidence 999999988877999875
No 287
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.71 E-value=6.4e-15 Score=137.28 Aligned_cols=281 Identities=17% Similarity=0.182 Sum_probs=178.9
Q ss_pred eecCCc-HHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCC-CCCCCCHHHHHHHhhh
Q 013217 90 VQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 167 (447)
Q Consensus 90 v~~~sG-s~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~~~~ 167 (447)
+.++.| |.||.++...|..|||.-|++.|.|+|.-. .+++.. +++++|+.++. ++++++.+++|++..+
T Consensus 149 ~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr--------dl~~rT-gveivpv~c~Ss~~f~itv~alE~A~~~ 219 (471)
T KOG0256|consen 149 VVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR--------DLRWRT-GVEIVPVHCSSSNGFQITVEALEAALNQ 219 (471)
T ss_pred eEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc--------cceecc-CceEEEEEeecCCCccccHHHHHHHHHH
Confidence 334555 499999999999999999999999888632 222222 35777877765 4579999999987753
Q ss_pred -----hCCcEEEEcCCCCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCC----------CcccEEE
Q 013217 168 -----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----------KYCDVVT 227 (447)
Q Consensus 168 -----~~~klii~~~~~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~----------~~~Di~~ 227 (447)
.+.|.|++..|+||. ..+ +..+..+|.++++.+|+|+.+ +|-++......++ +..--++
T Consensus 220 A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIy-a~sVF~~~~F~Sv~ev~~~~~~~~~rvHiv 298 (471)
T KOG0256|consen 220 ARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIY-AGSVFDKSEFRSVLEVRKDPHLDPDRVHIV 298 (471)
T ss_pred HHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhh-cccccCccCceEHHHHhhccccCCCcEEEE
Confidence 256888888777774 444 456667788999999999995 5655443211111 0112467
Q ss_pred eCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 013217 228 TTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 305 (447)
Q Consensus 228 ~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~ 305 (447)
.|++|-| +|.|-|.|+..++ +......+...-+..++...+.++++- +=+...+.-..+..+|+..+-+++.
T Consensus 299 yslSKD~GlpGfRvGviYS~ne-----~VvsaA~kmssf~~vSs~tQ~~la~LL-SD~~f~~~yl~en~~Rl~~rh~~~~ 372 (471)
T KOG0256|consen 299 YSLSKDFGLPGFRVGVIYSNNE-----DVVSAATKMSSFGLVSSQTQYLLASLL-SDEEFTREYLRENNKRLRIRHRYIV 372 (471)
T ss_pred EEeccccCCCceEEEEEEecCh-----HHHHHHHHHhhccCCcHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899975 5777799999886 666665554322222111112222221 2222222222566677788888899
Q ss_pred HHHHHCCcEeeeCCCCCeeEEecCCCC--CCC--H-HH-HHHHHhhcCeEEccCCCCCCC-CCCCCCeEEEecCccccCC
Q 013217 306 SRLVELGYKLVSGGSDNHLVLVDLRPM--GID--G-AR-VEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRG 378 (447)
Q Consensus 306 ~~L~~~g~~~~~~~~~~~~~~v~~~~~--~~~--~-~~-~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~~~~g 378 (447)
+.|++.|++++..+ ..-+.|+|++.. ..+ + .+ +.+.+.+.++.+++ |.. .-..++.+|+++..
T Consensus 373 ~gLk~lgI~cl~s~-AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSp----G~s~~C~EpGWFRvcFAn----- 442 (471)
T KOG0256|consen 373 EGLKALGIPCLKSN-AGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSP----GSSCHCHEPGWFRVCFAN----- 442 (471)
T ss_pred hhHHhcCCceeecC-CeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCC----CCcceecCCCeEEEEecc-----
Confidence 99999999998753 356678998652 111 1 12 33445556887754 433 22357899999754
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 013217 379 FSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 379 ~~~~di~~l~~~i~~~l~ 396 (447)
|.++.++...+.|+..+.
T Consensus 443 ~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 443 MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 336666666777766665
No 288
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.71 E-value=3.4e-15 Score=145.70 Aligned_cols=241 Identities=20% Similarity=0.149 Sum_probs=156.2
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCcc----ceeeecCCcHHHHHHHHHHhcC--------C-----CC-EEEEecCCCCc
Q 013217 61 NEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------P-----HD-RIMGLDLPHGG 122 (447)
Q Consensus 61 ~~~~~~le~~~~~~~~~~~g~~~~~~----~~~v~~~sGs~a~~~~~~al~~--------p-----gd-~Vl~~~~~~~~ 122 (447)
.+...++|..+..++++++|.+.+.. ..-+.+++||++|+.++.+..+ . +. .|++.+-.|.+
T Consensus 74 ~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S 153 (373)
T PF00282_consen 74 SPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS 153 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH
T ss_pred ccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH
Confidence 45678899999999999999983211 1234456677898877655421 1 23 34444333332
Q ss_pred ccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--C---CcEEEEc-CCCCCC-CCChHHHHHHHHH
Q 013217 123 HLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKLIIAG-ASAYPR-DFDYPRMRQIADA 195 (447)
Q Consensus 123 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~---~klii~~-~~~~~~-~~~~~~i~~ia~~ 195 (447)
. .+.+.+.|.+ ++.++++ +++.+|+++|++++.+. + |-+|+.+ ++.+.+ ..|+++|.++|++
T Consensus 154 ~--------~Kaa~~lGlg--~~~I~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~ 222 (373)
T PF00282_consen 154 I--------EKAARILGLG--VRKIPTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEK 222 (373)
T ss_dssp H--------HHHHHHTTSE--EEEE-BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHH
T ss_pred H--------HHhcceeeeE--EEEecCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccc
Confidence 2 2456677876 4455576 46899999999988653 2 3345544 333333 7899999999999
Q ss_pred hCCEEEEehhhhccccccccC-C--CCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHH-Hhhh-c--c-----
Q 013217 196 VGALLMMDMAHISGLVAASVV-A--DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES-AINN-A--V----- 262 (447)
Q Consensus 196 ~g~~livD~a~~~g~~~~~~~-~--~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~-~i~~-~--~----- 262 (447)
+++|++||+|+.......... + ..++.+|.++.++|||+..|.+ |+++++++ .... .... . .
T Consensus 223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~-----~~l~~~~~~~~~Yl~~~~~ 297 (373)
T PF00282_consen 223 YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDK-----SDLRDAFSINADYLGNDDR 297 (373)
T ss_dssp CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSG-----GGHHGGGEEEETCTT-S-S
T ss_pred cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecc-----cchHHHhccChhhhccccc
Confidence 999999999964323322221 1 2234799999999999999988 99999885 2222 1100 0 0
Q ss_pred ---------CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeC
Q 013217 263 ---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG 318 (447)
Q Consensus 263 ---------~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~ 318 (447)
..+.+++- -.....++..++....+++.+++++..+.+++|++.|++ .+++++.+
T Consensus 298 ~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~ 362 (373)
T PF00282_consen 298 ESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE 362 (373)
T ss_dssp SS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred ccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 01123343 344567788888888889999999999999999999998 45888764
No 289
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.2e-15 Score=140.74 Aligned_cols=184 Identities=19% Similarity=0.149 Sum_probs=131.2
Q ss_pred eeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHH
Q 013217 23 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 102 (447)
Q Consensus 23 i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~ 102 (447)
..+..+..|.-....++... +.-+ ..||...|. .++..+.+| +|++.+=|--. -+.+.||..|...+
T Consensus 27 ~PIyqtTsy~F~d~~haa~l-F~l~-~~G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~a 93 (426)
T COG2873 27 VPIYQTTSYVFDDTDHAAAL-FGLK-EPGNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYA 93 (426)
T ss_pred cceeeeeeeecCCHHHHHHH-hCCC-cCCceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHH
Confidence 44455555554333333322 2222 246666654 577889998 57777766443 24458999999999
Q ss_pred HHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC
Q 013217 103 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 182 (447)
Q Consensus 103 ~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~ 182 (447)
+..+.++||+|+..+--|||.++.-. ..++..| +++.. +| ..|++.+++++++ +||+|++..-.||.
T Consensus 94 i~~la~aGD~iVss~~LYGGT~~lf~----~tl~~~G--i~v~f--vd----~~d~~~~~~aI~~-nTkavf~EtigNP~ 160 (426)
T COG2873 94 ILNLAGAGDNIVSSSKLYGGTYNLFS----HTLKRLG--IEVRF--VD----PDDPENFEAAIDE-NTKAVFAETIGNPG 160 (426)
T ss_pred HHHhccCCCeeEeeccccCchHHHHH----HHHHhcC--cEEEE--eC----CCCHHHHHHHhCc-ccceEEEEeccCCC
Confidence 99999999999999988988753110 1122334 34445 32 2479999999998 99999998777886
Q ss_pred --CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCCcccCCC
Q 013217 183 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP 237 (447)
Q Consensus 183 --~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~Gp 237 (447)
..|+++|.++||++|++++||.+-..+ ....|++ ++|+++.|++||++|-
T Consensus 161 ~~v~Die~ia~iAh~~gvpliVDNT~atp-----yl~rP~~hGADIVvHS~TK~igGh 213 (426)
T COG2873 161 LDVLDIEAIAEIAHRHGVPLIVDNTFATP-----YLCRPIEHGADIVVHSATKYIGGH 213 (426)
T ss_pred ccccCHHHHHHHHHHcCCcEEEecCCCcc-----eecchhhcCCCEEEEeecccccCC
Confidence 789999999999999999999984332 3345666 6999999999999764
No 290
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.69 E-value=1.7e-14 Score=143.45 Aligned_cols=318 Identities=18% Similarity=0.131 Sum_probs=188.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+|+.+.+.+-+.. +..+. .+...++ .++++++++.+. ...++||++|+..++....
T Consensus 56 ~~p~v~~A~~~~~~~~~~~---~~~~~--~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 56 AHPALREALNEQASKFWHT---GNGYT--NEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred CCHHHHHHHHHHHhhcccc---cCccC--CHHHHHH----HHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHh
Confidence 3789999988877542111 11111 1112223 357777776542 2446899999999887642
Q ss_pred ----CCCCEEEEecCCCCcccCCCccccccccccccce-eE--EEecccC-CCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 013217 108 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FE--SMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASA 179 (447)
Q Consensus 108 ----~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~-~~~~~id~~~l~~~~~~~~~klii~~~~~ 179 (447)
.+..+|+..+..|.|... + .+.+.+.. +. ..++.-+ ......|++++++.+.+ ++++|++. |.
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv 192 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTL-F------TVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PI 192 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcch-h------HHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CC
Confidence 245788888766544321 0 11112210 00 0000000 00113588999998876 78888886 34
Q ss_pred CCC--C-----CChHHHHHHHHHhCCEEEEehhhhccccccccCCC--CCC-cccEEEeCCCccc-CCCCCceEEeecCC
Q 013217 180 YPR--D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 248 (447)
Q Consensus 180 ~~~--~-----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~~~-~~Di~~~s~~K~l-~Gp~gG~i~~~~~~ 248 (447)
++. . ..+++|.++|++||+++|+|++| .|+...+.... ... ..|++ +++|.+ +|.+.|++++++
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~-- 267 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTE-- 267 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcH--
Confidence 432 2 24689999999999999999998 66543332110 011 24665 566998 566778888887
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC--cEeeeCCC-CCeeE
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSGGS-DNHLV 325 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~-~~~~~ 325 (447)
++.+.+.......+.+ .+....++..++++.+..+ +..+++.++.+++.+.|++.+ +.++.... ...++
T Consensus 268 ----~~~~~~~~~~~~~t~~-~~pl~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~ 339 (406)
T PRK12381 268 ----KCASVMTVGTHGTTYG-GNPLASAVAGKVLELINTP---EMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLI 339 (406)
T ss_pred ----HHHhhcCCCCCCCCCC-CCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEE
Confidence 7777765533332232 3444455555566665432 356777788888888887743 22222111 12334
Q ss_pred EecCCCCC-CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 326 LVDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 326 ~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
++.+.+.. .....+.+.|.++||.+... .+..+|++++...+ ++|++++.+.|.+++...
T Consensus 340 ~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---------g~~~lRl~p~~~~t----~~~i~~~~~~l~~~l~~~ 400 (406)
T PRK12381 340 GCVLNAEYAGKAKQISQEAAKAGVMVLIA---------GPNVVRFAPALNIS----EEEITTGLDRFARACERF 400 (406)
T ss_pred EEEecCchhhHHHHHHHHHHHCCcEEeeC---------CCCEEEEeCCccCC----HHHHHHHHHHHHHHHHHH
Confidence 45443211 12456778888999998421 13489999887677 999999999999988643
No 291
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=5.4e-17 Score=152.26 Aligned_cols=252 Identities=21% Similarity=0.228 Sum_probs=159.1
Q ss_pred cCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh
Q 013217 27 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 106 (447)
Q Consensus 27 ~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al 106 (447)
.|.| .+|+++++|..... |.. -|++.++...+| ++++++||.+.. +.+.|||.||..+++++
T Consensus 3 ~SD~-~~~~m~~a~~~a~~-----gd~---~Yg~D~~~~~l~----~~i~~l~g~e~a-----~f~~sGT~An~~al~~~ 64 (290)
T PF01212_consen 3 RSDT-PTPAMLEAMAAANV-----GDD---AYGEDPTTARLE----ERIAELFGKEAA-----LFVPSGTMANQLALRAH 64 (290)
T ss_dssp S-SS-S-HHEEHHHHHTTS-----B-C---CTTSSHHHHHHH----HHHHHHHTSSEE-----EEESSHHHHHHHHHHHH
T ss_pred CccC-CCHHHHHHHHcccc-----CCc---ccCCChhHHHHH----HHHHHHcCCCEE-----EEeCCCChHHHHHHHHH
Confidence 3666 78999999954322 222 267778888888 688899999853 34589999999999999
Q ss_pred cCCCCEEEEecCCCCcccCCCcccccccc-ccccceeEEEecccCCCCCCCCHHHHHHHhhh-----hCCcEEEEcCCCC
Q 013217 107 LKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----FRPKLIIAGASAY 180 (447)
Q Consensus 107 ~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~-----~~~klii~~~~~~ 180 (447)
++|++.|++....|--....+ .+ .+.|. ++++++.+ +++.+|+++|++.+.. .+|++|.++.+++
T Consensus 65 ~~~~~~vi~~~~aHi~~~E~g------a~~~~~G~--~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~ 135 (290)
T PF01212_consen 65 LRPGESVICADTAHIHFDETG------AIEELSGA--KLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTE 135 (290)
T ss_dssp HHTTEEEEEETTEHHHHSSTT------HHHHHTTC--EEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBT
T ss_pred HhcCCceeccccceeeeeccc------hhhHhcCc--EEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCc
Confidence 999999998876432221211 22 34554 66665543 2389999999999977 3578999986666
Q ss_pred C--C-CC---ChHHHHHHHHHhCCEEEEehhhhcccc-ccccCCC-CCCcccEEEeCCCcccCCCCCceEEeecCCcchh
Q 013217 181 P--R-DF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVAD-PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 252 (447)
Q Consensus 181 ~--~-~~---~~~~i~~ia~~~g~~livD~a~~~g~~-~~~~~~~-~~~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~ 252 (447)
. + .. ++++|.++|+++|++++.|+|...... ..+.... -..++|++++|++|.++.|-|++++.++
T Consensus 136 ~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~------ 209 (290)
T PF01212_consen 136 LAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNK------ 209 (290)
T ss_dssp TTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESH------
T ss_pred CCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEech------
Confidence 4 3 44 467888899999999999998532211 1111110 0136999999999999889899999998
Q ss_pred hHHHHhhhc--cCCC-C-CCCCcHHHHHH----HHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeee
Q 013217 253 ELESAINNA--VFPG-L-QGGPHNHTIGG----LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 317 (447)
Q Consensus 253 ~~~~~i~~~--~~~~-~-~g~p~~~~~aa----l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 317 (447)
++.+..... ...+ + +.+ .+++ ...++..+ +. +.....+-.++++.|++.|+..|+.+..
T Consensus 210 ~~i~~~~~~~k~~gg~~~~~G----~~~a~~~~~~~~l~~l-~~-~~~~~~~~~~~A~~La~~l~~~~~~~~~ 276 (290)
T PF01212_consen 210 EFIAKARRQRKRLGGGMRQAG----VLAAAELYQFAALRAL-EL-WLERARHANAMAKRLAAGLEALGGVLPR 276 (290)
T ss_dssp HHHHHHHHHHHHHTHHHHHTT----HHHHHHHHHHHHHCHE-EC-SHHHHHCHHHHHHCHHHCHHEECEEEET
T ss_pred HHHHHHHHHHHHhccCeeecc----eeeeechhhHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 543321111 0110 0 011 1222 11223222 22 2455677788899999999888876554
No 292
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=1.2e-13 Score=136.10 Aligned_cols=307 Identities=15% Similarity=0.118 Sum_probs=176.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|++++++...+...+ +++. .+ ...++ ..+++.+...++. ..+.+.||++||..++... ...+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-~~------~~~~~----~~la~~l~~~~~~--~~~~~~SGseA~~~Al~~ar~~~~~ 110 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-LY------LNSLQ----EEVAQKLIGDKDY--LAFFCNSGAEANEAAIKIARKATGK 110 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-cc------CCHHH----HHHHHHHhcCcCC--EEEEcCccHHHHHHHHHHHHHhcCC
Confidence 6889999988775421 2221 11 12233 2333333222221 1244689999999887765 2456
Q ss_pred CEEEEecCCCCcccCCCccccccccccccc-----eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCC-C-C
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-R-D 183 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~-~-~ 183 (447)
++|++.+..+.|..... +...+. .+.. .++..+.....|++++++.+.+ ++.+|++.+.+++ + .
T Consensus 111 ~~vv~~~~~yHg~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~ 181 (375)
T PRK04260 111 QEIITFQNSFHGRTFGS-------MSATGQDKIKDGFGD-GVPHFSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVL 181 (375)
T ss_pred CeEEEECCCcCcccHHH-------HhccCCcccCCCCCC-CCCCeEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCc
Confidence 78888776643321111 111111 0000 0000000012489999988865 7778888744433 2 2
Q ss_pred CC----hHHHHHHHHHhCCEEEEehhhhccccccccC-CC-CCC-cccEEEeCCCcccC-CCCCceEEeecCCcchhhHH
Q 013217 184 FD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 255 (447)
Q Consensus 184 ~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~-~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~~~~~~~ 255 (447)
.+ ++++.++|+++|+++++|++| .|+...+.. .. -.. ..|++ |++|.|+ |.+.|++++++ ++.
T Consensus 182 ~~~~~~l~~~~~l~~~~~~~~i~De~~-~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~------~~~ 252 (375)
T PRK04260 182 PADKDFVKALADYCQETGILLIVDEVQ-TGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS------SLG 252 (375)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH------HHH
Confidence 22 799999999999999999998 465433311 10 001 24665 5779985 56789999987 676
Q ss_pred HHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CC-cEeeeCCCCCeeEEecCC
Q 013217 256 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDLR 330 (447)
Q Consensus 256 ~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~~~~~~~v~~~ 330 (447)
+.+.........+ .+....++...+++.+..+ ++.+++.++.+.+++.|.+ .+ +..+.+ ...++++.+.
T Consensus 253 ~~~~~~~~~~t~~-~~~~~~~aa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~ 326 (375)
T PRK04260 253 GAFGYGSHGSTFG-GNKLSMAAASATLDIMLTA---GFLEQALENGNYLQEQLQKALQDKETVTTVRG--LGYMIGIETT 326 (375)
T ss_pred hhcCCCCCCCCCC-cCHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--cceEEEEEec
Confidence 6665432222222 2334445555566655433 3455556666666665544 22 222222 2445566653
Q ss_pred CCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 331 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 331 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
. +..++.+.|.++||.+. |. ..+.+|++++...+ ++|++++++.|+++
T Consensus 327 ~---~~~~~~~~l~~~Gi~v~----~~-----~~~~lR~~~~~~~t----~~~i~~~l~~l~~~ 374 (375)
T PRK04260 327 A---DLSQLVEAARDKGLIVL----TA-----GTNVIRLLPPLTLT----KEEIEQGIAILSEV 374 (375)
T ss_pred C---cHHHHHHHHHhCCCEEe----cC-----CCCEEEEcCCCccC----HHHHHHHHHHHHHh
Confidence 2 46778899999999984 22 23579999887766 99999999998765
No 293
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.64 E-value=3e-13 Score=133.68 Aligned_cols=313 Identities=16% Similarity=0.129 Sum_probs=177.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
..|.|.+++.+.+.+- ..++. .++ .+.+....+++.+..+.+. .+.++||++|+.+++....
T Consensus 53 ~~p~v~~a~~~q~~~~-~~~~~--~~~------~~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~ 118 (395)
T PRK03715 53 CNPGMVEALAAQAEKL-INPSP--AFY------NEPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGR 118 (395)
T ss_pred CCHHHHHHHHHHHHhc-ccccc--ccc------CHHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence 3799999988776542 22221 111 1233333345555444332 3446899999999887663
Q ss_pred --CCC-CEEEEecCCCCcccCCCccccccccccccce-eEEEecccCC---CCCCCCHHHHHHHhhhhCCcEEEEcCCCC
Q 013217 108 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDE---STGLVDYDMLEKTAILFRPKLIIAGASAY 180 (447)
Q Consensus 108 --~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~---~~~~id~~~l~~~~~~~~~klii~~~~~~ 180 (447)
++| .+|++.+..|.|.... .+..++.. ++....+..+ .....|++++++.+.+ ++.+|++.+...
T Consensus 119 ~~~~~r~~ii~~~~~yHG~t~~-------~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~ 190 (395)
T PRK03715 119 KHKNGAYEIITFDHSFHGRTLA-------TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQG 190 (395)
T ss_pred ccCCCCcEEEEECCCcCCChHH-------HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcC
Confidence 233 5677776554332110 11222211 0000000000 0012578999988875 788888874322
Q ss_pred -CC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCC-CCCceEEeecCCcc
Q 013217 181 -PR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVL 250 (447)
Q Consensus 181 -~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~G-p~gG~i~~~~~~~~ 250 (447)
.+ ..+ +++|+++|++||+++|+|++|. |+-..|.. . .-++ ..|+++++ |.|+| .+.|.+++++
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~---- 263 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKA---- 263 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEcc----
Confidence 22 334 8999999999999999999985 64323221 0 0011 25887665 99965 3456677776
Q ss_pred hhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC----CcEeeeCCCCCeeEE
Q 013217 251 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVL 326 (447)
Q Consensus 251 ~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~ 326 (447)
++.. +......++++ .++..+++..++++.+.++ ++.++..+..++|.+.|++. ++.-+.+ ...+.-
T Consensus 264 --~i~~-~~~~~~~~T~~-g~pl~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG--~Glm~~ 334 (395)
T PRK03715 264 --EVAV-FEAGDQGGTYN-GNPLMTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGLEGERG--EGLLRA 334 (395)
T ss_pred --cccc-ccCCCcCCCCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCcCeEEc--ceeEEE
Confidence 4432 11111112222 2444555555577766543 34677778888888888752 4332222 233344
Q ss_pred ecCCCCCCCHHHHHHHHhhc---CeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMA---SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~---gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
+.+... ....+.+.+.+. ||.+... .+..||+.++...| ++|++++.++|++++..
T Consensus 335 i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~---------~~~~lR~~p~l~~t----~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 335 LLLGKD--IGPQIVEKARDMQPDGLLLNAP---------RPNLLRFMPALNVT----TEEIDQMIAMLRSVLDK 393 (395)
T ss_pred EEecCc--hHHHHHHHHHhccCCCEEEeec---------CCCEEEEeCCcccC----HHHHHHHHHHHHHHHHh
Confidence 454321 234455555455 9998531 12479999998877 99999999999998864
No 294
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.64 E-value=7.6e-15 Score=139.42 Aligned_cols=214 Identities=21% Similarity=0.164 Sum_probs=146.7
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccc
Q 013217 59 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 138 (447)
Q Consensus 59 ~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 138 (447)
.+++..+.+| ..++++-|++. .+..+||..|...++..++++||+|+..+..|+|..... . ......
T Consensus 74 ~~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l--~--~~~~~~ 140 (409)
T KOG0053|consen 74 SGNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRIL--R--KFLPKF 140 (409)
T ss_pred CCCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHH--H--HHHHHh
Confidence 3577788888 57888999886 244699999999999999999999999998888863211 0 001112
Q ss_pred cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccC
Q 013217 139 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 216 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~ 216 (447)
|. ....++ .-|++.+++.+++ ++++|++.+|.||. ..|+++|+++|+++|+++++|.+-..+ ..
T Consensus 141 gi--e~~~vd------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~ 206 (409)
T KOG0053|consen 141 GG--EGDFVD------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YN 206 (409)
T ss_pred Cc--eeeeec------hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----cc
Confidence 21 222211 2356677777777 89999999999997 789999999999999999999984322 22
Q ss_pred CCCCC-cccEEEeCCCcccCCCC---CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHH
Q 013217 217 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 292 (447)
Q Consensus 217 ~~~~~-~~Di~~~s~~K~l~Gp~---gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~ 292 (447)
..|++ +|||++.|..|+++|.. +|.++.+.+ ++.+++..... ...+.++... ....++-+.+ +.-
T Consensus 207 ~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-----~~~~~l~~~~~-~lg~~~~p~~---~~ll~Rglkt--l~l 275 (409)
T KOG0053|consen 207 QDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-----ELASRLKFLQE-DLGWCEDPFD---LFLLSRGLKT--LHL 275 (409)
T ss_pred cChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-----HHHHHHHHHHH-HhcCCCCHHH---HHHHhcCcch--hhh
Confidence 34555 59999999999998865 488888743 67776654331 1122333322 1112222222 233
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013217 293 YQNKVVSNCRALASRLVE 310 (447)
Q Consensus 293 ~~~~~~~~~~~l~~~L~~ 310 (447)
++++..+|+..+++.|.+
T Consensus 276 Ri~~~~ena~~~A~~Le~ 293 (409)
T KOG0053|consen 276 RINKHSENALKIALLLEA 293 (409)
T ss_pred hHHHHHHHHHHHHHHhhh
Confidence 567778888889999877
No 295
>PLN02624 ornithine-delta-aminotransferase
Probab=99.63 E-value=3.7e-13 Score=135.97 Aligned_cols=317 Identities=17% Similarity=0.139 Sum_probs=176.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC----
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 108 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~---- 108 (447)
.|.|.+++.+.+.+ +..+. .++. .+...+++ ++++++++.+. .+..+||++|+..++.....
T Consensus 93 ~p~v~~ai~~ql~~-~~~~~--~~~~--~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-LTLSS--RAFY--NDKFPEFA----EYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-cCCcc--cccC--CHHHHHHH----HHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 79999999887764 22222 1222 12222333 56778887653 23459999999988863321
Q ss_pred ----C-CC-EEEEecCCCCcccCCCccccccccccccceeEEEec-ccCCCC---CCCCHHHHHHHhhhh--CCcEEEEc
Q 013217 109 ----P-HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILF--RPKLIIAG 176 (447)
Q Consensus 109 ----p-gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~---~~id~~~l~~~~~~~--~~klii~~ 176 (447)
+ +. +|+...-.| |+.... .+...+.......+ +..++. ...|++.+++.++.. ++.+|++.
T Consensus 159 ~~g~~~~~~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiE 231 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGCF-----HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFE 231 (474)
T ss_pred hcCCCCCCcEEEEECCCc-----CCCCHH--HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEEC
Confidence 2 33 455554332 221110 11111110000000 000000 013789999888642 46678887
Q ss_pred CCCCCC--CCC----hHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCC-C-cccEEEeCCCcccCC--CCCceEEee
Q 013217 177 ASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF-K-YCDVVTTTTHKSLRG--PRGGMIFFK 245 (447)
Q Consensus 177 ~~~~~~--~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~-~-~~Di~~~s~~K~l~G--p~gG~i~~~ 245 (447)
+..+++ ..+ +++|.++|++||+++|+|++|. |+...+. ..... . ..|++++| |.++| .+.|+++.+
T Consensus 232 pv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~ 308 (474)
T PLN02624 232 PIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLAD 308 (474)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeec
Confidence 554443 445 8999999999999999999984 5432221 11000 1 25788864 98864 466888887
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC------cEeeeCC
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG------YKLVSGG 319 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g------~~~~~~~ 319 (447)
+ ++.+.+.......+.+ .+....++..++++.+.+.+ ..++..+..+.|++.|.+.. +..+.+
T Consensus 309 ~------~i~~~~~~~~~~~T~~-g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg- 377 (474)
T PLN02624 309 K------DVMLCIKPGEHGSTFG-GNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEVRG- 377 (474)
T ss_pred H------HHHhHhccCCcCCCCC-CCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe-
Confidence 6 5655554332222223 34444555555677655433 34455555666666665521 211211
Q ss_pred CCCeeEEecCCCC---CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 320 ~~~~~~~v~~~~~---~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
. ..+..+.+... .....++.+.|.++||.+.. . ....||++++..++ ++|++++++.|++++.
T Consensus 378 ~-G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p----~-----~~~~lR~~p~l~~t----~e~id~~l~~L~~~l~ 443 (474)
T PLN02624 378 R-GLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKP----T-----HDTIIRLAPPLSIS----EDELQECSKALSDVLE 443 (474)
T ss_pred e-EEEEEEEecCCCcChHHHHHHHHHHHhCCeEEec----C-----CCCEEEEECCccCC----HHHHHHHHHHHHHHHH
Confidence 1 12222333221 11245677788899999843 2 23579999887777 9999999999998876
Q ss_pred HH
Q 013217 397 IT 398 (447)
Q Consensus 397 ~~ 398 (447)
..
T Consensus 444 ~~ 445 (474)
T PLN02624 444 HD 445 (474)
T ss_pred HH
Confidence 54
No 296
>PLN00144 acetylornithine transaminase
Probab=99.62 E-value=1.1e-12 Score=129.17 Aligned_cols=316 Identities=17% Similarity=0.131 Sum_probs=178.9
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
+-.|.|.+++.+.+... .+.+..++ .+. .+ ...+++.+..+.+. ....+||++|+.+++....
T Consensus 31 h~~p~v~~ai~~q~~~~---~~~~~~~~--~~~--~~--~la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~ 96 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTL---AHVSNVYH--TIP--QV--ELAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQ 96 (382)
T ss_pred CCCHHHHHHHHHHHHhc---CCcccccc--CHH--HH--HHHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHH
Confidence 34799999988877642 11111111 111 11 22345666654432 2345899999998876431
Q ss_pred C------C------CCEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCC---CCCCHHHHHHHhhhhCCc
Q 013217 108 K------P------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPK 171 (447)
Q Consensus 108 ~------p------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~id~~~l~~~~~~~~~k 171 (447)
. + ..+|+...-.|.|.-. + .....+.. ++....+..++. ...|++++++.+...+++
T Consensus 97 ~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 169 (382)
T PLN00144 97 RVRAPDKKDPAASSATEFVSFSNSFHGRTL-G------ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTA 169 (382)
T ss_pred hccCCCCccccccccceEEEECCCcccccH-H------HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeE
Confidence 1 1 2568887765433310 0 00111100 000000000000 013789999888655788
Q ss_pred EEEEcCCCCCC-C---CC--hHHHHHHHHHhCCEEEEehhhhccccccccC-CC-CCC-cccEEEeCCCcccC-CCCCce
Q 013217 172 LIIAGASAYPR-D---FD--YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSLR-GPRGGM 241 (447)
Q Consensus 172 lii~~~~~~~~-~---~~--~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~-~~~-~~Di~~~s~~K~l~-Gp~gG~ 241 (447)
+|++.+..+++ . .. +++|.++|++||+++|+|+++ .|+...+.. +. ... ..|++++ +|.|+ |.+.|+
T Consensus 170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~-tg~gr~g~~~~~~~~~~~PDi~t~--sK~l~~G~pig~ 246 (382)
T PLN00144 170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQ-CGLGRTGYLWAHEAYGVEPDIMTL--AKPLAGGLPIGA 246 (382)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchHhhhhhcCCCCCEEEe--cccccCCcceEE
Confidence 88887544443 2 23 789999999999999999997 454333321 10 011 2575555 59984 667799
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CC-cEee
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLV 316 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~ 316 (447)
+++++ ++.+.+.......+.+ .+....++..+.++.+.+.++ .+++.+..+.+.+.|.+ .+ +.-+
T Consensus 247 v~~~~------~~~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~~~~~~v 316 (382)
T PLN00144 247 VLVTE------KVASAINPGDHGSTFA-GGPLVCNAALAVLDKISKPGF---LASVAKKGEYLRELLRRKLGGNPHVKEV 316 (382)
T ss_pred EEEcH------HHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhhchH---HHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 99987 6777665433322333 344445555556777765444 33444444444444433 22 1111
Q ss_pred eCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 317 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 317 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.+ ...+.|+.+. .+...+.+.+.++||.+.. +. ....||++++...+ ++|+++..+.|.+++.
T Consensus 317 rg--~G~~~~l~l~---~~~~~~~~~~~~~Gv~i~~----~~----~~~~lrl~p~~~~~----~~~i~~~~~~l~~~l~ 379 (382)
T PLN00144 317 RG--VGLLVGIQLD---VPAGPLVDACRDSGLLVLT----AG----KGDVVRLVPPLVIS----EAELEQAVEILADCLP 379 (382)
T ss_pred ec--CceEEEEEec---CccHHHHHHHHHCCeEEee----cC----CCCEEEEeCCCccC----HHHHHHHHHHHHHHHH
Confidence 22 2445666662 2346788888899999853 21 13589999887566 8999999999999886
Q ss_pred H
Q 013217 397 I 397 (447)
Q Consensus 397 ~ 397 (447)
.
T Consensus 380 ~ 380 (382)
T PLN00144 380 A 380 (382)
T ss_pred h
Confidence 3
No 297
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.62 E-value=7.3e-13 Score=132.75 Aligned_cols=314 Identities=15% Similarity=0.068 Sum_probs=172.3
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cC
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 108 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~ 108 (447)
+.+|.|.+++.+.+.+.. .| ....+...+ .++++++.+... +. .+.++||++|+.+++... ..
T Consensus 64 h~~p~v~~ai~~q~~~~~--~~-----~~~~~~~~~----lae~l~~~~~~~-~~---v~~~~sGseA~e~Alk~ar~~~ 128 (423)
T TIGR00713 64 HAHPRVVEAVKEALERGT--SY-----GAPTEAEIL----LAKEIISRVPSV-EM---VRFVNSGTEATMSAVRLARGYT 128 (423)
T ss_pred CCCHHHHHHHHHHHHhCC--cC-----CCCCHHHHH----HHHHHHHhCCcc-cE---EEEeCCHHHHHHHHHHHHHHhh
Confidence 458999999988776521 11 111111222 235666666533 22 234688999999887753 23
Q ss_pred CCCEEEEecCCCCcccCCCccccccccccccce---------------eEEEecccCCCCCCCCHHHHHHHhhh--hCCc
Q 013217 109 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------------FESMPYRLDESTGLVDYDMLEKTAIL--FRPK 171 (447)
Q Consensus 109 pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---------------~~~~~~~~~~~~~~id~~~l~~~~~~--~~~k 171 (447)
..++|++..+.|.|...... .....+.. ...+.++ ..|+++++++++. .+++
T Consensus 129 gr~~ii~~~~~yhG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~a 197 (423)
T TIGR00713 129 GRDKIIKFEGCYHGHHDALL-----VKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YNDLEALEEVFEEYGEEIA 197 (423)
T ss_pred CCCEEEEEcCCCCCChhhhh-----ccccCcccccCCCCCCCCCcccccceEEeC------CCCHHHHHHHHHHcCCcEE
Confidence 56899999887665421000 00000000 0011111 1389999998874 2567
Q ss_pred EEEEc-CCCCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccCC-CCCC-cccEEEeCCCcccC-CCCCceE
Q 013217 172 LIIAG-ASAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK-YCDVVTTTTHKSLR-GPRGGMI 242 (447)
Q Consensus 172 lii~~-~~~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~-~~~~-~~Di~~~s~~K~l~-Gp~gG~i 242 (447)
+|++. .+++++ ..+ +++|.++|++||+++|+|++| .|+....... ..+. ..|++ +++|.++ |.+.|++
T Consensus 198 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v 274 (423)
T TIGR00713 198 GVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAF 274 (423)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchh--hhhhhhcCCCceeee
Confidence 88875 444444 333 689999999999999999997 5653211100 0011 24655 5679984 5778999
Q ss_pred EeecCCcchhhHHHHhhhc--c-CCCCCCCCcHHHHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHHCCcEeeeC
Q 013217 243 FFKKDPVLGVELESAINNA--V-FPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSG 318 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~--~-~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 318 (447)
++++ ++.+.+... . ...+.+ .+...+++..++++.+.+.++ +...+......+.|.+.+.+.++.....
T Consensus 275 ~~~~------~i~~~~~~~~~~~~~~T~~-~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~ 347 (423)
T TIGR00713 275 GGRR------EIMERLAPEGPVYQAGTLS-GNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVN 347 (423)
T ss_pred eEHH------HHHHhhCcCCCeeeccCCC-CCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 9988 777777531 1 112222 344445555557776654433 2222222223333444444456543211
Q ss_pred CCCCeeEEecCCCCC---------CCH---HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 319 GSDNHLVLVDLRPMG---------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 319 ~~~~~~~~v~~~~~~---------~~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
+.... +.+.+.... .+. ..+.+.|.++||.+... . .+.+|++++ .+ ++|+++
T Consensus 348 ~~g~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~-----~~~~~l~~~--~t----~~~i~~ 411 (423)
T TIGR00713 348 RVGSM-FSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPS----Q-----FEACFLSAA--HT----EEDIEN 411 (423)
T ss_pred eeccE-EEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecC----C-----ccceeeECC--CC----HHHHHH
Confidence 11222 222221110 112 24666777899998532 1 124788654 34 899999
Q ss_pred HHHHHHHHHH
Q 013217 387 IADFIHEGVE 396 (447)
Q Consensus 387 l~~~i~~~l~ 396 (447)
+.+.|.+++.
T Consensus 412 ~~~~l~~~l~ 421 (423)
T TIGR00713 412 TIEAAEEVFA 421 (423)
T ss_pred HHHHHHHHHh
Confidence 9999988875
No 298
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=6.6e-13 Score=132.79 Aligned_cols=328 Identities=17% Similarity=0.110 Sum_probs=180.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++.+.+..- ...... .+ . + ..+....+++.+++.-..+. ....+||++|+.+++....
T Consensus 59 ~~p~v~~ai~~q~~~~-~~~~~~-~~-~-~----~~~~~la~~l~~~~p~~~~~---v~f~~sGseA~e~A~klar~~~~ 127 (423)
T PRK05964 59 NHPYIDQAIREQLDRL-DHVIFA-GF-T-H----EPAERLAQRLVALTPGGLDH---VFFSDSGSVAVEVALKMALQYWR 127 (423)
T ss_pred CCHHHHHHHHHHHhhC-CCcccc-cc-C-C----HHHHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 3689999888777542 110100 01 1 1 11122335666766421121 2335899999998877432
Q ss_pred ---CCC-CEEEEecCCCCcccCCCcccccccc---ccccc--eeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEc
Q 013217 108 ---KPH-DRIMGLDLPHGGHLSHGFMTPKRRV---SGTSI--YFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAG 176 (447)
Q Consensus 108 ---~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~---~~~g~--~~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~ 176 (447)
++| .+|+...-.|.|............. .+.+. ....++++.+ +....+++++++.+.++ ++.+|++.
T Consensus 128 ~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~E 206 (423)
T PRK05964 128 NRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIVE 206 (423)
T ss_pred hcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 133 5788877665443110000000000 00000 1122333221 11112378888888642 34567765
Q ss_pred C--CCCCC-CC----ChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCCC--CCceEEe
Q 013217 177 A--SAYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFF 244 (447)
Q Consensus 177 ~--~~~~~-~~----~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~Gp--~gG~i~~ 244 (447)
+ ...++ .. .+++|.++|++||+++|+|++| .|+...+.. . ...+ ..|++++| |+|+|+ +.|++++
T Consensus 207 p~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~~ 283 (423)
T PRK05964 207 PLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATLC 283 (423)
T ss_pred cccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEEEE
Confidence 3 22222 22 3789999999999999999998 554333311 1 0011 25777654 999654 4577888
Q ss_pred ecCCcchhhHHHHhhhc-----cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeC
Q 013217 245 KKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 318 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~-----~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 318 (447)
++ ++.+.+... ...+..-+.+...+++..++++.+..++ +.+++.+..+++.+.|++. ++..+..
T Consensus 284 ~~------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i~~ 354 (423)
T PRK05964 284 TA------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEP---VLERVAALSAGLAEGLEPFRDLPGVAD 354 (423)
T ss_pred cH------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhccCCCeEE
Confidence 77 677766421 1111111235556666666777665443 4567777777888877663 2322221
Q ss_pred C-CCCeeEEecCCCCC--CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 319 G-SDNHLVLVDLRPMG--IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 319 ~-~~~~~~~v~~~~~~--~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
. ....+..+.+.... .....+.+.|.++||.+... ...+|++++..+| ++|++++.+++++++
T Consensus 355 vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~----------~~~lR~~p~l~~t----~edId~~v~~l~~al 420 (423)
T PRK05964 355 VRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL----------GNTIYLMPPYIIT----AEELDRITDAIVEVA 420 (423)
T ss_pred eecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec----------CCEEEEeCCcccC----HHHHHHHHHHHHHHH
Confidence 0 11233334443221 01456788888999998531 2379999998888 999999999999988
Q ss_pred HH
Q 013217 396 EI 397 (447)
Q Consensus 396 ~~ 397 (447)
..
T Consensus 421 ~~ 422 (423)
T PRK05964 421 DE 422 (423)
T ss_pred hh
Confidence 63
No 299
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=2.2e-12 Score=115.75 Aligned_cols=338 Identities=17% Similarity=0.170 Sum_probs=190.9
Q ss_pred eeEecCCCCC-CHHHHHHHhhhhhccCCCCCCCC--cccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HH
Q 013217 23 LELIASENFT-SRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 98 (447)
Q Consensus 23 i~l~~~~n~~-~~~v~~a~~~~~~~~~~~g~~~~--~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a 98 (447)
..|.-+-|+. -|++.++....+..--++|.-.. -.|+|.+..+.+-+.....+.+-+|++-+. -|+..|+|| .+
T Consensus 32 ~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQs~ 109 (417)
T COG3977 32 AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQSA 109 (417)
T ss_pred ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCccch
Confidence 4555666654 57777776655443222221110 124455555555555557888889987432 377789999 55
Q ss_pred HHHHHHHh---cCCCCE--EE-EecCCCCcccCCCccccccccccccceeEEEe--cccCCC---CCCCCHHHHHHHhhh
Q 013217 99 NFEVYTAI---LKPHDR--IM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP--YRLDES---TGLVDYDMLEKTAIL 167 (447)
Q Consensus 99 ~~~~~~al---~~pgd~--Vl-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~---~~~id~~~l~~~~~~ 167 (447)
.+.++.-+ ...|++ |+ =..|+|-|+-..+ +.+..+.... +.+.+. .+.+|+++|. +.+
T Consensus 110 fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~---------l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e 178 (417)
T COG3977 110 FFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG---------LEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGE 178 (417)
T ss_pred HHHHHHHhcCccCCCcceeEeeccChhhccccccc---------cCccceeeccCCcccccccceeeccCHHHcc--ccc
Confidence 55554444 234552 33 3445555442211 1111111111 112221 2468999886 444
Q ss_pred hCCcEEEEcCCCCCC--CC---ChHHHHHHHHHhCCEEEEehhhhcc---ccccccCCCCCCcccEEEeCCCcc-cCCCC
Q 013217 168 FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISG---LVAASVVADPFKYCDVVTTTTHKS-LRGPR 238 (447)
Q Consensus 168 ~~~klii~~~~~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g---~~~~~~~~~~~~~~Di~~~s~~K~-l~Gp~ 238 (447)
++.+|+++-|.||+ +. ++.+|.++|++||+++++|.|+... +++.+..+. +..--+.++|.+|. |+|.|
T Consensus 179 -~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~-w~~NiilC~SLSK~GLPG~R 256 (417)
T COG3977 179 -STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL-WNENIILCMSLSKLGLPGSR 256 (417)
T ss_pred -ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccccc-CCCCEEEEeehhhcCCCCcc
Confidence 78999999777776 22 4678888999999999999985432 222221110 11234778999995 67888
Q ss_pred CceEEeecCCcchhhHHHHhhhcc-----CCCCCCCCcHHHHHHHHHHHHHhcChhHH---------HHHHHHHHHHHHH
Q 013217 239 GGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFK---------VYQNKVVSNCRAL 304 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~-----~~~~~g~p~~~~~aal~~al~~~~~~~~~---------~~~~~~~~~~~~l 304 (447)
.|+++.++ ++.+.+.... .|+..| ..+++ +.+.+.+.. -|.++.......|
T Consensus 257 ~GIiIane------~viqaitnmn~iisLap~~~G----~Aia~-----~mie~gdl~rlseqVIrPFY~~~~q~~~~~l 321 (417)
T COG3977 257 CGIIIANE------KVIQAITNMNGIISLAPGRMG----PAIAA-----EMIESGDLLRLSEQVIRPFYRNRVQTTIAIL 321 (417)
T ss_pred eeEEEccH------HHHHHHHhccceeeecCCCcc----HHHHH-----HHhhcchHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 89999998 6777765421 232222 12222 111111111 1233333334445
Q ss_pred HHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccC--CCCCCC--CCCCCCeEEEecCccccCCCC
Q 013217 305 ASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN--SVPGDK--SALVPGGIRIGSPAMTTRGFS 380 (447)
Q Consensus 305 ~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~--~~p~~~--~~~~~~~iRig~~~~~~~g~~ 380 (447)
+..|-+..+.+..+ +..-+.|+-+....++..++.+.|++.|+.+-++ ..||-. -|....++|++.. -+
T Consensus 322 ~~~lp~~~~~iHkp-EGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~--~~---- 394 (417)
T COG3977 322 RRYLPEYRCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV--PE---- 394 (417)
T ss_pred HHhcCccceeeecC-CcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC--CC----
Confidence 55554445555443 4556667667777789999999999999998543 234433 2445568999742 22
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013217 381 EKEFVAIADFIHEGVEI 397 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~~ 397 (447)
++.|+.=+.+|.+.++.
T Consensus 395 ~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 395 PEKIEKGVAILAEEVER 411 (417)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66777666666666553
No 300
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.59 E-value=1.3e-12 Score=123.14 Aligned_cols=314 Identities=15% Similarity=0.123 Sum_probs=185.8
Q ss_pred cCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCcccccccc
Q 013217 58 YGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV 135 (447)
Q Consensus 58 ~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~ 135 (447)
||.+....++-...++.....++.+ .+.| .+..|+|+ .+++.+++.++++||.|++..+.+.+.+. .+
T Consensus 96 Yg~s~G~peLl~fik~h~~~~ih~p~~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~ 165 (472)
T KOG0634|consen 96 YGQSSGIPELLLFIKDHNRPTIHAPPYKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SM 165 (472)
T ss_pred cccccCcHHHHHHHHHhccccccCCCCCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hc
Confidence 4444445555433333222233344 4556 45558886 99999999999999999999888776553 23
Q ss_pred ccccceeEEEecccCCCCCCCCHHHHHHHhhh--------hCCcEEEEc-CCCCCC--CCCh---HHHHHHHHHhCCEEE
Q 013217 136 SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--------FRPKLIIAG-ASAYPR--DFDY---PRMRQIADAVGALLM 201 (447)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~--------~~~klii~~-~~~~~~--~~~~---~~i~~ia~~~g~~li 201 (447)
+..| ++++|++.| ...+|+|.|++.... .+|++++.- .-+||+ .... ++|.++|++|+.+++
T Consensus 166 ~a~g--v~~ipv~md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIV 241 (472)
T KOG0634|consen 166 EALG--VKIIPVKMD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIV 241 (472)
T ss_pred cccC--ceEEecccc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEE
Confidence 4445 577786665 456999999998753 146776654 335554 4443 699999999999999
Q ss_pred Eehhhhcccccc-------------------ccCCCCCC----cccEEEeCCCccc-CCCCCceEEeecCCcchhhHHHH
Q 013217 202 MDMAHISGLVAA-------------------SVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESA 257 (447)
Q Consensus 202 vD~a~~~g~~~~-------------------~~~~~~~~----~~Di~~~s~~K~l-~Gp~gG~i~~~~~~~~~~~~~~~ 257 (447)
.|+.++.-.+.. .+.++.+. +.-+-..|++|-+ +|.|-||+.+++ .+.++
T Consensus 242 eDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~------~~l~r 315 (472)
T KOG0634|consen 242 EDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS------LFLKR 315 (472)
T ss_pred ecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH------HHHHH
Confidence 999865432221 00111111 2225668999987 588889999998 55555
Q ss_pred hhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHH----HHHHHHHHHHHHHHHHHHH---CC-cEeeeCCCCCeeEEecC
Q 013217 258 INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK----VYQNKVVSNCRALASRLVE---LG-YKLVSGGSDNHLVLVDL 329 (447)
Q Consensus 258 i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~----~~~~~~~~~~~~l~~~L~~---~g-~~~~~~~~~~~~~~v~~ 329 (447)
+-...--.++ +|+.....-+.+-|+.+.++||. +.+.....++..+..+|.+ .. ++++. +...++.|+.+
T Consensus 316 il~~ae~~t~-~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~-P~aGmFiwv~i 393 (472)
T KOG0634|consen 316 ILDLAEVATS-GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHP-PKAGMFIWVEI 393 (472)
T ss_pred Hhhhcceeec-CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEec-CCcceEEEEEe
Confidence 4432221222 24332222233345555555553 3333444566667777766 23 34443 35678888877
Q ss_pred C------CCCCC-H-HHHHHHHhhcCeEEccCCCC-CCCCCC-CCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 330 R------PMGID-G-ARVEKILDMASITLNKNSVP-GDKSAL-VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 330 ~------~~~~~-~-~~~~~~L~~~gI~v~~~~~p-~~~~~~-~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
. +.+++ . +.+...+.++||.+-.+... .++... ..-.+|++...+- .+++++-++.+..+++..
T Consensus 394 ~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~-----~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 394 PYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAE-----PEKLDEGIERFGSVIKEH 467 (472)
T ss_pred cccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCC-----HHHHHHHHHHHHHHHHHH
Confidence 4 12333 2 23445667899987432110 011111 1237999865433 677777777777777643
No 301
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.57 E-value=4.6e-12 Score=125.61 Aligned_cols=320 Identities=16% Similarity=0.140 Sum_probs=177.7
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
.-.|.|.+++.+.+.+-. +.+..++ ++. .+ ...+++.++.... + . ....+||++|+..++....
T Consensus 56 h~~p~v~~ai~~q~~~~~---~~~~~~~--~~~--~~--~la~~L~~~~~~~-~-~--v~f~~sGseA~e~AlklAr~~~ 122 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLW---HTSNVFY--SAP--PL--KLAEELVTASRFA-E-K--VFLCNSGTEANEAAIKLVRKWA 122 (408)
T ss_pred CCCHHHHHHHHHHHHhcc---ccccccC--CHH--HH--HHHHHHHhhCCCC-C-E--EEEcCchHHHHHHHHHHHHHHH
Confidence 347899999888776421 1111111 111 11 2224555555322 2 1 2446899999998876432
Q ss_pred ---C--C-CCEEEEecCCCCcccCCCccccccccccccc-----eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 108 ---K--P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 108 ---~--p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
+ + ..+|+...-.|.|... + .+...+. .+...+..+. .-...|++.+++++...++.+|++.
T Consensus 123 ~~~g~~~~r~~ii~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~aavi~e 194 (408)
T PRK04612 123 SSQGRPADKRVIVTFRGSFHGRTL-A------AVTATAQPKYQEGYEPLPGGFR-YVDFNDVEALEAAMAGGDVAAVMLE 194 (408)
T ss_pred HhhCCCCCCcEEEEECCCcCCccH-H------HHHhcCCcccccCCCCCCCCce-EcCCCCHHHHHHhhCCCCEEEEEEC
Confidence 1 2 2468877655433310 0 0111110 0100000000 0012378999988865456666666
Q ss_pred CCCCC-CCC--C---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC-CCCCceEEeec
Q 013217 177 ASAYP-RDF--D---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKK 246 (447)
Q Consensus 177 ~~~~~-~~~--~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~ 246 (447)
+.... +.. + +++|.++|++||+++|+|++|. |+...+.. . ...+ ..|+++ ++|.++ |.+.|++++++
T Consensus 195 P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t--~~K~l~~G~piga~~~~~ 271 (408)
T PRK04612 195 PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVT--LAKALGGGFPIGAMLAGP 271 (408)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEE--EcchhcCCCceEEEEECH
Confidence 33222 222 2 7899999999999999999984 54333311 0 0001 135554 469984 55668888776
Q ss_pred CCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeeeC--CCCC
Q 013217 247 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--GSDN 322 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~ 322 (447)
++.+.+......++.+ .+....++...+++.+.++ ++.++..+..++|.+.|++. .+.++.. +. .
T Consensus 272 ------~~~~~~~~~~~~~t~~-~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-G 340 (408)
T PRK04612 272 ------KVAETMQFGAHGTTFG-GNPLAAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFAQVRGR-G 340 (408)
T ss_pred ------HHHhhhcCCCcCCCCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-c
Confidence 6666665433333333 3455555556677776543 34667777777888877662 1222221 11 2
Q ss_pred eeEEecCCCC-CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 323 HLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 323 ~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
.+.-+.+.+. .-....+.+.|.++||.+.. . .++.+|+.++...+ ++|++++.+.+.+++...
T Consensus 341 l~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~----~-----g~~~lRl~Ppl~it----~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 341 LMLGAVLAPAHAGQAGAILDLAAEHGLLLLQ----A-----GPDVLRFVPALNLT----DAELADGLARLRLALADY 404 (408)
T ss_pred eEEEEEecCchhhHHHHHHHHHHHCCeEEee----C-----CCCEEEEcCCccCC----HHHHHHHHHHHHHHHHHH
Confidence 2223333221 11245677888899999842 1 23589999887666 999999999999998754
No 302
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.56 E-value=7.9e-13 Score=125.64 Aligned_cols=300 Identities=16% Similarity=0.216 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccceeeecCCc-HHHHHHHHHHh---cCC--C---CEEEEecCCCCcccCCCccccccc
Q 013217 64 IDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI---LKP--H---DRIMGLDLPHGGHLSHGFMTPKRR 134 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~al---~~p--g---d~Vl~~~~~~~~~~~~~~~~~~~~ 134 (447)
...+|.++...++.+|+.+.++++. .|+| |++..+..... ... | ..+++....|.+.- +.
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~~g~---~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~e--------K~ 186 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDSCGC---GTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFE--------KA 186 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCccccCc---cccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHH--------HH
Confidence 4567778889999999999765432 2444 57754443332 111 1 12333322221110 11
Q ss_pred cccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHH-hCCEEEEehhhhcccc
Q 013217 135 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLV 211 (447)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~-~g~~livD~a~~~g~~ 211 (447)
....+. ++..+++++.++.+|+..+.+.+++ +|.+++...+++|. ..|+++|.++.-+ +++++++|++ ..|++
T Consensus 187 a~yf~v--~l~~V~~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~GgFi 262 (491)
T KOG1383|consen 187 ARYFEV--ELREVPLDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGGFI 262 (491)
T ss_pred HhhEEE--EEEeeeccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeeccc-Ccccc
Confidence 122333 4445557777899999999999998 99999988777775 6789999999998 9999999988 45555
Q ss_pred cc-ccC-CCCCC----cccEEEeCCCcccCCCCC-ceEEeecCCcchhhHH-HHh--hhccC------CCCCCCCcHHHH
Q 013217 212 AA-SVV-ADPFK----YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE-SAI--NNAVF------PGLQGGPHNHTI 275 (447)
Q Consensus 212 ~~-~~~-~~~~~----~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~-~~i--~~~~~------~~~~g~p~~~~~ 275 (447)
.. +.. ..+++ +.--++.++||+-..|.| |+++.++. ++. +.+ ..... |+..|+-...++
T Consensus 263 ~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k-----~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 263 NPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNK-----ELLPHQLFFHTDWLGGIYASPTLNGSRPGSQV 337 (491)
T ss_pred ccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEccc-----ccccceEEEeccccCccccCcccccCCcccHH
Confidence 43 221 11222 566788999998677888 88888775 221 111 11111 222333344567
Q ss_pred HHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCC
Q 013217 276 GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS 354 (447)
Q Consensus 276 aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~ 354 (447)
++.++++-.+..+||.+..+++.++++.|++.+++ .++.+++.+ + ..++.+.....+-.++.+.|.+.|..++...
T Consensus 338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp-~--vs~~~~~s~~~~i~elsd~l~~~GW~lnalq 414 (491)
T KOG1383|consen 338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP-L--VSFILFGSNDVNIFELSDLLRKKGWILNALQ 414 (491)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC-c--EEEEEccCCccchhhhhHHHHhcCcCccccC
Confidence 77788887777889999999999999999999998 678887652 2 2233333444567889999999999987643
Q ss_pred CCCCCCCCCCCeEEEecCccccCCCCHHH-HHHHHHHHHHHHHHH
Q 013217 355 VPGDKSALVPGGIRIGSPAMTTRGFSEKE-FVAIADFIHEGVEIT 398 (447)
Q Consensus 355 ~p~~~~~~~~~~iRig~~~~~~~g~~~~d-i~~l~~~i~~~l~~~ 398 (447)
.| .++-++....+. .++ .++++.-|.+++...
T Consensus 415 ~P--------~a~Hi~vt~~~~----~~~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 415 FP--------AAIHICVTRVHA----REDVADRFVADIRKVVEEL 447 (491)
T ss_pred CC--------CceEEEEEeeec----cHHHHHHHHHHHHHHHHHH
Confidence 33 255565544444 344 455555555655544
No 303
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.56 E-value=2.7e-13 Score=125.75 Aligned_cols=273 Identities=16% Similarity=0.269 Sum_probs=145.8
Q ss_pred CHHHHHHHhhhhhc--cC--CCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC
Q 013217 33 SRAVMEAVGSCLTN--KY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 108 (447)
Q Consensus 33 ~~~v~~a~~~~~~~--~~--~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~ 108 (447)
...|++|+...-.+ ++ +.||.. +....+.+| +-+++.||++.+- +.-|..|||+|+..++.++++
T Consensus 26 q~KVL~Af~~~~vs~~hf~~tTGYGY-----~D~GRd~le----~iyA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~Lr 94 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDSHFAGTTGYGY-----DDIGRDKLE----RIYADVFGAEDAL--VRPQFVSGTHAIALALFGVLR 94 (403)
T ss_dssp HHHHHHHHHHTT--GGGCS---TT-T-----T-HHHHHHH----HHHHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCChhhcCCCCcCCC-----CCccHHHHH----HHHHHHhCchhhh--hcccccchHHHHHHHHHhcCC
Confidence 45677777653222 11 123322 233466777 4689999999642 355678999999999999999
Q ss_pred CCCEEEEec-CCCCcc---cCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCCCCC-
Q 013217 109 PHDRIMGLD-LPHGGH---LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR- 182 (447)
Q Consensus 109 pgd~Vl~~~-~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~-~~~~~~- 182 (447)
|||+.+... .+|.-. +...- .....+.-.|..|+- +++. +++.+|++.+++.+++ +||+|.+. +-.|..
T Consensus 95 pGD~ll~~tG~PYDTL~~VIG~~g-~~~GSL~e~Gi~Y~~--v~L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R 169 (403)
T PF06838_consen 95 PGDELLSITGKPYDTLEEVIGIRG-NGPGSLKEFGIKYRE--VPLT-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWR 169 (403)
T ss_dssp TT-EEEESSSS--CCHHHHHTSSS-SSSSSTGGGT-EEEE----B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS
T ss_pred CCCeEEEcCCCchhhHHHHhCCCC-CCCCChHHhCceeEE--Eeec-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCC
Confidence 999999644 122100 00000 000122233444444 4454 4688999999999997 99999997 445654
Q ss_pred -CCChHHHHH---HHHHh--CCEEEEehhhhccccccccCCCCCC-cccEEEeCCCcccCC---CCCceEEeecCCcchh
Q 013217 183 -DFDYPRMRQ---IADAV--GALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGV 252 (447)
Q Consensus 183 -~~~~~~i~~---ia~~~--g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~G---p~gG~i~~~~~~~~~~ 252 (447)
.+.+++|.+ ++|+. +++++||.++. -++- ...|.. ++|++++|+-|+.+| |.||+|+.++
T Consensus 170 ~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG-EFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~------ 239 (403)
T PF06838_consen 170 PSLTIEEIKEIIKFVKEINPDVIIFVDNCYG-EFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK------ 239 (403)
T ss_dssp ----HHHHHHHHHHHHHH-TTSEEEEE-TTT-TTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH------
T ss_pred CCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc-eecc---ccCccccchhheeccceeCCCCCccCcCCEEechH------
Confidence 444555544 45544 79999999852 2221 123433 799999999999864 7889999998
Q ss_pred hHHHHhhh-ccCCCCC---C-CCcHH--HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCe--
Q 013217 253 ELESAINN-AVFPGLQ---G-GPHNH--TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH-- 323 (447)
Q Consensus 253 ~~~~~i~~-~~~~~~~---g-~p~~~--~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~-- 323 (447)
++.++... ...||.. | +.... .+.++..| ...+.+-.+-+...+.-+++.|+++.+...+.+
T Consensus 240 ~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFlA---------P~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~D 310 (403)
T PF06838_consen 240 DLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFLA---------PHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSD 310 (403)
T ss_dssp HHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SS
T ss_pred HHHHHHHhhhcCCccccccccCcchHHHHHhHHhhc---------hHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCc
Confidence 77776543 3456541 1 11111 11111111 233455556666667777889999887433222
Q ss_pred -eEEecCCCCCCCHHHHHHHHh
Q 013217 324 -LVLVDLRPMGIDGARVEKILD 344 (447)
Q Consensus 324 -~~~v~~~~~~~~~~~~~~~L~ 344 (447)
+..+.+. +.+.+..+++
T Consensus 311 iIQai~l~----~~e~l~~FC~ 328 (403)
T PF06838_consen 311 IIQAIELG----SPEKLIAFCQ 328 (403)
T ss_dssp S-EEEE-S----SHHHHHHHHH
T ss_pred eEEEEECC----CHHHHHHHHH
Confidence 1233443 5677777664
No 304
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.56 E-value=4.2e-13 Score=118.00 Aligned_cols=278 Identities=18% Similarity=0.181 Sum_probs=175.6
Q ss_pred cCCCCCccceeeecCCcH-HHHHHHHHHhcCCC-CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCC
Q 013217 79 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 156 (447)
Q Consensus 79 ~g~~~~~~~~~v~~~sGs-~a~~~~~~al~~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 156 (447)
-++.++ |+....|+ +.+.+++++.+.|| ++|+..+|.|+.+.- .....+ .+++.+++++ ++.+
T Consensus 82 kpLt~d----nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v--------~A~iNd--~eVvkvpl~p-dF~l 146 (375)
T KOG0633|consen 82 KPLTSD----NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVV--------DAAIND--AEVVKVPLNP-DFSL 146 (375)
T ss_pred CCCCcc----ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEE--------EeecCC--ceEEEecCCC-Cccc
Confidence 345554 55668898 88898999999999 899998887765421 112233 4666777775 6899
Q ss_pred CHHHHHHHhhhh-CCcEEEEcCCCCCC--CCChHHHHHHHHHh-CCEEEEehhhhccccccccCCCCC--Cccc-EEEeC
Q 013217 157 DYDMLEKTAILF-RPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPF--KYCD-VVTTT 229 (447)
Q Consensus 157 d~~~l~~~~~~~-~~klii~~~~~~~~--~~~~~~i~~ia~~~-g~~livD~a~~~g~~~~~~~~~~~--~~~D-i~~~s 229 (447)
|.|++.+.++.. ++|.+++++|+||+ .+..+.|.++.+-- |.++++|+|+ ..+...+ ...++ .+-. ++.-+
T Consensus 147 nvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAY-idFsg~~-S~~~lV~kYpNLivlqT 224 (375)
T KOG0633|consen 147 NVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAY-IDFSGVE-SRMKLVKKYPNLIVLQT 224 (375)
T ss_pred cHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeee-Eeecccc-ccchHhHhCCceeehhh
Confidence 999999988764 78999999999987 55566666666532 6899999995 3332211 01111 1333 56678
Q ss_pred CCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 013217 230 THKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 307 (447)
Q Consensus 230 ~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (447)
++|.+ +|.|.|+-+.+. .+.+.+++...|+..+.+. ..+|++ |+..-....++.+.+.+.+.+.+|.+.
T Consensus 225 lSKsfGLAGiRvG~~~~~~------~ia~iln~~KaPYNiS~~~--s~~AL~-Als~~n~kkme~~rdaiv~er~RL~ke 295 (375)
T KOG0633|consen 225 LSKSFGLAGIRVGYGAFPL------SIAEILNRAKAPYNISVAG--SVAALA-ALSDSNGKKMEDVRDAIVRERERLFKE 295 (375)
T ss_pred hhhhcCcceeEeecccccH------HHHHHHHhccCCccccchh--HHHHHH-hcCcccchHHHHHHHHHHHHHHHHHHH
Confidence 88975 688889988888 6888888777776433221 122332 222111122467788888889999999
Q ss_pred HHH-CCcEeeeCCCCCeeEEecCCCC--CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHH
Q 013217 308 LVE-LGYKLVSGGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 384 (447)
Q Consensus 308 L~~-~g~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di 384 (447)
|.+ .++.-+.++.++.+.++.+... +.......+.+.+.||.|+.. +. .+.-.+++||+.+ + +|+-
T Consensus 296 Lt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfr---gs-e~~c~G~lRitvG---t----~Een 364 (375)
T KOG0633|consen 296 LTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFR---GS-EEGCKGYLRITVG---T----PEEN 364 (375)
T ss_pred hhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEc---CC-ccccceeEEEEcC---C----cccc
Confidence 988 3444344567777777766431 222223344456789999852 11 1123567998643 1 4454
Q ss_pred HHHHHHHHH
Q 013217 385 VAIADFIHE 393 (447)
Q Consensus 385 ~~l~~~i~~ 393 (447)
..+.+.+++
T Consensus 365 tvL~k~~K~ 373 (375)
T KOG0633|consen 365 TVLMKCLKQ 373 (375)
T ss_pred hHHHHHHHh
Confidence 555555544
No 305
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.56 E-value=1.7e-12 Score=132.55 Aligned_cols=232 Identities=18% Similarity=0.161 Sum_probs=149.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC----C-----C------------------C---
Q 013217 62 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P-----H------------------D--- 111 (447)
Q Consensus 62 ~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~----p-----g------------------d--- 111 (447)
+....+|+.+.+++++++|.+. .|+. .+++||.||+.++.+..+ | + |
T Consensus 119 P~~t~lE~~vi~~la~l~G~~~-~~G~--~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~ 195 (608)
T TIGR03811 119 PATSQMEEEVGKEFATLMGYKN-GWGH--IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIM 195 (608)
T ss_pred chHHHHHHHHHHHHHHHhCCCC-CCeE--EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccc
Confidence 4467899999999999999975 4643 346777999876654321 0 0 0
Q ss_pred ----------------------------EEEEecCCCCcccCCCcccccccccccccee-EEEecccCCCCCCCCHHHHH
Q 013217 112 ----------------------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLE 162 (447)
Q Consensus 112 ----------------------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~id~~~l~ 162 (447)
+++++. .+|++. .+.+.+.|.+. .++.+++| +++.+|+++|+
T Consensus 196 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~-----~KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~ 266 (608)
T TIGR03811 196 DLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSW-----LKAADIIGIGLDQVIPVPVD-SNYRMDINELE 266 (608)
T ss_pred ccccccccchhhhhhhccccccccccceEEEECC---CccHHH-----HHHHHHcCCCcccEEEeecC-CCCcCCHHHHH
Confidence 233322 222221 13445666542 34566677 56899999999
Q ss_pred HHhhhh----CC-cEEEEc--CCCCCCCCChHHHHHHH---HHhCC--EEEEehhhhcccc---ccc----cCC------
Q 013217 163 KTAILF----RP-KLIIAG--ASAYPRDFDYPRMRQIA---DAVGA--LLMMDMAHISGLV---AAS----VVA------ 217 (447)
Q Consensus 163 ~~~~~~----~~-klii~~--~~~~~~~~~~~~i~~ia---~~~g~--~livD~a~~~g~~---~~~----~~~------ 217 (447)
+.+++. .| -+|+.+ ++..+...|+++|+++| +++|+ |++||+|++ |.. ..+ ..+
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyG-G~~~~l~~~~~~~~~p~~~~~~ 345 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYG-GYGRAIFLDEDDNFIPYDDLQE 345 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecccc-chhhhhhccccccccccchhhc
Confidence 988642 22 334444 33333478999999999 66888 699999964 421 111 000
Q ss_pred -----------------------CCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhc---c------CC
Q 013217 218 -----------------------DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA---V------FP 264 (447)
Q Consensus 218 -----------------------~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~---~------~~ 264 (447)
..++.+|.++..+||++..|-+ |++++++. .+.+.+... . .|
T Consensus 346 ~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~-----~~~~~~~~~a~Yl~~~~~~~p 420 (608)
T TIGR03811 346 VHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI-----RMRDVISYFATYVFEKGADIP 420 (608)
T ss_pred ccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH-----HHHHHHhcCcchhccccccCc
Confidence 0234699999999999988988 99999885 433333210 0 01
Q ss_pred ------CCCCCCcHHHHHHHHHHHHHh--cChhHHHHHHHHHHHHHHHHHHHHHC
Q 013217 265 ------GLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNCRALASRLVEL 311 (447)
Q Consensus 265 ------~~~g~p~~~~~aal~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (447)
+..|+..-...++++.+++.+ ...+|.+++++..++++++.+.|.+.
T Consensus 421 ~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 421 ALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 112333334456777888876 56689999999999999999999874
No 306
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.55 E-value=4.8e-13 Score=126.72 Aligned_cols=237 Identities=16% Similarity=0.149 Sum_probs=146.6
Q ss_pred hcCeeEec-------CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCc-hhHHHHHHHHHHHHHHHHcCCCCCccceeee
Q 013217 20 FKSLELIA-------SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQ 91 (447)
Q Consensus 20 ~~~i~l~~-------~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g-~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~ 91 (447)
+.-||++- +-+..++++++++...+.. |.+ ..++.+ ......+- ......+.++|++.. + |
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~-~v~----Le~~l~~g~~~~R~~-~~~~~~~~~~~aea~---~-i- 88 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRA-PVE----LETDLKTGKRGARLT-ELAELLCGLTGAEAA---A-I- 88 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhcc-cce----eeeecccchhhHHHH-HHHHHHhcccchhhe---e-e-
Confidence 55566553 4456799999998776654 211 111211 12222222 223345555555542 2 2
Q ss_pred cCCcHHHHHHHHHHhcCCCCEEEEecCCC-CcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCC
Q 013217 92 PLSGSPANFEVYTAILKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 170 (447)
Q Consensus 92 ~~sGs~a~~~~~~al~~pgd~Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~ 170 (447)
+..-+.|++.++.++..++..|+..-+.- |+++.. ...+...|. +.+.++ .++.-...+++.++.+ ++
T Consensus 89 vnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v-----~d~~~~aG~--~l~EvG---~tn~t~~~d~~~AIne-~t 157 (395)
T COG1921 89 VNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRV-----PDIIRLAGA--KLVEVG---TTNRTHLKDYELAINE-NT 157 (395)
T ss_pred ECCcHHHHHHHHhhhccCCeEEEEccccccCCCCCh-----hHHHHHcCC--EEEEec---ccCcCCHHHHHHHhcc-CC
Confidence 24555788878888777555555433332 344322 134556665 555644 3456788889999988 88
Q ss_pred cEEEEc-CCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcccccc---ccCCCCCCcccEEEeCCCcccCCCCCceEEe
Q 013217 171 KLIIAG-ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVADPFKYCDVVTTTTHKSLRGPRGGMIFF 244 (447)
Q Consensus 171 klii~~-~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~---~~~~~~~~~~Di~~~s~~K~l~Gp~gG~i~~ 244 (447)
++++=. ++||+. ..+.+++.++||++|+++++|.+ +|.... ++....-.++|++++|++|.|.||++|+|++
T Consensus 158 a~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~G 235 (395)
T COG1921 158 ALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLA--SGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVG 235 (395)
T ss_pred eeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecC--CccccccccchhHHHhcCCCEEEEecchhcCCCccceEec
Confidence 876544 556653 67889999999999999999997 443211 1111111279999999999999999999999
Q ss_pred ecCCcchhhHHHHhhhccC--CCCCCCCcHHHHHHHHHHHHHhcChh
Q 013217 245 KKDPVLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPE 289 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~--~~~~g~p~~~~~aal~~al~~~~~~~ 289 (447)
++ ++.++++.... .... .-..++++.++|+.....+
T Consensus 236 kK------elI~~lq~~~l~Ralrv---~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 236 KK------ELIEKLQSHPLKRALRV---DKETLAALEAALELYLQPE 273 (395)
T ss_pred hH------HHHHHHHhhhhhhhhhc---CcHhHHHHHHHHHHHcCch
Confidence 99 78887765321 1112 2245788888998877643
No 307
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.55 E-value=8.6e-12 Score=124.31 Aligned_cols=320 Identities=17% Similarity=0.139 Sum_probs=173.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
..|.|.+++.+.+.+-. +.. ++.. .+ ......+++.+++....+ ....++||++|+.+++....
T Consensus 92 ~hp~v~~Av~~ql~~l~---~~~-~~~~-~~----~~~~lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t~ 159 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQP---LHS-QELL-DP----LRALLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQS 159 (442)
T ss_pred CCHHHHHHHHHHHHhCC---Ccc-cccC-CH----HHHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHh
Confidence 47999999888775421 111 1111 11 111223566666643322 12346899999998876431
Q ss_pred -CCCCEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCC---CCCCHHHHHHHhhh-----hCCcEEEEcC
Q 013217 108 -KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAGA 177 (447)
Q Consensus 108 -~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~id~~~l~~~~~~-----~~~klii~~~ 177 (447)
+...+|++..-.|.|... + .+..++.. ++....+..+.- -..|.+++++.++. .++.+|++.+
T Consensus 160 ~~gr~~ii~~~~~yHG~t~-~------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEp 232 (442)
T TIGR03372 160 PRGKFTFIAASGAFHGKSL-G------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEP 232 (442)
T ss_pred hcCCcEEEEECCCccCCCH-H------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 123578887765544311 0 01111110 000000000000 02367777776642 2455666652
Q ss_pred C-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCCC--CCceEEeec
Q 013217 178 S-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFKK 246 (447)
Q Consensus 178 ~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~Gp--~gG~i~~~~ 246 (447)
- ...+ ..+ +++++++|++||+++|+|++| .|+-..|.. . .-.+ ..|++++ .|.|+|. +.|.+++++
T Consensus 233 v~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~-tG~GRtG~~~a~e~~gv~PDivt~--gK~lg~G~~Pigavv~~~ 309 (442)
T TIGR03372 233 IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ-TGMGRTGKMFACEHEGVQPDILCL--AKALGGGVMPIGATIATE 309 (442)
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc-cCCCccccchhhhhcCCCCCeeee--hhhhcCCcccceEEEecH
Confidence 1 1222 444 799999999999999999998 454222211 0 0011 2688875 5999643 456666766
Q ss_pred CCcchhhHHHHhhhc--cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcE-eeeCC-C
Q 013217 247 DPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVSGG-S 320 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~--~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~-~ 320 (447)
++.+.+... .+.++.++ ++..+++..++++.+.+++ ..++..+..++|.+.|++. .+. .+..- .
T Consensus 310 ------~i~~~~~~~~~~~~~T~~g-np~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG 379 (442)
T TIGR03372 310 ------AVFSVLFDNPFLHTTTFGG-NPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEARG 379 (442)
T ss_pred ------HHHHhhhccCccccCCCCC-CHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 666665321 11122222 4555555556777766544 3555666667777777652 121 11110 1
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
...+.-+.+.... ....+.+.|.++||.+... .| ....+|+.++...| ++|++++.+++++++
T Consensus 380 ~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~-~~------~~~~lr~~Ppl~~t----~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 380 KGLLMAIEFRDNE-IGYAFAKELFQQNILVAGT-LN------NAKSIRIEPPLTIT----IEQCALVIKAAKDAL 442 (442)
T ss_pred ceEEEEEEeCChH-HHHHHHHHHHHCCcEEeec-CC------CCCEEEEECCcccC----HHHHHHHHHHHHHhC
Confidence 1233334443221 2456778888899998532 11 13589999887777 999999999998763
No 308
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.55 E-value=2.7e-12 Score=135.59 Aligned_cols=274 Identities=13% Similarity=0.064 Sum_probs=174.7
Q ss_pred HHHHHHHHcCCCCCccceeeecCCc-HHHHHHHHHHh---cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEe
Q 013217 71 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 146 (447)
Q Consensus 71 ~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~al---~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 146 (447)
-+..+++++|++.. |.....+ |.+..+++++. .+++++|++++..|+....... ......+++++.
T Consensus 114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~------t~a~~~g~~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLH------TRAKPFGIEVIV 183 (939)
T ss_pred HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHH------HHHHhcCcEEEE
Confidence 45789999999953 3323333 34445555553 2345899999888866542110 011223344444
Q ss_pred cccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-ccc
Q 013217 147 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 224 (447)
Q Consensus 147 ~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~D 224 (447)
+|+++|++.+ ++..+++..|++.+ ..|+++|.+++|++|++++++.-..+.. +...|-+ ++|
T Consensus 184 ---------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD 247 (939)
T TIGR00461 184 ---------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD 247 (939)
T ss_pred ---------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc
Confidence 2455666554 45677777777776 5599999999999999999976543332 2233333 699
Q ss_pred EEEeCCCccc-----CCCCCceEEeecCCcchhhHHHHhhhcc------------C-----C---C---CCCCCcH---H
Q 013217 225 VVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINNAV------------F-----P---G---LQGGPHN---H 273 (447)
Q Consensus 225 i~~~s~~K~l-----~Gp~gG~i~~~~~~~~~~~~~~~i~~~~------------~-----~---~---~~g~p~~---~ 273 (447)
|++++.+++. +||..|++.++++ +...+.... + . . .-++.|. .
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~------l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q 321 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDE------YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ 321 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHh------hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence 9988887763 4777799999984 333221000 0 0 0 0122222 2
Q ss_pred HHHHHHHH--HHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEc
Q 013217 274 TIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 351 (447)
Q Consensus 274 ~~aal~~a--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~ 351 (447)
.+.++.++ +..+...|+++..+++...+.+|++.|.+.|+++..+ .--..+.+.+. ..+.+++.+.|.++||.++
T Consensus 322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~-~fF~~~~v~~~--~~~~~~i~~~~~~~gi~l~ 398 (939)
T TIGR00461 322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK-TWFDTLTVKVG--NGISSELLKAAEEFNINLR 398 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CccceEEEEeC--CCCHHHHHHHHHHCCCeee
Confidence 23333333 3444556788889999999999999999999988754 11112334442 1356789999999999986
Q ss_pred cCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 352 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 352 ~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
.. ..+.++++++..+| ++|++.+++++.
T Consensus 399 ~~---------~~~~i~~s~~E~~t----~~di~~l~~~~~ 426 (939)
T TIGR00461 399 AV---------DTTTVGIALDETTT----KADVENLLKVFD 426 (939)
T ss_pred ec---------CCCEEEEEeecCCC----HHHHHHHHHHhc
Confidence 41 13479999999998 999999999995
No 309
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.55 E-value=2.4e-11 Score=123.17 Aligned_cols=323 Identities=14% Similarity=0.095 Sum_probs=174.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcC-CCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g-~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
-.|.|.+++.+.+.. +....+.. ....+...++ .+++.+++. .+.+ -....+||++|+.+++....
T Consensus 106 ~hp~v~~Av~~ql~~-~~~~~~~~--~~~~~~~~~l----ae~L~~~~~~~~~~---~v~f~~SGsEA~e~AlKlAr~~~ 175 (504)
T PLN02760 106 SEPRLVAAATEQLNK-LPFYHSFW--NRTTKPSLDL----AKELLEMFTARKMG---KVFFTNSGSEANDTQVKLVWYYN 175 (504)
T ss_pred CCHHHHHHHHHHHhh-ccceeccc--ccCcHHHHHH----HHHHHhhcCCCCCC---EEEEeCChHHHHHHHHHHHHHHH
Confidence 479999999887754 21111100 0112222222 245666643 2222 12335899999999887652
Q ss_pred ----CCC-CEEEEecCCCCcccCCCccccccccccccce------------eEEEecccC-----CCCC-----CCCHHH
Q 013217 108 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLD-----ESTG-----LVDYDM 160 (447)
Q Consensus 108 ----~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~-----~~~~-----~id~~~ 160 (447)
.++ .+|+..+-.|.|... + .+.++|.. +...+++.. +... ....++
T Consensus 176 ~~~g~~~r~~iI~~~~~yHG~t~-~------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 248 (504)
T PLN02760 176 NALGRPNKKKFIARSKSYHGSTL-I------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADN 248 (504)
T ss_pred HhcCCCCCcEEEEECCCccCChH-h------hhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHH
Confidence 233 578877755433311 0 11111110 111121110 0000 011245
Q ss_pred HHHHhhh---hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhh-hccccccccCCCCCC-cccEEEeC
Q 013217 161 LEKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTT 229 (447)
Q Consensus 161 l~~~~~~---~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~-~~g~~~~~~~~~~~~-~~Di~~~s 229 (447)
+++++.. .++.+|++.+. ...+ ..+ +++|+++|++||+++|+|++| ..|-+....-..-++ ..|+++++
T Consensus 249 le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg 328 (504)
T PLN02760 249 LENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLA 328 (504)
T ss_pred HHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEec
Confidence 7766642 23556776532 1223 445 899999999999999999998 344333211000011 26887775
Q ss_pred CCcccCCC--CCceEEeecCCcchhhHHHHhhhc-------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 230 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 230 ~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~-------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
|.|+|. +.|.+++++ ++.+.+... ...+++++ ++..+++..++++.+.+++ ..+++.+.
T Consensus 329 --K~lggG~~PigAv~~~~------~i~d~~~~~~~~~~~~~h~~T~~g-nPl~~Aaala~Le~i~~~~---l~~~~~~~ 396 (504)
T PLN02760 329 --KALSSAYMPIGAVLVSP------EISDVIHSQSNKLGSFAHGFTYSG-HPVSCAVALEALKIYKERN---IPEHVNKI 396 (504)
T ss_pred --ccccCCccccceEeecH------HHHhhhhcccccccCcccCCCCCC-CHHHHHHHHHHHHHHHhCC---HHHHHHHH
Confidence 999652 345577776 677766431 11223333 4555555556777776543 46777777
Q ss_pred HHHHHHHHHHC-CcEeeeC--CCCCeeEEecCCCC-C----C--C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeE
Q 013217 301 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-G----I--D---GARVEKILDMASITLNKNSVPGDKSALVPGGI 367 (447)
Q Consensus 301 ~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~-~----~--~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 367 (447)
.++|.+.|++. ...++.. +.. .+.-+.+... . . + ...+.+.|.++||.+... ...+
T Consensus 397 g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~l 465 (504)
T PLN02760 397 APRFQDGIKAFSGSPIIGEIRGTG-LILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------GDNI 465 (504)
T ss_pred HHHHHHHHHHHhcCCCeeeEEeCc-eEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----------CCEE
Confidence 78888777652 1122211 111 1222233211 1 0 0 334667778899998531 2379
Q ss_pred EEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 368 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 368 Rig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
|++++...| ++|++++.+++++++...
T Consensus 466 rl~Ppl~it----~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 466 MMSPPLIIT----PEEVDELISIYGKALKAT 492 (504)
T ss_pred EEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 999887777 999999999999988754
No 310
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=1.4e-11 Score=123.67 Aligned_cols=330 Identities=15% Similarity=0.069 Sum_probs=177.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-.|.|.+++.+.+.+ +..+..+.. ..+...+ ..+++++++.-..+ ..+..+||++|+.+++... ...
T Consensus 60 ~~p~v~~a~~~q~~~-~~~~~~~~~---~~~~~~~----la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~tg 128 (433)
T PRK08117 60 RHPKVVQAIKEQADK-LMHGPSGVI---YYESILK----LAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVTK 128 (433)
T ss_pred CCHHHHHHHHHHHHh-ccCcccccc---CCHHHHH----HHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 468999998887754 222221211 1122222 33577777732222 1234589999999988743 222
Q ss_pred CCEEEEecCCC-CcccCC---Cc--ccccccc-ccccceeEEEecccC---CCCC------CCCHHHHHHHhhh----hC
Q 013217 110 HDRIMGLDLPH-GGHLSH---GF--MTPKRRV-SGTSIYFESMPYRLD---ESTG------LVDYDMLEKTAIL----FR 169 (447)
Q Consensus 110 gd~Vl~~~~~~-~~~~~~---~~--~~~~~~~-~~~g~~~~~~~~~~~---~~~~------~id~~~l~~~~~~----~~ 169 (447)
..+|+...-.| |.+... .. ....... ... ..+..++++.. +... .-|+++++++++. .+
T Consensus 129 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 207 (433)
T PRK08117 129 RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLL-GSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE 207 (433)
T ss_pred CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCC-CCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence 35677766443 322110 00 0000000 000 00122222210 0000 0256777777643 24
Q ss_pred CcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC-CCCC
Q 013217 170 PKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRG 239 (447)
Q Consensus 170 ~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~-Gp~g 239 (447)
+.+|++.+- ...+ ..+ +++++++|++||+++|+|++|. |+...+.. . ..++ ..|++ +++|.++ |.+.
T Consensus 208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi~--t~sK~lg~G~pi 284 (433)
T PRK08117 208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDIM--TIAKGIASGLPL 284 (433)
T ss_pred EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCEe--ehhhhccCCCcc
Confidence 566776521 1222 445 8999999999999999999985 65333321 1 0111 24664 6669985 5566
Q ss_pred ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC--cEeee
Q 013217 240 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS 317 (447)
Q Consensus 240 G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~ 317 (447)
|+++.++ ++.+.+......++. +.+...+++..++++.+..++ ..+++.++.+++.+.|.+.. +.++.
T Consensus 285 gav~~~~------~i~~~~~~~~~~~T~-~~np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~ 354 (433)
T PRK08117 285 SAVVASK------ELMEQWPLGSHGTTF-GGNPVACAAALATLEVIKEEK---LLDNANEMGAYALERLEVLKEKHPVIG 354 (433)
T ss_pred eeEEEcH------HHHhhccCCCCCCCC-CcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 8888887 676665433222222 235555666666777665433 45666667777777776531 22221
Q ss_pred --CCCCCeeEEecCCCC-----CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 318 --GGSDNHLVLVDLRPM-----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 318 --~~~~~~~~~v~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
.+. ..+..+.+... ......+.+.|.++||.+... +. ....+|+.++..++ ++|++++++.
T Consensus 355 ~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~----~~~~lRl~p~~~~t----~~~i~~~~~~ 422 (433)
T PRK08117 355 DVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC---GN----AGNVLRMIPPLTVT----KEEIDEGLDI 422 (433)
T ss_pred eeecC-CcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec---CC----CCCEEEEeCCccCC----HHHHHHHHHH
Confidence 111 12223344221 111345667788899987431 11 13589999888777 9999999999
Q ss_pred HHHHHHHH
Q 013217 391 IHEGVEIT 398 (447)
Q Consensus 391 i~~~l~~~ 398 (447)
|.+++...
T Consensus 423 l~~~l~~~ 430 (433)
T PRK08117 423 LDEALTEY 430 (433)
T ss_pred HHHHHHHH
Confidence 99988643
No 311
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.53 E-value=1.8e-11 Score=122.54 Aligned_cols=331 Identities=15% Similarity=0.029 Sum_probs=174.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-+|.+.+++.+.+.+. . +.....+ +.+ ..+ +. .+++.+..+.+... -.+.++||++|+..++... ...
T Consensus 58 ~~~~i~~a~~~~~~~~-~--~~~~~~~-~~~--~~~-~l-a~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~ 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKKL-S--HTCFQVL-AYE--PYL-EL-CEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (425)
T ss_pred CCHHHHHHHHHHHhhC-C--Ccccccc-CCH--HHH-HH-HHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence 3788888888877642 1 1111000 111 112 12 24566666543211 1345699999888776543 223
Q ss_pred CCEEEEecCCCCcccCCCccccccccc-ccc-----ceeEEEecccCCCCCCC--CHHHHHHHhh----hhCCcEEEEcC
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVS-GTS-----IYFESMPYRLDESTGLV--DYDMLEKTAI----LFRPKLIIAGA 177 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g-----~~~~~~~~~~~~~~~~i--d~~~l~~~~~----~~~~klii~~~ 177 (447)
..+|++.++.|.|.............. ..+ ..+..++++.+..+... +++++++++. ..++.+|++.+
T Consensus 128 r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep 207 (425)
T PRK08088 128 RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP 207 (425)
T ss_pred CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence 456777777654442100000000000 000 00111222222111111 1556888775 23456777763
Q ss_pred C-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCcccC-CCCCceEEeecCC
Q 013217 178 S-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLR-GPRGGMIFFKKDP 248 (447)
Q Consensus 178 ~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l~-Gp~gG~i~~~~~~ 248 (447)
. ++++ ..+ +++|.++|+++|+++|+|+++. |+...+.. ..+. +.+.-+.|++|.++ |.|.|++++++
T Consensus 208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~-- 283 (425)
T PRK08088 208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTFAKSIAGGFPLAGVTGRA-- 283 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEEeccccCCCcceeeEecH--
Confidence 2 3333 233 7899999999999999999975 54322211 1111 11222456679984 66779999987
Q ss_pred cchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CCc-EeeeCCCCCe
Q 013217 249 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY-KLVSGGSDNH 323 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~~~~~~~ 323 (447)
++.+.+.........+ .+....++....++....+. ..+++.+..+++.+.|.+ .+. ..+.+ . ..
T Consensus 284 ----~~~~~~~~~~~~~t~~-~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g-~-G~ 353 (425)
T PRK08088 284 ----EVMDAIAPGGLGGTYA-GNPIACAAALAVLKVFEQEN---LLQKANALGEKLKDGLLAIAEKHPEIGDVRG-L-GA 353 (425)
T ss_pred ----HHHhhcCCCCCCCCCC-cCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEec-c-ce
Confidence 6777765543332333 34444555555666554333 344444444444444433 222 12222 2 34
Q ss_pred eEEecCCCC-------CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 324 LVLVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 324 ~~~v~~~~~-------~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+.|+.+... ......+.+.+.+.||.+. |... .++.||++++...+ ++|+++.++.|.+++.
T Consensus 354 ~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~----~~~~---~~~~iRl~~~~~~t----~~ei~~~i~~l~~~l~ 422 (425)
T PRK08088 354 MIAIELFEDGDHSKPNAKLTAQIVARARDKGLILL----SCGP---YYNVLRILVPLTIE----DAQIRQGLEIIAQCFD 422 (425)
T ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEe----cCCC---CCCEEEEECCCCcC----HHHHHHHHHHHHHHHH
Confidence 466666211 1124567777888998873 2211 13589999887666 9999999999998886
Q ss_pred H
Q 013217 397 I 397 (447)
Q Consensus 397 ~ 397 (447)
.
T Consensus 423 ~ 423 (425)
T PRK08088 423 E 423 (425)
T ss_pred h
Confidence 4
No 312
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.53 E-value=3.2e-11 Score=120.79 Aligned_cols=330 Identities=16% Similarity=0.111 Sum_probs=173.8
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
...|.|.+++.+.+.+ ...+.. +....+ .+....+++.+++....+. ....+||++|+.+++....
T Consensus 62 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~----~~~~la~~l~~~~p~~~~~---v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 62 HGRPEIVEAVRAQAGE-LDYAPA---FQMGHP----KAFELANRIAEIAPGGLNH---VFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---CCcCCH----HHHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 3478999998877754 111111 001111 1112335677776322121 2346899999998876432
Q ss_pred ----CC-CCEEEEecCCCCcccCC-----CccccccccccccceeEEEecccCCCC--CCC--------CHHHHHHHhhh
Q 013217 108 ----KP-HDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDEST--GLV--------DYDMLEKTAIL 167 (447)
Q Consensus 108 ----~p-gd~Vl~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~i--------d~~~l~~~~~~ 167 (447)
++ ..+|+...-.|.|.-.- +....+.........+..++++.+... +.. ..+++++++..
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTL 210 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHh
Confidence 12 35788887665443100 000000000000001122232211000 000 24577777753
Q ss_pred h---CCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhh-ccccccccCCCCCC-cccEEEeCCCcccCC
Q 013217 168 F---RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTTTHKSLRG 236 (447)
Q Consensus 168 ~---~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~-~g~~~~~~~~~~~~-~~Di~~~s~~K~l~G 236 (447)
. ++.+|++.+. ...+ ..+ +++|+++|++||+++|+|++|. .|-........-.+ ..|++++ .|.|.|
T Consensus 211 ~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~--gK~l~g 288 (442)
T PRK13360 211 HDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTC--AKGLTN 288 (442)
T ss_pred cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeee--eecccc
Confidence 2 3456666521 1122 445 8999999999999999999983 33222211000111 2588865 599964
Q ss_pred C--CCceEEeecCCcchhhHHHHhhhc-------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 013217 237 P--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 307 (447)
Q Consensus 237 p--~gG~i~~~~~~~~~~~~~~~i~~~-------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (447)
. +.|.+++++ ++.+.+... ...++.+ .+...+++..++++.+.+++ +.++..++.++|.+.
T Consensus 289 G~~P~gav~~~~------~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~ 358 (442)
T PRK13360 289 GAIPMGAVFVSS------EIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYEREG---LLTRAARLAPYWEDA 358 (442)
T ss_pred CccceEEEEEcH------HHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHH
Confidence 2 345566666 666655421 1122223 35555666666788776544 456677777788887
Q ss_pred HHHCC-cEeeeCCCCC-eeEEecCCCC--C--CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCH
Q 013217 308 LVELG-YKLVSGGSDN-HLVLVDLRPM--G--IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 381 (447)
Q Consensus 308 L~~~g-~~~~~~~~~~-~~~~v~~~~~--~--~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~ 381 (447)
|++.. +..+.+-... .+.-+.+.+. + .....+.+.|.++||.+... .+.+|++++...| +
T Consensus 359 l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------~~~lr~~Ppl~~t----~ 424 (442)
T PRK13360 359 LHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----------GDILALSPPLIIE----E 424 (442)
T ss_pred HHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec----------CCEEEEeCCCccC----H
Confidence 77632 2222110001 1111222211 1 12345667788899998531 2479999888777 9
Q ss_pred HHHHHHHHHHHHHHHH
Q 013217 382 KEFVAIADFIHEGVEI 397 (447)
Q Consensus 382 ~di~~l~~~i~~~l~~ 397 (447)
+|++++.+++.++++.
T Consensus 425 ~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 425 AQIDELFDILAQALKE 440 (442)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998863
No 313
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=3.3e-12 Score=119.16 Aligned_cols=324 Identities=18% Similarity=0.224 Sum_probs=196.7
Q ss_pred cCeeEe-------cCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC-----CCccce
Q 013217 21 KSLELI-------ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-----ENKWGV 88 (447)
Q Consensus 21 ~~i~l~-------~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~-----~~~~~~ 88 (447)
+.+||- .+..++=++|.+|-...+.....-. |.+....+.+.+. ..+-+||.+ ...+ +
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~------Yl~i~G~~~f~~~---~~~llFG~d~~~l~~~Rv-~ 96 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKN------YLPIEGLPEFLEA---VQKLLFGADSPALAEDRV-A 96 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccc------cCCcCCcHHHHHH---HHHHhcCCCcHHHHhhhH-h
Confidence 556764 2333556888888766665543222 3333334444432 233468855 2223 5
Q ss_pred eeecCCcHHHHHHHHHHh--cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecc-cCCCCCCCCHHHHHHHh
Q 013217 89 NVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDESTGLVDYDMLEKTA 165 (447)
Q Consensus 89 ~v~~~sGs~a~~~~~~al--~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~id~~~l~~~~ 165 (447)
.+|..+||.|+..+..-+ ..|..+|.+++|..+-|.. .....| +++..|+ .|.++..+|++.+.+.+
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aG--l~v~~Y~Yyd~~~~~~df~~mla~L 166 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAG--LEVETYPYYDAETKGLDFDGMLADL 166 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcC--CceeeeeccccccccccHHHHHHHH
Confidence 688899998887665444 5677789999999887732 223444 4444444 35566779999998877
Q ss_pred hhhC-CcEEEEc-CCCCCC-C----CChHHHHHHHHHhCCEEEEehhhhccccccccCC--CCCC-----cc-cEEEeCC
Q 013217 166 ILFR-PKLIIAG-ASAYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-----YC-DVVTTTT 230 (447)
Q Consensus 166 ~~~~-~klii~~-~~~~~~-~----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~--~~~~-----~~-Di~~~s~ 230 (447)
+... -.+|++. ..+||+ . ..+++|.++.++.|.+.++|.|+ -|+-.. +.. .++. +. -++++|+
T Consensus 167 ~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AY-QGF~~G-leeDa~~lR~~a~~~~~~lva~S~ 244 (396)
T COG1448 167 KTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY-QGFADG-LEEDAYALRLFAEVGPELLVASSF 244 (396)
T ss_pred HhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhh-hhhccc-hHHHHHHHHHHHHhCCcEEEEehh
Confidence 6532 2455554 456665 2 23678999999999999999983 553222 111 1110 11 3788999
Q ss_pred Cccc--CCCCCceE-EeecCCcchhhHHHHhhhc---cCCCCCCCCcHHHHHHHHHH-----HHHhcChhHHHHHHHHHH
Q 013217 231 HKSL--RGPRGGMI-FFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVC-----LKHAQSPEFKVYQNKVVS 299 (447)
Q Consensus 231 ~K~l--~Gp~gG~i-~~~~~~~~~~~~~~~i~~~---~~~~~~g~p~~~~~aal~~a-----l~~~~~~~~~~~~~~~~~ 299 (447)
+|.| .|-|.|.+ ++.+.. +...++... ...+.+++|..+...-.+.- |+..-..+..++++++.+
T Consensus 245 SKnfgLYgERVGa~~vva~~~----~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~ 320 (396)
T COG1448 245 SKNFGLYGERVGALSVVAEDA----EEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILE 320 (396)
T ss_pred hhhhhhhhhccceeEEEeCCH----HHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9986 47777543 333321 333333221 12234566666654444332 222222345678889999
Q ss_pred HHHHHHHHHHHCC----cEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccc
Q 013217 300 NCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 375 (447)
Q Consensus 300 ~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~ 375 (447)
.++.|.+.|++.+ |..+.. ... ++.+ .|++.+++.+..+++||.+-. ++ ||+...
T Consensus 321 mR~~lv~~L~~~~~~~~f~~i~~--Q~G--MFsy--~Gls~~QV~rLree~~IY~v~------------sG-Ri~vaG-- 379 (396)
T COG1448 321 MRQALVDALKALGAPRNFDFIIS--QRG--MFSY--TGLSPEQVDRLREEFGIYLVA------------SG-RINVAG-- 379 (396)
T ss_pred HHHHHHHHHHhhCCCcccchHhh--cCc--eeec--CCCCHHHHHHHHHhccEEEec------------CC-eeeecc--
Confidence 9999999998833 444432 122 2333 277899999999999999842 22 776654
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 013217 376 TRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 376 ~~g~~~~di~~l~~~i~~~ 394 (447)
+++..|+++++.|.++
T Consensus 380 ---l~~~ni~~va~ai~~v 395 (396)
T COG1448 380 ---LNTSNIDYVAKAIAAV 395 (396)
T ss_pred ---CChhhHHHHHHHHHhh
Confidence 4478999999999875
No 314
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.52 E-value=3e-11 Score=120.50 Aligned_cols=328 Identities=13% Similarity=0.100 Sum_probs=174.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcHHHHHHHHHHhc--C
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAIL--K 108 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs~a~~~~~~al~--~ 108 (447)
-.|.+.+++...+... . +.....+. .+ ..+ ...+++.+++... .+. .+..+||++|+.+++.... .
T Consensus 57 ~~p~v~~ai~~ql~~~-~--~~~~~~~~-~~--~~~--~la~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK09792 57 RHPDLVAAVEQQLQQF-T--HTAYQIVP-YE--SYV--TLAEKINALAPVSGQAK---TAFFTTGAEAVENAVKIARAHT 125 (421)
T ss_pred CCHHHHHHHHHHHHhc-c--CcccCccC-CH--HHH--HHHHHHHHhCCCCCCce---EEEeCChHHHHHHHHHHHHHhc
Confidence 4788888888777642 1 11111011 11 111 1224566665422 111 2335799999998876442 2
Q ss_pred CCCEEEEecCCCCcccCCCcc------ccccccccccceeEEEecccCCCCCC---CCHHHHHHHhhh----hCCcEEEE
Q 013217 109 PHDRIMGLDLPHGGHLSHGFM------TPKRRVSGTSIYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLIIA 175 (447)
Q Consensus 109 pgd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~---id~~~l~~~~~~----~~~klii~ 175 (447)
...+|+...-.|.|.-..... .........-..+..++++.+. .+. -|++++++.+.+ .++.+|++
T Consensus 126 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~iaavi~ 204 (421)
T PRK09792 126 GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAKQVAAIIF 204 (421)
T ss_pred CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 335788877655443100000 0000000000012233443321 111 235788887762 35678888
Q ss_pred cCCCCCC---CCC---hHHHHHHHHHhCCEEEEehhhhccccccccCCCC---CC-cccEEEeCCCcccC-CCCCceEEe
Q 013217 176 GASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCDVVTTTTHKSLR-GPRGGMIFF 244 (447)
Q Consensus 176 ~~~~~~~---~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~---~~-~~Di~~~s~~K~l~-Gp~gG~i~~ 244 (447)
.+..+++ ..+ +++|.++|++||+++|+|+++ .|+...+.. .. ++ ..|++++ .|+|+ |.+.|++++
T Consensus 205 EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~-~a~~~~~~~pDi~t~--gK~l~~G~pigav~~ 280 (421)
T PRK09792 205 EPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQ-SGFARTGKL-FAMDHYADKPDLMTM--AKSLAGGMPLSGVVG 280 (421)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCch-hHHHhcCCCCcEEEe--ehhhcCCCceEEEEE
Confidence 7544332 335 789999999999999999996 444333311 11 11 3576555 59985 566788888
Q ss_pred ecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeeeCCCC-
Q 013217 245 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSD- 321 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~- 321 (447)
++ ++.+.+......++.+ .+....++..+.++.+.+.. ..+++.+..+++.+.|++. .+..+.....
T Consensus 281 ~~------~i~~~~~~~~~~~T~~-gnpl~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~ 350 (421)
T PRK09792 281 NA------NIMDAPAPGGLGGTYA-GNPLAVAAAHAVLNIIDKES---LCERANQLGQRLKNTLIDAKESVPAIAAVRGL 350 (421)
T ss_pred cH------HHHhccCCCCcCCCCC-CCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhCCCcceeccc
Confidence 87 6776665432222333 23344444444666655433 3444555555555555431 1211211111
Q ss_pred CeeEEecCCCCC------CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMG------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 322 ~~~~~v~~~~~~------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
..+.++.+.... .....+.+.+.++||.+... + + .+..||+.++...+ ++|+++++++|.+++
T Consensus 351 Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g---~-~~~~irl~P~l~i~----~~ei~~~~~~l~~~l 419 (421)
T PRK09792 351 GSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---G---A-YGNVIRFLYPLTIP----DAQFDAAMKILQDAL 419 (421)
T ss_pred ceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec---C---C-CCCEEEEeCCCcCC----HHHHHHHHHHHHHHH
Confidence 344566664321 12355677778899998421 1 1 13589999887566 999999999998887
Q ss_pred H
Q 013217 396 E 396 (447)
Q Consensus 396 ~ 396 (447)
.
T Consensus 420 ~ 420 (421)
T PRK09792 420 S 420 (421)
T ss_pred h
Confidence 4
No 315
>PRK12403 putative aminotransferase; Provisional
Probab=99.52 E-value=3.1e-11 Score=121.52 Aligned_cols=322 Identities=17% Similarity=0.142 Sum_probs=167.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCccc-CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~-~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
-.|.|.+++.+.+.+ +..+. .++ ...+...+++ ++++++++...+ -.+..+||++|+.+++....
T Consensus 71 ~hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~~~la----e~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~~ 139 (460)
T PRK12403 71 GRKDLAAAAARQMEQ-LPYYN---MFFHTTHPAVIELS----ELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRYW 139 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCee---cccccCCHHHHHHH----HHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 369999998887764 22111 111 1122223333 567777763322 12446999999999887653
Q ss_pred ----CCCCEEE-EecCC-CCcccCCCccccccccccccce-----------eEEEecccC-CCCCC--------CCHHHH
Q 013217 108 ----KPHDRIM-GLDLP-HGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD-ESTGL--------VDYDML 161 (447)
Q Consensus 108 ----~pgd~Vl-~~~~~-~~~~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~-~~~~~--------id~~~l 161 (447)
+++..++ ...-. ||..+. .+++++.. +..++++.. ...+. .+.+++
T Consensus 140 ~~~g~~~r~~ii~~~~~yHG~t~~--------~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (460)
T PRK12403 140 QVLGKPQKKIMIGRWNGYHGSTLA--------ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQL 211 (460)
T ss_pred HhhCCCCCcEEEEECCCcCcccHh--------hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 2444443 33333 332211 11111110 111221110 00000 113556
Q ss_pred HHHhhh---hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeC
Q 013217 162 EKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTT 229 (447)
Q Consensus 162 ~~~~~~---~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s 229 (447)
++.+.+ .++.+||+.+- ...+ ..+ +++++++|++||+++|+|++| .|+--.|.. . ..++ ..|++++
T Consensus 212 e~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGRtG~~~a~e~~gv~PDiv~~- 289 (460)
T PRK12403 212 EEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI-GGFGRTGEWFAHEHFGFEPDTLSI- 289 (460)
T ss_pred HHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhhhhhcCCCCCeEEE-
Confidence 655532 23456666521 2223 344 899999999999999999998 443222210 1 1111 2588874
Q ss_pred CCcccCCC--CCceEEeecCCcchhhHHHHhhhc--cC-CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHH-HHHHH
Q 013217 230 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA--VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNCRA 303 (447)
Q Consensus 230 ~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~--~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~-~~~~~ 303 (447)
.|.|+|. +.|.+++++ ++.+.+... .+ .+.+-+.++..+++..++|+.+.+++ +.+++. ++.++
T Consensus 290 -gK~lggG~~Piga~v~~~------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~ 359 (460)
T PRK12403 290 -AKGLTSGYVPMGGLVLSK------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPY 359 (460)
T ss_pred -cccccccccceEEEEECH------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHH
Confidence 5998643 345555666 666655321 11 11111235555666666787776544 355664 66777
Q ss_pred HHHHHHHC--CcEeeeCCCC-CeeEEecCCCCC-----CC-----HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEe
Q 013217 304 LASRLVEL--GYKLVSGGSD-NHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIG 370 (447)
Q Consensus 304 l~~~L~~~--g~~~~~~~~~-~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig 370 (447)
|.+.|++. ...++..-.. ..+.-+.+.... .. ...+...+.+.|+.+... .+.+|+.
T Consensus 360 l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~~~l~ 429 (460)
T PRK12403 360 LQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----------LGRMIMA 429 (460)
T ss_pred HHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----------CCEEEEE
Confidence 77777541 2222221011 112223332110 01 123445567899998521 1358998
Q ss_pred cCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 371 SPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 371 ~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
++...| ++|++++.+++++++...
T Consensus 430 Ppl~it----~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 430 PALVAG----RAEIDELVDKTRIAVDRT 453 (460)
T ss_pred CCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 776666 999999999999999754
No 316
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.52 E-value=5.3e-11 Score=116.32 Aligned_cols=329 Identities=17% Similarity=0.089 Sum_probs=177.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
..|.|.+|+.+.+..-. +...++......++. .+++.+++..+... -....+||++||.+++... ...
T Consensus 73 ~hP~Vv~Av~~q~~~~~---h~~~~~~~~e~~v~~-----ae~L~~~~p~~~~~--~~~f~~sGaeA~E~AiKiAr~~Tg 142 (447)
T COG0160 73 NHPRVVEAVKRQLAKLN---HTHTRDLYYEPYVEL-----AEKLTALAPGSGLK--KVFFGNSGAEAVEAAIKIARAYTG 142 (447)
T ss_pred CCHHHHHHHHHHHHHhh---cccCCcccchhHHHH-----HHHHHHhCCcccCC--eEEecCCcHHHHHHHHHHHHHHhC
Confidence 37999999888765421 111122111111222 24566655542111 2345699999999988643 223
Q ss_pred CCEEEEecCCCCcccCCCccccc--cccc-----cccceeEEEecccCCCC-C--------CCCHHHHHHHhhh-----h
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPK--RRVS-----GTSIYFESMPYRLDEST-G--------LVDYDMLEKTAIL-----F 168 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~--~~~~-----~~g~~~~~~~~~~~~~~-~--------~id~~~l~~~~~~-----~ 168 (447)
+..|+.+.-.|.|.- .+....+ +... -....+..+||+..... + .-..+.++..+.. .
T Consensus 143 r~~viaf~~afHG~T-~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~ 221 (447)
T COG0160 143 RPGVIAFDGAFHGRT-LGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPE 221 (447)
T ss_pred CCcEEEECCcccccc-hhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCC
Confidence 467887776654431 1100000 0000 00011233444432111 1 1123344553332 2
Q ss_pred CCcEEEEcCC-CCCC-CC-C---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----cccEEEeCCCcccCC-C
Q 013217 169 RPKLIIAGAS-AYPR-DF-D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLRG-P 237 (447)
Q Consensus 169 ~~klii~~~~-~~~~-~~-~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----~~Di~~~s~~K~l~G-p 237 (447)
++.++|+.+- ..++ .. + ++++.++|++||+++|+|++| .|+--.|. .+.+. ..|++|+| |.++| .
T Consensus 222 ~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQ-tG~GRTG~-~fa~E~~gv~PDivt~a--K~ig~G~ 297 (447)
T COG0160 222 EVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ-TGFGRTGK-MFAFEHFGVEPDIVTLA--KSLGGGL 297 (447)
T ss_pred ceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcccc-chhhhhcCCCCCEEEec--ccccCCC
Confidence 4667777632 2223 22 2 589999999999999999999 55544442 11222 36999988 99864 4
Q ss_pred CCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEe
Q 013217 238 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKL 315 (447)
Q Consensus 238 ~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~ 315 (447)
+.|.++.++ ++.+ .......++.++ |...+++..+.|+.+.++ .+.++..+.-++|.++|.+ ..+++
T Consensus 298 Pl~avv~r~------ei~~-~~~g~~~~Tf~G-Npva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~ 366 (447)
T COG0160 298 PLSAVVGRA------EIMD-WPPGGHGGTFGG-NPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPL 366 (447)
T ss_pred ceeEEeccH------Hhcc-cCCcccCCCCCc-CHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 458888887 5655 333333333333 444444444466665544 3466666777777777765 23334
Q ss_pred eeCCCCCee-EEecCCCC----CCC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 316 VSGGSDNHL-VLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 316 ~~~~~~~~~-~~v~~~~~----~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
+.+-...-+ .-+.+... .-+ ...+.+.+.++|+.+..+. ...+.|||.+|..-+ ++++++.
T Consensus 367 IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G-------~~~nviRi~PPL~is----~e~~d~~ 435 (447)
T COG0160 367 IGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG-------PHGNVLRILPPLTIS----DEELDEG 435 (447)
T ss_pred eecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC-------CCCcEEEEeCCcccC----HHHHHHH
Confidence 443111112 22333211 012 2456777788998775421 124589999886666 9999999
Q ss_pred HHHHHHHHHH
Q 013217 388 ADFIHEGVEI 397 (447)
Q Consensus 388 ~~~i~~~l~~ 397 (447)
.++|.+++..
T Consensus 436 l~il~~al~~ 445 (447)
T COG0160 436 LDILEEALKE 445 (447)
T ss_pred HHHHHHHHHh
Confidence 9999998874
No 317
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.52 E-value=2.1e-11 Score=122.37 Aligned_cols=323 Identities=15% Similarity=0.108 Sum_probs=177.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+|+.+.+..- . +.. +++. .+ ......+++.+++..+.+. ...++||++|+.+++....
T Consensus 99 ~~p~v~~Ai~~ql~~l-~--~~~-~~~~-~~----~~~~lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~t~ 166 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQ-P--LHS-QELL-DP----LRAMLAKTLAALTPGKLKY---SFFCNSGTESVEAALKLAKAYQS 166 (459)
T ss_pred CCHHHHHHHHHHHhhC-c--ccc-cccC-CH----HHHHHHHHHHHhCCCCCCE---EEEeCCchHHHHHHHHHHHHHhc
Confidence 3689999988877542 1 111 1111 11 1212234666665432221 2335899999998876432
Q ss_pred CCC-CEEEEecCCCCcccCCCccccccccccccce-eEEEecccCCCC---CCCCHHHHHHHhhh-----hCCcEEEEcC
Q 013217 108 KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAGA 177 (447)
Q Consensus 108 ~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~id~~~l~~~~~~-----~~~klii~~~ 177 (447)
+.| .+|+...-.|.|.-. + .+..++.. +..-..+..+.. ...|.++++++++. .++.+|++.+
T Consensus 167 ~~gr~~ii~~~~~yHG~t~-~------~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEp 239 (459)
T PRK11522 167 PRGKFTFIATSGAFHGKSL-G------ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEP 239 (459)
T ss_pred cCCCcEEEEecCCCCCCcH-H------HhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEec
Confidence 122 367777655433210 0 11111110 000000000000 12377888887753 1344666652
Q ss_pred C-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCCC--CCceEEeec
Q 013217 178 S-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFKK 246 (447)
Q Consensus 178 ~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~Gp--~gG~i~~~~ 246 (447)
- ...+ ..+ ++++.++|++||+++|+|++| .|+-..|.. . .-.+ ..|++++ .|.|+|. +.|.+++++
T Consensus 240 v~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~-tG~GRtG~~~a~e~~gv~PDivt~--gK~lggG~~Pigav~~~~ 316 (459)
T PRK11522 240 IQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ-TGMGRTGKMFACEHENVQPDILCL--AKALGGGVMPIGATIATE 316 (459)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce-ecCCccchhhhhhccCCCCCEEEe--chhhhCCCccceeEEEcH
Confidence 1 2223 344 799999999999999999998 454222211 1 0011 2588865 5999652 345555655
Q ss_pred CCcchhhHHHHhhhc--cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcE-eeeCCC-
Q 013217 247 DPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVSGGS- 320 (447)
Q Consensus 247 ~~~~~~~~~~~i~~~--~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~- 320 (447)
++.+.+... .+.++.++ ++..+++..++++.+.+++ ..+++.+..++|.+.|++. .+. ++..-.
T Consensus 317 ------~i~~~~~~~~~~~~~T~~g-np~~~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG 386 (459)
T PRK11522 317 ------EVFSVLFDNPFLHTTTFGG-NPLACAAALATINVLLEQN---LPAQAEQKGDYLLDGFRQLAREYPDLVQEARG 386 (459)
T ss_pred ------HHHHHhccCCcccCCCCCC-CHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEe
Confidence 565554321 11122222 4555555556788776544 4677778888888888763 232 221100
Q ss_pred CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 321 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 321 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
...+.-+.+.... ....+.+.|.++||.+... . .....+|+.++...+ ++|++++++++.+++...
T Consensus 387 ~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~-~------~~~~~lr~~Ppl~~t----~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 387 KGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGT-L------NNAKTIRIEPPLTLT----IEQCEQVLKAARKALAAM 452 (459)
T ss_pred ceeEEEEEecCch-HHHHHHHHHHHCCeEEEec-C------CCCCEEEEECCccCC----HHHHHHHHHHHHHHHHHH
Confidence 1223334444321 2456778888899998532 1 123589999887777 999999999999998754
No 318
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.51 E-value=5.9e-11 Score=118.89 Aligned_cols=330 Identities=16% Similarity=0.059 Sum_probs=176.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-.|.|.+++.+.+.+.. +....++. .+. .+ ...+++.+++....+. ...++||++|+.+++... ...
T Consensus 58 ~~p~v~~Ai~~ql~~~~---~~~~~~~~-~~~--~~--~la~~L~~~~p~~~~~---v~f~~sGsEAve~AlklAr~~tg 126 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLI---HYTPIYGF-PVE--PL--LLAEKLIEIAPGDNPK---VSFGLSGSDANDGAIKFARAYTK 126 (443)
T ss_pred CCHHHHHHHHHHHHhcc---CccccccC-cHH--HH--HHHHHHHHhCCCCCCE---EEEcCCHHHHHHHHHHHHHHhcC
Confidence 37889998888776521 11111111 111 11 2234666766543221 234689999999887643 223
Q ss_pred CCEEEEecCCCCccc-CCCcccccc-cc-cccc--ceeEEEecccCCC-CC--------CCCHHHHHHHhhh----hCCc
Q 013217 110 HDRIMGLDLPHGGHL-SHGFMTPKR-RV-SGTS--IYFESMPYRLDES-TG--------LVDYDMLEKTAIL----FRPK 171 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~-~~~~~~~~~-~~-~~~g--~~~~~~~~~~~~~-~~--------~id~~~l~~~~~~----~~~k 171 (447)
..+|+...-.|.|.- ......... .. ...+ ..+..++++.... .+ .-+.+.+++.+.. .+++
T Consensus 127 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA 206 (443)
T PRK08360 127 RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVA 206 (443)
T ss_pred CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeE
Confidence 457777664443321 000000000 00 0000 0112223221000 00 0234456666642 3678
Q ss_pred EEEEcCCCCC-C-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-CC-CCC-cccEEEeCCCcccC-CCCCce
Q 013217 172 LIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSLR-GPRGGM 241 (447)
Q Consensus 172 lii~~~~~~~-~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~-~~~-~~Di~~~s~~K~l~-Gp~gG~ 241 (447)
+|++.+..++ + ..+ +++|.++|++||+++|+|++|. |+...+.. .. ..+ ..|++++ +|.++ |.+.|+
T Consensus 207 Avi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiitl--sK~l~~G~piga 283 (443)
T PRK08360 207 ALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITL--GKPLGGGLPISA 283 (443)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEEe--cccccCCceeEE
Confidence 8888743233 2 222 7899999999999999999974 54333321 10 111 2577755 79984 567799
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeeeCC
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGG 319 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~ 319 (447)
+++++ ++.+.+.......+.++ +....++..++++.+.+++ ..+++.+..++|.+.|++. ...++..-
T Consensus 284 v~~~~------~i~~~~~~~~~~~T~~~-~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~v 353 (443)
T PRK08360 284 TIGRA------EIMDSLPPLAHAFTLSG-NPVASAAALAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIGDV 353 (443)
T ss_pred EEEcH------HHHhhhcCCCCCCCCCc-CHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCeeee
Confidence 99887 67776654322222232 3333555555777765443 4566666777777777552 22222211
Q ss_pred C-CCeeEEecCCCCC----C---CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 320 S-DNHLVLVDLRPMG----I---DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 320 ~-~~~~~~v~~~~~~----~---~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
. ...++-+.+.... - ....+...|.++||.+... ....+|+.++..++ ++|++++.+++
T Consensus 354 rg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------~~~~lr~~P~l~~t----~~~id~~~~~l 420 (443)
T PRK08360 354 RGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF---------SGNVLRIQPPLTIE----KEVLDEGLDIL 420 (443)
T ss_pred eccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCCCC----HHHHHHHHHHH
Confidence 1 1112223332110 0 1235667788899998531 13579999888777 99999999999
Q ss_pred HHHHHHH
Q 013217 392 HEGVEIT 398 (447)
Q Consensus 392 ~~~l~~~ 398 (447)
.+++...
T Consensus 421 ~~~l~~~ 427 (443)
T PRK08360 421 EEAIEDV 427 (443)
T ss_pred HHHHHHH
Confidence 9999754
No 319
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.50 E-value=3.3e-11 Score=117.33 Aligned_cols=305 Identities=14% Similarity=0.115 Sum_probs=171.9
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCC
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 109 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~p 109 (447)
.-.|.+.+++.+.+.+-. +.+..|. .+...+++ ++++++++.+. .+.++||++|+.+++... ..+
T Consensus 40 h~~p~v~~ai~~ql~~~~---~~~~~~~--~~~~~~la----~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~ 105 (364)
T PRK04013 40 HNHPEWVEEMSEQLEKLV---VAGPMFE--HEEKEEML----EELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYT 105 (364)
T ss_pred CCCHHHHHHHHHHHHhcC---CccCCcC--CHHHHHHH----HHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHh
Confidence 346899999988776521 1111121 22222333 56777776653 244699999999988765 334
Q ss_pred C-CEEEEecCCCCcccCCCccccccccccccc-----eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC-CCC
Q 013217 110 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPR 182 (447)
Q Consensus 110 g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~-~~~ 182 (447)
| ++|++....|.|..... +...+. .+.....++... ...|++.+++.+.+ ++.+|++.+.. ..+
T Consensus 106 gr~~Ii~~~~syHG~t~~~-------ls~~~~~~~~~~~~p~~~~~~~~-~~~d~~~l~~~i~~-~~aAvivEpi~g~gG 176 (364)
T PRK04013 106 GRKEIIAMTNAFHGRTMGA-------LSATWKPKYREDFEPLVPGFKHI-PFNDVEAAKEAITK-ETAAVIFEPIQGEGG 176 (364)
T ss_pred CCCEEEEECCccccCchhh-------ccCCCCcccccCCCCCCCCcEEe-cCCCHHHHHHHhcC-CcEEEEEcCCcCCCC
Confidence 5 89999887655432111 111110 011000001000 12378889988875 78888887422 222
Q ss_pred --CCC---hHHHHHHHHHhCCEEEEehhhhccccccccC-CC-CCC-cccEEEeCCCcccCC-CCCceEEeecCCcchhh
Q 013217 183 --DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVE 253 (447)
Q Consensus 183 --~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~-~~~-~~Di~~~s~~K~l~G-p~gG~i~~~~~~~~~~~ 253 (447)
..| ++++.++|++||+++|.|++|. |+ ..|.. .. -+. ..|+++++ |.++| .+.|.++.+. +
T Consensus 177 ~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~------~ 246 (364)
T PRK04013 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNF------D 246 (364)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEecc------c
Confidence 345 8999999999999999999984 55 33321 10 111 36888885 99854 3346666665 3
Q ss_pred HHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCC
Q 013217 254 LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 333 (447)
Q Consensus 254 ~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~ 333 (447)
+ ......+++ +.++..+++..+.++.+.++++.+.+++. + +.+...-+.-+.+ . .-+.-+.+..
T Consensus 247 ~----~~~~~~~T~-~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~~~v~~vRG-~-Gl~~gve~~~-- 310 (364)
T PRK04013 247 V----ERGKHGSTF-GGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKGERVVTTRG-R-GLMIGIVLKK-- 310 (364)
T ss_pred c----cCCCcCCCC-CcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhccCcceeeee-C-cEEEEEEeCC--
Confidence 3 111122222 23455555555577777665543322221 2 2332211111111 1 1122234432
Q ss_pred CCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 334 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 334 ~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
....+.+.+.++|+.+... ....+|+.++...+ ++|++++.++|.+++...
T Consensus 311 -~~~~i~~~~~~~Gll~~~~---------g~~vlr~~Ppl~it----~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 311 -PVGKYVEELQNRGYLVHTA---------GQRVIRLLPPLIIS----KDTMEEAKSAIEGVINDI 361 (364)
T ss_pred -cHHHHHHHHHhCCcEEeeC---------CCCEEEEeCCcccC----HHHHHHHHHHHHHHHHHH
Confidence 2356777888899998531 12479998887666 999999999999998743
No 320
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.50 E-value=1.2e-10 Score=111.83 Aligned_cols=318 Identities=17% Similarity=0.112 Sum_probs=180.2
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
+|.|.+|+.+.+.+..+.|-|.. +|-...+.+.+++..-. . + -.++|||+|.+.+++.- .-..
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pte-----------~Ei~~Aell~~~~p~~e--~-v-rfvnSGTEAtmsAiRlARa~TgR 135 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPTE-----------LEVELAELLIERVPSIE--K-V-RFVNSGTEATMSAIRLARAYTGR 135 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCH-----------HHHHHHHHHHHhcCccc--E-E-EEecchhHHHHHHHHHHHHhhCC
Confidence 68899999998888665555442 33334467888877622 1 2 22589999988877643 2345
Q ss_pred CEEEEecCCCCcccCCCcccccccc------ccccce----eEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEcC-
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRV------SGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA- 177 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~------~~~g~~----~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~~- 177 (447)
|+|+.+.-.|.||.........+.. ...|.. -.++.++ .-|++.+++++++. +...||+.+
T Consensus 136 ~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------yND~~al~~~~~~~g~~IAaVIvEPv 209 (432)
T COG0001 136 DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------YNDLEALEEAFEEYGDDIAAVIVEPV 209 (432)
T ss_pred CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------CCCHHHHHHHHHHcCCcEEEEEeccc
Confidence 8999888777666321110000000 000100 0011111 24899999999875 456677762
Q ss_pred -CCCCCCCC----hHHHHHHHHHhCCEEEEehhhhcccccc-ccCCCCCC-cccEEEeCCCcccC-CCCCceEEeecCCc
Q 013217 178 -SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 249 (447)
Q Consensus 178 -~~~~~~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~-~~~~~~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~ 249 (447)
.|.+.+.| ++.|+++|+++|+++|.|++. .|+-.. +....-+. ..|+.+.+ |.++ |.+.|.+.+++
T Consensus 210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEVi-TGFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga~gGr~--- 283 (432)
T COG0001 210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVI-TGFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGAFGGRA--- 283 (432)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecch-hhcccCCcccccccCcCcchhhhh--hhhcCCcceeeeccHH---
Confidence 23222222 589999999999999999996 333211 11111111 25777766 9885 45668888888
Q ss_pred chhhHHHHhhhccCCCCCCC--CcHHHHHHHHHHHHHhcC-hhHHHHHHHHHHHHHHHHHHHHH----CCcEeeeCCCCC
Q 013217 250 LGVELESAINNAVFPGLQGG--PHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDN 322 (447)
Q Consensus 250 ~~~~~~~~i~~~~~~~~~g~--p~~~~~aal~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~ 322 (447)
++.+.+...-.-+..|| -|...++|-.++++.+.+ ++ ..+++.+..+.|++.|++ .|+++......+
T Consensus 284 ---eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gs 357 (432)
T COG0001 284 ---EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLRAAAERHGIPLTVNRVGS 357 (432)
T ss_pred ---HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecc
Confidence 78887655321111122 245566666678887765 22 245556666666666544 676654432233
Q ss_pred eeEEe--cCCCCCC------CH---HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 323 HLVLV--DLRPMGI------DG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 323 ~~~~v--~~~~~~~------~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
.+.+. +....+. +. ..+...|.+.||.+. |++ +. ..=+| ..++ ++|+++..+++
T Consensus 358 m~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~----ps~---~e--a~flS--~aht----e~di~~~~~a~ 422 (432)
T COG0001 358 MFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLA----PSQ---FE--AGFLS--TAHT----EEDIDRTLEAA 422 (432)
T ss_pred eEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccC----Ccc---cc--ceeee--cccC----HHHHHHHHHHH
Confidence 33222 2111110 11 123346677899873 222 10 11222 2344 99999999999
Q ss_pred HHHHHHH
Q 013217 392 HEGVEIT 398 (447)
Q Consensus 392 ~~~l~~~ 398 (447)
.++++..
T Consensus 423 ~~~~~~~ 429 (432)
T COG0001 423 DEAFKEL 429 (432)
T ss_pred HHHHHHh
Confidence 9887653
No 321
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.49 E-value=2.2e-11 Score=121.87 Aligned_cols=328 Identities=15% Similarity=0.086 Sum_probs=177.8
Q ss_pred cCeeEecCC--C---CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc
Q 013217 21 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~--n---~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG 95 (447)
..|++..+. . ..+|.+.+++.+.+.+.. .+ +...+ .+....+++.+++. ..+. ...++||
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~~-----~~~~~----~~~~la~~L~~~~~-~~~~---v~~~~sG 115 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--SF-----GAPTE----LEVELAELVIELVP-SIEM---VRMVNSG 115 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--cC-----CCCCH----HHHHHHHHHHHhCC-CCCE---EEEecCH
Confidence 345665432 1 457899999888776521 11 11111 11122346666552 1222 2335889
Q ss_pred HHHHHHHHHHhc--CCCCEEEEecCCCCcccC-CCcccccccc----cccccee-----EEEecccCCCCCCCCHHHHHH
Q 013217 96 SPANFEVYTAIL--KPHDRIMGLDLPHGGHLS-HGFMTPKRRV----SGTSIYF-----ESMPYRLDESTGLVDYDMLEK 163 (447)
Q Consensus 96 s~a~~~~~~al~--~pgd~Vl~~~~~~~~~~~-~~~~~~~~~~----~~~g~~~-----~~~~~~~~~~~~~id~~~l~~ 163 (447)
++|+..++.... ..+++|+..+..|.|+.. .......... ...+... ....++ ..|++++++
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~ 189 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP------YNDLEAVEE 189 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC------CCCHHHHHH
Confidence 999999888653 236789988887665420 0000000000 0000000 001111 147899998
Q ss_pred Hhhh--hCCcEEEEc-CCCCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-CCCCC-cccEEEeCCCcc
Q 013217 164 TAIL--FRPKLIIAG-ASAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKS 233 (447)
Q Consensus 164 ~~~~--~~~klii~~-~~~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~~~~-~~Di~~~s~~K~ 233 (447)
.+.. .++.+|++. ..++.+ ..+ +++|.++|++||+++|+|++|. |+...+.. ..-++ ..|++ +++|.
T Consensus 190 ~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi~--~~gK~ 266 (426)
T PRK00062 190 LFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDLT--TLGKI 266 (426)
T ss_pred HHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcchH--hhhhH
Confidence 8854 255677776 222333 445 7999999999999999999984 65222111 00011 14654 55699
Q ss_pred cC-CCCCceEEeecCCcchhhHHHHhhhc--cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 234 LR-GPRGGMIFFKKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 234 l~-Gp~gG~i~~~~~~~~~~~~~~~i~~~--~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
++ |.+.|++++++ ++.+.+... ...+..-+.+....++..++++.+... ++.+++.+..+++++.|++
T Consensus 267 l~~G~p~ga~~~~~------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~ 337 (426)
T PRK00062 267 IGGGLPVGAFGGRR------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKE 337 (426)
T ss_pred hhCCCcceeeeEHH------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHH
Confidence 85 55678888877 677776421 111111123445555555677776543 3466666777777777654
Q ss_pred ----CCcEeeeCCCCCeeEEecCCCCCC---------C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCcc
Q 013217 311 ----LGYKLVSGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 374 (447)
Q Consensus 311 ----~g~~~~~~~~~~~~~~v~~~~~~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~ 374 (447)
.++..-..+. ..+.-+.+.+... + ...+.+.|.++||.+... . ...+++. ..
T Consensus 338 ~~~~~~~~~~vrg~-G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~----~-----~~~~~~~--~~ 405 (426)
T PRK00062 338 AAKKAGIPLTVNRV-GSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS----Q-----FEAGFVS--AA 405 (426)
T ss_pred HHHHcCCceEEEEe-cceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC----C-----cCceeee--cc
Confidence 3543211111 1222222221100 1 245777888899998532 1 1235553 33
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 013217 375 TTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 375 ~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+ ++|++++.+++++++..
T Consensus 406 ~t----~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 406 HT----DEDIEKTLEAARKAFAA 424 (426)
T ss_pred CC----HHHHHHHHHHHHHHHHh
Confidence 44 99999999999988863
No 322
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.49 E-value=7.2e-12 Score=122.80 Aligned_cols=293 Identities=23% Similarity=0.265 Sum_probs=186.5
Q ss_pred HHHHHHcCCCCCccceeeecCCcHHH---HHHHHHHhc-CCCC----EEEEecCCCCcccCCCccccccccccccceeEE
Q 013217 73 KRALAAFNLDENKWGVNVQPLSGSPA---NFEVYTAIL-KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 144 (447)
Q Consensus 73 ~~~~~~~g~~~~~~~~~v~~~sGs~a---~~~~~~al~-~pgd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 144 (447)
++++++.|.+. +.+|+.||+++ -..++++.+ ..|+ ..+++.-.||-+.. ...+.| .++
T Consensus 589 ~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Mag--mkv 654 (1001)
T KOG2040|consen 589 KDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMAG--MKV 654 (1001)
T ss_pred HHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhcC--CEE
Confidence 68999999987 68999999844 344555553 3332 24455444554321 223444 578
Q ss_pred EecccCCCCCCCCHHHHHHHhhhhCC--cEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhh---ccccccccCC
Q 013217 145 MPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHI---SGLVAASVVA 217 (447)
Q Consensus 145 ~~~~~~~~~~~id~~~l~~~~~~~~~--klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~---~g~~~~~~~~ 217 (447)
++++++ .+|.||+.+|++..++++- ..+.++.|+.-+ .-++++++++.++||--|..|+|.- .|+.
T Consensus 655 vpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc------ 727 (1001)
T KOG2040|consen 655 VPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLC------ 727 (1001)
T ss_pred EEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceeccc------
Confidence 888887 5789999999999887643 456666555444 4579999999999999999999853 2332
Q ss_pred CCCC-cccEEEeCCCcccCC------CCCceEEeecCCcchhhHHHHhhh--ccCCC----------CCCCCc-HHHHHH
Q 013217 218 DPFK-YCDVVTTTTHKSLRG------PRGGMIFFKKDPVLGVELESAINN--AVFPG----------LQGGPH-NHTIGG 277 (447)
Q Consensus 218 ~~~~-~~Di~~~s~~K~l~G------p~gG~i~~~~~~~~~~~~~~~i~~--~~~~~----------~~g~p~-~~~~aa 277 (447)
.|-+ ++|+.--..||+|+- |..|-|.+++ .+...+.. .+.++ ....|. ...+..
T Consensus 728 ~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~------HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILp 801 (1001)
T KOG2040|consen 728 RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK------HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILP 801 (1001)
T ss_pred CCccccccceeecccceeeecCCCCCCCCCccchhh------hccccCCCCCccCCCCCCCCCCccceeccCCCcceeeh
Confidence 2222 589999999999853 3336677766 33322211 11110 011111 011222
Q ss_pred H-HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeee-C--CCCCeeEEecCCCC----CCCHHHHHHHHhhcCeE
Q 013217 278 L-AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-G--GSDNHLVLVDLRPM----GIDGARVEKILDMASIT 349 (447)
Q Consensus 278 l-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~--~~~~~~~~v~~~~~----~~~~~~~~~~L~~~gI~ 349 (447)
+ ++-++++...|+++-.+-..-|+++++++|+.. ++++. + +...|-+++|+++. +++..++.++|.++|+.
T Consensus 802 ISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFH 880 (1001)
T KOG2040|consen 802 ISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFH 880 (1001)
T ss_pred hHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCC
Confidence 2 333566666677777777889999999999884 44443 2 34567788898763 57788999999999998
Q ss_pred EccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 013217 350 LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK 403 (447)
Q Consensus 350 v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~~~~ 403 (447)
.-..++| .++.+-|-... +-+.+|+|++++++-.+-++...+++
T Consensus 881 aPTmswP------V~gtLMIEPTE----SE~k~ElDRfcdAliSIreEI~~ie~ 924 (1001)
T KOG2040|consen 881 APTMSWP------VAGTLMIEPTE----SEDKAELDRFCDALISIREEIAQIEE 924 (1001)
T ss_pred CCccccc------cCCceEeccCc----cccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6443333 23455554333 33488999999988666665555543
No 323
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.48 E-value=7.7e-11 Score=118.14 Aligned_cols=321 Identities=16% Similarity=0.116 Sum_probs=173.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++.+.+.+- ..+.. .. + ..+ ... ...+++.+++....+. ....+||++|+.+++....
T Consensus 66 ~~p~v~~ai~~ql~~l-~~~~~-~~-~-~~~---~~~-~la~~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~~~ 134 (445)
T PRK09221 66 GRPEIVEAVARQAATL-DYAPA-FQ-M-GHP---LAF-ELAERLAELAPGGLDH---VFFTNSGSESVDTALKIALAYHR 134 (445)
T ss_pred CCHHHHHHHHHHHHhc-cCccc-cc-c-CCH---HHH-HHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 4788999888777541 11111 11 1 111 111 2235666776422221 2335899999998876432
Q ss_pred --C-C-CCEEEEecCCCCcccCCCcccccccccccc------------ceeEEEecccCCCC--CC--------CCHHHH
Q 013217 108 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDEST--GL--------VDYDML 161 (447)
Q Consensus 108 --~-p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~--~~--------id~~~l 161 (447)
. + ..+|+...-.|.|.-. + .+...+ ..+..++++.+... +. -..+++
T Consensus 135 ~~g~~~r~~ii~~~~~yHG~t~-g------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (445)
T PRK09221 135 ARGQGTRTRLIGRERGYHGVGF-G------GISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDL 207 (445)
T ss_pred hcCCCCCcEEEEECCCcCccch-h------hhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHH
Confidence 1 2 3578887765443310 0 000111 00122222210000 00 113577
Q ss_pred HHHhhhh---CCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC--CCCCC-cccEEEeC
Q 013217 162 EKTAILF---RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTT 229 (447)
Q Consensus 162 ~~~~~~~---~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~--~~~~~-~~Di~~~s 229 (447)
+++++.. ++.+|++.+. ...+ ..+ ++++.++|+++|+++|+|++|. |+-..|.. ..-++ ..|+++++
T Consensus 208 ~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~gv~PDi~~~g 286 (445)
T PRK09221 208 ERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDIITFA 286 (445)
T ss_pred HHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhcCCCCCEEEec
Confidence 7777532 3456776631 1223 445 8999999999999999999984 43211110 00011 24887665
Q ss_pred CCcccCC--CCCceEEeecCCcchhhHHHHhhhc------c-CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 230 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA------V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 230 ~~K~l~G--p~gG~i~~~~~~~~~~~~~~~i~~~------~-~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
|.++| .+.|.+++++ ++.+.+... . ..++.++ +...+++..++++.+.+++ +.++..+.
T Consensus 287 --K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~~-~pl~~aaa~a~L~~i~~~~---l~~~~~~~ 354 (445)
T PRK09221 287 --KGLTNGAIPMGAVIASD------EIYDAFMQGPEYAIEFFHGYTYSA-HPVACAAGLATLDIYREED---LFERAAEL 354 (445)
T ss_pred --cccccCcccceeeEEcH------HHHHhhccCcccccccccccCCCc-CHHHHHHHHHHHHHHHhcc---HHHHHHHH
Confidence 98854 3466777776 666655321 1 1122332 4444555455777765443 46777788
Q ss_pred HHHHHHHHHHC-CcEeeeCCCCC-eeEEecCCCC----CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCcc
Q 013217 301 CRALASRLVEL-GYKLVSGGSDN-HLVLVDLRPM----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 374 (447)
Q Consensus 301 ~~~l~~~L~~~-g~~~~~~~~~~-~~~~v~~~~~----~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~ 374 (447)
.++|++.|++. ++..+.+-... -+.-+.+... ......+.+.|.++||.++.. ...+|+.++..
T Consensus 355 g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----------~~~lr~~Ppl~ 424 (445)
T PRK09221 355 APYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT----------GDTIALSPPLI 424 (445)
T ss_pred HHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec----------CCEEEEECCcc
Confidence 88888888763 22222210011 1112233221 112346777888899998531 24799998877
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 013217 375 TTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 375 ~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
.+ ++|++++.+.+++++..
T Consensus 425 ~t----~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 425 IE----KAQIDELVDALGDALRA 443 (445)
T ss_pred CC----HHHHHHHHHHHHHHHHh
Confidence 77 99999999999998863
No 324
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=3.2e-10 Score=113.07 Aligned_cols=330 Identities=17% Similarity=0.144 Sum_probs=177.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-.|.|.+++.+.+.+- . +.....+ ..+ ... ...+++.+++.-...+. ....+||++|+.+++... ...
T Consensus 57 ~~p~v~~ai~~ql~~l-~--~~~~~~~-~~~---~~~-~la~~l~~~~p~~~~~~--v~f~~SGseA~e~AlklAr~~tg 126 (425)
T PRK07495 57 RHPRVIAAVKAQLDRF-T--HTCHQVV-PYE---NYV-RLAERLNALVPGDFAKK--TIFVTTGAEAVENAVKIARAATG 126 (425)
T ss_pred CCHHHHHHHHHHHhhc-c--CcccCcc-CCH---HHH-HHHHHHHHhCCCCCCCE--EEECCchHHHHHHHHHHHHHhhC
Confidence 4788999988877642 1 1110001 111 111 22356667664321111 244689999999887643 233
Q ss_pred CCEEEEecCCCCcccCCCc------cccccccccccceeEEEecccCCCCCCCC----HHHHHHHhhh----hCCcEEEE
Q 013217 110 HDRIMGLDLPHGGHLSHGF------MTPKRRVSGTSIYFESMPYRLDESTGLVD----YDMLEKTAIL----FRPKLIIA 175 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~id----~~~l~~~~~~----~~~klii~ 175 (447)
..+|+...-.|.|.-.-.. ........-.-..+..++++.+ ..+ .+ ++++++.+.. .++.+|++
T Consensus 127 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~l~~~~~~~~~~~~iaavi~ 204 (425)
T PRK07495 127 RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHG-VSVEQSLAALDKLFKADVDPQRVAAIII 204 (425)
T ss_pred CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-ccc-ccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 4578877765544310000 0000000000001223333322 111 22 4455666542 35677887
Q ss_pred cCC-CCCCCC-----ChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC-CCCCceEEee
Q 013217 176 GAS-AYPRDF-----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFK 245 (447)
Q Consensus 176 ~~~-~~~~~~-----~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~ 245 (447)
.+. .+++.. -+++|.++|++||+++|+|++|. |+...+.. . ...+ ..|++++ +|.++ |.+.|+++++
T Consensus 205 EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~tl--sK~l~~G~pigav~~~ 281 (425)
T PRK07495 205 EPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTTM--AKGLAGGFPLAAVTGR 281 (425)
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEee--hhhhcCCccceEEEEc
Confidence 632 223321 26899999999999999999974 55333321 0 1111 2466655 59985 5567889888
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeeeC--CCC
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--GSD 321 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~ 321 (447)
+ ++.+.+.......+.+ .+...+++..++++.+.+.+ +.++..+..++|.+.|++. .+..+.. +.
T Consensus 282 ~------~i~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~- 350 (425)
T PRK07495 282 A------EIMDAPGPGGLGGTYG-GNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLASLRETVPEIADIRGP- 350 (425)
T ss_pred H------HHHhccCCCCcCCCCC-CCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-
Confidence 7 6766665432222333 34444555555777765443 3555666666676666551 1221211 22
Q ss_pred CeeEEecCCCCC---CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMG---ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 322 ~~~~~v~~~~~~---~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
..+.++.+.+.. -+ ...+.+.+.++|+.+... + + ..+.+|+.++...+ ++|+++++++|.+++
T Consensus 351 Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g---~-~~~~~r~~Ppl~it----~~~id~~~~~l~~~l 419 (425)
T PRK07495 351 GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G---V-HGNVIRFLAPITIQ----DDVFAEALDILEASI 419 (425)
T ss_pred ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C---C-CCCEEEEeCCCccC----HHHHHHHHHHHHHHH
Confidence 334556553211 01 234666777899998532 1 1 13579998887666 999999999999998
Q ss_pred HHH
Q 013217 396 EIT 398 (447)
Q Consensus 396 ~~~ 398 (447)
...
T Consensus 420 ~~~ 422 (425)
T PRK07495 420 LEA 422 (425)
T ss_pred HHH
Confidence 754
No 325
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.48 E-value=8.8e-11 Score=116.93 Aligned_cols=320 Identities=15% Similarity=0.077 Sum_probs=178.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++.+.+.+-. ....+. + ..+ ... ...+++.+++....+. ....+||++|+.+++.-..
T Consensus 60 ~~p~i~~Ai~~q~~~~~-~~~~~~-~--~~~---~~~-~la~~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~~~ 128 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMS-HVMFGG-I--THP---PAI-ELCRKLVAMTPQPLEC---VFLADSGSVAVEVAMKMALQYWQ 128 (428)
T ss_pred CCHHHHHHHHHHHhhcC-Cccccc-c--CCH---HHH-HHHHHHHhhCCCCcCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 46889999887775421 111100 0 111 111 2234666666432221 2345899999998876432
Q ss_pred ---CCCCEEEEecCCCCcccCCCccccccccccccc-------------eeEEEecccCCCC---CCCCHHHHHHHhhhh
Q 013217 108 ---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAILF 168 (447)
Q Consensus 108 ---~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~id~~~l~~~~~~~ 168 (447)
....+|+...-.|.|.- .+ .+.+.+. ....++.+..... ..-|++++++.++..
T Consensus 129 ~~g~~r~kii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~ 201 (428)
T PRK07986 129 AKGEPRQRFLTLRHGYHGDT-FG------AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH 201 (428)
T ss_pred hcCCCCcEEEEECCCcCCCc-Hh------hhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC
Confidence 23468888876654421 00 0011110 0111222111000 023667888877642
Q ss_pred --CCcEEEEcC--CCCCCC-----CChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCC
Q 013217 169 --RPKLIIAGA--SAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG 236 (447)
Q Consensus 169 --~~klii~~~--~~~~~~-----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~G 236 (447)
+..+|++.+ ...++. .-+++|+++|++||+++|+|++| .|+-..|.. . .-.+ ..|+++ +.|.|+|
T Consensus 202 ~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~g 278 (428)
T PRK07986 202 RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALTG 278 (428)
T ss_pred CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhhC
Confidence 345666653 233332 12789999999999999999998 665222211 0 0111 258886 4699854
Q ss_pred C--CCceEEeecCCcchhhHHHHhhhcc-----CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH
Q 013217 237 P--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 309 (447)
Q Consensus 237 p--~gG~i~~~~~~~~~~~~~~~i~~~~-----~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 309 (447)
. +.|.+++++ ++.+.+.... ..++++ .++..+++..++++.+.+++ +.+++.+..++|.+.|+
T Consensus 279 G~~p~~av~~~~------~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~l~ 348 (428)
T PRK07986 279 GTMTLSATLTTR------EVAETISNGEAGCFMHGPTFM-GNPLACAVANASLSLLESGD---WQQQVAAIEAQLREELA 348 (428)
T ss_pred CcccCcchhchH------HHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHH
Confidence 3 446667776 6777665321 122223 34555666666777766543 46677777788888877
Q ss_pred HC-CcEeeeCCC-CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 310 EL-GYKLVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 310 ~~-g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
+. ....+..-. ...+..+.+... .....+.+.|.++||.+... ...||+.++...+ ++|++++
T Consensus 349 ~l~~~~~i~~vRg~Gl~~~ve~~~~-~~~~~~~~~l~~~Gl~~~~~----------g~~i~~~Ppl~it----~~ei~~~ 413 (428)
T PRK07986 349 PLRDAPMVADVRVLGAIGVVETTRP-VNMAALQRFFVEQGVWIRPF----------GKLIYLMPPYIIL----PEQLQRL 413 (428)
T ss_pred HHhcCCCEEeEeccceEEEEEeCCc-ccHHHHHHHHHHCCcEEEec----------CCEEEEeCCCCCC----HHHHHHH
Confidence 62 222222100 122333444322 13467888888999998531 2379998887777 9999999
Q ss_pred HHHHHHHHHH
Q 013217 388 ADFIHEGVEI 397 (447)
Q Consensus 388 ~~~i~~~l~~ 397 (447)
.++|.+++..
T Consensus 414 ~~~l~~~l~~ 423 (428)
T PRK07986 414 TAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHhh
Confidence 9999999863
No 326
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=1.6e-10 Score=115.34 Aligned_cols=321 Identities=13% Similarity=0.061 Sum_probs=174.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcHHHHHHHHHHh--cC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI--LK 108 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs~a~~~~~~al--~~ 108 (447)
-.|.+.+++.+.+.+-. +.....+. .+ ..++ . .+++.+++... .+. .+..+||++|+.+++... ..
T Consensus 57 ~~p~v~~ai~~ql~~~~---~~~~~~~~-~~--~~~~-l-a~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK06777 57 RHPKVVAAVRQQLDQFT---HTAYQIVP-YA--SYVT-L-AERINALAPIDGPAK---TAFFTTGAEAVENAVKIARAYT 125 (421)
T ss_pred CCHHHHHHHHHHHhhcc---cccccccC-Ch--HHHH-H-HHHHHHhCCCCCCce---EEEeCCcHHHHHHHHHHHHHhh
Confidence 47888888888776421 11111011 11 1121 2 24566666422 121 233589999999887643 22
Q ss_pred CCCEEEEecCCCCcccCCCccccccccccccc-------------eeEEEecccCCC--CCCCCHHHHHHHhhh----hC
Q 013217 109 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--TGLVDYDMLEKTAIL----FR 169 (447)
Q Consensus 109 pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~~id~~~l~~~~~~----~~ 169 (447)
...+|+...-.|.|.-. + .+.+.+. .+..++++-... ...-+++.+++.+.. .+
T Consensus 126 gr~~ii~~~~~yHG~t~-~------~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (421)
T PRK06777 126 GRPGVIAFGGAFHGRTL-L------TMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQ 198 (421)
T ss_pred CCCeEEEEcCCcCCccH-H------HHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCc
Confidence 34568877765444310 0 0111110 011112221000 011246677877752 24
Q ss_pred CcEEEEcCCC-CCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC-CCCC
Q 013217 170 PKLIIAGASA-YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRG 239 (447)
Q Consensus 170 ~klii~~~~~-~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~-Gp~g 239 (447)
+.+|++.+.. ..+ ..+ +++|.++|++||+++|+|++|. |+...+.. . ..++ ..|+++ ++|.++ |.+.
T Consensus 199 iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv~--~sK~l~~G~pi 275 (421)
T PRK06777 199 VAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLIT--MAKSLGGGMPI 275 (421)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEEe--eehhhcCCCce
Confidence 5677776321 222 334 7899999999999999999974 65433321 1 0011 257774 569884 5677
Q ss_pred ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC----Cc-E
Q 013217 240 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GY-K 314 (447)
Q Consensus 240 G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~ 314 (447)
|++++++ ++.+.+......++.+ .+....++..++++.+.++ +..++..+..++|.+.|++. ++ .
T Consensus 276 gav~~~~------~i~~~~~~~~~~~T~~-~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 345 (421)
T PRK06777 276 SAVVGRA------EVMDAPAPGGLGGTYA-GNPLAVAAALAVLDVIAEE---KLCQRALILGAHLVEVLEKAKASCPAIV 345 (421)
T ss_pred EEEEEcH------HHHhccCCCCCCCCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 9999887 6777665433323333 3555555555677766543 45677777788888888762 21 1
Q ss_pred eeeCCCCCeeEEecCCC--CCCC----HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHH
Q 013217 315 LVSGGSDNHLVLVDLRP--MGID----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 388 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~--~~~~----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~ 388 (447)
.+. +....+ .+.+.. .+.+ ...+.+.|.+.||.+.. +.. + .+.+|+.++...+ +++++++.
T Consensus 346 ~vr-g~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~----~~~--~-g~~lr~~ppl~i~----~~~i~~~~ 412 (421)
T PRK06777 346 DIR-ARGSMV-AVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLS----CGV--H-GNVIRFLYPLTIP----DAQFSKAL 412 (421)
T ss_pred Eec-CceEEE-EEEEecCccCCccHHHHHHHHHHHHhCCeEEee----cCC--C-CCEEEEeCCCCCC----HHHHHHHH
Confidence 121 222332 222221 1111 12344456779999843 211 1 2489999876555 99999999
Q ss_pred HHHHHHHH
Q 013217 389 DFIHEGVE 396 (447)
Q Consensus 389 ~~i~~~l~ 396 (447)
+.|.+++.
T Consensus 413 ~~l~~~l~ 420 (421)
T PRK06777 413 NILTRLLA 420 (421)
T ss_pred HHHHHHHh
Confidence 99988764
No 327
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=2.6e-10 Score=114.64 Aligned_cols=329 Identities=13% Similarity=0.084 Sum_probs=173.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-.|.|.+++.+.+.+ .. .+... ....+ ... ...+++.+++....... ...++||++|+.+++... ...
T Consensus 73 ~~p~v~~ai~~q~~~-~~-~~~~~--~~~~~---~~~-~la~~l~~~~p~~~~~~--v~f~~sGseA~e~AlklAr~~tg 142 (443)
T PRK06058 73 SAPRVVEAVREQVAR-FT-HTCFM--VTPYE---GYV-AVAEQLNRLTPGDHEKR--SALFNSGAEAVENAVKIARSYTG 142 (443)
T ss_pred CCHHHHHHHHHHHHh-cc-Ccccc--ccCCH---HHH-HHHHHHHHhCCCCCCCE--EEEeCCcHHHHHHHHHHHHHhhC
Confidence 368898888887754 11 01000 01111 112 22356767664321111 234689999999888732 223
Q ss_pred CCEEEEecCCCCcccCC-----Cc-cccccccc-cccceeEEEecc--cCC-CCCCCC--------HHHHHHHhhhhCCc
Q 013217 110 HDRIMGLDLPHGGHLSH-----GF-MTPKRRVS-GTSIYFESMPYR--LDE-STGLVD--------YDMLEKTAILFRPK 171 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~-----~~-~~~~~~~~-~~g~~~~~~~~~--~~~-~~~~id--------~~~l~~~~~~~~~k 171 (447)
.++|++....|.|.-.- +. ........ ... ....++++ .+. .....+ ++.+++.+...++.
T Consensus 143 r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA 221 (443)
T PRK06058 143 RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAP-EVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLA 221 (443)
T ss_pred CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCC-CceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceE
Confidence 47898887665443200 00 00000000 000 01111211 110 000111 22333333323567
Q ss_pred EEEEcCCC-CCCCC-C----hHHHHHHHHHhCCEEEEehhhhccccccccC-CCC-CC-cccEEEeCCCcccC-CCCCce
Q 013217 172 LIIAGASA-YPRDF-D----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTTHKSLR-GPRGGM 241 (447)
Q Consensus 172 lii~~~~~-~~~~~-~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~~-~~-~~Di~~~s~~K~l~-Gp~gG~ 241 (447)
+|++.+.. .++.. + +++|+++|++||+++|+|+++ .|+...+.. ... ++ ..|+++++ |.++ |.+.|+
T Consensus 222 avi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~Pi~a 298 (443)
T PRK06058 222 AVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQ-TGFARTGAWFACEHEGIVPDLITTA--KGIAGGLPLSA 298 (443)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcChhhhHHHhcCCCCCEEEEc--ccccCCCccEE
Confidence 78776321 22322 2 799999999999999999997 454333311 000 11 25888885 9985 555688
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeee--
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS-- 317 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-- 317 (447)
+++++ ++.+.+......++. +.+...+++..++++.+.+++ ..++..+..++|.+.|++. ...++.
T Consensus 299 v~~~~------~i~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 368 (443)
T PRK06058 299 VTGRA------EIMDAPHPGGLGGTY-GGNPVACAAALAAIETIEEDD---LVARARQIEALMTDRLRALAAEDDRIGDV 368 (443)
T ss_pred EEEcH------HHHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHhhCCcEEee
Confidence 88887 676666543222222 335555666666777665443 4566666677777777662 122221
Q ss_pred CCCCCeeEEecCCCC--CC-C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 318 GGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 318 ~~~~~~~~~v~~~~~--~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
.+... +..+.+... .. + ...+.+.|.++||.+... . ++ ...||+.++...+ ++|++++++++
T Consensus 369 rg~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~----~--~~-~~~lr~~Ppl~~t----~~~i~~~~~~l 436 (443)
T PRK06058 369 RGRGA-MIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTC----G--TY-GNVIRLLPPLVIG----DELLREGLDVL 436 (443)
T ss_pred eccce-EEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEecc----C--CC-CCEEEEECCCccC----HHHHHHHHHHH
Confidence 12222 222333211 11 1 234556667899998532 1 11 2479998887777 99999999999
Q ss_pred HHHHH
Q 013217 392 HEGVE 396 (447)
Q Consensus 392 ~~~l~ 396 (447)
++++.
T Consensus 437 ~~~l~ 441 (443)
T PRK06058 437 EAALA 441 (443)
T ss_pred HHHHH
Confidence 98875
No 328
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.47 E-value=2e-10 Score=114.29 Aligned_cols=330 Identities=13% Similarity=0.075 Sum_probs=171.6
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcHHHHHHHHHHhc-
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAIL- 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs~a~~~~~~al~- 107 (447)
.-.|.|.+++.+.+.+. ++.....+ ..+ ... ...+++.++...+ .... +.+..+||++|+..++....
T Consensus 51 h~~p~v~~ai~~ql~~~---~~~~~~~~-~~~---~~~-~lae~l~~~~~~~~~~~~~-~~f~~~sGseA~e~AlklAr~ 121 (412)
T TIGR02407 51 HNNPKLKQALIDYLADD---GIIHSLDM-ATE---AKR-EFLETFNEIILKPRGLDYK-VQFPGPTGTNAVESALKLARK 121 (412)
T ss_pred CCCHHHHHHHHHHHhhc---cceecccc-CcH---HHH-HHHHHHHHhccCccCCCce-EEEeCCCchHHHHHHHHHHhh
Confidence 34799999998877641 11111001 111 111 1224555553211 1111 22324799999998887542
Q ss_pred -CCCCEEEEecCCCCcccCC-----CccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcEEEEc
Q 013217 108 -KPHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG 176 (447)
Q Consensus 108 -~pgd~Vl~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-----~~klii~~ 176 (447)
....+|+...-.|.|.-.. +..............+..+|++.-.....-+++.+++.+.++ ++.+|++.
T Consensus 122 ~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~E 201 (412)
T TIGR02407 122 VTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILE 201 (412)
T ss_pred hcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEec
Confidence 2346788877654443100 000000000000001112222100000012467788877642 45677775
Q ss_pred CC-CCCCC--C---ChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC--CCCCceEEee
Q 013217 177 AS-AYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPRGGMIFFK 245 (447)
Q Consensus 177 ~~-~~~~~--~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~--Gp~gG~i~~~ 245 (447)
+- +..+. . -+++|.++|++||+++|+|+++. |+-..+.. . .... ..|++++| |+|+ |.+.|+++++
T Consensus 202 pi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~~--K~lg~~G~pigav~~~ 278 (412)
T TIGR02407 202 TVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLPLALTLIK 278 (412)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEec--hhccCCccceeEEEEc
Confidence 32 12222 1 26899999999999999999974 43211110 0 0011 25888765 9985 4456888888
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHH-hcChhHHHHHHHHHHHHHHHHHHHHH----CC-cEeeeCC
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGG 319 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~-~~~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~ 319 (447)
+ ++ +.+......+++ +.+...+++..++++. +.+.. +.+++.+..++|.+.|++ .+ +..-..+
T Consensus 279 ~------~~-~~~~~~~~~~T~-~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg 347 (412)
T TIGR02407 279 P------EL-DVWKPGEHNGTF-RGNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLDRIVAEYPELIKQVRG 347 (412)
T ss_pred h------hh-hccCCCccCCCC-CccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhhCCCceEeeec
Confidence 7 44 333322211222 2344445554456664 44333 345555566666666654 22 2111111
Q ss_pred CCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 320 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 320 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
...+.++.+.+. .....+.+.|.++||.+... . .....||+.++...+ ++|++++.+.+++++.
T Consensus 348 -~Gl~~~l~l~~~-~~~~~~~~~~~~~Gv~v~~~----~---~~~~~lr~~p~l~~t----~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 348 -RGLMQGIECGDG-DLAGKIAKAAFENGLIIETS----G---PNDEVIKLLPPLTID----EETLQQGLDILEQAVE 411 (412)
T ss_pred -ceeEEEEEecCh-HHHHHHHHHHHHCCCEEecc----C---CCCCEEEEECCCCCC----HHHHHHHHHHHHHHHh
Confidence 234456666432 23456778888899998532 1 113579999988777 9999999999998875
No 329
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.46 E-value=1.2e-10 Score=116.44 Aligned_cols=332 Identities=14% Similarity=0.092 Sum_probs=172.1
Q ss_pred CCHHHHHHHhhhhhcc-CCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC--CCccceeeecCCcHHHHHHHHHHh--
Q 013217 32 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAI-- 106 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~-~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~--~~~~~~~v~~~sGs~a~~~~~~al-- 106 (447)
-.|.|.+++.+.+.+. +..+ .. + ..+ ...+. .+++.+.+..+ .+.. +.+..+||++|+.+++...
T Consensus 56 ~~p~v~~ai~~ql~~~~~~~~---~~-~-~~~---~~~~l-ae~l~~~~~~~~~~~~~-~~f~~~sGseA~e~AlklAr~ 125 (425)
T PRK09264 56 NNPVLKQALIDYLQRDGITHG---LD-M-HTT---AKREF-LETFEETILKPRGLDYK-VQFTGPTGTNAVEAALKLARK 125 (425)
T ss_pred CCHHHHHHHHHHHHhcccccc---cc-c-CcH---HHHHH-HHHHHHhhcCCcCCCce-EEEeCCCHHHHHHHHHHHHHH
Confidence 4799999988877641 1111 00 1 111 11112 24555554222 1111 2232369999999887644
Q ss_pred cCCCCEEEEecCCCCcccC----C-CccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcEEEEc
Q 013217 107 LKPHDRIMGLDLPHGGHLS----H-GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG 176 (447)
Q Consensus 107 ~~pgd~Vl~~~~~~~~~~~----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~-----~~klii~~ 176 (447)
.....+|+...-.|.|.-. . +....+.........+..++++.......-|++++++++.+. ++.+|++.
T Consensus 126 ~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~E 205 (425)
T PRK09264 126 VTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVE 205 (425)
T ss_pred hcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEe
Confidence 2234678877655433310 0 000000000000001222333211000113678888888642 34567765
Q ss_pred CC-CCCC--CC---ChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC--CCCCceEEee
Q 013217 177 AS-AYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPRGGMIFFK 245 (447)
Q Consensus 177 ~~-~~~~--~~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~--Gp~gG~i~~~ 245 (447)
+- ...+ .. .+++|+++|++||+++|+|++|. |+...|.. . ...+ ..|++++| |.|+ |.+.|+++++
T Consensus 206 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~~--K~l~~~G~pigav~~~ 282 (425)
T PRK09264 206 TVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTLS--KSISGYGLPMALVLIK 282 (425)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEec--cccCCCccceEEEEEc
Confidence 21 1222 22 47999999999999999999984 43222210 0 0011 25887665 9885 3345888888
Q ss_pred cCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEe-eeCCC-C
Q 013217 246 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKL-VSGGS-D 321 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~-~~~~~-~ 321 (447)
+ ++ ..+......++. +.+...+++..++++.+... .++.+++.++.++|.+.|++. .+.. ..... .
T Consensus 283 ~------~i-~~~~~~~~~~T~-~gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~ 352 (425)
T PRK09264 283 P------EL-DVWKPGEHNGTF-RGNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGR 352 (425)
T ss_pred h------hh-hccCCCccCCCC-CCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCceecceec
Confidence 7 44 233222222222 22344444444456332211 234666777777777776552 1221 11101 1
Q ss_pred CeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..+.++.+... .....+.+.|.+.||.+... . .....||++++..++ ++|++++.+.|.+++...
T Consensus 353 Gl~~~i~l~~~-~~~~~l~~~~~~~Gv~~~~~----~---~~~~~lr~~p~l~~t----~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 353 GMMQGIDFGDG-ELAGKIAAEAFENGLIIETS----G---PEDEVVKLLPPLTID----EEELEEGLDILEEAVAEV 417 (425)
T ss_pred ccEEEEEecCh-HHHHHHHHHHHHCCCEEecc----C---CCCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 23345555432 12456778888899998531 1 113589999887777 999999999999998754
No 330
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=1.5e-10 Score=115.53 Aligned_cols=320 Identities=13% Similarity=0.041 Sum_probs=178.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++...+.+- . +.....+. . ..+....+++.+.+....+. ....+||++|+.+++....
T Consensus 61 ~~p~v~~ai~~q~~~~-~--~~~~~~~~-~----~~~~~lae~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~~~ 129 (429)
T PRK06173 61 NHPRLNAAATNQLAKM-S--HIMFGGFT-H----EPAVELAQKLLEILPPSLNK---IFFADSGSVAVEVAMKMALQYQQ 129 (429)
T ss_pred CCHHHHHHHHHHHHhc-C--CccccccC-C----HHHHHHHHHHHhhCCCCcCE---EEEeCCchHHHHHHHHHHHHHHH
Confidence 3688888887766541 1 11000001 1 11112234566665322221 2346899999998876432
Q ss_pred ---CCC-CEEEEecCCCCcccCCCccccccccccccc-------------eeEEEecccCCCC---CCCCHHHHHHHhhh
Q 013217 108 ---KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAIL 167 (447)
Q Consensus 108 ---~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~id~~~l~~~~~~ 167 (447)
++| .+|+...-.|.|.- .+ .+.+++. ....++++..... ..-+++.+++.+..
T Consensus 130 ~~g~~~r~~ii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~ 202 (429)
T PRK06173 130 AKGEVQRTKFATIRSGYHGDT-WH------AMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ 202 (429)
T ss_pred HhCCCCCcEEEEECCCcCCcc-hh------hhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh
Confidence 133 57888776654431 00 0011110 0111222211000 01246667777753
Q ss_pred --hCCcEEEEcCC--CCCCC--CC---hHHHHHHHHHhCCEEEEehhhhccccccccC--CCCCC-cccEEEeCCCcccC
Q 013217 168 --FRPKLIIAGAS--AYPRD--FD---YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 235 (447)
Q Consensus 168 --~~~klii~~~~--~~~~~--~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~--~~~~~-~~Di~~~s~~K~l~ 235 (447)
.++.+|++.+- ..++. .+ +++++++|++||+++|+|++| .|+-..|.. ..-++ ..|+++ +.|.|.
T Consensus 203 ~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~ 279 (429)
T PRK06173 203 KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALT 279 (429)
T ss_pred CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhh
Confidence 24567777642 23332 12 589999999999999999999 775322211 01111 258887 469985
Q ss_pred CC--CCceEEeecCCcchhhHHHHhhhc-----cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHH
Q 013217 236 GP--RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 308 (447)
Q Consensus 236 Gp--~gG~i~~~~~~~~~~~~~~~i~~~-----~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 308 (447)
|. ..|.++.++ ++.+.+... ...++++ .+...+++..++++.+.+++ ..+++.++.++|.+.|
T Consensus 280 gG~~p~~a~~~~~------~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L 349 (429)
T PRK06173 280 GGYLTLSATITTE------AIAQTICSGEAKCFMHGPTFM-ANPLACAIAAESIRLLLESP---WQQNIQRIEAQLKQEL 349 (429)
T ss_pred CCccccceEEecH------HHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHH
Confidence 43 456667776 666655421 1111222 35556666666787776543 3667778888888888
Q ss_pred HHC-CcEeeeCC-CCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 309 VEL-GYKLVSGG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 309 ~~~-g~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
++. ++..+..- ....+.-+.+... .....+.+.|.++||.+... ...||+.++...+ ++|+++
T Consensus 350 ~~~~~~~~v~~vRg~Gl~~~iel~~~-~~~~~i~~~l~e~Gi~v~~~----------g~~l~~~Ppl~it----~~ei~~ 414 (429)
T PRK06173 350 APAAEFDSVAEVRVLGAIGVVEMKEP-VNMATLQPRFVEHGIWVRPF----------GKLVYIMPPFIIS----PDELSQ 414 (429)
T ss_pred HHhhcCCCeeeeeccceEEEEEeCCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEeCCccCC----HHHHHH
Confidence 753 34333210 1233444555432 23467888888999998531 2479998887666 999999
Q ss_pred HHHHHHHHHHH
Q 013217 387 IADFIHEGVEI 397 (447)
Q Consensus 387 l~~~i~~~l~~ 397 (447)
+.++|.+++..
T Consensus 415 ~~~~l~~~l~~ 425 (429)
T PRK06173 415 LTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 331
>PRK06541 hypothetical protein; Provisional
Probab=99.45 E-value=1.3e-10 Score=116.80 Aligned_cols=216 Identities=16% Similarity=0.148 Sum_probs=125.6
Q ss_pred HHHHHHhhhh---CCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhh-hccccccccCCCCCC-cccEEE
Q 013217 159 DMLEKTAILF---RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVT 227 (447)
Q Consensus 159 ~~l~~~~~~~---~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~-~~g~~~~~~~~~~~~-~~Di~~ 227 (447)
+.+++++... ++.+|++.+- +..+ ..+ +++|.++|+++|+++|+|++| ..|-........-.+ ..|+++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt 287 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT 287 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE
Confidence 6677777532 3445565531 2223 445 799999999999999999998 344322211000011 258886
Q ss_pred eCCCcccCC-C-CCceEEeecCCcchhhHHHHhhhcc---CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHH
Q 013217 228 TTTHKSLRG-P-RGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 302 (447)
Q Consensus 228 ~s~~K~l~G-p-~gG~i~~~~~~~~~~~~~~~i~~~~---~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~ 302 (447)
+.|.++| . +.|.+++++ ++.+.+.... ..+.+.+.+...+++..+.++.+..++ ..+++.++.+
T Consensus 288 --~gK~l~~G~~pigav~~~~------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~---~~~~~~~~g~ 356 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIASD------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREG---LLDHVRDNEP 356 (460)
T ss_pred --ecccccCCccceeEEEEcH------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHH
Confidence 4599864 2 456777776 5666554321 111122234444555555666655433 4677888888
Q ss_pred HHHHHHHHC-CcEeee--CCCCCeeEEecCCCC-----CCC--------HHHHHHHHhhcCeEEccCCCCCCCCCCCCCe
Q 013217 303 ALASRLVEL-GYKLVS--GGSDNHLVLVDLRPM-----GID--------GARVEKILDMASITLNKNSVPGDKSALVPGG 366 (447)
Q Consensus 303 ~l~~~L~~~-g~~~~~--~~~~~~~~~v~~~~~-----~~~--------~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 366 (447)
+|.+.|++. ...++. .+. ..+.-+.+... ..+ ...+.+.|.++||.+... + .....
T Consensus 357 ~l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~-----~g~~~ 428 (460)
T PRK06541 357 AFRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD--D-----RGDPV 428 (460)
T ss_pred HHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec--C-----CCCCE
Confidence 888888773 222221 111 22222333110 000 024556777899998531 1 11357
Q ss_pred EEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 367 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 367 iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
||++++...| ++|++++.+++++++..
T Consensus 429 lrl~Ppl~~t----~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 429 VQLAPPLISG----QEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEECCCCCC----HHHHHHHHHHHHHHHHH
Confidence 9999887777 99999999999999864
No 332
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.45 E-value=1e-10 Score=116.79 Aligned_cols=327 Identities=12% Similarity=0.054 Sum_probs=179.8
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC--
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 108 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~-- 108 (447)
.-.|.+.+++...+.+ +....... + ... ..+ ...+++.++++-.-+. ...++||++|+..++.....
T Consensus 61 h~~p~v~~ai~~~~~~-~~~~~~~~-~-~~~---~~~--~la~~l~~~~~~~~~~---v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDK-MSHVMFGG-F-THK---PAI--ELCQKLVKMTPNALDC---VFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHHh-cCCccccc-c-CCH---HHH--HHHHHHHhhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 3478888888776653 21111111 1 111 112 1234666666433221 24468999999888764321
Q ss_pred -----CC-CEEEEecCCCCcccCCCccc-cccc-cc--cccce--eEEEecccCCC--C-CCCCHHHHHHHhhhh--CCc
Q 013217 109 -----PH-DRIMGLDLPHGGHLSHGFMT-PKRR-VS--GTSIY--FESMPYRLDES--T-GLVDYDMLEKTAILF--RPK 171 (447)
Q Consensus 109 -----pg-d~Vl~~~~~~~~~~~~~~~~-~~~~-~~--~~g~~--~~~~~~~~~~~--~-~~id~~~l~~~~~~~--~~k 171 (447)
+| .+|+...-.|.|........ .... .. +.+.. ...++++...- . ..-|++++++++... +..
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~va 209 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIA 209 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEE
Confidence 23 67888876655442100000 0000 00 00000 01111111100 0 012567777777542 345
Q ss_pred EEEEcC--CCCCC-----CCChHHHHHHHHHhCCEEEEehhhhccccccccC--CCCCC-cccEEEeCCCcccCCC--CC
Q 013217 172 LIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRGP--RG 239 (447)
Q Consensus 172 lii~~~--~~~~~-----~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~--~~~~~-~~Di~~~s~~K~l~Gp--~g 239 (447)
+|++.+ +..++ ...+++|+++|++||+++|+|++| .|+...+.. ..-.+ ..|+++ +.|.|.|. ..
T Consensus 210 avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG~~p~ 286 (427)
T TIGR00508 210 AVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKALTGGYMTL 286 (427)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhhhcCcccc
Confidence 666663 33333 235789999999999999999998 665333321 10111 368887 46998543 34
Q ss_pred ceEEeecCCcchhhHHHHhhhcc-----CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcE
Q 013217 240 GMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 314 (447)
Q Consensus 240 G~i~~~~~~~~~~~~~~~i~~~~-----~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 314 (447)
+.++.++ ++.+.+.... ...+++ .+...+++..++++.+.+.+ ..+++.++.++|.+.|++.+..
T Consensus 287 ~a~~~~~------~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~ 356 (427)
T TIGR00508 287 SATVTTD------KVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAILLEGE---WQKQVSAIENQLKRELSPLRKN 356 (427)
T ss_pred eEEEEcH------HHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcC
Confidence 6677776 6766665321 111122 24555556566777665443 3677888888898888774321
Q ss_pred -eeeCCC-CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 315 -LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 315 -~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
.+.... ...+..+.+... .....+.+.|.++||.+... ...+|+.++..+| ++|++++.++++
T Consensus 357 ~~i~~vrg~G~~~~i~~~~~-~~~~~~~~~l~~~Gv~~~~~----------~~~l~~~ppl~~t----~~~id~~~~~l~ 421 (427)
T TIGR00508 357 PVVKDVRVLGAIGVVEMYKP-VNVEELQKKFVEQGVWIRPF----------GKLIYVMPPYIIT----TEQLQKLTAALI 421 (427)
T ss_pred CCEEeEeccccEEEEEECCc-cCHHHHHHHHHHCCeEEEec----------CCEEEEECCCCCC----HHHHHHHHHHHH
Confidence 111100 123334444322 23567888899999998531 2379999887777 999999999999
Q ss_pred HHHH
Q 013217 393 EGVE 396 (447)
Q Consensus 393 ~~l~ 396 (447)
+++.
T Consensus 422 ~~l~ 425 (427)
T TIGR00508 422 EALH 425 (427)
T ss_pred HHHh
Confidence 9885
No 333
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.45 E-value=2.6e-11 Score=117.91 Aligned_cols=273 Identities=18% Similarity=0.170 Sum_probs=141.0
Q ss_pred HHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHh---cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEe
Q 013217 71 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 146 (447)
Q Consensus 71 ~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al---~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 146 (447)
-+..+++++|.+. +|.....|+ .+-.+++++. -+.+++|+++...|+.+.... .....+.+++++.
T Consensus 115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~------~t~a~~~g~~iv~ 184 (429)
T PF02347_consen 115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVL------RTYAAPLGIEIVE 184 (429)
T ss_dssp HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHH------HHHCCHCCEEEEE
T ss_pred HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHH------HHhhhhCCeEEEE
Confidence 3478999999985 344444443 3333444443 344579999988777664211 0112334467777
Q ss_pred cccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-ccc
Q 013217 147 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 224 (447)
Q Consensus 147 ~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~D 224 (447)
++.+ +.+..| ++ ++..|++..||+-+ ..|+++|.+++|++|+++++ .+. .+.......|-. ++|
T Consensus 185 ~~~~-~~~~~d--------~~-~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad---~~aL~~l~~Pge~GAD 250 (429)
T PF02347_consen 185 VPLD-EDGTTD--------DD-DTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GAD---PNALGGLKSPGEYGAD 250 (429)
T ss_dssp E-BB-TTCSB---------ST-TEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGG---CCGCCTC--GGGGT-S
T ss_pred eccc-ccCCcc--------cc-CeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecC---HHHHhCcCChhhcCcc
Confidence 6666 345555 33 78889999888877 66899999999999999987 543 333334445544 699
Q ss_pred EEEeCCCcccC------CCCCceEEeecCCcchhhHHHHh----------------------------hhccCCCCCCCC
Q 013217 225 VVTTTTHKSLR------GPRGGMIFFKKDPVLGVELESAI----------------------------NNAVFPGLQGGP 270 (447)
Q Consensus 225 i~~~s~~K~l~------Gp~gG~i~~~~~~~~~~~~~~~i----------------------------~~~~~~~~~g~p 270 (447)
|++++ ||+|+ ||..|++.+++. +...+ ++-......+|.
T Consensus 251 I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~------l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn 323 (429)
T PF02347_consen 251 IVVGE-HQTFGIPMGFGGPGAGFFAVRED------LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTN 323 (429)
T ss_dssp EEEEC-CTTTT---CCC-S--EEEEE-GG------GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS
T ss_pred EEeeC-CCCCcccCCCCCCCeeeEEEhhh------hhhhCCCceecccccccccceeeeccccccccccccchhhhhhhh
Confidence 99776 88763 455599999984 22221 111001111221
Q ss_pred cHHHHHHHHH--HHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCe
Q 013217 271 HNHTIGGLAV--CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASI 348 (447)
Q Consensus 271 ~~~~~aal~~--al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI 348 (447)
..+.|+.+ -+..+..+|+++..++...++.++++.|.+. +.+......-+-.++.... .....++.+.....|+
T Consensus 324 --qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~gl 399 (429)
T PF02347_consen 324 --QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPFDNPFFFEFVVVFSK-DKEVEELLKRGIEGGL 399 (429)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECSSSSSBSSEEEEESS--HHHHHHHHTT----E
T ss_pred --HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCceeeeeecCC-cHHHHHHHHHHHhcCC
Confidence 12222221 2233445688999999999999999999885 2222211111112222222 1112223333344554
Q ss_pred EEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 349 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 349 ~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
... .+ ..+.+-+++...++ ++||+++++++
T Consensus 400 ~~~---~~------~~~~~li~~TE~~t----~edid~lv~~f 429 (429)
T PF02347_consen 400 NLR---YP------DDGALLICVTETRT----KEDIDRLVEAF 429 (429)
T ss_dssp EEG---GG-------SSEEEEE--TT------HHHHHHHHH--
T ss_pred Ccc---cc------CCCeEEEEccCCCC----HHHHHHHHhcC
Confidence 432 11 12378888888887 99999998864
No 334
>PRK06105 aminotransferase; Provisional
Probab=99.44 E-value=2.4e-10 Score=115.04 Aligned_cols=324 Identities=15% Similarity=0.106 Sum_probs=174.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-+|.|.+|+.+.+.+ ........++. . ..+....+++.+++..+.+. ....+||++|+.+++....
T Consensus 65 ~~p~i~~Ai~~q~~~-~~~~~~~~~~~--~----~~~~~lae~L~~~~p~~~~~---v~f~~SGseAve~AlKlar~~~~ 134 (460)
T PRK06105 65 SEQRLVEAAARQMKK-LPFYHTFSHKS--H----GPVIDLAEKLVAMAPVPMSK---VFFTNSGSEANDTVVKLVWYYNN 134 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCeecccccC--C----HHHHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 379999999888764 21111111111 1 11122335677776433221 2335899999998887532
Q ss_pred --C-C-CCEEEEecCCCCcccCCCccccccccccccc------------eeEEEecccCCC---CC-------CCCHHHH
Q 013217 108 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG-------LVDYDML 161 (447)
Q Consensus 108 --~-p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~---~~-------~id~~~l 161 (447)
. + ..+|+...-.|.|... + .+.+.+. .+..++++.... .+ ...++++
T Consensus 135 ~~g~t~r~~il~~~~~yHG~t~-~------a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 207 (460)
T PRK06105 135 ALGRPEKKKIISRQRGYHGVTI-A------SASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANEL 207 (460)
T ss_pred hcCCCCCcEEEEecCccCCcch-h------heeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHH
Confidence 1 2 3577877655433211 1 0111110 011122211000 00 0124667
Q ss_pred HHHhhh---hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhh-ccccccccCCCCCC-cccEEEeCC
Q 013217 162 EKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTTT 230 (447)
Q Consensus 162 ~~~~~~---~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~-~g~~~~~~~~~~~~-~~Di~~~s~ 230 (447)
++++.. .++.+||+.+- ...+ ..+ +++++++|++||+++|+|++|. .|-.....-..-.+ ..|+++++
T Consensus 208 e~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~g- 286 (460)
T PRK06105 208 EALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMS- 286 (460)
T ss_pred HHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeee-
Confidence 777642 24567777632 2223 334 7999999999999999999982 44332111000011 25888776
Q ss_pred CcccCCC--CCceEEeecCCcchhhHHHHhhhcc-----C-CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHH
Q 013217 231 HKSLRGP--RGGMIFFKKDPVLGVELESAINNAV-----F-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 302 (447)
Q Consensus 231 ~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~~-----~-~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~ 302 (447)
|.|+|. +.|.+++++ ++.+.+.... + .+.+.+.+....++..++++.+.+++ +.+++.+..+
T Consensus 287 -K~lggG~~P~~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~---l~~~v~~~g~ 356 (460)
T PRK06105 287 -KQLSSSYQPLSAVLMNE------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERD---LVGNAAERGA 356 (460)
T ss_pred -cccccCcccceEEEEcH------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHH
Confidence 999653 567888877 6766654311 1 11111234444444445777776543 4677777778
Q ss_pred HHHHHHHHC-CcEeeeC--CCCCeeEEecCCCCC-----CC-----HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEE
Q 013217 303 ALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRI 369 (447)
Q Consensus 303 ~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 369 (447)
+|.+.|++. ...++.. +. ..+.-+.+.... .+ ...+...+.++||.+... ...+|+
T Consensus 357 ~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~----------g~~i~l 425 (460)
T PRK06105 357 RLQARLRALADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM----------GDTLAF 425 (460)
T ss_pred HHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec----------CCEEEE
Confidence 888877663 1222211 11 111223332110 00 235666778899998531 237999
Q ss_pred ecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 370 GSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 370 g~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+++...+ ++|++++.+.+.+++...
T Consensus 426 ~Ppl~it----~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 426 CPPLIIT----AAQVDEMVDRFGRALDDV 450 (460)
T ss_pred ECCCccC----HHHHHHHHHHHHHHHHHH
Confidence 8886666 999999999999999754
No 335
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.43 E-value=4.2e-11 Score=110.22 Aligned_cols=309 Identities=17% Similarity=0.188 Sum_probs=184.3
Q ss_pred HHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCCC--CcccCCCccccccccccccceeEEEec---
Q 013217 73 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPH--GGHLSHGFMTPKRRVSGTSIYFESMPY--- 147 (447)
Q Consensus 73 ~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 147 (447)
+.+++.||.+. .+-++-|-.|-...+..++++|+.+...-+.. +.|+... +..+...|..++-++.
T Consensus 86 ~avkdifGfq~-----~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT----r~h~~~ng~~~~n~~~~ea 156 (471)
T COG3033 86 DAVKDIFGFQY-----TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTT----RGHIQINGATPRNVYVDEA 156 (471)
T ss_pred HHHHHhcCcee-----eeeccCCccHHHHHHHHHhhhccccCCccccccccceecch----hHHHHhcCCcccccccccc
Confidence 45678899864 24345666666666777777776655422221 2222211 0111122221111111
Q ss_pred ---ccC-CCCCCCCHHHHHHHhhhh---CCcEEEEcCCCCC--C----CCChHHHHHHHHHhCCEEEEehhhhcccccc-
Q 013217 148 ---RLD-ESTGLVDYDMLEKTAILF---RPKLIIAGASAYP--R----DFDYPRMRQIADAVGALLMMDMAHISGLVAA- 213 (447)
Q Consensus 148 ---~~~-~~~~~id~~~l~~~~~~~---~~klii~~~~~~~--~----~~~~~~i~~ia~~~g~~livD~a~~~g~~~~- 213 (447)
.++ |-.|.+|++.|++++++- +.-.|++.-++|+ + ..++++..+||++|+++++.|++..+--.+.
T Consensus 157 ~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFI 236 (471)
T COG3033 157 FDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFI 236 (471)
T ss_pred ccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhh
Confidence 111 123679999999999863 3445665533443 2 3467899999999999999999864432111
Q ss_pred -----ccCCCCC--------CcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhh--ccCCC--CCCCCcHHHHH
Q 013217 214 -----SVVADPF--------KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN--AVFPG--LQGGPHNHTIG 276 (447)
Q Consensus 214 -----~~~~~~~--------~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~--~~~~~--~~g~p~~~~~a 276 (447)
+...+.+ .++|-++.|.-|--..+-||+++.+++.- .++...+.. ....| .+|+..--.+.
T Consensus 237 k~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~--fDvy~~~~~~~V~~eG~~tYGgl~Grdme 314 (471)
T COG3033 237 KQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSF--FDVYEECRTLVVVQEGFPTYGGLAGRDME 314 (471)
T ss_pred hhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCccH--HHHHHHHHhheEeeccccccCcccchhHH
Confidence 1222222 36899999999976678899999998510 012222221 11111 24555556688
Q ss_pred HHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCC--C-----CCHHHHHH-HHhhcCe
Q 013217 277 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM--G-----IDGARVEK-ILDMASI 348 (447)
Q Consensus 277 al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~--~-----~~~~~~~~-~L~~~gI 348 (447)
++++.|.+..+.. |.+...++.++|.+.|.+.|++++.+ ...|-+++|.... . ..++.+.- +..+.||
T Consensus 315 alAvGL~e~~~~~---yl~~Rv~Qv~YL~~~l~~~GVpi~~p-aGGHavfvda~~~lphip~eqFpaqala~ely~e~Gi 390 (471)
T COG3033 315 ALAVGLREGVNFD---YLAHRVAQVQYLADGLEEAGVPIVQP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGI 390 (471)
T ss_pred HHHHHHHHhcCcH---HHHHHHHHHHHHHHHHHhcCCeeEec-CCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCe
Confidence 8999998877654 46667788899999999999987654 3467777774321 1 22334443 4467888
Q ss_pred EEcc-C--CCCCCC-CC----CCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHH
Q 013217 349 TLNK-N--SVPGDK-SA----LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 399 (447)
Q Consensus 349 ~v~~-~--~~p~~~-~~----~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~ 399 (447)
...- + ..+.+. .+ -...-+|+..+. |-.+.+.|+.+++.++++.++..
T Consensus 391 RavElG~~~~~rd~ktg~q~~~~~elvRltipR---rtYt~~HmD~V~~a~~~l~e~~~ 446 (471)
T COG3033 391 RAVELGSFSLGRDPKTGKQHPPPAELVRLTIPR---RTYTQTHMDFVIEAFKALKENAE 446 (471)
T ss_pred eeeeeeceecccCCCccccCCCchheeeEeccc---cccchhHHHHHHHHHHHHHhccc
Confidence 7542 2 122232 11 112359998664 33468999999999999888753
No 336
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.43 E-value=4.3e-10 Score=112.85 Aligned_cols=329 Identities=15% Similarity=0.087 Sum_probs=172.4
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|.|.+++...+.... +....++ ..+... ...+++.+++.....+. ....+||++|+.+++... ....
T Consensus 60 ~p~v~~Ai~~ql~~~~---~~~~~~~-~~~~~~----~lae~L~~~~p~~~~~~--v~f~~SGseA~e~AiklAr~~tgr 129 (445)
T PRK08593 60 PPRVVEAIKAQADKFI---HYTPAYM-YHEPLV----RLAKKLCELAPGDFEKR--VTFGLSGSDANDGIIKFARAYTGR 129 (445)
T ss_pred CHHHHHHHHHHHHhcc---Ccccccc-CCHHHH----HHHHHHHHhCCCCCCCE--EEECCchHHHHHHHHHHHHHhhCC
Confidence 6889988887775421 1111111 111112 22356777764321111 233589999999888743 2223
Q ss_pred CEEEEecCCCCcccCCCc-ccc-----ccccccccceeEEEecccCCC--CCCCC-------HHHHHHHhhh----hCCc
Q 013217 111 DRIMGLDLPHGGHLSHGF-MTP-----KRRVSGTSIYFESMPYRLDES--TGLVD-------YDMLEKTAIL----FRPK 171 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~-~~~-----~~~~~~~g~~~~~~~~~~~~~--~~~id-------~~~l~~~~~~----~~~k 171 (447)
.+|+...-.|.|...... ... +....-....+..++++-... ....+ ++++++++.. .++.
T Consensus 130 ~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA 209 (445)
T PRK08593 130 PYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVA 209 (445)
T ss_pred CeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceE
Confidence 567777655433310000 000 000000000112222221000 00111 2445444432 2566
Q ss_pred EEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccCC--CCCC-cccEEEeCCCcccC-CCCCce
Q 013217 172 LIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGM 241 (447)
Q Consensus 172 lii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~--~~~~-~~Di~~~s~~K~l~-Gp~gG~ 241 (447)
+|++.+. ...+ ..+ +++|+++|++||+++|+|++|. |+-..+... .-+. ..|++++ .|.++ |.++|+
T Consensus 210 avI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t~--gK~l~~G~p~ga 286 (445)
T PRK08593 210 CIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMSF--GKSLAGGMPMSA 286 (445)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEeee--cccccCCcccEE
Confidence 7777632 2223 233 7999999999999999999973 432222110 0011 2587755 59886 456788
Q ss_pred EEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeeeC-
Q 013217 242 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG- 318 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~- 318 (447)
+++++ ++.+.+....... +.+.+...+++..++++.+.++ +..+++.+..++|.+.|++. ...++..
T Consensus 287 v~~~~------~i~~~~~~~~~~~-T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v 356 (445)
T PRK08593 287 IVGRK------EIMESLEAPAHLF-TTGANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDV 356 (445)
T ss_pred EEEcH------HHHhhhccCCCCC-CCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 88887 6777664322112 2233445555555677776543 34666777777777777652 2222221
Q ss_pred -CCCCeeEEecCCCC---CC-C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 319 -GSDNHLVLVDLRPM---GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 319 -~~~~~~~~v~~~~~---~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
+..- +.-+.+... .. + ...+.+.|.++||.+... ....+|+.++..+| ++|++++.++
T Consensus 357 rG~Gl-~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------~~~~lr~~p~l~~t----~~~id~~~~~ 422 (445)
T PRK08593 357 RGYGL-SIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV---------AGNVLRFQPPLVIT----YEQLDTALNT 422 (445)
T ss_pred eccce-EEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc---------CCCEEEEECCCccC----HHHHHHHHHH
Confidence 1111 111222110 00 1 245677778899988431 12479999888777 9999999999
Q ss_pred HHHHHHHH
Q 013217 391 IHEGVEIT 398 (447)
Q Consensus 391 i~~~l~~~ 398 (447)
+++++...
T Consensus 423 l~~~l~~~ 430 (445)
T PRK08593 423 IEQAFTAL 430 (445)
T ss_pred HHHHHHHH
Confidence 99999754
No 337
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.43 E-value=3.7e-10 Score=112.87 Aligned_cols=328 Identities=14% Similarity=0.063 Sum_probs=168.5
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCC-CCccceeeecCCcHHHHHHHHHHh--c
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI--L 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs~a~~~~~~al--~ 107 (447)
+-.|.|.+++.+.+.... +...... ..+ ..+ +. .+++.+++... .+. ....+||++|+.+++.-. .
T Consensus 49 h~~p~v~~a~~~ql~~~~---~~~~~~~-~~~--~~~-~l-a~~l~~~~p~~~~~~---v~f~~sGseA~e~AlklAr~~ 117 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFT---HTCFMVT-PYE--GYV-AL-AEKLNRIAPGSGPKK---SVFFNSGAEAVENAVKIARSY 117 (420)
T ss_pred CCCHHHHHHHHHHHHhcc---Ccccccc-CCh--HHH-HH-HHHHHHhCCCCCCCE---EEEeCCcHHHHHHHHHHHHHh
Confidence 347899999888776421 1111000 111 112 12 24566665321 121 244589999999887643 2
Q ss_pred CCCCEEEEecCCCCcccCCCccc-------cccccccccceeEEEecccCCC--------CCCCCHHHHHHHhh----hh
Q 013217 108 KPHDRIMGLDLPHGGHLSHGFMT-------PKRRVSGTSIYFESMPYRLDES--------TGLVDYDMLEKTAI----LF 168 (447)
Q Consensus 108 ~pgd~Vl~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~--------~~~id~~~l~~~~~----~~ 168 (447)
....+|+...-.|.|.-. +... ........-.....++++.... ...-+++.+++.+. ..
T Consensus 118 tgr~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T TIGR00700 118 TGRPGVVAFDHGFHGRTN-MTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGAN 196 (420)
T ss_pred cCCCcEEEECCCcCCCcH-HHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCC
Confidence 234568777655433310 0000 0000000000011122221000 00012456666653 12
Q ss_pred CCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccCC--CCCC-cccEEEeCCCcccC-CCC
Q 013217 169 RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 238 (447)
Q Consensus 169 ~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~--~~~~-~~Di~~~s~~K~l~-Gp~ 238 (447)
++.+||+.+- ..++ ..+ +++|.++|++||+++|+|+++ .|+...+... ...+ ..|+++ ++|.++ |.+
T Consensus 197 ~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G~p 273 (420)
T TIGR00700 197 NVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ-TGFARTGAMFACEHEGPEPDLIT--TAKSLADGLP 273 (420)
T ss_pred cEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc-cCCcccchhHHHhhcCCCCCEEE--eeccccCCcc
Confidence 4567777632 1222 222 799999999999999999996 5553333110 0111 357776 569984 677
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CC-c
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-Y 313 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g-~ 313 (447)
.|++++++ ++.+.+.......+.++ +....++..++++.+.+.++. ++..+..+.+.+.|++ .+ +
T Consensus 274 ig~v~~~~------~i~~~~~~~~~~~T~~~-~pl~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~~~ 343 (420)
T TIGR00700 274 LSGVTGRA------EIMDAPAPGGLGGTYAG-NPLACAAALAVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDPRI 343 (420)
T ss_pred eEEEEecH------HHHhhcCCCCcCCCCCc-CHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCE
Confidence 79999987 67776654333233333 344444444567665554543 3344444445555544 22 2
Q ss_pred EeeeCCCCCeeEEecCCCC--CC-C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 314 KLVSGGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 314 ~~~~~~~~~~~~~v~~~~~--~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
..+.+ . ..+.++.+... .. + ...+.+.+.++||.+. |+.. + ...+|++++...+ ++++++.
T Consensus 344 ~~vrg-~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----p~~~--f-~~~lRl~p~l~~~----~~~l~~~ 410 (420)
T TIGR00700 344 GDVRG-L-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLL----TCGM--F-GNIIRFLPPLTIG----DELLSEG 410 (420)
T ss_pred EEeec-c-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEe----ccCC--C-CCEEEEECCCCcC----HHHHHHH
Confidence 22222 2 23344544221 01 1 2345555678999984 3221 1 2589999776555 8999999
Q ss_pred HHHHHHHHH
Q 013217 388 ADFIHEGVE 396 (447)
Q Consensus 388 ~~~i~~~l~ 396 (447)
++.|.+++.
T Consensus 411 ~~~l~~~l~ 419 (420)
T TIGR00700 411 LDILCAILA 419 (420)
T ss_pred HHHHHHHhh
Confidence 999988764
No 338
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=4.4e-10 Score=112.67 Aligned_cols=327 Identities=17% Similarity=0.103 Sum_probs=169.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|.|.+++.+.+.+......+ .+. + ..+....+++.+++.....+. ...++||++|+.+++... ....
T Consensus 72 ~p~v~~Ai~~ql~~~~~~~~~--~~~--~----~~~~~lAe~L~~~~p~~~~~~--v~f~~SGsEA~e~AlklAr~~tgr 141 (441)
T PRK05769 72 HPKVVKAVKEQAEKFLHYSLT--DFY--Y----EPAVELAERLVEIAPGGFEKK--VFFTNSGTESNEAAIKIARYHTGR 141 (441)
T ss_pred CHHHHHHHHHHHHhccCccCc--ccC--C----HHHHHHHHHHHHhCCCCCCCE--EEECCchHHHHHHHHHHHHHHhCC
Confidence 588888888777642100110 111 1 122223356666664211111 234689999999887643 2234
Q ss_pred CEEEEecCCCCcccC-CCcc-----ccccccccccceeEEEecccC---C---CCC----CCCHHHHHH-Hhh----hhC
Q 013217 111 DRIMGLDLPHGGHLS-HGFM-----TPKRRVSGTSIYFESMPYRLD---E---STG----LVDYDMLEK-TAI----LFR 169 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~-~~~~-----~~~~~~~~~g~~~~~~~~~~~---~---~~~----~id~~~l~~-~~~----~~~ 169 (447)
++|+...-.|.|.-. .... .......-....+..++++.. + .+. .-+.+.+++ +++ ..+
T Consensus 142 ~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ 221 (441)
T PRK05769 142 KYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEE 221 (441)
T ss_pred CeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCc
Confidence 678877655433310 0000 000000000001122222110 0 000 012344555 322 124
Q ss_pred CcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccC-CCCC
Q 013217 170 PKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRG 239 (447)
Q Consensus 170 ~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~-Gp~g 239 (447)
+.+|++.+- ...+ ..+ +++|.++|++||+++|+|++|. |+...+.. . ..++ ..|++++| |.++ |.+.
T Consensus 222 iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~~--K~l~~G~p~ 298 (441)
T PRK05769 222 VAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITLA--KAIAGGLPL 298 (441)
T ss_pred eEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEEc--ccccCCccc
Confidence 566776521 1222 455 8999999999999999999985 54333321 0 1111 25888754 9885 4556
Q ss_pred ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC--cEeee
Q 013217 240 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS 317 (447)
Q Consensus 240 G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~ 317 (447)
|++++++ ++.+.... ...++.++ +...+++..++++.+.+ +..+++.+..++|++.|++.. +.++.
T Consensus 299 gav~~~~------~i~~~~~~-~~~~T~~g-~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~ 366 (441)
T PRK05769 299 GAVIGRA------ELMFLPPG-SHANTFGG-NPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIG 366 (441)
T ss_pred EEEEEeh------hhhhcCCC-CCCCCCCc-CHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 8888887 55443321 12222232 44445555556776643 456777778888888886632 22222
Q ss_pred CCC-CCeeEEecCCCC-C-C---CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 318 GGS-DNHLVLVDLRPM-G-I---DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 318 ~~~-~~~~~~v~~~~~-~-~---~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
... ...+.-+.+... . - ....+.+.|.++||.+... ....+|++++...| ++|++++.+++
T Consensus 367 ~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~---------~~~~lr~~p~l~~t----~~~id~~~~~l 433 (441)
T PRK05769 367 DVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGA---------GKSAIRIIPPLIIT----EEEADIGLEIL 433 (441)
T ss_pred eeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecC---------CCCEEEEeCCCCCC----HHHHHHHHHHH
Confidence 111 112222333211 0 0 1234666777899998421 13479999887777 99999999999
Q ss_pred HHHHHH
Q 013217 392 HEGVEI 397 (447)
Q Consensus 392 ~~~l~~ 397 (447)
++++..
T Consensus 434 ~~~l~~ 439 (441)
T PRK05769 434 EEAIKE 439 (441)
T ss_pred HHHHHH
Confidence 998863
No 339
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.42 E-value=6.5e-10 Score=110.82 Aligned_cols=320 Identities=13% Similarity=0.102 Sum_probs=168.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc--CC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--~p 109 (447)
-.|.|.+++.+.+.+....+. ..+ ... ...+++.++++...+. ....+||++|+..++.... ..
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~~-------~~~--~~~--~la~~L~~~~~~~~~~---v~f~~SGsEA~e~AiklAr~~tg 135 (433)
T PRK00615 70 SHPKICDAIQQGAERGTSYGL-------TSE--QEI--LFAEELFSYLGLEDHK---IRFVSSGTEATMTAVRLARGITG 135 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------CCH--HHH--HHHHHHHHhCCCCcCE---EEEeCchHHHHHHHHHHHHHhhC
Confidence 378888888887764211111 111 111 2234666666543221 2345899999998876442 22
Q ss_pred CCEEEEecCCCCcccCCCcccccccccccccee----EEE-ecccCCCC---CCCCHHHHHHHhhhh--CCcEEEEcCC-
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF----ESM-PYRLDEST---GLVDYDMLEKTAILF--RPKLIIAGAS- 178 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~-~~~~~~~~---~~id~~~l~~~~~~~--~~klii~~~~- 178 (447)
..+|+...-.|.|.-.... . .+...+... ... +-...+.. ..-|++++++.+..+ ++.+||+.+-
T Consensus 136 r~~ii~~~~~yHG~td~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~ 211 (433)
T PRK00615 136 RSIIIKFLGCYHGHADTLL--Q--GISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPIC 211 (433)
T ss_pred CCEEEEEcCccCCCCcccC--c--ccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCC
Confidence 3577776655444210000 0 111111000 000 00000000 123788999888643 3456666521
Q ss_pred CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC--CCCCC-cccEEEeCCCcccC-CCCCceEEeecCCc
Q 013217 179 AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 249 (447)
Q Consensus 179 ~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~--~~~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~ 249 (447)
...+ ..+ +++|.++|++||+++|+|++| .|+ ..+.. ..-++ ..|++++ .|.|+ |.++|++++++
T Consensus 212 ~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~-R~G~~ga~~~~gv~PDi~~~--gK~lggG~p~~av~~~~--- 284 (433)
T PRK00615 212 ANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGF-RVAQGGAAAIYHVKPDITVY--GKILGGGLPAAAVVAHK--- 284 (433)
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccc-cccHhHHHHhcCCCCCeEEE--cccccCCcceeeeeecH---
Confidence 1222 333 469999999999999999998 565 22210 00011 2588764 69996 44578888888
Q ss_pred chhhHHHHhhhc--cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CCcEeeeCCCCCe
Q 013217 250 LGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNH 323 (447)
Q Consensus 250 ~~~~~~~~i~~~--~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~ 323 (447)
++.+.+... .+.+..-+.++..+++..++++.+.++. ..+++.++.++|.+.|++ .|+.+..... ..
T Consensus 285 ---~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~-G~ 357 (433)
T PRK00615 285 ---SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRY-GS 357 (433)
T ss_pred ---HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEee-ce
Confidence 677766431 1111111235555666666777765443 356666667777665544 4554322111 11
Q ss_pred eEEecCCCCC---C------C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 324 LVLVDLRPMG---I------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 324 ~~~v~~~~~~---~------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
++-+.+.... + + ...+.+.|.++||.+.....| ...+ ...++ ++|++++++++
T Consensus 358 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-------~~~l----s~~ht----~~did~~~~a~ 422 (433)
T PRK00615 358 MFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFE-------ASFL----SSAHS----MENLDYAQNVL 422 (433)
T ss_pred EEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccc-------ccce----ecCCC----HHHHHHHHHHH
Confidence 2222332111 0 1 124667778899998532111 0112 22334 99999999999
Q ss_pred HHHHHHH
Q 013217 392 HEGVEIT 398 (447)
Q Consensus 392 ~~~l~~~ 398 (447)
.+++...
T Consensus 423 ~~~~~~~ 429 (433)
T PRK00615 423 IDSLEKV 429 (433)
T ss_pred HHHHHHH
Confidence 9998754
No 340
>PRK06062 hypothetical protein; Provisional
Probab=99.41 E-value=4.8e-10 Score=112.66 Aligned_cols=319 Identities=13% Similarity=0.068 Sum_probs=168.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|.|.+++.+.+..- ....+ .+ . .+ ......+++.+++....+. ....+||++|+.+++... ....
T Consensus 71 ~p~v~~Ai~~q~~~~-~~~~~--~~-~-~~----~~~~lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~tgr 138 (451)
T PRK06062 71 HPKVVAAIQEQAARL-CTVAP--AH-A-ND----ARSEAARLIAERAPGDLSK---VFFTNGGADANEHAVRMARLHTGR 138 (451)
T ss_pred CHHHHHHHHHHHHhc-CCcCC--cc-C-CH----HHHHHHHHHHHhCCCCCCE---EEEcCChHHHHHHHHHHHHHhhCC
Confidence 688888887776541 11111 11 1 11 1112234566665422221 234689999999887653 2234
Q ss_pred CEEEEecCCCCcccCCCccccccccccccc-----------eeEEEecccCCC-CC--CCC-------HHHHHHHhhh--
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRLDES-TG--LVD-------YDMLEKTAIL-- 167 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~-~~--~id-------~~~l~~~~~~-- 167 (447)
.+|+...-.|.|... + .+...+. .+..++++.... .+ .-| +++++++++.
T Consensus 139 ~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 211 (451)
T PRK06062 139 PKVLSAYRSYHGGTG-S------AINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEG 211 (451)
T ss_pred ceEEEEeCCCCCCCH-H------HHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcC
Confidence 678877655433310 0 0001110 011111111000 00 012 6777887753
Q ss_pred -hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCCC
Q 013217 168 -FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP 237 (447)
Q Consensus 168 -~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~Gp 237 (447)
.++.+|++.+- ...+ ..+ +++++++|++||+++|+|++|. |+--.+.. . .-++ ..|+++++ |.|+|.
T Consensus 212 ~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~g--K~lggG 288 (451)
T PRK06062 212 PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITFA--KGVNSG 288 (451)
T ss_pred CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeeec--hhhhcC
Confidence 23566777631 2223 445 7999999999999999999984 43222211 0 0011 35888765 999752
Q ss_pred --CCceEEeecCCcchhhHHHHhhhcc-CC-CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHH-HHHHHHHHHC-
Q 013217 238 --RGGMIFFKKDPVLGVELESAINNAV-FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC-RALASRLVEL- 311 (447)
Q Consensus 238 --~gG~i~~~~~~~~~~~~~~~i~~~~-~~-~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~-~~l~~~L~~~- 311 (447)
+.|.+++++ ++.+.+.... .. +++++ +...+++..++++.+.++++ .++..+.. .+|.+.|++.
T Consensus 289 ~~Pigav~~~~------~i~~~~~~~~~~~~~T~~g-npl~~Aaa~a~L~~l~~~~l---~~~~~~~G~~~l~~~L~~l~ 358 (451)
T PRK06062 289 YVPLGGVAISE------AIAATFADRPYPGGLTYSG-HPLACAAAVATINAMEEEGI---VENAARIGAEVLGPGLRELA 358 (451)
T ss_pred CcCcEEEEEcH------HHHHHhccCCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHH
Confidence 456666666 6766664321 12 22222 45556665667777765443 44444444 3555555541
Q ss_pred -CcEeee--CCCCCeeEEecCCCC-----CC--------CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccc
Q 013217 312 -GYKLVS--GGSDNHLVLVDLRPM-----GI--------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 375 (447)
Q Consensus 312 -g~~~~~--~~~~~~~~~v~~~~~-----~~--------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~ 375 (447)
.+..+. .+... +.-+.+... .. ....+.+.|.++||.+.. + ...+|+.++..+
T Consensus 359 ~~~~~v~~vrG~Gl-~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~---~-------~~~lrl~ppl~~ 427 (451)
T PRK06062 359 ERHPSVGEVRGLGV-FWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV---N-------GNRIHVVPPCTV 427 (451)
T ss_pred hcCCcEEeEecccc-EEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee---c-------CCEEEEECCccC
Confidence 122211 11112 122222110 00 123577778889998742 1 247999988777
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 013217 376 TRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 376 ~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+ ++|++++.+++++++...
T Consensus 428 t----~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 428 T----EDEVREGLAILDAALAVA 446 (451)
T ss_pred C----HHHHHHHHHHHHHHHHHh
Confidence 7 999999999999998754
No 341
>PRK07046 aminotransferase; Validated
Probab=99.41 E-value=5.6e-10 Score=112.06 Aligned_cols=314 Identities=14% Similarity=0.104 Sum_probs=169.3
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|.|.+++.+.+......+.+ + ..+....+++.++++.+. ...++|||+|+..++... ....
T Consensus 93 ~p~i~~Av~~q~~~~~~~~~~-------~----~~~~~lAe~l~~~~~~~~-----v~F~nSGtEA~e~AlrlAR~~TGr 156 (453)
T PRK07046 93 PAPVARALAEQARRGLTTMLP-------S----EDAAWVGEELARRFGLPY-----WQVATTATDANRFVLRWARAVTGR 156 (453)
T ss_pred CHHHHHHHHHHHHhCCCCCCC-------C----HHHHHHHHHHHHHhCCCE-----EEEECCHHHHHHHHHHHHHHhhCC
Confidence 588888888777653211111 1 222233456777776443 233689999998887654 2234
Q ss_pred CEEEEecCCCCcccCCCccccc--cc---ccccccee----EEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC-CC
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPK--RR---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AY 180 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~--~~---~~~~g~~~----~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~-~~ 180 (447)
++|+...-.|.|.......... .. -...|... .+..++ .-|++++++.+...+..+||+.+- .+
T Consensus 157 ~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~vAavi~EPi~g~ 230 (453)
T PRK07046 157 PKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------FNDLAALEAALADGDVAAVLAEPAMTN 230 (453)
T ss_pred CEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------CCCHHHHHHHhCCCCeEEEEECCCCCC
Confidence 6788877555443100000000 00 00001000 011111 138899998886446677887632 22
Q ss_pred CC-CC-C---hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEeCCCcccC-CCCCceEEeecCCcchhh
Q 013217 181 PR-DF-D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVE 253 (447)
Q Consensus 181 ~~-~~-~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~~~~~ 253 (447)
.+ .. + +++++++|+++|+++|+|+++..+.-..+.. .-++ ..|++++ .|.++ |.+.|.+.+++ +
T Consensus 231 ~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~-~~~gv~PDi~t~--gK~lggG~Pi~av~g~~------~ 301 (453)
T PRK07046 231 IGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT-RAHGLEPDFLVV--GKPIAGGVPCAVYGFSA------E 301 (453)
T ss_pred CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh-HHhCCCccceee--hhhhcCCCcceeeeehH------H
Confidence 23 22 2 6899999999999999999985221111111 1011 2588876 59986 44458888887 6
Q ss_pred HHHHhhhccC---CC---CCC--CCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CCcEeeeCCCC
Q 013217 254 LESAINNAVF---PG---LQG--GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSD 321 (447)
Q Consensus 254 ~~~~i~~~~~---~~---~~g--~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~ 321 (447)
+.+.+..... .+ ..+ +.++..+++..+.++.+.+++ ..++..+..++|.+.|++ .++.....+..
T Consensus 302 i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G 378 (453)
T PRK07046 302 LAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRAVIARHGLPWHVTRVG 378 (453)
T ss_pred HHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7776653110 01 112 234455555556777665544 355666666777776654 34332111111
Q ss_pred CeeEEecCCC-CC---------CCH---HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHH
Q 013217 322 NHLVLVDLRP-MG---------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 388 (447)
Q Consensus 322 ~~~~~v~~~~-~~---------~~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~ 388 (447)
.. +.+.+.. .. .+. ..+...|.++||.+.. . ...++++++ ++ ++|+++++
T Consensus 379 ~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~------~~~~~~~p~--~t----~~did~~~ 441 (453)
T PRK07046 379 AR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP----F------HNMMLVCPA--TT----AADVDRLV 441 (453)
T ss_pred cE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec----c------cCcEEEeCC--CC----HHHHHHHH
Confidence 22 2222211 00 011 2345566778998842 1 124777753 44 99999999
Q ss_pred HHHHHHHHH
Q 013217 389 DFIHEGVEI 397 (447)
Q Consensus 389 ~~i~~~l~~ 397 (447)
+++.+++..
T Consensus 442 ~~~~~~l~~ 450 (453)
T PRK07046 442 AAFDACLGE 450 (453)
T ss_pred HHHHHHHHH
Confidence 999998864
No 342
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.40 E-value=4.8e-13 Score=125.73 Aligned_cols=243 Identities=18% Similarity=0.240 Sum_probs=55.1
Q ss_pred CCCCHHHHHHHhhhhhc----cC--CCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHH
Q 013217 30 NFTSRAVMEAVGSCLTN----KY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 103 (447)
Q Consensus 30 n~~~~~v~~a~~~~~~~----~~--~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~ 103 (447)
.++++++.+++.....+ .| ..|-.|.|| +.++ +.+++++|++.. +.+.+.+.|++.++
T Consensus 16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~L~l 79 (367)
T PF03841_consen 16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVLLAL 79 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc-------cccc----cccccccccccc-----cccccccccccccc
Confidence 35678888887655433 11 124444443 2344 567889999864 22355567777777
Q ss_pred HHhcCCCCEEEEecC---CCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC
Q 013217 104 TAILKPHDRIMGLDL---PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASA 179 (447)
Q Consensus 104 ~al~~pgd~Vl~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~-~~~ 179 (447)
.++. +|.+|++.-- +.||.+... ..+..+|. +.+.++.. ..-.+++.++++.+ +|.+++-. .||
T Consensus 80 ~~la-~~~EvIvsRGelVeiGgsFRip-----~vm~~sGa--~lvEVGtt---N~t~~~Dye~AI~e-~Ta~ll~Vh~Sn 147 (367)
T PF03841_consen 80 NTLA-KGKEVIVSRGELVEIGGSFRIP-----DVMRQSGA--RLVEVGTT---NRTHLSDYEKAITE-NTAALLKVHTSN 147 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-cccccccccccccccccccccc-----cccccccc--cccccccc---cccccccccccccc-cccccccccccc
Confidence 7765 5667776432 234432211 23445554 55565542 34567788889988 88887554 466
Q ss_pred CC-----CCCChHHHHHHHHHhCCEEEEehhhhcccccc----ccC--CC---CC-CcccEEEeCCCcccCCCCCceEEe
Q 013217 180 YP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----SVV--AD---PF-KYCDVVTTTTHKSLRGPRGGMIFF 244 (447)
Q Consensus 180 ~~-----~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~----~~~--~~---~~-~~~Di~~~s~~K~l~Gp~gG~i~~ 244 (447)
|- ...+++++.++|++||+++++|.. +|.... ++. ++ -+ .++|+++||+.|.|+||+.|+|++
T Consensus 148 ~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~G 225 (367)
T PF03841_consen 148 FRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVG 225 (367)
T ss_dssp -------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEE
T ss_pred cccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEe
Confidence 63 256899999999999999999986 443321 111 11 12 269999999999999999999999
Q ss_pred ecCCcchhhHHHHhhhccC-CCCCCCCcHHHHHHHHHHHHHhcChh-----------HHHHHHHHHHHHHHHHHHHHH
Q 013217 245 KKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~-~~~~g~p~~~~~aal~~al~~~~~~~-----------~~~~~~~~~~~~~~l~~~L~~ 310 (447)
++ ++++++++... ..+ -..-..++++.++++....++ +..-.+.+.++++.|...|..
T Consensus 226 kk------~lI~~lk~~pl~Ral--rvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 226 KK------ELIEKLKKHPLGRAL--RVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp EH------HHHHHHHHHHHTTT---B--HHHHHHHHHHHHH-------------------------------------
T ss_pred CH------HHHHHHhhCCCcceE--eeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 99 78888765311 111 113356788888887655311 122234455556666666655
No 343
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=7.3e-10 Score=110.36 Aligned_cols=211 Identities=15% Similarity=0.079 Sum_probs=128.6
Q ss_pred HHHHHHhhhhCCcEEEEcCC--CCCC-----CCChHHHHHHHHHhCCEEEEehhhhccccccccC-CC-CCC-cccEEEe
Q 013217 159 DMLEKTAILFRPKLIIAGAS--AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTT 228 (447)
Q Consensus 159 ~~l~~~~~~~~~klii~~~~--~~~~-----~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~-~~~-~~Di~~~ 228 (447)
+.+++++.+ ++.+||+.+- ..++ ...+++++++|++||+++|+|++| .|+-..+.. .. ..+ ..|++++
T Consensus 191 ~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t~ 268 (422)
T PRK05630 191 RSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMCV 268 (422)
T ss_pred HHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeeee
Confidence 344555543 6778887742 2222 223689999999999999999998 555322211 00 011 2588855
Q ss_pred CCCcccCC--CCCceEEeecCCcchhhHHHHhhhc-----cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q 013217 229 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 301 (447)
Q Consensus 229 s~~K~l~G--p~gG~i~~~~~~~~~~~~~~~i~~~-----~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~ 301 (447)
.|.++| +++|++++++ ++.+.+... ...+.+-+.+...+++..++++.+.++++ .+++.+..
T Consensus 269 --gK~l~gG~~p~~av~~~~------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~---~~~~~~~g 337 (422)
T PRK05630 269 --GKALTGGFMSFAATLCTD------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMW---RKQVKRIE 337 (422)
T ss_pred --echhhcCccccceeeccH------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcH---HHHHHHHH
Confidence 599954 5778888887 676665421 11111112355566666667887765433 45666777
Q ss_pred HHHHHHHHHC-CcEeeeCCC-CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCC
Q 013217 302 RALASRLVEL-GYKLVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 379 (447)
Q Consensus 302 ~~l~~~L~~~-g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~ 379 (447)
++|.+.|++. ....+.+-. ...+.-+.+... .+...+.+.+.++||.+... ...+|+.++...+
T Consensus 338 ~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~-~~~~~~~~~~~~~Gl~~~~~----------g~~l~~~PpL~it--- 403 (422)
T PRK05630 338 AELIAGLSPLAHLPGVADVRVLGAIGVVEMEQP-VDMEEATQAAVDHGVWLRPF----------GRLVYVMPPYITT--- 403 (422)
T ss_pred HHHHHHHHHhhcCCCeeeeeccccEEEEEECCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEECCccCC---
Confidence 7777777642 111122100 123333444321 13457778888999998531 2479998877666
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 013217 380 SEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 380 ~~~di~~l~~~i~~~l~~ 397 (447)
++|++++.+++++++..
T Consensus 404 -~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 -SEQIAQICAALAAAVKA 420 (422)
T ss_pred -HHHHHHHHHHHHHHHhc
Confidence 99999999999998863
No 344
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.38 E-value=1.3e-09 Score=109.97 Aligned_cols=325 Identities=15% Similarity=0.102 Sum_probs=167.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-.|.|.+++.+.+.+.. +.+...+. . ..+....+++.+++.....+. ...++||++|+.+++... ...
T Consensus 71 ~~p~v~~ai~~q~~~~~---~~~~~~~~-~----~~~~~la~~L~~~~p~~~~~~--v~f~~sGseA~e~AlklAr~~tg 140 (451)
T PRK06918 71 SHPKVKEALHKQVDQYI---HTGFNVMM-Y----EPYIELAEKLAALAPGSFDKK--VLFLNSGAEAVENAVKIARKYTK 140 (451)
T ss_pred CCHHHHHHHHHHHHhcc---Cccccccc-c----HHHHHHHHHHHHhCCCCCCCE--EEEcCCcHHHHHHHHHHHHHHhC
Confidence 36888888887776421 11110000 1 112223356777764321111 244689999999887643 223
Q ss_pred CCEEEEecCCCCcccCCCccccccccccccc-------------eeEEEecccCC--CCCCCC-------HHHHHHHhh-
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVD-------YDMLEKTAI- 166 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~~id-------~~~l~~~~~- 166 (447)
..+|+...-.|.|... + .+.+.+. .+..++++... ..+..+ .+.+++.+.
T Consensus 141 r~~ii~~~~~yHG~t~-~------~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (451)
T PRK06918 141 RQGIISFSRGFHGRTL-M------TMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS 213 (451)
T ss_pred CCcEEEECCCcCccch-h------hhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh
Confidence 4568777655433311 0 0011110 01112222110 001100 123343332
Q ss_pred ---hhCCcEEEEcCC-CCCC--C--CC-hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----cccEEEeCCCcc
Q 013217 167 ---LFRPKLIIAGAS-AYPR--D--FD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKS 233 (447)
Q Consensus 167 ---~~~~klii~~~~-~~~~--~--~~-~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----~~Di~~~s~~K~ 233 (447)
..++.+|++.+. ..++ . .+ +++|.++|++||+++|+|+++ .|+...+.. .++. ..|++ +++|.
T Consensus 214 ~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~-tg~gr~g~~-~a~~~~~v~pDi~--t~sK~ 289 (451)
T PRK06918 214 EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ-TGFARTGKY-FAIEHFDVVPDLI--TVSKS 289 (451)
T ss_pred hcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCcCccCce-ehhHhcCCCCCEE--eeehh
Confidence 224566776532 1222 1 12 789999999999999999996 555433321 1111 25755 56799
Q ss_pred cC-CCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-
Q 013217 234 LR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL- 311 (447)
Q Consensus 234 l~-Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 311 (447)
++ |.+.|++++++ ++.+.+......++.++ +....++..++++.+.+.++.+ ++.+..+.+.+.|++.
T Consensus 290 l~~G~pig~v~~~~------~i~~~~~~~~~~~T~~g-~~l~~aaa~a~l~~i~~~~~~~---~~~~~g~~l~~~l~~l~ 359 (451)
T PRK06918 290 LGAGVPISGVIGRK------EIMDESAPGELGGTYAG-SPLGCAAALAVLDIIEKENLND---RAIELGKVVMNRFEEMK 359 (451)
T ss_pred hcCCCccEEEEEcH------HHHhccCCCCcCcCCCc-CHHHHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHHHHH
Confidence 84 66779999987 67776654332223333 3444444444666665444433 3444445555555441
Q ss_pred -CcEeee--CCCCCeeEEecCCCC--CC----CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHH
Q 013217 312 -GYKLVS--GGSDNHLVLVDLRPM--GI----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 382 (447)
Q Consensus 312 -g~~~~~--~~~~~~~~~v~~~~~--~~----~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~ 382 (447)
...++. .+....+.|....+. .. ....+.+.|.++||.+.. +.. + .+.+|++++...+ ++
T Consensus 360 ~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~----~~~--~-~~~lrl~p~l~~t----~~ 428 (451)
T PRK06918 360 NKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLS----AGT--Y-GNVIRVLMPLVIT----DE 428 (451)
T ss_pred hhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEee----cCC--C-CCEEEEECCCccC----HH
Confidence 222211 122233333221110 11 134456666789999843 211 1 2579999876555 99
Q ss_pred HHHHHHHHHHHHHHHH
Q 013217 383 EFVAIADFIHEGVEIT 398 (447)
Q Consensus 383 di~~l~~~i~~~l~~~ 398 (447)
+++++.++|.+++...
T Consensus 429 ~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 429 QLEEGLTIIEESLQAC 444 (451)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998754
No 345
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.38 E-value=2e-09 Score=108.14 Aligned_cols=322 Identities=11% Similarity=0.068 Sum_probs=174.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.|.+++...+.+ ....... . +. .+ ..+ ...+++.++++...+. ...++||++|+.+++....
T Consensus 71 ~~p~v~~Ai~~ql~~-~~~~~~~-~-~~-~~--~~~--~lAe~L~~~~p~~~~~---v~f~~sGseAve~AlKlA~~~~~ 139 (453)
T PRK06943 71 ANPRINAALKDQLDT-LEHAMLA-G-CT-HE--PAI--ELAERLAALTGGTLGH---AFFASDGASAVEIALKMSFHAWR 139 (453)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc-c-cC-CH--HHH--HHHHHHHHhCCCCCCE---EEEeCCCHHHHHHHHHHHHHHHH
Confidence 478888888877754 1111110 0 11 11 112 2235666666533221 2335899999998876541
Q ss_pred ---CC-CCEEEEecCCCCcccCCCccccccccccccc------------eeEEEecccCCCC--C-------CCCHHHHH
Q 013217 108 ---KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--G-------LVDYDMLE 162 (447)
Q Consensus 108 ---~p-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~--~-------~id~~~l~ 162 (447)
.+ ..+|+...-.|.|... + .+.+++. .+..++++..... . .-|+++++
T Consensus 140 ~rg~~~r~~Ii~~~~~yHG~t~-g------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 212 (453)
T PRK06943 140 NRGRGDKREFVCLANGYHGETI-G------ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVR 212 (453)
T ss_pred HhCCCCCCEEEEECCCcCCCcH-H------hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHH
Confidence 12 3678887766544310 0 0011110 0122222211000 0 11357777
Q ss_pred HHhhh--hCCcEEEEcC--CCCCCC--CC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CC-CCCC-cccEEEeCC
Q 013217 163 KTAIL--FRPKLIIAGA--SAYPRD--FD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTT 230 (447)
Q Consensus 163 ~~~~~--~~~klii~~~--~~~~~~--~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~-~~~~-~~Di~~~s~ 230 (447)
+.+.. .++.+|++.+ ...++. .+ ++++.++|++||+++|+|+++ .|+--.+. +. .-++ ..|+++++
T Consensus 213 ~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG~GRtG~~fa~~~~gv~PDivt~g- 290 (453)
T PRK06943 213 RLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIA-VGCGRTGTFFACEQAGVWPDFLCLS- 290 (453)
T ss_pred HHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCCCcchhHHHhCCCCCCeEeee-
Confidence 77753 2456777764 122331 12 589999999999999999997 44322221 10 0011 36999986
Q ss_pred CcccCCC--CCceEEeecCCcchhhHHHHhhhc-----cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHH
Q 013217 231 HKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 303 (447)
Q Consensus 231 ~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~-----~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~ 303 (447)
|.++|. +.|.+++++ ++.+.+... ...+.+-+.|...+++..+.++.+.+++ ..++..+..++
T Consensus 291 -Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~---l~~~~~~~G~~ 360 (453)
T PRK06943 291 -KGISGGYLPLSLVLSRD------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDD---VLARNARKSAR 360 (453)
T ss_pred -hhhccCcccceEEEEcH------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence 998643 457777877 676665421 1111111224555555556677766544 35566666777
Q ss_pred HHHHHHHC-CcEeeeC--CCCCeeEEecCCC-CCCC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCcccc
Q 013217 304 LASRLVEL-GYKLVSG--GSDNHLVLVDLRP-MGID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 376 (447)
Q Consensus 304 l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~-~~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~ 376 (447)
|.+.|++. ....+.. +.. .+.-+.+.. .... ...+.+.+.++||.+... ...+|+.++...|
T Consensus 361 l~~~L~~l~~~~~v~~vrG~G-l~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~----------g~~l~~~Ppl~it 429 (453)
T PRK06943 361 LRAALAPLAAHPQVRHLRQRG-TIFAFDVALDGDAARTFSRRFFEAALERELLLRPI----------GTTVYLMPPYVLD 429 (453)
T ss_pred HHHHHHHHhcCCCEEeEeccc-cEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec----------CCEEEEeCCCcCC
Confidence 77777652 1111111 111 122334431 1111 245667778899998431 1369999887777
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 013217 377 RGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 377 ~g~~~~di~~l~~~i~~~l~~~ 398 (447)
++|++++++++.+++...
T Consensus 430 ----~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 430 ----DDEIAWLAERTRATLDAT 447 (453)
T ss_pred ----HHHHHHHHHHHHHHHHHH
Confidence 999999999999999753
No 346
>PRK07678 aminotransferase; Validated
Probab=99.37 E-value=1.7e-09 Score=108.70 Aligned_cols=217 Identities=17% Similarity=0.119 Sum_probs=124.4
Q ss_pred HHHHHhhh---hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhh-ccccccccCC-CCCC-cccEEE
Q 013217 160 MLEKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVT 227 (447)
Q Consensus 160 ~l~~~~~~---~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~-~g~~~~~~~~-~~~~-~~Di~~ 227 (447)
.++++++. .++.+||+.+- ...+ ..+ +++++++|++||+++|+|+++. .|-... ... .-++ ..|+++
T Consensus 201 ~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~~~~~~gv~PDivt 279 (451)
T PRK07678 201 EIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK-AFGFMNYGVKPDIIT 279 (451)
T ss_pred HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch-hHHHHhcCCCCCEEE
Confidence 35555641 24567777632 1223 222 6899999999999999999972 332221 100 0011 369998
Q ss_pred eCCCcccCCC--CCceEEeecCCcchhhHHHHhhhcc------CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 013217 228 TTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNAV------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 299 (447)
Q Consensus 228 ~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~~------~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~ 299 (447)
++ |.|+|. +.|.+++++ ++.+.+.... ..++++ .+...+++..++++.+.+++ +.+++.+
T Consensus 280 ~g--K~lggG~~Pi~av~~~~------~i~~~~~~~~~~~~~~h~~T~~-gnp~~~aaa~a~l~~l~~~~---~~~~~~~ 347 (451)
T PRK07678 280 MA--KGITSAYLPLSATAVKK------EIYEAFKGKGEYEHFRHVNTFG-GNPAACALALKNLEIMENEN---LIERSAQ 347 (451)
T ss_pred ee--cccccCCcceeEEEEcH------HHHHHHhccCcccccccCCCCC-cCHHHHHHHHHHHHHHHhCC---HHHHHHH
Confidence 75 998653 457777877 6766664311 112222 24455555555777766544 3566666
Q ss_pred HHHHHHHHHHHC--CcEeee--CCCCCeeEEecCCCCC-----CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeE
Q 013217 300 NCRALASRLVEL--GYKLVS--GGSDNHLVLVDLRPMG-----ID---GARVEKILDMASITLNKNSVPGDKSALVPGGI 367 (447)
Q Consensus 300 ~~~~l~~~L~~~--g~~~~~--~~~~~~~~~v~~~~~~-----~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 367 (447)
..++|.+.|++. ...++. .+. ..+.-+.+.... .+ ...+...|.++||.+... -| ..+.....|
T Consensus 348 ~g~~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~-g~--~v~~~~~~l 423 (451)
T PRK07678 348 LGELLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKN-GD--TVAGYNNVL 423 (451)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeec-Cc--cccCCCCEE
Confidence 777777777541 111111 111 112223332100 01 245667788899998532 01 001113579
Q ss_pred EEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 368 RIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 368 Rig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
|++++..+| ++|++++++++.+++..
T Consensus 424 rl~Ppl~it----~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 424 TLSPPLVIS----SEEIAFIVGTLKTALER 449 (451)
T ss_pred EEECCCcCC----HHHHHHHHHHHHHHHHh
Confidence 999988777 99999999999998864
No 347
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.37 E-value=5.1e-10 Score=105.94 Aligned_cols=278 Identities=18% Similarity=0.136 Sum_probs=168.5
Q ss_pred HHHHHHHcCCCCCccceeeecCCc-HHHHHHHHHHh-c--CCCCEEEEecCCCCcccCCCccccccccccccceeEEEec
Q 013217 72 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 147 (447)
Q Consensus 72 ~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~al-~--~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 147 (447)
+..+++++|++- +|-....+ |.+-.+++++. . ++..++++..-.|+.++... .....+.+++++.+
T Consensus 126 Qtlv~dLTGm~V----ANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl------~Tra~~~g~~i~~~ 195 (450)
T COG0403 126 QTLVADLTGLDV----ANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVL------RTRAEGLGIEIEVV 195 (450)
T ss_pred HHHHHHHhCCCc----ccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHH------HhhcccCceEEEEe
Confidence 467889999984 23322333 45556565555 2 33689999888887765422 11233444565554
Q ss_pred ccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-ccc
Q 013217 148 RLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 224 (447)
Q Consensus 148 ~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~D 224 (447)
+.+ |.+++++. ++..+..|++..|++.+ ..|+.+|.+.+|++|+++++=. ..+..++...|-. ++|
T Consensus 196 ~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~a----DplaL~LL~pPGe~GAD 264 (450)
T COG0403 196 DAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAA----DPLALGLLKPPGEFGAD 264 (450)
T ss_pred ccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEe----chhHhhccCCccccCCc
Confidence 332 77888877 44367888998887665 4579999999999999887532 2223333444544 799
Q ss_pred EEEeCCCc-----ccCCCCCceEEeecCCcchhhHHHH----------------------------hhhccCCCCCCCCc
Q 013217 225 VVTTTTHK-----SLRGPRGGMIFFKKDPVLGVELESA----------------------------INNAVFPGLQGGPH 271 (447)
Q Consensus 225 i~~~s~~K-----~l~Gp~gG~i~~~~~~~~~~~~~~~----------------------------i~~~~~~~~~g~p~ 271 (447)
|++++++- +|+||..|++.++++ +..+ |++.......+ .
T Consensus 265 IvvG~~QrfGvPmgfGGPhag~fA~~~~------~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNIC--T 336 (450)
T COG0403 265 IVVGSAQRFGVPMGFGGPHAGYFAVKDE------FKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNIC--T 336 (450)
T ss_pred eEEecCcccCCCcCCCCcceeeeeEhHh------HhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhh--H
Confidence 99999986 357888899999984 3222 11111000011 1
Q ss_pred HHHHHHHHHHH--HHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcC
Q 013217 272 NHTIGGLAVCL--KHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAS 347 (447)
Q Consensus 272 ~~~~aal~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~g 347 (447)
...+.|+++++ -.+...|.++..+++.+.+.+++++|++ .|++++.. .++-.+.++-.......+.......|
T Consensus 337 nQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~~~~~~l~~~~~~~G 413 (450)
T COG0403 337 NQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPEEVAEALLAAAIAGG 413 (450)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecchhHHHHHHHHHHhcC
Confidence 12233333322 2334567899999999999999999996 45877643 23222223211111223334444567
Q ss_pred eEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 348 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 348 I~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
|.++.. ....+=++....++ ++|++.+++++...
T Consensus 414 ~~L~~~---------~~~~~~ia~tEt~t----~~~i~~l~~~~~~~ 447 (450)
T COG0403 414 INLRRV---------DADTVLIALTETTT----KEDIDALVAAFGGV 447 (450)
T ss_pred Cceeee---------cCCceEEEeecccC----HHHHHHHHHHHhhh
Confidence 766531 12356667677777 99999999887653
No 348
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.37 E-value=3.1e-09 Score=106.98 Aligned_cols=314 Identities=16% Similarity=0.097 Sum_probs=165.1
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|.|.+++.+.+.+....+. .+ ..+....+++.+.+.. .+ . ...++||++|+..++... ....
T Consensus 117 ~p~v~~av~~ql~~~~~~~~-------~~----~~~~~lAe~l~~~~p~-~~-~--v~f~~SGsEA~e~AlklAR~~tgr 181 (474)
T PLN02482 117 DDEVLAALAETMKKGTSFGA-------PC----LLENVLAEMVIDAVPS-VE-M--VRFVNSGTEACMGVLRLARAYTGR 181 (474)
T ss_pred CHHHHHHHHHHHhhCCCCCC-------CC----HHHHHHHHHHHHhCCC-CC-E--EEEeCChHHHHHHHHHHHHHhcCC
Confidence 68899998887765221111 11 1222223566666532 12 1 233589999999887643 2234
Q ss_pred CEEEEecCCCCcccC-CCccccc--ccc--c-cccce----eEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEcCC
Q 013217 111 DRIMGLDLPHGGHLS-HGFMTPK--RRV--S-GTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGAS 178 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~-~~~~~~~--~~~--~-~~g~~----~~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~~~ 178 (447)
++|+...-.|.|+.. .+..... ... . ..+.. ...+.++ .-|++++++.+..+ ++.+||+.+.
T Consensus 182 ~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~~~iAavI~Epv 255 (474)
T PLN02482 182 EKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YNDLEAVKKLFEANKGEIAAVILEPV 255 (474)
T ss_pred CEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CCChHHHHHHHHhCCCceEEEEECCC
Confidence 678877655444310 0000000 000 0 00000 0011111 12789999888642 3456666522
Q ss_pred -CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCC-CCCceEEeecCC
Q 013217 179 -AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDP 248 (447)
Q Consensus 179 -~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~G-p~gG~i~~~~~~ 248 (447)
.+.+ ..+ ++++.++|++||+++|+|++| .|+ ..+.. . .-++ ..|++++ .|.++| .+.|.+.+++
T Consensus 256 ~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf-R~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~-- 329 (474)
T PLN02482 256 VGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF-RIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRR-- 329 (474)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe-ecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcH--
Confidence 2223 222 578999999999999999998 565 22210 0 0011 2588766 599864 3346667777
Q ss_pred cchhhHHHHhhhccCCCCCCC--CcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CCcEeeeCCCCC
Q 013217 249 VLGVELESAINNAVFPGLQGG--PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDN 322 (447)
Q Consensus 249 ~~~~~~~~~i~~~~~~~~~g~--p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~ 322 (447)
++.+.+.........+| .+...+++..++++.+.+++ ..+++.+..++|.+.|.+ .|+.+....-..
T Consensus 330 ----ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g 402 (474)
T PLN02482 330 ----EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPG---TYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG 402 (474)
T ss_pred ----HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce
Confidence 67776643110011122 34445555555777775543 466777777888887766 334443211112
Q ss_pred eeEEecCCCC---------CCC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHH
Q 013217 323 HLVLVDLRPM---------GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 390 (447)
Q Consensus 323 ~~~~v~~~~~---------~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~ 390 (447)
++-+.+... .-+ ...+.+.|.++||.+.....+ . +. ++..+| ++|++++.++
T Consensus 403 -~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~--------~--~~-psl~ht----~~dId~~l~a 466 (474)
T PLN02482 403 -MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFE--------A--GF-TSLAHT----EEDIDFTIAA 466 (474)
T ss_pred -EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCC--------C--Cc-CCCCCC----HHHHHHHHHH
Confidence 221211110 001 134666777899998542111 0 11 333444 9999999999
Q ss_pred HHHHHH
Q 013217 391 IHEGVE 396 (447)
Q Consensus 391 i~~~l~ 396 (447)
+++++.
T Consensus 467 l~~~l~ 472 (474)
T PLN02482 467 AERVLA 472 (474)
T ss_pred HHHHHH
Confidence 998875
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.35 E-value=3.6e-09 Score=106.54 Aligned_cols=321 Identities=17% Similarity=0.130 Sum_probs=171.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-.|.|.+++.+.+.. +. +...++. ++...+ ..++++++++...+. ...++||++|+.+++.-. ...
T Consensus 88 ~~p~v~~Ai~~ql~~-~~--~~~~~~~--~~~~~~----lae~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~tg 155 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-LP--FSPRRFT--NETAIE----CAEKLTEIAGGELNR---VLFAPGGTSAIGMALKLARHITG 155 (459)
T ss_pred CCHHHHHHHHHHHHh-CC--CccCccC--CHHHHH----HHHHHHHhCCCCCCE---EEECCCcHHHHHHHHHHHHHhcC
Confidence 368899888877754 22 1111211 222222 235677777532221 244689999999877643 223
Q ss_pred CCEEEEecCCCCcccCCCccccccccccccc------------eeEEEecccCCC-CC-CC------CHHHHHHHhhhh-
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-LV------DYDMLEKTAILF- 168 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~-~~-~i------d~~~l~~~~~~~- 168 (447)
..+|+...-.|.|.-. + .+.+.+. .+..++.+.... .+ .. ++++++++++..
T Consensus 156 r~~ii~~~~~yHG~t~-~------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 156 NFKVVSLWDSFHGASL-D------AISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred CCEEEEEeCCCcCccH-H------HHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 4678877655433210 0 0111110 011122111000 00 01 135577777532
Q ss_pred CCcEEEEcCCCC-CC-CCC---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCCC--C
Q 013217 169 RPKLIIAGASAY-PR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--R 238 (447)
Q Consensus 169 ~~klii~~~~~~-~~-~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~Gp--~ 238 (447)
++.+||+.+... +. ..+ +++++++|++||+++|+|++|. |+--.|.. . .-++ ..|++++ .|.++|. +
T Consensus 229 ~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~~--gKgl~gG~~P 305 (459)
T PRK06082 229 GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILCI--GKGLGGGLVP 305 (459)
T ss_pred CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEEe--cccccCCCCc
Confidence 455666653211 12 234 7999999999999999999984 54222211 1 0011 3688885 5999653 4
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEee
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 316 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 316 (447)
.|.+++++ ++..........++.+ .+...+++..+.++.+.+++ ..++..+..++|.+.|++. ...++
T Consensus 306 ~~av~~~~------~i~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i 375 (459)
T PRK06082 306 IAAMITKD------KYNTAAQISLGHYTHE-KSPLGCAAALATIEVIEQEG---LLEKVKADSQFMRERLLEMKAKYPLI 375 (459)
T ss_pred ceEEEEcH------HHHhhccCCCCCCCCC-cCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 56777776 5544332211112222 34444555555677665443 4667777777888777652 12222
Q ss_pred eC--CCCCeeEEecCCCC----CCC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHH
Q 013217 317 SG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 387 (447)
Q Consensus 317 ~~--~~~~~~~~v~~~~~----~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l 387 (447)
.. +.. .+.-+.+... .-+ ...+...+.++||.+... ....+|+.++...+ ++|++++
T Consensus 376 ~~vrG~G-l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---------~~~~i~~~Ppl~it----~~eid~~ 441 (459)
T PRK06082 376 GDVRGIG-LLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS---------QGNVIQLSPPLIIT----REELTQA 441 (459)
T ss_pred eeeeecc-ceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec---------CCCEEEEeCCCccC----HHHHHHH
Confidence 21 111 1222333211 001 234556677899988431 13479999887666 9999999
Q ss_pred HHHHHHHHHHH
Q 013217 388 ADFIHEGVEIT 398 (447)
Q Consensus 388 ~~~i~~~l~~~ 398 (447)
.+++.+++...
T Consensus 442 ~~~l~~~l~~~ 452 (459)
T PRK06082 442 LAILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998754
No 350
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.34 E-value=2.9e-09 Score=106.98 Aligned_cols=204 Identities=14% Similarity=0.095 Sum_probs=119.4
Q ss_pred CCcEEEEcC-CCCCCC--C---ChHHHHHHHHHhCCEEEEehhhhccccccccC-CC-CCC-cccEEEeCCCcccC-CCC
Q 013217 169 RPKLIIAGA-SAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSLR-GPR 238 (447)
Q Consensus 169 ~~klii~~~-~~~~~~--~---~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~-~~~-~~Di~~~s~~K~l~-Gp~ 238 (447)
++..|++.+ .++++. . -+++++++|++||+++|+|+++ .|+...+.. .. -++ ..|++++ .|.++ |.+
T Consensus 206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~P 282 (442)
T TIGR00709 206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ-AGFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLP 282 (442)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCchhHHHHcCCCCcEEEE--cccccCCcc
Confidence 456677763 233332 2 2689999999999999999997 454333321 10 011 2588885 59985 555
Q ss_pred CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEee
Q 013217 239 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 316 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 316 (447)
.|++++++ ++ +.+......++. +.+...+++..++++.+.++++ .++..+..++|.+.|++. ...++
T Consensus 283 igav~~~~------~~-~~~~~~~~~~T~-~gnpla~aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~v 351 (442)
T TIGR00709 283 LAVLLIAP------EF-DAWQPAGHTGTF-RGNQLAMVTGTEALNYWKDDNL---AQNAQERGERITSFLDDMIKEHPCI 351 (442)
T ss_pred cEEEEEch------HH-hccCCCcCCCCC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 68888876 53 333222222222 3355555555567776655444 556666677777777651 22222
Q ss_pred eC--CCCCeeEEecCCCCC--------C-----CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCH
Q 013217 317 SG--GSDNHLVLVDLRPMG--------I-----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 381 (447)
Q Consensus 317 ~~--~~~~~~~~v~~~~~~--------~-----~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~ 381 (447)
.. +. .-+.-+.+.... . ....+...|.++||.+... + .....||+.++...| +
T Consensus 352 ~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---~----~~~~~l~~~Ppl~it----~ 419 (442)
T TIGR00709 352 GNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETG---G----REGEVFRLLCPITID----Q 419 (442)
T ss_pred eeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeec---C----CCCCEEEEECCCCCC----H
Confidence 21 11 112223332110 0 1234666777899998531 0 113579998887777 9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013217 382 KEFVAIADFIHEGVEIT 398 (447)
Q Consensus 382 ~di~~l~~~i~~~l~~~ 398 (447)
+|++++.+++.+++...
T Consensus 420 ~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 420 EECEEGISRFKQAVEEA 436 (442)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998753
No 351
>PRK05965 hypothetical protein; Provisional
Probab=99.34 E-value=3.9e-09 Score=106.36 Aligned_cols=331 Identities=15% Similarity=0.069 Sum_probs=172.4
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc-----
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 107 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~----- 107 (447)
.|.|.+++.+.+.+- . +....+....+ ......+++.+++..+.+. ....+||++|+.+++....
T Consensus 64 ~p~i~~Ai~~q~~~~-~--~~~~~~~~~~~----~~~~lae~L~~~~p~~~~~---v~f~~sGSEAve~AlKlAr~~~~~ 133 (459)
T PRK05965 64 QESIVEAAAEQMREL-P--YATGYFHFGSE----PAIRLAAKLAERAPGSLNH---VYFTLGGSDAVDSAVRFIRHYWNA 133 (459)
T ss_pred CHHHHHHHHHHHHhc-C--CcccccccCCH----HHHHHHHHHHhhCCCCcCE---EEEeCChhHHHHHHHHHHHHHHHh
Confidence 688999988877642 1 11100000111 1112234666665322221 2335889999998876432
Q ss_pred -C-C-CCEEEEecCCCCcccC----C-CccccccccccccceeEEEecccCC-CCCCCC--------HHHHHHHhhh---
Q 013217 108 -K-P-HDRIMGLDLPHGGHLS----H-GFMTPKRRVSGTSIYFESMPYRLDE-STGLVD--------YDMLEKTAIL--- 167 (447)
Q Consensus 108 -~-p-gd~Vl~~~~~~~~~~~----~-~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id--------~~~l~~~~~~--- 167 (447)
. + ..+|+...-.|.|.-. . +...........-.....++++... ....-| ++++++.+..
T Consensus 134 ~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 213 (459)
T PRK05965 134 TGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGA 213 (459)
T ss_pred cCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC
Confidence 1 2 3578888766544310 0 0000000000000001122222100 001123 3567777753
Q ss_pred hCCcEEEEcCC-CCCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCCC-
Q 013217 168 FRPKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP- 237 (447)
Q Consensus 168 ~~~klii~~~~-~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~Gp- 237 (447)
.+..+||+.+- ...+ ..+ +++++++|++||+++|+|+++ .|+--.+.. . .-.+ ..|+++++ |.|+|.
T Consensus 214 ~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~ 290 (459)
T PRK05965 214 DNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVI-TGFGRTGPLFACEAEGVVPDLMTVA--KGLTSGY 290 (459)
T ss_pred CceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-ccCccCchhhhHhhcCCCCCeEEec--hhhccCC
Confidence 24567777632 1222 112 589999999999999999997 443222210 0 0011 26999987 998654
Q ss_pred -CCceEEeecCCcchhhHHHHhhhc------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 238 -RGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 238 -~gG~i~~~~~~~~~~~~~~~i~~~------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
+-|.+++++ ++.+.+... ...+.+-+.|...+++..+.++.+.+++ +.++..+..++|.+.|++
T Consensus 291 ~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~ 361 (459)
T PRK05965 291 VPMGAVLMSD------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGG---LLANGQKAGPRFAAGLDA 361 (459)
T ss_pred cceeEEEEcH------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHh
Confidence 457777777 676665421 1111111234455555555677765544 356666777777777766
Q ss_pred C-CcEeeeCCCC-CeeEEecCCCC-----C--C---CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCC
Q 013217 311 L-GYKLVSGGSD-NHLVLVDLRPM-----G--I---DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 378 (447)
Q Consensus 311 ~-g~~~~~~~~~-~~~~~v~~~~~-----~--~---~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g 378 (447)
. ...++..-.. ..+.-+.+... . . -...+.+.+.++||.+... ....||+.++...+
T Consensus 362 l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~---------g~~~i~~~PpL~it-- 430 (459)
T PRK05965 362 LRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF---------GDGVLGFAPALCCT-- 430 (459)
T ss_pred hccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec---------CCcEEEEECCCcCC--
Confidence 2 1222221011 11222333210 0 0 1234666778899998531 12469998887777
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 013217 379 FSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 379 ~~~~di~~l~~~i~~~l~~~ 398 (447)
++|++++.+.+.+++...
T Consensus 431 --~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 431 --EGEFDLIFERTRKTLDDV 448 (459)
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 999999999999999753
No 352
>PRK07480 putative aminotransferase; Validated
Probab=99.33 E-value=4.8e-09 Score=105.49 Aligned_cols=212 Identities=16% Similarity=0.139 Sum_probs=120.8
Q ss_pred HHHHHHhhh---hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhcccccccc-CCC-CCC-cccEE
Q 013217 159 DMLEKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCDVV 226 (447)
Q Consensus 159 ~~l~~~~~~---~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~-~~~-~~Di~ 226 (447)
+++++.+.. .++.+||+.+. ...+ ..+ +++++++|++||+++|+|+++ .|+--.+. ... -.+ ..|++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv 284 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVI-CGFGRTGEWFGSQHFGIKPDLM 284 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhhhhhcCCCCCee
Confidence 566555532 24557777632 2223 222 789999999999999999998 34322221 000 011 25888
Q ss_pred EeCCCcccCCC--CCceEEeecCCcchhhHHHHhh--hc-c-CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHH-HH
Q 013217 227 TTTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN--NA-V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV-VS 299 (447)
Q Consensus 227 ~~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~--~~-~-~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~-~~ 299 (447)
+++ |.++|. +.|.+++++ ++.+.+. .. . ..++++ .++..+++..++|+.+.++++ .++. .+
T Consensus 285 ~~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~l---~~~~~~~ 352 (456)
T PRK07480 285 TIA--KGLTSGYIPMGAVGVGD------RVAEVLIEEGGEFNHGFTYS-GHPVAAAVALANLRILRDEGI---VERVRDD 352 (456)
T ss_pred eee--hhhccCCccceEEEEcH------HHHHHHhcCCCCcccCCCCC-cCHHHHHHHHHHHHHHHhCCH---HHHHHHH
Confidence 775 998653 356666666 6766652 11 1 122222 345556666667777765443 4455 35
Q ss_pred HHHHHHHHHHHC-CcEeeeC--CCCCeeEEecCCCC-C----C-C----HHHHHHHHhhcCeEEccCCCCCCCCCCCCCe
Q 013217 300 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-G----I-D----GARVEKILDMASITLNKNSVPGDKSALVPGG 366 (447)
Q Consensus 300 ~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~-~----~-~----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 366 (447)
..++|.+.|++. ...++.. +.. .+.-+.+... . . + ...+...|.++||.+... ...
T Consensus 353 ~g~~l~~~l~~l~~~~~i~~vrG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~ 421 (456)
T PRK07480 353 TGPYLQKRLRELADHPLVGEVRGVG-LVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV----------GDR 421 (456)
T ss_pred HHHHHHHHHHHhhcCCCeeeEEeec-ceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec----------CCE
Confidence 566666666551 1111111 111 1222233111 0 0 1 234666777899998421 247
Q ss_pred EEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 367 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 367 iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+|+.++...+ ++|++++.+++.+++...
T Consensus 422 l~~~Ppl~it----~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 422 MIISPPLVIT----HAEIDELVEKARKALDAT 449 (456)
T ss_pred EEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 9998776666 999999999999999754
No 353
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.2e-10 Score=108.39 Aligned_cols=335 Identities=17% Similarity=0.173 Sum_probs=191.7
Q ss_pred cCeeEecCCCCC----CHHHHHHHhhhhhccCCCCCCCCc-ccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc
Q 013217 21 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~n~~----~~~v~~a~~~~~~~~~~~g~~~~~-~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG 95 (447)
+.+|+ +|.||. .+.+.+.....+. +|+-|..|=| +||-....-.+| +++++++|++.. +..+-|
T Consensus 95 ~~~N~-aS~NfL~l~~~~~ike~a~~~lr-kyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~g 163 (467)
T KOG1358|consen 95 DVLNF-ASANFLGLIENEEIKEEASFTLR-KYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYG 163 (467)
T ss_pred eeecc-cchhhhhhcccHHHHHHHHHHHH-HhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeeccc
Confidence 44554 788876 5777777666554 5766666544 455444444566 689999999862 445777
Q ss_pred HHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh------C
Q 013217 96 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------R 169 (447)
Q Consensus 96 s~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~------~ 169 (447)
.+++..++.++.+.||.|.+..-.+.+. .+.+.++.- .+..+. ..|.++++.+..+. +
T Consensus 164 F~ti~S~ipafsKrGDIi~~de~~nfaI--------q~GlqlSRS--~i~~Fk------hndm~~lerll~E~~~~~~K~ 227 (467)
T KOG1358|consen 164 FSTIESAIPAFSKRGDIIFVDEAVNFAI--------QKGLQLSRS--TISYFK------HNDMEDLERLLPEQEDEDQKN 227 (467)
T ss_pred cchhhhcchhhhccCcEEEEehhhhHHH--------HHHHhhhhh--eeEEec------CCCHHHHHHhccCcchhhhhc
Confidence 7888889999999999998876332211 112222211 122222 35777777665331 1
Q ss_pred C-----c-EEEEc--CCCCCCCCChHHHHHHHHHhCCEEEEehhhhcccccc---cc--C-CCCCCcccEEEeCCCcccC
Q 013217 170 P-----K-LIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--V-ADPFKYCDVVTTTTHKSLR 235 (447)
Q Consensus 170 ~-----k-lii~~--~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~---~~--~-~~~~~~~Di~~~s~~K~l~ 235 (447)
| + .|++. ..|++...|+.+|.++..+|...++.|++.++|.... |+ + ..+....|++++|..-.++
T Consensus 228 ~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala 307 (467)
T KOG1358|consen 228 PKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA 307 (467)
T ss_pred cccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc
Confidence 2 2 33443 4566668999999999999999999999998887654 22 1 1233468999999877764
Q ss_pred CCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcE
Q 013217 236 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 236 Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
..||+..++.-. -..+++....+-...+.|....-+|. .++..+.+ -.+..+.+++....+-+.|+. .++.
T Consensus 308 -s~GgFc~G~~~i----~~hQrLSg~~Y~fSAslPp~la~aa~-~ai~i~~~--~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 308 -SGGGFCAGKSFI----ADHQRLSGSGYCFSASLPPYLAGAAI-KAILIEEW--NPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred -ccCceeecceee----EeeeeccccceeeeccCchhhhhhHH-HHHHHHhh--CcchhhhhhccccccchhhhcCCceE
Confidence 346777664410 01122322111101122333222222 23333221 123455666666666677766 3566
Q ss_pred eeeCCCCCeeEEecCCCCCCCHH-------HHHHHHhhcCeEEccC-CCCCCC-CCCCCCeEEEecCccccCCCCHHHHH
Q 013217 315 LVSGGSDNHLVLVDLRPMGIDGA-------RVEKILDMASITLNKN-SVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFV 385 (447)
Q Consensus 315 ~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~L~~~gI~v~~~-~~p~~~-~~~~~~~iRig~~~~~~~g~~~~di~ 385 (447)
+.+. ..+.+..+.+.....+.+ ++.+.+...|+.+... .+-... .+ .+..|||++. .+|+++|++
T Consensus 380 v~~~-~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~-~~pSiri~~~----a~~seeel~ 453 (467)
T KOG1358|consen 380 VSGS-PESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCP-IPPSIRICVS----AGMSEEELE 453 (467)
T ss_pred EecC-cCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCC-CCCcEEEEEe----CCCCHHHHH
Confidence 5543 445555554443222222 2333222237766432 221111 22 2447999765 466699999
Q ss_pred HHHHHHHHHHH
Q 013217 386 AIADFIHEGVE 396 (447)
Q Consensus 386 ~l~~~i~~~l~ 396 (447)
++++.|+++..
T Consensus 454 ra~~~ik~~~~ 464 (467)
T KOG1358|consen 454 RAAELIKEVAS 464 (467)
T ss_pred HHHHHHHHHHH
Confidence 99999988765
No 354
>PRK07482 hypothetical protein; Provisional
Probab=99.33 E-value=4.4e-09 Score=106.04 Aligned_cols=217 Identities=15% Similarity=0.133 Sum_probs=126.3
Q ss_pred CHHHHHHHhhh---hCCcEEEEcCC-CCCCC--CC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CCC-CCC-ccc
Q 013217 157 DYDMLEKTAIL---FRPKLIIAGAS-AYPRD--FD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCD 224 (447)
Q Consensus 157 d~~~l~~~~~~---~~~klii~~~~-~~~~~--~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~-~~~-~~D 224 (447)
+++++++++.. .++.+||+.+. ...+. .+ +++|+++|++||+++|+|+++ .|+--.+. ... -++ ..|
T Consensus 205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~-tGfGRtG~~~a~~~~gv~PD 283 (461)
T PRK07482 205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVV-TGFGRLGSMFGSDHYGIEPD 283 (461)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccc-cCCCcCcchhhHHhcCCCCC
Confidence 46778887742 24567777632 22222 12 589999999999999999997 44321221 000 011 369
Q ss_pred EEEeCCCcccCCC--CCceEEeecCCcchhhHHHHhhhc------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHH
Q 013217 225 VVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 296 (447)
Q Consensus 225 i~~~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~ 296 (447)
+++++ |.|+|. +.|.+++++ ++.+.+... ...+.+-+.|...+++..+.++.+.++++ .++
T Consensus 284 iv~~g--Kgl~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l---~~~ 352 (461)
T PRK07482 284 LITVA--KGLTSAYAPLSGSIVGE------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENL---VGN 352 (461)
T ss_pred EEEEc--cccccCccccceeeecH------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCH---HHH
Confidence 99976 999653 446666666 566655421 11111112355556666667777665543 555
Q ss_pred HHHHHHHHHHHHHHC--CcEeeeC--CCCCeeEEecCCCCC-----CC-----HHHHHHHHhhcCeEEccCCCCCCCCCC
Q 013217 297 VVSNCRALASRLVEL--GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSAL 362 (447)
Q Consensus 297 ~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~ 362 (447)
..+..++|.+.|++. ...++.. +. ..+.-+.+.... .+ ...+...|.++||.+.. .|
T Consensus 353 ~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~--~~------ 423 (461)
T PRK07482 353 AAEVGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARA--MP------ 423 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEec--CC------
Confidence 666677777777541 1222211 11 112223332110 01 24566777889998842 11
Q ss_pred CCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 363 VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 363 ~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
....+|+.++...+ ++|++++.+++.+++...
T Consensus 424 ~~~~i~~~Ppl~it----~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 424 HGDILGFAPPLVLT----RAEADEIVAIAKDAVDEV 455 (461)
T ss_pred CCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 12479998777776 999999999999998753
No 355
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.32 E-value=3.5e-09 Score=106.00 Aligned_cols=306 Identities=14% Similarity=0.087 Sum_probs=164.7
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|.|.+++.+.+......++ ..+ .+....+++.+.+.. .+. ....+||++|+.+++... ....
T Consensus 71 ~p~v~~ai~~q~~~~~~~~~-------~~~----~~~~la~~l~~~~p~-~~~---v~f~~sGseA~e~AlklAr~~tgr 135 (428)
T PRK12389 71 HPHITKAITEAAENGVLYGT-------PTE----LEIEFAKMLKEAIPS-LEK---VRFVNSGTEAVMTTIRVARAYTGR 135 (428)
T ss_pred CHHHHHHHHHHHHhCCccCC-------CCH----HHHHHHHHHHHhCCC-CcE---EEEeCCHHHHHHHHHHHHHHhhCC
Confidence 68888888877764211111 111 111223456565531 121 233689999999887743 2234
Q ss_pred CEEEEecCCCCcccCCCccccccccccccce-----------e------EEEecccCCCCCCCCHHHHHHHhhhh--CCc
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------F------ESMPYRLDESTGLVDYDMLEKTAILF--RPK 171 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-----------~------~~~~~~~~~~~~~id~~~l~~~~~~~--~~k 171 (447)
.+|+...-.|.|.... .+...+.. + .+..++ ..|++.+++.+..+ ++.
T Consensus 136 ~~ii~~~~~yHG~t~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~va 202 (428)
T PRK12389 136 TKIIKFAGCYHGHSDL-------VLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKEALDKWGDEVA 202 (428)
T ss_pred CEEEEECCCcCCChHH-------HHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHHHHHhcCCcEE
Confidence 6788777554443100 00111100 0 011111 23789998888642 345
Q ss_pred EEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC--CCCCC-cccEEEeCCCcccCC-CCCce
Q 013217 172 LIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG-PRGGM 241 (447)
Q Consensus 172 lii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~--~~~~~-~~Di~~~s~~K~l~G-p~gG~ 241 (447)
+|++.+. ...+ ..+ +++|.++|+++|+++|+|++| .|+ -.+.. ..-++ ..|++++ .|.++| .+.|.
T Consensus 203 avi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~-tG~-Rt~~~~a~~~~gv~PDivt~--gK~lggG~Pi~a 278 (428)
T PRK12389 203 AVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVI-TAF-RFMYGGAQDLLGVEPDLTAL--GKIIGGGLPIGA 278 (428)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc-ccc-ccCcchhhHHhCCCCCeeee--chhhcCCCceeE
Confidence 6666522 2223 344 799999999999999999998 443 11110 00011 2588765 499854 33466
Q ss_pred EEeecCCcchhhHHHHhhhc--cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CCcEe
Q 013217 242 IFFKKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKL 315 (447)
Q Consensus 242 i~~~~~~~~~~~~~~~i~~~--~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~ 315 (447)
+++++ ++.+.+... .+.+.+-+.++..+++..+.++.+.+++ ..++..+..++|.+.|++ .++..
T Consensus 279 v~~~~------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~ 349 (428)
T PRK12389 279 YGGRK------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEG---VYEKLDRLGAMLEEGILEAAEKHGITI 349 (428)
T ss_pred EeEHH------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 67777 677766421 1111111234555555556777776543 466677777888877765 34321
Q ss_pred -eeCCCCCeeEEecCCCCCC---------C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHH
Q 013217 316 -VSGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 382 (447)
Q Consensus 316 -~~~~~~~~~~~v~~~~~~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~ 382 (447)
+..+. . ++-+.+..... + ...+.+.|.++||.+... . ...+. ++..++ ++
T Consensus 350 ~v~r~~-g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----~-----~~~~~--~~l~~t----~e 412 (428)
T PRK12389 350 TINRLK-G-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPS----K-----YEAWF--LTTAHT----EE 412 (428)
T ss_pred EEEecC-c-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecC----C-----CCCee--ecCCCC----HH
Confidence 11111 1 22222211100 1 235667778899998542 1 11232 233444 99
Q ss_pred HHHHHHHHHHHHHH
Q 013217 383 EFVAIADFIHEGVE 396 (447)
Q Consensus 383 di~~l~~~i~~~l~ 396 (447)
|++++.+++++++.
T Consensus 413 ~id~~~~~l~~~l~ 426 (428)
T PRK12389 413 DIEETLEAVDRAFA 426 (428)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998885
No 356
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=1.1e-08 Score=102.81 Aligned_cols=330 Identities=15% Similarity=0.111 Sum_probs=171.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~p 109 (447)
-.|.|.+++.+.+.+-. +....+.. .+ ... ...+++.+++....+ . ....+||++|+.+++... ...
T Consensus 70 ~~p~i~~Ai~~ql~~~~---~~~~~~~~-~~---~~~-~lae~L~~~~p~~~~-~--v~f~~SGsEA~e~AlklAr~~tg 138 (457)
T PRK05639 70 SHPKLVKAVQEQVALIQ---HSMIGYTH-SE---RAI-RVAEKLAEISPIENP-K--VLFGLSGSDAVDMAIKVSKFSTR 138 (457)
T ss_pred CCHHHHHHHHHHHHhcc---ccccCccC-CH---HHH-HHHHHHHhhCCCCcC-E--EEEeCchHHHHHHHHHHHHHhcC
Confidence 36889988888776421 11111111 11 111 123466666653322 1 233589999999887644 233
Q ss_pred CCEEEEecCCCCcccCC-----Cc-cccccccccccceeEEEecccCCC---C--CCCCHH--------HHHHHhh----
Q 013217 110 HDRIMGLDLPHGGHLSH-----GF-MTPKRRVSGTSIYFESMPYRLDES---T--GLVDYD--------MLEKTAI---- 166 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~-----~~-~~~~~~~~~~g~~~~~~~~~~~~~---~--~~id~~--------~l~~~~~---- 166 (447)
..+|+...-.|.|.-.. +. ........-.-..+..++++.... . ..-|.+ .+++.+.
T Consensus 139 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 218 (457)
T PRK05639 139 RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVV 218 (457)
T ss_pred CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 45788776554332100 00 000000000000122233321100 0 001222 3444432
Q ss_pred -hhCCcEEEEcCC-CCCCC-C-C---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeCCCcccCC
Q 013217 167 -LFRPKLIIAGAS-AYPRD-F-D---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG 236 (447)
Q Consensus 167 -~~~~klii~~~~-~~~~~-~-~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s~~K~l~G 236 (447)
..++.+||+.+- ..++. . + ++++.++|++||+++|+|++|. |+-..+.. . .-++ ..|++++ .|.++|
T Consensus 219 ~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~~--gK~l~g 295 (457)
T PRK05639 219 PPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLIIF--GKGVAS 295 (457)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEEe--chhhcC
Confidence 225667777632 12221 1 1 6899999999999999999985 64222211 1 0011 3699985 599964
Q ss_pred CC-CceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCc
Q 013217 237 PR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGY 313 (447)
Q Consensus 237 p~-gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~ 313 (447)
.- .|.+++++ ++.+..... ..++.+ .++..+++..++++.+.+++ ..++..+..++|.+.|++ .++
T Consensus 296 G~pi~av~~~~------~i~~~~~~~-~~~T~~-g~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~ 364 (457)
T PRK05639 296 GMGLSGVIGRK------ELMDLTSGS-ALLTPA-ANPVISAAAEATLEIIEEEN---LLKNALKVGEFIKKRLLEMKESF 364 (457)
T ss_pred CCcceeEEehH------HHHhhcCCC-cccCCC-cCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 38888887 565522211 112222 24444555555677665443 456666777788887766 233
Q ss_pred EeeeC--CCCCeeEEecCCC-CCC-C---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 314 KLVSG--GSDNHLVLVDLRP-MGI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 314 ~~~~~--~~~~~~~~v~~~~-~~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
.++.. +.. -+.-+.+.. ... + ...+.+.|.++|+.+... +.....||+.++...| ++|+++
T Consensus 365 ~~~~~VrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-------g~~~~~lr~~Ppl~it----~~~id~ 432 (457)
T PRK05639 365 EVIGDVRGKG-LMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY-------GMFGNVIRITPPLVIT----KEIAEK 432 (457)
T ss_pred CCEEeeccce-eEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec-------CCCCCEEEEeCCCccC----HHHHHH
Confidence 33321 111 112223321 110 1 235667778899998532 1113589999888777 999999
Q ss_pred HHHHHHHHHHHH
Q 013217 387 IADFIHEGVEIT 398 (447)
Q Consensus 387 l~~~i~~~l~~~ 398 (447)
+.+++++++...
T Consensus 433 ~~~~l~~~l~~~ 444 (457)
T PRK05639 433 GLEIMERAIKDA 444 (457)
T ss_pred HHHHHHHHHHHH
Confidence 999999999754
No 357
>PRK06149 hypothetical protein; Provisional
Probab=99.31 E-value=5.6e-09 Score=114.41 Aligned_cols=205 Identities=14% Similarity=0.072 Sum_probs=119.7
Q ss_pred CCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhh-hccccccccCCC-CCC-cccEEEeCCCcccCC-CC
Q 013217 169 RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVAD-PFK-YCDVVTTTTHKSLRG-PR 238 (447)
Q Consensus 169 ~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~-~~g~~~~~~~~~-~~~-~~Di~~~s~~K~l~G-p~ 238 (447)
++.+||+.+- ...+ ..+ ++++.++|++||+++|+|++| ..|-........ -++ ..|+++++ |.++| ..
T Consensus 744 ~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~g--K~lg~G~P 821 (972)
T PRK06149 744 GLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMA--KGMGNGHP 821 (972)
T ss_pred ceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEec--ccccCCee
Confidence 4556776521 2223 444 799999999999999999998 233322111000 011 36888664 99864 34
Q ss_pred CceEEeecCCcchhhHHHHhhh-ccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEe
Q 013217 239 GGMIFFKKDPVLGVELESAINN-AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKL 315 (447)
Q Consensus 239 gG~i~~~~~~~~~~~~~~~i~~-~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 315 (447)
.|++++++ ++.+.+.. ..+..+++ .+...+++..+.++.+.+++ +.++..+..++|.+.|++. ...+
T Consensus 822 l~av~~~~------~i~~~~~~~~~~~sT~~-gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~~~~~ 891 (972)
T PRK06149 822 LGAVITRR------EIAEALEAEGYFFSSTG-GSPVSCRIGMAVLDVLREEK---LQENARRVGDHLKARLEALADRHPL 891 (972)
T ss_pred eEEEEEcH------HHHhhhccCCcccCCCC-CCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 58888887 67776653 11212222 34445555555677765543 3556666667777777652 1222
Q ss_pred eeC--CCCCeeEEecCCCC----CCC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHH
Q 013217 316 VSG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 386 (447)
Q Consensus 316 ~~~--~~~~~~~~v~~~~~----~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~ 386 (447)
+.. +..- +.-+.+... .-+ ...+.+.|.++||.+... + .....||+.++...+ ++|+++
T Consensus 892 i~~vrG~Gl-~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~---g----~~~~vl~~~Ppl~it----~~~id~ 959 (972)
T PRK06149 892 IGAVHGMGL-YLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT---G----DHLNILKIKPPLCLD----RESADF 959 (972)
T ss_pred eEEEeecce-EEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec---C----CCCCEEEEECCCcCC----HHHHHH
Confidence 221 1111 222233110 001 245777788899998532 1 113479998887666 999999
Q ss_pred HHHHHHHHHHH
Q 013217 387 IADFIHEGVEI 397 (447)
Q Consensus 387 l~~~i~~~l~~ 397 (447)
+.+++.+++..
T Consensus 960 ~~~~l~~~l~~ 970 (972)
T PRK06149 960 FVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHh
Confidence 99999999863
No 358
>PRK07481 hypothetical protein; Provisional
Probab=99.31 E-value=5.2e-09 Score=105.20 Aligned_cols=201 Identities=16% Similarity=0.218 Sum_probs=117.9
Q ss_pred CCcEEEEcCC-CCCCC-CC----hHHHHHHHHHhCCEEEEehhhhcccccccc-CC-CCCC-cccEEEeCCCcccCCC--
Q 013217 169 RPKLIIAGAS-AYPRD-FD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRGP-- 237 (447)
Q Consensus 169 ~~klii~~~~-~~~~~-~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~-~~~~-~~Di~~~s~~K~l~Gp-- 237 (447)
++.+|++.+. ..++. .+ +++++++|++||+++|.|+++ .|+--.+. .. .-++ ..|+++.+ |.++|.
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~ 289 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVV-TGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYV 289 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehh-hCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCc
Confidence 4567777632 12232 22 689999999999999999997 44422221 00 0011 26998886 998653
Q ss_pred CCceEEeecCCcchhhHHHHhhhc------cCC-CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 238 RGGMIFFKKDPVLGVELESAINNA------VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 238 ~gG~i~~~~~~~~~~~~~~~i~~~------~~~-~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
+.|.+++++ ++.+.+... ... ++.+ .++..+++..+.++.+.+++ ..++..+..++|.+.|++
T Consensus 290 Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~ 359 (449)
T PRK07481 290 PLGATMVNA------RIADAFEANADFGGAIMHGYTYS-GHPVACAAALATLDIVVRED---LPANAAKRGAYLLEGLQP 359 (449)
T ss_pred CceEEEEcH------HHHHHHhccCccccccccCCCCC-CCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHH
Confidence 457777777 676666432 111 1222 24445555555677665443 355666667777777765
Q ss_pred C--CcEeeeC--CCCCeeEEecCCCC-----CCC-----HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCcccc
Q 013217 311 L--GYKLVSG--GSDNHLVLVDLRPM-----GID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 376 (447)
Q Consensus 311 ~--g~~~~~~--~~~~~~~~v~~~~~-----~~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~ 376 (447)
. ...++.. +.. .+.-+.+... ..+ ...+...|.++||.+... ...+|++++...|
T Consensus 360 l~~~~~~i~~vrG~G-lm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------g~~i~l~Ppl~it 428 (449)
T PRK07481 360 LKERFELVGDVRGKG-LMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS----------GTKIILSPPLVIQ 428 (449)
T ss_pred HhhcCCCeEEEeecc-eEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec----------CCEEEEECCCCCC
Confidence 2 2222221 111 1222333211 001 234666778899998531 1358998776666
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 013217 377 RGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 377 ~g~~~~di~~l~~~i~~~l~~ 397 (447)
++|++++.+++.+++..
T Consensus 429 ----~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 429 ----REDVDRIVDALDAGLSA 445 (449)
T ss_pred ----HHHHHHHHHHHHHHHHh
Confidence 99999999999999874
No 359
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.30 E-value=2.1e-09 Score=107.68 Aligned_cols=308 Identities=16% Similarity=0.127 Sum_probs=163.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc-CCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH 110 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~-~pg 110 (447)
-.|.|.+|+.+.+.... .+ . ... ..+....+++.+++... + . ....+||++|+.+++.... -.|
T Consensus 65 ~~p~v~~Ai~~q~~~~~--~~------~-~~~--~~~~~la~~l~~~~p~~-~-~--v~f~~sGseA~e~AlklAr~~tg 129 (431)
T PRK06209 65 AYPPVVEAVREALQDGC--NF------T-RPS--AIELDAAESFLELIDGA-D-M--VKFCKNGSDATSAAVRLARAYTG 129 (431)
T ss_pred CCHHHHHHHHHHHHhCc--CC------C-CCC--HHHHHHHHHHHHhCCcc-c-e--EEEecCHHHHHHHHHHHHHHHhC
Confidence 37889999888776421 11 1 011 12212234666666321 1 1 2346899999998887432 123
Q ss_pred -CEEEEec-CC-CCcc-cCCCccccccccccccce--e--EEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEcCCCC
Q 013217 111 -DRIMGLD-LP-HGGH-LSHGFMTPKRRVSGTSIY--F--ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAY 180 (447)
Q Consensus 111 -d~Vl~~~-~~-~~~~-~~~~~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~id~~~l~~~~~~~--~~klii~~~~~~ 180 (447)
.+|+... -. |+.+ ..|+.. .. ..+.. . ....++ .-|+++++++++.. ++.+|++. |.+
T Consensus 130 r~~i~~~~~~~~h~~~~~~~g~~----~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~E-pv~ 197 (431)
T PRK06209 130 RDLVARCADHPFFSTDDWFIGTT----PM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILE-PAT 197 (431)
T ss_pred CCeEEEeccCccccccccccccC----CC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEc-ccc
Confidence 4565541 11 1101 001110 00 00100 0 011111 23789999888642 34566665 333
Q ss_pred CC---CCChHHHHHHHHHhCCEEEEehhhhcccccccc-CCCCCC-cccEEEeCCCcccCC-CCCceEEeecCCcchhhH
Q 013217 181 PR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVEL 254 (447)
Q Consensus 181 ~~---~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~~~~-~~Di~~~s~~K~l~G-p~gG~i~~~~~~~~~~~~ 254 (447)
+. ...+++|.++|++||+++|+|++| .|+...+. ...-++ ..|++++ .|.++| ..+|++++++ ++
T Consensus 198 g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t~--gK~lggG~p~~av~~~~------~i 268 (431)
T PRK06209 198 ADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSCF--GKALGNGFAVSALAGKR------EY 268 (431)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceeee--hhhhcCCcccEEEEEHH------HH
Confidence 22 334899999999999999999998 66532210 000011 2587665 599864 4568888877 66
Q ss_pred HHH--hhh----ccC-CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----CCcEee--eCCCC
Q 013217 255 ESA--INN----AVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLV--SGGSD 321 (447)
Q Consensus 255 ~~~--i~~----~~~-~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~--~~~~~ 321 (447)
.+. +.. ..+ .+..-++++..+++..++++.+.+++ ..+++.++.++|++.|++ .++... ..+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~ 345 (431)
T PRK06209 269 MELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRP 345 (431)
T ss_pred HhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecce
Confidence 664 211 111 11222345566777777888876554 356666667777777654 344321 11221
Q ss_pred CeeEEecCCCCCCCH----HHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 322 NHLVLVDLRPMGIDG----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 322 ~~~~~v~~~~~~~~~----~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
..+.++...+.+... ..+.+.|.+.||.+ | .++++ ..+| ++|++++.+++.+++..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-----p---------~l~is--~~ht----~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 346 CCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLM-----P---------SLVVS--YAHG----DADIERTIDAVHGALGV 405 (431)
T ss_pred EEEEEecCCcccCCcHHHHHHHHHHHHHCCccc-----c---------ccccc--ccCC----HHHHHHHHHHHHHHHHH
Confidence 122222111111111 24556677889975 1 14444 3445 99999999999999986
Q ss_pred H
Q 013217 398 T 398 (447)
Q Consensus 398 ~ 398 (447)
.
T Consensus 406 ~ 406 (431)
T PRK06209 406 Y 406 (431)
T ss_pred H
Confidence 5
No 360
>PRK07483 hypothetical protein; Provisional
Probab=99.29 E-value=5.4e-09 Score=104.86 Aligned_cols=221 Identities=18% Similarity=0.167 Sum_probs=126.4
Q ss_pred HHHHHHhhh---hCCcEEEEcCCC--CCC-CC-C---hHHHHHHHHHhCCEEEEehhhhcccccccc-CC-CCCC-cccE
Q 013217 159 DMLEKTAIL---FRPKLIIAGASA--YPR-DF-D---YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 225 (447)
Q Consensus 159 ~~l~~~~~~---~~~klii~~~~~--~~~-~~-~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~-~~~~-~~Di 225 (447)
+++++++.. .++.+|++.+-. .++ .. + +++++++|++||+++|+|+++. |+--.+. .. .-++ ..|+
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDi 264 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDL 264 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCe
Confidence 566665542 245677776322 223 11 1 6899999999999999999974 4422221 10 0011 2689
Q ss_pred EEeCCCcccCCC--CCceEEeecCCcchhhHHHHhhhcc---CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 226 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 226 ~~~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~~---~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
++++ |.+.|. +.|.+++++ ++.+.+.... ..+.+-+.+...+++..+.++.+.+++ +.++..+.
T Consensus 265 v~~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~---l~~~~~~~ 333 (443)
T PRK07483 265 VTIA--KGLGAGYQPIGAVLASD------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG---LLANVRAR 333 (443)
T ss_pred eeeh--hhhccCccccEEEEEcH------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 9886 998644 467777877 6766664321 111111234455555555677665544 35666677
Q ss_pred HHHHHHHHHH--CCcEeeeC--CCCCeeEEecCCCC-------CC---CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCe
Q 013217 301 CRALASRLVE--LGYKLVSG--GSDNHLVLVDLRPM-------GI---DGARVEKILDMASITLNKNSVPGDKSALVPGG 366 (447)
Q Consensus 301 ~~~l~~~L~~--~g~~~~~~--~~~~~~~~v~~~~~-------~~---~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 366 (447)
.++|.+.|++ ....++.. +.. .+.-+.+... .. ....+.+.+.++||.+.... +......+..
T Consensus 334 g~~l~~~L~~l~~~~~~i~~vRG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~~~~~~~~~ 410 (443)
T PRK07483 334 GEQLRARLRERLGQHPHVGDIRGRG-LFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMG--GTIDGVRGDH 410 (443)
T ss_pred HHHHHHHHHHHHhcCCCeeeEeecc-cEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecC--ccccCCCCCE
Confidence 7777777764 12222221 111 1122232110 00 12356677788999985310 0000011347
Q ss_pred EEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 367 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 367 iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
||+.++...+ ++|++++.+++.++|...
T Consensus 411 l~~~PpL~it----~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 411 VLLAPPFIIT----AAQIDEIVERLGDAIDAA 438 (443)
T ss_pred EEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 9999887776 999999999999999754
No 361
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.29 E-value=7.7e-09 Score=104.25 Aligned_cols=322 Identities=17% Similarity=0.119 Sum_probs=173.4
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
.-.|.|.+++.+.+.+- ..+... .+ ..+ .+....+++.+++....+. ....+||++|+.+++....
T Consensus 72 h~~p~v~~Ai~~ql~~l-~~~~~~--~~-~~~----~~~~lae~L~~~~p~~~~~---v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 72 HQVPELDEAIREQLNKI-AHSTLL--GL-ANV----PSILLAEKLIEVVPEGLKK---VFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCCHHHHHHHHHHHHhC-CCcccc--cc-CCH----HHHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 34788888888777641 111110 01 111 1112335676776432221 3446899999998876432
Q ss_pred ----CCC-CEEEEecCCCCcccCCCccccccccccccc------------eeEEEecccC---CCCC------CCCHHHH
Q 013217 108 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD---ESTG------LVDYDML 161 (447)
Q Consensus 108 ----~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~---~~~~------~id~~~l 161 (447)
.+| .+|+...-.|.|... + .+.+++. ....++++.. +... .-+++++
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~t~-~------als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGDTI-G------AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred HhcCCCCCcEEEEECCcCCcccH-H------hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 233 578887766544210 0 0111110 0111222210 0000 1235667
Q ss_pred HHHhhh--hCCcEEEEcC--CCCCCC--CC---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEeC
Q 013217 162 EKTAIL--FRPKLIIAGA--SAYPRD--FD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTT 229 (447)
Q Consensus 162 ~~~~~~--~~~klii~~~--~~~~~~--~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~s 229 (447)
++.++. .++.+|++.+ ...++. .+ +++++++|+++|+++|+|+++ .|+--.+.. . ..++ ..|+++++
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~~g 292 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMTAG 292 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeeeee
Confidence 777753 2456777764 122231 12 589999999999999999997 554222211 0 0011 26888765
Q ss_pred CCcccCCC--CCceEEeecCCcchhhHHHHhhh------ccCC-CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 230 THKSLRGP--RGGMIFFKKDPVLGVELESAINN------AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 230 ~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~------~~~~-~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
|.|+|. +.|.+++++ ++.+.+.. ..+. ++.++ +...+++..+.++.+.+++ +.+++.+.
T Consensus 293 --K~l~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~~~---l~~~~~~~ 360 (460)
T PRK06916 293 --KGLTGGYLPIAITVTTD------EIYNAFYGDYEEQKTFFHGHSYTG-NPLGCAVALANLELYEKTN---LIEQVARK 360 (460)
T ss_pred --hhhhcCccccceeeecH------HHHHHhhccccccCccccCCCCCC-CHHHHHHHHHHHHHHHhcc---HHHHHHHH
Confidence 988543 457777777 66665532 1112 22222 4445555555677665444 45667777
Q ss_pred HHHHHHHHHHC-CcEeeeC--CCCCeeEEecCCCCC-------CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeE
Q 013217 301 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGI 367 (447)
Q Consensus 301 ~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 367 (447)
.++|.+.|++. ....+.. +... +.-+.+.... .+ ...+...|.++||.+... ...+
T Consensus 361 g~~l~~~l~~l~~~~~v~~vrG~Gl-m~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~l 429 (460)
T PRK06916 361 TEYVATQLEDLFALKHVGDIRQLGL-MVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL----------GNTI 429 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEeecCCc-eeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec----------CCEE
Confidence 77787777662 1221211 1111 1222222110 01 245667788899998431 2479
Q ss_pred EEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 368 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 368 Rig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
|+.++...+ ++|++++.+++.+++...
T Consensus 430 ~~~Ppl~it----~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 430 VFMPPLAST----IDELDEMLRILYKAISDV 456 (460)
T ss_pred EEeCCcccC----HHHHHHHHHHHHHHHHhh
Confidence 998777666 999999999999998743
No 362
>PRK06917 hypothetical protein; Provisional
Probab=99.29 E-value=7.5e-09 Score=103.95 Aligned_cols=331 Identities=15% Similarity=0.119 Sum_probs=176.3
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc---
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 107 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~--- 107 (447)
+-.|.|.+++.+.+... ...++. .+ . . +.+....+++.+++....+ + ...++|||+|+.+++....
T Consensus 47 h~hp~v~~Ai~~ql~~~-~~~~~~-~~-~-~----~~~~~lae~L~~~~p~~~~-~--v~f~~sGsEAve~AlklAr~~~ 115 (447)
T PRK06917 47 HGVKEIADAIKEQAEEV-SFVYRS-QF-T-S----EPAEKLAKKLSDLSPGDLN-W--SFFVNSGSEANETAMKIAIQHF 115 (447)
T ss_pred CCCHHHHHHHHHHHhhC-cCcccc-cc-C-C----HHHHHHHHHHHHhCCCCCC-E--EEEeCChHHHHHHHHHHHHHHH
Confidence 34799999988877642 111111 11 1 1 1122233566666643222 2 2345899999998887541
Q ss_pred ----CCC-CEEEEecCCCCcccCCCccccccccccccc------------eeEEEecccCCC---CC------CCCHHHH
Q 013217 108 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG------LVDYDML 161 (447)
Q Consensus 108 ----~pg-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~---~~------~id~~~l 161 (447)
.+| .+|+...-.|.|... + .+...+. .+..++.+.... +. .-|.+.+
T Consensus 116 ~~rg~t~r~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 188 (447)
T PRK06917 116 QERGIQGKHKILSRWMSYHGITM-G------ALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188 (447)
T ss_pred HhcCCCCCCEEEEECCCcCCccH-H------HHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence 133 678887655433310 0 0011110 011111111000 00 0134667
Q ss_pred HHHhhhh---CCcEEEEcCCC--CCC--CCC---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEEEe
Q 013217 162 EKTAILF---RPKLIIAGASA--YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 228 (447)
Q Consensus 162 ~~~~~~~---~~klii~~~~~--~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~~~ 228 (447)
+++++.+ ++.+|++.+-. .++ ..+ ++++.++|++||+++|+|+++. |+--.+.. . .-++ ..|++++
T Consensus 189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~ 267 (447)
T PRK06917 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL 267 (447)
T ss_pred HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe
Confidence 7777642 45677776321 222 112 5899999999999999999984 54222211 0 0011 2588877
Q ss_pred CCCcccCCC--CCceEEeecCCcchhhHHHHhhhc---cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHH
Q 013217 229 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 303 (447)
Q Consensus 229 s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~---~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~ 303 (447)
+ |.++|. +.|.+++++ ++.+.+... .+.+.+-+.+...+++..+.++.+.+++ +.+++.+..++
T Consensus 268 g--K~l~~G~~Pi~a~~~~~------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~ 336 (447)
T PRK06917 268 G--KGLGAGYTPIAATVVSD------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHN---LPEKAAEKGEY 336 (447)
T ss_pred e--ehhccCCcceEEEEEcH------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHH
Confidence 5 999653 467777777 676665432 1121111234555666556777665444 45666777777
Q ss_pred HHHHHHHC--CcEeeeC--CCCCeeEEecCCCC-----CC-----CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEE
Q 013217 304 LASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-----GI-----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRI 369 (447)
Q Consensus 304 l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~-----~~-----~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 369 (447)
|.+.|++. ...++.. +.. .+.-+.+... .. ....+.+.|.++||.+.... ..........+|+
T Consensus 337 l~~~L~~l~~~~~~i~~vrG~G-l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~~g~~~~~i~l 413 (447)
T PRK06917 337 LIKGLQKVQQQSTIIGDVRGKG-LLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAV--AGQDGKEGDAVII 413 (447)
T ss_pred HHHHHHHHHhcCCCEEEEeecc-eEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecc--cccCCCCCCEEEE
Confidence 77777652 1222221 111 1222333110 00 13446667788999985320 0000011357999
Q ss_pred ecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 370 GSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 370 g~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
.++...| ++|++++++++.+++...
T Consensus 414 ~Ppl~it----~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 414 APPMTIT----YSELDELLSIFAKSVEEM 438 (447)
T ss_pred ECCCcCC----HHHHHHHHHHHHHHHHHH
Confidence 9887777 999999999999999754
No 363
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.28 E-value=1.2e-08 Score=102.82 Aligned_cols=215 Identities=14% Similarity=0.098 Sum_probs=120.8
Q ss_pred CHHHHHHHhhh--hCCcEEEEcC-C-CCCCC--CC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CCC-CCC-ccc
Q 013217 157 DYDMLEKTAIL--FRPKLIIAGA-S-AYPRD--FD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCD 224 (447)
Q Consensus 157 d~~~l~~~~~~--~~~klii~~~-~-~~~~~--~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~-~~~-~~D 224 (447)
+++.+++.+.. .++.+||+.+ . ..++. .+ +++++++|++||+++|+|+++ .|+--.+. +.. -.+ ..|
T Consensus 222 ~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~-TGfGRtG~~~a~e~~gv~PD 300 (472)
T PRK08742 222 AADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIA-TGFGRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCCCccchHHHhcCCCCC
Confidence 35667777653 2456677764 1 22331 12 589999999999999999997 44322221 100 011 269
Q ss_pred EEEeCCCcccCCC--CCceEEeecCCcchhhHHHHhhhc-----cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHH
Q 013217 225 VVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 297 (447)
Q Consensus 225 i~~~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~-----~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~ 297 (447)
+++++ |.|+|. +.|.+++++ ++.+.+... ...+.+-+.+...+++..+.++.+.++++ .++.
T Consensus 301 iv~~g--Kgl~gG~~Plaav~~~~------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l---~~~~ 369 (472)
T PRK08742 301 LLCLS--KGLTGGFLPLSAVLATQ------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDV---IARN 369 (472)
T ss_pred EEEEc--ccccCCCCCcceeeccH------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCH---HHHH
Confidence 99986 998643 457777777 566655321 11111112345556666667777665554 3333
Q ss_pred HHHHHHHHHHHHHC-CcEeeeC--CCCCeeEEecCCCCC-------CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCC
Q 013217 298 VSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVP 364 (447)
Q Consensus 298 ~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 364 (447)
.+..++|.+.++.. ...++.+ +.. .+.-+.+.... .+ ...+.+.+.++||.+... .
T Consensus 370 ~~~g~~l~~~~~~~~~~~~i~dvRG~G-l~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------g 438 (472)
T PRK08742 370 QPTAARMTQLAAQIGEHPHVADVRQAG-MVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----------G 438 (472)
T ss_pred HHHHHHHHHHHHHHhcCCCeeeEeccc-eEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----------C
Confidence 33344444333221 1222221 111 12222332110 00 134566677899998531 2
Q ss_pred CeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 365 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 365 ~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+.||+.++...+ ++|++++.++|.++|...
T Consensus 439 ~vi~~~PpL~it----~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 439 DVLYWMPPYCVD----EAQLALLADTTRHAIDEA 468 (472)
T ss_pred CEEEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 479998887766 999999999999999754
No 364
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.28 E-value=2.8e-09 Score=99.36 Aligned_cols=304 Identities=16% Similarity=0.173 Sum_probs=174.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcH-HHHHHHHHHh-cCC
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKP 109 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al-~~p 109 (447)
.|..+++.....+.. ..|..|. |...+.+.-+.+.+.+.+.+.=| .+..+ -+|..|+|+ .|+..++.-+ ..+
T Consensus 87 fp~Dai~RA~~~L~~--~gGs~Ga--YS~SqGv~~vR~~VA~~I~rRDG-~p~~p-~dI~LT~GAS~ai~~il~l~~~~~ 160 (475)
T KOG0258|consen 87 FPTDAIKRAKRILND--CGGSLGA--YSDSQGVPGVRKHVAEFIERRDG-IPADP-EDIFLTTGASPAIRSILSLLIAGK 160 (475)
T ss_pred CCHHHHHHHHHHHHh--cCCcccc--cccccCChhHHHHHHHHHHhccC-CCCCH-HHeeecCCCcHHHHHHHHHHhcCC
Confidence 566666666666654 3344443 44445555666555666666667 33223 245568887 7777777666 467
Q ss_pred CCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCC-CCCCCHHHHHHHhhh----hCCcEEEEcCCCCCC--
Q 013217 110 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL----FRPKLIIAGASAYPR-- 182 (447)
Q Consensus 110 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~~~~----~~~klii~~~~~~~~-- 182 (447)
.|-|+++-|.|+=+ ...+...|. ..++|-+|++ +|.+|.++|++..++ .+|+++++-.|.||+
T Consensus 161 ~~GvliPiPQYPLY--------sAti~l~~~--~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq 230 (475)
T KOG0258|consen 161 KTGVLIPIPQYPLY--------SATISLLGG--TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQ 230 (475)
T ss_pred CCceEeecCCCchh--------HHHHHHhCC--cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccch
Confidence 88999998876422 223444444 5567767754 689999999987654 367766555566665
Q ss_pred ---CCChHHHHHHHHHhCCEEEEehhhhcccccccc--CC----------CCCC-cc-cEEEeCCCccc---CCCCCceE
Q 013217 183 ---DFDYPRMRQIADAVGALLMMDMAHISGLVAASV--VA----------DPFK-YC-DVVTTTTHKSL---RGPRGGMI 242 (447)
Q Consensus 183 ---~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~--~~----------~~~~-~~-Di~~~s~~K~l---~Gp~gG~i 242 (447)
...+++|..+|.+.|+.++.|+++ -..++.+. +. .+.+ .. -+...|+||.+ +|.|||++
T Consensus 231 vls~e~ie~i~~fa~~~~l~llaDEVY-Q~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 231 VLSEENIEGIICFAAEEGLVLLADEVY-QDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred hhcHHHHHHHHHHHHHcCeEEechHHH-HhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 346899999999999999999984 23233321 10 1111 11 14456778876 68999987
Q ss_pred EeecCCcchhhHHHHh------------------hhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHH
Q 013217 243 FFKKDPVLGVELESAI------------------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 304 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i------------------~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l 304 (447)
=+-+-. ++..+.+ +..+.|-..|.++.....+ +-+.....+.++++.+
T Consensus 310 Ev~n~~---prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-----------Ekd~il~~l~~ra~l~ 375 (475)
T KOG0258|consen 310 ESLNRD---PRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-----------EKDGILSSLRSRAKLT 375 (475)
T ss_pred ecccCC---hhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhh-----------hhHhHHHHHHHHhHHH
Confidence 432210 0222111 1122233344444433221 1233455677778888
Q ss_pred HHHHHH-CCcEeeeCCCCCeeEE--ecCCC--------CCCCHHH--HHHHHhhcCeEEccCCCCCCCCCCCCC--eEEE
Q 013217 305 ASRLVE-LGYKLVSGGSDNHLVL--VDLRP--------MGIDGAR--VEKILDMASITLNKNSVPGDKSALVPG--GIRI 369 (447)
Q Consensus 305 ~~~L~~-~g~~~~~~~~~~~~~~--v~~~~--------~~~~~~~--~~~~L~~~gI~v~~~~~p~~~~~~~~~--~iRi 369 (447)
.+.+++ .|+.+... ....+.+ ++++. .++.++. +.++|+.-||.+ +||......++ .+|.
T Consensus 376 ~~~~ns~~gi~cn~~-qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcv----VPGSGFGQ~~GtyH~R~ 450 (475)
T KOG0258|consen 376 EDAFNSLEGISCNPV-QGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICV----VPGSGFGQKEGTYHFRT 450 (475)
T ss_pred HHHHhhcCceeeccC-ccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEE----ecCCCCCCCCceeEEEE
Confidence 888887 57776542 1222221 23322 1233333 456788899998 66665333333 4776
Q ss_pred ec
Q 013217 370 GS 371 (447)
Q Consensus 370 g~ 371 (447)
..
T Consensus 451 Ti 452 (475)
T KOG0258|consen 451 TI 452 (475)
T ss_pred ee
Confidence 43
No 365
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.27 E-value=1.1e-08 Score=103.26 Aligned_cols=214 Identities=14% Similarity=0.119 Sum_probs=126.5
Q ss_pred HHHHHHHhhh--hCCcEEEEcC-C-CCCCC--CC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CC-CCCC-cccE
Q 013217 158 YDMLEKTAIL--FRPKLIIAGA-S-AYPRD--FD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 225 (447)
Q Consensus 158 ~~~l~~~~~~--~~~klii~~~-~-~~~~~--~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~-~~~~-~~Di 225 (447)
++++++.+.. .+..+|++.+ . ...+. .+ +++++++|++||+++|+|+++ .|+--.+. .. ..++ ..|+
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~-TGfGRtG~~~a~~~~gv~PDi 279 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIA-VGFGRTGTMFACEQAGIRPDF 279 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh-hCcCccccchHHHhcCCCCCE
Confidence 5667777753 2456677764 1 22231 11 689999999999999999997 44321221 00 0011 2699
Q ss_pred EEeCCCcccCCC--CCceEEeecCCcchhhHHHHhhhc------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHH
Q 013217 226 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 297 (447)
Q Consensus 226 ~~~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~ 297 (447)
++++ |.|+|. +.|.+++++ ++.+.+... ...+.+-+.+...+++..+.++.+.++++ .++.
T Consensus 280 v~~g--Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l---~~~~ 348 (466)
T PRK07030 280 LCLS--KALTGGYLPLAAVLTTD------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNV---IENN 348 (466)
T ss_pred Eeee--hhccCCcccceEEEecH------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCH---HHHH
Confidence 9986 998654 467777877 676665321 11111112355556666667777765443 5566
Q ss_pred HHHHHHHHHHHHHC-CcEeeeC--CCCCeeEEecCCCCC-------CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCC
Q 013217 298 VSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVP 364 (447)
Q Consensus 298 ~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 364 (447)
.+..++|.+.|++. ....+.. +. ..+.-+.+.... .+ ...+.+.+.++|+.+... .
T Consensus 349 ~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g 417 (466)
T PRK07030 349 RALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL----------G 417 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----------C
Confidence 66667777777652 1211211 11 112223332110 01 135667778899998431 2
Q ss_pred CeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 365 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 365 ~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..+|+.++...+ ++|++++.+++.++++..
T Consensus 418 ~~i~~~Ppl~it----~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 418 SVVYFLPPYVIT----PEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CEEEEECCccCC----HHHHHHHHHHHHHHHHHH
Confidence 479998777776 999999999999999865
No 366
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.26 E-value=8.8e-10 Score=99.25 Aligned_cols=229 Identities=21% Similarity=0.258 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCCCEEEEecCC-CCcccC-CCccc-cccccccccc
Q 013217 64 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP-HGGHLS-HGFMT-PKRRVSGTSI 140 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~-~~~~~~-~~~~~-~~~~~~~~g~ 140 (447)
.|.+| .-.++.||++.+. +..|..|||.|+..++.++++|||+.|...-. |.-.-. .+... ....+.-.|.
T Consensus 67 RdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi 140 (416)
T COG4100 67 RDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGI 140 (416)
T ss_pred hhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCc
Confidence 46676 4578999999753 46788999999999999999999999865311 100000 00000 0011222334
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCCCCC-----CCChHHHHHHHHHh--CCEEEEehhhhccccc
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR-----DFDYPRMRQIADAV--GALLMMDMAHISGLVA 212 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~-~~~~~~-----~~~~~~i~~ia~~~--g~~livD~a~~~g~~~ 212 (447)
.|+.++ +. .++.+|++.+...+++ +||+|.+. +-.|.. ..+++++.++.++. +++++||.++. -++-
T Consensus 141 ~Y~~v~--Lt-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-EFvE 215 (416)
T COG4100 141 KYKAVP--LT-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-EFVE 215 (416)
T ss_pred ceeecc--cc-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-hhhh
Confidence 455555 43 3588999999999997 99999886 334443 33567777777775 68999999843 2221
Q ss_pred cccCCCCCC-cccEEEeCCCcccCCC---CCceEEeecCCcchhhHHHHhhhc-cCCCCCCCCcHHHHHHHHHHHHHhcC
Q 013217 213 ASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNA-VFPGLQGGPHNHTIGGLAVCLKHAQS 287 (447)
Q Consensus 213 ~~~~~~~~~-~~Di~~~s~~K~l~Gp---~gG~i~~~~~~~~~~~~~~~i~~~-~~~~~~g~p~~~~~aal~~al~~~~~ 287 (447)
...|.. ++|++.+|.-|.-+|. .||++..+. ++.+..... ..|++ |...-. .+ .+++++-+
T Consensus 216 ---~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~------~~ve~~~yRlTaPGI-G~e~Ga---t~-~~l~~myq 281 (416)
T COG4100 216 ---EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA------ELVEAAAYRLTAPGI-GREGGA---TL-YSLREMYQ 281 (416)
T ss_pred ---ccCccccchhhhccceeeCCCCceeeccceeechH------HHHHhhceeeecCCc-cccccc---cH-HHHHHHHh
Confidence 123433 7999999999986553 468999988 676665432 34554 211111 11 12333321
Q ss_pred hhH--HHHHHHHHHHHHHHHHHHHHCCcEeee
Q 013217 288 PEF--KVYQNKVVSNCRALASRLVELGYKLVS 317 (447)
Q Consensus 288 ~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~ 317 (447)
--| ...+.+..+-+...+..|.+.|+++.+
T Consensus 282 GlFlAPhvv~qa~Kga~fta~~le~lg~~~~P 313 (416)
T COG4100 282 GLFLAPHVVSQAVKGAHFTARFLEKLGFPVNP 313 (416)
T ss_pred hhccchHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence 111 344556666667777778888987755
No 367
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.25 E-value=1.3e-09 Score=101.68 Aligned_cols=332 Identities=13% Similarity=0.104 Sum_probs=190.7
Q ss_pred CeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHH
Q 013217 22 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 100 (447)
Q Consensus 22 ~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~ 100 (447)
..+..+++.-+|++|++.....+.+-...|++=. +.+.+.++...++ .+++.++++++.+.+.- +.+...+++....
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~-~a~~~lreLl~iPd~Y~-VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLE-EAEKDLRELLNIPDDYK-VLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCccHHHHH
Confidence 4566778888899999998887766333333221 2233444444444 67789999999987643 3444566668888
Q ss_pred HHHHHhcCCCCE--EEEecCCCCcccCCCccccccccccccceeEEEeccc-CC-CCCCCCHHHHHHHhhhhCCcEEEEc
Q 013217 101 EVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DE-STGLVDYDMLEKTAILFRPKLIIAG 176 (447)
Q Consensus 101 ~~~~al~~pgd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~id~~~l~~~~~~~~~klii~~ 176 (447)
++.+.|+.++.. |.....+..+. +.++..+...++..... .. -+..+|++... +.+ +..-|.++
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws~~a~---------~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~~~ 151 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWSEFAI---------KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVHFC 151 (365)
T ss_pred HHHHhhhcccCceeEeeeehhHhHH---------HHHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEEEe
Confidence 888898866543 54433221111 01111111011111110 00 11234554433 222 33335555
Q ss_pred CCCCC-C-CC-ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccCCCCC-ceEEeecCCcchh
Q 013217 177 ASAYP-R-DF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 252 (447)
Q Consensus 177 ~~~~~-~-~~-~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~ 252 (447)
+..+. + .+ +...+. . +.++++|++..+... +.++...|++.++.+|.+ ||-| ++++.++
T Consensus 152 ~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr-----~iDvsk~dviyagaQKnl-GpaGltvvIvr~------ 214 (365)
T COG1932 152 WNETISGVEVPELPDIG---S--DGLLVADASSAILSR-----PIDVSKYDVIYAGAQKNL-GPAGLTVVIVRP------ 214 (365)
T ss_pred cCCcccceEccCCCCCC---C--CceEEEecccHHhcC-----CCChhHcceEEEehhhcc-CccceEEEEEcH------
Confidence 32221 2 22 222221 1 278999987433322 222335799999999997 6777 9999998
Q ss_pred hHHHHhhhccC------------CCCCCCCcHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHHCCcEee--e
Q 013217 253 ELESAINNAVF------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLV--S 317 (447)
Q Consensus 253 ~~~~~i~~~~~------------~~~~g~p~~~~~aal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~--~ 317 (447)
++.+++..... ..+..||.+..+.-+...++.+...| .+...++-.++++.|.+.+.+.+|-.. .
T Consensus 215 ~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~ 294 (365)
T COG1932 215 DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVA 294 (365)
T ss_pred HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence 56555543211 23456788777777777888877554 588889999999999999988765321 1
Q ss_pred CCCCCee-EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 318 GGSDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 318 ~~~~~~~-~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
+...+.+ +.+++....++ +.+...++++|...-++ +. ..+++|++.- ++ |..++++.|.++++...+
T Consensus 295 ~~~RS~mnV~f~~~~~~ld-~~fv~eae~~gl~~lkG----hr---~vgGmRasiy--nA--~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 295 KANRSRMNVTFTLVDAELD-KGFVAEAEAAGLIYLKG----HR---SVGGLRASIY--NA--VPLEDVEALTDFMDWFEE 362 (365)
T ss_pred hhhccceeEEEEcCcHHHH-HHHHHHHHHcCCceecc----cc---CCCceeeeee--cC--CCHHHHHHHHHHHHHHHH
Confidence 2222332 33455444443 33445555667665432 22 2457999864 32 568999999999987654
No 368
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.24 E-value=1e-09 Score=103.38 Aligned_cols=237 Identities=18% Similarity=0.160 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh---cCCC----------CEEEEecCCCCcccCCCccccc
Q 013217 66 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKPH----------DRIMGLDLPHGGHLSHGFMTPK 132 (447)
Q Consensus 66 ~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al---~~pg----------d~Vl~~~~~~~~~~~~~~~~~~ 132 (447)
..|..+..+..++.|.+... ..+....|+-+|.-++.+- .-|+ +-|+-.+ ..+|+|.-
T Consensus 141 lmE~~vl~km~~ivGw~~~~--DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS--eesHYSi~----- 211 (510)
T KOG0629|consen 141 LMEEEVLAKMREIVGWEEGG--DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS--EESHYSIK----- 211 (510)
T ss_pred eehHHHHHHHHHHhCCCCCC--CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec--ccchhhHH-----
Confidence 34556667788888988642 2455567776666555432 1122 3344332 34554421
Q ss_pred cccccccce-eEEEecccCCCCCCCCHHHHHHHhhhhC-----CcEEEEc--CCCCCCCCChHHHHHHHHHhCCEEEEeh
Q 013217 133 RRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDM 204 (447)
Q Consensus 133 ~~~~~~g~~-~~~~~~~~~~~~~~id~~~l~~~~~~~~-----~klii~~--~~~~~~~~~~~~i~~ia~~~g~~livD~ 204 (447)
+...+.|.+ ..++.++.+ +.|.+++++||+.|.+-+ |-+|.++ ++.++-..|++.|+++|++|+.|++||+
T Consensus 212 kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDA 290 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDA 290 (510)
T ss_pred HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeec
Confidence 233344433 234455566 678999999999886533 4444444 2334447799999999999999999999
Q ss_pred hhhccccccccCCCCC---CcccEEEeCCCcccCCCCC-ceEEeecCCcchhhHHHHhhhcc---------------CC-
Q 013217 205 AHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV---------------FP- 264 (447)
Q Consensus 205 a~~~g~~~~~~~~~~~---~~~Di~~~s~~K~l~Gp~g-G~i~~~~~~~~~~~~~~~i~~~~---------------~~- 264 (447)
|+..|++....+...+ ..+|.++-+.||+++.|-- +.+.++.+ .+.++.+... ..
T Consensus 291 AwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~-----gll~~Cn~~~A~YLFq~dK~YdvS~DTg 365 (510)
T KOG0629|consen 291 AWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE-----GLLQRCNQMSAIYLFQQDKFYDVSYDTG 365 (510)
T ss_pred ccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH-----HHHHhhcccchhhhhccCceeecccccc
Confidence 9877776554333222 3589999999999977755 77777764 3333322110 00
Q ss_pred --CCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC-CcEeeeC
Q 013217 265 --GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 318 (447)
Q Consensus 265 --~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 318 (447)
..|.+-+.. +.-++.-++.-...||+..+++..+++++|.+.|++. |+..+..
T Consensus 366 dK~iQCGRh~D-~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~ 421 (510)
T KOG0629|consen 366 DKAIQCGRHVD-VFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE 421 (510)
T ss_pred cchhhcCcccc-HHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence 113332221 2335555554456789999999999999999999984 5555543
No 369
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.24 E-value=2.1e-08 Score=101.09 Aligned_cols=216 Identities=16% Similarity=0.188 Sum_probs=123.1
Q ss_pred CHHHHHHHhhhh-----CCcEEEEcCC-CCCCCC--C---hHHHHHHHHHhCCEEEEehhhhcccccccc-CCC-CCC-c
Q 013217 157 DYDMLEKTAILF-----RPKLIIAGAS-AYPRDF--D---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-Y 222 (447)
Q Consensus 157 d~~~l~~~~~~~-----~~klii~~~~-~~~~~~--~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~-~~~-~ 222 (447)
+.+.+++++.+. ++.+||+.+- ...+.. + ++++.++|++||+++|+|+++ .|+--.+. ... -++ .
T Consensus 214 ~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~-tGfGRtG~~~a~e~~gv~ 292 (464)
T PRK06938 214 NLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQ-SGFGRTGKMFAFEHAGII 292 (464)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCcHHHHHHhcCCC
Confidence 367788877642 3567777632 122221 1 589999999999999999997 44422221 000 011 2
Q ss_pred ccEEEeCCCcccCC-CCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q 013217 223 CDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 301 (447)
Q Consensus 223 ~Di~~~s~~K~l~G-p~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~ 301 (447)
.|+++.+ |.++| .+-|.+++++ ++ +.+......++.+ .|...+++..+.++.+.+++ ..++..+..
T Consensus 293 PDiv~~g--KglggG~PlsAv~~~~------~~-~~~~~~~~~~T~~-gnpla~Aaa~a~L~~l~~~~---l~~~~~~~G 359 (464)
T PRK06938 293 PDVVVLS--KAIGGSLPLAVVVYRE------WL-DTWQPGAHAGTFR-GNQMAMAAGSATLRYIKEHR---LAEHAAAMG 359 (464)
T ss_pred CCEEEee--ccccCCCceEEEeehh------Hh-hccCCCCCCCCCC-cCHHHHHHHHHHHHHHHHhH---HHHHHHHHH
Confidence 6999986 98854 3347777776 43 4332222222222 24445555555677665443 455666666
Q ss_pred HHHHHHHHHC--CcEeeeC--CCCCeeEEecCCCC-CC---------C---HHHHHHHHhhcCeEEccCCCCCCCCCCCC
Q 013217 302 RALASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-GI---------D---GARVEKILDMASITLNKNSVPGDKSALVP 364 (447)
Q Consensus 302 ~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~-~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 364 (447)
++|.+.|++. ...++.. +. ..+.-+.+... +. + ...+...|.++|+.+... . . ..
T Consensus 360 ~~l~~~L~~l~~~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----g--~-~~ 431 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELG----G--R-HG 431 (464)
T ss_pred HHHHHHHHHHHHhCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeec----C--C-CC
Confidence 6777766551 1222221 11 11222333211 00 1 234566777899988531 1 0 12
Q ss_pred CeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 365 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 365 ~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..||+.++...| ++|++++.+++.+++...
T Consensus 432 ~~l~~~Ppl~it----~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 432 SVVRFLPPLIIT----AEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CEEEEECCCccC----HHHHHHHHHHHHHHHHHH
Confidence 479998887776 999999999999998753
No 370
>PRK07036 hypothetical protein; Provisional
Probab=99.23 E-value=2e-08 Score=101.34 Aligned_cols=213 Identities=18% Similarity=0.183 Sum_probs=124.2
Q ss_pred HHHHHHhhh---hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccc-cCCC--CCC-cccE
Q 013217 159 DMLEKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAAS-VVAD--PFK-YCDV 225 (447)
Q Consensus 159 ~~l~~~~~~---~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~-~~~~--~~~-~~Di 225 (447)
+.+++.+.. .++.+||+.+. ...+ ..+ +++++++|++||+++|+|+++ .|+--.+ .... -++ ..|+
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~~~~~~~gv~PDi 285 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVV-TGFGRLGHFFASEAVFGIQPDI 285 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeech-hCCCcCchhhhhhhhcCCCCCE
Confidence 345555542 24567777632 2223 233 799999999999999999997 3331111 1100 111 2688
Q ss_pred EEeCCCcccCCC--CCceEEeecCCcchhhHHHHhhhc------cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHH
Q 013217 226 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 297 (447)
Q Consensus 226 ~~~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~~------~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~ 297 (447)
++++ |.++|. +.|.+++++ ++.+.+... ...+.+-+.+...+++..+.++.+.+++ ..+++
T Consensus 286 vt~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~---l~~~~ 354 (466)
T PRK07036 286 ITFA--KGLTSGYQPLGAVIISE------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREG---LCEHV 354 (466)
T ss_pred EEEc--cccccCccccEEEEEcH------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHH
Confidence 8876 998653 457777777 677665421 1122111235555666666777765444 46667
Q ss_pred HHHHHHHHHHHHHC-CcEeeeC--CCCCeeEEecCCCCC-------CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCC
Q 013217 298 VSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVP 364 (447)
Q Consensus 298 ~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 364 (447)
.+..++|.+.|++. ...++.. +.. .+..+.+.... .+ ...+...|.++||.+... .
T Consensus 355 ~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------~ 423 (466)
T PRK07036 355 REVGPYFEERLASLRELPLVGDVRGDH-LMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL----------E 423 (466)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeec-eEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec----------C
Confidence 77777777777652 1222211 111 12223332110 01 234666778899998421 1
Q ss_pred CeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 365 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 365 ~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..+|++++...| ++|++++.+++.+++...
T Consensus 424 ~~~~l~Ppl~it----~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 424 HLCVLSPPLIIT----RAQIDEIVAILRAAIEET 453 (466)
T ss_pred CEEEEeCCCcCC----HHHHHHHHHHHHHHHHHH
Confidence 368998776666 999999999999999765
No 371
>PRK06148 hypothetical protein; Provisional
Probab=99.22 E-value=2.2e-08 Score=109.90 Aligned_cols=321 Identities=15% Similarity=0.131 Sum_probs=170.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh--cCCC
Q 013217 33 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 110 (447)
Q Consensus 33 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al--~~pg 110 (447)
.|.|.+++.+.+..- . ...+|. .+ .+....+++.+++....+ . ...++|||+|+.+++... ....
T Consensus 640 hp~v~~Ai~~q~~~l-~---~~~~~~--~~----~~~~lAe~L~~~~p~~~~-~--v~f~nSGsEA~e~AlklAr~~tGr 706 (1013)
T PRK06148 640 HPRVVAAAARQAARL-N---TNTRYL--HD----AIVAYAERLTATLPDGLT-V--AFFVNSGSEANSLALRLARAHTGQ 706 (1013)
T ss_pred CHHHHHHHHHHHhhc-C---CcCCcC--CH----HHHHHHHHHHHhCCCCcC-E--EEEeCCcHHHHHHHHHHHHHhcCC
Confidence 688888888776542 1 011111 11 111223566666643222 1 234589999999887644 2234
Q ss_pred CEEEEecCCCCcccCCCcccccccccccc------------ceeEEEecccC-CCCCC-CC-------HHHHHHHhhh--
Q 013217 111 DRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLD-ESTGL-VD-------YDMLEKTAIL-- 167 (447)
Q Consensus 111 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g------------~~~~~~~~~~~-~~~~~-id-------~~~l~~~~~~-- 167 (447)
.+|++..-.|.|... + .+..++ ..+..++.+.. ...+. .| .+.+++.+..
T Consensus 707 ~~ii~~~~~YHG~t~-~------a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 779 (1013)
T PRK06148 707 RDAIVLDHAYHGTTT-E------LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA 779 (1013)
T ss_pred CeEEEEcCCccCCCc-c------hhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence 578887755444311 0 001111 00111111100 00011 11 1345555531
Q ss_pred ---hCCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhh-ccccccccCCC-CCC-cccEEEeCCCcccC
Q 013217 168 ---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVAD-PFK-YCDVVTTTTHKSLR 235 (447)
Q Consensus 168 ---~~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~-~g~~~~~~~~~-~~~-~~Di~~~s~~K~l~ 235 (447)
.++.+||+.+- ..++ ..+ ++++.++|+++|+++|+|++|. .|-+....... ..+ ..|+++.+ |.++
T Consensus 780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~g--K~lg 857 (1013)
T PRK06148 780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMG--KPIG 857 (1013)
T ss_pred ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeec--cccc
Confidence 24567777621 2223 222 6899999999999999999983 33222111110 011 26998875 9985
Q ss_pred C-CCCceEEeecCCcchhhHHHHhhhcc-CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--
Q 013217 236 G-PRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-- 311 (447)
Q Consensus 236 G-p~gG~i~~~~~~~~~~~~~~~i~~~~-~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 311 (447)
| .+.|.+++++ ++.+.+.... +.++.++ +...+++..+.++.+.+++ ..++..+..++|.+.|++.
T Consensus 858 gG~Plgav~~~~------ei~~~~~~g~~~~~Tf~g-npla~aaa~a~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~ 927 (1013)
T PRK06148 858 NGHPMGAVVTTR------EIADSFDNGMEYFNTFGG-NPVSCAIGLAVLDIIEDED---LQRNALEIGNYLLAGLRELQD 927 (1013)
T ss_pred CCcceEEEEEcH------HHHhhccCCCccccCCCC-CHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHH
Confidence 4 3447788877 6777665432 2222332 4444555555677766544 4566677777777777652
Q ss_pred CcEeeeC--CCCCeeEEecCCCCC----CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHH
Q 013217 312 GYKLVSG--GSDNHLVLVDLRPMG----ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 382 (447)
Q Consensus 312 g~~~~~~--~~~~~~~~v~~~~~~----~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~ 382 (447)
...++.. +... +.-+.+.... -+ ...+.+.|.++||.+... + + ....+|+.++...+ ++
T Consensus 928 ~~~~i~~VrG~Gl-~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g---~-~~~vlr~~Ppl~it----~~ 995 (1013)
T PRK06148 928 RFDIIGDVRGMGL-FLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---G---P-HDNVLKIRPPLIFS----RA 995 (1013)
T ss_pred hCCCceEEeeece-EEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc---C---C-CCCEEEEeCCccCC----HH
Confidence 1222211 1111 2223332110 01 234667778899998532 1 1 13579999887777 99
Q ss_pred HHHHHHHHHHHHHHH
Q 013217 383 EFVAIADFIHEGVEI 397 (447)
Q Consensus 383 di~~l~~~i~~~l~~ 397 (447)
|++++.+++++++..
T Consensus 996 ~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 996 DADHLLEVLDDVLAA 1010 (1013)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999874
No 372
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.22 E-value=6.1e-09 Score=104.27 Aligned_cols=209 Identities=20% Similarity=0.156 Sum_probs=115.7
Q ss_pred HHHHHHHhhh--hCCcEEEEcCC-CCCCC-----CChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEE
Q 013217 158 YDMLEKTAIL--FRPKLIIAGAS-AYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV 226 (447)
Q Consensus 158 ~~~l~~~~~~--~~~klii~~~~-~~~~~-----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~ 226 (447)
++++++.+.. .++.+|++.+- ..++. --+++|.++|++||+++|+|++|. |+-..|.. . .-++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4555556643 25677777622 22232 246899999999999999999985 44323211 0 0011 36898
Q ss_pred EeCCCcccCCCCCceEEeecCCcchhhHHHH-hh-hccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHH
Q 013217 227 TTTTHKSLRGPRGGMIFFKKDPVLGVELESA-IN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 304 (447)
Q Consensus 227 ~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~-i~-~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l 304 (447)
+++ |.+ |.+|++..++- .+.... .. .....++.+ .+...+++..++++.+.++++ .+++.+..++|
T Consensus 284 ~~g--K~~--~~~g~~~~~~i----~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~~l---~~~~~~~g~~l 351 (431)
T TIGR03251 284 AFG--KKT--QVCGIMAGRRV----DEVADNVFAVPSRLNSTWG-GNLVDMVRATRILEIIEEERL---VDNARVQGAHL 351 (431)
T ss_pred Eec--ccC--ccceEEecchH----HHhhhhcccCccccCCCCC-CCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence 765 765 55566654430 011111 11 111112222 344555555567777655443 44555666666
Q ss_pred HHHHHHC--CcE-eeeCCC-CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCC
Q 013217 305 ASRLVEL--GYK-LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 380 (447)
Q Consensus 305 ~~~L~~~--g~~-~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~ 380 (447)
.+.|++. ... ++.... ...+..+.+.... ....+.+.|.++||.+... ....+|+.++..++
T Consensus 352 ~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~~---------g~~~lr~~P~l~~t---- 417 (431)
T TIGR03251 352 LARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQLYREGVLLLGC---------GERSIRFRPPLTVT---- 417 (431)
T ss_pred HHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHHHHhCCeEEecC---------CCCeEEEECCccCC----
Confidence 6666541 122 222111 1223334443211 2345777888999998421 12479999988887
Q ss_pred HHHHHHHHHHHHH
Q 013217 381 EKEFVAIADFIHE 393 (447)
Q Consensus 381 ~~di~~l~~~i~~ 393 (447)
++|++++++++.+
T Consensus 418 ~~eid~~l~~l~~ 430 (431)
T TIGR03251 418 REEIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
No 373
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.22 E-value=2.4e-08 Score=91.30 Aligned_cols=314 Identities=17% Similarity=0.188 Sum_probs=166.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
..|.+++++.+....-+ ..++-+|. ....+++ +.+.++||.+. .+...+|.+|+..++.-..
T Consensus 76 chpki~~aLqeq~~kLt---lssrafYn--d~~~~f~----~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy 141 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLT---LSSRAFYN--DVLGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGY 141 (427)
T ss_pred CCHHHHHHHHHHHhHhh---hhhHHHhh--hhHHHHH----HHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHH
Confidence 36788888877665322 11222221 1223444 57889999885 3446788899988765332
Q ss_pred --C--CCCE-EEEecC-CC-CcccCCCccccccccccccce-----e-EEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 013217 108 --K--PHDR-IMGLDL-PH-GGHLSHGFMTPKRRVSGTSIY-----F-ESMPYRLDESTGLVDYDMLEKTAILFRPKLII 174 (447)
Q Consensus 108 --~--pgd~-Vl~~~~-~~-~~~~~~~~~~~~~~~~~~g~~-----~-~~~~~~~~~~~~~id~~~l~~~~~~~~~klii 174 (447)
+ |.|+ +++... .+ |-.+ ..+.+++.. | -+.|..++ .-..-|.++|+.+++..+...++
T Consensus 142 ~~K~ip~nka~il~~~~nFhGrT~--------~ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFi 212 (427)
T KOG1402|consen 142 RKKNIPKNKAKILSAENNFHGRTL--------GAISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFI 212 (427)
T ss_pred hhccCCccceeEEEecccccCcee--------eeEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEE
Confidence 2 5444 333221 11 1111 011222110 0 00110000 00123778898888775556666
Q ss_pred EcCCC-CCC-C----CChHHHHHHHHHhCCEEEEehhhhccccccccC-CCCCC--cccEEEeCCCcccCCCC--CceEE
Q 013217 175 AGASA-YPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRGPR--GGMIF 243 (447)
Q Consensus 175 ~~~~~-~~~-~----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~~~~--~~Di~~~s~~K~l~Gp~--gG~i~ 243 (447)
+.+-. -.+ . -=+++.+++|.+|++++|.|+.| .|+--.|.. ..... ..|++... |.|.|.- .+.++
T Consensus 213 vEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQ-TGl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl 289 (427)
T KOG1402|consen 213 VEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQ-TGLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVL 289 (427)
T ss_pred eeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhh-hcccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEE
Confidence 54211 112 1 22789999999999999999998 554433321 10001 24888876 8886532 24555
Q ss_pred eecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCC--c----Eeee
Q 013217 244 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--Y----KLVS 317 (447)
Q Consensus 244 ~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~----~~~~ 317 (447)
+.+ +++..+.+.....++|+ |+...+...++++.+.++ .+.++....-..|+.+|.+.. + ..+.
T Consensus 290 ~~~------~im~~~~pgeHgsTygg-NpLg~~vaiAalevi~ee---kL~era~~lG~~l~~~L~~l~~~~p~~v~~VR 359 (427)
T KOG1402|consen 290 ADD------DIMLNIKPGEHGSTYGG-NPLGCAVAIAALEVIVEE---KLVERAAKLGEILRDQLNKLQKKFPHVVKEVR 359 (427)
T ss_pred ecH------HHHhccCCCccccccCC-ChHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccccccchhheee
Confidence 555 56655555443333333 333333333466665533 345555555666777777632 2 1121
Q ss_pred CCCCCeeEEecCCCC---CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 318 GGSDNHLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 318 ~~~~~~~~~v~~~~~---~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
+ . ..+..+.+.+. +.+.-++.-.|.++|+... |.+ ...||+..|..-+ ++|+++-+++|.++
T Consensus 360 G-r-Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAk----ptH-----~~IiRfaPPL~I~----e~dl~eg~e~i~k~ 424 (427)
T KOG1402|consen 360 G-R-GLLNAIVINPSKTSGQDAWDVCLALKENGLLAK----PTH-----GNIIRFAPPLVIS----EEDLREGIEAIEKT 424 (427)
T ss_pred c-c-ceEEEEEeccccccchhHHHHHHcccccccccC----CCC-----CCeEEecCCcccC----HHHHHHHHHHHHHH
Confidence 1 1 12222223222 2333445556677888763 222 3489999886555 99999999999887
Q ss_pred HH
Q 013217 395 VE 396 (447)
Q Consensus 395 l~ 396 (447)
+.
T Consensus 425 i~ 426 (427)
T KOG1402|consen 425 IA 426 (427)
T ss_pred hc
Confidence 63
No 374
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.21 E-value=3.1e-08 Score=96.61 Aligned_cols=215 Identities=18% Similarity=0.161 Sum_probs=128.1
Q ss_pred HHHHHHHhhhhCC---cEEEEcCCCC--CC-CC-C---hHHHHHHHHHhCCEEEEehhhhccccccccC-CCC-CC-ccc
Q 013217 158 YDMLEKTAILFRP---KLIIAGASAY--PR-DF-D---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCD 224 (447)
Q Consensus 158 ~~~l~~~~~~~~~---klii~~~~~~--~~-~~-~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~~~-~~-~~D 224 (447)
.++|++++.++.| .++|+.+-.- ++ .. + ++++++||++||+++|+|++ ..|+--.|.. ... .. ..|
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi~PD 278 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGIVPD 278 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCCCCC
Confidence 6678888877543 4556542211 22 22 1 69999999999999999998 4554433311 100 00 248
Q ss_pred EEEeCCCcccCCCC--CceEEeecCCcchhhHHHHhhhc----cCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHH
Q 013217 225 VVTTTTHKSLRGPR--GGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 298 (447)
Q Consensus 225 i~~~s~~K~l~Gp~--gG~i~~~~~~~~~~~~~~~i~~~----~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~ 298 (447)
+++.+ |.|.|.- -|.+++++ ++.+.+... .+.+.+-+-|+...|+..+.++.+.+++ +.++..
T Consensus 279 i~~~a--KGLT~GY~Pl~a~l~~~------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~---l~~~~~ 347 (449)
T COG0161 279 ILCLA--KGLTGGYLPLSAVLTSD------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEED---LLERVA 347 (449)
T ss_pred eeeec--ccccccchhhHhHhhhH------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcC---HHHHHH
Confidence 98877 9886532 25556666 566655432 2333322334444444334566555444 467777
Q ss_pred HHHHHHHHHHHH--CCcEeeeCCC-CCeeEEecCCC-CC-C------CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeE
Q 013217 299 SNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLRP-MG-I------DGARVEKILDMASITLNKNSVPGDKSALVPGGI 367 (447)
Q Consensus 299 ~~~~~l~~~L~~--~g~~~~~~~~-~~~~~~v~~~~-~~-~------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 367 (447)
+...+|.+.|++ .+.+.+.+-. ...+.-+.+.. .+ . -+..+.+.+.++|+.+++. ...+
T Consensus 348 ~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~----------g~~i 417 (449)
T COG0161 348 EIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL----------GDVI 417 (449)
T ss_pred HHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec----------CCEE
Confidence 888888888886 2222333211 11222233321 11 1 1456778888999999742 2256
Q ss_pred EEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 368 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 368 Rig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
=+++|.+.| ++|++++.+.+.++++..
T Consensus 418 ~~~PPliit----~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 418 YLMPPLIIT----REEIDELVDALREALDET 444 (449)
T ss_pred EEcCCccCC----HHHHHHHHHHHHHHHHHH
Confidence 677777777 999999999999999854
No 375
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.20 E-value=1.2e-08 Score=102.10 Aligned_cols=209 Identities=13% Similarity=0.115 Sum_probs=119.0
Q ss_pred CHHHHHHHhhhh--CCcEEEEcCC-CCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccC-C---CCCC-cc
Q 013217 157 DYDMLEKTAILF--RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A---DPFK-YC 223 (447)
Q Consensus 157 d~~~l~~~~~~~--~~klii~~~~-~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~---~~~~-~~ 223 (447)
+++++++++.++ ++.+||+.+- ...+ ..+ +++++++|++||+++|+|++| .|+-..|.. . ..+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 456777777542 4566777632 2223 344 799999999999999999998 554332211 0 1111 26
Q ss_pred cEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHH
Q 013217 224 DVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 303 (447)
Q Consensus 224 Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~ 303 (447)
|+++++ |.+++ ||+++.++ .+ ..... .+.+...+.+...+++..++++.+.++++ .++..+..++
T Consensus 316 Di~t~g--K~lg~--gG~~~~~~------~~-~~~~~-~~~~~T~~gnp~~~aaa~a~L~~l~~~~l---~~~~~~~g~~ 380 (464)
T TIGR00699 316 DMVTFS--KKFQT--AGYFFHDP------AF-RPNKP-YRQFNTWMGDPSRALILREIIQEIKRKDL---LENVAHVGDY 380 (464)
T ss_pred CEEEeh--hhhcc--CCccccch------hc-cCCCC-cccccCCCCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHH
Confidence 887775 98742 24443332 22 11011 11111223345555555557777665443 4555555667
Q ss_pred HHHHHHHCC--cE-eeeC--CC-CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccC
Q 013217 304 LASRLVELG--YK-LVSG--GS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 377 (447)
Q Consensus 304 l~~~L~~~g--~~-~~~~--~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~ 377 (447)
|.+.|++.. +. ++.. +. ...++-+.+.... ....+.+.+.++||.+... ....||+.++...+
T Consensus 381 l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-~~~~i~~~~~~~Gvl~~~~---------g~~~ir~~Ppl~it- 449 (464)
T TIGR00699 381 LYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-KRDKLLKKARNNGVNIGGC---------GVKAIRLRPMLVFQ- 449 (464)
T ss_pred HHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-HHHHHHHHHHHCCcEEecC---------CCCeEEEeCCCCCC-
Confidence 777776521 32 2221 11 1223334443211 1345777778899998531 12479999887777
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 013217 378 GFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 378 g~~~~di~~l~~~i~~~l 395 (447)
++|++.+.++|.+++
T Consensus 450 ---~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 450 ---KHHADIFLEIISKII 464 (464)
T ss_pred ---HHHHHHHHHHHHHhC
Confidence 999999999998764
No 376
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.19 E-value=1.2e-07 Score=95.67 Aligned_cols=203 Identities=17% Similarity=0.211 Sum_probs=114.2
Q ss_pred CcEEEEcCC-CCCC--CCC---hHHHHHHHHHhCCEEEEehhhhcccccccc-CCC-CCC-cccEEEeCCCcccCC-CCC
Q 013217 170 PKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCDVVTTTTHKSLRG-PRG 239 (447)
Q Consensus 170 ~klii~~~~-~~~~--~~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~-~~~-~~~-~~Di~~~s~~K~l~G-p~g 239 (447)
+..||+.+- ...+ ..+ ++++.++|++||+++|+|+++ .|+--.+. ... -.+ ..|+++++ |.++| .+.
T Consensus 226 iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~-tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi 302 (459)
T PRK06931 226 PAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQ-AGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPL 302 (459)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch-hcCCcCchHHHhhhcCCCCCEEEec--ccccCCcce
Confidence 566777521 2222 112 689999999999999999997 44422221 100 011 26999886 98854 334
Q ss_pred ceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHC--CcEeee
Q 013217 240 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS 317 (447)
Q Consensus 240 G~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 317 (447)
|.+..++ ++ +.+......+++ +.|...+++..+.++.+.++++ .++..+..++|.+.|++. ...++.
T Consensus 303 ~av~~~~------~~-~~~~~~~~~~T~-~gnpla~aaala~L~~l~~~~l---~~~~~~~G~~l~~~L~~l~~~~~~i~ 371 (459)
T PRK06931 303 AVLGIKK------EF-DAWQPGGHTGTF-RGNQLAMATGLTTLKILKEENL---AQNAAERGEWLKAQLAELQKRYPCIG 371 (459)
T ss_pred eeeeeHH------HH-hhccCCCCCCCC-CCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 6666665 43 444322222222 2344555555556776655443 455666666666666551 122222
Q ss_pred C--CCCCeeEEecCCCC-C---------CC---HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHH
Q 013217 318 G--GSDNHLVLVDLRPM-G---------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 382 (447)
Q Consensus 318 ~--~~~~~~~~v~~~~~-~---------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~ 382 (447)
. +..- +.-+.+... . .+ ...+...|.++||.+... . .....+|+.++...+ ++
T Consensus 372 ~vrG~Gl-m~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----~---~~~~~l~~~Ppl~it----~~ 439 (459)
T PRK06931 372 NVRGRGL-MIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERG----G---RNGNVVRLLPPLLIT----QA 439 (459)
T ss_pred eEecCce-EEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeec----C---CCCCEEEEECCCCcC----HH
Confidence 1 1111 222233211 0 01 234566677899998531 1 113479998887777 99
Q ss_pred HHHHHHHHHHHHHHHH
Q 013217 383 EFVAIADFIHEGVEIT 398 (447)
Q Consensus 383 di~~l~~~i~~~l~~~ 398 (447)
|++++.+++.+++...
T Consensus 440 eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 440 ECEEFIDRFEQALLAA 455 (459)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998753
No 377
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.19 E-value=1.8e-09 Score=97.57 Aligned_cols=340 Identities=14% Similarity=0.143 Sum_probs=196.3
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcCCC
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 110 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~pg 110 (447)
.+|+.+.+.+...+.. |+.--...++.|..+++. ..+-+...++.+.|+..+|+.+ +.|-|.-+..++.++.+|-
T Consensus 78 LmPK~t~~~~~~eLDk-Wak~av~gH~~GkvPW~~-~De~il~l~~~iVGA~e~Evav---mNsLTvNlh~Ll~sFyKPT 152 (465)
T KOG3846|consen 78 LMPKSTRNSINAELDK-WAKCAVEGHFKGKVPWVS-IDEPILPLLAPIVGAQENEVAV---MNSLTVNLHSLLISFYKPT 152 (465)
T ss_pred cCchhhHhHHHHHHHH-HHhhhhhcccccccceee-cchhhhhhhhhhccCCchhhhh---HhhhhhHHHHHHHHhcCCc
Confidence 3588888888777653 432111111122222221 2223446788999999776522 2333333344556677765
Q ss_pred C---EEEEecCCCCcccCCCccccccccccccceeEEEecccCCC--CCCCCHHHHHHHhhhhC--CcEEEEcCCC-CCC
Q 013217 111 D---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFR--PKLIIAGASA-YPR 182 (447)
Q Consensus 111 d---~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~id~~~l~~~~~~~~--~klii~~~~~-~~~ 182 (447)
. +|+.-.-.++ +-.|. ..+.+++.|...+-...-+.|. ...+..+++.+.|+... ..+|+++... |++
T Consensus 153 ekR~KILlE~kaFP---SDhYA-iesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTG 228 (465)
T KOG3846|consen 153 EKRFKILLEKKAFP---SDHYA-IESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTG 228 (465)
T ss_pred chhhhhhhccCCCC---chHHH-HHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecc
Confidence 4 4664333333 22222 1224455554332222223332 34678888888887632 3456666554 444
Q ss_pred -CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCcccC-CCCC-ceEEeecCCc---------c
Q 013217 183 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR-GPRG-GMIFFKKDPV---------L 250 (447)
Q Consensus 183 -~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K~l~-Gp~g-G~i~~~~~~~---------~ 250 (447)
.+|+.+|...-+..|+++=.|-||+.|-++..++.+. +|+.+-...|+++ |+.| |-+++.+... .
T Consensus 229 Q~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWg---VDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GW 305 (465)
T KOG3846|consen 229 QYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWG---VDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGW 305 (465)
T ss_pred cccchhhhhhcccCCCcEechhhhhhhcCCceEEeecC---CceEEEeeecccccCCCccceeeeehhhhcchhhHHhhh
Confidence 7899999966666799999999999998877666664 8999999999984 6666 6666665421 0
Q ss_pred h-hhHHHH--hhh------ccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CC--------
Q 013217 251 G-VELESA--INN------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LG-------- 312 (447)
Q Consensus 251 ~-~~~~~~--i~~------~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g-------- 312 (447)
| -+...+ ++. ......++.|..+..+|+..+++...+...++.+++-.-...+|..-++. .|
T Consensus 306 wgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~ 385 (465)
T KOG3846|consen 306 WGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTE 385 (465)
T ss_pred ccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhc
Confidence 0 011111 111 11122367888888999988888766544555555555555554443332 22
Q ss_pred ---cEeeeCC-C--CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEe-cCccccCCCCHHHHH
Q 013217 313 ---YKLVSGG-S--DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG-SPAMTTRGFSEKEFV 385 (447)
Q Consensus 313 ---~~~~~~~-~--~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig-~~~~~~~g~~~~di~ 385 (447)
+.++++. + ......+.+.. +...+.+.|.++|+.+.+. .+.+||+. .+.+++ -.|+.
T Consensus 386 Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL~krGv~~DkR---------~PNvIRvAPvpLYN~----f~Dvy 449 (465)
T KOG3846|consen 386 KLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQELHKRGVIGDKR---------RPNVIRVAPVPLYNT----FSDVY 449 (465)
T ss_pred ceeEEEeCCcccccccceEEEEeCC---CchHHHHHHHHcCeecccc---------CCCceEeecchhhcc----HHHHH
Confidence 3333331 1 11122222322 2367888999999998754 35689997 456777 89999
Q ss_pred HHHHHHHHHHHHH
Q 013217 386 AIADFIHEGVEIT 398 (447)
Q Consensus 386 ~l~~~i~~~l~~~ 398 (447)
++..++.+++...
T Consensus 450 ~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 450 IFVNALNEAMDKL 462 (465)
T ss_pred HHHHHHHHHHHHh
Confidence 9999988887643
No 378
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.18 E-value=9.2e-10 Score=104.64 Aligned_cols=297 Identities=16% Similarity=0.149 Sum_probs=160.2
Q ss_pred HHHHHcCCCCCccceeeecCCcH-HHHHHHHHHhc--CCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccC
Q 013217 74 RALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 150 (447)
Q Consensus 74 ~~~~~~g~~~~~~~~~v~~~sGs-~a~~~~~~al~--~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (447)
.+-+..|+....- +.+. .-.| .++...+.++- ..++.|+.+..+|-+.+ +.+...|....+++-...
T Consensus 64 d~~~~~G~~~~~~-~~~v-P~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~--------kai~~AGl~~~vV~~~~~ 133 (389)
T PF05889_consen 64 DALRLAGLRSVKS-CFVV-PMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCF--------KAIERAGLEPVVVENVLE 133 (389)
T ss_dssp HHHHHTTHTTHCE-EEEE-SS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHH--------HHHHHTT-EEEEE-EEEE
T ss_pred HHHHHcCCccccc-eEEE-ecccccHHHHHHHHHhcccCCceEEEeeccccchH--------HHHHhcCCeEEEeeccCC
Confidence 3445678773221 2232 3333 45555566663 56788888776654322 345566665555554444
Q ss_pred CCCCCCCHHHHHHHhhhhC--CcEEEEc-CC-CCCCCCC-hHHHHHHHHHhCCEEEEehhhhcccccccc---C--CCCC
Q 013217 151 ESTGLVDYDMLEKTAILFR--PKLIIAG-AS-AYPRDFD-YPRMRQIADAVGALLMMDMAHISGLVAASV---V--ADPF 220 (447)
Q Consensus 151 ~~~~~id~~~l~~~~~~~~--~klii~~-~~-~~~~~~~-~~~i~~ia~~~g~~livD~a~~~g~~~~~~---~--~~~~ 220 (447)
++.-..|.+.+++.+++.. +.+.+++ .+ .+|+..| +++|+++|+++|++.++..|++. -.... . ....
T Consensus 134 ~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgv--Q~~~~~~~i~~a~~~ 211 (389)
T PF05889_consen 134 GDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGV--QSSKCMHLIQQAWRV 211 (389)
T ss_dssp TTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTT--T-HHHHHHHHHHHHH
T ss_pred CCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhh--hHHHHHHHHHHHHhc
Confidence 4444678899999887643 3455555 33 4566555 99999999999999999998654 00000 0 0001
Q ss_pred CcccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhccCCCC-CCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 013217 221 KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 299 (447)
Q Consensus 221 ~~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~-~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~ 299 (447)
+..|+++-|+-|.|-.|-||.++.... +.....+... +|+. ..+|..... .-+..+...+|...+....+
T Consensus 212 GRvda~vqS~dkNF~VPvGgai~As~~----~~~i~~vs~~-YpGRas~sp~ld~~----itLl~LG~~g~~~ll~~r~~ 282 (389)
T PF05889_consen 212 GRVDAFVQSTDKNFMVPVGGAIMASFD----PSGILAVSKE-YPGRASASPSLDLF----ITLLSLGCTGYGALLKERKA 282 (389)
T ss_dssp STCSEEEEEHHHHHCEESSHEEEEESS----HHHHHHHHHT-SHSHBTSHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeecCCCEEecCCCcEEEecC----HHHHHHHHHH-hhhhhhcccchHHH----HHHHHHhhhHHHHHHHHHHH
Confidence 136889999999998888855554432 1566666553 3443 223332221 12223333456667777777
Q ss_pred HHHHHHHHHHH----CCcEeeeCCCCCeeEE-ecCCCCC----CCHHHHHHHHhhcCeEEccCCCCCCC------CCCCC
Q 013217 300 NCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPMG----IDGARVEKILDMASITLNKNSVPGDK------SALVP 364 (447)
Q Consensus 300 ~~~~l~~~L~~----~g~~~~~~~~~~~~~~-v~~~~~~----~~~~~~~~~L~~~gI~v~~~~~p~~~------~~~~~ 364 (447)
.-.++.++|++ .|-++.. -+.||..+ +++.... -+..++...|..+||.-.....|... +.+..
T Consensus 283 ~f~~l~erl~~~aee~~e~ll~-~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~ 361 (389)
T PF05889_consen 283 SFPYLKERLKKWAEEVGERLLE-TPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPC 361 (389)
T ss_dssp HHHHHHHHHHHHHHHTTEEBSS-STT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SS
T ss_pred HHHHHHHHHHHHHHHhhhhhcC-CCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCch
Confidence 77777777755 4544332 23455432 3333221 12457788888888763322122211 11222
Q ss_pred CeEEEecCccccCCCCHHHHHHHHHHHHHHHH
Q 013217 365 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 365 ~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~ 396 (447)
.++-+. .+.|+++||++.+++.|+++++
T Consensus 362 ~Ylt~A----saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 362 PYLTAA----SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SEEEEE----E-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHhCCCHHHHHHHHHHHHHHhC
Confidence 455552 3468889999999999999874
No 379
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.13 E-value=7.1e-08 Score=90.80 Aligned_cols=343 Identities=17% Similarity=0.122 Sum_probs=159.9
Q ss_pred cCeeEecCCCCCCHHHHHHHhhhhh---ccC-CCCCCCCccc-CchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCc
Q 013217 21 KSLELIASENFTSRAVMEAVGSCLT---NKY-SEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 95 (447)
Q Consensus 21 ~~i~l~~~~n~~~~~v~~a~~~~~~---~~~-~~g~~~~~~~-~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sG 95 (447)
..|+|.-+-.-.+++=++.-...+. ..+ .......|.| |+...+.+.. +..++++|++++++ .|. .+.
T Consensus 23 ~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r----~l~a~llgv~~~~v--iv~-gNS 95 (425)
T PF12897_consen 23 KGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEAR----ELFAELLGVPPENV--IVG-GNS 95 (425)
T ss_dssp TT--EES---S--HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHH----HHHHHHHTS-GGGE--EE--SS-
T ss_pred cCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHH----HHHHHHhCCCHHHE--EEe-ccc
Confidence 5566665555556665554333332 111 1111234777 7766666654 68899999998754 222 222
Q ss_pred H-HHHHHHH-HHh----cC--------CCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHH
Q 013217 96 S-PANFEVY-TAI----LK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 161 (447)
Q Consensus 96 s-~a~~~~~-~al----~~--------pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l 161 (447)
| .-+.-++ .++ .. +.=+.|++.|-|.-|+. .+...|. +.++++.++ ..+|+|.+
T Consensus 96 SL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~Gi--emi~VpM~~--dGPDmD~V 163 (425)
T PF12897_consen 96 SLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFGI--EMIPVPMTE--DGPDMDMV 163 (425)
T ss_dssp HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT---EEEEEEEET--TEE-HHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhCc--EEEecCCCC--CCCCHHHH
Confidence 2 3332222 222 11 12256788877776653 3345564 555555552 35999999
Q ss_pred HHHhhh-hCCcEEEEc--CCCCCC-CCCh---HHHHHH-HHHhCCEEEEehhhhccccccccC-CCCCC---------cc
Q 013217 162 EKTAIL-FRPKLIIAG--ASAYPR-DFDY---PRMRQI-ADAVGALLMMDMAHISGLVAASVV-ADPFK---------YC 223 (447)
Q Consensus 162 ~~~~~~-~~~klii~~--~~~~~~-~~~~---~~i~~i-a~~~g~~livD~a~~~g~~~~~~~-~~~~~---------~~ 223 (447)
++++.+ ...|.|++. .||.++ ...= ++|+.+ +...+..++-|.|++...+..+.. ..+++ +.
T Consensus 164 e~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnp 243 (425)
T PF12897_consen 164 EELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNP 243 (425)
T ss_dssp HHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-T
T ss_pred HHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCC
Confidence 999854 245788887 334334 3333 444444 234689999999987766533221 11111 12
Q ss_pred c--EEEeCCCc-ccCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 224 D--VVTTTTHK-SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 224 D--i~~~s~~K-~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
| ++.+|++| ||+|-..+++..++ +-.+.+.+.......|.--.+++.-. .=|+... .+.++.++++.+.
T Consensus 244 drv~~F~STSKITf~GaGva~~aaS~------~Nl~~~~~~~~~~tIgpdKvNQLRHv-rff~d~~-gGv~aHM~kHa~i 315 (425)
T PF12897_consen 244 DRVYVFASTSKITFPGAGVAFFAASE------ANLAWIKKHLSVQTIGPDKVNQLRHV-RFFKDAE-GGVRAHMRKHAAI 315 (425)
T ss_dssp TSEEEEEESTTTS-TTSS-EEEEE-H------HHHHHHHHHHHHH-S---HHHHHHHH-HHHHSHH-THHHHHHHHHHHH
T ss_pred CeEEEEecccccccCCcceeeeecCH------HHHHHHHHHhcCceeCccHHHHHHHH-HHhcChh-hHHHHHHHHHHHH
Confidence 3 77899999 46666558888887 33333322211111122122322111 0111110 1333333333221
Q ss_pred --------HHHHHHHHH-HCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEcc--CCCCCCCCCCCCCeEEE
Q 013217 301 --------CRALASRLV-ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK--NSVPGDKSALVPGGIRI 369 (447)
Q Consensus 301 --------~~~l~~~L~-~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~--~~~p~~~~~~~~~~iRi 369 (447)
.+.|.++|. ..|+--.+.+...+++.++..+ | ....+.+++.+.||.+.. .+.|+...|. .+.|||
T Consensus 316 l~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G-~AkrvV~lakeAGV~LT~AGAtfPyg~DP~-D~nIRi 392 (425)
T PF12897_consen 316 LRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G-TAKRVVELAKEAGVALTPAGATFPYGKDPR-DSNIRI 392 (425)
T ss_dssp HHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T--HHHHHHHHHHTTEE---TTTTSGGG--TT-S-EEEE
T ss_pred HhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C-hHHHHHHHHHHhCceeCCCCCCCCCCCCCC-CCcEEe
Confidence 123344444 3344444444567888888654 4 578899999999999875 2456544443 457999
Q ss_pred ecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 370 GSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 370 g~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
..+ +-+ .+|++...+.+.-+++.+
T Consensus 393 APS-~P~----leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 393 APS-YPS----LEELETAMDVFATCVKLA 416 (425)
T ss_dssp --S-SS-----HHHHHHHHHHHHHHHHHH
T ss_pred cCC-CCC----HHHHHHHHHHHHHHHHHH
Confidence 865 444 799999999998887765
No 380
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.11 E-value=2.2e-08 Score=105.78 Aligned_cols=268 Identities=17% Similarity=0.118 Sum_probs=160.3
Q ss_pred HHHHHHHHcCCCCCccceeeecCCc-HHHHHHHHHHh-c--CCCCEEEEecCCCCcccCCCccccccccccccceeEEEe
Q 013217 71 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 146 (447)
Q Consensus 71 ~~~~~~~~~g~~~~~~~~~v~~~sG-s~a~~~~~~al-~--~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 146 (447)
-+..+++++|++-. |-....| |.+-.+++++. . ++..+|++..-.|+.++... .....+.+++++.
T Consensus 129 ~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~------~t~~~~~g~~i~~ 198 (954)
T PRK12566 129 FQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVL------RTRAEGFGFELVV 198 (954)
T ss_pred HHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHH------HHhhhcCCcEEEE
Confidence 35688999999842 2222233 33334444443 1 22568888776665443210 0011122233332
Q ss_pred cccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-ccc
Q 013217 147 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 224 (447)
Q Consensus 147 ~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~D 224 (447)
+++++.+.+ ++-.|++..|++.+ ..|+++|.+++|+.|+++++ .+ ..+...+...|-. ++|
T Consensus 199 ------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~---d~laL~ll~~Pge~GAD 261 (954)
T PRK12566 199 ------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AA---DLLSLLVLTPPGELGAD 261 (954)
T ss_pred ------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-Ee---CHHHHhCCCChhhcCCc
Confidence 344444444 57778888888777 66999999999999998663 32 2233334445544 699
Q ss_pred EEEeCCCc-----ccCCCCCceEEeecCCcchhhHHHHhh----------------------------hccCCCCCCCCc
Q 013217 225 VVTTTTHK-----SLRGPRGGMIFFKKDPVLGVELESAIN----------------------------NAVFPGLQGGPH 271 (447)
Q Consensus 225 i~~~s~~K-----~l~Gp~gG~i~~~~~~~~~~~~~~~i~----------------------------~~~~~~~~g~p~ 271 (447)
|++++.+- .++||..|++.++++ +..++- +-......+ .
T Consensus 262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~------~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNIC--T 333 (954)
T PRK12566 262 VVLGSTQRFGVPMGYGGPHAAYFACRDD------YKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNIC--T 333 (954)
T ss_pred EEeeCCCcCCCCCCCCCCCeeeeeehHH------HHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhh--H
Confidence 99886653 456788899999983 333221 110000011 1
Q ss_pred HHHHHHHHHHHH--HhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCee--EEecCCCCCCCHHHHHHHHhhcC
Q 013217 272 NHTIGGLAVCLK--HAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL--VLVDLRPMGIDGARVEKILDMAS 347 (447)
Q Consensus 272 ~~~~aal~~al~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~L~~~g 347 (447)
...+.|+.+++- .+..+|+++..+++..++.+|++.|.+.|+++... .++ +.+.+ +.+..++.+...+.|
T Consensus 334 ~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~---~fF~~~~v~~---~~~~~~~~~~a~~~~ 407 (954)
T PRK12566 334 AQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR---HFFDTLTLEV---GGAQAAIIESAEAAR 407 (954)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CccceEEEEc---cCCHHHHHHHHHHCC
Confidence 222333333332 23345678889999999999999999999987643 222 23343 113566767667788
Q ss_pred eEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 348 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 348 I~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
|-++.. ..+.+.+++...++ ++|++.+.+++.
T Consensus 408 ~n~r~~---------~~~~~~~s~de~~~----~~~~~~~~~~f~ 439 (954)
T PRK12566 408 INLRIL---------GRGRLGVSLDETCD----EATVARLFDIFL 439 (954)
T ss_pred CeeEEe---------CCCeEEEEeCCCCC----HHHHHHHHHHhc
Confidence 888652 12468888888887 999999999884
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.10 E-value=2e-08 Score=95.86 Aligned_cols=316 Identities=16% Similarity=0.082 Sum_probs=177.1
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCcc------ceeeecCCcHHHHHHHHHHh-------cCCC-----------CEEEE
Q 013217 60 GNEYIDELETLCQKRALAAFNLDENKW------GVNVQPLSGSPANFEVYTAI-------LKPH-----------DRIMG 115 (447)
Q Consensus 60 g~~~~~~le~~~~~~~~~~~g~~~~~~------~~~v~~~sGs~a~~~~~~al-------~~pg-----------d~Vl~ 115 (447)
.++...++|...-+|+.++++++.... +.-|...|.+++++.++.+- ++.+ +-|..
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 456778999999999999999863210 11233356666665555442 1222 22332
Q ss_pred ecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhC-----CcEEEEc-CCCCC-CCCChHH
Q 013217 116 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAG-ASAYP-RDFDYPR 188 (447)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~-----~klii~~-~~~~~-~~~~~~~ 188 (447)
.+- .+|-+ ..+..-..+ ++...++.| .++.++.+.|+++++++. |-+|+.+ ++.++ ...++++
T Consensus 187 ~SD--qahss-----veka~~i~~--VklR~l~td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~e 256 (511)
T KOG0628|consen 187 CSD--QAHSS-----VEKACLIAG--VKLRALPTD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEE 256 (511)
T ss_pred ecC--cccch-----HHHhHhhcc--eeEEEeecc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHH
Confidence 221 11111 112222333 344444466 378899999999998753 4444444 22222 2567999
Q ss_pred HHHHHHHhCCEEEEehhhhcccc-cccc---CCCCCCcccEEEeCCCcccCCCC-CceEEeecCCc------chhhHHH-
Q 013217 189 MRQIADAVGALLMMDMAHISGLV-AASV---VADPFKYCDVVTTTTHKSLRGPR-GGMIFFKKDPV------LGVELES- 256 (447)
Q Consensus 189 i~~ia~~~g~~livD~a~~~g~~-~~~~---~~~~~~~~Di~~~s~~K~l~Gp~-gG~i~~~~~~~------~~~~~~~- 256 (447)
|..+|+++|+|++||+|+ +|.- .... .-..+.++|-+.+..|||+..-- ...++++++.. ..+.+.+
T Consensus 257 lg~Vc~~~glWLHVDAAY-AGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h 335 (511)
T KOG0628|consen 257 LGPVCREEGLWLHVDAAY-AGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKH 335 (511)
T ss_pred hcchhhhcCEEEEeehhh-ccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcc
Confidence 999999999999999995 4422 1111 11334578999999999974332 35566666410 0001110
Q ss_pred -HhhhccCCCCCCCCcHHHHHH--HHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH-CCcEeeeCCCCCeeEEecCCCC
Q 013217 257 -AINNAVFPGLQGGPHNHTIGG--LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPM 332 (447)
Q Consensus 257 -~i~~~~~~~~~g~p~~~~~aa--l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~v~~~~~ 332 (447)
............-|....+-+ ++.-++....+++++++++..+.++.+.+-+.+ .-|++.. ..++.++.++.+
T Consensus 336 ~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~---~~~lgLvcFRlk 412 (511)
T KOG0628|consen 336 AYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVN---KRILGLVCFRLK 412 (511)
T ss_pred hhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec---ccccceeEEeec
Confidence 011100000011222222223 344566666666778888888888877776655 5677764 356677777765
Q ss_pred CCC--HHHHHHHHhh-cCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHH
Q 013217 333 GID--GARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 333 ~~~--~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
+.+ -+.+.+++.. ..|.+....+-+ .-.||+....-.+ +++||++.-+.|.+.....
T Consensus 413 ~~N~~ne~Ll~~in~~g~i~l~~~~l~g------k~vlRf~V~s~~t---~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 413 GDNEINEALLNRLNSSGRIHLVPASLHG------KFVLRFAVCSPLT---NESDIDEAWKIIFEAADEL 472 (511)
T ss_pred CCcHHHHHHHHHHHhcCcEEEEEeeecc------eEEEEEEecCCCC---cHHHHHHHHHHHHHHHHHH
Confidence 533 2345555544 457664322111 1258987543322 3899999988888776654
No 382
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.99 E-value=2.4e-07 Score=86.95 Aligned_cols=180 Identities=20% Similarity=0.279 Sum_probs=110.3
Q ss_pred hHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC----cccEEEeCCCcccC-CCCCceEEeecCCcchhhHHHHhhh
Q 013217 186 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINN 260 (447)
Q Consensus 186 ~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~----~~Di~~~s~~K~l~-Gp~gG~i~~~~~~~~~~~~~~~i~~ 260 (447)
+++..++|+++|.++|.|++| .|+--.| +.+.+. -.||++.+ |.++ |-+-|.+++.+ ++.+-+.+
T Consensus 235 lka~~~~v~k~Ggl~IaDEVq-tGfGRtG-~~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~------EIa~v~~~ 304 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQ-TGFGRTG-HMWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTP------EIADVLNQ 304 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhh-hcccccc-ccccccccCCCccHHHHH--hhccCCCcceeeecCH------HHHHHHHh
Confidence 689999999999999999998 4544444 334443 14777665 9884 44447777777 78877766
Q ss_pred cc--CCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH--CCcEeeeCCCCCeeE----EecCC--
Q 013217 261 AV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLV----LVDLR-- 330 (447)
Q Consensus 261 ~~--~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~----~v~~~-- 330 (447)
.. |..+.|.| +...++++ .++.+.+ ++++++..+-..+|.+.|.+ .+.+++.+-....++ +++-+
T Consensus 305 ~~~~fnTyggnP-~a~avg~a-VL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~ 379 (442)
T KOG1404|consen 305 KSSHFNTYGGNP-VACAVGLA-VLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSE 379 (442)
T ss_pred ccccccccCCCc-hhHHHHHH-HHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCC
Confidence 54 22233333 33223332 4554443 34455566666777777766 345555432222222 23222
Q ss_pred --CC-CCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 331 --PM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 331 --~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
++ .-.+..+.+.+.+.|+.|+++.+-| ..+||.+|..-| .+|++-+++..
T Consensus 380 ~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G-------~vfriaPPlciT----~edi~f~~~~~ 432 (442)
T KOG1404|consen 380 PKPPATAEGAVIGEQCKELGVLVGKGGIHG-------NVFRIAPPLCIT----KEDIDFAVEYF 432 (442)
T ss_pred CCCcchHHHHHHHHHHHHhCeeeecccccc-------eEEEecCCeecc----HHHHHHHHHHH
Confidence 11 1123457788899999997754433 379999887766 89997776655
No 383
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.97 E-value=4e-07 Score=96.80 Aligned_cols=214 Identities=14% Similarity=0.056 Sum_probs=119.9
Q ss_pred HHHHHHhhh-------hCCcEEEEcCC--CCCCC--CC---hHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-
Q 013217 159 DMLEKTAIL-------FRPKLIIAGAS--AYPRD--FD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK- 221 (447)
Q Consensus 159 ~~l~~~~~~-------~~~klii~~~~--~~~~~--~~---~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~- 221 (447)
+.+++.+.. .+..+||+.+. ..++. .| +++++++|++||+++|+|+++ .|+--.|.. . ..++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~-TGfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVF-TGLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecc-cCCCcccchhhHHhcCC
Confidence 456666642 24566777642 22332 22 589999999999999999996 555333311 0 0011
Q ss_pred cccEEEeCCCcccCCC--CCceEEeecCCcchhhHHHHhhh-----ccCCCCCCCCcHHHHHHHHHHHHHhcChhH-HHH
Q 013217 222 YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN-----AVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVY 293 (447)
Q Consensus 222 ~~Di~~~s~~K~l~Gp--~gG~i~~~~~~~~~~~~~~~i~~-----~~~~~~~g~p~~~~~aal~~al~~~~~~~~-~~~ 293 (447)
..|+++++ |.|.|. +-|.+++++ ++.+.+.. ....+.+-+-|....++..++++.+.+++. ...
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~------~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l 717 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATE------EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNL 717 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcH------HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHH
Confidence 26999988 998654 457777777 67776632 112222223355556655567877766543 222
Q ss_pred HHHHHHHHHHHHHHHHH--CCcEeeeCCC-CCeeEEecCCCC----CC---CHHHHHHHHh-hcCeEEccCCCCCCCCCC
Q 013217 294 QNKVVSNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLRPM----GI---DGARVEKILD-MASITLNKNSVPGDKSAL 362 (447)
Q Consensus 294 ~~~~~~~~~~l~~~L~~--~g~~~~~~~~-~~~~~~v~~~~~----~~---~~~~~~~~L~-~~gI~v~~~~~p~~~~~~ 362 (447)
.++..+....+.+.|.+ .....+..-. ...+.-+.+... +. -...+.+.+. ++||.++..
T Consensus 718 ~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~--------- 788 (817)
T PLN02974 718 IPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL--------- 788 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec---------
Confidence 23333333334444421 1122221100 011222333211 11 1245666777 899998631
Q ss_pred CCCeEEEecCccccCCCCHHHHHHHHHHHHHHH
Q 013217 363 VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 363 ~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l 395 (447)
.+.||+-++.+++ +++++++.+.|.+.|
T Consensus 789 -Gnvi~l~pP~~i~----~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 -GNVVYLMCGPTTS----PETCTRLLRKVYRRL 816 (817)
T ss_pred -CCEEEEeCCCCCC----HHHHHHHHHHHHHHh
Confidence 2478998888887 999999999998765
No 384
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.82 E-value=3.3e-07 Score=92.00 Aligned_cols=209 Identities=18% Similarity=0.153 Sum_probs=118.4
Q ss_pred HHHHHHHhhh--hCCcEEEEcCC-CCCCC-----CChHHHHHHHHHhCCEEEEehhhhccccccccC-C-CCCC-cccEE
Q 013217 158 YDMLEKTAIL--FRPKLIIAGAS-AYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV 226 (447)
Q Consensus 158 ~~~l~~~~~~--~~~klii~~~~-~~~~~-----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~-~-~~~~-~~Di~ 226 (447)
++++++.+.. .++.+||+.+- ...+. .-+++|+++|++||+++|+|+++. |+--.+.. . .-++ ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence 4566666653 25677777621 12221 236899999999999999999973 44222210 0 0011 26899
Q ss_pred EeCCCcccCCCCCceEEeecCCcchhhHHHHhhh-----ccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q 013217 227 TTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN-----AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 301 (447)
Q Consensus 227 ~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~-----~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~ 301 (447)
++ .|.+ |.+|++..++ +.+.... ....++.+ .+...+++..++++.+.+++ ..+++.+..
T Consensus 291 ~~--gK~l--~~~a~l~~~~-------i~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g 355 (443)
T PRK08297 291 AF--GKKT--QVCGIMAGRR-------VDEVEDNVFAVSSRINSTWG-GNLVDMVRARRILEVIEEDG---LVENAARQG 355 (443)
T ss_pred Ee--cccc--cccceecchH-------HHHhhhhhccCccccCCCCC-ccHHHHHHHHHHHHHHHhcC---HHHHHHHHH
Confidence 76 4987 3456665432 2221111 11111222 24445555555677665443 455666667
Q ss_pred HHHHHHHHHC--CcEee---eCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCcccc
Q 013217 302 RALASRLVEL--GYKLV---SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 376 (447)
Q Consensus 302 ~~l~~~L~~~--g~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~ 376 (447)
++|.+.|++. .+..+ ..+. ..+..+.+.... ....+.+.|.++||.+.. .. ...+|+.++..++
T Consensus 356 ~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~----~~-----~~~lr~~P~l~~t 424 (443)
T PRK08297 356 EYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLWEEGVLVLP----CG-----ERSIRFRPALTVT 424 (443)
T ss_pred HHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHHHCCEEEec----CC-----CCeEEEECCccCC
Confidence 7777766552 12111 1112 233344553211 234677777889999842 11 2469998887766
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 013217 377 RGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 377 ~g~~~~di~~l~~~i~~~l~~ 397 (447)
++|++++.+++.+++..
T Consensus 425 ----~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 425 ----TEEIDAAIDALRRALPE 441 (443)
T ss_pred ----HHHHHHHHHHHHHHHHh
Confidence 99999999999988863
No 385
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.79 E-value=4.8e-06 Score=78.92 Aligned_cols=247 Identities=19% Similarity=0.165 Sum_probs=133.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhcC---
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 108 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~~--- 108 (447)
..|++.+++...+.. . |....-++ ....++ +.+.+.+..+-...+- ...+.|||+||..++..-.+
T Consensus 73 anpev~ral~~q~~k-~--~hs~~~~~----t~eav~--l~~~l~~~~~~~~~~r--vff~nsGTeAne~ALK~Ark~~~ 141 (433)
T KOG1401|consen 73 ANPEVARALAEQAKK-L--GHSSNGYF----TLEAVE--LEEVLSAVLGKGSAER--VFFCNSGTEANETALKFARKFTG 141 (433)
T ss_pred CCHHHHHHHHHHHhh-h--eeccCccc----cHHHHH--HHHHHHhcccCCCccE--EEEecCCcHHHHHHHHHHHHhhc
Confidence 368888888776543 2 11111111 112222 2245555553222222 23358999999988764321
Q ss_pred ---CCC--EEEEecCCCCcccCCCccccccccccccceeEEEecccC---CCC---CCCCHHHHHHHhhhhC--CcEEEE
Q 013217 109 ---PHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---EST---GLVDYDMLEKTAILFR--PKLIIA 175 (447)
Q Consensus 109 ---pgd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~---~~id~~~l~~~~~~~~--~klii~ 175 (447)
|-+ .++.+.-.|.|+- .+. +...+ ......+.+ |+. ..-|..+++++++.++ ..+||+
T Consensus 142 ~~~~~~~t~~Iaf~nsyHG~t-lga------ls~~~--~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIv 212 (433)
T KOG1401|consen 142 KKHPEKKTKFIAFENSYHGRT-LGA------LSVTG--NSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIV 212 (433)
T ss_pred ccCCccceeEEEEecCcCCcc-hhH------HHhhc--ccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEE
Confidence 223 3777766554431 111 11111 011111111 111 1347899999998865 466777
Q ss_pred cCC-CCCCCCC-----hHHHHHHHHHhCCEEEEehhhhcccccccc--CCCCCC-cccEEEeCCCcccC-CCCCceEEee
Q 013217 176 GAS-AYPRDFD-----YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLR-GPRGGMIFFK 245 (447)
Q Consensus 176 ~~~-~~~~~~~-----~~~i~~ia~~~g~~livD~a~~~g~~~~~~--~~~~~~-~~Di~~~s~~K~l~-Gp~gG~i~~~ 245 (447)
.+- ..++..| +..|+++|+++|+++|.|+++ .|+--.+. ...-+. ..|+.+.. |.|+ |.+-|...++
T Consensus 213 EPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~-tG~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~ 289 (433)
T KOG1401|consen 213 EPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQ-TGLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVR 289 (433)
T ss_pred ecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhh-hCccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeeh
Confidence 632 3344333 468889999999999999997 44332221 001111 24888776 9885 4555888888
Q ss_pred cCCcchhhHHHHhhhccC--CCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 246 KDPVLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~--~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
+ ++.+.+..... .+..-+-|.....+...+++.+.++++ .+++.+..+.|++.|.+
T Consensus 290 ~------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~---~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 290 D------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPET---LKNVSKIGKELRKLLDE 347 (433)
T ss_pred H------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHH---HHHHHHHHHHHHHHHHH
Confidence 8 78887776433 111111233445555567787777665 55566666666666655
No 386
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.66 E-value=9.2e-06 Score=73.73 Aligned_cols=287 Identities=17% Similarity=0.164 Sum_probs=148.2
Q ss_pred eeeecCCcHHHHHHHHHHh--cCCCCEEEEecCCCCcccCCCcccccccccccc-----ceeEEEecccC----------
Q 013217 88 VNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----IYFESMPYRLD---------- 150 (447)
Q Consensus 88 ~~v~~~sGs~a~~~~~~al--~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~---------- 150 (447)
+...+.||++||..+++-. .....-|++.+..|.||++...-...-+.+--+ -++.+.|.+--
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~ 183 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMY 183 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccC
Confidence 3455699999999887644 334455677788888886432100000000000 11122222100
Q ss_pred C--CCCCCCHHHHHHHhhhh--CCc---EEEEc--CCCCCCCCC----hHHHHHHHHHhCCEEEEehhhhccccccccCC
Q 013217 151 E--STGLVDYDMLEKTAILF--RPK---LIIAG--ASAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA 217 (447)
Q Consensus 151 ~--~~~~id~~~l~~~~~~~--~~k---lii~~--~~~~~~~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~ 217 (447)
+ +.+..=-|.+++++.+. +-. +.+.. .|.-+.++| ++++.+..+.+|-..|.|++| .|+--.|.+.
T Consensus 184 ~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQ-vGFGRvG~hy 262 (452)
T KOG1403|consen 184 PDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQ-VGFGRVGSHY 262 (452)
T ss_pred CcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhh-hcccccchhh
Confidence 0 00111234555555431 111 12222 222222333 578888888999999999998 5554444444
Q ss_pred CCCC----cccEEEeCCCccc-CCCCCceEEeecCCcchhhHHHHhhhc---cCCCCCCCCcHHHHHHHHHHHHHhcChh
Q 013217 218 DPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPE 289 (447)
Q Consensus 218 ~~~~----~~Di~~~s~~K~l-~Gp~gG~i~~~~~~~~~~~~~~~i~~~---~~~~~~g~p~~~~~aal~~al~~~~~~~ 289 (447)
|.+. -.||++.. |-+ .|.+.+.+.+.+ ++.+.+... .|..+.|+|- ..|...+.++.+..+.
T Consensus 263 Wafq~y~fiPDIVtmg--KpmGNGhPVa~Vattk------eIA~Af~atgv~YFNTyGGnPV--sCAv~laVm~v~e~E~ 332 (452)
T KOG1403|consen 263 WAFQTYNFIPDIVTMG--KPMGNGHPVAAVATTK------EIAQAFHATGVEYFNTYGGNPV--SCAVGLAVMRVCEDEN 332 (452)
T ss_pred hhhhhhccccchheec--ccCCCCCeeeEEeccH------HHHHHhccccceehhccCCCch--hHHHHHHHHHHHhhhh
Confidence 4443 24787765 766 466668888887 788777642 2333334442 2222223455555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEE-ecCCCC---CC-C---HHHHHHHHhh-cCeEEccCCCCCCCC
Q 013217 290 FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL-VDLRPM---GI-D---GARVEKILDM-ASITLNKNSVPGDKS 360 (447)
Q Consensus 290 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~-v~~~~~---~~-~---~~~~~~~L~~-~gI~v~~~~~p~~~~ 360 (447)
+.+..+++-+....+...++. ..+++++-..-.++| +|+-.. .. + ...+..+|++ ++|.++.. -|
T Consensus 333 Lq~ha~~vG~~L~~lL~~~k~-kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD-GP---- 406 (452)
T KOG1403|consen 333 LQEHAQQVGEKLEVLLRRLKQ-KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD-GP---- 406 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC-CC----
Confidence 444455554444444444443 234444322222222 343221 11 1 2234455654 78998753 12
Q ss_pred CCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHH
Q 013217 361 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 397 (447)
Q Consensus 361 ~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~ 397 (447)
....+.|-+|..-+ +++.++++..++++|..
T Consensus 407 --h~NilKiKPPmCFn----eena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 407 --HRNILKIKPPMCFN----EENADEFVLGLDEILTV 437 (452)
T ss_pred --CCceeecCCCcccC----hhhHHHHHHHHHHHHHH
Confidence 13467777664444 89999999999998874
No 387
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.62 E-value=8.9e-07 Score=81.72 Aligned_cols=319 Identities=18% Similarity=0.209 Sum_probs=180.4
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCC----CccceeeecCCcHHHHH--HHHH
Q 013217 31 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE----NKWGVNVQPLSGSPANF--EVYT 104 (447)
Q Consensus 31 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~----~~~~~~v~~~sGs~a~~--~~~~ 104 (447)
++=+.|++|-.+.....-.-- |.......++.+.+. +=.||... +.-++.+|+.|||.|+. +-+.
T Consensus 70 ~vL~~VrkAE~ql~~~~ldKE------YlpI~Gl~eF~k~sa---kLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl 140 (427)
T KOG1411|consen 70 YVLPSVRKAEQQLASLSLDKE------YLPITGLAEFNKLSA---KLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFL 140 (427)
T ss_pred eeeHHHHHHHHHHhhhcccch------hccccchHHHHHHHH---HHhhcCCchhhhccceeEEEeccCcchhhHHHHHH
Confidence 556888888766554211001 111122334443322 22355431 21225788899986654 3455
Q ss_pred HhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCc-EEEEc-CCCCCC
Q 013217 105 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIAG-ASAYPR 182 (447)
Q Consensus 105 al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~k-lii~~-~~~~~~ 182 (447)
+..-|+..|.+++|+.+.|.. ..+..|..++...| .++.+..+|++-+.+.+.+.... .|++- .-+||+
T Consensus 141 ~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~~~yrY-yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPT 211 (427)
T KOG1411|consen 141 ARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPVKFYRY-YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPT 211 (427)
T ss_pred HhhccccceeecCCcccccCc--------cccccCcceeeeee-ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCC
Confidence 556788999999999887632 23344544444444 45678889999887777662223 34442 234454
Q ss_pred -C----CChHHHHHHHHHhCCEEEEehhhhccccccccCCCC--CC-----ccc-EEEeCCCccc--CCCCCceE--Eee
Q 013217 183 -D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK-----YCD-VVTTTTHKSL--RGPRGGMI--FFK 245 (447)
Q Consensus 183 -~----~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~--~~-----~~D-i~~~s~~K~l--~Gp~gG~i--~~~ 245 (447)
. ..+++|.++.++.+.+-+.|.| +-|+-..++.... +. +-+ +++-|+.|.| .|-|.|.+ +|+
T Consensus 212 GvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~ 290 (427)
T KOG1411|consen 212 GVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCK 290 (427)
T ss_pred CCCccHHHHHHHHHHhhhccccchhhhh-hcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEec
Confidence 3 2468999999999999999998 4665444332211 10 223 5667999986 46676654 444
Q ss_pred cCCcchhhHHHHhh----hccCCCCCCCCcHHH--HHHHHHHHHHhcCh---hHHHHHHHHHHHHHHHHHHHHHCCcEee
Q 013217 246 KDPVLGVELESAIN----NAVFPGLQGGPHNHT--IGGLAVCLKHAQSP---EFKVYQNKVVSNCRALASRLVELGYKLV 316 (447)
Q Consensus 246 ~~~~~~~~~~~~i~----~~~~~~~~g~p~~~~--~aal~~al~~~~~~---~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 316 (447)
+. +...++. ....| ++++|..+. +++....--.+... +.+-..+++...++.|.+.|+..|-..
T Consensus 291 ~a-----d~A~rV~SQlk~liRp-mYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~- 363 (427)
T KOG1411|consen 291 DA-----DEAKRVESQLKILIRP-MYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPG- 363 (427)
T ss_pred CH-----HHHHHHHHHHHHHhcc-cccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCc-
Confidence 43 4444433 22333 344555442 33322111111111 235566777777788888887755321
Q ss_pred eCCC--CCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHH
Q 013217 317 SGGS--DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 394 (447)
Q Consensus 317 ~~~~--~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~ 394 (447)
... -..+..+.+ .+++++++..+-.++.|.... -=|||...+++ ..+.+++++|..+
T Consensus 364 -~W~hI~~QIGMF~f--Tgl~peQv~~l~ke~~iYmT~-------------dGRiS~aG~ss-----~nV~yLa~aih~v 422 (427)
T KOG1411|consen 364 -NWSHITKQIGMFCF--TGLNPEQVDWLTKEYHIYLTK-------------DGRISMAGLSS-----SNVPYLADAIHAV 422 (427)
T ss_pred -cHHHHHHhhheeee--cCCCHHHHHHHHhhheeeecc-------------CceEeeccccc-----cCCcccchhhHhH
Confidence 000 012233333 367889999888999998743 23777665554 6788899888776
Q ss_pred HH
Q 013217 395 VE 396 (447)
Q Consensus 395 l~ 396 (447)
.+
T Consensus 423 tk 424 (427)
T KOG1411|consen 423 TK 424 (427)
T ss_pred hc
Confidence 54
No 388
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.60 E-value=4.8e-06 Score=80.80 Aligned_cols=254 Identities=14% Similarity=0.077 Sum_probs=124.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHhc----
Q 013217 32 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 107 (447)
Q Consensus 32 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al~---- 107 (447)
-.|.+.+++.+.+... ...++.. ...+...+ ..+++.+.++-..+. ....+||++|+..++....
T Consensus 33 ~~p~i~~ai~~~~~~~-~~~~~~~---~~~~~~~~----la~~L~~~~p~~~~~---v~f~~sGseAve~Alkla~~~~~ 101 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKL-NYVSFSG---FTHPEAAE----LAEKLAELFPGGLDR---VFFANSGSEAVEAALKLARQYHN 101 (339)
T ss_dssp T-HHHHHHHHHHHHHC-SSCSTTT---SEEHHHHH----HHHHHHHHSSTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CccccchhHHHHhhhc-ccccccc---eeccchhh----hhhhhhhccccccce---eeeccCchHHHHHHHHHhhcccc
Confidence 4689999988876542 1111111 11121222 235777787332211 2335899999998876544
Q ss_pred ---C-CCCEEEEecCCCCcccCC-----CccccccccccccceeEEEecccCCCC---CCCCHHHHHHHhh---hhCCcE
Q 013217 108 ---K-PHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDEST---GLVDYDMLEKTAI---LFRPKL 172 (447)
Q Consensus 108 ---~-pgd~Vl~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~id~~~l~~~~~---~~~~kl 172 (447)
. ...+|+...-.|.|.-.- +....+............+|++.. .. ..-..+++++.+. ..+..+
T Consensus 102 ~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 102 KRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred cccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 2 346888887665443100 000000000000011122232210 00 0001112333222 224567
Q ss_pred EEEcCCC-CCC----CCC-hHHHHHHHHHhCCEEEEehhhhccccccccCC--CCCC-cccEEEeCCCcccCC-CCCceE
Q 013217 173 IIAGASA-YPR----DFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMI 242 (447)
Q Consensus 173 ii~~~~~-~~~----~~~-~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~--~~~~-~~Di~~~s~~K~l~G-p~gG~i 242 (447)
||+.+-. ..+ ..+ +++|+++|++||+++|+|+++ .|+--.|..- ...+ ..|+++++ |.|.| .+.|.+
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav 257 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQ-TGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAV 257 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETT-TTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEE
T ss_pred EEEeccccccCccccccchhhehcccccccccceeccccc-ccccccCCccceecccccCcccccc--cchhhhhhcccc
Confidence 7776321 112 122 589999999999999999997 4442222110 0001 25999997 99964 344888
Q ss_pred EeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013217 243 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 310 (447)
Q Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (447)
++++ ++.+.+......+++++ ++..+++....++.+.++++ .+++.+...+|.+.|++
T Consensus 258 ~~~~------~i~~~~~~~~~~~T~~g-~p~~~aaa~~~l~~~~~~~~---~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 258 LGSE------EIMEAFQPGSHGSTFGG-NPLSCAAALATLEILEEEDL---LERVRELGERLREGLRE 315 (339)
T ss_dssp EEEH------HHHTTSCTTSSTCTTTT--HHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHH
T ss_pred cccc------hhhcccccccccccccc-chHhhhhhhhHHHhhccHHH---HHHHHHHHHHHHHHHHH
Confidence 8888 67666644332222222 34445555556766655443 44555556666665544
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.49 E-value=3.1e-05 Score=70.81 Aligned_cols=274 Identities=18% Similarity=0.226 Sum_probs=149.3
Q ss_pred eeeecCCcHHHHHHHHHHh--cCCCCEEEEecCCCCcccCCCcccccccccccc-ceeEEEecccCCCCCCCCHHHHHHH
Q 013217 88 VNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-IYFESMPYRLDESTGLVDYDMLEKT 164 (447)
Q Consensus 88 ~~v~~~sGs~a~~~~~~al--~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~id~~~l~~~ 164 (447)
+.||..|||.|+.....-+ .-+...|-+.+|....|-. ...-.| ..+...+|- |.++..+|++-+..-
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~--------if~~aGf~tv~~Y~yW-d~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHA--------IFEKAGFTTVATYPYW-DAENKCVDLEGFLSD 171 (410)
T ss_pred cceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHH--------HHHHcCCceeeeeeee-cCCCceecHHHHHHH
Confidence 5788999998887653322 3345678889888777632 111222 112333331 334557999999888
Q ss_pred hhhhCC-c-EEEEc-CCCCCC-CCC----hHHHHHHHHHhCCEEEEehhhhccccccccCCC--CCC-----cc-cEEEe
Q 013217 165 AILFRP-K-LIIAG-ASAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-----YC-DVVTT 228 (447)
Q Consensus 165 ~~~~~~-k-lii~~-~~~~~~-~~~----~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~--~~~-----~~-Di~~~ 228 (447)
++. .| + ++++. .-+||+ ..| +..|++.-++.+...+.|.| +-|+-.++.... .+. +. =+++-
T Consensus 172 l~~-APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~Q 249 (410)
T KOG1412|consen 172 LES-APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQ 249 (410)
T ss_pred Hhh-CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence 876 55 3 33443 234554 332 56788888888999999998 466554443221 111 11 26778
Q ss_pred CCCccc--CCCCCceEEe--ecCCcchhhHHHHhhhccCCCCCCCCcH--HHHHHHHH---HHHHhcChhHHHHHHHHHH
Q 013217 229 TTHKSL--RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHN--HTIGGLAV---CLKHAQSPEFKVYQNKVVS 299 (447)
Q Consensus 229 s~~K~l--~Gp~gG~i~~--~~~~~~~~~~~~~i~~~~~~~~~g~p~~--~~~aal~~---al~~~~~~~~~~~~~~~~~ 299 (447)
|+.|.| .+.|.|-+.+ ++. .....+...+....- ...+.|.- ..|.+... .+++--....+....|+.+
T Consensus 250 SFaKNfGlYneRvGnltvv~~n~-a~i~~v~SQl~lviR-~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~ 327 (410)
T KOG1412|consen 250 SFAKNFGLYNERVGNLTVVVNNP-AVIAGVKSQLTLVIR-SNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKK 327 (410)
T ss_pred hhhhhcccccccccceEEEecCh-hHHHHHHHHHHHHHh-hccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 999986 4788765433 332 111111111211111 11122221 11211111 1111001123445556666
Q ss_pred HHHHHHHHHHHCCcEeeeCCCCCee----EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccc
Q 013217 300 NCRALASRLVELGYKLVSGGSDNHL----VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 375 (447)
Q Consensus 300 ~~~~l~~~L~~~g~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~ 375 (447)
-+..|++.|..++ ++|+=.|+ .++++ .|+++.++..+.+++.|.+-. .++|.++
T Consensus 328 MR~aLrd~L~aL~----TPGtWDHI~~QiGMFSy--TGLtp~qV~~li~~h~vyLl~-----------~GRInis----- 385 (410)
T KOG1412|consen 328 MRTALRDHLVALK----TPGTWDHITQQIGMFSY--TGLTPAQVDHLIENHKVYLLS-----------DGRINIS----- 385 (410)
T ss_pred HHHHHHHHHHhcC----CCCcHHHHHhhccceee--cCCCHHHHHHHHHhceEEEec-----------CCcEeee-----
Confidence 6777777776643 22322222 23333 478888888888889998732 2345443
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 013217 376 TRGFSEKEFVAIADFIHEGVEIT 398 (447)
Q Consensus 376 ~~g~~~~di~~l~~~i~~~l~~~ 398 (447)
|+....+++++.+|+++++..
T Consensus 386 --GLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 386 --GLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred --ccccccHHHHHHHHHHHHHhh
Confidence 334578999999999988754
No 390
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.15 E-value=8e-05 Score=69.32 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=116.4
Q ss_pred CHHHHHHHhhhhC----C-cEEEEcC------CCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccc-cC---CCCCC
Q 013217 157 DYDMLEKTAILFR----P-KLIIAGA------SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS-VV---ADPFK 221 (447)
Q Consensus 157 d~~~l~~~~~~~~----~-klii~~~------~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~-~~---~~~~~ 221 (447)
-++++|++|...+ | ..||+.. -|+....=+..+.+||++||+.+|+|++|..| -..| +. .+.++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGg-GaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGG-GATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCC-CccCceeeehhcCCC
Confidence 4567788886643 4 3455541 12222223689999999999999999999544 2222 11 11122
Q ss_pred -cccEEEeCCCcccCCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 013217 222 -YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 300 (447)
Q Consensus 222 -~~Di~~~s~~K~l~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~~al~~~~~~~~~~~~~~~~~~ 300 (447)
-.|+++|| |-|- .||+. ..+ +++-.-....|..+.|.|.-..+ +...++++..+ .+.++....
T Consensus 333 ~PpD~vTFS--KK~q--~gGff-h~~------~frpn~pYrifNTWmGdP~k~ll--l~~vv~~I~~~---~Ll~n~~~v 396 (484)
T KOG1405|consen 333 SPPDVVTFS--KKFQ--TGGFF-HDE------EFRPNEPYRIFNTWMGDPSKNLL--LEEVVQEIKRE---DLLNNVAHV 396 (484)
T ss_pred CCccceehh--hhhh--cCccc-cCc------ccCCCchHHHhhhhcCChHHHHH--HHHHHHHHhHH---HHHHHHHHH
Confidence 27999987 6542 23532 222 33322222234445677654443 23345555433 345666666
Q ss_pred HHHHHHHHHHC-----C-cEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCcc
Q 013217 301 CRALASRLVEL-----G-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 374 (447)
Q Consensus 301 ~~~l~~~L~~~-----g-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~ 374 (447)
-+.|.++|.+. | +.-+. |..+ +.-+|+.... -.+.+...++.+|+.+..+ | ...||+-.+..
T Consensus 397 G~~l~~gL~~Lq~~~p~~~~~~R-GrGT-F~a~d~ps~~-~Rdk~i~~~~~nGv~~GGC---g------~~siRfRPsLv 464 (484)
T KOG1405|consen 397 GKALLKGLLELQAKYPGKINNLR-GRGT-FIAWDCPSGS-IRDKLILIARLNGVNLGGC---G------DKSIRFRPSLV 464 (484)
T ss_pred HHHHHHHHHHHHHhCchhhhccc-ccce-EEEEeCCChH-HHHHHHHHHHHcCceeccc---c------cceeeecccee
Confidence 67777777552 2 11111 2223 4456876432 2456777778899988643 1 23578765544
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 013217 375 TTRGFSEKEFVAIADFIHEGVE 396 (447)
Q Consensus 375 ~~~g~~~~di~~l~~~i~~~l~ 396 (447)
-+ +...+.+.+.+++.+.
T Consensus 465 f~----~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 465 FR----KHHADIFLDIFDKILA 482 (484)
T ss_pred eh----hhhHHHHHHHHHHHhc
Confidence 44 7788888888877764
No 391
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.02 E-value=0.00017 Score=65.16 Aligned_cols=332 Identities=16% Similarity=0.192 Sum_probs=174.5
Q ss_pred cCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCc-ccCchhHHHHHHHHHHHHHHHHcCCCCCccceeeecCCcHHHH
Q 013217 21 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 99 (447)
Q Consensus 21 ~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~-~~~g~~~~~~le~~~~~~~~~~~g~~~~~~~~~v~~~sGs~a~ 99 (447)
+.++.-|++--+|..|+..+.+.+.|--.-|..-.. .+.+.++...++ .+...++++++.+...- +...-.+||...
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~-~tes~lreLlniPdn~~-vlf~QGGGt~qF 84 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIIN-DTESLLRELLNIPDNYK-VLFLQGGGTGQF 84 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHH-HHHHHHHHHHcCCCcee-EEEEeCCCcccc
Confidence 467888888889999999888888763222221111 123344444444 44568889999985433 233336666443
Q ss_pred HHHHHHhc--CCC---CEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCC--CCCCHHHHHHHhhhhCCcE
Q 013217 100 FEVYTAIL--KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKL 172 (447)
Q Consensus 100 ~~~~~al~--~pg---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~id~~~l~~~~~~~~~kl 172 (447)
.++...|. +.| |-|++-+...-+. ......|. ...+..+..+-+ -.+|.+.++. ++ +-+.
T Consensus 85 aAv~lNL~glK~g~~AdYiVTGsWS~KA~---------~EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~--~~-da~y 151 (370)
T KOG2790|consen 85 AAVPLNLIGLKHGRCADYVVTGSWSAKAA---------EEAKKYGT-PNIVIPKLKSYTYGKVPDPSTWEL--NP-DASY 151 (370)
T ss_pred cccchhhhccccCCccceEEeccccHHHH---------HHHHhhCC-ceEEeccccccccCcCCChhhccc--CC-CccE
Confidence 44444443 444 5555433211000 00111111 112222222112 2356655542 11 3345
Q ss_pred EEEcCC--CCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC--cccEEEeCCCcccCCCCC-ceEEeecC
Q 013217 173 IIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 247 (447)
Q Consensus 173 ii~~~~--~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~--~~Di~~~s~~K~l~Gp~g-G~i~~~~~ 247 (447)
|..+.. ..+..+|. +- +-.-+|+++++|.+ +.++. .|++ .-+++..+.+|.+ ||-| -+++++++
T Consensus 152 vyyCaNETVHGVEf~~--~P-~~~~~~~vlVaDmS--SnflS-----rpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr~d 220 (370)
T KOG2790|consen 152 VYYCANETVHGVEFDF--IP-VNDPKGAVLVADMS--SNFLS-----RPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRKD 220 (370)
T ss_pred EEEecCceeeceecCC--CC-CCCCCCceEEEecc--cchhc-----CCccchhcceEEecccccc-CccccEEEEEehh
Confidence 665521 11112211 10 12346899999986 33332 2333 3568888999986 6777 77888873
Q ss_pred CcchhhHHHHhhh---ccC--------CCCCCCCcHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHH-CCcE
Q 013217 248 PVLGVELESAINN---AVF--------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVE-LGYK 314 (447)
Q Consensus 248 ~~~~~~~~~~i~~---~~~--------~~~~g~p~~~~~aal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~-~g~~ 314 (447)
+..+... .++ ...+.||....+..+...++.+++.| .....+.-.+.++.+.+.+.+ .||-
T Consensus 221 ------llg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy 294 (370)
T KOG2790|consen 221 ------LLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFY 294 (370)
T ss_pred ------hhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 3322211 111 12245666666666677788777554 466666667788889999987 4764
Q ss_pred eee-CC-CCCee-EEecCCCCCCCHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHH
Q 013217 315 LVS-GG-SDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 391 (447)
Q Consensus 315 ~~~-~~-~~~~~-~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i 391 (447)
... .. ..+.+ +.+.+.+.+++.+.+.+..+++=|.+. |+. .-+|||-|.- +. ++-++.+++++++
T Consensus 295 ~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~LK-----GhR---SVGGiRASlY--NA--isv~~~q~L~~~m 362 (370)
T KOG2790|consen 295 RCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQLK-----GHR---SVGGIRASLY--NA--ISVEEVQKLAAFM 362 (370)
T ss_pred EcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhccc-----ccc---ccccchhhhh--cc--ccHHHHHHHHHHH
Confidence 322 11 12222 123333333444444445444444432 332 2358998753 32 4589999999999
Q ss_pred HHHHH
Q 013217 392 HEGVE 396 (447)
Q Consensus 392 ~~~l~ 396 (447)
++..+
T Consensus 363 ~~F~k 367 (370)
T KOG2790|consen 363 KEFQK 367 (370)
T ss_pred HHHHH
Confidence 87654
No 392
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.99 E-value=0.00011 Score=68.62 Aligned_cols=283 Identities=12% Similarity=0.074 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHHHcCCC-CCccceeeecCCcH-HHHHHHHHHhcCC----C--CEEEEecCCCCcccCCCcccccccc
Q 013217 64 IDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAILKP----H--DRIMGLDLPHGGHLSHGFMTPKRRV 135 (447)
Q Consensus 64 ~~~le~~~~~~~~~~~g~~-~~~~~~~v~~~sGs-~a~~~~~~al~~p----g--d~Vl~~~~~~~~~~~~~~~~~~~~~ 135 (447)
..++|+.++ ++-++.|-- .+.- .|.+++|+ +.+.+++.+|..+ + -+|+...|-|..+.. +..-
T Consensus 45 s~eL~~~Ir-~LH~~VGNAvt~gr--~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~-----qt~~- 115 (363)
T PF04864_consen 45 SPELERQIR-RLHRVVGNAVTDGR--YIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPE-----QTDF- 115 (363)
T ss_dssp -HHHHHHHH-HHHHHH-SB--TTS--EEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHH-----HCCC-
T ss_pred cHHHHHHHH-HHHHHhccccccCc--EEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHH-----HHHh-
Confidence 356775544 566666632 2211 24457887 8888888888422 2 256666665544321 1111
Q ss_pred ccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE-EEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhcccccc
Q 013217 136 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAA 213 (447)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~kli-i~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~ 213 (447)
+....++. .-|...+. +- ......| ++++||||- .. -+. +++.-+..+|.|-|++-...
T Consensus 116 -f~s~~y~w---~Gda~~~~-~~--------~~~~~~IElVTSPNNPDG~l-r~~---V~~g~~~k~I~D~AYYWPhy-- 176 (363)
T PF04864_consen 116 -FDSRLYKW---AGDASNFK-NS--------DNPSPYIELVTSPNNPDGQL-REA---VLNGSSGKVIHDLAYYWPHY-- 176 (363)
T ss_dssp -T-BTTEEE---EEECCCGT-T---------S-CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT--
T ss_pred -ccccCccc---cccHHhhc-cC--------CCCCCeEEEEeCCCCCcccc-cch---hcCCCCcceeeeeeeecccc--
Confidence 11111221 11211121 10 0012333 566889985 21 111 23444566799998653321
Q ss_pred ccCCCCCC-cccEEEeCCCccc--CCCCCceEEeecCCcchhhHHHHhhhccCCCCCCCCcHHHHHHHH---HHHHHhcC
Q 013217 214 SVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA---VCLKHAQS 287 (447)
Q Consensus 214 ~~~~~~~~-~~Di~~~s~~K~l--~Gp~gG~i~~~~~~~~~~~~~~~i~~~~~~~~~g~p~~~~~aal~---~al~~~~~ 287 (447)
.|.+-+ .-|++.||.+|.= +|-|-||-+++++ +..+++...+.....|...-.++-++- +.+.....
T Consensus 177 --TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~-----~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~ 249 (363)
T PF04864_consen 177 --TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE-----EVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGT 249 (363)
T ss_dssp --S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H-----HHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCH
T ss_pred --cccCCCCCCceEEEEEecccCccccccceeeecCH-----HHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccC
Confidence 111111 3489999999952 4666699999986 677766554332233333333322211 11111111
Q ss_pred h----h-HHHHHHHHHHHHHHHHHHHHHC-CcEeee--C----------CCCCeeEEecCCCCCCCHHHHHHHHhhcCeE
Q 013217 288 P----E-FKVYQNKVVSNCRALASRLVEL-GYKLVS--G----------GSDNHLVLVDLRPMGIDGARVEKILDMASIT 349 (447)
Q Consensus 288 ~----~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~----------~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 349 (447)
. . |.--.+.+.++-+.|.+.+... -|.+.. + .+...+.|+.+..++ ..++...|+++||.
T Consensus 250 ~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee--d~DC~~~l~~~~I~ 327 (363)
T PF04864_consen 250 EKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE--DEDCYAVLREAKII 327 (363)
T ss_dssp HTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG--GSSHHHHHHCTTEE
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc--cccHHHHHHhCCcc
Confidence 0 1 2222334445555666666552 233321 0 011235688776432 35788999999999
Q ss_pred EccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 350 LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 350 v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+.+...|. .+.++|+|+ +-+ ++|++.+.+.|..
T Consensus 328 tr~G~~fga----~~ryVRlSm--l~~----~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 328 TRSGVLFGA----DSRYVRLSM--LKR----DDDFDQLLERLSK 361 (363)
T ss_dssp EEEGGGGTS-----TTEEEEES--SS-----HHHHHHHHHHHHC
T ss_pred cCCCCccCC----CCCeEEEec--cCC----HHHHHHHHHHHHh
Confidence 987644332 356899986 344 8999999988764
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.85 E-value=0.0065 Score=61.25 Aligned_cols=273 Identities=15% Similarity=0.134 Sum_probs=149.3
Q ss_pred HHHHHHHcCCCCCccceeeecCCcHHHHHHHHHHh-cCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccC
Q 013217 72 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 150 (447)
Q Consensus 72 ~~~~~~~~g~~~~~~~~~v~~~sGs~a~~~~~~al-~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (447)
+..++++.|++-.. +.+ .--||.|-.++.++. .+++.+.++.+..|+-.++... .+..+.+++++
T Consensus 169 QTmi~dlTGL~~aN--ASL-LDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~------TRa~~~~i~v~----- 234 (1001)
T KOG2040|consen 169 QTMITDLTGLPMAN--ASL-LDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVK------TRAKGFGIKVV----- 234 (1001)
T ss_pred HHhhhhccCCcccc--hhh-hccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhh------ccccccceeEE-----
Confidence 35567788887421 011 145775555555544 5667778887777766554221 11112112211
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCC-cccEEEe
Q 013217 151 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 228 (447)
Q Consensus 151 ~~~~~id~~~l~~~~~~~~~klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~-~~Di~~~ 228 (447)
..|+.+...-. + +...|++..|..-+ ..|+.++.+.+++.|..+++- ..++..-....|-. ++||+++
T Consensus 235 ----~~~~~~~~~s~-~-~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavG 304 (1001)
T KOG2040|consen 235 ----VSDIKEADYSS-K-DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVG 304 (1001)
T ss_pred ----ecCHHHhhccc-c-ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeec
Confidence 12333322111 1 45566776665444 889999999999999887652 22222223334433 6999999
Q ss_pred CCCcc-----cCCCCCceEEeecCCc--------------ch-hhHH-------HHhhhccCCCCCCCCcHH-------H
Q 013217 229 TTHKS-----LRGPRGGMIFFKKDPV--------------LG-VELE-------SAINNAVFPGLQGGPHNH-------T 274 (447)
Q Consensus 229 s~~K~-----l~Gp~gG~i~~~~~~~--------------~~-~~~~-------~~i~~~~~~~~~g~p~~~-------~ 274 (447)
|.+.. .+||..||+.++++.. .+ ..+. +.+++-. .|.|.- .
T Consensus 305 SsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDK-----ATSNICTAQALLAN 379 (1001)
T KOG2040|consen 305 SSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDK-----ATSNICTAQALLAN 379 (1001)
T ss_pred cccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhc-----cchhhhHHHHHHHH
Confidence 99873 2466667777765310 00 0000 0111100 111211 1
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHCCcEeeeCCCCCeeEEecCCCCCCCHHHHHHHHhhcCeEEccCC
Q 013217 275 IGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS 354 (447)
Q Consensus 275 ~aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~ 354 (447)
++|+.+ + +....++++..+++...+-.|...|+..|-+++.. .++-.+.+.-.+ +.+++...-.+.+|-++..
T Consensus 380 maAmya-i-YHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k---~fFDTLkI~~~~-s~~~~l~rA~~~~iNlr~~- 452 (1001)
T KOG2040|consen 380 MAAMYA-I-YHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHK---PFFDTLKIRCGC-SAEEVLDRAAKRQINLRLV- 452 (1001)
T ss_pred HHHHHh-h-hcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhccc---cccceEEEEecC-cHHHHHHHHHhhcCceEEe-
Confidence 222221 1 12345678889999999999999999888776642 222223332212 4566666555666666531
Q ss_pred CCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHH
Q 013217 355 VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 392 (447)
Q Consensus 355 ~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~ 392 (447)
..+-|-+++...++ ++|++.+...+.
T Consensus 453 --------ed~tigvslDETv~----~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 453 --------EDGTIGVSLDETVT----EKDVDDLLWVFN 478 (1001)
T ss_pred --------ecCceEEeeccccc----HHHHHHHHHHHc
Confidence 23356677666666 999999988885
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.62 E-value=0.0028 Score=56.98 Aligned_cols=112 Identities=21% Similarity=0.280 Sum_probs=74.3
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc---CCCC-CC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCC-----CCCCc
Q 013217 153 TGLVDYDMLEKTAILFRPKLIIAG---ASAY-PR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-----DPFKY 222 (447)
Q Consensus 153 ~~~id~~~l~~~~~~~~~klii~~---~~~~-~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~-----~~~~~ 222 (447)
.-.-|++.+++.+++..+..|++- .|.+ |+ +.++++|+.||..|+++-+|..|+ |+-...... -..+.
T Consensus 138 ~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnay--glqsee~i~~iaa~~~~gr 215 (432)
T KOG3843|consen 138 ELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY--GLQSEECIHKIAAAAECGR 215 (432)
T ss_pred HHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc--ccchHHHHHHHHHHhhhcc
Confidence 345799999999988667755543 2332 34 567999999999999999998874 322111100 11224
Q ss_pred ccEEEeCCCcccCCCCCceEEe-ecCCcchhhHHHHhhhccCCCC-CCCCcH
Q 013217 223 CDVVTTTTHKSLRGPRGGMIFF-KKDPVLGVELESAINNAVFPGL-QGGPHN 272 (447)
Q Consensus 223 ~Di~~~s~~K~l~Gp~gG~i~~-~~~~~~~~~~~~~i~~~~~~~~-~g~p~~ 272 (447)
.|.++-|..|.|.-|-||.++. -++ .+++.+.+. +||. ..+|+.
T Consensus 216 ida~vqsldknf~vpvggaiia~fk~-----n~iq~iak~-ypgrasa~ps~ 261 (432)
T KOG3843|consen 216 IDAFVQSLDKNFMVPVGGAIIAAFKD-----NFIQEIAKM-YPGRASASPSL 261 (432)
T ss_pred HHHHHHHhhhcceeecchhHhhHhHH-----HHHHHHHHh-CCCccccCccH
Confidence 7899999999999999976653 232 577777665 5655 344554
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.24 E-value=0.00083 Score=56.88 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHcC----CCCCccceeeecCCcH-HHHHHHHHHhcCCCCEEEEecCCCCc
Q 013217 65 DELETLCQKRALAAFN----LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGG 122 (447)
Q Consensus 65 ~~le~~~~~~~~~~~g----~~~~~~~~~v~~~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~ 122 (447)
.++.+.+.+++.+.+| ++++ +|.+++|+ +++..++.++++|||.|++.+|.|++
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd----~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDAD----MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchh----heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 4566666678888877 3454 45558887 89999999999999999999987653
No 396
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=79.73 E-value=24 Score=35.40 Aligned_cols=92 Identities=18% Similarity=0.183 Sum_probs=54.7
Q ss_pred CCCCHHHHHHHhhhh----CCcEEEEc---CCCCCCCCChHHHHHHHHHhC-CEEEEehhhhccccccccCCCC-CC---
Q 013217 154 GLVDYDMLEKTAILF----RPKLIIAG---ASAYPRDFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVADP-FK--- 221 (447)
Q Consensus 154 ~~id~~~l~~~~~~~----~~klii~~---~~~~~~~~~~~~i~~ia~~~g-~~livD~a~~~g~~~~~~~~~~-~~--- 221 (447)
|++|...+++.+++. |+-+|++. .+-.+....+-+|.++|++++ .|++.-+-..+.++... |+. +.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasGhaiAALt~ae--pnnil~HV~ 349 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASGHAIAALTCAE--PNNILGHVE 349 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeeccchhhheeecC--cccchhHHH
Confidence 589999999998763 34444443 333333445789999999986 88876542222233221 221 11
Q ss_pred -cccEEEeCCCcccCCCCCceEEeecC
Q 013217 222 -YCDVVTTTTHKSLRGPRGGMIFFKKD 247 (447)
Q Consensus 222 -~~Di~~~s~~K~l~Gp~gG~i~~~~~ 247 (447)
..|.++...--||+-|..-++...++
T Consensus 350 eqldSMal~ialWLGiPSaPiV~LHRP 376 (838)
T KOG0630|consen 350 EQLDSMALNIALWLGIPSAPIVLLHRP 376 (838)
T ss_pred HHHhhccchhHHHhCCCCCceEEeecc
Confidence 24666666667776666555555543
No 397
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=73.42 E-value=10 Score=36.99 Aligned_cols=57 Identities=19% Similarity=0.348 Sum_probs=43.5
Q ss_pred CCC-CCHHHHHHHhhh----hCCcEEEE--cCCCCCC----CCChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 153 TGL-VDYDMLEKTAIL----FRPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 153 ~~~-id~~~l~~~~~~----~~~klii~--~~~~~~~----~~~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
+|. .++++++.+++. .+++++++ +.+.||. ..|+..|..+.+.+++++++|..|+.|
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 454 688888876643 24678777 4556663 468999999988899999999999876
No 398
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=72.96 E-value=11 Score=34.54 Aligned_cols=57 Identities=14% Similarity=0.252 Sum_probs=42.3
Q ss_pred CC-CCCHHHHHHHhhh----hCCcEEEEc--CCCCCC----CCChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 153 TG-LVDYDMLEKTAIL----FRPKLIIAG--ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 153 ~~-~id~~~l~~~~~~----~~~klii~~--~~~~~~----~~~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
+| ..++++++.+++. .+++++++. .+.|+. ..|+..|..+.+..++++++|.+|+.|
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 44 7888888776643 246777773 455553 568888888888899999999999866
No 399
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=69.52 E-value=15 Score=29.21 Aligned_cols=42 Identities=10% Similarity=-0.115 Sum_probs=32.3
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC
Q 013217 156 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 197 (447)
Q Consensus 156 id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g 197 (447)
..++++.+.+.+.+|++|.++.+......++.++.+.+++.+
T Consensus 37 ~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 37 VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 667888888877799999998765555566778888887763
No 400
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=68.98 E-value=13 Score=30.25 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=39.5
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCC
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 198 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~ 198 (447)
+|+++.++++ ..++++-+.+.++++.+|.++.-..++...++++.+.+++.|+
T Consensus 27 GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 27 GFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 4677776654 6778888888777999998875555556668888888888764
No 401
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=67.52 E-value=12 Score=36.25 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=41.5
Q ss_pred CCCHHHHHHHhhh----hCCcEEEEcC------CCCCC-CCChHHHHHHHHHhCCEEEEehhhhccc
Q 013217 155 LVDYDMLEKTAIL----FRPKLIIAGA------SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 210 (447)
Q Consensus 155 ~id~~~l~~~~~~----~~~klii~~~------~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~ 210 (447)
..+++++..+++. .+.+++++.. +.|++ ..|+..|..+.+..++++|+|.+|+.|.
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 3488888766543 2567777632 25665 7799999999777899999999998873
No 402
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=66.94 E-value=20 Score=29.62 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=37.9
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 197 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g 197 (447)
+++++.++.+ +.++++.+.+.+++|++|.++.........++++.+.+++.+
T Consensus 31 G~eVi~LG~~-----vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~ 82 (137)
T PRK02261 31 GFEVINLGVM-----TSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG 82 (137)
T ss_pred CCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC
Confidence 4576665543 678899888888899999998666655556777777777663
No 403
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=65.89 E-value=14 Score=28.85 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 154 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 154 ~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
..+++++++.++.+ +|..|+++...++...-.++-.+++++.++-+++-
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 46999999999987 99999998655555433577788999988776653
No 404
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=65.00 E-value=17 Score=29.98 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=39.5
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCC
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 198 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~ 198 (447)
.+|+++.++.+ ..++++-+.+.++++.+|.+++-...+...++++.+.+++.|+
T Consensus 28 ~GfeVi~LG~~-----v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 28 AGFNVVNLGVL-----SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 34677776654 6788888888777999998875444445568888888888764
No 405
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=64.88 E-value=27 Score=27.96 Aligned_cols=50 Identities=12% Similarity=0.013 Sum_probs=38.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehh
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a 205 (447)
.+++++++.++.. +|.+|+++.-.......-.++.+..++.|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 5899999999987 8999999864444433456777788889998887444
No 406
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=64.81 E-value=19 Score=34.25 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=38.6
Q ss_pred CCCCCHHHHHHHhhhh-----CCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhh
Q 013217 153 TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAH 206 (447)
Q Consensus 153 ~~~id~~~l~~~~~~~-----~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~ 206 (447)
+-.++.++++..++.. +-.+|+++.|-.++ ...+.+|.++|++.|+.+++|.+.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 3467777776655432 23567887766665 335799999999999999999763
No 407
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=64.80 E-value=26 Score=30.93 Aligned_cols=71 Identities=20% Similarity=0.128 Sum_probs=50.1
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCCCC-ChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCc
Q 013217 156 VDYDMLEKTAILFRPKLIIAGASAYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 232 (447)
Q Consensus 156 id~~~l~~~~~~~~~klii~~~~~~~~~~-~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K 232 (447)
..++++++++.. ...+|.+..+.-++.. +++++.+-.|..|.+++.|.+..-..... +.. ++||+-++.+=
T Consensus 86 ptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l~a--~~~---G~D~IGTTLsG 157 (229)
T COG3010 86 PTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGLNA--HKL---GFDIIGTTLSG 157 (229)
T ss_pred ccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHHHH--HHc---CCcEEeccccc
Confidence 467888888877 7788888876666655 89999999888899999998742211111 011 47888877553
No 408
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=64.70 E-value=23 Score=30.93 Aligned_cols=72 Identities=17% Similarity=0.145 Sum_probs=47.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCCc
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 232 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~K 232 (447)
...+++++++++. ...+|.+..+.-++..+++++.+-.|+.+.+++.|.+-....... ... ++|++.++.+=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~A--~~~---G~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAINA--AEL---GFDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHHH--HHT---T-SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHHH--HHc---CCCEEEccccc
Confidence 4678999999987 789999998777777889999999999889999998743221111 011 48999887554
No 409
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=61.48 E-value=25 Score=32.60 Aligned_cols=57 Identities=12% Similarity=0.241 Sum_probs=42.0
Q ss_pred CCC-CCHHHHHHHhhhh----CCcEEEEc--CCCC-CC---CCChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 153 TGL-VDYDMLEKTAILF----RPKLIIAG--ASAY-PR---DFDYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 153 ~~~-id~~~l~~~~~~~----~~klii~~--~~~~-~~---~~~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
+|. .++++++.+++.. +.+++++. .+.| |. ..|+..|..+.+.++++++.|..|+.|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 444 4888888776532 35666653 4566 43 678999999998889999999999766
No 410
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=59.10 E-value=17 Score=28.82 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=36.0
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHh--CCEEEEehhh
Q 013217 156 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAH 206 (447)
Q Consensus 156 id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~--g~~livD~a~ 206 (447)
.+.+++.+.+.+.+|++|.++.+..+......++.+..++. ++.+++=+.|
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~ 90 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPH 90 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 45689988888889999998754333344456777776665 7888887765
No 411
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=56.66 E-value=31 Score=30.48 Aligned_cols=61 Identities=15% Similarity=0.146 Sum_probs=46.1
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC----CEEEEehh
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDMA 205 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g----~~livD~a 205 (447)
.+++++.++.+ +.++++.+.+.+.+|++|.++.+..+....++++.+.+++.+ +.+++=+.
T Consensus 111 ~G~~vi~LG~~-----vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 111 NGFDVIDLGRD-----VPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGA 175 (197)
T ss_pred CCcEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEECh
Confidence 35777776543 778999999988899999999777666666888888888874 56666553
No 412
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=55.92 E-value=31 Score=30.57 Aligned_cols=61 Identities=13% Similarity=0.034 Sum_probs=43.6
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC----CEEEEehh
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDMA 205 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g----~~livD~a 205 (447)
.+++++.++. .+.++++.+.+.+.+|++|.++.+..+....++++.+..++.+ +.+++=+.
T Consensus 109 ~G~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 109 NGFEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 3467766543 3678999998888899999998766666566788888777764 45665443
No 413
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=54.24 E-value=29 Score=31.09 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=43.7
Q ss_pred ceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC--CEEEEeh
Q 013217 140 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDM 204 (447)
Q Consensus 140 ~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g--~~livD~ 204 (447)
.+++++.++.+ +.++++.+.+.+.+|++|.++.+.+++...++++.+..++.+ +.+++=+
T Consensus 115 ~G~~Vi~LG~~-----vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG 176 (213)
T cd02069 115 NGYEVIDLGVM-----VPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGG 176 (213)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 44677776654 778999999988899999998766666667777777777764 4554443
No 414
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=53.69 E-value=37 Score=27.23 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=34.2
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHh
Q 013217 142 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV 196 (447)
Q Consensus 142 ~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~ 196 (447)
++++..+. ...++++.+.+.+.+|++|.++.+.......++++.+..++.
T Consensus 28 ~~vi~lG~-----~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 28 FEVIYTGL-----RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 56555432 366778877777779999999866544444567777777776
No 415
>TIGR03586 PseI pseudaminic acid synthase.
Probab=51.75 E-value=44 Score=32.14 Aligned_cols=56 Identities=20% Similarity=0.416 Sum_probs=41.3
Q ss_pred CCCCCHHHHHHHhhhh----CCcEEEE-cCCCCCC---CCChHHHHHHHHHhCCEE-EEehhhhccc
Q 013217 153 TGLVDYDMLEKTAILF----RPKLIIA-GASAYPR---DFDYPRMRQIADAVGALL-MMDMAHISGL 210 (447)
Q Consensus 153 ~~~id~~~l~~~~~~~----~~klii~-~~~~~~~---~~~~~~i~~ia~~~g~~l-ivD~a~~~g~ 210 (447)
+|.-++++++.+++-. +++++++ +.++||. ..++..|..+.+++++++ ++| |..|.
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~ 205 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGI 205 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCch
Confidence 5667888888766432 3466665 4677776 568999999999999999 888 87763
No 416
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=48.67 E-value=62 Score=31.82 Aligned_cols=48 Identities=15% Similarity=0.059 Sum_probs=31.8
Q ss_pred CHHHHHHHhhh--hCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEeh
Q 013217 157 DYDMLEKTAIL--FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 204 (447)
Q Consensus 157 d~~~l~~~~~~--~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~ 204 (447)
+...|.+.+.. .+.++++++-=+-+...+.+.+.++|++.|.++++|-
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEECC
Confidence 34444444433 1457788862122235568999999999999999996
No 417
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=48.43 E-value=1.2e+02 Score=26.69 Aligned_cols=97 Identities=8% Similarity=0.057 Sum_probs=51.6
Q ss_pred CCc-HHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhh--C
Q 013217 93 LSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R 169 (447)
Q Consensus 93 ~sG-s~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~--~ 169 (447)
.|| |+.+.......--.|-+|++..|.....++.+. ..+..|.....+.++ +..++.+.+... +
T Consensus 14 ~SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~-----V~Sr~G~~~~A~~i~--------~~~~i~~~i~~~~~~ 80 (201)
T COG1435 14 FSGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGK-----VSSRIGLSSEAVVIP--------SDTDIFDEIAALHEK 80 (201)
T ss_pred cCcchHHHHHHHHHHHHcCCeEEEEecccccccccce-----eeeccCCcccceecC--------ChHHHHHHHHhcccC
Confidence 345 344443444444567888888776544332221 122334333333322 223444444331 1
Q ss_pred --CcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEE
Q 013217 170 --PKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 202 (447)
Q Consensus 170 --~klii~~~~~~~~~~~~~~i~~ia~~~g~~liv 202 (447)
+..|.+....+-...-+..+.+++++.|++|++
T Consensus 81 ~~~~~v~IDEaQF~~~~~v~~l~~lad~lgi~Vi~ 115 (201)
T COG1435 81 PPVDCVLIDEAQFFDEELVYVLNELADRLGIPVIC 115 (201)
T ss_pred CCcCEEEEehhHhCCHHHHHHHHHHHhhcCCEEEE
Confidence 467888766655433467888888888888886
No 418
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=47.34 E-value=40 Score=31.03 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=33.8
Q ss_pred hhhhCCcEEEEc-----CCCCCC-CCChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 165 AILFRPKLIIAG-----ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 165 ~~~~~~klii~~-----~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
+..-++.+|+|. .-.+++ ..|+..+..+-+.-.+++|+|-+|..|
T Consensus 176 ~s~GN~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVivDpSH~~G 226 (286)
T COG2876 176 LSHGNGNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVIVDPSHATG 226 (286)
T ss_pred HhCCCCcEEEEecccccccccccceechHHHHHHHhhcCCCEEECCCCccc
Confidence 344477887774 122333 779999998888889999999999877
No 419
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=45.07 E-value=46 Score=34.17 Aligned_cols=53 Identities=17% Similarity=0.170 Sum_probs=39.1
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHh--CCEEEEehhhh
Q 013217 154 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHI 207 (447)
Q Consensus 154 ~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~--g~~livD~a~~ 207 (447)
..++.+++.+.+.+++|++|.++.. .+......++++.+++. ++.+++=+.|.
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 4577888888888779999988742 23333456788888877 89999888774
No 420
>KOG4759 consensus Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=44.74 E-value=2.2e+02 Score=26.20 Aligned_cols=52 Identities=17% Similarity=0.201 Sum_probs=33.1
Q ss_pred HHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHH
Q 013217 336 GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 400 (447)
Q Consensus 336 ~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~ 400 (447)
-..+.....+.|.-++++ ..+..||++.|.+|+ |--+.++..+++..+.++.
T Consensus 155 ikai~kAI~~S~lnltP~--------~dg~~l~vsiP~~T~-----E~Re~laK~~~~~~ee~K~ 206 (263)
T KOG4759|consen 155 IKAILKAIEASGLNLTPN--------LDGTVLRVSIPPVTK-----ESREKLAKVLKRYFEEYKQ 206 (263)
T ss_pred HHHHHHHHHhCCCCCCcC--------CCCcEEEecCCCcCh-----HHHHHHHHHHHHHHHHHHH
Confidence 345555666666655432 234579999998885 5567777777766665543
No 421
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=44.36 E-value=63 Score=26.48 Aligned_cols=52 Identities=15% Similarity=0.081 Sum_probs=34.3
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC
Q 013217 141 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 197 (447)
Q Consensus 141 ~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g 197 (447)
+|+++..+. ...++++-+.+.++++.+|.+++........++++.+..++.|
T Consensus 30 GfeVi~lg~-----~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 30 GFDVDVGPL-----FQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 467666443 3567777666666699999888544333444677777777764
No 422
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=43.31 E-value=1.1e+02 Score=24.15 Aligned_cols=49 Identities=20% Similarity=0.196 Sum_probs=37.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehh
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a 205 (447)
.++.++++.++.. +|.+++++.-.+.. .+-.++.+.++++|+-+-+-.+
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~-~~~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQR-FPPPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCC-cCCHHHHHHHHHcCCeEEEECH
Confidence 5899999998876 89999998544433 3357888888889988765544
No 423
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=42.65 E-value=53 Score=30.21 Aligned_cols=55 Identities=9% Similarity=0.179 Sum_probs=35.8
Q ss_pred CCCCCHHHHHHHh----hhhCCcEEEEc-CCC--CCC-CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 153 TGLVDYDMLEKTA----ILFRPKLIIAG-ASA--YPR-DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 153 ~~~id~~~l~~~~----~~~~~klii~~-~~~--~~~-~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
....++++....+ ...+++++++. ... |.+ ..|+..+.-+- +.+.++|+|.+|+.
T Consensus 124 G~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~k-~~~~PVi~DpSHsv 186 (258)
T TIGR01362 124 GQFLSPWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIMR-ELGCPVIFDATHSV 186 (258)
T ss_pred CCcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHHH-hcCCCEEEeCCccc
Confidence 4457777665443 33467887775 222 333 66888777554 45899999999974
No 424
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=42.18 E-value=1.6e+02 Score=23.16 Aligned_cols=50 Identities=20% Similarity=0.143 Sum_probs=36.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehh
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a 205 (447)
.++.+++...+...+|.+|+++.-... ...-+++.+..+++|+-+-+-.+
T Consensus 38 ~l~~~~l~~~~~~~~peiliiGTG~~~-~~~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 38 DLDPEALLPLLAEDRPDILLIGTGAEI-AFLPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred cCCHHHHHHHHhhCCCCEEEEcCCCCC-CcCCHHHHHHHHHcCCeEEEeCc
Confidence 589999998887623999999854444 34457788888899988765444
No 425
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=41.59 E-value=37 Score=31.64 Aligned_cols=54 Identities=15% Similarity=0.237 Sum_probs=38.4
Q ss_pred CCHHHHHHHhhh----hCCcEEEEc-----CCCCCC-CCChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 156 VDYDMLEKTAIL----FRPKLIIAG-----ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 156 id~~~l~~~~~~----~~~klii~~-----~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
.+++++..+++. .++.++++. .++|+. ..|+..|..+.+..+.++++|..|+.|
T Consensus 145 ~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 145 ATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 478887766543 245666653 345664 567888888877789999999999776
No 426
>COG4566 TtrR Response regulator [Signal transduction mechanisms]
Probab=40.94 E-value=91 Score=27.34 Aligned_cols=27 Identities=30% Similarity=0.480 Sum_probs=23.1
Q ss_pred eEEecCCCCCCCHHHHHHHHhhcCeEE
Q 013217 324 LVLVDLRPMGIDGARVEKILDMASITL 350 (447)
Q Consensus 324 ~~~v~~~~~~~~~~~~~~~L~~~gI~v 350 (447)
-+++|++-++++|.++...|.+.|+..
T Consensus 51 clllDvrMPg~sGlelq~~L~~~~~~~ 77 (202)
T COG4566 51 CLLLDVRMPGMSGLELQDRLAERGIRL 77 (202)
T ss_pred eEEEecCCCCCchHHHHHHHHhcCCCC
Confidence 457799999999999999999988654
No 427
>smart00642 Aamy Alpha-amylase domain.
Probab=40.84 E-value=20 Score=30.66 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.0
Q ss_pred CCCCCCChHHHHHHHHHhCCEEEEehh
Q 013217 179 AYPRDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 179 ~~~~~~~~~~i~~ia~~~g~~livD~a 205 (447)
.+++..+++++++-||++|+.++.|.+
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 334567899999999999999999986
No 428
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=40.61 E-value=97 Score=27.97 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=30.7
Q ss_pred CCCHHHHHHHhh----hhCCcEEEEcCCCC---C--CCCC-------hHHHHHHHHHhCCEEEE
Q 013217 155 LVDYDMLEKTAI----LFRPKLIIAGASAY---P--RDFD-------YPRMRQIADAVGALLMM 202 (447)
Q Consensus 155 ~id~~~l~~~~~----~~~~klii~~~~~~---~--~~~~-------~~~i~~ia~~~g~~liv 202 (447)
.+++++|++.+. .+++++|++.+-+. + .... +..|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 467788876554 34789999873211 1 1111 36788889999988776
No 429
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=39.71 E-value=70 Score=29.82 Aligned_cols=57 Identities=14% Similarity=0.199 Sum_probs=36.9
Q ss_pred CCCCCHHHHHHHhh----hhCCcEEEEc-CC--CCCC-CCChHHHHHHHHH-hCCEEEEehhhhcc
Q 013217 153 TGLVDYDMLEKTAI----LFRPKLIIAG-AS--AYPR-DFDYPRMRQIADA-VGALLMMDMAHISG 209 (447)
Q Consensus 153 ~~~id~~~l~~~~~----~~~~klii~~-~~--~~~~-~~~~~~i~~ia~~-~g~~livD~a~~~g 209 (447)
...+.+++....++ ..+++++++. .. .|.+ ..|+..|..+.+. -++++|+|.+|+..
T Consensus 138 Gqf~s~~e~~~aae~i~~~Gn~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHsvq 203 (281)
T PRK12457 138 PQFMSPTQMKHVVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHSLQ 203 (281)
T ss_pred CCcCCHHHHHHHHHHHHHcCCCeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCcccc
Confidence 34567776654433 3367887775 22 3444 6788887765554 39999999999743
No 430
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=36.77 E-value=63 Score=23.98 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=31.3
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
.++..+.++..+.++|++.....+ .-.+.+..+|++++++++.-
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~~c~~~~Vp~~~~ 59 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAEDADP--RLTEKVEALANEKGVPVSKV 59 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECCCCH--HHHHHHHHHHHHcCCCEEEE
Confidence 466777777668889888643222 23678899999999988643
No 431
>PLN02672 methionine S-methyltransferase
Probab=36.66 E-value=6.2e+02 Score=28.92 Aligned_cols=51 Identities=14% Similarity=0.415 Sum_probs=38.5
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCCC--CCChHHHHHHHHHhCCEEEEehhhhcc
Q 013217 159 DMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISG 209 (447)
Q Consensus 159 ~~l~~~~~~~~~klii~~~~~~~~--~~~~~~i~~ia~~~g~~livD~a~~~g 209 (447)
+.+.++++..+|++|+.+.-.+-. .--++.|.+.+++.|++++.|++....
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1082)
T PLN02672 517 DLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLE 569 (1082)
T ss_pred hHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhhee
Confidence 466778888899999887433332 234788899999999999999975443
No 432
>PRK09375 quinolinate synthetase; Provisional
Probab=36.53 E-value=3.9e+02 Score=25.62 Aligned_cols=46 Identities=17% Similarity=0.243 Sum_probs=32.7
Q ss_pred HhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 013217 105 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 179 (447)
Q Consensus 105 al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii~~~~~ 179 (447)
.+++|+.+|+.+++..|+- . ...++.++++++.++ +|.++++...|
T Consensus 84 kIL~p~k~VllP~~~AgC~-------------------------m---Ad~~~~~~i~~lk~~-~p~a~vVaYvN 129 (319)
T PRK09375 84 KILSPEKTVLLPDLEAGCS-------------------------L---ADMCPAEEFRAFKEA-HPDATVVTYVN 129 (319)
T ss_pred HhcCCCCeEECCCCCCCCc-------------------------c---cccCCHHHHHHHHHH-CCCCEEEEEeC
Confidence 5678999999887643321 1 125788999998887 78888887533
No 433
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=35.18 E-value=60 Score=24.79 Aligned_cols=69 Identities=10% Similarity=0.163 Sum_probs=37.3
Q ss_pred cEEEEcCCCCCC-CCChHHHHHHHHHhCCEEEEehhhhccccccccCCCCCCcccEEEeCCC--cccCCCCCceEEee
Q 013217 171 KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFK 245 (447)
Q Consensus 171 klii~~~~~~~~-~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~~~~~~Di~~~s~~--K~l~Gp~gG~i~~~ 245 (447)
|++.+++..-++ ..=-.++-++++++|+..-+|..+ .+.. ..-.+++|+++.|.| ..|.....|.++.-
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~-v~~~-----~~~~~~aDiiv~s~~l~~~~~~~~~~~v~~~ 74 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCA-VDEI-----KALTDGADIIVTSTKLADEFEDIPKGYVVIT 74 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEE-eccc-----ccCCCcccEEEEehHhhhhcCcCCCceEEEE
Confidence 455555433333 222358888999999984444432 2221 222235899999877 44533222555543
No 434
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=34.41 E-value=2.2e+02 Score=24.49 Aligned_cols=65 Identities=15% Similarity=0.128 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhccccccccCCC
Q 013217 154 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 218 (447)
Q Consensus 154 ~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~~~~~~~~ 218 (447)
..+.++.+.+++..-+--+++++.-......-.+++.+++++.+++++.=.-.+-+++..|+.+.
T Consensus 20 ~~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~~~ 84 (171)
T PRK00945 20 KIVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVDAK 84 (171)
T ss_pred cccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCccCC
Confidence 34688888888865333355665322211234788999999999999976543455555555443
No 435
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=33.87 E-value=92 Score=24.61 Aligned_cols=52 Identities=12% Similarity=-0.005 Sum_probs=35.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC--CEEEEehhhh
Q 013217 156 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDMAHI 207 (447)
Q Consensus 156 id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g--~~livD~a~~ 207 (447)
...+++.+.+...+|++|.++.+.......++.+.++.++.+ +.+++=+.+.
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~ 90 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHP 90 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcC
Confidence 456777767766799999998544333345667777777774 7877776553
No 436
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=33.53 E-value=1.3e+02 Score=28.09 Aligned_cols=55 Identities=11% Similarity=0.204 Sum_probs=36.5
Q ss_pred CCCCCCHHHHHHHhhh----hCCcEEEEc-CCC--CCC-CCChHHHHHHHHHhCCEEEEehhhh
Q 013217 152 STGLVDYDMLEKTAIL----FRPKLIIAG-ASA--YPR-DFDYPRMRQIADAVGALLMMDMAHI 207 (447)
Q Consensus 152 ~~~~id~~~l~~~~~~----~~~klii~~-~~~--~~~-~~~~~~i~~ia~~~g~~livD~a~~ 207 (447)
.....++++....++. .+++++++. ... |.+ ..|+..+.-+. +.+.+||+|.+|+
T Consensus 137 kGq~~t~~e~~~aaeki~~~GN~~viLcERG~tFgy~~lv~D~r~ip~mk-~~~lPVI~DpSHs 199 (290)
T PLN03033 137 KGQFCAPSVMRNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMR-EANCPVVADITHS 199 (290)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHHH-hcCCCEEEeCCcc
Confidence 3446788877654432 367777775 222 333 56888776554 6899999999996
No 437
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=33.41 E-value=60 Score=26.37 Aligned_cols=43 Identities=21% Similarity=0.184 Sum_probs=23.5
Q ss_pred CCHHHH----HHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 156 VDYDML----EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 156 id~~~l----~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
+|.++- ++++.. +|-+||++.. ..+.+.+.++|++++++++.=
T Consensus 65 l~~~~r~~~l~~l~~~-~~P~iIvt~~----~~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 65 LDEEERKERLEKLFSY-NPPCIIVTRG----LEPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp S-HHHHCCHHHHHCTT-T-S-EEEETT----T---HHHHHHHHHCT--EEEE
T ss_pred CCHHHHHHHHHHHhCC-CCCEEEEECc----CCCCHHHHHHHHHhCCcEEEc
Confidence 555544 344443 6777777642 246789999999999998853
No 438
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=32.82 E-value=29 Score=35.46 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=25.2
Q ss_pred CCCCCCCChHHHHHHHHHhCCEEEEehh
Q 013217 178 SAYPRDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 178 ~~~~~~~~~~~i~~ia~~~g~~livD~a 205 (447)
|.+++..+++++++.||++|+.||+|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5666777899999999999999999997
No 439
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=32.55 E-value=1e+02 Score=31.24 Aligned_cols=127 Identities=17% Similarity=0.246 Sum_probs=70.1
Q ss_pred HHHHHHHHHCCcEeeeCC-----------CCCeeEEecCCCCCCCHHHHHHHHhhcC----eEEccCCCCCCCC-CCCCC
Q 013217 302 RALASRLVELGYKLVSGG-----------SDNHLVLVDLRPMGIDGARVEKILDMAS----ITLNKNSVPGDKS-ALVPG 365 (447)
Q Consensus 302 ~~l~~~L~~~g~~~~~~~-----------~~~~~~~v~~~~~~~~~~~~~~~L~~~g----I~v~~~~~p~~~~-~~~~~ 365 (447)
..+.+.|...|+.+..-. ....+++.|+..++.++-++.+.+.+.+ |.+ +.++.+ +....
T Consensus 18 ~~l~~~L~~~G~~v~~a~~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~----~Tg~g~i~~AV~ 93 (464)
T COG2204 18 ELLEQALELAGYEVVTAESAEEALEALSESPFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIV----MTGHGDIDTAVE 93 (464)
T ss_pred HHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEE----EeCCCCHHHHHH
Confidence 345555666666655410 1123567788888889999888887754 222 112210 01112
Q ss_pred eEEEecCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-c-cccchhhhcccCCCCccchHHHHHHHHHHHHHHh
Q 013217 366 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV-Q-GSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTT 440 (447)
Q Consensus 366 ~iRig~~~~~~~g~~~~di~~l~~~i~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 440 (447)
.+|.|.-.+-+ ++-+.+++...+.++++......+.. . .+...++...+..+ ..++++++.+..++.
T Consensus 94 A~k~GA~Dfl~---KP~~~~~L~~~v~ral~~~~~~~e~~~~~~~~~~~~~~liG~S-----~am~~l~~~i~kvA~ 162 (464)
T COG2204 94 ALRLGAFDFLE---KPFDLDRLLAIVERALELRELQRENRRSLKRAKSLGGELVGES-----PAMQQLRRLIAKVAP 162 (464)
T ss_pred HHhcCcceeee---CCCCHHHHHHHHHHHHHHhhhhhhhhhhhhccccccCCceecC-----HHHHHHHHHHHHHhC
Confidence 46666444333 35668888999999988754322110 0 00001222333333 479999999988874
No 440
>COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
Probab=32.47 E-value=1.8e+02 Score=26.46 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=36.0
Q ss_pred ccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHH-HhCCEEEEehh
Q 013217 148 RLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIAD-AVGALLMMDMA 205 (447)
Q Consensus 148 ~~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~-~~g~~livD~a 205 (447)
.+||+.-...-+.+++++.. .|.+|+++.|..-+.-.+.++.+-++ +++++++.=-.
T Consensus 21 liDP~k~~~~~ei~~~~~~~-GTDaImIGGS~gvt~~~~~~~v~~ik~~~~lPvilfP~ 78 (240)
T COG1646 21 LIDPDKTEEADEIAEAAAEA-GTDAIMIGGSDGVTEENVDNVVEAIKERTDLPVILFPG 78 (240)
T ss_pred EeCcccccccHHHHHHHHHc-CCCEEEECCcccccHHHHHHHHHHHHhhcCCCEEEecC
Confidence 35654433444555555555 79999998765444334666666666 78998886544
No 441
>PRK14622 hypothetical protein; Provisional
Probab=31.71 E-value=1.1e+02 Score=23.84 Aligned_cols=42 Identities=17% Similarity=0.319 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 013217 381 EKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 447 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 447 (447)
++|.+.+-+.|..+++.+.. ..-+...++...++..+|+|||
T Consensus 60 ~ed~e~LeDLI~aA~N~A~~-------------------------k~~~~~~~~m~~~tgg~~lPG~ 101 (103)
T PRK14622 60 PNDKAMLEDLVTAAVNAAVE-------------------------KARTAADESMSKATGGIKIPGI 101 (103)
T ss_pred cccHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHhCCCCCCCC
Confidence 57888888888777775521 1223455778888889999986
No 442
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=30.76 E-value=39 Score=28.43 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=25.3
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 197 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g 197 (447)
.-|.+.|.+.+..++|.+|.++..+....--.+.+.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 4567888889999999999996432211222456666666653
No 443
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=30.76 E-value=90 Score=23.21 Aligned_cols=44 Identities=5% Similarity=-0.022 Sum_probs=31.1
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEeh
Q 013217 159 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 204 (447)
Q Consensus 159 ~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~ 204 (447)
++..+.++..+.++|++..... ..-.+.|.+.|+.++++++...
T Consensus 14 ~~vlkaIk~gkakLViiA~Da~--~~~~k~i~~~c~~~~Vpv~~~~ 57 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIAKDAE--EHVTKKIKELCEEKSIKIVYID 57 (82)
T ss_pred HHHHHHHHcCCeeEEEEeCCCC--HHHHHHHHHHHHhCCCCEEEeC
Confidence 5566677666889988863222 2236789999999999986544
No 444
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=30.63 E-value=44 Score=24.88 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=18.3
Q ss_pred hHHHHHHHHHhCCEEEEehh
Q 013217 186 YPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 186 ~~~i~~ia~~~g~~livD~a 205 (447)
-++|.++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 47999999999999999986
No 445
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.35 E-value=23 Score=33.27 Aligned_cols=27 Identities=15% Similarity=0.297 Sum_probs=23.0
Q ss_pred CCCCCCChHHHHHHHHHhCCEEEEehh
Q 013217 179 AYPRDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 179 ~~~~~~~~~~i~~ia~~~g~~livD~a 205 (447)
.+++..+++++++.||++|+.||.|.+
T Consensus 47 ~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 47 RFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccchhhhhhhhhhccccccceEEEeee
Confidence 444456899999999999999999987
No 446
>TIGR01768 GGGP-family geranylgeranylglyceryl phosphate synthase family protein. This model represents a family of sequences including geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The clade of bacterial sequences may have the same function or a closely related function. This model supercedes TIGR00265, which has been retired.
Probab=30.29 E-value=1.3e+02 Score=27.23 Aligned_cols=46 Identities=11% Similarity=0.044 Sum_probs=34.9
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEE
Q 013217 156 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 202 (447)
Q Consensus 156 id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~liv 202 (447)
...+.+++++.. .|..|+++.|.+-+...+.++.+..+++.++++.
T Consensus 15 ~~~~~~~~~~~~-gtdai~vGGS~~vt~~~~~~~v~~ik~~~lPvil 60 (223)
T TIGR01768 15 EADEIAKAAAES-GTDAILIGGSQGVTYEKTDTLIEALRRYGLPIIL 60 (223)
T ss_pred ccHHHHHHHHhc-CCCEEEEcCCCcccHHHHHHHHHHHhccCCCEEE
Confidence 455666666655 7999999977655555788888888899888886
No 447
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=30.25 E-value=58 Score=25.39 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=38.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEeh
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 204 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~ 204 (447)
..++.++++++...-..++.+.....++.....++.++|+++|+.++.-.
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecC
Confidence 35778888888875567777775555667788999999999999998776
No 448
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=30.05 E-value=1.9e+02 Score=19.99 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEE
Q 013217 154 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 202 (447)
Q Consensus 154 ~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~liv 202 (447)
+...++++-+.+.+..-+.+.++-.++ .....++.+.++++|+.++.
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~~--~~~~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHGN--LFGAVEFYKAAKKAGIKPII 59 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCCc--ccCHHHHHHHHHHcCCeEEE
Confidence 457788887777766778887774332 34456778888888877653
No 449
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=29.01 E-value=83 Score=28.54 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=27.3
Q ss_pred hCCcEEEEc-CCCCCC---CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 168 FRPKLIIAG-ASAYPR---DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 168 ~~~klii~~-~~~~~~---~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
.+++++++. .++++. ..|+..+. +-++.|+++|.|++|+.
T Consensus 158 gn~~v~lcERG~sFGYnnLV~DMrsl~-iM~~~~~PViFDaTHSv 201 (279)
T COG2877 158 GNNKVILCERGASFGYNNLVVDMRSLP-IMKEFGAPVIFDATHSV 201 (279)
T ss_pred CCCcEEEEeccCccCcchhHHHhhhhH-HHHHcCCCeEEecccce
Confidence 367777775 444442 45666653 55678999999999864
No 450
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=28.69 E-value=1.5e+02 Score=21.21 Aligned_cols=49 Identities=22% Similarity=0.339 Sum_probs=27.4
Q ss_pred CHHHHHHHHhhcCeEEccCCCCCCCCCCCCCeEEEecCccccCCCCHHHHHHHHHHHHH
Q 013217 335 DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 393 (447)
Q Consensus 335 ~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~~~~g~~~~di~~l~~~i~~ 393 (447)
.+-.+++.|.+.||.+.....|..-..--+-.+|+ ..+|.+.+.++|++
T Consensus 13 ~a~~~ek~lk~~gi~~~liP~P~~i~~~CG~al~~----------~~~d~~~i~~~l~~ 61 (73)
T PF11823_consen 13 DAMKAEKLLKKNGIPVRLIPTPREISAGCGLALRF----------EPEDLEKIKEILEE 61 (73)
T ss_pred HHHHHHHHHHHCCCcEEEeCCChhccCCCCEEEEE----------ChhhHHHHHHHHHH
Confidence 34568889999999776533332211100112333 26777777776654
No 451
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=28.14 E-value=1.4e+02 Score=27.95 Aligned_cols=47 Identities=28% Similarity=0.385 Sum_probs=33.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCC----CCC-----------hHHHHHHHHHhCCEEEE
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPR----DFD-----------YPRMRQIADAVGALLMM 202 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~----~~~-----------~~~i~~ia~~~g~~liv 202 (447)
..|++.+++.+.+.+|.+||-+. .|+. ..+ ...|+++|+++|++++-
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~A-Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAA-AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECc-cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 46889999999988999987652 2221 111 25788999999998873
No 452
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=28.06 E-value=1.3e+02 Score=22.66 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=31.9
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHH-HHHHHHHhCCEEEEehh
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPR-MRQIADAVGALLMMDMA 205 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~-i~~ia~~~g~~livD~a 205 (447)
+.++.+.+...+.++|++.....+ ..... +..+|++++++++.=..
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEECC
Confidence 466777777657888888744332 34556 88899999999875443
No 453
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=27.30 E-value=1.1e+02 Score=28.41 Aligned_cols=55 Identities=15% Similarity=0.181 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHhh----hhCCcEEEEc-CCC--CCC-CCChHHHHHHHHHhCCEEEEehhhhc
Q 013217 153 TGLVDYDMLEKTAI----LFRPKLIIAG-ASA--YPR-DFDYPRMRQIADAVGALLMMDMAHIS 208 (447)
Q Consensus 153 ~~~id~~~l~~~~~----~~~~klii~~-~~~--~~~-~~~~~~i~~ia~~~g~~livD~a~~~ 208 (447)
.....+++....++ ..+++++++. ... |.+ ..|+..+.-+ ++.+.++|+|.+|+.
T Consensus 132 G~~~t~~e~~~aaeyi~~~Gn~~vilcERG~tf~y~r~~~D~~~vp~~-k~~~lPVi~DpSHsv 194 (264)
T PRK05198 132 GQFLAPWDMKNVVDKVREAGNDKIILCERGTSFGYNNLVVDMRGLPIM-RETGAPVIFDATHSV 194 (264)
T ss_pred CCcCCHHHHHHHHHHHHHcCCCeEEEEeCCCCcCCCCeeechhhhHHH-hhCCCCEEEeCCccc
Confidence 34577776654443 3367877775 223 333 5688777644 457799999999963
No 454
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=27.16 E-value=85 Score=28.91 Aligned_cols=48 Identities=10% Similarity=0.033 Sum_probs=35.7
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCE
Q 013217 152 STGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGAL 199 (447)
Q Consensus 152 ~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~ 199 (447)
.++.-+++++++++...+...|+++..-+.+..+++++.+.|+++|+.
T Consensus 205 ~GGi~s~~di~~~~~~g~~dgv~~g~a~~~~~~~~~~~~~~~~~~gi~ 252 (254)
T TIGR00735 205 SGGAGKPEHFYEAFTKGKADAALAASVFHYREITIGEVKEYLAERGIP 252 (254)
T ss_pred eCCCCCHHHHHHHHHcCCcceeeEhHHHhCCCCCHHHHHHHHHHCCCc
Confidence 356678888888887634778877755555567899999999888765
No 455
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=27.14 E-value=1.4e+02 Score=21.02 Aligned_cols=52 Identities=17% Similarity=0.217 Sum_probs=30.5
Q ss_pred HHHHHHHhhcCeEEccCCCCCCC-CCCCCCeEEEecCccccCCCCH-HHHHHHHHHHH
Q 013217 337 ARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSE-KEFVAIADFIH 392 (447)
Q Consensus 337 ~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~~~~g~~~-~di~~l~~~i~ 392 (447)
..+.+.|++.|+.+.....|.+. .......+-++.... +++ ++++++.+++.
T Consensus 8 ~a~~~~L~~~g~~v~~~~~~~~~l~~~~~tll~i~~~~~----~~~~~~~~~l~~~v~ 61 (70)
T PF14258_consen 8 YALYQLLEEQGVKVERWRKPYEALEADDGTLLVIGPDLR----LSEPEEAEALLEWVE 61 (70)
T ss_pred HHHHHHHHHCCCeeEEecccHHHhCCCCCEEEEEeCCCC----CCchHHHHHHHHHHH
Confidence 56788888889988754444332 111122455654422 234 88888877764
No 456
>PRK06683 hypothetical protein; Provisional
Probab=27.13 E-value=1.1e+02 Score=22.66 Aligned_cols=44 Identities=7% Similarity=-0.274 Sum_probs=30.5
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEeh
Q 013217 159 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 204 (447)
Q Consensus 159 ~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~ 204 (447)
.+..+.++..+.++|++.....+ .-.+.|.+.|+.++++++.-.
T Consensus 17 ~~v~kaik~gkaklViiA~Da~~--~~~~~i~~~~~~~~Vpv~~~~ 60 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIAEDADM--RLTHVIIRTALQHNIPITKVE 60 (82)
T ss_pred HHHHHHHHcCCeeEEEEECCCCH--HHHHHHHHHHHhcCCCEEEEC
Confidence 55666776668899888632221 136788999999999986443
No 457
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=27.05 E-value=1.5e+02 Score=29.55 Aligned_cols=48 Identities=8% Similarity=0.103 Sum_probs=34.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCC--C-------CCC-CC----ChHHHHHHHHHhCCEEEE
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGAS--A-------YPR-DF----DYPRMRQIADAVGALLMM 202 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~--~-------~~~-~~----~~~~i~~ia~~~g~~liv 202 (447)
..|+|++.+.++..+|+++++++- . -|+ .- --.+|.++|++.|+.++.
T Consensus 154 Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 154 ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 368999999998889999998621 1 112 11 125888899999988764
No 458
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=26.98 E-value=1.2e+02 Score=29.36 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=39.3
Q ss_pred CCCHHHHHHHhhh----hCCcEEEEc--CCCC---CC-CCChHHHHHHHHHhCCEEEEehhhhccc
Q 013217 155 LVDYDMLEKTAIL----FRPKLIIAG--ASAY---PR-DFDYPRMRQIADAVGALLMMDMAHISGL 210 (447)
Q Consensus 155 ~id~~~l~~~~~~----~~~klii~~--~~~~---~~-~~~~~~i~~ia~~~g~~livD~a~~~g~ 210 (447)
..+++++..+++. .+++++++. .+.| +. ..|+..+..+-+..+.++++|..|+.|.
T Consensus 210 ~~ti~E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 210 SATIEEWLMAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 3477877765543 256676663 3344 23 6688899888888899999999998763
No 459
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=26.77 E-value=5.6e+02 Score=24.34 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=54.0
Q ss_pred eecCCcHHHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhC
Q 013217 90 VQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR 169 (447)
Q Consensus 90 v~~~sGs~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~ 169 (447)
|.-.+|.-+.. ++.-|.+-|..|+++- .+.-+... ..+..|-.-.+.++..| .-|.|.+++..+.-
T Consensus 66 VFGAtGFlGry-vvnklak~GSQviiPy--R~d~~~~r------~lkvmGdLGQvl~~~fd----~~DedSIr~vvk~s- 131 (391)
T KOG2865|consen 66 VFGATGFLGRY-VVNKLAKMGSQVIIPY--RGDEYDPR------HLKVMGDLGQVLFMKFD----LRDEDSIRAVVKHS- 131 (391)
T ss_pred EecccccccHH-HHHHHhhcCCeEEEec--cCCccchh------heeecccccceeeeccC----CCCHHHHHHHHHhC-
Confidence 33344443333 5667778899999753 12111111 12333433355565554 36889999988652
Q ss_pred CcEEE-EcCCCCCC-CC---C-----hHHHHHHHHHhCCEEEEehh
Q 013217 170 PKLII-AGASAYPR-DF---D-----YPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 170 ~klii-~~~~~~~~-~~---~-----~~~i~~ia~~~g~~livD~a 205 (447)
.+|| +-.--+.+ .+ | -++|+.||++.|+-=++--+
T Consensus 132 -NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS 176 (391)
T KOG2865|consen 132 -NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVS 176 (391)
T ss_pred -cEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehh
Confidence 2322 21222222 11 2 27999999999876555443
No 460
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=26.23 E-value=1.5e+02 Score=23.18 Aligned_cols=46 Identities=11% Similarity=-0.019 Sum_probs=32.3
Q ss_pred HHHHHhhh-hCCcEEEEcCCCCC---CCCChHHHHHHHHHhCCEEEEehh
Q 013217 160 MLEKTAIL-FRPKLIIAGASAYP---RDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 160 ~l~~~~~~-~~~klii~~~~~~~---~~~~~~~i~~ia~~~g~~livD~a 205 (447)
++.+.+.+ .+..+||...+... ...|-..|+..|-+++++++.+..
T Consensus 58 ~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 58 TVDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred HHHHHHhCCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEECHH
Confidence 34555666 57888776543222 244678999999999999998865
No 461
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=26.12 E-value=1.3e+02 Score=27.69 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=21.7
Q ss_pred CCChHHHHHHHHHhCCEEEEehhh
Q 013217 183 DFDYPRMRQIADAVGALLMMDMAH 206 (447)
Q Consensus 183 ~~~~~~i~~ia~~~g~~livD~a~ 206 (447)
..+.+.+.++.+++++-+++|++|
T Consensus 52 ~l~~e~l~~~l~e~~i~llIDATH 75 (257)
T COG2099 52 FLGAEGLAAFLREEGIDLLIDATH 75 (257)
T ss_pred cCCHHHHHHHHHHcCCCEEEECCC
Confidence 457799999999999999999987
No 462
>PRK04169 geranylgeranylglyceryl phosphate synthase-like protein; Reviewed
Probab=25.79 E-value=1.5e+02 Score=26.92 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=36.8
Q ss_pred cCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 149 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 149 ~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
+||+.. .+-+.+++.+.. .+.+|+++.|..-+...+.++.+.+++++++++.=
T Consensus 14 iDP~k~-~~~~~~~~~~~~-gtdai~vGGS~~vt~~~~~~~v~~ik~~~lPvilf 66 (232)
T PRK04169 14 LDPDKP-LPDEALEAICES-GTDAIIVGGSDGVTEENVDELVKAIKEYDLPVILF 66 (232)
T ss_pred ECCCCC-CCHHHHHHHHhc-CCCEEEEcCCCccchHHHHHHHHHHhcCCCCEEEe
Confidence 666543 444666666655 79999998776444456778888888888888763
No 463
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=25.54 E-value=99 Score=29.26 Aligned_cols=43 Identities=16% Similarity=0.121 Sum_probs=33.9
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCCCCC---hHHHHHHHHHhCCEE
Q 013217 157 DYDMLEKTAILFRPKLIIAGASAYPRDFD---YPRMRQIADAVGALL 200 (447)
Q Consensus 157 d~~~l~~~~~~~~~klii~~~~~~~~~~~---~~~i~~ia~~~g~~l 200 (447)
|++.++++++. -...|-+..|..|...+ -+++.++|+++|+.+
T Consensus 88 ~~~~i~~ai~~-GftSVm~d~S~l~~eEni~~t~~v~~~a~~~gv~v 133 (293)
T PRK07315 88 HYEDALECIEV-GYTSIMFDGSHLPVEENLKLAKEVVEKAHAKGISV 133 (293)
T ss_pred CHHHHHHHHHc-CCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 89999999876 67778888877765322 368888999999988
No 464
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=25.35 E-value=60 Score=29.89 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=20.5
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCCCCChH-----HHHHHHHHhCCEEE
Q 013217 157 DYDMLEKTAILFRPKLIIAGASAYPRDFDYP-----RMRQIADAVGALLM 201 (447)
Q Consensus 157 d~~~l~~~~~~~~~klii~~~~~~~~~~~~~-----~i~~ia~~~g~~li 201 (447)
|.+.+++.+++++.++| ++.+ +|++ -+.+.|++.|++.+
T Consensus 54 ~~~~l~~~l~~~~i~~v-IDAT-----HPfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 54 DEEGLAEFLRENGIDAV-IDAT-----HPFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CHHHHHHHHHhCCCcEE-EECC-----CchHHHHHHHHHHHHhhcCcceE
Confidence 66666666665555543 3332 3663 33445555555544
No 465
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=24.50 E-value=61 Score=34.09 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=26.3
Q ss_pred cCCCCCCCCChHHHHHHHHHhCCEEEEehhh
Q 013217 176 GASAYPRDFDYPRMRQIADAVGALLMMDMAH 206 (447)
Q Consensus 176 ~~~~~~~~~~~~~i~~ia~~~g~~livD~a~ 206 (447)
..+.|++..+++++++-|++.|+-||+|-+.
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 3455666778999999999999999999874
No 466
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=24.27 E-value=1.2e+02 Score=28.48 Aligned_cols=50 Identities=10% Similarity=0.236 Sum_probs=38.2
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCCCCC---hHHHHHHHHHhCCEEEEehhh
Q 013217 156 VDYDMLEKTAILFRPKLIIAGASAYPRDFD---YPRMRQIADAVGALLMMDMAH 206 (447)
Q Consensus 156 id~~~l~~~~~~~~~klii~~~~~~~~~~~---~~~i~~ia~~~g~~livD~a~ 206 (447)
-|++.++++++. ....|-+..++.+.... -+++.++|+++|+.+=.|..|
T Consensus 85 ~~~e~i~~Al~~-G~tsVm~d~s~~~~~eni~~t~~v~~~a~~~gv~veaE~gh 137 (281)
T PRK06806 85 MTFEKIKEALEI-GFTSVMFDGSHLPLEENIQKTKEIVELAKQYGATVEAEIGR 137 (281)
T ss_pred CCHHHHHHHHHc-CCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeee
Confidence 589999999987 67888888777665222 368999999999997656554
No 467
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=24.13 E-value=1.3e+02 Score=26.79 Aligned_cols=54 Identities=11% Similarity=0.074 Sum_probs=32.0
Q ss_pred cCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHH-hCCEEEEe
Q 013217 149 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADA-VGALLMMD 203 (447)
Q Consensus 149 ~~~~~~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~-~g~~livD 203 (447)
+||+.. -+.+.+.+.+.+..+..|+++.|..-+..++.++.+.+++ .+++++.=
T Consensus 5 iDP~k~-e~~~~ia~~v~~~gtDaI~VGGS~gvt~~~~~~~v~~ik~~~~lPvilf 59 (205)
T TIGR01769 5 IDPEKS-DEIEKIAKNAKDAGTDAIMVGGSLGIVESNLDQTVKKIKKITNLPVILF 59 (205)
T ss_pred cCCCcH-HHHHHHHHHHHhcCCCEEEEcCcCCCCHHHHHHHHHHHHhhcCCCEEEE
Confidence 455443 2233333344444689999987643334467777777787 57888863
No 468
>COG0718 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.10 E-value=1.9e+02 Score=22.72 Aligned_cols=41 Identities=20% Similarity=0.300 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 013217 381 EKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 447 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 447 (447)
++|.+.|-+.|..+++.+.. ..-+..+++..++...+| |||
T Consensus 64 peD~E~LeDLi~aA~ndA~~-------------------------kv~e~~~e~m~~~t~gm~-PG~ 104 (105)
T COG0718 64 PEDKEMLEDLILAAFNDAKK-------------------------KVEETRKEKMGALTGGMP-PGF 104 (105)
T ss_pred cccHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHhhccCC-CCC
Confidence 67888888888888775521 122445778888999998 765
No 469
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=23.95 E-value=1.2e+02 Score=27.94 Aligned_cols=50 Identities=12% Similarity=0.010 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 154 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 154 ~~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
...+++++++++.....++|.+..+..++..+..++.++|+++|+.++.-
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVG 237 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEec
Confidence 45688899888877567888887666677778899999999999988864
No 470
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=23.79 E-value=1.4e+02 Score=22.93 Aligned_cols=43 Identities=19% Similarity=0.104 Sum_probs=29.9
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEE
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 202 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~liv 202 (447)
..++.+.++..+.++|++... .| ..-.+.+...|++++++++.
T Consensus 21 ~~~v~kai~~gkaklViiA~D-~~-~~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 21 SKRTIKAIKLGKAKLVIVASN-CP-KDIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHHcCCceEEEEeCC-CC-HHHHHHHHHHHHHcCCCEEE
Confidence 355666776657888888642 22 22357889999999999755
No 471
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=23.71 E-value=2e+02 Score=26.25 Aligned_cols=47 Identities=13% Similarity=0.088 Sum_probs=35.6
Q ss_pred CHHHH-HHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 157 DYDML-EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 157 d~~~l-~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
++++. +..+....+..||++....+...|+++|...++-.+.++++-
T Consensus 164 ~~~~~v~dtver~~aDaVI~tG~~TG~~~d~~el~~a~~~~~~pvlvG 211 (263)
T COG0434 164 SLEEAVKDTVERGLADAVIVTGSRTGSPPDLEELKLAKEAVDTPVLVG 211 (263)
T ss_pred CHHHHHHHHHHccCCCEEEEecccCCCCCCHHHHHHHHhccCCCEEEe
Confidence 44443 344555568999999877777889999999988888888874
No 472
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=23.62 E-value=1.6e+02 Score=25.95 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=26.8
Q ss_pred hCCcEEEEcCCC-CCCCCChHHHHHHHHHhCCEEEE
Q 013217 168 FRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMM 202 (447)
Q Consensus 168 ~~~klii~~~~~-~~~~~~~~~i~~ia~~~g~~liv 202 (447)
.+|..||+.--+ .++....+++.++|++||++++.
T Consensus 155 l~Pa~VicEi~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEIMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEEeCCCccccChHHHHHHHHHcCCcEEE
Confidence 378888886323 34467789999999999999874
No 473
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=23.01 E-value=3.3e+02 Score=23.44 Aligned_cols=98 Identities=9% Similarity=0.031 Sum_probs=51.4
Q ss_pred CCcH-HHHHHHHHHhcCCCCEEEEecCCCCcccCCCccccccccccccceeEEEecccCCCCCCCCHHHHHHHhhhhCCc
Q 013217 93 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 171 (447)
Q Consensus 93 ~sGs-~a~~~~~~al~~pgd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~k 171 (447)
-||= .-+...+..+-..|-+|++..|......+.. ...+..|.......... -++.++...+.. ++.
T Consensus 11 ~sGKS~eLi~~~~~~~~~~~~v~~~kp~~D~R~~~~-----~I~s~~g~~~~~~~~~~------~~~~~~~~~~~~-~~d 78 (176)
T PF00265_consen 11 FSGKSTELIRRIHRYEIAGKKVLVFKPAIDTRYGED-----KIVSHDGISLEAIVDPI------DNLFEIIDILEN-DYD 78 (176)
T ss_dssp TSSHHHHHHHHHHHHHHTT-EEEEEEESTSCCCCSS-----EEEHTTSCEEEEESSEE------SSGGGGGGGCCT-TCS
T ss_pred CChhHHHHHHHHHHHHhCCCeEEEEEecccCcCCCC-----eEEecCCCcccccccch------hhHHHHHHHhcc-CCC
Confidence 4553 3333344444456778887776543221111 11223333233221111 123334444444 488
Q ss_pred EEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 172 LIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 172 lii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
.|++....+-. .++.++.+++...|..|++=
T Consensus 79 vI~IDEaQFf~-~~i~~l~~~~~~~g~~Vi~~ 109 (176)
T PF00265_consen 79 VIGIDEAQFFD-EQIVQLVEILANKGIPVICA 109 (176)
T ss_dssp EEEESSGGGST-TTHHHHHHHHHHTT-EEEEE
T ss_pred EEEEechHhhH-HHHHHHHHHHHhCCCeEEEE
Confidence 99998766654 57888999999999998864
No 474
>PRK00153 hypothetical protein; Validated
Probab=22.68 E-value=1.8e+02 Score=22.63 Aligned_cols=42 Identities=17% Similarity=0.298 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 013217 381 EKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 447 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 447 (447)
++|-+.|.+.|..+++.+.. ..-+...+++..+...+++|+|
T Consensus 62 ~~d~e~LedlI~~A~n~A~~-------------------------~~~~~~~e~m~~~~gg~~~pgl 103 (104)
T PRK00153 62 PEDVEMLEDLILAAFNDALR-------------------------KAEETMKEKMGKLTGGLLPPGF 103 (104)
T ss_pred CcCHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHhCCCCCCCC
Confidence 45777788888777776521 1234567778888888988885
No 475
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=22.63 E-value=2.9e+02 Score=23.95 Aligned_cols=65 Identities=12% Similarity=0.139 Sum_probs=42.8
Q ss_pred hcCeeEecCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCchhHHHHHHHHHHHHHHHHcCCCCC
Q 013217 20 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN 84 (447)
Q Consensus 20 ~~~i~l~~~~n~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~le~~~~~~~~~~~g~~~~ 84 (447)
+..+-+.|.+++.++..++.+...-...+.--.|...+|+..+.++++-+-...++.+.+|.+++
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~g~~~~p~~~~~~~~~i~~~~l~~lg~~~~ 176 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMPAFYTRPKSVEDMIDFIVGRVLDQLGIEND 176 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCCcccCCCCCHHHHHHHHHHHHHHHcCCCcc
Confidence 45677788999999999887766544443323344445666565655555555678888898764
No 476
>KOG2792 consensus Putative cytochrome C oxidase assembly protein [Energy production and conversion]
Probab=22.61 E-value=1.2e+02 Score=28.02 Aligned_cols=16 Identities=13% Similarity=0.245 Sum_probs=10.4
Q ss_pred ChHHHHHHHHHhCCEE
Q 013217 185 DYPRMRQIADAVGALL 200 (447)
Q Consensus 185 ~~~~i~~ia~~~g~~l 200 (447)
..+++.++|+++-+++
T Consensus 211 T~eqvk~vak~yRVYf 226 (280)
T KOG2792|consen 211 TTEQVKQVAKKYRVYF 226 (280)
T ss_pred CHHHHHHHHHHhEEee
Confidence 3567777777776554
No 477
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=22.50 E-value=1.4e+02 Score=30.21 Aligned_cols=46 Identities=17% Similarity=0.282 Sum_probs=32.5
Q ss_pred CHHHHHHHh----hhhCCcEEEEcCCCCCC--CCChHHHHHHH-HHhCCEEEE
Q 013217 157 DYDMLEKTA----ILFRPKLIIAGASAYPR--DFDYPRMRQIA-DAVGALLMM 202 (447)
Q Consensus 157 d~~~l~~~~----~~~~~klii~~~~~~~~--~~~~~~i~~ia-~~~g~~liv 202 (447)
+.++|.+.+ ++++|++|++-++..+. -.|++.+++-+ +++|++++.
T Consensus 81 ~~~~L~~~i~ei~~~~~p~~ifv~~TC~t~iIGdDle~va~~~~~~~gipVV~ 133 (457)
T CHL00073 81 DYEELKRLCLQIKKDRNPSVIVWIGTCTTEIIKMDLEGMAPKLEAEIGIPIVV 133 (457)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEccCcHHhhccCHHHHHHHHHHhhCCCEEE
Confidence 445565544 45689998887666665 45899997655 478999885
No 478
>PRK08185 hypothetical protein; Provisional
Probab=22.47 E-value=1.2e+02 Score=28.43 Aligned_cols=44 Identities=11% Similarity=0.145 Sum_probs=34.4
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCCCCCh---HHHHHHHHHhCCEE
Q 013217 156 VDYDMLEKTAILFRPKLIIAGASAYPRDFDY---PRMRQIADAVGALL 200 (447)
Q Consensus 156 id~~~l~~~~~~~~~klii~~~~~~~~~~~~---~~i~~ia~~~g~~l 200 (447)
-|++.++++++. ....|.+..|..|...++ .++.++|+.+|+.+
T Consensus 79 ~~~e~i~~ai~~-Gf~SVM~D~S~l~~eeNi~~t~~vv~~a~~~gv~v 125 (283)
T PRK08185 79 ATIEDVMRAIRC-GFTSVMIDGSLLPYEENVALTKEVVELAHKVGVSV 125 (283)
T ss_pred CCHHHHHHHHHc-CCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 589999999976 566788888877653333 58888899999988
No 479
>PRK14625 hypothetical protein; Provisional
Probab=22.47 E-value=2.5e+02 Score=22.15 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhcccCCCCccchHHHHHHHHHHHHHHhhCC--CCCC
Q 013217 381 EKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFP--IPGV 447 (447)
Q Consensus 381 ~~di~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p--~~~~ 447 (447)
++|.+.+-+.|..+++.+.. ..-+.-.++...++..+| +|||
T Consensus 61 ~eD~e~LeDLI~aA~NdA~~-------------------------k~~~~~~~~m~~~tgg~~~~lPG~ 104 (109)
T PRK14625 61 PGEGEVIADLIVAAHADAKK-------------------------KLDAKQAQLMQEAAGPMAGLMGGL 104 (109)
T ss_pred CccHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHhcCCCCCCCCC
Confidence 57888888888777775521 122345577788888998 7875
No 480
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=22.34 E-value=1.5e+02 Score=28.00 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=32.6
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhcccc
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLV 211 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~ 211 (447)
++.+++..+. ..|.+++-++.++ ..+-++|.++|+++|+.++==. ..|++
T Consensus 79 ~~~l~e~~~~-gvk~avI~s~Gf~-~~~~~~l~~~a~~~girvlGPN--c~Gi~ 128 (291)
T PRK05678 79 ADAILEAIDA-GIDLIVCITEGIP-VLDMLEVKAYLERKKTRLIGPN--CPGII 128 (291)
T ss_pred HHHHHHHHHC-CCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEECCC--CCccc
Confidence 5666776665 6777655444543 2233489999999999988433 35554
No 481
>PF09651 Cas_APE2256: CRISPR-associated protein (Cas_APE2256); InterPro: IPR013442 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a conserved region of about 150 amino acids found in a family of Cas proteins in at least five archaeal and three bacterial species. In six of eight species, the protein is encoded the vicinity of a CRISPR/Cas locus.; PDB: 3QYF_A.
Probab=22.33 E-value=1.7e+02 Score=24.07 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHHHHh---hcCeeEecCCCCCCHHHHHHHhhhhhcc
Q 013217 4 CNPEVCEIITKEKERQ---FKSLELIASENFTSRAVMEAVGSCLTNK 47 (447)
Q Consensus 4 ~~~~~~~~~~~e~~~~---~~~i~l~~~~n~~~~~v~~a~~~~~~~~ 47 (447)
+..|+..++.--.+.. ++.+-|++|++.....+.+.+..++.++
T Consensus 3 ~sAElnsl~~~~~~~~~~~~~~~~Ll~SDT~~G~~~a~il~~~l~~~ 49 (136)
T PF09651_consen 3 ASAELNSLVRLLEKGKDDDKDEVVLLHSDTPDGRLCAEILKEYLEEK 49 (136)
T ss_dssp G-HHHHHHHHHHHHHT--GGGEEEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHhCccccCcEEEEEeCCCHHHHHHHHHHHHHHHHc
Confidence 4456666655322222 2378999999999888888888888763
No 482
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=22.30 E-value=2.8e+02 Score=22.58 Aligned_cols=51 Identities=14% Similarity=0.209 Sum_probs=31.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCC--CCCC----hHHHHH-HHHHhCCEE-EEehh
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD----YPRMRQ-IADAVGALL-MMDMA 205 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~--~~~~----~~~i~~-ia~~~g~~l-ivD~a 205 (447)
..+++.|.+.++++++..|+++.|-+. ...+ +.++++ +.+++++++ ++|+-
T Consensus 34 ~~~~~~l~~~i~~~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr 92 (130)
T TIGR00250 34 EPDWSRIEELLKEWTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDER 92 (130)
T ss_pred cHHHHHHHHHHHHcCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 467899999999989999999955332 2222 223332 334446554 47775
No 483
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=22.27 E-value=1.9e+02 Score=17.39 Aligned_cols=17 Identities=12% Similarity=0.393 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHhhCC
Q 013217 427 NVADLRGRVEALTTQFP 443 (447)
Q Consensus 427 ~~~~~~~~v~~~~~~~p 443 (447)
..++|.+.+..+|+.+|
T Consensus 23 t~~~I~~~l~~~C~~lP 39 (39)
T PF05184_consen 23 TEEEIKKALEKACNKLP 39 (39)
T ss_dssp HHHHHHHHHHHHHTTSC
T ss_pred cHHHHHHHHHHHHhhCc
Confidence 56789999999999988
No 484
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=22.26 E-value=1.9e+02 Score=22.56 Aligned_cols=44 Identities=11% Similarity=0.131 Sum_probs=30.1
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
.+.+++.++..+.++|++.... ...-.++|...|+.++++++.-
T Consensus 22 ~~~v~~aik~gk~~lVI~A~D~--s~~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKKKKVYLIIISNDI--SENSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHcCCceEEEEeCCC--CHhHHHHHHHHHHHcCCCEEEe
Confidence 4677777877678888886322 1223678888999888886543
No 485
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=22.08 E-value=83 Score=28.98 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=29.2
Q ss_pred CCC-CHHHHHHHhhhhCCcEEEEcCCCCCCCCCh-----HHHHHHHHHhCCEEEE
Q 013217 154 GLV-DYDMLEKTAILFRPKLIIAGASAYPRDFDY-----PRMRQIADAVGALLMM 202 (447)
Q Consensus 154 ~~i-d~~~l~~~~~~~~~klii~~~~~~~~~~~~-----~~i~~ia~~~g~~liv 202 (447)
|.+ |.+.+++.+.+++.++| ++.+ +|+ +-+.+.|++.|++.+-
T Consensus 49 G~l~~~~~l~~~l~~~~i~~V-IDAT-----HPfA~~is~~a~~ac~~~~ipyiR 97 (248)
T PRK08057 49 GGFGGAEGLAAYLREEGIDLV-IDAT-----HPYAAQISANAAAACRALGIPYLR 97 (248)
T ss_pred CCCCCHHHHHHHHHHCCCCEE-EECC-----CccHHHHHHHHHHHHHHhCCcEEE
Confidence 557 88888888887677764 5543 355 3556678887877663
No 486
>PRK07714 hypothetical protein; Provisional
Probab=22.08 E-value=1.9e+02 Score=22.22 Aligned_cols=43 Identities=9% Similarity=0.026 Sum_probs=29.9
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEE
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 202 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~liv 202 (447)
.+.+++.++..+.++|++.....+ .-.+.+...|+.++++++.
T Consensus 23 ~~~v~~al~~g~~~lViiA~D~s~--~~~~ki~~~~~~~~vp~~~ 65 (100)
T PRK07714 23 EELVLKEVRSGKAKLVLLSEDASV--NTTKKITDKCTYYNVPMRK 65 (100)
T ss_pred HHHHHHHHHhCCceEEEEeCCCCH--HHHHHHHHHHHhcCCCEEE
Confidence 467777777667888887632221 2367888899999988763
No 487
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=21.96 E-value=1.7e+02 Score=26.75 Aligned_cols=48 Identities=19% Similarity=0.450 Sum_probs=30.3
Q ss_pred CCCCCHHHHHHHhhhh----CCcEEEE-cCCCCCC---CCChHHHHHHHHHhCCEE
Q 013217 153 TGLVDYDMLEKTAILF----RPKLIIA-GASAYPR---DFDYPRMRQIADAVGALL 200 (447)
Q Consensus 153 ~~~id~~~l~~~~~~~----~~klii~-~~~~~~~---~~~~~~i~~ia~~~g~~l 200 (447)
+|.-++++++++++-. +.+++++ +.+.||. ..++..|..+.+++|+.+
T Consensus 120 TG~stl~EI~~Av~~~~~~~~~~l~llHC~s~YP~~~e~~NL~~i~~L~~~f~~~v 175 (241)
T PF03102_consen 120 TGMSTLEEIERAVEVLREAGNEDLVLLHCVSSYPTPPEDVNLRVIPTLKERFGVPV 175 (241)
T ss_dssp -TT--HHHHHHHHHHHHHHCT--EEEEEE-SSSS--GGG--TTHHHHHHHHSTSEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCEEEEecCCCCCCChHHcChHHHHHHHHhcCCCE
Confidence 5777888888766533 5667666 4788997 567899999999999776
No 488
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=21.93 E-value=2.6e+02 Score=22.12 Aligned_cols=41 Identities=12% Similarity=0.165 Sum_probs=25.4
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehh
Q 013217 159 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 205 (447)
Q Consensus 159 ~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a 205 (447)
+.++++... .++.+++... ..-+++.++|+++|+.++-..+
T Consensus 70 ~~v~~~~~~-g~~~v~~~~g-----~~~~~~~~~a~~~gi~vigp~C 110 (116)
T PF13380_consen 70 EIVDEAAAL-GVKAVWLQPG-----AESEELIEAAREAGIRVIGPNC 110 (116)
T ss_dssp HHHHHHHHH-T-SEEEE-TT-----S--HHHHHHHHHTT-EEEESS-
T ss_pred HHHHHHHHc-CCCEEEEEcc-----hHHHHHHHHHHHcCCEEEeCCc
Confidence 444555444 7888888654 4568999999999999886654
No 489
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=21.83 E-value=1.7e+02 Score=27.68 Aligned_cols=50 Identities=16% Similarity=0.241 Sum_probs=32.7
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhcccc
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLV 211 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~ 211 (447)
++.++++... ..|.+++-++.++-. +-++|.++|+++|+.++==. ..|++
T Consensus 77 ~~~l~e~~~~-Gvk~avIis~Gf~e~-~~~~l~~~a~~~girilGPN--c~Gii 126 (286)
T TIGR01019 77 ADAIFEAIDA-GIELIVCITEGIPVH-DMLKVKRYMEESGTRLIGPN--CPGII 126 (286)
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCHH-HHHHHHHHHHHcCCEEECCC--CceEE
Confidence 4566666655 677665544444322 45799999999999988433 35655
No 490
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=21.65 E-value=1.6e+02 Score=23.19 Aligned_cols=44 Identities=11% Similarity=-0.087 Sum_probs=30.5
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
.++..+++...+.++|++..... ..-.+.+...|+.++++++..
T Consensus 30 ~~~vlkalk~gkaklViiA~D~~--~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 30 TKSTLKALRNGKAKLVIISNNCP--PIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHHcCCeeEEEEeCCCC--HHHHHHHHHHHhhcCCCEEEe
Confidence 35666666655788888863221 223678889999999998754
No 491
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=21.41 E-value=2.2e+02 Score=25.92 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=35.4
Q ss_pred cceeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE-EcCCCCC--CCCChHHHHHHHHHhCCEEEEeh
Q 013217 139 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAYP--RDFDYPRMRQIADAVGALLMMDM 204 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~id~~~l~~~~~~~~~klii-~~~~~~~--~~~~~~~i~~ia~~~g~~livD~ 204 (447)
..+|.+.||-.+ |+---+++.+- -..+|. +++|--+ +..+...|..|+++.++++|+|+
T Consensus 121 ~eGF~VlPY~~~------D~v~akrL~d~-GcaavMPlgsPIGSg~Gi~n~~~l~~i~~~~~vPvIvDA 182 (247)
T PF05690_consen 121 KEGFVVLPYCTD------DPVLAKRLEDA-GCAAVMPLGSPIGSGRGIQNPYNLRIIIERADVPVIVDA 182 (247)
T ss_dssp HTT-EEEEEE-S-------HHHHHHHHHT-T-SEBEEBSSSTTT---SSTHHHHHHHHHHGSSSBEEES
T ss_pred HCCCEEeecCCC------CHHHHHHHHHC-CCCEEEecccccccCcCCCCHHHHHHHHHhcCCcEEEeC
Confidence 345788887543 44444444433 444443 3444333 37788899999999999999997
No 492
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=21.15 E-value=2.3e+02 Score=23.29 Aligned_cols=54 Identities=13% Similarity=0.170 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEcCCCC--CCCCC----hHHHHH-HHHHh-CCEEE-Eehhh
Q 013217 153 TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD----YPRMRQ-IADAV-GALLM-MDMAH 206 (447)
Q Consensus 153 ~~~id~~~l~~~~~~~~~klii~~~~~~--~~~~~----~~~i~~-ia~~~-g~~li-vD~a~ 206 (447)
+...+++.|.++++++++..|+++.|-+ +...+ +.++++ +++++ +++++ +|+-.
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~ 97 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERL 97 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSC
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCCh
Confidence 3468999999999998999999984432 22222 233333 34445 87765 88853
No 493
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=21.08 E-value=2.8e+02 Score=22.79 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=32.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCC--CCCC----hHHHHHHH-HHhCCEE-EEehhh
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD----YPRMRQIA-DAVGALL-MMDMAH 206 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~--~~~~----~~~i~~ia-~~~g~~l-ivD~a~ 206 (447)
..+++.|.+.++++++..|+++.|-+. ...+ +.++++.. ++.++.+ ++|+-.
T Consensus 40 ~~~~~~l~~~i~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~ 99 (138)
T PRK00109 40 TPDWDRLEKLIKEWQPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERL 99 (138)
T ss_pred chHHHHHHHHHHHhCCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCc
Confidence 357899999999989999999955332 2222 23333333 3345554 478753
No 494
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=21.00 E-value=2.8e+02 Score=27.14 Aligned_cols=50 Identities=14% Similarity=0.112 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCC----CCChHHHHHHHHHhCCEEEEeh
Q 013217 154 GLVDYDMLEKTAILFRPKLIIAGASAYPR----DFDYPRMRQIADAVGALLMMDM 204 (447)
Q Consensus 154 ~~id~~~l~~~~~~~~~klii~~~~~~~~----~~~~~~i~~ia~~~g~~livD~ 204 (447)
+.++.++.+++++. ..+.|+++.+.... ..+++.+.++++..++.+++|+
T Consensus 243 gV~~~eda~~a~~~-G~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~~vi~dG 296 (361)
T cd04736 243 GIVTAEDAKRCIEL-GADGVILSNHGGRQLDDAIAPIEALAEIVAATYKPVLIDS 296 (361)
T ss_pred cCCCHHHHHHHHHC-CcCEEEECCCCcCCCcCCccHHHHHHHHHHHhCCeEEEeC
Confidence 34667777666654 66777776433221 2247778888777788888885
No 495
>PRK07283 hypothetical protein; Provisional
Probab=20.75 E-value=1.8e+02 Score=22.28 Aligned_cols=42 Identities=10% Similarity=-0.023 Sum_probs=29.4
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEE
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLM 201 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~li 201 (447)
.+.+++.++..+.++|++..... ..-.+.+.+.|+.++++++
T Consensus 23 ~~~v~~aik~gk~~lVi~A~Das--~~~~kk~~~~~~~~~Vp~~ 64 (98)
T PRK07283 23 EELVVKAIQSGQAKLVFLANDAG--PNLTKKVTDKSNYYQVEVS 64 (98)
T ss_pred HHHHHHHHHcCCccEEEEeCCCC--HHHHHHHHHHHHHcCCCEE
Confidence 46777788766788888863221 2235788889999998876
No 496
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=20.69 E-value=1.4e+02 Score=28.48 Aligned_cols=49 Identities=14% Similarity=-0.104 Sum_probs=34.3
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEe
Q 013217 155 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 203 (447)
Q Consensus 155 ~id~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD 203 (447)
..++++++++++....++|.+..+..++..+..++..+|+++|+.++.-
T Consensus 237 ~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 237 CFSAADAARLAGGGAYDGINIKLMKTGGLTEALRIADLARAAGLKVMVG 285 (316)
T ss_pred CCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4566777776665455667666656666667788888888888877764
No 497
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=20.33 E-value=1.7e+02 Score=25.14 Aligned_cols=46 Identities=13% Similarity=0.182 Sum_probs=32.5
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhC--CEEEEehhh
Q 013217 157 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDMAH 206 (447)
Q Consensus 157 d~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g--~~livD~a~ 206 (447)
|..+++++++. .++.+++=.+ ...+++++.+..++.| +++++|-..
T Consensus 12 ~~~~le~~les-~~~~vflL~~---~i~~ik~ivk~lK~~gK~vfiHvDLv~ 59 (181)
T COG1954 12 DNKDLEKALES-ESQYVFLLTG---HILNIKEIVKKLKNRGKTVFIHVDLVE 59 (181)
T ss_pred hHHHHHHHhcC-CCeEEEEEec---hhhhHHHHHHHHHhCCcEEEEEeHHhc
Confidence 56778888876 6777665322 3568999999999987 455566653
No 498
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=20.33 E-value=2.1e+02 Score=27.21 Aligned_cols=51 Identities=8% Similarity=0.038 Sum_probs=32.2
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCCCCChHHHHHHHHHhCCEEEEehhhhcccc
Q 013217 158 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLV 211 (447)
Q Consensus 158 ~~~l~~~~~~~~~klii~~~~~~~~~~~~~~i~~ia~~~g~~livD~a~~~g~~ 211 (447)
++.++++.+. ..|.+++-++.++-..-.+.+.++|+++|+.++==. ..|++
T Consensus 83 ~~al~e~~~~-Gvk~~vIisaGf~e~g~~~~~~~~ar~~girviGPN--c~Gii 133 (300)
T PLN00125 83 AAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPN--CPGII 133 (300)
T ss_pred HHHHHHHHHc-CCCEEEEECCCCCcccHHHHHHHHHhhcCCEEECCC--Cceee
Confidence 5666776665 778766655555432223566677999999888443 35554
No 499
>PF01904 DUF72: Protein of unknown function DUF72; InterPro: IPR002763 The function of this family is unknown. Aquifex aeolicus has two copies of this protein. A probable aspartyl-tRNA synthetase from Escherichia coli [] belongs to this group.; PDB: 1VPY_A 1ZTV_A 1VPQ_A.
Probab=20.32 E-value=3.7e+02 Score=24.24 Aligned_cols=70 Identities=17% Similarity=0.125 Sum_probs=34.8
Q ss_pred ecCCCCCCCHHHHHHHHhhcCeEEccCCCCC---CCC--C---CCCCeEEE-ecCcc--ccCCCCHHHHHHHHHHHHHHH
Q 013217 327 VDLRPMGIDGARVEKILDMASITLNKNSVPG---DKS--A---LVPGGIRI-GSPAM--TTRGFSEKEFVAIADFIHEGV 395 (447)
Q Consensus 327 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~---~~~--~---~~~~~iRi-g~~~~--~~~g~~~~di~~l~~~i~~~l 395 (447)
+.++...+-..++.+.|+++||..-....|. -.. + ..-.++|+ |.... .....++++++++++.|.+..
T Consensus 122 vE~R~~sW~~~~~~~~l~~~~~~~v~~d~~~~~~~p~~~~~~~~~~~y~RlhG~~~~~~~~~~Ys~~eL~~~a~~i~~~~ 201 (230)
T PF01904_consen 122 VEFRHPSWFTEEVFELLREHGVALVIADSPRLPSLPPPEPQTTPDFAYVRLHGRNGEGWYDYRYSDEELEEWAERIRAWA 201 (230)
T ss_dssp EE--BGGGGCHHHHHHHHHTT-EEEEEE---BTTC------SSTTEEEEEE--S-TTTTTB----HHHHHHHHHHHHHHH
T ss_pred EecCCcchhhHHHHHHHHHcCCEEEEeCCcccCCCCCcccccCCCCeEEeeccCcccccccccCCHHHHHHHHHHHHHHH
Confidence 4444443334778999999998754322222 111 1 02236898 33322 233457899999999888765
Q ss_pred H
Q 013217 396 E 396 (447)
Q Consensus 396 ~ 396 (447)
.
T Consensus 202 ~ 202 (230)
T PF01904_consen 202 A 202 (230)
T ss_dssp T
T ss_pred H
Confidence 4
Done!