BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013218
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P11182|ODB2_HUMAN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Homo
sapiens GN=DBT PE=1 SV=3
Length = 482
Score = 328 bits (842), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/426 (41%), Positives = 257/426 (60%), Gaps = 8/426 (1%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
+V L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 VVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYY 123
Query: 83 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 142
+I VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDIAYVGKPLVD--IETEALKDSEEDVVETPAVSHDEHTHQEIKGRKT----LATPAV 177
Query: 143 RNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEET 202
R LA I L +V +GKDGR+LKED+L Y ++ A P + V ++ T
Sbjct: 178 RRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKVEI-MPPPPKPKDMT 236
Query: 203 YPQTFAEVKWYP-DDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQN 261
P ++ + DKT P++GFQ+ MVKTMS A KIPHF Y +EI+ LVKL+ +
Sbjct: 237 VPILVSKPPVFTGKDKTEPIKGFQKAMVKTMSAALKIPHFGYCDEIDLTELVKLREELKP 296
Query: 262 NNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAV 321
IK +F+P +K+ S+ + ++P +N+ +E + K SHNIGIAM T+ GL V
Sbjct: 297 IAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIV 356
Query: 322 PNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLP 381
PN+KNVQ SI +I EL+RLQ+L +L+ D +GGT TLSNIG+IGG F P++ P
Sbjct: 357 PNVKNVQICSIFDIATELNRLQKLGSVGQLSTTDLTGGTFTLSNIGSIGGTFAKPVIMPP 416
Query: 382 EVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPEL 441
EVAI A+G I+ +PR + G VY + IM V+ ADHRV+DGAT+++F N WK +ENP
Sbjct: 417 EVAIGALGSIKAIPRFNQKGEVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAF 476
Query: 442 LLLQMR 447
+LL ++
Sbjct: 477 MLLDLK 482
>sp|Q23571|ODB2_CAEEL Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial
OS=Caenorhabditis elegans GN=ZK669.4 PE=3 SV=1
Length = 448
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/427 (42%), Positives = 261/427 (61%), Gaps = 10/427 (2%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
+V L+ GEGIAE ++ +W+VKEGD I +F +C VQSDKA + I+ RY G V +L H
Sbjct: 30 VVQFKLSDIGEGIAEVQVKEWYVKEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYH 89
Query: 83 APGNIVKVGETLLKLVV-GDSAVP-TPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATP 140
+ +VG+ L+ + + G+ P P + S ++P + + + G VLATP
Sbjct: 90 EVDGMARVGQALIDVEIEGNVEEPEQPKKEAASSSPEAPKSSAPKAPESAHSEGKVLATP 149
Query: 141 TVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEE 200
VR +A I L +V TGKDGRVLKEDVLK+ Q A S S + R +
Sbjct: 150 AVRRIAIENKIKLAEVRGTGKDGRVLKEDVLKFLGQVPA----DHTSGSTNIRTTHQAPQ 205
Query: 201 ETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQ 260
+ +++ +K +D VP+RG+ R MVKTM+ A KIPHF Y +EIN D+LVK +A +
Sbjct: 206 PS-SKSYEPLK---EDVAVPIRGYTRAMVKTMTEALKIPHFGYNDEINVDSLVKYRAELK 261
Query: 261 NNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLA 320
+ +IK +++P IK+ S+A+ +YP +NS +E+ VI K SHNI +AM T GL
Sbjct: 262 EFAKERHIKLSYMPFFIKAASLALLEYPSLNSTTDEKMENVIHKASHNICLAMDTPGGLV 321
Query: 321 VPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNL 380
VPNIKN + SI EI +EL+RL + K ++ D GT +LSNIG IGG + +P++
Sbjct: 322 VPNIKNCEQRSIFEIAQELNRLLEAGKKQQIKREDLIDGTFSLSNIGNIGGTYASPVVFP 381
Query: 381 PEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPE 440
P+VAI A+G+IEK+PR NV P IM V+ ADHRV+DGAT+A+F N WK +E+P
Sbjct: 382 PQVAIGAIGKIEKLPRFDKHDNVIPVNIMKVSWCADHRVVDGATMARFSNRWKFYLEHPS 441
Query: 441 LLLLQMR 447
+L Q++
Sbjct: 442 AMLAQLK 448
>sp|P53395|ODB2_MOUSE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Mus
musculus GN=Dbt PE=2 SV=2
Length = 482
Score = 326 bits (835), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/427 (42%), Positives = 257/427 (60%), Gaps = 10/427 (2%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
+V L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 VVQFKLSDIGEGIREVTIKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKRLYY 123
Query: 83 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 142
+I VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDIAYVGKPLID--IETEALKDSEEDVVETPAVSHDEHTHQEIKGQKT----LATPAV 177
Query: 143 RNLAKLYGINLYDVDATGKDGRVLKEDVLKY-AVQKGAADGPSTASVSADCREQLLGEEE 201
R LA I L +V +GKDGR+LKED+L + Q GA PS S Q ++
Sbjct: 178 RRLAMENNIKLSEVVGSGKDGRILKEDILSFLEKQTGAILPPSPKSEITPPPPQ--PKDR 235
Query: 202 TYPQTFAEVKWYP-DDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQ 260
T+P A+ + D+T P+ GFQ+ MVKTMS A KIPHF Y +EI+ LVKL+ +
Sbjct: 236 TFPTPIAKPPVFTGKDRTEPVTGFQKAMVKTMSAALKIPHFGYCDEIDLTQLVKLREELK 295
Query: 261 NNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLA 320
IK +F+P +K+ S+ + ++P +N+ +E + K SHNIGIAM T+ GL
Sbjct: 296 PVALARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTELGLI 355
Query: 321 VPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNL 380
VPN+KNVQ S+ EI EL+RLQ+L +L D +GGT TLSNIG+IGG + P++
Sbjct: 356 VPNVKNVQVRSVFEIAMELNRLQKLGSSGQLGTTDLTGGTFTLSNIGSIGGTYAKPVILP 415
Query: 381 PEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPE 440
PEVAI A+G I+ +PR G+VY + IM V+ ADHRV+DGAT+++F N WK +ENP
Sbjct: 416 PEVAIGALGAIKALPRFDQKGDVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPA 475
Query: 441 LLLLQMR 447
+LL ++
Sbjct: 476 FMLLDLK 482
>sp|P11181|ODB2_BOVIN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Bos taurus
GN=DBT PE=1 SV=2
Length = 482
Score = 313 bits (803), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 253/430 (58%), Gaps = 16/430 (3%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
IV L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 IVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYY 123
Query: 83 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 142
+ VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDTAYVGKPLVD--IETEALKDSEEDVVETPAVSHDEHTHQEIKGQKT----LATPAV 177
Query: 143 RNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSA-----DCREQLL 197
R LA I L +V +GKDGR+LKED+L Y ++ A P + +++ +
Sbjct: 178 RRLAMENNIKLSEVIGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIMPPPPKPKDRTI 237
Query: 198 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKA 257
+ P F D+T P++GF + MVKTMS A KIPHF Y +E++ LVKL+
Sbjct: 238 PIPISKPPVFIG-----KDRTEPVKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLRE 292
Query: 258 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
+ IK +F+P +K+ S+ + ++P +N+ +E + K SHNIGIAM T+
Sbjct: 293 ELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQ 352
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VPN+KNVQ SI EI EL+RLQ+L +L+ D GGT TLSNIG+IGG + P+
Sbjct: 353 GLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPV 412
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+ PEVAI A+G I+ +PR ++ G V + IM V+ ADHR++DGATV++F N WK +E
Sbjct: 413 ILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE 472
Query: 438 NPELLLLQMR 447
NP +LL ++
Sbjct: 473 NPAFMLLDLK 482
>sp|P65636|ODP2_STAAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
N315) GN=pdhC PE=1 SV=1
Length = 430
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 234/428 (54%), Gaps = 15/428 (3%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 88 VKVGETLLKLVVGDSA--VPTPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 138
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 139 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 198
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 199 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 257
E P + +P+ T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVSLEGDFPE-TTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 258 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K NIGIA T
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDR 302
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP +K+ SI +I+ E++ L A+D +L + G T T+SNIG+ GG++ P+
Sbjct: 303 GLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPV 362
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K+L+
Sbjct: 363 INHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN 421
Query: 438 NPELLLLQ 445
NPELLL++
Sbjct: 422 NPELLLME 429
>sp|P65635|ODP2_STAAM Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1
Length = 430
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 234/428 (54%), Gaps = 15/428 (3%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 88 VKVGETLLKLVVGDSA--VPTPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 138
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 139 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 198
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 199 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 257
E P + +P+ T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVSLEGDFPE-TTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 258 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K NIGIA T
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDR 302
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP +K+ SI +I+ E++ L A+D +L + G T T+SNIG+ GG++ P+
Sbjct: 303 GLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPV 362
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K+L+
Sbjct: 363 INHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN 421
Query: 438 NPELLLLQ 445
NPELLL++
Sbjct: 422 NPELLLME 429
>sp|Q8CT13|ODP2_STAES Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=pdhC PE=3 SV=1
Length = 433
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 230/432 (53%), Gaps = 20/432 (4%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWF+K GD IEE L VQ+DK+ +EI S G V ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 88 VKVGETLLKLVV-----------GDSAVPTPSSDVLES-VKPPGSENSPDSKLNKDTVGG 135
VG+ ++K+ GD ES V+ S K D
Sbjct: 67 AVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVDESKT 126
Query: 136 VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQ 195
V A P+VR A+ G+N+ V+ +GK+GR+ KED+ Y + +G +T+ S
Sbjct: 127 VKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSVASESTSSD 186
Query: 196 LLGEEETYPQTFAEVKWYPDDKTVPL--RGFQRTMVKTMSMAAKIPHFHYVEEINCDALV 253
++ T Q E + + +P + + MV + A PH ++EI+ L
Sbjct: 187 VVNASAT--QALPEGDFPETTEKIPAMRKAIAKAMVNSKHTA---PHVTLMDEIDVQELW 241
Query: 254 KLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAM 313
+ F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ EV+ K NIGIA
Sbjct: 242 DHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHKHYWNIGIAA 301
Query: 314 ATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKF 373
T GL VP +K+ SI EI+ E++ L A+D +L + G T T+SNIG+ GG++
Sbjct: 302 DTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQW 361
Query: 374 GAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWK 433
P++N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K
Sbjct: 362 FTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIK 420
Query: 434 QLIENPELLLLQ 445
+L+ NPELLL++
Sbjct: 421 RLLNNPELLLME 432
>sp|Q8NX76|ODP2_STAAW Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MW2) GN=pdhC PE=3 SV=1
Length = 430
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 233/428 (54%), Gaps = 15/428 (3%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 88 VKVGETLLKLVVGDSA--VPTPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 138
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 139 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 198
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 199 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 257
E P +P+ T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVTLEGDFPE-TTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 258 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K NIGIA T
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDR 302
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP +K+ SI +I+ E++ L A+D +L + G T T+SNIG+ GG++ P+
Sbjct: 303 GLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPV 362
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K+L+
Sbjct: 363 INHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN 421
Query: 438 NPELLLLQ 445
NPELLL++
Sbjct: 422 NPELLLME 429
>sp|Q6GAB9|ODP2_STAAS Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MSSA476) GN=pdhC PE=3 SV=1
Length = 430
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 233/428 (54%), Gaps = 15/428 (3%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 88 VKVGETLLKLVVGDSA--VPTPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 138
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 139 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 198
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 199 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 257
E P +P+ T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVTLEGDFPE-TTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 258 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K NIGIA T
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDR 302
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP +K+ SI +I+ E++ L A+D +L + G T T+SNIG+ GG++ P+
Sbjct: 303 GLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPV 362
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K+L+
Sbjct: 363 INHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN 421
Query: 438 NPELLLLQ 445
NPELLL++
Sbjct: 422 NPELLLME 429
>sp|Q5HGY9|ODP2_STAAC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
COL) GN=pdhC PE=3 SV=1
Length = 430
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 233/428 (54%), Gaps = 15/428 (3%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 88 VKVGETLLKLVVGDSA--VPTPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 138
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 139 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 198
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE--VA 183
Query: 199 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 257
E P +P+ T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVTLEGDFPE-TTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 258 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K NIGIA T
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDR 302
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP +K+ SI +I+ E++ L A+D +L + G T T+SNIG+ GG++ P+
Sbjct: 303 GLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPV 362
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K+L+
Sbjct: 363 INHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN 421
Query: 438 NPELLLLQ 445
NPELLL++
Sbjct: 422 NPELLLME 429
>sp|Q6GHZ0|ODP2_STAAR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MRSA252) GN=pdhC PE=3 SV=1
Length = 430
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 234/428 (54%), Gaps = 15/428 (3%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 88 VKVGETLLKLVVGDSA--VPTPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 138
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 139 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLG 198
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATNEE--VA 183
Query: 199 EEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKA 257
E P + +P+ T + +R + K M + PH ++EI+ AL +
Sbjct: 184 ETPAAPAAVSLEGDFPE-TTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHRK 242
Query: 258 SFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K NIGIA T
Sbjct: 243 KFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDR 302
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP +K+ SI +I+ E++ L A+D +L + G T T+SNIG+ GG++ P+
Sbjct: 303 GLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPV 362
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K+L+
Sbjct: 363 INHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN 421
Query: 438 NPELLLLQ 445
NPELLL++
Sbjct: 422 NPELLLME 429
>sp|Q59821|ODP2_STAAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus GN=pdhC
PE=3 SV=1
Length = 430
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 236/429 (55%), Gaps = 17/429 (3%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 88 VKVGETLLKLVVGDSA--VPTPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 138
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 139 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSAD-CREQLL 197
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA P+ ++ SAD + +
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGA---PTASNESADSATNEEV 182
Query: 198 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLK 256
E P + +P+ T + +R + K M + PH ++EI+ AL +
Sbjct: 183 AETPAAPAAVSLEGDFPE-TTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDHR 241
Query: 257 ASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQ 316
F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ E++ K NIGIA T
Sbjct: 242 KKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTD 301
Query: 317 HGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAP 376
GL VP +K+ SI +I+ E++ L A+D +L + G T T+SNIG+ GG++ P
Sbjct: 302 RGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTP 361
Query: 377 LLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLI 436
++N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K+L+
Sbjct: 362 VINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLL 420
Query: 437 ENPELLLLQ 445
NPELLL++
Sbjct: 421 NNPELLLME 429
>sp|Q5HQ74|ODP2_STAEQ Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1
Length = 433
Score = 238 bits (608), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 231/432 (53%), Gaps = 20/432 (4%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWF+K GD IEE L VQ+DK+ +EI S G V ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 88 VKVGETLLKLVV-----------GDSAVPTPSSDVLES-VKPPGSENSPDSKLNKDTVGG 135
VG+ ++K+ GD ES V+ S K D
Sbjct: 67 AVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVDESKT 126
Query: 136 VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQ 195
V A P+VR A+ G+N+ V+ +GK+GR+ KED+ Y + +G +T++ S
Sbjct: 127 VKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSAASESTSSD 186
Query: 196 LLGEEETYPQTFAEVKWYPDDKTVPL--RGFQRTMVKTMSMAAKIPHFHYVEEINCDALV 253
++ T Q E + + +P + + MV + A PH ++EI+ L
Sbjct: 187 VVNASAT--QALPEGDFPETTEKIPAMRKAIAKAMVNSKHTA---PHVTLMDEIDVQELW 241
Query: 254 KLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAM 313
+ F+ ++ K TFLP ++K+L A+ KYP +N+ FNEE+ EV+ K NIGIA
Sbjct: 242 DHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHKHYWNIGIAA 301
Query: 314 ATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKF 373
T GL VP +K+ SI EI+ E++ L A+D +L + G T T+SNIG+ GG++
Sbjct: 302 DTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQW 361
Query: 374 GAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWK 433
P++N PEVAI+ +GRI + P + DG + +P++ +++ DHR +DGAT N K
Sbjct: 362 FTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIK 420
Query: 434 QLIENPELLLLQ 445
+L+ NPELLL++
Sbjct: 421 RLLNNPELLLME 432
>sp|P11961|ODP2_GEOSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Geobacillus stearothermophilus
GN=pdhC PE=1 SV=3
Length = 428
Score = 238 bits (607), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 233/451 (51%), Gaps = 63/451 (13%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK GDE+ E LC VQ+DKA +EI S KGKV ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTV 66
Query: 88 VKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSEN--------------------SPDSK 127
VG+TL+ L PG EN S + K
Sbjct: 67 ATVGQTLITL------------------DAPGYENMTFKGQEQEEAKKEEKTETVSKEEK 108
Query: 128 LNKDTVGG------------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAV 175
++ V+A P+VR A+ G+++ V TGK+GRVLKED+ +
Sbjct: 109 VDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 168
Query: 176 QKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA 235
+ +A + E +P+T + + G +R + K M +
Sbjct: 169 GGAKPAPAAAEEKAAPAAAKPATTEGEFPETREK-----------MSGIRRAIAKAMVHS 217
Query: 236 AKI-PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCF 294
PH ++E + LV + F+ ++ IK TFLP ++K+L A+ +YP +N+
Sbjct: 218 KHTAPHVTLMDEADVTKLVAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSI 277
Query: 295 NEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPA 354
++E+ E+I K +NIGIA T GL VP IK+ I + +E++ L + A+D +L P
Sbjct: 278 DDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPG 337
Query: 355 DNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIG 414
+ G + T++NIG+ GG++ P++N PEVAI+ +GRI + P + DG + +P++ +++
Sbjct: 338 EMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKP-IVRDGEIVAAPMLALSLS 396
Query: 415 ADHRVLDGATVAKFCNEWKQLIENPELLLLQ 445
DHR++DGAT K N K+L+ +PELLL++
Sbjct: 397 FDHRMIDGATAQKALNHIKRLLSDPELLLME 427
>sp|P21883|ODP2_BACSU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Bacillus subtilis (strain 168)
GN=pdhC PE=1 SV=2
Length = 442
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 239/447 (53%), Gaps = 41/447 (9%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEGI E E++KWFVK DE++E L VQ+DKA +EI S KGKV +L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELKVEEGTV 66
Query: 88 VKVGETL----------LKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLN---KDTVG 134
VG+T+ L+ D + + ++S G + + + + K T
Sbjct: 67 ATVGQTIITFDAPGYEDLQFKGSDESDDAKTEAQVQSTAEAGQDVAKEEQAQEPAKATGA 126
Query: 135 G------------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY---AVQKGA 179
G V+A P+VR A+ G+++ V +G +GRV+KED+ + Q+ A
Sbjct: 127 GQQDQAEVDPNKRVIAMPSVRKYAREKGVDIRKVTGSGNNGRVVKEDIDSFVNGGAQEAA 186
Query: 180 ADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI- 238
+ +A E +P+T + + G ++ + K M +
Sbjct: 187 PQETAAPQETAAKPAAAPAPEGEFPETREK-----------MSGIRKAIAKAMVNSKHTA 235
Query: 239 PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEES 298
PH ++E++ LV + F+ +D IK T+LP ++K+L+ A+ K+P +N+ ++++
Sbjct: 236 PHVTLMDEVDVTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKT 295
Query: 299 LEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSG 358
EVI K NIGIA T+ GL VP +KN S+ EI+ E++ L A++ +L PA+ G
Sbjct: 296 DEVIQKHYFNIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKAREGKLAPAEMKG 355
Query: 359 GTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHR 418
+ T++NIG+ GG++ P++N PEVAI+ +GRI + + DG + +P++ +++ DHR
Sbjct: 356 ASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAE-KAIVRDGEIVAAPVLALSLSFDHR 414
Query: 419 VLDGATVAKFCNEWKQLIENPELLLLQ 445
++DGAT N K+L+ +P+L+L++
Sbjct: 415 MIDGATAQNALNHIKRLLNDPQLILME 441
>sp|P09062|ODB2_PSEPU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB
PE=3 SV=1
Length = 423
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 223/441 (50%), Gaps = 44/441 (9%)
Query: 26 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 85
+ + GEGIA+ EL++WFVK GD I E Q + V +DKAT+EI S GKV L PG
Sbjct: 6 IKMPDIGEGIAQVELVEWFVKVGDIIAEDQVVADVMTDKATVEIPSPVSGKVLALGGQPG 65
Query: 86 NIVKVGETLLKLVVGDSA--------------------VPTPSSDVLESVKPPGSENSPD 125
++ VG L+++ V S P P DV + + +
Sbjct: 66 EVMAVGSELIRIEVEGSGNHVDVPQAKPAEVPAAPVAAKPEPQKDVKPAAYQASASHEAA 125
Query: 126 SKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPST 185
+ + LA+P VR A GI L V +G GR+L ED+ + + +A G +
Sbjct: 126 PIVPRQPGDKPLASPAVRKRALDAGIELRYVHGSGPAGRILHEDLDAFMSKPQSAAGQT- 184
Query: 186 ASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYV 244
P +A D + VP+ G +R + + M A + + HF YV
Sbjct: 185 ------------------PNGYAR---RTDSEQVPVIGLRRKIAQRMQDAKRRVAHFSYV 223
Query: 245 EEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 304
EEI+ AL L+ + + D K T LP L+++L +A+ +P +N+ +++E+ +
Sbjct: 224 EEIDVTALEALRQQLNSKHGDSRGKLTLLPFLVRALVVALRDFPQINATYDDEAQIITRH 283
Query: 305 GSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLS 364
G+ ++GIA +GL VP +++ ++ S+ E+SRL A++N+ + + SG TITL+
Sbjct: 284 GAVHVGIATQGDNGLMVPVLRHAEAGSLWANAGEISRLANAARNNKASREELSGSTITLT 343
Query: 365 NIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGAT 424
++GA+GG P++N PEVAI+ + R+ + P + DG + +M ++ DHRV+DG
Sbjct: 344 SLGALGGIVSTPVVNTPEVAIVGVNRMVERP-VVIDGQIVVRKMMNLSSSFDHRVVDGMD 402
Query: 425 VAKFCNEWKQLIENPELLLLQ 445
A F + L+E P L ++
Sbjct: 403 AALFIQAVRGLLEQPACLFVE 423
>sp|Q9I1M0|ODB2_PSEAE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=bkdB PE=1 SV=1
Length = 428
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 218/452 (48%), Gaps = 61/452 (13%)
Query: 26 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 85
+ + GEGIAE EL++W V+ GD + E Q L V +DKAT+EI S G++ L PG
Sbjct: 6 IKMPDIGEGIAEVELVEWHVQVGDSVNEDQVLAEVMTDKATVEIPSPVAGRILALGGQPG 65
Query: 86 NIVKVGETLLKLVVGDSAVPTPSSDV-------------------------------LES 114
++ VG L++L V + S L
Sbjct: 66 QVMAVGGELIRLEVEGAGNLAESPAAATPAAPVAATPEKPKEAPVAAPKAAAEAPRALRD 125
Query: 115 VKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYA 174
+ P P + LA+P VR A+ GI L V +G GRVL ED+ Y
Sbjct: 126 SEAPRQRRQPGER--------PLASPAVRQRARDLGIELQFVQGSGPAGRVLHEDLDAYL 177
Query: 175 VQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSM 234
Q G+ A+ Q +AE D++ VP+ G +R + + M
Sbjct: 178 TQDGSVARSGGAA-----------------QGYAE---RHDEQAVPVIGLRRKIAQKMQD 217
Query: 235 AAK-IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSC 293
A + IPHF YVEEI+ L L+A K T LP L++++ +A+ +P +N+
Sbjct: 218 AKRRIPHFSYVEEIDVTDLEALRAHLNQKWGGQRGKLTLLPFLVRAMVVALRDFPQLNAR 277
Query: 294 FNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNP 353
+++E+ V G+ ++GIA + +GL VP +++ +S + E++RL + A+ +
Sbjct: 278 YDDEAEVVTRYGAVHVGIATQSDNGLMVPVLRHAESRDLWGNASEVARLAEAARSGKAQR 337
Query: 354 ADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNI 413
+ SG TITLS++G +GG P++N PEVAI+ + RI + P + GN+ +M ++
Sbjct: 338 QELSGSTITLSSLGVLGGIVSTPVINHPEVAIVGVNRIVERP-MVVGGNIVVRKMMNLSS 396
Query: 414 GADHRVLDGATVAKFCNEWKQLIENPELLLLQ 445
DHRV+DG A F + L+E+P L L+
Sbjct: 397 SFDHRVVDGMDAAAFIQAVRGLLEHPATLFLE 428
>sp|P35489|ODP2_ACHLA Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Acholeplasma laidlawii GN=pdhC
PE=1 SV=1
Length = 544
Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 219/431 (50%), Gaps = 29/431 (6%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
I D A GEGI E +L+W K GD+++E + L V++DK E+ S G + +L
Sbjct: 113 IYDFKFADIGEGIHEGTILQWNFKVGDKVKEGETLVVVETDKVNAELPSPVDGTILKLGK 172
Query: 83 APGNIVKVGETLLKLVVGDSAVP-----TPSSDVLESVKPPGSENSPDSKLNKDTVGG-- 135
A G ++ VGET+ +++G + P ++ S G+ + +++ D +GG
Sbjct: 173 AEGEVIHVGETV--VLIGQNGATLEQAQAPKAEAPVSEPKKGAGVVGEIEVSDDIIGGSE 230
Query: 136 ----------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPST 185
VLA+P R LA G+++ + +G+ GRV+K+DV + P+
Sbjct: 231 EVHVVATTGKVLASPVARKLASDLGVDIATIKGSGEQGRVMKDDVQN-------SKAPAE 283
Query: 186 ASVSADCREQLLGEEETYPQTFAEV-KWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHY 243
A + + +FA K D + V + ++ + M+ + IP
Sbjct: 284 AQAPVQQTQAPAQAAASVAPSFAAAGKPQGDVEVVKITRLRKAVSNAMTRSKSIIPETVL 343
Query: 244 VEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVIL 303
++EIN DALV + + IK T++ + K++ +A+ ++P N+ FN ++ EV +
Sbjct: 344 MDEINVDALVNFRNEAKGLAESKGIKLTYMAFIAKAVLIALKEFPMFNASFNHDTDEVYI 403
Query: 304 KGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITL 363
K N+G+A+ T GL VPNIKN LS+ E+ ++ L +++ +GGT T+
Sbjct: 404 KKFINLGMAVDTPDGLIVPNIKNADRLSVFELASQVRSLADDTIARKISMDQQTGGTFTI 463
Query: 364 SNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGA 423
+N G+ G FG P++N PE+AI+ +G+I++ P + + + + + +++ DHR++DGA
Sbjct: 464 TNFGSAGIAFGTPVINYPELAILGIGKIDRKPWVVGN-EIKIAHTLPLSLAVDHRIIDGA 522
Query: 424 TVAKFCNEWKQ 434
+F K+
Sbjct: 523 DGGRFLMRVKE 533
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
A GEGI E +L+W K GD+++E + L V++DK E+ S G + L G
Sbjct: 6 FADIGEGIHEGTVLQWNFKVGDKVKEGETLVIVETDKVNAELPSPVDGTIVSLGAKEGEE 65
Query: 88 VKVGETLLKL 97
+ VG+ ++ +
Sbjct: 66 IHVGQIIVTI 75
>sp|Q6ABX9|ODP2_LEIXX Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Leifsonia xyli subsp. xyli
(strain CTCB07) GN=pdhC PE=3 SV=1
Length = 452
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 219/474 (46%), Gaps = 88/474 (18%)
Query: 28 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 87
L GEG+ E E++ W V GD + Q + +++ K+ +E+ S ++G V +LL G
Sbjct: 8 LPDVGEGLTEAEIVSWKVAPGDSVAVNQVIVEIETAKSLVELPSPFEGTVGELLVVEGQT 67
Query: 88 VKVGETLLKLVVG--DSAVPTPSSDVL------------ESVKP---------------- 117
V+VG + + G D V P+ + ES +P
Sbjct: 68 VEVGTPIFTVNGGEADHGVTEPAGEAEQAAVDAAASVTHESEEPKAGAVIVGYGSAGHGT 127
Query: 118 -------------------------PGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGIN 152
PG +P + + G V+A P +R LAK G++
Sbjct: 128 SRRRVTHPGAAARPAAFPPAESAAEPG--RAPSTPVPPSGGGPVIAKPPIRKLAKDLGVD 185
Query: 153 LYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKW 212
L V ATG G V +EDVL+ Q ASV + + P+
Sbjct: 186 LSTVTATGAIGEVTREDVLREGTQ---------ASVFRNIQ---------TPE------- 220
Query: 213 YPDDK--TVPLRGFQRTMVKTMSMAA-KIPHFHYVEEINCDALVKLKASFQNNNSDPNIK 269
+PDD+ + ++G ++ + M +A PH +++ ++ ++ +K
Sbjct: 221 WPDDREERILVKGVRKAIANAMVTSAFSAPHVSVFVDVDATRTMEFVKRLKSAPDFVGVK 280
Query: 270 HTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQS 329
+ L + K++ A+ + P +NS + +E E+I++ N+GIA AT GL VPN+K Q
Sbjct: 281 VSPLLIMAKAIVWAVRRNPTVNSTWTDE--EIIVRHYVNLGIAAATPRGLIVPNVKEAQG 338
Query: 330 LSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMG 389
+S+LE+ L L A++ + PAD + GTIT++NIG G G P+LN EV I+A+G
Sbjct: 339 MSLLELAGALEELTLTAREGKTQPADMANGTITITNIGVFGMDTGTPILNPGEVGIVALG 398
Query: 390 RIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLL 443
I++ P + DG V P + T+ DHRV+DG ++F + +IE P LLL
Sbjct: 399 TIKQKPWVV-DGEVRPRFVTTLGGSFDHRVVDGDVASRFLADVASIIEEPALLL 451
>sp|P37942|ODB2_BACSU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Bacillus subtilis (strain
168) GN=bfmBB PE=3 SV=1
Length = 424
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 215/438 (49%), Gaps = 46/438 (10%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
I + + Q GE + E + KW V GD++ ++ P+ V +DK E+ S + G + +L+
Sbjct: 3 IEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVG 62
Query: 83 APGNIVKVGETLLKLVVGDSAVPT-------PSSDVLES--VKPPGSENSPDSKLNKDTV 133
G ++VGE + K+ + A P +S+ E+ K G+ + P+ K
Sbjct: 63 EEGQTLQVGEMICKIET-EGANPAEQKQEQPAASEAAENPVAKSAGAADQPNKKR----- 116
Query: 134 GGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY----AVQ-------KGAADG 182
+P V LA +GI+L V TG GR+ ++D+ + VQ K AA
Sbjct: 117 ----YSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQRLIETGGVQEQNPEELKTAAPA 172
Query: 183 PSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA-AKIPHF 241
P +AS EE +YP + A DK +P+ G ++ + M + +IPH
Sbjct: 173 PKSASKPEP------KEETSYPASAA------GDKEIPVTGVRKAIASNMKRSKTEIPHA 220
Query: 242 HYVEEINCDALVKLKASFQNN-NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLE 300
+ E++ +V + S +++ TF +K+++ A+ ++P MNS + + +
Sbjct: 221 WTMMEVDVTNMVAYRNSIKDSFKKTEGFNLTFFAFFVKAVAQALKEFPQMNSMWAGD--K 278
Query: 301 VILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGT 360
+I K NI IA+AT+ L VP IKN +I I K+++ L + +D +L D GGT
Sbjct: 279 IIQKKDINISIAVATEDSLFVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGT 338
Query: 361 ITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVL 420
T++N G+ G ++N P+ AI+ + I K P + D+G + ++ + + DHRVL
Sbjct: 339 FTVNNTGSFGSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAVRDMVNLCLSLDHRVL 398
Query: 421 DGATVAKFCNEWKQLIEN 438
DG +F KQ++E+
Sbjct: 399 DGLVCGRFLGRVKQILES 416
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 224/434 (51%), Gaps = 29/434 (6%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
+ ++ + + E I+E + +W + GD +E+ + L +++DK +E+T+ G + ++L
Sbjct: 1 MAEIKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLK 60
Query: 83 APGNIVKVGETLLKLV--VGDSAVPTPS--SDVLESVK------PPGSENSPDSKLNKDT 132
G+ V+VGE + + G+S+ P P+ ++ ESVK P E S +++ +
Sbjct: 61 DSGDTVQVGEIIGTISEGAGESSAPAPTEKTESKESVKEEKQAEPAAQEVSEEAQ--SEA 118
Query: 133 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 192
+A+P+ R LA+ GI+L V GRV K+DV Y +K A S +
Sbjct: 119 KSRTIASPSARKLAREKGIDLSQVPTGDPLGRVRKQDVEAY--EKPA----SKPAPQQKQ 172
Query: 193 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDAL 252
+ Q ++++ + K +T+ R +V+ +A + F+ E++ A+
Sbjct: 173 QPQAQKAQQSFDKPVEVQKMSRRRQTIAKR-----LVEVQQTSAMLTTFN---EVDMTAV 224
Query: 253 VKLKASFQNNNSDPN-IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGI 311
+ L+ ++ + N +K F+ K++ A+ KYP +N+ + E+I+K ++IGI
Sbjct: 225 MNLRKRRKDQFFEQNEVKLGFMSFFTKAVVAALKKYPLLNAEIQGD--ELIVKKFYDIGI 282
Query: 312 AMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGG 371
A+A GL VP +++ L+ I KE+ L + A++N+L ++ GG+ T++N G G
Sbjct: 283 AVAADEGLVVPVVRDADRLTFAGIEKEIGELAKKARNNKLTLSELQGGSFTITNGGTFGS 342
Query: 372 KFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNE 431
P+LN P+V I+ M +I+ P D+ P+M + + DHR++DG F
Sbjct: 343 LMSTPILNSPQVGILGMHKIQLRPVAIDEERFENRPMMYIALSYDHRIVDGKEAVGFLVT 402
Query: 432 WKQLIENPELLLLQ 445
K L+E+PE LLL+
Sbjct: 403 IKNLLEDPEQLLLE 416
>sp|O06159|BKDC_MYCTU Dihydrolipoyllysine-residue acyltransferase component of
branched-chain alpha-ketoacid dehydrogenase complex
OS=Mycobacterium tuberculosis GN=bkdC PE=1 SV=2
Length = 393
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 210/429 (48%), Gaps = 47/429 (10%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
I P+ GEG+ E + W V GD++E Q LC+V++ KA +EI S Y G++ +L
Sbjct: 7 IRSFPVPDLGEGLQEVTVTCWSVAVGDDVEINQTLCSVETAKAEVEIPSPYAGRIVELGG 66
Query: 83 APGNIVKVGETLLKLVVGDSAVPTPSSD-VLESVKPPGSENSPDSKLNKDTVGGVLATPT 141
A G+++KVG L+++ G +AV P+ + + ++ G++ + ++ LA P
Sbjct: 67 AEGDVLKVGAELVRIDTGPTAVAQPNGEGAVPTLVGYGADTAIETSRRTSRP---LAAPV 123
Query: 142 VRNLAKLYGINLYDVD-ATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEE 200
VR LAK ++L + +G G + + DVL A
Sbjct: 124 VRKLAKELAVDLAALQRGSGAGGVITRADVLAAARGG----------------------- 160
Query: 201 ETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASF 259
V PD + P+ G M + M+++ K IP E+ C L++L+ F
Sbjct: 161 ---------VGAGPDVR--PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRF 209
Query: 260 QNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNE--ESLEVILKGSHNIGIAMATQH 317
+ + P I T ++ L +A+ +NS + + E +V + ++G AT+
Sbjct: 210 VS--AAPEI--TPFALTLRLLVIALKHNVILNSTWVDSGEGPQVHVHRGVHLGFGAATER 265
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP + + Q + E+ ++ L A++ L PA+ G T T+SN GA+G G P+
Sbjct: 266 GLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALGVDDGVPV 325
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 437
+N PE AI+ +G I+ P + G V P MT+ DHRV+DGA VA+F E + LIE
Sbjct: 326 INHPEAAILGLGAIKPRPVVV-GGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIE 384
Query: 438 NPELLLLQM 446
+PE LL +
Sbjct: 385 SPETALLDL 393
>sp|Q5M729|OPD23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1
Length = 539
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 229/463 (49%), Gaps = 63/463 (13%)
Query: 16 ADLPASGIVDVP-LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYK 74
+DLP + +P L+ T + E + +W KEGD++ + LC V++DKAT+E+ +
Sbjct: 106 SDLPPHQEIGMPSLSPT---MTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 75 GKVAQLLHAPGNI-VKVGETLLKLVVGD---------------------SAVPTPSSDVL 112
G +A+++ A G+ ++VGE ++ + V D A PTP+
Sbjct: 163 GYLAKIVKAEGSKEIQVGE-VIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKE 221
Query: 113 ESVKPPGSENSPD-SKLNKDTVGG-VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDV 170
E VK P S P SK + G V A+P R LA+ + L D++ TG +GR++K D+
Sbjct: 222 EKVKQPSSPPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADI 281
Query: 171 LKYAVQ--KGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTM 228
+Y KGA PS S D + L D +P ++
Sbjct: 282 DEYLASSGKGATAKPSK---STDSKAPAL-----------------DYVDIPHSQIRKVT 321
Query: 229 VKTMSMAAK-IPHFHYVEEINCDALVKLKA---SFQNNNSDPNIKHTFLPSLIKSLSMAM 284
++ + + IPH++ + D L+ L++ SF+ + I L ++K+ ++A+
Sbjct: 322 ASRLAFSKQTIPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDL--VVKAAALAL 379
Query: 285 SKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQ 344
K P NS + ++ + + NI +A+ T++GL VP +K+ + I +E+ L Q
Sbjct: 380 RKVPQCNSSWTDDYIRQF--KNVNINVAVQTENGLYVPVVKDADRKGLSTIGEEVRLLAQ 437
Query: 345 LAKDNELNPADNSGGTITLSNIGA-IGGKFGAPLLNLPEVAIIAMGRIEK--VPRLSDDG 401
AK+N L P D GGT T+SN+G G K ++N P+ AI+A+G EK VP D
Sbjct: 438 KAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRVVPGNGPDQ 497
Query: 402 NVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 444
+ S M V + DHRV+DGA A++ +K IENP+ +LL
Sbjct: 498 FNFAS-YMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
>sp|Q6FYD4|ODO2_BARQU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
quintana (strain Toulouse) GN=sucB PE=3 SV=1
Length = 410
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 208/422 (49%), Gaps = 29/422 (6%)
Query: 32 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 91
GE + E + KWF K G+ + +PL +++DK T+E+ S GK+ +++ G+IV+V
Sbjct: 11 GESVTEATIGKWFKKLGEAVAVDEPLVELETDKVTVEVPSPVMGKLTEIIAKEGDIVEVN 70
Query: 92 ETLLKLVVGDSAVPTPSSDVLESV--KPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLY 149
L + G + + S S+ P E SP S G + P+ L
Sbjct: 71 AVLGFVESGAAGISQSFSPSATSIPEAPSELEQSPSSSATPS--GTMPPAPSAAKLMAEN 128
Query: 150 GINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE----QLLGEEETYPQ 205
I D+ +GK G++LKEDVL A+ +G S A+++A Q + EE
Sbjct: 129 NIAKSDISGSGKRGQILKEDVLG-ALAQGTKASTSVATLTASSSSAAPIQEMREER---- 183
Query: 206 TFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQN-NNS 264
V+ +T+ R + + AA + F+ E++ A++ L+ +++
Sbjct: 184 ----VRMTKLRQTI-----ARRLKDAQNTAAMLTTFN---EVDMSAVMDLRKRYKDLFEK 231
Query: 265 DPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNI 324
+K F+ K++ A+ ++P +N+ + +++ K N GIA+ T GL VP +
Sbjct: 232 KHGVKLGFMGFFTKAVCHALKEFPTVNAEID--GTDIVYKNYVNAGIAVGTDKGLVVPVV 289
Query: 325 KNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVA 384
++ +S+ EI KE+SRL +LA+D +L +D GGT T++N G G P+LN P+
Sbjct: 290 RDADQMSLAEIEKEISRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPILNAPQSG 349
Query: 385 IIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 444
I+ M I K + G + P+M + + DHR++DG F K+ +E+PE L+L
Sbjct: 350 ILGMHAI-KERAMVVGGQIIICPMMYLALSYDHRIVDGQEAVTFLVRVKESLEDPERLVL 408
Query: 445 QM 446
+
Sbjct: 409 DL 410
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 214/425 (50%), Gaps = 29/425 (6%)
Query: 24 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA 83
V + + GE + E + KW+ KEGD ++ + L ++++K T+E+ S G + +++ A
Sbjct: 3 VKIIVPSLGESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKA 62
Query: 84 PGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKP-PGSENSPDSKLNKDTVGGVLATPTV 142
G V VGE + + G+ AV T S+ E+ KP S+ P+ K V P+V
Sbjct: 63 DGANVAVGEEIGDINEGE-AVATNSN---EAAKPQTASQPVPEKVPKKPAVANNTLAPSV 118
Query: 143 RNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEET 202
+ L ++ ++ TGKDGR+ K DVL+ + P+ A+ S + E
Sbjct: 119 QKLVTENKLDPNNIKGTGKDGRITKGDVLE------TMNAPTPAATSTTSSAKASEER-- 170
Query: 203 YPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNN 262
V+ KT+ R + + + AA + F+ EI+ ++ L+ +++
Sbjct: 171 ----VERVRMSRLRKTIAQR-----LKDSQNTAAILTTFN---EIDMSKVIALRGKYKDE 218
Query: 263 -NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAV 321
+K F+ +++ A+ P +N+ + + L + K ++IG+A+ T+ GL V
Sbjct: 219 FEKKHGVKLGFMSFFVRATIEALKLIPSVNAEIDGDDL--VYKNYYDIGVAVGTEQGLVV 276
Query: 322 PNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLP 381
P +++ + +I K + L + A+D +L+ AD SGGT ++SN G G P++N P
Sbjct: 277 PVVRDADKMGFADIEKTIGGLAKKARDGKLSMADLSGGTFSISNGGVYGSLLSTPIINPP 336
Query: 382 EVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPEL 441
+ I+ + + E+ ++ DG + P+M + + DHR++DG F + K+LIE+PE
Sbjct: 337 QSGILGLHKTEE-RVVAIDGKIEIRPMMYIALSYDHRIIDGKEAVSFLVKIKELIESPEK 395
Query: 442 LLLQM 446
LLL +
Sbjct: 396 LLLNL 400
>sp|P57302|ODP2_BUCAI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=aceF PE=3 SV=1
Length = 396
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 201/416 (48%), Gaps = 29/416 (6%)
Query: 34 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 93
G+ E E+++ V ++I Q L V+ DK ++EI S G V + G +K
Sbjct: 5 GLEEVEIIEILVSINEKIAPEQGLITVEGDKTSMEIPSPISGIVKHIFIKIGEKIKTDAL 64
Query: 94 LLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINL 153
+++ V + + E N + KD ATP +R LA+ INL
Sbjct: 65 IMRCEVENIDFHVKKKE--EICLDNNVLNKVEKNFKKDIFFH--ATPLIRRLARNLNINL 120
Query: 154 YDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWY 213
YDV TG R+LKED+ Y ++ +E L+ EE F + K
Sbjct: 121 YDVVGTGPKNRILKEDLDLY---------------QSNIKENLI--EEKNKINFGDSK-K 162
Query: 214 PDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQN---NNSDPNIK 269
K + L Q+ + + IPH +E++ L K + + N N N
Sbjct: 163 SKTKELELSDIQKNIGNNLHRNWMNIPHVTQFDEVDITILEKFRQKYNNEKRNQKKTNEN 222
Query: 270 HTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQS 329
T L +IK ++ A+ K+P NS N + ++ILK NIG A+ + L VP +K+V
Sbjct: 223 ITILVFIIKVVAYALEKFPIFNSSLNINNKKIILKKYINIGFAIDVNNDLFVPVLKDVNK 282
Query: 330 LSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMG 389
+I +++ EL L + A+ +LN D +GG T+SN+G IGG + +P++N PEVAI+ +
Sbjct: 283 KNIKQLSSELILLSEKARTRKLNIEDMTGGCFTISNLGGIGGSWFSPIINSPEVAILGIS 342
Query: 390 RIEKVPRLSDDGNVY-PSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 444
+ + P S +G + PS ++ +++ DHRV++GA A+F +++ + L++
Sbjct: 343 KSQIKP--SWNGKEFIPSLMLPLSLSYDHRVINGAYAARFITFISRVLSDMHFLIM 396
>sp|Q8K9T8|ODP2_BUCAP Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=aceF PE=3 SV=2
Length = 402
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 202/417 (48%), Gaps = 25/417 (5%)
Query: 34 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 93
G+ E E+ + VK G+EI+ Q L V+ DKA++EI S G V + G VK
Sbjct: 5 GLEEVEVTEILVKIGEEIKLDQGLITVEGDKASMEIPSPISGIVKDITIKIGEKVKTSSI 64
Query: 94 LLKLVVGDSAVPTPSSDVLESVKPPG--SENSPDSKLNKDTVGGVLATPTVRNLAKLYGI 151
++ V + D L +K +EN + K + + V ATP VR LA+ +
Sbjct: 65 IMIFKVNNLNSIKNEKD-LNYIKTEKKLNENFLEEKKDIKKIVLVHATPVVRRLARHLNV 123
Query: 152 NLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVK 211
+L ++ +G R+LKED+ Y + S+ ++ + + F E+
Sbjct: 124 DLKNITPSGPKNRILKEDIELYI--RNNTSNKSSFNIEKNNTTNF------HKDLFNEI- 174
Query: 212 WYPDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQNNNSDPN--- 267
P+ Q+ + K + IPH +E+N L + + + N
Sbjct: 175 --------PITNIQQIIGKNLHQNWVNIPHVTQFDEVNITLLEEFRHKYNTEKKQKNNMC 226
Query: 268 IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNV 327
K T LP +IKS++ + ++P NS + + LK N+GIA+ Q+ L VP +KNV
Sbjct: 227 SKITILPFIIKSVAYGLLEFPIFNSSLSVNKKTIFLKKYVNVGIAVDVQNALFVPVLKNV 286
Query: 328 QSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIA 387
+I ++ EL L + A +N+L+ +D G T+SN+G IGG + +P++N PEVAI+
Sbjct: 287 DKKNIANLSSELIFLSKKAHENKLDASDMKDGCFTISNLGGIGGSWFSPIINSPEVAILG 346
Query: 388 MGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 444
+ + P L + PS ++ +++ DHRV++GA A+F +++ + L++
Sbjct: 347 VSKALIKP-LWNGKEFIPSLMLPLSLSYDHRVINGADAARFLTFIGKMLSDIRFLIM 402
>sp|Q8RWN9|OPD22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2
Length = 539
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 228/463 (49%), Gaps = 63/463 (13%)
Query: 16 ADLPASGIVDVP-LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYK 74
+DLP + +P L+ T + E + +W KEGD++ + LC V++DKAT+E+ +
Sbjct: 106 SDLPPHQEIGMPSLSPT---MTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 75 GKVAQLLHAPG-NIVKVGETLLKLVVGDSAVP-----TPSSDV---------------LE 113
G +A+++ G ++VGE + V + + TPSSD E
Sbjct: 163 GFLAKIVKEEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAPSLPKEE 222
Query: 114 SVKPPGSENSPDSKLNKDTVG----GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKED 169
V+ P S +P++K++K + + A+P R LA+ + L + TG +GR++K D
Sbjct: 223 KVEKPAS--APEAKISKPSSAPSEDRIFASPLARKLAEDNNVPLSSIKGTGPEGRIVKAD 280
Query: 170 VLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMV 229
V + + G+ + + S D + L D +P ++
Sbjct: 281 VEDF-LASGSKETTAKPSKQVDSKVPAL-----------------DYVDIPHTQIRKVTA 322
Query: 230 KTMSMAAK-IPHFHYVEEINCDALVKLKA---SFQNNNSDPNIKHTFLPSLIKSLSMAMS 285
++ + + IPH++ + D ++ L++ SFQ + I L +IK+ ++A+
Sbjct: 323 SRLAFSKQTIPHYYLTVDTCVDKMMGLRSQLNSFQEASGGKRISVNDL--VIKAAALALR 380
Query: 286 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQL 345
K P NS + +E + + NI +A+ T++GL VP +K+ + I +E+ L Q
Sbjct: 381 KVPQCNSSWTDEYIRQF--KNVNINVAVQTENGLYVPVVKDADKKGLSTIGEEVRFLAQK 438
Query: 346 AKDNELNPADNSGGTITLSNIGA-IGGKFGAPLLNLPEVAIIAMGRIEK--VPRLS-DDG 401
AK+N L P D GGT T+SN+G G K ++N P+ AI+A+G EK VP D
Sbjct: 439 AKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVVPGTGPDQY 498
Query: 402 NVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 444
NV + M+V + DHRV+DGA A++ +K IE PE +LL
Sbjct: 499 NV--ASYMSVTLSCDHRVIDGAIGAEWLKAFKGYIETPESMLL 539
>sp|P45118|ODP2_HAEIN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=aceF PE=3 SV=1
Length = 567
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 221/469 (47%), Gaps = 50/469 (10%)
Query: 20 ASGIVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQ 79
AS IV+V + G E + + V GD I E Q L V+ DKA++E+ + + G V +
Sbjct: 105 ASAIVEVNVPDIGGD--EVNVTEIMVAVGDTITEEQSLITVEGDKASMEVPAPFGGVVKE 162
Query: 80 LLHAPGNIVKVGETLLKL-VVG---------------------------------DSAVP 105
+L G+ V G +++ V+G D+
Sbjct: 163 ILVKSGDKVSTGSLIMRFEVLGAAPAESASAPASTSAPQTAAPATTAQAPQAAAPDTTAQ 222
Query: 106 TPSSDVLESVKPPGSENSPDSKLNKDTV----GGVLATPTVRNLAKLYGINLYDVDATGK 161
P + ++ N+ S L+++ V G ATP +R LA+ +G+NL V TG+
Sbjct: 223 APQAAAPDTTAQAAQSNNNVSGLSQEQVEASTGYAHATPVIRRLAREFGVNLDKVKGTGR 282
Query: 162 DGRVLKEDVLKY------AVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVKWYPD 215
GR++KED+ Y A + GA + V+ LL + F E++
Sbjct: 283 KGRIVKEDIEAYVKTAVKAYESGATAQATGNGVANGAGLGLLPWPKVDFSKFGEIEEVEL 342
Query: 216 DKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPS 275
+ + G + + + + HF + + +A K + + + +K T +
Sbjct: 343 SRINKISG--ANLHRNWVIIPHVTHFDKADITDLEAFRKEQNALREKQK-LGVKITPVVF 399
Query: 276 LIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEI 335
++K+++ A+ YP NS E++ +ILK NIG+A+ T +GL VP KNV I+E+
Sbjct: 400 IMKAVAKALEAYPRFNSSITEDAQRLILKKYINIGVAVDTPNGLVVPVFKNVNKKGIIEL 459
Query: 336 TKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVP 395
++EL + + A++ +L +D GG T+S++G IG AP++N PEVAI+ + + P
Sbjct: 460 SRELMEVSKKAREGKLTASDMQGGCFTISSLGGIGTTHFAPIVNAPEVAILGVSKSSMEP 519
Query: 396 RLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 444
+ + P I+ +++ DHRV+DGA A+F + ++ + L++
Sbjct: 520 -VWNGKEFAPRLILPMSLSFDHRVIDGADGARFISYLGSVLADLRRLVM 567
>sp|Q49110|ODP2_MYCCT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycoplasma capricolum subsp.
capricolum (strain California kid / ATCC 27343 / NCTC
10154) GN=pdhC PE=3 SV=1
Length = 438
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 211/440 (47%), Gaps = 26/440 (5%)
Query: 26 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 85
V A GEG+ E + + VK GD ++E Q L V++DK EI + GK+A + G
Sbjct: 4 VKFADIGEGLTEGTVAEVLVKVGDVVKEGQSLYFVETDKVNSEIPAPVAGKIAVINIKAG 63
Query: 86 NIVKVGETLLKLVVGD--SAVPTPSSDVLESVKPPGSEN----------SPDSKLNKDTV 133
+KVG+ ++++ G SA P ++ K E S D + K T
Sbjct: 64 QEIKVGDVVMEIEDGSDTSATSEPKAETKSEAKVEVVEENASVVGATPVSNDVIVRKQTT 123
Query: 134 -----GGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY---AVQKGAADGPST 185
+ ATP R +A I+L V TG + R+L D+ + + Q +
Sbjct: 124 TVNKSSTIKATPLARKVAADLNIDLSLVTPTGPNQRILVADIKNHQASSTQLASQPISQP 183
Query: 186 ASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYV 244
A + Q + + A + W VP+ G ++ VK M+ + +I F +
Sbjct: 184 APTPSPSAHQTIAPTIKVVEPSAPLSW----DEVPMNGVRKATVKAMTKSHTEIAAFTGM 239
Query: 245 EEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILK 304
+ + K++ +++ + IK T+L +IK+++ ++ P +N + + ++
Sbjct: 240 KNTDITETHKMRTELKDHAAASGIKLTYLAFIIKAVAKSLRDMPNINVRGDFANNKIQFM 299
Query: 305 GSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLS 364
+ NIGIA+ T +GL VP IK LS+ EI ++S L AKD +L A+ + T T+S
Sbjct: 300 HNINIGIAVDTPNGLMVPVIKGADHLSVFEIAIKISELANKAKDGKLTRAEMTEATFTVS 359
Query: 365 NIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGAT 424
N G++G + P++N PE AI+ +G + + P L +G + IM +++ DHR++DGA
Sbjct: 360 NFGSVGLDYATPIINSPESAILGVGTMSQTP-LYINGELQKRFIMPLSMTCDHRIIDGAD 418
Query: 425 VAKFCNEWKQLIENPELLLL 444
+F + + + P LL +
Sbjct: 419 AGRFLIKVQDYLSKPVLLFM 438
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia prowazekii (strain
Madrid E) GN=pdhC PE=3 SV=1
Length = 408
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 213/423 (50%), Gaps = 45/423 (10%)
Query: 37 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 96
E L +W KEGD++ + + +++DKAT+E+ S +G +A+++ P N V L
Sbjct: 16 EGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKII-IPQNSQNVPVNSLI 74
Query: 97 LVVG---------DSAVPTPSSDVLESVKPPGSENSPDSKLN----KDTVGGVLATPTVR 143
V+ DS + +S L + S DS N K + A+P +
Sbjct: 75 AVLSEEGEDKADIDSFIAQNNSVSLSLKTDATLKKSNDSITNVEGIKHDSNKIFASPLAK 134
Query: 144 NLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETY 203
LAK+ I L +V +G GR++K+D+L Y ST+S R+ E Y
Sbjct: 135 RLAKIGDIRLENVQGSGPHGRIVKQDILSY--------DSSTSSNKIVYRDT-----EEY 181
Query: 204 PQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNN 262
++VP ++ + K + + + +PHF+ E N D L+ ++ +
Sbjct: 182 -------------RSVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDVREDINKS 228
Query: 263 NSDPNI-KHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAV 321
S+ + K + +I +++ A+ + P N+ ++E+++ + +I +A+A ++G+
Sbjct: 229 FSEDKVTKISVNDFIILAVAKALQEVPNANASWSEDAIR--YYNNVDISVAVAIENGIVT 286
Query: 322 PNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLP 381
P +K+ +I+E+++E+ L + AKDN+L P + GG T+SN+G G K ++N P
Sbjct: 287 PIVKDANKKNIIELSREMKTLIKKAKDNKLTPIEFQGGGFTISNLGMYGIKNFNAIINTP 346
Query: 382 EVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPEL 441
+ I+ +G K + +D + + IM V + ADHRV+DGA A+F +K+ IENP L
Sbjct: 347 QSCIMGVGASTKRAIVKND-QIIIATIMDVTLSADHRVIDGAVSAEFLASFKRFIENPVL 405
Query: 442 LLL 444
+L+
Sbjct: 406 MLI 408
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 210/427 (49%), Gaps = 32/427 (7%)
Query: 24 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA 83
V + + GE + E + KW+ KEGD ++ + L ++++K T+E+ + G + ++
Sbjct: 3 VKIIVPSLGESVTEATIAKWYKKEGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKISKT 62
Query: 84 PGNIVKVGETLLKLVVG---DSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATP 140
G V VGE + ++ G ++A S ++V P SE + K V + P
Sbjct: 63 DGANVAVGEEIGEINEGAAANTAGTNNESAKAQAVTQPTSEKP----VEKPAVVNNILAP 118
Query: 141 TVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEE 200
+V+ L ++ ++ TG+DGR+ K DVL+ AA T + + + R Q
Sbjct: 119 SVQKLVTENKLDPNNIKGTGRDGRITKGDVLETINTPSAATSTPTVNKTNEERVQ----- 173
Query: 201 ETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQ 260
V+ KT+ R + + + AA + F+ EI+ ++ L+ ++
Sbjct: 174 --------RVRMSRLRKTIAQR-----LKDSQNTAAILTTFN---EIDMSKVIALRNQYK 217
Query: 261 NNNSDPN-IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGL 319
+ +K F+ +K+ A+ P +N+ + + L + K ++IG+A+ T+ GL
Sbjct: 218 EEFEKKHLVKLGFMSFFVKATIEALKLIPSVNAEIDGDDL--VYKNYYDIGVAVGTEQGL 275
Query: 320 AVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLN 379
VP +++ + E+ K + L + A++ +L+ AD SGGT ++SN G G P++N
Sbjct: 276 VVPVVRDADKMGFAEVEKAIGTLAKKAREGKLSMADLSGGTFSISNGGVYGSLLSTPIIN 335
Query: 380 LPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENP 439
P+ I+ + + E+ + DG + P+M + + DHR++DG F + K+LIENP
Sbjct: 336 PPQSGILGLHKTEERA-VVIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKELIENP 394
Query: 440 ELLLLQM 446
E LLL +
Sbjct: 395 EKLLLNL 401
>sp|Q68WK6|ODP2_RICTY Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=pdhC PE=3 SV=1
Length = 404
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 210/420 (50%), Gaps = 49/420 (11%)
Query: 40 LLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 99
L +W KEGD++ + + +++DKAT+E+ S +G +A+++ P N V L V+
Sbjct: 19 LARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKII-IPQNSQNVPVNSLIAVL 77
Query: 100 GDSAVPTPSSDVL-------------ESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLA 146
+ T D ++ +E+ + ++ K + + A+P + LA
Sbjct: 78 SEEGESTADIDAFIAKNNSVSLSLKTDTTLKKANESITNVEVVKHDLSKIFASPLAKRLA 137
Query: 147 KLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQT 206
K+ I L V +G GR++K+D+L Y+ PSTA + D E
Sbjct: 138 KIRNIRLESVQGSGPHGRIVKQDILSYS--------PSTA-YNRDTEEY----------- 177
Query: 207 FAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNNSD 265
++VP ++ + K + + + +PHF+ E N D L+ ++ + S+
Sbjct: 178 ----------RSVPNNNIRQIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDINKSFSE 227
Query: 266 PNI-KHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNI 324
+ K + +I +++ A+ + P N+ + E+++ + +I +A+A ++G+ P I
Sbjct: 228 DKLTKISVNDFIILAVAKALQEVPNANASWAEDAIR--YYNNVDISVAVAIENGIVTPII 285
Query: 325 KNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVA 384
K+ +I+E++ E+ L + AKDN+L P + GG T+SN+G G K ++N P+
Sbjct: 286 KDANKKNIIELSHEMKILIKKAKDNKLTPVEFQGGGFTISNLGMYGIKNFNAIINTPQSC 345
Query: 385 IIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 444
I+ +G K + +D + + IM V + ADHRV+DGA A+F +K+ IE+P L+L+
Sbjct: 346 IMGVGASTKRAIVKND-QIIIATIMDVTLSADHRVIDGAVSAEFLASFKRFIEHPVLMLI 404
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3
SV=2
Length = 440
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 216/447 (48%), Gaps = 56/447 (12%)
Query: 35 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH-------APGNI 87
+ E L KW VKEGD ++ L +++DKA +E + G +A++L A G +
Sbjct: 14 MTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGIIAKILVPEGSENIAVGQV 73
Query: 88 VKV----GETLLKLVVGDSAV---PTPSSDVLESVKPPGSENSPDSKLNK---------- 130
+ V GE + ++ S+ P+ +DV + S D+ L+K
Sbjct: 74 IAVMAEAGEDVSQVAASASSQISEPSEKADVAQKETADSETISIDASLDKAISNAGYGNK 133
Query: 131 ---------DTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKG-AA 180
+ G + A+P + LAK ++L V+ +G GR++K D+ + + A+
Sbjct: 134 TENMTASYQEKAGRIKASPLAKRLAKKNHVDLKQVNGSGPHGRIIKADIEAFIAEANQAS 193
Query: 181 DGPSTASVSADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IP 239
PS ++ P+ ++ ++ L +R + + ++ + + IP
Sbjct: 194 SNPSVST----------------PEASGKITHDTPHNSIKLSNMRRVIARRLTESKQNIP 237
Query: 240 HFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL 299
H + ++ DAL+KL++ + + NIK + LIK+ ++A+ P +N F+ + +
Sbjct: 238 HIYLTVDVQMDALLKLRSELNESLAVQNIKISVNDMLIKAQALALKATPNVNVAFDGDQM 297
Query: 300 EVILKGSH-NIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSG 358
L+ S +I +A++ + GL P +K + S+ ++ E+ L A++ L P + G
Sbjct: 298 ---LQFSQADISVAVSVEGGLITPILKQADTKSLSALSVEMKELIARAREGRLQPQEYQG 354
Query: 359 GTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHR 418
GT ++SN+G G K ++N P+ +I+A+G E+ P + DD + + + T+ DHR
Sbjct: 355 GTSSISNMGMFGIKQFNAVINPPQASILAIGSGERRPWVIDDA-ITIATVATITGSFDHR 413
Query: 419 VLDGATVAKFCNEWKQLIENPELLLLQ 445
V+DGA A F + +K L+E P +L Q
Sbjct: 414 VIDGADAAAFMSAFKHLVEKPLGILAQ 440
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=pdhC PE=3 SV=1
Length = 412
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 213/432 (49%), Gaps = 55/432 (12%)
Query: 35 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETL 94
+ E L +W KEGD++ + + +++DKAT+E+ + +G +A+++ P N V
Sbjct: 14 MTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIV-IPQNSQNVPVNS 72
Query: 95 LKLVVGD----------------SAVPTPSSDVLESVKPPGSENSPDSK----LNKDTVG 134
L V+ + S P+P +D + P EN + + + K V
Sbjct: 73 LIAVLSEEGEEKTDIDAFIAKNNSVSPSPKTD---ANLPKPHENIANVEEQVTVIKHDVS 129
Query: 135 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 194
+ A+P + LAK+ I V +G GR++K+D+L Y PSTA R
Sbjct: 130 RIFASPLAKRLAKMRNIRFESVKGSGPHGRIVKQDILSYT--------PSTAHNKIVSRN 181
Query: 195 QLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALV 253
P+ + + VP ++ + K + + + +PHF+ E N D L+
Sbjct: 182 ---------PEEY---------RLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLL 223
Query: 254 KLKASFQNNNS-DPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIA 312
++ S D + + + +I +++ A+ + P N+ + E+++ + +I +A
Sbjct: 224 DIREDINKFFSEDKSTRISVNDFIILAVAKALQEVPNANASWGEDAIR--YYNNVDISVA 281
Query: 313 MATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGK 372
+A ++GL P +KN +ILE+++E+ L + AKDN+L P + GG T+SN+G G K
Sbjct: 282 VAIENGLVTPIVKNANQKNILELSREMKALIKKAKDNKLTPEEFQGGGFTISNLGMYGIK 341
Query: 373 FGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEW 432
++N P+ I+ +G K + +D + + IM V + ADHRV+DGA A+F +
Sbjct: 342 NFNAIINPPQSCIMGVGASAKRAIVKND-QITIATIMDVTLSADHRVVDGAVGAEFLVAF 400
Query: 433 KQLIENPELLLL 444
K+ IE+P L+L+
Sbjct: 401 KKFIESPVLMLI 412
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 207/427 (48%), Gaps = 38/427 (8%)
Query: 24 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA 83
V + + GE I E + KW+ K+GD ++ + L ++++K T+E+ + G + ++
Sbjct: 3 VKIIVPSLGESITEATIAKWYKKQGDSVKTDELLLEIETEKVTLEVNAPCNGTIGKISKT 62
Query: 84 PGNIVKVGETLLKLVVGDSAVPTPS---SDVLESVKPPGSENSPDSKLNKDTVGGVLATP 140
G V VGE + ++ G SA + S ++V P SE K V P
Sbjct: 63 EGANVAVGEEIGEINEGASANTAGTNNESAKAQAVTQPTSE--------KPAVANNTLAP 114
Query: 141 TVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEE 200
+V+ L ++ ++ TG+DGR+ K DVL A +T S A +
Sbjct: 115 SVQKLVTENKLDPNNIKGTGRDGRITKGDVL-------ATINTTTTSAPAISK------- 160
Query: 201 ETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQ 260
+ + V+ KT+ R + + + AA + F+ EI+ ++ L+ ++
Sbjct: 161 -SNEERVQRVRMSRLRKTIAQR-----LKDSQNTAAILTTFN---EIDMSKVIALRNQYK 211
Query: 261 NNNSDPN-IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGL 319
+ +K F+ +K+ A+ P +N+ + + L + K ++IG+A+ T+ GL
Sbjct: 212 EEFEKKHAVKLGFMSFFVKATIEALKLIPSVNAEIDGDDL--VYKNYYDIGVAVGTEQGL 269
Query: 320 AVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLN 379
VP +++ + E+ K + L + A++ +L+ AD SGGT ++SN G G P++N
Sbjct: 270 VVPVVRDADKMGFAEVEKTIGILAKQAREGKLSMADLSGGTFSISNGGVYGSLLSTPIIN 329
Query: 380 LPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENP 439
P+ I+ + + E+ + DG + P+M + + DHR++DG F + KQLIENP
Sbjct: 330 PPQSGILGLHKTEERA-VVIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKQLIENP 388
Query: 440 ELLLLQM 446
E LLL +
Sbjct: 389 EKLLLNL 395
>sp|Q4ULG1|ODP2_RICFE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=pdhC PE=3 SV=1
Length = 412
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 206/429 (48%), Gaps = 49/429 (11%)
Query: 35 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETL 94
+ E L +W KEGD++ + + +++DKAT+E+ + +G +A+++ P N V
Sbjct: 14 MTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIV-IPQNSQNVPVNS 72
Query: 95 LKLVVGDSAVPTPSSDVL------ESVKPPGSENSPDSKLN-----------KDTVGGVL 137
L V+ + D S P N P N K +
Sbjct: 73 LIAVLSEEGEEKTDIDAFIAKNNNVSPSPKTDANLPKPHENIAKVEEQVAVIKHDASKIF 132
Query: 138 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLL 197
A+P + LAK+ I L V +G GR++K+D+L Y PST R
Sbjct: 133 ASPLAKRLAKMGNIRLESVKGSGPHGRIVKQDILSYT--------PSTVHNKIVSRN--- 181
Query: 198 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLK 256
P+ + + VP ++ + K + + + +PHF+ E N D L+ ++
Sbjct: 182 ------PEEY---------RLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIR 226
Query: 257 ASFQNNNS-DPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMAT 315
+ S D + + + +I +++ A+ + P N+ + E+++ + +I +A+A
Sbjct: 227 EDINKSFSEDKSTRISVNDFIILAVAKALQELPNANASWGEDAIR--YHNNVDISVAVAI 284
Query: 316 QHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGA 375
++GL P +KN +I+E+++E+ L + AKDN+L P + GG T+SN+G G K
Sbjct: 285 ENGLVTPIVKNANQKNIIELSREMKELIKKAKDNKLTPEEFQGGGFTISNLGMYGIKNFN 344
Query: 376 PLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQL 435
++N P+ I+ +G K + +D V + IM V + ADHRV+DGA A+F +K+
Sbjct: 345 AIINPPQSCIMGVGASAKRAIVKND-QVTIATIMDVTLSADHRVVDGAVGAEFLAAFKKF 403
Query: 436 IENPELLLL 444
IE+P L+L+
Sbjct: 404 IESPALMLI 412
>sp|Q8GCY1|ODO2_BARVB Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
vinsonii subsp. berkhofii GN=sucB PE=3 SV=1
Length = 411
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 199/417 (47%), Gaps = 18/417 (4%)
Query: 32 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 91
GE + E + KWF K G+ + +PL +++DK T+E+ S GK+ +++ G+ V+V
Sbjct: 11 GESVTEATVGKWFKKLGEAVAIDEPLVELETDKVTVEVPSPVAGKLFEIIAKEGDTVEVN 70
Query: 92 ETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGI 151
L + G ++V S SV SE S N + P+ L I
Sbjct: 71 ALLGAVEAGAASVAKSPSSSETSVSAAPSELEQSSSSNT-----MPPAPSAAKLMAENNI 125
Query: 152 NLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETYPQTFAEVK 211
D+ +GK G++LKEDVL Q G P S S+ + Q E +
Sbjct: 126 AKSDILGSGKRGQILKEDVLNVLAQ-GVKTSPPAVSASSSTPVSVSSSAVAPVQEMREER 184
Query: 212 WYPDDKTVPLR-GFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQN-NNSDPNIK 269
+ LR R + + AA + F+ E++ A++ L+ +++ +K
Sbjct: 185 V----RMTKLRQTIARRLKDAQNTAAMLTTFN---EVDMSAVMGLRKRYKDLFEKKHGVK 237
Query: 270 HTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQS 329
F+ K++ A+ + P +N+ + ++I K N GIA+ T GL VP +++
Sbjct: 238 LGFMGFFTKAVCHALKELPAVNAEID--GTDIIYKNYVNAGIAVGTDKGLVVPVVRDADQ 295
Query: 330 LSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMG 389
+S+ EI KE+ RL +LA+D +L +D GGT T++N G G P+LN P+ I+ M
Sbjct: 296 MSLAEIEKEIGRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPILNAPQSGILGMH 355
Query: 390 RIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQM 446
I K + DG + P+M + + DHR++DG F K+ +E+PE L+L +
Sbjct: 356 AI-KERAMVVDGQIAIRPMMYLALSYDHRIVDGQEAVTFLVRVKESLEDPERLVLDL 411
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 212/431 (49%), Gaps = 44/431 (10%)
Query: 35 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGN-------- 86
+ E L +W KEGD+I + + +++DKAT+E+ + +G +A+++ G+
Sbjct: 14 MTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQGSQNVPVNSL 73
Query: 87 ---IVKVGETL--LKLVVGDSAVPTPSSDVL----ESVKPPGSENSPDSKLNKDTVGGVL 137
+++ GE L ++ + + +P + + E++ P + + + V
Sbjct: 74 IAVLIEEGEELSGIEEFIAKNNSNSPKKEEISKPAETIAPQNVKEENITTASDQNNIKVF 133
Query: 138 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLL 197
A+P + LAK+ + + ++ +G GR++K+DVL + KG + S VS + E L
Sbjct: 134 ASPLAKRLAKIQNVRIEEIKGSGPHGRIIKQDVLSH---KGGSKALSNKIVSRNPEEYRL 190
Query: 198 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKA 257
+ A+ + + +PHF+ E N D L+ ++
Sbjct: 191 APNNNIRKIIAK--------------------RLLESKQTVPHFYLSIECNVDKLLDIRE 230
Query: 258 SFQNN-NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQ 316
+ D + K + +I +++ A+ + P N+ + ++++ + +I +A+A +
Sbjct: 231 DINKSFGDDKSAKISVNDFIILAVAKALQEVPNANASWGDDAIRYY--NNVDISVAVAIE 288
Query: 317 HGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAP 376
+GL P I+N +I++++ E+ L + A++N+L P + GG T+SN+G G K
Sbjct: 289 NGLVTPIIRNADQKNIVDLSSEMKGLIKKARENKLTPEEFQGGGFTISNLGMYGIKNFNA 348
Query: 377 LLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLI 436
++N P+ I+ +G K + +D + + IM V + ADHRV+DGA A+F +K+ I
Sbjct: 349 IINPPQSCIMGVGSSSKRAIVKND-QISIATIMDVTLSADHRVVDGAVGAEFLAAFKRFI 407
Query: 437 ENPELLLLQMR 447
E+P L+LL R
Sbjct: 408 ESPALMLLYTR 418
>sp|P06959|ODP2_ECOLI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Escherichia coli (strain K12)
GN=aceF PE=1 SV=3
Length = 630
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 202/413 (48%), Gaps = 33/413 (7%)
Query: 37 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 96
E E+ + VK GD++ Q L V+ DKA++E+ + + G V +L G+ VK G ++
Sbjct: 218 EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMI 277
Query: 97 LVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGG----------VLATPTVRNLA 146
V +A + + P ++ + G V ATP +R LA
Sbjct: 278 FEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLA 337
Query: 147 KLYGINLYDVDATGKDGRVLKEDVLKY---AVQKGAADGPSTASVSADCREQLLGEEETY 203
+ +G+NL V TG+ GR+L+EDV Y A+++ A +T G
Sbjct: 338 REFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGG----------GIPGML 387
Query: 204 PQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQNN 262
P + + + + V L Q+ +S IPH + ++ + + +L+A +
Sbjct: 388 PWPKVDFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTD---ITELEAFRKQQ 444
Query: 263 NSDP-----NIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQH 317
N + ++K T + ++K+++ A+ + P NS +E+ + LK NIG+A+ T +
Sbjct: 445 NEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPN 504
Query: 318 GLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPL 377
GL VP K+V I+E+++EL + + A+D +L + GG T+S+IG +G AP+
Sbjct: 505 GLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPI 564
Query: 378 LNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCN 430
+N PEVAI+ + + P + + P ++ +++ DHRV+DGA A+F
Sbjct: 565 VNAPEVAILGVSKSAMEP-VWNGKEFVPRLMLPISLSFDHRVIDGADGARFIT 616
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 34 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 93
G E E+ + VK GD++E Q L V+ DKA++E+ + + G V ++ G+ V G
Sbjct: 114 GSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSL 173
Query: 94 LL 95
++
Sbjct: 174 IM 175
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 34 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 93
G E E+ + VK GD++E Q L V+ DKA++E+ S G V ++ + G+ + G
Sbjct: 11 GADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVSVGDKTQTGAL 70
Query: 94 LL 95
++
Sbjct: 71 IM 72
>sp|Q5HPC7|ODO2_STAEQ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3
SV=1
Length = 420
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 209/434 (48%), Gaps = 26/434 (5%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
+ +V + + E I E + +W GD +++ + + +++DK +E+ S G +++ L
Sbjct: 1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 83 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESV-------KPPGSENSPDSKLNKDTVGG 135
G+ V+VG+ + VVG+ V T + ES K +++P+S +++T
Sbjct: 61 EEGDTVEVGQAVA--VVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDN 118
Query: 136 ----VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSAD 191
+ ATP+ R A+ G++L +V G D VL++D ++ + QK ++ + S S +
Sbjct: 119 SQQRINATPSARRHARKNGVDLSEVSGKGND--VLRKDDVENS-QKSSSQTAKSESKSQN 175
Query: 192 CREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDA 251
+ + P K KT + +++ + A + F+ V+ N
Sbjct: 176 SGSKQTNNNPSKP--VIREKMSRRKKTAA-----KKLLEVSNQTAMLTTFNEVDMTNVMD 228
Query: 252 LVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGI 311
L K K + D K F+ K+ A+ KYP +N+ + + + I K ++IGI
Sbjct: 229 LRKRKKEQFIKDHD-GTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDM--ITKQFYDIGI 285
Query: 312 AMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGG 371
A++T GL VP +++ + EI +E++ L A+D +L D G+ T++N G G
Sbjct: 286 AVSTDDGLLVPFVRDCDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIFGS 345
Query: 372 KFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNE 431
P++N + AI+ M I P D + P+M + + DHR++DG F
Sbjct: 346 MMSTPIINGNQAAILGMHSIITRPIAVDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKT 405
Query: 432 WKQLIENPELLLLQ 445
K+LIENPE LLL+
Sbjct: 406 IKELIENPEDLLLE 419
>sp|Q8CSL9|ODO2_STAES Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1
Length = 420
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 209/434 (48%), Gaps = 26/434 (5%)
Query: 23 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 82
+ +V + + E I E + +W GD +++ + + +++DK +E+ S G +++ L
Sbjct: 1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 83 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESV-------KPPGSENSPDSKLNKDTVGG 135
G+ V+VG+ + VVG+ V T + ES K +++P+S +++T
Sbjct: 61 EEGDTVEVGQAVA--VVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDN 118
Query: 136 ----VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSAD 191
+ ATP+ R A+ G++L +V G D VL++D ++ + QK ++ + S S +
Sbjct: 119 SQQRINATPSARRHARKNGVDLSEVSGKGND--VLRKDDVENS-QKSSSQTAKSESKSQN 175
Query: 192 CREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDA 251
+ + P K KT + +++ + A + F+ V+ N
Sbjct: 176 SGSKQSNNNPSKP--VIREKMSRRKKTAA-----KKLLEVSNQTAMLTTFNEVDMTNVMD 228
Query: 252 LVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGI 311
L K K + D K F+ K+ A+ KYP +N+ + + + I K ++IGI
Sbjct: 229 LRKRKKEQFIKDHD-GTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDM--ITKQFYDIGI 285
Query: 312 AMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGG 371
A++T GL VP +++ + EI +E++ L A+D +L D G+ T++N G G
Sbjct: 286 AVSTDDGLLVPFVRDCDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIFGS 345
Query: 372 KFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNE 431
P++N + AI+ M I P D + P+M + + DHR++DG F
Sbjct: 346 MMSTPIINGNQAAILGMHSIITRPIAVDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKT 405
Query: 432 WKQLIENPELLLLQ 445
K+LIENPE LLL+
Sbjct: 406 IKELIENPEDLLLE 419
>sp|Q8NWR7|ODO2_STAAW Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MW2) GN=odhB PE=3 SV=1
Length = 422
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 206/439 (46%), Gaps = 38/439 (8%)
Query: 25 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 84
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 85 GNIVKVGETLLKLVVG-------DSAVPTPS-SDVLESVKPPGSENSPD----SKLNKDT 132
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 133 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 192
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 193 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRT------MVKTMSMAAKIPHFHYVEE 246
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 178 -----KEEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 247 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGS 306
N L K K + D K F+ K+ A+ KYP +N+ + + + I K
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNAEIDGDDM--ITKQY 282
Query: 307 HNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNI 366
++IG+A++T GL VP +++ + EI E++ L A++ +L D G+ T++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 367 GAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVA 426
G G P++N + AI+ M I P D + P+M + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 427 KFCNEWKQLIENPELLLLQ 445
F K+LIENPE LLL+
Sbjct: 403 GFLKTIKELIENPEDLLLE 421
>sp|Q6G9E9|ODO2_STAAS Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MSSA476) GN=odhB PE=3 SV=1
Length = 422
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 206/439 (46%), Gaps = 38/439 (8%)
Query: 25 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 84
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 85 GNIVKVGETLLKLVVG-------DSAVPTPS-SDVLESVKPPGSENSPD----SKLNKDT 132
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 133 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 192
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 193 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRT------MVKTMSMAAKIPHFHYVEE 246
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 178 -----KEEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 247 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGS 306
N L K K + D K F+ K+ A+ KYP +N+ + + + I K
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNAEIDGDDM--ITKQY 282
Query: 307 HNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNI 366
++IG+A++T GL VP +++ + EI E++ L A++ +L D G+ T++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 367 GAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVA 426
G G P++N + AI+ M I P D + P+M + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 427 KFCNEWKQLIENPELLLLQ 445
F K+LIENPE LLL+
Sbjct: 403 GFLKTIKELIENPEDLLLE 421
>sp|Q5HG07|ODO2_STAAC Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain COL) GN=odhB PE=3 SV=1
Length = 422
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 206/439 (46%), Gaps = 38/439 (8%)
Query: 25 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 84
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 85 GNIVKVGETLLKLVVG-------DSAVPTPS-SDVLESVKPPGSENSPD----SKLNKDT 132
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 133 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 192
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 193 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRT------MVKTMSMAAKIPHFHYVEE 246
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 178 -----KEEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 247 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGS 306
N L K K + D K F+ K+ A+ KYP +N+ + + + I K
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNAEIDGDDM--ITKQY 282
Query: 307 HNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNI 366
++IG+A++T GL VP +++ + EI E++ L A++ +L D G+ T++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 367 GAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVA 426
G G P++N + AI+ M I P D + P+M + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 427 KFCNEWKQLIENPELLLLQ 445
F K+LIENPE LLL+
Sbjct: 403 GFLKTIKELIENPEDLLLE 421
>sp|Q2FYM2|ODO2_STAA8 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain NCTC 8325) GN=odhB PE=3 SV=1
Length = 422
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 206/439 (46%), Gaps = 38/439 (8%)
Query: 25 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 84
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 85 GNIVKVGETLLKLVVG-------DSAVPTPS-SDVLESVKPPGSENSPD----SKLNKDT 132
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 133 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 192
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 193 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRT------MVKTMSMAAKIPHFHYVEE 246
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 178 -----KEEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 247 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGS 306
N L K K + D K F+ K+ A+ KYP +N+ + + + I K
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNAEIDGDDM--ITKQY 282
Query: 307 HNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNI 366
++IG+A++T GL VP +++ + EI E++ L A++ +L D G+ T++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 367 GAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVA 426
G G P++N + AI+ M I P D + P+M + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 427 KFCNEWKQLIENPELLLLQ 445
F K+LIENPE LLL+
Sbjct: 403 GFLKTIKELIENPEDLLLE 421
>sp|Q2FH26|ODO2_STAA3 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain USA300) GN=odhB PE=3 SV=1
Length = 422
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 206/439 (46%), Gaps = 38/439 (8%)
Query: 25 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 84
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 85 GNIVKVGETLLKLVVG-------DSAVPTPS-SDVLESVKPPGSENSPD----SKLNKDT 132
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 133 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 192
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 193 REQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRT------MVKTMSMAAKIPHFHYVEE 246
EE+ Y Q YP + + +R +++ + A + F+ V+
Sbjct: 178 -----KEEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM 225
Query: 247 INCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGS 306
N L K K + D K F+ K+ A+ KYP +N+ + + + I K
Sbjct: 226 TNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNAEIDGDDM--ITKQY 282
Query: 307 HNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNI 366
++IG+A++T GL VP +++ + EI E++ L A++ +L D G+ T++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 367 GAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVA 426
G G P++N + AI+ M I P D + P+M + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 427 KFCNEWKQLIENPELLLLQ 445
F K+LIENPE LLL+
Sbjct: 403 GFLKTIKELIENPEDLLLE 421
>sp|Q6GGZ6|ODO2_STAAR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MRSA252) GN=odhB PE=3 SV=1
Length = 423
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 204/442 (46%), Gaps = 43/442 (9%)
Query: 25 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 84
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 85 GNIVKVGETLLKLVVGDSA-----------VPTPSSDVLESVKPPGSENSPD----SKLN 129
G+ V+VG+ + V+G+ + P + + + K + S D ++ N
Sbjct: 63 GDTVEVGQAIA--VIGEGSGNASKENSNDNTPQQNDETTNNKKEETTNKSADKAEVNQTN 120
Query: 130 KDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVS 189
D V ATP+ R A+ G+NL +V D V KED+ K Q+ A +T
Sbjct: 121 DDNQQRVNATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQAP 177
Query: 190 ADCREQLLGEEETYPQTFAEVKWYPDDKTVPLRGFQRT------MVKTMSMAAKIPHFHY 243
A EE+ Y Q YP + + +R +++ + A + F+
Sbjct: 178 A-------KEEKKYNQ-------YPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNE 223
Query: 244 VEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVIL 303
V+ N L K K + D K F+ K+ A+ KYP +N+ + + + I
Sbjct: 224 VDMTNVMELRKRKKEQFMKDHD-GTKLGFMSFFTKASVAALKKYPEVNAEIDGDDM--IT 280
Query: 304 KGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITL 363
K ++IG+A++T GL VP +++ + EI E++ L A++ +L D G+ T+
Sbjct: 281 KQYYDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTI 340
Query: 364 SNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGA 423
+N G G P++N + AI+ M I P D + P+M + + DHR++DG
Sbjct: 341 TNGGIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGK 400
Query: 424 TVAKFCNEWKQLIENPELLLLQ 445
F K+LIENPE LLL+
Sbjct: 401 EAVGFLKTIKELIENPEDLLLE 422
>sp|Q68XI8|ODO2_RICTY Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucB PE=3 SV=1
Length = 398
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 208/424 (49%), Gaps = 29/424 (6%)
Query: 24 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA 83
+ + + GE + E + KW+ K GD ++ + L +++DK T+E+ + G + ++
Sbjct: 3 IKIIIPSLGESVTEATIAKWYKKLGDAVKTDELLLEIETDKVTLEVNAPCNGTIGKISKT 62
Query: 84 PGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVR 143
G V VGE + ++ + + + + + K S+++ + ++K + + P+V+
Sbjct: 63 DGANVTVGEEVGEI----NEIADTDTAWINNKKQEVSQHTSEQLVDKPAMASNILAPSVQ 118
Query: 144 NLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLLGEEETY 203
L ++ ++ TG+ GR+ K DVL+ P T A + EE T
Sbjct: 119 KLVTENKLDPNNIKGTGRGGRITKYDVLETI-----NTTPITIETHAINKTN---EERTQ 170
Query: 204 PQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNN- 262
+ ++ KT+ R + + + AA + F+ EI+ ++ L+ ++
Sbjct: 171 RVRMSRLR-----KTIAQR-----LKDSQNTAAILTTFN---EIDMSKVIALRNQYKEEF 217
Query: 263 NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVP 322
+K F+ +K+ A+ P +N+ + + L + K ++IG+A+ T+ GL VP
Sbjct: 218 EKKHTVKLGFMSFFVKATIEALKLIPSINAEIDGDDL--LYKNYYDIGVAVGTEQGLVVP 275
Query: 323 NIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPE 382
I++ +S +I + + L + A++ +L+ +D SGGT ++SN G G P++N P+
Sbjct: 276 VIRDADKMSFADIEQAIGNLAKKAREGKLSISDLSGGTFSISNGGVYGSLLSTPIINPPQ 335
Query: 383 VAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELL 442
I+ + + E+ + DG + P+M + + DHR++DG F + K LIENPE L
Sbjct: 336 SGILGLHKTEERAVVI-DGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKNLIENPEKL 394
Query: 443 LLQM 446
LL +
Sbjct: 395 LLNL 398
>sp|Q89AQ9|ODP2_BUCBP Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=aceF PE=3 SV=1
Length = 410
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 205/434 (47%), Gaps = 51/434 (11%)
Query: 34 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 93
G E+++ VK GD++++ L V+ KA+IEI + + G + + IV +GE
Sbjct: 5 GTDLVEVIEILVKIGDQVKKDDSLITVEGQKASIEIPASHTGTIKNI------IVHIGE- 57
Query: 94 LLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGG----------------VL 137
K+ G D ++VK +S K +K+T V
Sbjct: 58 --KITTGSLIAILNGID--DNVKSKNDSSSYSFKNSKNTSTNSNLGNVNNNINNRTILVH 113
Query: 138 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLL 197
ATPTVR LA+ + I L ++ TG+ GR+LKEDV+ Y S+ D ++ L
Sbjct: 114 ATPTVRRLARKFDIKLENITGTGRKGRILKEDVISY----------KNISLFNDIKKSL- 162
Query: 198 GEEETYPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK----IPHFHYVEEINCDALV 253
++T + + D K++ L RT +++ K IPH +E + L
Sbjct: 163 --KKTNVNYYKDNVTCDDFKSIEL---TRTQIRSSKNLLKSWLTIPHVTQFDESDITELE 217
Query: 254 KLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYP-FMNSCFNEESLEVILKGSH-NIGI 311
+ + ++ D + K T L +IK++S A+ +P F N+++ I+ H NIGI
Sbjct: 218 NFRQKYNSDLKDKSKKLTILIFVIKAVSKALEMFPKFNGRLINKDNRIAIVLNEHINIGI 277
Query: 312 AMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPAD-NSGGTITLSNIGAIG 370
+ T GL VP I V +I I+ +L + + A+ +LN +D G+ T+SN+G IG
Sbjct: 278 VVDTDDGLLVPVINRVNKKNISSISNDLRIISERARSRKLNFSDIKEYGSFTISNLGGIG 337
Query: 371 GKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCN 430
G P++ PE+AI+ + R P + + P ++ +++ DHR +DG +F
Sbjct: 338 GTNFTPIIKYPELAILGISRALIKPYWNSHAFI-PKLMLPLSLSYDHRAIDGVAAVRFIT 396
Query: 431 EWKQLIENPELLLL 444
K+++ + L++
Sbjct: 397 FVKKMLTDIRFLMI 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,077,656
Number of Sequences: 539616
Number of extensions: 7150854
Number of successful extensions: 15868
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 15412
Number of HSP's gapped (non-prelim): 200
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)