Query 013220
Match_columns 447
No_of_seqs 143 out of 1290
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 01:37:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013220.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013220hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1290 Serine/threonine prote 100.0 1.8E-67 4E-72 515.8 33.7 420 1-420 43-558 (590)
2 KOG0667 Dual-specificity tyros 100.0 3.3E-51 7.1E-56 416.6 24.9 313 25-419 176-509 (586)
3 KOG0615 Serine/threonine prote 100.0 1E-51 2.2E-56 398.4 17.3 257 36-421 172-446 (475)
4 KOG0581 Mitogen-activated prot 100.0 2.5E-49 5.5E-54 379.1 19.2 259 36-419 79-342 (364)
5 KOG0661 MAPK related serine/th 100.0 6.3E-50 1.4E-54 392.0 14.8 287 35-426 9-305 (538)
6 KOG0575 Polo-like serine/threo 100.0 1.8E-48 3.9E-53 392.8 20.7 249 36-417 18-274 (592)
7 KOG0659 Cdk activating kinase 100.0 1.2E-47 2.7E-52 351.8 19.6 285 36-424 2-293 (318)
8 KOG0593 Predicted protein kina 100.0 5.3E-48 1.1E-52 359.7 17.3 283 36-419 2-291 (396)
9 KOG0663 Protein kinase PITSLRE 100.0 2.6E-47 5.5E-52 359.3 17.2 284 36-418 76-367 (419)
10 KOG0660 Mitogen-activated prot 100.0 4.8E-47 1E-51 362.1 17.5 295 35-429 21-327 (359)
11 KOG0598 Ribosomal protein S6 k 100.0 1.4E-46 3.1E-51 360.1 19.3 264 31-427 20-296 (357)
12 KOG0592 3-phosphoinositide-dep 100.0 2E-46 4.3E-51 372.6 20.1 253 35-419 72-345 (604)
13 PTZ00284 protein kinase; Provi 100.0 4E-45 8.7E-50 380.8 28.3 330 20-418 111-444 (467)
14 KOG0600 Cdc2-related protein k 100.0 4.4E-46 9.6E-51 367.4 17.5 281 36-417 117-405 (560)
15 KOG0583 Serine/threonine prote 100.0 1.8E-45 3.9E-50 369.4 21.3 251 35-417 16-280 (370)
16 KOG0578 p21-activated serine/t 100.0 9.6E-46 2.1E-50 370.3 17.0 255 30-417 269-528 (550)
17 KOG0595 Serine/threonine-prote 100.0 6E-45 1.3E-49 352.0 21.6 260 36-419 10-275 (429)
18 KOG0658 Glycogen synthase kina 100.0 1.5E-45 3.3E-50 352.4 15.4 287 37-423 25-317 (364)
19 KOG0694 Serine/threonine prote 100.0 9.4E-45 2E-49 369.8 20.0 262 25-419 356-631 (694)
20 KOG0616 cAMP-dependent protein 100.0 1E-44 2.2E-49 337.1 18.1 257 30-419 38-304 (355)
21 KOG0033 Ca2+/calmodulin-depend 100.0 1.5E-46 3.3E-51 340.8 5.6 255 35-419 10-274 (355)
22 KOG0582 Ste20-like serine/thre 100.0 7E-44 1.5E-48 347.2 23.0 268 33-421 23-302 (516)
23 KOG0588 Serine/threonine prote 100.0 1.8E-44 4E-49 365.2 17.3 251 36-419 12-270 (786)
24 cd07876 STKc_JNK2 Catalytic do 100.0 3.4E-43 7.3E-48 353.9 25.6 307 21-422 4-325 (359)
25 cd05612 STKc_PRKX_like Catalyt 100.0 2.2E-43 4.8E-48 345.0 21.6 253 36-421 1-263 (291)
26 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.8E-43 1.7E-47 340.5 24.4 278 36-415 5-288 (288)
27 KOG0671 LAMMER dual specificit 100.0 7.9E-44 1.7E-48 341.3 16.8 330 23-418 77-412 (415)
28 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-42 2.4E-47 338.3 24.5 280 36-415 1-287 (287)
29 KOG0594 Protein kinase PCTAIRE 100.0 2.1E-43 4.5E-48 337.9 18.9 286 36-421 11-311 (323)
30 KOG0585 Ca2+/calmodulin-depend 100.0 1.3E-43 2.8E-48 347.4 16.5 251 36-418 97-378 (576)
31 cd07874 STKc_JNK3 Catalytic do 100.0 1.7E-42 3.7E-47 348.2 24.6 307 23-419 2-318 (355)
32 PTZ00263 protein kinase A cata 100.0 4.8E-43 1E-47 348.8 20.4 250 36-418 18-277 (329)
33 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.8E-42 8.2E-47 342.4 26.6 284 37-420 1-298 (338)
34 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-42 4.3E-47 339.9 23.5 285 36-419 5-295 (303)
35 KOG0605 NDR and related serine 100.0 4.5E-43 9.8E-48 348.8 18.1 257 34-422 139-455 (550)
36 cd07875 STKc_JNK1 Catalytic do 100.0 7.6E-42 1.7E-46 344.7 26.7 306 21-421 7-327 (364)
37 KOG0670 U4/U6-associated splic 100.0 1.8E-43 3.9E-48 348.7 14.3 314 21-417 418-751 (752)
38 KOG0198 MEKK and related serin 100.0 6.8E-43 1.5E-47 339.1 17.7 258 36-420 17-284 (313)
39 PHA03212 serine/threonine kina 100.0 6E-42 1.3E-46 348.9 24.4 285 36-418 92-382 (391)
40 KOG0597 Serine-threonine prote 100.0 8E-43 1.7E-47 347.2 17.2 251 36-419 2-258 (808)
41 cd07862 STKc_CDK6 Catalytic do 100.0 9.9E-42 2.2E-46 332.1 24.3 282 36-415 1-290 (290)
42 cd07863 STKc_CDK4 Catalytic do 100.0 1.8E-41 4E-46 329.7 25.0 281 37-415 1-288 (288)
43 cd05631 STKc_GRK4 Catalytic do 100.0 1.3E-41 2.8E-46 331.4 23.7 256 38-420 2-269 (285)
44 PTZ00036 glycogen synthase kin 100.0 1.6E-41 3.4E-46 350.9 25.7 286 35-420 65-359 (440)
45 KOG0591 NIMA (never in mitosis 100.0 1.9E-43 4.1E-48 326.4 9.7 253 36-421 19-285 (375)
46 KOG0032 Ca2+/calmodulin-depend 100.0 7.3E-42 1.6E-46 343.5 22.0 258 36-418 35-299 (382)
47 cd05571 STKc_PKB Catalytic dom 100.0 2.8E-42 6.1E-47 342.3 18.8 245 42-419 1-258 (323)
48 cd07850 STKc_JNK Catalytic dom 100.0 2.8E-41 6E-46 339.2 25.0 302 23-419 1-318 (353)
49 PTZ00426 cAMP-dependent protei 100.0 8.5E-42 1.9E-46 341.5 20.2 251 36-419 30-291 (340)
50 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.4E-41 9.5E-46 336.2 24.9 285 36-421 15-307 (343)
51 KOG4717 Serine/threonine prote 100.0 6.1E-42 1.3E-46 337.4 18.0 253 36-419 18-277 (864)
52 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.8E-41 6.1E-46 336.4 22.9 259 36-419 1-264 (333)
53 KOG0610 Putative serine/threon 100.0 9.9E-42 2.1E-46 329.8 17.7 300 31-419 72-399 (459)
54 cd05585 STKc_YPK1_like Catalyt 100.0 2E-41 4.3E-46 334.6 20.2 243 44-419 1-254 (312)
55 cd07868 STKc_CDK8 Catalytic do 100.0 1.2E-40 2.6E-45 328.9 25.0 293 41-415 6-317 (317)
56 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-40 2.4E-45 328.4 24.0 283 36-420 6-294 (309)
57 KOG0599 Phosphorylase kinase g 100.0 2.2E-42 4.7E-47 318.0 11.0 255 36-418 17-289 (411)
58 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.8E-41 1.3E-45 335.8 21.8 254 36-419 1-292 (350)
59 KOG0604 MAP kinase-activated p 100.0 8.9E-42 1.9E-46 317.6 14.5 261 36-419 61-329 (400)
60 cd05587 STKc_cPKC Catalytic do 100.0 8.4E-41 1.8E-45 331.8 21.5 251 37-419 1-264 (324)
61 cd05589 STKc_PKN Catalytic dom 100.0 7E-41 1.5E-45 332.4 20.9 251 38-419 1-264 (324)
62 cd05628 STKc_NDR1 Catalytic do 100.0 2E-40 4.2E-45 334.5 24.1 252 36-419 1-300 (363)
63 cd06649 PKc_MEK2 Catalytic dom 100.0 4.6E-40 1E-44 327.6 26.3 290 35-419 4-308 (331)
64 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-40 4.2E-45 335.5 23.9 284 37-418 1-294 (372)
65 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-40 2.4E-45 336.0 21.7 252 36-419 1-303 (364)
66 cd05593 STKc_PKB_gamma Catalyt 100.0 6.8E-41 1.5E-45 333.3 19.3 244 42-418 1-257 (328)
67 KOG0611 Predicted serine/threo 100.0 9.4E-42 2E-46 328.0 12.3 248 36-417 53-308 (668)
68 cd05590 STKc_nPKC_eta Catalyti 100.0 8.8E-41 1.9E-45 331.3 19.7 246 42-419 1-260 (320)
69 cd05626 STKc_LATS2 Catalytic d 100.0 3.1E-40 6.8E-45 335.2 23.8 254 37-419 2-312 (381)
70 cd05629 STKc_NDR_like_fungal C 100.0 2.2E-40 4.8E-45 335.7 22.4 252 36-419 1-312 (377)
71 PHA03209 serine/threonine kina 100.0 3.1E-40 6.7E-45 332.4 23.2 289 32-417 62-356 (357)
72 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-40 2.4E-45 331.0 19.0 245 42-419 1-258 (323)
73 KOG0580 Serine/threonine prote 100.0 1.4E-41 3E-46 307.8 11.3 252 36-418 22-279 (281)
74 cd05614 STKc_MSK2_N N-terminal 100.0 4.2E-40 9E-45 327.7 23.2 255 37-419 1-274 (332)
75 cd05625 STKc_LATS1 Catalytic d 100.0 3.3E-40 7.1E-45 335.0 22.6 253 37-419 2-312 (382)
76 cd05616 STKc_cPKC_beta Catalyt 100.0 2.7E-40 5.8E-45 328.1 21.4 251 37-419 1-264 (323)
77 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-40 3.6E-45 328.8 19.6 246 42-419 1-255 (316)
78 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-40 3.2E-45 329.6 19.3 245 42-418 1-260 (321)
79 cd05588 STKc_aPKC Catalytic do 100.0 5.4E-40 1.2E-44 326.9 22.7 254 42-418 1-268 (329)
80 cd05570 STKc_PKC Catalytic dom 100.0 3E-40 6.5E-45 327.1 20.1 246 42-419 1-259 (318)
81 cd05596 STKc_ROCK Catalytic do 100.0 7.5E-40 1.6E-44 331.2 23.2 253 35-419 42-311 (370)
82 cd05594 STKc_PKB_alpha Catalyt 100.0 1.2E-40 2.7E-45 330.8 17.0 244 42-418 1-258 (325)
83 cd05598 STKc_LATS Catalytic do 100.0 3.4E-40 7.4E-45 334.1 20.4 253 36-418 1-307 (376)
84 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-39 3.5E-44 316.6 24.4 256 37-419 1-268 (285)
85 cd05592 STKc_nPKC_theta_delta 100.0 3.6E-40 7.8E-45 326.3 20.0 246 42-419 1-255 (316)
86 cd07867 STKc_CDC2L6 Catalytic 100.0 2E-39 4.4E-44 319.9 25.2 293 41-415 6-317 (317)
87 KOG1989 ARK protein kinase fam 100.0 8.6E-40 1.9E-44 342.7 23.6 248 35-412 36-307 (738)
88 cd05618 STKc_aPKC_iota Catalyt 100.0 8.8E-40 1.9E-44 325.4 22.6 254 42-418 1-268 (329)
89 KOG0201 Serine/threonine prote 100.0 5.9E-42 1.3E-46 333.5 6.8 253 33-417 10-268 (467)
90 cd05601 STKc_CRIK Catalytic do 100.0 3.8E-40 8.3E-45 327.7 19.9 254 36-418 1-269 (330)
91 PHA03207 serine/threonine kina 100.0 2E-39 4.3E-44 330.6 25.6 288 30-418 87-381 (392)
92 cd05619 STKc_nPKC_theta Cataly 100.0 4.4E-40 9.5E-45 325.8 20.1 246 42-419 1-255 (316)
93 cd06650 PKc_MEK1 Catalytic dom 100.0 1.8E-39 3.9E-44 323.8 24.5 291 34-419 3-306 (333)
94 PF00069 Pkinase: Protein kina 100.0 2.6E-39 5.6E-44 308.9 24.6 252 38-415 1-260 (260)
95 cd05621 STKc_ROCK2 Catalytic d 100.0 1.2E-39 2.6E-44 329.7 23.5 252 35-418 42-310 (370)
96 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.9E-39 4.2E-44 318.2 23.7 281 36-418 6-292 (301)
97 cd05608 STKc_GRK1 Catalytic do 100.0 2.9E-39 6.3E-44 314.0 23.8 249 44-419 1-264 (280)
98 cd05584 STKc_p70S6K Catalytic 100.0 6.5E-40 1.4E-44 325.4 19.5 244 42-418 2-262 (323)
99 KOG0192 Tyrosine kinase specif 100.0 1.5E-39 3.3E-44 324.3 21.6 245 36-410 41-297 (362)
100 cd07839 STKc_CDK5 Catalytic do 100.0 2.8E-39 6.1E-44 313.6 23.1 277 37-415 1-284 (284)
101 PHA03211 serine/threonine kina 100.0 2.7E-39 5.8E-44 334.7 24.3 297 23-417 156-460 (461)
102 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.8E-39 6E-44 321.5 22.9 253 42-419 1-267 (327)
103 cd07861 STKc_CDK1_euk Catalyti 100.0 4.6E-39 9.9E-44 312.1 23.7 277 37-415 1-285 (285)
104 cd05615 STKc_cPKC_alpha Cataly 100.0 2.1E-39 4.5E-44 321.9 21.8 251 37-419 1-264 (323)
105 cd05630 STKc_GRK6 Catalytic do 100.0 4.1E-39 8.9E-44 313.9 23.4 260 37-423 1-272 (285)
106 cd05627 STKc_NDR2 Catalytic do 100.0 2E-39 4.3E-44 326.7 21.0 251 36-418 1-299 (360)
107 PLN00034 mitogen-activated pro 100.0 1.3E-39 2.7E-44 327.3 19.3 253 36-421 74-337 (353)
108 cd06637 STKc_TNIK Catalytic do 100.0 2.8E-39 6E-44 311.5 20.8 257 35-415 5-272 (272)
109 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-39 2.5E-44 323.5 18.5 245 42-419 1-258 (323)
110 cd05597 STKc_DMPK_like Catalyt 100.0 1E-38 2.2E-43 318.0 23.4 257 36-419 1-273 (331)
111 KOG0666 Cyclin C-dependent kin 100.0 6.2E-40 1.3E-44 306.6 13.3 298 36-418 24-343 (438)
112 cd05632 STKc_GRK5 Catalytic do 100.0 1.7E-38 3.7E-43 309.4 23.9 259 37-422 1-271 (285)
113 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-38 2.4E-43 309.4 22.4 257 35-415 15-282 (282)
114 cd05622 STKc_ROCK1 Catalytic d 100.0 9.5E-39 2.1E-43 323.3 22.5 254 35-418 42-310 (371)
115 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-39 2.9E-44 322.2 16.0 244 42-418 2-260 (318)
116 cd05607 STKc_GRK7 Catalytic do 100.0 2.1E-38 4.5E-43 307.5 23.4 249 44-419 1-261 (277)
117 cd07865 STKc_CDK9 Catalytic do 100.0 4.3E-38 9.3E-43 308.8 25.6 289 29-415 7-310 (310)
118 cd05604 STKc_SGK3 Catalytic do 100.0 3E-39 6.5E-44 320.8 17.3 244 42-418 1-257 (325)
119 cd07855 STKc_ERK5 Catalytic do 100.0 2E-38 4.2E-43 316.1 23.1 291 35-425 4-307 (334)
120 cd05602 STKc_SGK1 Catalytic do 100.0 5.1E-39 1.1E-43 319.2 18.8 244 42-418 1-257 (325)
121 KOG0662 Cyclin-dependent kinas 100.0 2E-39 4.4E-44 282.2 13.8 280 36-419 2-290 (292)
122 cd05580 STKc_PKA Catalytic dom 100.0 2.2E-38 4.7E-43 309.2 22.5 251 36-419 1-261 (290)
123 cd06619 PKc_MKK5 Catalytic dom 100.0 2.6E-38 5.6E-43 306.9 22.9 258 37-422 2-263 (279)
124 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-38 5E-43 311.7 22.8 285 35-419 6-297 (309)
125 PTZ00283 serine/threonine prot 100.0 3E-38 6.5E-43 330.8 25.0 258 35-418 31-303 (496)
126 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-37 2.4E-42 304.1 27.0 284 36-416 1-295 (295)
127 cd07842 STKc_CDK8_like Catalyt 100.0 4.2E-38 9.1E-43 309.9 24.2 297 37-415 1-316 (316)
128 KOG4279 Serine/threonine prote 100.0 2.2E-39 4.8E-44 328.3 15.3 248 43-418 582-838 (1226)
129 cd05603 STKc_SGK2 Catalytic do 100.0 7.2E-39 1.6E-43 317.4 18.6 244 42-418 1-257 (321)
130 cd07844 STKc_PCTAIRE_like Cata 100.0 5.8E-38 1.3E-42 305.7 24.6 281 36-415 5-291 (291)
131 cd05586 STKc_Sck1_like Catalyt 100.0 4.2E-39 9E-44 320.4 16.5 246 44-419 1-260 (330)
132 cd07860 STKc_CDK2_3 Catalytic 100.0 2.8E-38 6.1E-43 306.6 21.8 277 37-415 1-284 (284)
133 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.5E-38 7.6E-43 314.5 22.6 250 35-411 6-329 (338)
134 cd07849 STKc_ERK1_2_like Catal 100.0 6.4E-38 1.4E-42 312.6 24.3 286 35-421 4-301 (336)
135 cd07841 STKc_CDK7 Catalytic do 100.0 9.2E-38 2E-42 305.3 24.9 283 37-423 1-293 (298)
136 PHA03210 serine/threonine kina 100.0 1.8E-38 3.9E-43 333.1 21.3 296 27-419 140-461 (501)
137 cd08227 PK_STRAD_alpha Pseudok 100.0 3.5E-38 7.6E-43 313.3 22.2 289 40-419 2-314 (327)
138 cd07832 STKc_CCRK Catalytic do 100.0 7.1E-38 1.5E-42 303.7 23.7 278 37-416 1-286 (286)
139 KOG0574 STE20-like serine/thre 100.0 8.4E-41 1.8E-45 311.0 3.0 255 36-420 33-291 (502)
140 KOG0579 Ste20-like serine/thre 100.0 6.4E-40 1.4E-44 329.2 9.5 257 35-420 31-297 (1187)
141 cd06608 STKc_myosinIII_like Ca 100.0 5.9E-38 1.3E-42 301.7 22.8 258 35-415 5-275 (275)
142 cd07831 STKc_MOK Catalytic dom 100.0 6.6E-38 1.4E-42 303.3 23.2 277 38-415 1-282 (282)
143 cd05574 STKc_phototropin_like 100.0 4.7E-38 1E-42 310.3 22.6 253 36-419 1-296 (316)
144 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-37 2.9E-42 297.1 24.9 250 37-415 1-257 (257)
145 PLN00009 cyclin-dependent kina 100.0 9E-38 2E-42 305.0 24.1 283 36-419 2-291 (294)
146 cd07833 STKc_CDKL Catalytic do 100.0 1E-37 2.2E-42 302.8 24.3 280 36-415 1-288 (288)
147 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.9E-37 4.1E-42 300.7 26.1 278 36-415 1-286 (286)
148 PTZ00267 NIMA-related protein 100.0 5.6E-38 1.2E-42 327.8 23.9 253 36-418 67-329 (478)
149 PTZ00266 NIMA-related protein 100.0 7.3E-38 1.6E-42 340.7 25.5 281 30-421 8-304 (1021)
150 cd05623 STKc_MRCK_alpha Cataly 100.0 6.2E-38 1.3E-42 312.4 23.1 257 36-419 1-273 (332)
151 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-37 2.5E-42 305.4 24.6 261 27-420 13-278 (296)
152 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-37 4.5E-42 295.3 25.5 249 37-415 1-256 (256)
153 cd07851 STKc_p38 Catalytic dom 100.0 1.7E-37 3.6E-42 310.7 26.0 292 35-425 14-311 (343)
154 cd06625 STKc_MEKK3_like Cataly 100.0 9.5E-38 2.1E-42 299.1 22.9 249 36-415 2-263 (263)
155 KOG0589 Serine/threonine prote 100.0 9.9E-39 2.1E-43 317.9 16.6 252 36-416 4-262 (426)
156 cd05624 STKc_MRCK_beta Catalyt 100.0 5.9E-38 1.3E-42 312.5 22.3 256 36-418 1-272 (331)
157 cd06615 PKc_MEK Catalytic doma 100.0 1.3E-37 2.9E-42 306.6 24.2 284 37-418 2-293 (308)
158 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.3E-37 2.7E-42 303.5 23.7 281 36-415 5-291 (291)
159 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.4E-38 1.6E-42 304.2 22.0 260 36-421 1-271 (286)
160 KOG2345 Serine/threonine prote 100.0 1.6E-38 3.5E-43 289.2 15.9 256 32-412 17-296 (302)
161 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-37 2.3E-42 304.4 22.7 264 30-422 6-279 (292)
162 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-37 3E-42 310.5 23.9 291 36-424 5-303 (337)
163 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.6E-37 5.6E-42 307.5 25.7 296 29-426 2-302 (328)
164 cd06639 STKc_myosinIIIB Cataly 100.0 4.3E-37 9.3E-42 299.8 25.8 264 28-416 16-291 (291)
165 cd07834 STKc_MAPK Catalytic do 100.0 2.3E-37 5E-42 307.3 24.0 290 37-426 1-303 (330)
166 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-37 1E-41 307.5 26.1 289 36-423 15-309 (343)
167 KOG0690 Serine/threonine prote 100.0 3.9E-39 8.5E-44 302.6 10.3 268 36-436 168-448 (516)
168 cd06612 STKc_MST1_2 Catalytic 100.0 2.4E-37 5.3E-42 294.8 22.8 250 36-415 3-256 (256)
169 cd07836 STKc_Pho85 Catalytic d 100.0 4.5E-37 9.8E-42 298.0 24.6 277 37-415 1-284 (284)
170 cd06638 STKc_myosinIIIA Cataly 100.0 3.6E-37 7.7E-42 299.2 23.7 257 36-415 18-286 (286)
171 cd08218 STKc_Nek1 Catalytic do 100.0 4.9E-37 1.1E-41 293.2 24.3 249 37-415 1-256 (256)
172 cd07835 STKc_CDK1_like Catalyt 100.0 2E-37 4.4E-42 300.5 21.9 276 38-415 1-283 (283)
173 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-37 5.4E-42 303.1 22.7 260 28-420 13-277 (297)
174 cd07843 STKc_CDC2L1 Catalytic 100.0 2.6E-37 5.6E-42 301.7 22.4 281 36-415 5-293 (293)
175 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.6E-37 5.7E-42 299.5 22.1 259 36-421 1-270 (283)
176 KOG0586 Serine/threonine prote 100.0 4.7E-38 1E-42 317.7 17.3 253 36-421 56-315 (596)
177 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.7E-37 1E-41 294.4 23.5 255 36-415 1-267 (267)
178 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-36 2.3E-41 305.2 26.9 285 35-420 16-308 (345)
179 KOG0596 Dual specificity; seri 100.0 7.5E-38 1.6E-42 311.5 18.2 256 33-417 358-632 (677)
180 cd07879 STKc_p38delta_MAPK13 C 100.0 7.1E-37 1.5E-41 306.0 25.4 286 36-421 15-306 (342)
181 cd07857 STKc_MPK1 Catalytic do 100.0 6.7E-37 1.5E-41 304.7 25.2 288 37-421 1-301 (332)
182 cd06643 STKc_SLK Catalytic dom 100.0 3.5E-37 7.6E-42 299.1 22.3 257 36-421 5-271 (282)
183 cd06611 STKc_SLK_like Catalyti 100.0 1.7E-37 3.7E-42 300.8 20.0 254 36-418 5-268 (280)
184 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.2E-36 2.6E-41 296.4 26.0 267 36-419 1-273 (287)
185 cd06609 STKc_MST3_like Catalyt 100.0 2.8E-37 6.2E-42 298.2 21.3 253 36-421 1-260 (274)
186 cd06631 STKc_YSK4 Catalytic do 100.0 5.3E-37 1.1E-41 294.7 23.0 248 37-415 1-265 (265)
187 PHA02988 hypothetical protein; 100.0 5.3E-37 1.1E-41 299.0 23.1 242 42-411 26-274 (283)
188 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.1E-37 2E-41 296.1 24.4 278 36-415 1-286 (286)
189 KOG0197 Tyrosine kinases [Sign 100.0 4.8E-38 1E-42 314.1 15.3 243 37-410 207-455 (468)
190 cd06630 STKc_MEKK1 Catalytic d 100.0 7.5E-37 1.6E-41 293.7 23.0 253 37-416 1-268 (268)
191 cd06655 STKc_PAK2 Catalytic do 100.0 8.6E-37 1.9E-41 299.3 23.8 253 36-419 19-276 (296)
192 cd07854 STKc_MAPK4_6 Catalytic 100.0 1E-36 2.2E-41 304.9 24.7 284 35-418 4-306 (342)
193 cd05578 STKc_Yank1 Catalytic d 100.0 8E-37 1.7E-41 292.3 22.7 249 37-415 1-258 (258)
194 cd06651 STKc_MEKK3 Catalytic d 100.0 9.4E-37 2E-41 293.5 23.3 250 37-416 3-265 (266)
195 cd06652 STKc_MEKK2 Catalytic d 100.0 1.6E-36 3.4E-41 291.6 24.9 251 36-416 2-265 (265)
196 cd07866 STKc_BUR1 Catalytic do 100.0 7.1E-37 1.5E-41 300.3 22.8 282 36-415 8-311 (311)
197 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.6E-37 1.2E-41 294.7 21.5 247 37-415 1-267 (267)
198 cd06605 PKc_MAPKK Catalytic do 100.0 3.1E-37 6.8E-42 295.8 19.3 256 36-417 1-262 (265)
199 cd06646 STKc_MAP4K5 Catalytic 100.0 4.9E-37 1.1E-41 295.3 20.5 252 35-414 8-267 (267)
200 cd06645 STKc_MAP4K3 Catalytic 100.0 3E-37 6.5E-42 296.8 18.7 252 35-414 8-267 (267)
201 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-36 2.9E-41 289.7 22.7 250 37-415 1-256 (256)
202 PHA03390 pk1 serine/threonine- 100.0 1.2E-36 2.5E-41 293.8 22.3 248 36-416 14-266 (267)
203 cd07838 STKc_CDK4_6_like Catal 100.0 3.8E-36 8.3E-41 291.4 26.0 280 38-415 1-287 (287)
204 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.6E-37 1.4E-41 297.6 20.5 263 34-418 3-272 (284)
205 cd08217 STKc_Nek2 Catalytic do 100.0 2.6E-36 5.6E-41 288.4 24.2 251 37-415 1-265 (265)
206 cd05118 STKc_CMGC Catalytic do 100.0 1.3E-36 2.8E-41 294.2 22.2 276 38-415 1-283 (283)
207 cd06613 STKc_MAP4K3_like Catal 100.0 3.3E-36 7.1E-41 288.0 24.6 252 36-414 3-262 (262)
208 cd08221 STKc_Nek9 Catalytic do 100.0 3.8E-36 8.3E-41 287.0 24.9 249 37-415 1-256 (256)
209 cd06616 PKc_MKK4 Catalytic dom 100.0 7.6E-37 1.6E-41 297.4 20.2 265 36-423 4-278 (288)
210 KOG0577 Serine/threonine prote 100.0 7.3E-38 1.6E-42 312.8 12.9 268 20-419 6-285 (948)
211 cd05577 STKc_GRK Catalytic dom 100.0 1.7E-36 3.8E-41 293.6 22.3 249 44-419 1-261 (277)
212 cd05633 STKc_GRK3 Catalytic do 100.0 2.1E-36 4.5E-41 293.9 22.7 250 43-419 1-262 (279)
213 cd05096 PTKc_DDR1 Catalytic do 100.0 3E-36 6.4E-41 296.1 24.0 253 35-410 4-299 (304)
214 cd06640 STKc_MST4 Catalytic do 100.0 2.4E-36 5.3E-41 292.6 22.4 253 36-421 4-262 (277)
215 cd07830 STKc_MAK_like Catalyti 100.0 3.5E-36 7.6E-41 291.6 23.4 278 38-415 1-283 (283)
216 cd05581 STKc_PDK1 Catalytic do 100.0 1.5E-36 3.2E-41 293.1 20.7 248 36-415 1-280 (280)
217 cd07840 STKc_CDK9_like Catalyt 100.0 4.3E-36 9.4E-41 290.8 24.0 279 38-415 1-287 (287)
218 cd05609 STKc_MAST Catalytic do 100.0 5.4E-36 1.2E-40 294.5 25.0 252 37-418 2-279 (305)
219 cd07864 STKc_CDK12 Catalytic d 100.0 3.2E-36 7E-41 294.8 23.3 282 36-415 7-302 (302)
220 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-36 2.5E-41 297.8 20.1 254 36-420 22-280 (292)
221 cd05052 PTKc_Abl Catalytic dom 100.0 2.7E-36 5.9E-41 289.8 22.3 246 36-411 6-257 (263)
222 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.4E-36 7.4E-41 290.2 22.6 252 37-415 2-272 (272)
223 KOG4236 Serine/threonine prote 100.0 8.2E-38 1.8E-42 308.9 11.2 252 40-418 568-825 (888)
224 PTZ00024 cyclin-dependent prot 100.0 3.2E-36 7E-41 300.0 22.8 279 36-419 8-320 (335)
225 cd07829 STKc_CDK_like Catalyti 100.0 4.7E-36 1E-40 290.1 22.9 275 38-415 1-282 (282)
226 cd08219 STKc_Nek3 Catalytic do 100.0 5.5E-36 1.2E-40 286.0 23.0 246 37-412 1-252 (255)
227 cd06632 STKc_MEKK1_plant Catal 100.0 4.3E-36 9.2E-41 286.3 22.0 248 37-415 1-258 (258)
228 KOG0607 MAP kinase-interacting 100.0 4.3E-37 9.4E-42 288.4 14.7 268 38-419 79-368 (463)
229 cd05572 STKc_cGK_PKG Catalytic 100.0 2.4E-36 5.1E-41 289.7 20.2 246 44-418 1-258 (262)
230 cd06607 STKc_TAO Catalytic dom 100.0 5.4E-36 1.2E-40 294.8 23.2 254 36-420 15-275 (307)
231 cd06626 STKc_MEKK4 Catalytic d 100.0 8E-36 1.7E-40 285.7 23.7 248 37-415 1-264 (264)
232 cd06647 STKc_PAK_I Catalytic d 100.0 3.6E-36 7.8E-41 294.3 21.3 260 27-419 12-276 (293)
233 cd06624 STKc_ASK Catalytic dom 100.0 1E-35 2.2E-40 286.4 23.9 250 38-415 10-268 (268)
234 cd08225 STKc_Nek5 Catalytic do 100.0 8.2E-36 1.8E-40 284.5 22.9 250 37-415 1-257 (257)
235 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.7E-36 1.2E-40 288.4 21.8 246 35-411 4-260 (266)
236 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-36 5.1E-41 300.3 19.7 285 42-420 4-316 (328)
237 cd05071 PTKc_Src Catalytic dom 100.0 7.8E-36 1.7E-40 286.8 22.7 245 35-411 5-255 (262)
238 cd06917 STKc_NAK1_like Catalyt 100.0 4.6E-36 9.9E-41 290.1 21.2 254 37-420 2-263 (277)
239 cd06623 PKc_MAPKK_plant_like C 100.0 9.9E-36 2.1E-40 284.8 23.2 254 37-419 2-263 (264)
240 cd05611 STKc_Rim15_like Cataly 100.0 6.7E-36 1.4E-40 286.3 21.9 248 42-418 2-257 (260)
241 cd06606 STKc_MAPKKK Catalytic 100.0 1.6E-35 3.6E-40 281.2 24.2 251 37-415 1-260 (260)
242 cd05106 PTKc_CSF-1R Catalytic 100.0 4.1E-36 8.9E-41 304.3 21.2 248 36-411 38-367 (374)
243 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-36 2.5E-41 294.6 16.4 254 36-422 4-263 (277)
244 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-35 3.2E-40 284.8 23.9 250 36-412 2-261 (267)
245 cd07852 STKc_MAPK15 Catalytic 100.0 4E-36 8.6E-41 299.7 20.6 288 36-425 7-308 (337)
246 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.5E-35 3.3E-40 284.8 23.8 250 36-415 2-264 (264)
247 KOG0603 Ribosomal protein S6 k 100.0 6.4E-37 1.4E-41 311.0 14.9 247 35-417 321-568 (612)
248 cd05606 STKc_beta_ARK Catalyti 100.0 1.1E-35 2.3E-40 288.7 22.8 250 43-419 1-262 (278)
249 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-35 3.2E-40 287.1 23.1 251 35-412 5-274 (277)
250 cd05579 STKc_MAST_like Catalyt 100.0 5.8E-36 1.3E-40 286.0 19.9 242 44-418 1-263 (265)
251 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-35 2.6E-40 284.6 22.1 246 35-411 5-256 (261)
252 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-35 3.2E-40 290.0 22.8 261 35-421 14-282 (296)
253 cd05108 PTKc_EGFR Catalytic do 100.0 9E-36 2E-40 294.5 21.5 249 32-412 3-264 (316)
254 cd05104 PTKc_Kit Catalytic dom 100.0 8.5E-36 1.8E-40 302.1 21.8 250 35-412 34-370 (375)
255 cd06641 STKc_MST3 Catalytic do 100.0 1.3E-35 2.7E-40 287.5 21.5 250 37-419 5-260 (277)
256 cd08216 PK_STRAD Pseudokinase 100.0 2.7E-35 5.8E-40 290.3 24.1 278 48-422 12-305 (314)
257 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.4E-35 3E-40 284.3 21.4 245 35-411 5-255 (260)
258 cd05054 PTKc_VEGFR Catalytic d 100.0 7.3E-36 1.6E-40 298.3 20.3 251 35-412 6-329 (337)
259 cd05039 PTKc_Csk_like Catalyti 100.0 2.2E-35 4.8E-40 282.0 22.6 246 34-411 4-251 (256)
260 KOG0669 Cyclin T-dependent kin 100.0 6.7E-38 1.4E-42 285.5 4.9 291 35-418 16-321 (376)
261 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-35 2.6E-40 288.0 21.0 247 36-412 5-279 (283)
262 cd05122 PKc_STE Catalytic doma 100.0 3.7E-35 8.1E-40 277.6 23.8 249 37-414 1-253 (253)
263 cd05061 PTKc_InsR Catalytic do 100.0 3.2E-35 6.9E-40 286.5 23.9 254 35-418 5-286 (288)
264 cd05049 PTKc_Trk Catalytic dom 100.0 8.6E-36 1.9E-40 288.4 19.7 247 35-411 4-276 (280)
265 cd06659 STKc_PAK6 Catalytic do 100.0 8.2E-36 1.8E-40 292.5 19.6 251 37-418 22-277 (297)
266 cd08215 STKc_Nek Catalytic dom 100.0 3.3E-35 7.1E-40 279.4 22.9 249 37-415 1-258 (258)
267 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.1E-35 4.5E-40 283.0 21.6 245 35-411 5-255 (260)
268 cd05069 PTKc_Yes Catalytic dom 100.0 3.9E-35 8.5E-40 281.3 23.3 245 35-411 5-255 (260)
269 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.4E-35 5.1E-40 282.0 21.6 244 36-411 4-253 (256)
270 cd05082 PTKc_Csk Catalytic dom 100.0 2.7E-35 5.8E-40 281.6 21.9 245 35-411 5-251 (256)
271 cd06633 STKc_TAO3 Catalytic do 100.0 3.8E-35 8.2E-40 289.9 23.6 253 36-419 21-280 (313)
272 cd06627 STKc_Cdc7_like Catalyt 100.0 4.8E-35 1E-39 278.2 23.3 247 37-415 1-254 (254)
273 KOG0983 Mitogen-activated prot 100.0 1.8E-36 3.8E-41 279.1 12.8 254 38-417 94-354 (391)
274 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.6E-35 5.5E-40 282.3 21.3 245 36-412 4-254 (256)
275 cd05109 PTKc_HER2 Catalytic do 100.0 4.2E-35 9.1E-40 284.0 22.8 249 31-411 2-263 (279)
276 cd05034 PTKc_Src_like Catalyti 100.0 4.7E-35 1E-39 280.3 22.6 246 35-411 5-256 (261)
277 cd06648 STKc_PAK_II Catalytic 100.0 6.1E-35 1.3E-39 284.4 23.2 252 37-419 20-276 (285)
278 cd05068 PTKc_Frk_like Catalyti 100.0 6E-35 1.3E-39 280.0 22.5 247 34-411 4-256 (261)
279 cd06614 STKc_PAK Catalytic dom 100.0 4.1E-35 8.8E-40 285.1 21.6 255 36-419 19-277 (286)
280 cd05084 PTKc_Fes Catalytic dom 100.0 5.3E-35 1.1E-39 278.7 21.4 239 42-411 1-248 (252)
281 cd05032 PTKc_InsR_like Catalyt 100.0 8.4E-35 1.8E-39 281.0 23.0 247 35-411 5-273 (277)
282 cd05055 PTKc_PDGFR Catalytic d 100.0 7.5E-35 1.6E-39 286.3 22.9 249 35-411 34-296 (302)
283 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.5E-35 1.6E-39 282.9 22.7 258 36-411 3-276 (283)
284 cd08222 STKc_Nek11 Catalytic d 100.0 6.1E-35 1.3E-39 279.6 21.7 248 37-415 1-260 (260)
285 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.8E-34 3.8E-39 276.8 24.9 248 36-411 2-260 (267)
286 KOG4645 MAPKKK (MAP kinase kin 100.0 4.9E-37 1.1E-41 329.8 7.7 257 36-423 1235-1505(1509)
287 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.4E-35 2.9E-40 284.1 16.9 245 36-411 6-256 (261)
288 KOG0986 G protein-coupled rece 100.0 4.4E-36 9.6E-41 292.8 13.6 266 35-427 184-461 (591)
289 cd05088 PTKc_Tie2 Catalytic do 100.0 3.3E-35 7.1E-40 288.9 20.0 248 36-412 7-276 (303)
290 cd08530 STKc_CNK2-like Catalyt 100.0 1.4E-34 3E-39 275.6 23.7 249 37-415 1-256 (256)
291 cd00192 PTKc Catalytic domain 100.0 8.4E-35 1.8E-39 277.2 22.0 241 42-412 1-260 (262)
292 cd05093 PTKc_TrkB Catalytic do 100.0 4.2E-35 9.1E-40 285.7 20.2 248 34-411 3-274 (288)
293 cd05123 STKc_AGC Catalytic dom 100.0 5E-35 1.1E-39 277.9 20.1 239 44-415 1-250 (250)
294 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-34 2.3E-39 281.7 22.9 247 36-412 5-279 (283)
295 cd05576 STKc_RPK118_like Catal 100.0 2.8E-35 6.1E-40 279.0 18.2 228 47-415 4-237 (237)
296 cd05059 PTKc_Tec_like Catalyti 100.0 3.4E-35 7.4E-40 281.1 18.8 245 36-412 4-254 (256)
297 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-34 2.5E-39 282.5 22.8 255 37-419 1-275 (290)
298 cd06634 STKc_TAO2 Catalytic do 100.0 6.7E-35 1.4E-39 287.4 21.3 253 36-420 15-275 (308)
299 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-34 2.6E-39 282.7 22.8 251 33-412 9-287 (293)
300 cd08229 STKc_Nek7 Catalytic do 100.0 9.3E-35 2E-39 279.2 21.5 249 36-411 2-260 (267)
301 cd05062 PTKc_IGF-1R Catalytic 100.0 1.5E-34 3.3E-39 279.8 23.1 248 35-412 5-274 (277)
302 cd05075 PTKc_Axl Catalytic dom 100.0 1.2E-34 2.6E-39 279.2 22.0 248 39-412 2-267 (272)
303 cd06635 STKc_TAO1 Catalytic do 100.0 1.9E-34 4.2E-39 285.2 23.8 255 36-421 25-286 (317)
304 cd05103 PTKc_VEGFR2 Catalytic 100.0 9E-35 2E-39 291.0 21.4 251 35-412 6-335 (343)
305 cd05583 STKc_MSK_N N-terminal 100.0 2.3E-34 4.9E-39 280.2 23.5 255 37-419 1-273 (288)
306 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-34 2.6E-39 283.8 21.7 248 36-412 2-271 (297)
307 PRK13184 pknD serine/threonine 100.0 1.8E-34 3.9E-39 313.0 25.0 249 36-412 2-285 (932)
308 PHA02882 putative serine/threo 100.0 1.4E-34 3E-39 283.3 21.9 263 29-411 6-291 (294)
309 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.4E-34 3.1E-39 295.3 22.8 249 35-411 36-392 (400)
310 KOG0584 Serine/threonine prote 100.0 2E-35 4.4E-40 299.0 16.2 258 35-421 38-305 (632)
311 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-34 2.7E-39 283.5 21.4 249 41-420 25-278 (292)
312 cd05083 PTKc_Chk Catalytic dom 100.0 1.3E-34 2.9E-39 276.5 20.9 245 33-411 3-249 (254)
313 cd05073 PTKc_Hck Catalytic dom 100.0 2.5E-34 5.5E-39 275.7 22.9 245 35-411 5-255 (260)
314 KOG0587 Traf2- and Nck-interac 100.0 3.3E-35 7.2E-40 306.0 17.8 259 36-417 19-287 (953)
315 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.1E-34 4.5E-39 283.5 22.7 248 36-412 18-295 (307)
316 KOG0193 Serine/threonine prote 100.0 2.1E-35 4.6E-40 297.2 15.0 245 36-411 392-648 (678)
317 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-34 3.6E-39 281.9 21.0 247 35-411 4-277 (291)
318 cd05033 PTKc_EphR Catalytic do 100.0 3.6E-34 7.8E-39 275.4 22.8 246 36-412 4-261 (266)
319 cd05035 PTKc_Axl_like Catalyti 100.0 2.5E-34 5.5E-39 276.6 21.8 249 38-412 1-268 (273)
320 cd05111 PTK_HER3 Pseudokinase 100.0 3.2E-34 6.9E-39 278.3 22.4 248 32-411 3-263 (279)
321 KOG4721 Serine/threonine prote 100.0 1.3E-35 2.9E-40 295.6 12.9 234 41-413 129-365 (904)
322 cd05051 PTKc_DDR Catalytic dom 100.0 3E-34 6.5E-39 280.0 22.2 254 35-411 4-292 (296)
323 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.5E-34 1.2E-38 276.7 23.7 262 35-411 3-278 (284)
324 cd05116 PTKc_Syk Catalytic dom 100.0 3.2E-34 7E-39 274.5 21.8 236 43-411 2-250 (257)
325 KOG0696 Serine/threonine prote 100.0 1E-35 2.2E-40 287.1 11.2 271 23-425 336-619 (683)
326 cd05097 PTKc_DDR_like Catalyti 100.0 2.1E-34 4.5E-39 281.7 20.8 253 36-411 5-291 (295)
327 KOG0612 Rho-associated, coiled 100.0 6.1E-36 1.3E-40 317.9 10.4 265 33-429 72-355 (1317)
328 cd05610 STKc_MASTL Catalytic d 100.0 3.8E-34 8.3E-39 309.7 24.5 131 36-179 4-139 (669)
329 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-34 2.4E-39 281.5 18.3 247 36-412 5-279 (283)
330 smart00219 TyrKc Tyrosine kina 100.0 3E-34 6.5E-39 273.3 20.9 244 38-411 1-256 (258)
331 cd05060 PTKc_Syk_like Catalyti 100.0 4.2E-34 9.1E-39 273.5 22.0 237 42-411 1-250 (257)
332 PF07714 Pkinase_Tyr: Protein 100.0 1.6E-34 3.4E-39 277.7 19.0 243 39-411 2-257 (259)
333 cd05112 PTKc_Itk Catalytic dom 100.0 5E-34 1.1E-38 272.5 22.2 245 36-412 4-254 (256)
334 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.3E-34 1.6E-38 280.6 24.1 248 35-411 11-288 (314)
335 cd05092 PTKc_TrkA Catalytic do 100.0 2.9E-34 6.3E-39 278.6 20.8 247 35-411 4-276 (280)
336 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.4E-34 5.1E-39 279.7 20.1 260 37-412 5-279 (284)
337 KOG1187 Serine/threonine prote 100.0 3.1E-34 6.8E-39 287.4 21.2 264 36-411 75-347 (361)
338 cd05095 PTKc_DDR2 Catalytic do 100.0 6.4E-34 1.4E-38 278.4 22.9 254 35-411 4-292 (296)
339 cd05056 PTKc_FAK Catalytic dom 100.0 5.4E-34 1.2E-38 274.8 21.9 246 35-412 5-261 (270)
340 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.2E-34 2E-38 272.7 23.1 245 36-411 5-262 (268)
341 KOG1026 Nerve growth factor re 100.0 4.9E-35 1.1E-39 305.8 14.9 245 36-410 486-756 (774)
342 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.3E-34 9.3E-39 275.0 20.4 244 42-412 1-260 (262)
343 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.6E-34 1.6E-38 278.9 22.2 249 35-412 14-292 (304)
344 cd05040 PTKc_Ack_like Catalyti 100.0 9.5E-34 2.1E-38 270.7 22.0 240 42-411 1-253 (257)
345 cd05047 PTKc_Tie Catalytic dom 100.0 6.7E-34 1.5E-38 274.4 21.1 241 42-411 1-263 (270)
346 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.7E-34 1.4E-38 283.4 21.7 250 35-413 11-290 (334)
347 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-33 2.6E-38 271.1 22.6 237 43-411 2-250 (257)
348 KOG1035 eIF-2alpha kinase GCN2 100.0 7.1E-35 1.5E-39 311.9 15.6 254 37-417 480-876 (1351)
349 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 6E-34 1.3E-38 275.6 20.6 260 36-411 4-278 (284)
350 cd05065 PTKc_EphR_B Catalytic 100.0 8.8E-34 1.9E-38 273.1 21.6 245 36-411 4-263 (269)
351 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-33 2.2E-38 274.3 22.2 249 34-411 4-271 (280)
352 cd05046 PTK_CCK4 Pseudokinase 100.0 8.4E-34 1.8E-38 273.9 21.2 249 35-412 4-272 (275)
353 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.5E-34 1.2E-38 272.2 19.7 242 42-411 1-256 (259)
354 cd05066 PTKc_EphR_A Catalytic 100.0 8.6E-34 1.9E-38 273.1 20.9 246 35-411 3-261 (267)
355 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-33 2.8E-38 274.8 22.3 247 35-411 4-284 (288)
356 KOG0668 Casein kinase II, alph 100.0 4.1E-35 8.8E-40 264.1 10.6 285 36-419 38-329 (338)
357 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.4E-34 1.4E-38 275.7 19.9 243 43-412 2-272 (274)
358 PLN03225 Serine/threonine-prot 100.0 9.2E-34 2E-38 300.2 22.9 278 35-421 131-459 (566)
359 cd05057 PTKc_EGFR_like Catalyt 100.0 1.8E-33 3.8E-38 272.6 22.8 247 33-411 4-263 (279)
360 cd05045 PTKc_RET Catalytic dom 100.0 1.2E-33 2.7E-38 275.4 21.8 245 37-411 1-281 (290)
361 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.7E-33 3.7E-38 287.3 22.6 249 36-412 37-395 (401)
362 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-33 3.5E-38 276.7 21.6 249 32-412 3-264 (303)
363 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.4E-34 5.3E-39 275.7 15.3 245 42-412 1-256 (258)
364 KOG1167 Serine/threonine prote 100.0 5.6E-35 1.2E-39 283.9 10.7 341 36-425 36-394 (418)
365 KOG0665 Jun-N-terminal kinase 100.0 1.1E-34 2.5E-39 272.6 11.8 291 36-418 17-316 (369)
366 cd05041 PTKc_Fes_like Catalyti 100.0 3.5E-33 7.7E-38 265.8 21.6 238 42-411 1-247 (251)
367 cd05085 PTKc_Fer Catalytic dom 100.0 4E-33 8.6E-38 265.3 21.8 238 42-411 1-246 (250)
368 KOG0614 cGMP-dependent protein 100.0 3.7E-35 8.1E-40 289.3 7.8 252 36-418 420-683 (732)
369 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.7E-33 8E-38 269.0 21.5 244 42-411 1-265 (269)
370 cd05044 PTKc_c-ros Catalytic d 100.0 3E-33 6.5E-38 269.0 20.8 244 43-411 2-265 (269)
371 KOG4250 TANK binding protein k 100.0 4.5E-34 9.8E-39 292.5 15.4 206 36-316 13-227 (732)
372 cd05042 PTKc_Aatyk Catalytic d 100.0 3.7E-33 7.9E-38 268.8 20.5 244 42-411 1-265 (269)
373 cd05058 PTKc_Met_Ron Catalytic 100.0 8.4E-33 1.8E-37 264.9 22.0 241 42-412 1-255 (262)
374 KOG1006 Mitogen-activated prot 100.0 4.4E-35 9.6E-40 269.0 5.5 291 4-419 30-334 (361)
375 KOG0664 Nemo-like MAPK-related 100.0 8.4E-35 1.8E-39 267.9 6.6 284 38-419 55-350 (449)
376 cd08528 STKc_Nek10 Catalytic d 100.0 9.5E-33 2.1E-37 265.7 21.3 249 37-412 1-266 (269)
377 KOG0194 Protein tyrosine kinas 100.0 1.8E-33 3.9E-38 285.1 16.9 246 36-411 157-415 (474)
378 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-32 2.7E-37 265.3 21.1 249 38-412 1-268 (273)
379 KOG0608 Warts/lats-like serine 100.0 4.9E-33 1.1E-37 280.1 16.0 268 22-420 616-936 (1034)
380 cd05086 PTKc_Aatyk2 Catalytic 100.0 4E-32 8.6E-37 261.9 21.2 243 43-411 2-264 (268)
381 KOG2052 Activin A type IB rece 100.0 1.5E-32 3.2E-37 268.0 17.3 272 15-409 191-496 (513)
382 KOG0695 Serine/threonine prote 100.0 1E-32 2.3E-37 260.3 15.4 263 34-420 248-524 (593)
383 KOG1027 Serine/threonine prote 100.0 8.3E-34 1.8E-38 294.3 8.1 270 38-438 511-793 (903)
384 KOG1095 Protein tyrosine kinas 100.0 5.9E-32 1.3E-36 291.9 20.7 247 35-411 691-956 (1025)
385 KOG1151 Tousled-like protein k 100.0 2E-33 4.4E-38 273.1 8.0 268 35-427 462-756 (775)
386 PLN03224 probable serine/threo 100.0 1.3E-30 2.8E-35 270.6 23.3 273 34-417 143-505 (507)
387 smart00220 S_TKc Serine/Threon 100.0 1.2E-30 2.5E-35 244.8 20.2 239 48-415 1-244 (244)
388 KOG4278 Protein tyrosine kinas 100.0 6.9E-31 1.5E-35 264.0 16.6 244 37-410 268-517 (1157)
389 KOG1094 Discoidin domain recep 100.0 7.9E-31 1.7E-35 262.5 14.9 252 36-411 538-799 (807)
390 PLN00113 leucine-rich repeat r 100.0 2.4E-30 5.3E-35 292.1 19.5 260 28-412 684-947 (968)
391 KOG3653 Transforming growth fa 100.0 3E-30 6.5E-35 253.6 16.0 197 35-314 209-425 (534)
392 KOG4257 Focal adhesion tyrosin 100.0 2.3E-30 4.9E-35 260.6 14.0 241 38-410 391-643 (974)
393 KOG0199 ACK and related non-re 100.0 1.3E-30 2.7E-35 265.4 11.7 255 32-417 106-373 (1039)
394 KOG0576 Mitogen-activated prot 100.0 4.3E-31 9.3E-36 268.1 5.7 261 36-424 15-283 (829)
395 KOG0196 Tyrosine kinase, EPH ( 100.0 3.1E-30 6.7E-35 265.6 11.4 246 36-412 629-887 (996)
396 KOG0984 Mitogen-activated prot 100.0 1E-29 2.2E-34 226.1 13.2 201 36-317 46-256 (282)
397 KOG1152 Signal transduction se 100.0 1E-29 2.3E-34 254.3 12.1 198 36-315 561-771 (772)
398 KOG1345 Serine/threonine kinas 100.0 1.2E-28 2.5E-33 227.4 7.6 263 35-419 23-294 (378)
399 cd00180 PKc Catalytic domain o 99.9 2E-26 4.3E-31 210.4 21.3 208 44-413 1-215 (215)
400 KOG0200 Fibroblast/platelet-de 99.9 5.8E-27 1.3E-31 250.6 19.6 247 37-411 297-574 (609)
401 KOG1025 Epidermal growth facto 99.9 2.4E-27 5.2E-32 245.2 13.8 244 35-410 695-951 (1177)
402 PLN00181 protein SPA1-RELATED; 99.9 1.7E-26 3.8E-31 255.2 13.0 217 98-418 33-271 (793)
403 smart00221 STYKc Protein kinas 99.9 6.5E-25 1.4E-29 204.1 18.7 194 38-315 1-202 (225)
404 smart00750 KIND kinase non-cat 99.9 8.4E-25 1.8E-29 197.3 13.7 169 126-418 1-171 (176)
405 KOG0590 Checkpoint kinase and 99.9 1.9E-25 4.2E-30 236.6 7.5 270 36-425 317-598 (601)
406 KOG1163 Casein kinase (serine/ 99.9 7.3E-24 1.6E-28 192.8 16.5 207 30-317 9-225 (341)
407 KOG1024 Receptor-like protein 99.9 1.6E-24 3.5E-29 208.7 10.4 246 35-411 283-550 (563)
408 KOG1165 Casein kinase (serine/ 99.9 2.4E-23 5.2E-28 197.2 14.7 203 35-316 27-239 (449)
409 KOG1164 Casein kinase (serine/ 99.9 3.5E-22 7.6E-27 198.4 22.4 207 37-316 19-240 (322)
410 COG0515 SPS1 Serine/threonine 99.9 8.7E-21 1.9E-25 183.3 23.8 265 38-425 2-288 (384)
411 PRK09188 serine/threonine prot 99.9 4.5E-21 9.7E-26 191.7 14.5 119 35-177 17-145 (365)
412 PF14531 Kinase-like: Kinase-l 99.8 2E-19 4.3E-24 173.0 16.4 208 37-317 13-254 (288)
413 KOG1166 Mitotic checkpoint ser 99.8 4.4E-20 9.6E-25 200.2 12.2 201 33-311 695-901 (974)
414 KOG1240 Protein kinase contain 99.8 9.7E-21 2.1E-25 202.1 7.0 244 37-412 24-291 (1431)
415 KOG0603 Ribosomal protein S6 k 99.8 3.9E-21 8.4E-26 196.2 2.9 239 44-421 2-252 (612)
416 PRK10359 lipopolysaccharide co 99.8 8.3E-20 1.8E-24 170.7 11.5 131 28-178 24-169 (232)
417 KOG0195 Integrin-linked kinase 99.8 4.4E-20 9.5E-25 170.8 6.8 243 36-410 190-440 (448)
418 cd05147 RIO1_euk RIO kinase fa 99.8 2.8E-19 6.1E-24 164.1 9.6 121 41-177 2-151 (190)
419 cd05145 RIO1_like RIO kinase f 99.8 2.5E-18 5.5E-23 157.8 12.0 121 41-177 2-151 (190)
420 KOG0606 Microtubule-associated 99.8 8.6E-19 1.9E-23 187.2 9.5 221 36-421 83-324 (1205)
421 KOG4158 BRPK/PTEN-induced prot 99.8 8.7E-18 1.9E-22 162.9 14.1 195 94-407 272-505 (598)
422 PRK10345 hypothetical protein; 99.7 3.8E-17 8.1E-22 151.8 14.1 129 41-179 7-140 (210)
423 PRK12274 serine/threonine prot 99.7 1.1E-16 2.4E-21 146.9 15.0 182 39-317 5-211 (218)
424 smart00090 RIO RIO-like kinase 99.7 1.3E-16 2.9E-21 151.3 10.7 132 31-177 22-182 (237)
425 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.8E-16 3.9E-21 159.4 8.9 174 116-416 330-516 (516)
426 cd05144 RIO2_C RIO kinase fami 99.6 2.1E-15 4.6E-20 139.1 10.4 132 24-177 2-158 (198)
427 PRK14879 serine/threonine prot 99.6 1.8E-14 3.9E-19 133.9 12.9 117 42-177 2-128 (211)
428 TIGR03724 arch_bud32 Kae1-asso 99.6 3.4E-14 7.3E-19 130.9 12.8 113 43-177 1-123 (199)
429 KOG1023 Natriuretic peptide re 99.5 2.6E-14 5.7E-19 146.1 10.1 200 96-410 5-218 (484)
430 PRK09605 bifunctional UGMP fam 99.5 7.7E-14 1.7E-18 148.0 13.4 121 36-177 333-461 (535)
431 cd05119 RIO RIO kinase family, 99.5 8.4E-14 1.8E-18 126.8 10.7 119 41-177 2-148 (187)
432 KOG0590 Checkpoint kinase and 99.5 1.6E-15 3.4E-20 161.3 -1.9 257 36-417 20-291 (601)
433 PRK01723 3-deoxy-D-manno-octul 99.4 3.1E-12 6.8E-17 121.6 13.8 122 43-178 38-176 (239)
434 cd05120 APH_ChoK_like Aminogly 99.4 1.5E-12 3.2E-17 112.8 10.7 118 40-177 2-122 (155)
435 KOG0601 Cyclin-dependent kinas 99.3 7.1E-13 1.5E-17 135.8 5.5 253 36-418 114-385 (524)
436 KOG1266 Protein kinase [Signal 99.2 1.8E-11 4E-16 116.9 8.5 204 96-422 125-341 (458)
437 PRK04750 ubiB putative ubiquin 99.2 2.1E-10 4.5E-15 120.2 13.9 129 36-179 120-295 (537)
438 KOG0606 Microtubule-associated 99.2 1.3E-11 2.8E-16 133.0 4.4 320 9-427 776-1107(1205)
439 KOG0601 Cyclin-dependent kinas 99.2 4E-11 8.6E-16 123.1 7.2 247 36-416 265-518 (524)
440 TIGR01982 UbiB 2-polyprenylphe 99.1 4E-10 8.7E-15 116.3 12.5 124 41-177 122-290 (437)
441 cd05151 ChoK Choline Kinase (C 99.1 1.9E-10 4.2E-15 102.7 8.7 113 41-177 3-121 (170)
442 cd05146 RIO3_euk RIO kinase fa 99.1 8.4E-10 1.8E-14 101.2 11.0 121 42-178 3-159 (197)
443 KOG1243 Protein kinase [Genera 99.0 4.9E-09 1.1E-13 109.1 14.0 182 38-310 15-200 (690)
444 KOG3087 Serine/threonine prote 98.9 3.2E-08 6.9E-13 88.2 12.5 127 40-179 11-148 (229)
445 KOG2137 Protein kinase [Signal 98.8 1.7E-09 3.7E-14 112.9 0.9 154 152-421 108-274 (700)
446 cd05154 ACAD10_11_like Acyl-Co 98.7 5.9E-08 1.3E-12 90.2 10.0 111 42-161 4-117 (223)
447 COG3642 Mn2+-dependent serine/ 98.6 4.2E-07 9.1E-12 81.4 11.2 115 43-179 3-127 (204)
448 PF01163 RIO1: RIO1 family; I 98.6 4E-07 8.6E-12 83.1 9.8 111 51-178 1-141 (188)
449 PRK15123 lipopolysaccharide co 98.5 1.6E-06 3.4E-11 83.8 13.6 96 78-178 74-172 (268)
450 KOG3741 Poly(A) ribonuclease s 98.4 6E-06 1.3E-10 84.1 15.6 123 48-177 288-426 (655)
451 COG4248 Uncharacterized protei 98.4 1.2E-05 2.7E-10 80.0 15.3 194 40-317 15-226 (637)
452 COG0478 RIO-like serine/threon 98.3 4.6E-06 1E-10 79.1 10.6 120 38-178 93-236 (304)
453 PRK09902 hypothetical protein; 98.3 1.7E-05 3.8E-10 73.2 13.8 127 45-178 27-162 (216)
454 PF06293 Kdo: Lipopolysacchari 98.2 1.3E-05 2.9E-10 74.4 10.8 96 77-179 56-153 (206)
455 COG1718 RIO1 Serine/threonine 98.2 2.6E-05 5.6E-10 73.3 12.0 122 41-178 53-201 (268)
456 PF06176 WaaY: Lipopolysacchar 98.0 4.8E-05 1E-09 70.6 10.8 135 28-178 23-169 (229)
457 PF01636 APH: Phosphotransfera 97.9 0.00033 7.3E-09 65.1 14.2 82 41-130 2-84 (239)
458 KOG1235 Predicted unusual prot 97.9 0.00013 2.9E-09 76.3 12.0 128 41-179 166-336 (538)
459 COG0661 AarF Predicted unusual 97.8 0.00012 2.5E-09 76.9 11.1 126 42-177 131-298 (517)
460 TIGR02172 Fb_sc_TIGR02172 Fibr 97.7 0.00053 1.1E-08 64.6 12.8 72 42-126 7-78 (226)
461 PF13095 FTA2: Kinetochore Sim 97.7 0.00048 1E-08 63.3 11.5 121 36-176 37-196 (207)
462 KOG0576 Mitogen-activated prot 97.7 6.3E-06 1.4E-10 85.9 -0.9 198 21-314 229-431 (829)
463 KOG1035 eIF-2alpha kinase GCN2 97.6 0.00023 5.1E-09 79.0 10.0 207 78-419 228-441 (1351)
464 COG2112 Predicted Ser/Thr prot 97.4 0.00074 1.6E-08 60.4 8.7 113 39-177 25-139 (201)
465 cd05150 APH Aminoglycoside 3'- 97.3 0.0023 5E-08 60.7 10.9 74 43-129 5-80 (244)
466 PLN02876 acyl-CoA dehydrogenas 97.3 0.0026 5.7E-08 71.2 12.6 83 40-126 42-128 (822)
467 cd05155 APH_ChoK_like_1 Unchar 97.1 0.0047 1E-07 58.3 11.2 77 42-128 3-81 (235)
468 KOG2270 Serine/threonine prote 97.1 0.0035 7.6E-08 62.3 10.4 130 32-177 139-298 (520)
469 PF10707 YrbL-PhoP_reg: PhoP r 96.9 0.027 5.9E-07 51.9 13.5 124 42-180 7-154 (199)
470 PRK09550 mtnK methylthioribose 96.8 0.022 4.7E-07 58.2 13.7 76 40-124 30-113 (401)
471 cd05157 ETNK_euk Ethanolamine 96.7 0.015 3.2E-07 54.7 10.6 74 41-127 3-78 (235)
472 KOG1093 Predicted protein kina 96.6 0.006 1.3E-07 63.0 7.7 91 292-418 110-200 (725)
473 cd05153 HomoserineK_II Homoser 96.2 0.024 5.1E-07 55.3 8.9 79 41-127 19-100 (296)
474 TIGR02721 ycfN_thiK thiamine k 96.2 0.02 4.3E-07 54.7 8.2 69 44-127 4-74 (256)
475 cd05156 ChoK_euk Choline Kinas 95.8 0.093 2E-06 51.4 11.0 51 42-92 4-60 (302)
476 PF12260 PIP49_C: Protein-kina 95.7 0.021 4.5E-07 52.2 5.9 85 80-178 7-96 (188)
477 TIGR01767 MTRK 5-methylthiorib 95.7 0.1 2.2E-06 52.5 11.2 74 42-124 1-82 (370)
478 PRK05231 homoserine kinase; Pr 95.6 0.26 5.7E-06 48.5 13.7 77 41-124 27-104 (319)
479 KOG2268 Serine/threonine prote 95.5 0.013 2.8E-07 57.4 3.9 134 23-178 78-236 (465)
480 KOG1826 Ras GTPase activating 95.5 0.0089 1.9E-07 68.7 2.9 144 96-313 1287-1440(2724)
481 PRK12396 5-methylribose kinase 95.4 0.11 2.4E-06 52.9 10.3 75 41-124 34-115 (409)
482 PRK10593 hypothetical protein; 95.3 0.13 2.8E-06 50.5 10.2 110 38-161 16-126 (297)
483 TIGR00938 thrB_alt homoserine 95.1 0.3 6.4E-06 48.0 12.0 79 41-124 27-105 (307)
484 PLN02756 S-methyl-5-thioribose 94.8 0.43 9.3E-06 48.9 12.4 75 40-125 36-118 (418)
485 PLN02236 choline kinase 94.5 0.23 5E-06 49.8 9.7 56 37-93 38-97 (344)
486 cd05152 MPH2' Macrolide 2'-Pho 94.4 0.45 9.7E-06 46.2 11.1 45 45-91 20-64 (276)
487 COG5072 ALK1 Serine/threonine 94.2 0.18 3.9E-06 50.4 7.9 71 101-177 285-355 (488)
488 COG3173 Predicted aminoglycosi 93.3 0.7 1.5E-05 45.7 10.3 80 38-125 27-108 (321)
489 PF03881 Fructosamin_kin: Fruc 92.6 0.84 1.8E-05 44.6 9.8 76 38-124 19-94 (288)
490 PLN02421 phosphotransferase, a 92.3 0.85 1.8E-05 45.5 9.5 56 37-93 16-74 (330)
491 PF07387 Seadorna_VP7: Seadorn 92.2 0.46 1E-05 44.4 6.8 73 76-177 102-176 (308)
492 KOG1236 Predicted unusual prot 92.1 0.62 1.3E-05 47.4 8.0 59 117-179 320-380 (565)
493 COG2334 Putative homoserine ki 90.7 3.1 6.7E-05 41.5 11.5 82 43-129 33-116 (331)
494 PRK11768 serine/threonine prot 89.1 7.8 0.00017 38.4 13.1 45 47-92 36-80 (325)
495 PF03109 ABC1: ABC1 family; I 85.1 0.56 1.2E-05 39.4 1.9 46 41-89 16-61 (119)
496 PTZ00384 choline kinase; Provi 84.9 6.4 0.00014 40.1 9.9 72 40-124 54-131 (383)
497 PTZ00296 choline kinase; Provi 81.7 11 0.00023 39.3 10.1 54 40-93 109-170 (442)
498 TIGR02906 spore_CotS spore coa 80.0 3.2 7E-05 40.4 5.4 66 51-124 11-77 (313)
499 KOG1033 eIF-2alpha kinase PEK/ 75.0 0.73 1.6E-05 47.8 -0.8 71 36-112 49-121 (516)
500 COG3231 Aph Aminoglycoside pho 74.9 28 0.0006 32.9 9.5 109 31-161 16-126 (266)
No 1
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-67 Score=515.79 Aligned_cols=420 Identities=56% Similarity=1.010 Sum_probs=348.6
Q ss_pred CCCCCCCCCCCCccccCCCCCCCccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHH
Q 013220 1 MSCSSSSGSEDDDEGIDSYRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAAL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~ 80 (447)
|+|+..++.++++|...+|+.||||||.+||+++++||.++++||+|.|+|||+|+|...++.||+|+.+......+...
T Consensus 43 ~~~~~~g~~~~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAl 122 (590)
T KOG1290|consen 43 MSSSILGSDDEEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAAL 122 (590)
T ss_pred CccccccCCcccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHH
Confidence 67888888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCC--CCCcceeeeecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Q 013220 81 HEIEVLSAVADGD--PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158 (447)
Q Consensus 81 ~E~~~l~~l~~~~--~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~ 158 (447)
+||++|+.+.... ..+-.+||++++.|...+++|.|+|||+|++|..|+.++.+..+++++...++.|++||+.||.|
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdY 202 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDY 202 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999998655 66778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCcccccCCCCCeEeeec-CCCCCCcccCCCCCCcCC--CCCCCCCCC------------CCchHHHHHHHHHHHh
Q 013220 159 LHRELGIIHTDLKPENILLVST-IDPSKDPIRSGLTPILER--PEGSINGGS------------TSTMTIVEKKLKRRAK 223 (447)
Q Consensus 159 lH~~~gIiH~Dikp~Nill~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~------------~~~~~~~~~~~~~~~~ 223 (447)
||.++||||.||||+|||++.. .......+..+..+...+ +.+.....+ ....-.-.++..+.++
T Consensus 203 LH~ecgIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~ 282 (590)
T KOG1290|consen 203 LHRECGIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAK 282 (590)
T ss_pred HHHhcCccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhh
Confidence 9999999999999999999887 233333333331111111 111111110 1111111111111111
Q ss_pred hhhhh------------------------h--hhhhcccC--------CCCCCCC-------------------------
Q 013220 224 RAVAN------------------------I--SIRRASMG--------GIELPKP------------------------- 244 (447)
Q Consensus 224 ~~~~~------------------------~--~~~~~~~~--------~~~~~~~------------------------- 244 (447)
+.... . ..+..... ..++...
T Consensus 283 ~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~ 362 (590)
T KOG1290|consen 283 KLEASLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSD 362 (590)
T ss_pred hhhhhhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhccccccccc
Confidence 11110 0 00000000 0000000
Q ss_pred ----C----------------ccCCCcccceeEeecCcccccccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHH
Q 013220 245 ----E----------------RCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAF 304 (447)
Q Consensus 245 ----~----------------~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ 304 (447)
. .........|||+|||.|+......+....|..|+|||++.+..|++.+||||++|+++
T Consensus 363 ~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~F 442 (590)
T KOG1290|consen 363 GSLSSPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAF 442 (590)
T ss_pred ccccCcCCccccccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHH
Confidence 0 01234567899999999999998889999999999999999999999999999999999
Q ss_pred HHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhh
Q 013220 305 ELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETD 384 (447)
Q Consensus 305 ~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (447)
+|+||-++|...+...+..++++++.|++++|.+|..++..+.++++||++.|.++.++...+|.+..++...+.++.+.
T Consensus 443 ELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~ 522 (590)
T KOG1290|consen 443 ELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEED 522 (590)
T ss_pred HhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 385 AREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 385 ~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
..+|.+||.-||+++|+|||||.++|+|||+...-.
T Consensus 523 A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~ 558 (590)
T KOG1290|consen 523 AQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG 558 (590)
T ss_pred HHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence 999999999999999999999999999999996654
No 2
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.3e-51 Score=416.59 Aligned_cols=313 Identities=37% Similarity=0.587 Sum_probs=268.8
Q ss_pred cccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeec
Q 013220 25 HAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLI 104 (447)
Q Consensus 25 ~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~ 104 (447)
+.+.++|.+. .+|.+.+.||+|+||.|-+|++..+++.||||+++......++...|+.+|..+......+.-|||+++
T Consensus 176 Y~~v~~d~i~-~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~ 254 (586)
T KOG0667|consen 176 YQLVVNDHIA-YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRML 254 (586)
T ss_pred eeEEecceeE-EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEee
Confidence 4566788887 499999999999999999999999999999999999999999999999999999855555788999999
Q ss_pred ccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 105 DHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 105 ~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
++|.+. .|+|||+|.++..|+++++.+...+++...++.++.||+.||.+||+. ||||+||||+|||+...
T Consensus 255 d~F~fr----~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~---- 325 (586)
T KOG0667|consen 255 DYFYFR----NHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDP---- 325 (586)
T ss_pred eccccc----cceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccC----
Confidence 999975 799999999999999999999999999999999999999999999995 99999999999999652
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
....+||+|||.|+
T Consensus 326 ------------------------------------------------------------------~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 326 ------------------------------------------------------------------KRSRIKVIDFGSSC 339 (586)
T ss_pred ------------------------------------------------------------------CcCceeEEeccccc
Confidence 23479999999999
Q ss_pred ccccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 265 RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 265 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
...+....++.+.+|+|||+|.|.+|+.+.||||||||++||++|.+.|++. +..++++.|++++|.+|..++.
T Consensus 340 ~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~------ne~DQl~~I~e~lG~Pp~~mL~ 413 (586)
T KOG0667|consen 340 FESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD------NEYDQLARIIEVLGLPPPKMLD 413 (586)
T ss_pred ccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC------CHHHHHHHHHHHhCCCCHHHHH
Confidence 9888888889999999999999999999999999999999999999999988 5899999999999999999999
Q ss_pred CCCCccchhcc-cchhhhhhhcccC---------chhHHhhhhcC-----------CChhhHHHHHHHHhhccccCCCCC
Q 013220 345 GGAQSKDYFDR-HGDLKRIRRLKFW---------SLDRLLVDKYR-----------FSETDAREFAEFLVPLLDFTPEKR 403 (447)
Q Consensus 345 ~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~-----------~~~~~~~~l~~ll~~~L~~dP~kR 403 (447)
.+.+..-+|+. .+........... ..-........ ........|.|||.+||++||.+|
T Consensus 414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R 493 (586)
T KOG0667|consen 414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER 493 (586)
T ss_pred hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence 99988888888 4443321111100 00000000101 122345688999999999999999
Q ss_pred CChHHHhcCccccccc
Q 013220 404 PTAQQCLQHPWLSLRN 419 (447)
Q Consensus 404 pta~elL~hp~f~~~~ 419 (447)
+|+.|+|+||||+...
T Consensus 494 ~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 494 ITPAQALNHPFLTGTS 509 (586)
T ss_pred CCHHHHhcCccccccc
Confidence 9999999999999543
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-51 Score=398.44 Aligned_cols=257 Identities=33% Similarity=0.539 Sum_probs=214.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHh--------HHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF--------AQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
+.|.+.+.||+|+||+|-+|..+.+++.||||++.++... ...+.+|+++|+.| +|||||++++.|
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL------~HP~IV~~~d~f 245 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL------SHPNIVRIKDFF 245 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc------CCCCEEEEeeee
Confidence 6799999999999999999999999999999998876422 23467999999999 899999999999
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~ 186 (447)
... +..||||||+ ||+|++.+..+.. +.+...+.+++||+.|+.|||+. ||+||||||+|||+...
T Consensus 246 ~~~----ds~YmVlE~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNILl~~~------ 312 (475)
T KOG0615|consen 246 EVP----DSSYMVLEYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENILLSND------ 312 (475)
T ss_pred ecC----CceEEEEEEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHHHc-CcccccCCcceEEeccC------
Confidence 865 6889999999 9999999987654 88888899999999999999995 99999999999999542
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc
Q 013220 187 PIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA 266 (447)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~ 266 (447)
..++.+|++|||+|+..
T Consensus 313 ---------------------------------------------------------------~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 313 ---------------------------------------------------------------AEDCLLKITDFGLAKVS 329 (475)
T ss_pred ---------------------------------------------------------------CcceEEEecccchhhcc
Confidence 35678999999999876
Q ss_pred c--cccccCCCCCCccChHHhhcCC---CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 267 N--KQFAEEIQTRQYRAPEVILRAG---YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 267 ~--~~~~~~~gt~~y~aPE~l~~~~---~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
. +.-...|||+.|.|||++.... +..++|||||||++|.+++|.+||.+... +....+++
T Consensus 330 g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~-----~~sl~eQI---------- 394 (475)
T KOG0615|consen 330 GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT-----DPSLKEQI---------- 394 (475)
T ss_pred ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC-----CccHHHHH----------
Confidence 3 4445679999999999998654 34589999999999999999999987641 11111111
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcC----CChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYR----FSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
...++. ...+++++..+||.+||..||++|||++|+|+||||+.
T Consensus 395 --------------------------------~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 395 --------------------------------LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred --------------------------------hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 111111 22467889999999999999999999999999999997
Q ss_pred ccCC
Q 013220 418 RNST 421 (447)
Q Consensus 418 ~~~~ 421 (447)
....
T Consensus 443 ~~~~ 446 (475)
T KOG0615|consen 443 APCL 446 (475)
T ss_pred cccc
Confidence 6543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-49 Score=379.13 Aligned_cols=259 Identities=28% Similarity=0.446 Sum_probs=219.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEec--hhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQK--SAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+..+..+.||+|..|+||+++|+.+++.+|+|++. .+....+++.+|+++++.. +||+||++|++|...+
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~------~spyIV~~ygaF~~~~-- 150 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC------QSPYIVGFYGAFYSNG-- 150 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC------CCCCeeeEeEEEEeCC--
Confidence 46788899999999999999999999999999883 4456678899999999999 8999999999999762
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..+.|+|||| +|+|.+++... +.+++.....++.+|+.||.|||...+||||||||.|||+
T Consensus 151 -~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv--------------- 212 (364)
T KOG0581|consen 151 -EEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV--------------- 212 (364)
T ss_pred -ceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---------------
Confidence 2699999999 89999998754 4599999999999999999999963499999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-ccc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFA 271 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~-~~~ 271 (447)
+..+.+||||||.+..... ...
T Consensus 213 ---------------------------------------------------------NskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 213 ---------------------------------------------------------NSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred ---------------------------------------------------------ccCCCEEeccccccHHhhhhhcc
Confidence 4578899999999986554 456
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
.++||..|||||.+.+..|+.++||||||++++|++.|++||..... ......+.+..+.-.+|
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~----~~~~~~~Ll~~Iv~~pp------------ 299 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP----PYLDIFELLCAIVDEPP------------ 299 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC----CCCCHHHHHHHHhcCCC------------
Confidence 78999999999999999999999999999999999999999986510 12233333333333222
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChh-hHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
+.+|.. .+++|++|+..||++||.+|||++|+|+|||++...
T Consensus 300 --------------------------P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 300 --------------------------PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred --------------------------CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 235554 688999999999999999999999999999999643
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-50 Score=392.04 Aligned_cols=287 Identities=33% Similarity=0.510 Sum_probs=236.0
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHH--HHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA--ALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~--~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
-.||.++++||.|+||.||+|+...++..||||.++..-..-++ -.+|+..|+++. .|+|||++.+++.+.
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln-----~hpniikL~Evi~d~-- 81 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----PHPNIIKLKEVIRDN-- 81 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC-----CCCcchhhHHHhhcc--
Confidence 37999999999999999999999999999999987766443333 456999999983 499999999999975
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..++|+|||||...|+.+++.. .+.|+++.++.|++||+.||+|+|.+ |+.|||+||+|||+.
T Consensus 82 -~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~-------------- 144 (538)
T KOG0661|consen 82 -DRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILIS-------------- 144 (538)
T ss_pred -CceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEec--------------
Confidence 2399999999999999999876 57899999999999999999999997 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--ccc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQF 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--~~~ 270 (447)
....+||+|||+|.... .+.
T Consensus 145 ----------------------------------------------------------~~~~iKiaDFGLARev~SkpPY 166 (538)
T KOG0661|consen 145 ----------------------------------------------------------GNDVIKIADFGLAREVRSKPPY 166 (538)
T ss_pred ----------------------------------------------------------ccceeEecccccccccccCCCc
Confidence 24569999999998654 556
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
+.++.|.||+|||++.+. .|+.++|||++|||++|+++-+..|++. ++.+++-.|-+++|++.++.+...
T Consensus 167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~------sE~Dqi~KIc~VLGtP~~~~~~eg--- 237 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA------SEIDQIYKICEVLGTPDKDSWPEG--- 237 (538)
T ss_pred chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC------cHHHHHHHHHHHhCCCccccchhH---
Confidence 788999999999998875 5899999999999999999999999998 588999999999999886542111
Q ss_pred cchhcccchhhhhhhcccC-----chhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFW-----SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 424 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~~ 424 (447)
.++....+..+. .+..+ ++ ..+.++.++|.+||.+||++||||+|+|+||||+........
T Consensus 238 -------~~La~~mnf~~P~~~~~~l~~L------~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~~~~ 303 (538)
T KOG0661|consen 238 -------YNLASAMNFRFPQVKPSPLKDL------LP-NASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRASGSS 303 (538)
T ss_pred -------HHHHHHhccCCCcCCCCChHHh------Cc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccccccc
Confidence 122222222221 12222 22 257789999999999999999999999999999987655443
Q ss_pred cc
Q 013220 425 TK 426 (447)
Q Consensus 425 ~~ 426 (447)
+.
T Consensus 304 a~ 305 (538)
T KOG0661|consen 304 AR 305 (538)
T ss_pred cc
Confidence 33
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-48 Score=392.79 Aligned_cols=249 Identities=31% Similarity=0.523 Sum_probs=219.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEech----hHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS----AAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.+|...+.||+|+|++||.+++..+|+.||+|++.+ .....+.+.+|+++++.+ .|+|||+++.+|.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L------~HpnIV~f~~~FEDs- 90 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL------KHPNIVQFYHFFEDS- 90 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc------CCCcEEeeeeEeecC-
Confidence 569999999999999999999999999999998776 345567899999999999 899999999999976
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
..+|||.|.| .++|..+.++ .+.+.|.+++.+++||+.||.|||+. +|+|||||..|+++
T Consensus 91 ---~nVYivLELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL------------- 151 (592)
T KOG0575|consen 91 ---NNVYIVLELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFL------------- 151 (592)
T ss_pred ---CceEEEEEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc-Cceecccchhheee-------------
Confidence 7999999999 8888888873 36799999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--- 267 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--- 267 (447)
+.++++|++|||+|....
T Consensus 152 -----------------------------------------------------------~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 152 -----------------------------------------------------------NENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred -----------------------------------------------------------cCcCcEEecccceeeeecCcc
Confidence 557899999999998766
Q ss_pred cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 268 KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 268 ~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
......||||-|.|||++.+...++.+||||+||+||.|+.|++||...+ +...
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~----------vket---------------- 226 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT----------VKET---------------- 226 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch----------HHHH----------------
Confidence 33556799999999999999999999999999999999999999997553 1111
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
...+-...+.+|...+.++.+||.+||+.||.+|||++++|.|+||+.
T Consensus 227 ----------------------y~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 227 ----------------------YNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred ----------------------HHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 233444556678888999999999999999999999999999999943
No 7
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.2e-47 Score=351.78 Aligned_cols=285 Identities=31% Similarity=0.467 Sum_probs=233.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.+|...++||+|.||.||+|++..+++.||||.++.... ......+|+++|+.+ +|+||+.++++|-+.
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel------~h~nIi~LiD~F~~~-- 73 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL------KHPNIIELIDVFPHK-- 73 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc------cCcchhhhhhhccCC--
Confidence 579999999999999999999999999999998876542 255788999999999 899999999999865
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..+.+|+||+..+|..+++... ..++...++.++.+++.||+|||++ .|+|||+||.|+|+
T Consensus 74 --~~l~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLi--------------- 134 (318)
T KOG0659|consen 74 --SNLSLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLI--------------- 134 (318)
T ss_pred --CceEEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEE---------------
Confidence 6799999999999999886543 5689999999999999999999998 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
..++.+|++|||+++....+
T Consensus 135 ---------------------------------------------------------s~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 135 ---------------------------------------------------------SSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred ---------------------------------------------------------cCCCcEEeecccchhccCCCCcc
Confidence 44678999999999866543
Q ss_pred cccCCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.+..+-|.+|+|||.++|.+ |+..+||||.|||++||+-|...|++. ++.+++..+++.+|++.++.+.....
T Consensus 158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~------sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD------SDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC------chHHHHHHHHHHcCCCCcccCccccc
Confidence 33347899999999999974 899999999999999999998888877 69999999999999998765433333
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 424 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~~ 424 (447)
.-+| ..+......++.. +-...++.+.||+.+||..||.+|+|++|+|+|+||+..-..+..
T Consensus 232 lpdY-------~~~~~~P~~~~~~-------lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~ 293 (318)
T KOG0659|consen 232 LPDY-------VKIQQFPKPPLNN-------LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPP 293 (318)
T ss_pred cccH-------HHHhcCCCCcccc-------ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCCh
Confidence 2222 1111111111111 222345566899999999999999999999999999975444433
No 8
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.3e-48 Score=359.72 Aligned_cols=283 Identities=26% Similarity=0.449 Sum_probs=231.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|+...++|+|+||+||+|+++.||+.||||.+...+ ...+...+|+++|+.+ .|+|+|.++.+|...
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL------kH~NLVnLiEVFrrk-- 73 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL------KHENLVNLIEVFRRK-- 73 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc------ccchHHHHHHHHHhc--
Confidence 46888899999999999999999999999999776543 3456788999999999 899999999999864
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..+++|+|||+.++.+.+.+.. .+++...++.+++|++.|+.|||++ ++|||||||+|||++
T Consensus 74 --rklhLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit-------------- 135 (396)
T KOG0593|consen 74 --RKLHLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILIT-------------- 135 (396)
T ss_pred --ceeEEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEe--------------
Confidence 7899999999999888887655 5799999999999999999999997 999999999999994
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQ 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~ 269 (447)
..+.+||||||+|.... ..
T Consensus 136 ----------------------------------------------------------~~gvvKLCDFGFAR~L~~pgd~ 157 (396)
T KOG0593|consen 136 ----------------------------------------------------------QNGVVKLCDFGFARTLSAPGDN 157 (396)
T ss_pred ----------------------------------------------------------cCCcEEeccchhhHhhcCCcch
Confidence 46789999999997654 33
Q ss_pred cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
-+.++-|.||+|||.+.+ ..|+..+||||+||++.+|++|...|++. .+.+++-.|...+|.+..+-..
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~------SDiDQLy~I~ktLG~L~prhq~---- 227 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR------SDIDQLYLIRKTLGNLIPRHQS---- 227 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc------chHHHHHHHHHHHcccCHHHHH----
Confidence 456788999999999998 57999999999999999999999999998 4899999999999998876432
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.|...+...-++.......+.. ..+ + ..++..+.||+.+||+.||++|++.+|+|.||||+...
T Consensus 228 ---iF~~N~~F~Gv~lP~~~~~epL-e~k--~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 228 ---IFSSNPFFHGVRLPEPEHPEPL-ERK--Y-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred ---HhccCCceeeeecCCCCCccch-hhh--c-ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 2222222211111111111111 111 1 23455788999999999999999999999999996543
No 9
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.6e-47 Score=359.32 Aligned_cols=284 Identities=28% Similarity=0.416 Sum_probs=235.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+.|+...+|++|+||.||+|+++.+++.||+|.++.+.. ..-...+|+.+|..+ +|+|||.+-.+....
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~------~H~NIV~vkEVVvG~-- 147 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA------RHPNIVEVKEVVVGS-- 147 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc------CCCCeeeeEEEEecc--
Confidence 459999999999999999999999999999998876543 233577899999999 799999999988765
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+-+.+|+|||||..+|.+++..-. +.|...+++.++.|++.|++|||.+ .|+|||+|+.|+|+
T Consensus 148 ~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm--------------- 210 (419)
T KOG0663|consen 148 NMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLL--------------- 210 (419)
T ss_pred ccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheee---------------
Confidence 456799999999999999997654 5799999999999999999999997 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
...+.+|++|||+|..++.+
T Consensus 211 ---------------------------------------------------------~~~G~lKiaDFGLAR~ygsp~k~ 233 (419)
T KOG0663|consen 211 ---------------------------------------------------------SHKGILKIADFGLAREYGSPLKP 233 (419)
T ss_pred ---------------------------------------------------------ccCCcEEecccchhhhhcCCccc
Confidence 44788999999999988877
Q ss_pred cccCCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.+..+-|.+|+|||.+.+.+ |++++||||+|||+.+++.+...|++. ...+++..+++++|.+.+.++.+...
T Consensus 234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~------sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK------SEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC------chHHHHHHHHHHhCCCccccCCCccc
Confidence 44557799999999999875 899999999999999999999999988 58899999999999999887433222
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChh-hHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
.. .+. ........+.++... |+.. .++...+|+..+|.+||.+|.||+|+|+|+||.+.
T Consensus 308 lp-~~k----~~~f~~~pyn~lr~k------F~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 308 LP-AVK----KMTFSEHPYNNLRKK------FGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred cc-hhh----ccccCCCCchhhhhh------ccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 11 000 001111122222222 2222 56788999999999999999999999999999984
No 10
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-47 Score=362.13 Aligned_cols=295 Identities=29% Similarity=0.481 Sum_probs=240.1
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEec---hhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc-c
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQK---SAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH-A 110 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~-~ 110 (447)
..+|...+.||.|+||.|+.|.+..+|+.||||.+. ......+...+|+++|+.+ .|+||+.+.+.+.- .
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~------~HeNIi~l~di~~p~~ 94 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL------RHENIIGLLDIFRPPS 94 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh------cCCCcceEEeeccccc
Confidence 467777899999999999999999999999999765 2345577889999999999 78999999998876 2
Q ss_pred CCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 111 GPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 111 ~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
......+|+|+|+|+.+|..++..+. .++...+..+++|++.||+|+|+. +|+|||+||.|+++
T Consensus 95 ~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~------------- 158 (359)
T KOG0660|consen 95 RDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLL------------- 158 (359)
T ss_pred ccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcc-cccccccchhheee-------------
Confidence 23456899999999999999998654 389999999999999999999995 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--- 267 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--- 267 (447)
+.++.+|++|||+|...+
T Consensus 159 -----------------------------------------------------------n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 159 -----------------------------------------------------------NADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred -----------------------------------------------------------ccCCCEEeccccceeeccccC
Confidence 446778999999998763
Q ss_pred --cccccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 268 --KQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 268 --~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
...+.++-|.+|+|||++.. ..|+.++||||+|||+++|++|+..|++. ....++..+++++|+++++...
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~------d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK------DYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC------chHHHHHHHHHhcCCCCHHHHH
Confidence 34577899999999999875 47999999999999999999999999998 4889999999999999877542
Q ss_pred CCC--CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCc
Q 013220 345 GGA--QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 345 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~ 422 (447)
... +...|...- +...-.++.++ ++ ..++.+.|||.+||.+||.+|+|++|+|+|||+..-+...
T Consensus 254 ~i~s~~ar~yi~sl------p~~p~~~f~~~------fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~ 320 (359)
T KOG0660|consen 254 KIRSEKARPYIKSL------PQIPKQPFSSI------FP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE 320 (359)
T ss_pred HhccHHHHHHHHhC------CCCCCCCHHHH------cC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence 211 111121111 11111122222 22 4466888999999999999999999999999999988777
Q ss_pred ccccccC
Q 013220 423 DETKNKS 429 (447)
Q Consensus 423 ~~~~~~~ 429 (447)
.+.-...
T Consensus 321 dEP~~~~ 327 (359)
T KOG0660|consen 321 DEPVCQP 327 (359)
T ss_pred cCCCCCC
Confidence 7664433
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=360.11 Aligned_cols=264 Identities=28% Similarity=0.421 Sum_probs=221.6
Q ss_pred ccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 31 DLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 31 ~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
...+-+.|++.+.||+|+||.|++++.+.+++.||+|++++... ......+|..+|..+ +||.||+++-.
T Consensus 20 ~~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v------~hPFiv~l~ys 93 (357)
T KOG0598|consen 20 EMVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI------KHPFIVKLIYS 93 (357)
T ss_pred ccCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC------CCCcEeeeEEe
Confidence 44555899999999999999999999999999999999887642 356788999999998 89999999999
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
|++ ...+|+|+||+ ||.|+..+.+. +.+++..++.++..|+.||.|||++ ||||||+||+|||+
T Consensus 94 FQt----~~kLylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILL-------- 158 (357)
T KOG0598|consen 94 FQT----EEKLYLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILL-------- 158 (357)
T ss_pred ccc----CCeEEEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeee--------
Confidence 885 48999999999 89999999765 3499999999999999999999997 99999999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
+..+.++|+|||+|+.
T Consensus 159 ----------------------------------------------------------------d~~GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 159 ----------------------------------------------------------------DEQGHIKLTDFGLCKE 174 (357)
T ss_pred ----------------------------------------------------------------cCCCcEEEeccccchh
Confidence 6689999999999973
Q ss_pred c-c--cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 266 A-N--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 266 ~-~--~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
. . .....+|||+.|+|||++.+.+|+.++|.|||||++|+|++|..||.+.+. . .+
T Consensus 175 ~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~------~----~~----------- 233 (357)
T KOG0598|consen 175 DLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV------K----KM----------- 233 (357)
T ss_pred cccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH------H----HH-----------
Confidence 2 2 233446999999999999999999999999999999999999999987641 1 11
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh-hhHHHHHHHHhhccccCCCCCC----ChHHHhcCccccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE-TDAREFAEFLVPLLDFTPEKRP----TAQQCLQHPWLSL 417 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~kRp----ta~elL~hp~f~~ 417 (447)
.+.+...+...++ -.+.++++||+++|+.||++|. .+.++-+||||..
T Consensus 234 ---------------------------~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 234 ---------------------------YDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred ---------------------------HHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence 1222222322233 3678999999999999999996 6899999999998
Q ss_pred ccCCcccccc
Q 013220 418 RNSTRDETKN 427 (447)
Q Consensus 418 ~~~~~~~~~~ 427 (447)
.+=.....+.
T Consensus 287 inW~~l~~k~ 296 (357)
T KOG0598|consen 287 INWEKLLAKK 296 (357)
T ss_pred CCHHHHHhcC
Confidence 8644444333
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-46 Score=372.60 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=221.7
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
-.+|.+.+.||+|+|++|++|+++.+++.||||++.++-. ....+..|-++|..|. +||+|++++-.|.+.
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-----~hPgivkLy~TFQD~ 146 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-----GHPGIVKLYFTFQDE 146 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-----CCCCeEEEEEEeecc
Confidence 3679999999999999999999999999999998776532 2446778999999997 899999999999965
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
..+|+|+||+ +|+|.+++... ..|++..++.++.+|+.||+|||++ |||||||||+|||+
T Consensus 147 ----~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILL------------ 207 (604)
T KOG0592|consen 147 ----ESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILL------------ 207 (604)
T ss_pred ----cceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeE------------
Confidence 7899999999 99999999855 4599999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK- 268 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~- 268 (447)
+.+++++|.|||.|+.+..
T Consensus 208 ------------------------------------------------------------d~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 208 ------------------------------------------------------------DKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred ------------------------------------------------------------cCCCcEEEeeccccccCChh
Confidence 7789999999999975431
Q ss_pred ---------------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 269 ---------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 269 ---------------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
....+|||-.|++||++.....+..+|||+||||+|+|++|.+||.+.. +...
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N------eyli------ 295 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN------EYLI------ 295 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc------HHHH------
Confidence 1244789999999999999999999999999999999999999998763 2222
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
+.+++.-.+.++...++.++||+.++|..||.+|+|++||-+||
T Consensus 296 ------------------------------------FqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 296 ------------------------------------FQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred ------------------------------------HHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 44455556677888889999999999999999999999999999
Q ss_pred cccccc
Q 013220 414 WLSLRN 419 (447)
Q Consensus 414 ~f~~~~ 419 (447)
||...+
T Consensus 340 FF~~Vd 345 (604)
T KOG0592|consen 340 FFEGVD 345 (604)
T ss_pred ccccCC
Confidence 998774
No 13
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4e-45 Score=380.75 Aligned_cols=330 Identities=28% Similarity=0.490 Sum_probs=244.8
Q ss_pred CCCCccccccCcccc--CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCc
Q 013220 20 RKGGYHAVRVGDLFN--GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNE 97 (447)
Q Consensus 20 ~~~~~~~~~~g~~~~--~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~ 97 (447)
...++.++.+|+.+. .++|++.++||+|+||+||+|.+..+++.||||+++...........|+++++.+.+.+..+|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 111 REEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADR 190 (467)
T ss_pred CCCCceeEecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccC
Confidence 344566777777553 479999999999999999999999999999999987655555667889999999988877788
Q ss_pred ceeeeecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 98 KCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
.++++++.+|... ..+.|+|||+++++|.+.+... ..+++..+..++.||+.||+|||++.|||||||||+|||+
T Consensus 191 ~~i~~i~~~~~~~---~~~~~iv~~~~g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl 265 (467)
T PTZ00284 191 FPLMKIQRYFQNE---TGHMCIVMPKYGPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILM 265 (467)
T ss_pred cceeeeEEEEEcC---CceEEEEEeccCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE
Confidence 8899999888653 3589999999999998887643 3589999999999999999999973499999999999999
Q ss_pred eecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeE
Q 013220 178 VSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKV 257 (447)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL 257 (447)
...... +.+. .........+.+||
T Consensus 266 ~~~~~~----~~~~----------------------------------------------------~~~~~~~~~~~vkl 289 (467)
T PTZ00284 266 ETSDTV----VDPV----------------------------------------------------TNRALPPDPCRVRI 289 (467)
T ss_pred ecCCcc----cccc----------------------------------------------------cccccCCCCceEEE
Confidence 542100 0000 00000012356999
Q ss_pred eecCcccccccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCC
Q 013220 258 VDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK 337 (447)
Q Consensus 258 ~Dfg~a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~ 337 (447)
+|||.+..........+||+.|+|||++.+..|+.++|||||||++|+|++|+.||... .....+..+.+.+|.
T Consensus 290 ~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~------~~~~~~~~i~~~~g~ 363 (467)
T PTZ00284 290 CDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH------DNLEHLHLMEKTLGR 363 (467)
T ss_pred CCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHcCC
Confidence 99999876555556678999999999999999999999999999999999999999765 466777888899999
Q ss_pred CCHHhhhCCC--CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 338 MPRKIAIGGA--QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 338 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
+|..|..... ...+++...+....... ...+.................+.|||.+||++||++|||++|+|+||||
T Consensus 364 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 364 LPSEWAGRCGTEEARLLYNSAGQLRPCTD--PKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441 (467)
T ss_pred CCHHHHhhccchhHHHHhhhcccccccCC--HHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence 9988754321 11223332222110000 0000011000000000124568899999999999999999999999999
Q ss_pred ccc
Q 013220 416 SLR 418 (447)
Q Consensus 416 ~~~ 418 (447)
...
T Consensus 442 ~~~ 444 (467)
T PTZ00284 442 LKY 444 (467)
T ss_pred ccc
Confidence 864
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-46 Score=367.36 Aligned_cols=281 Identities=25% Similarity=0.395 Sum_probs=230.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
..|+.+++||+|+||.||+|++..+++.||+|.+..+ ..+.....+||.+|++| +|+||+++.+.....
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l------~HpNIikL~eivt~~-- 188 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL------DHPNIIKLEEIVTSK-- 188 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc------CCCcccceeeEEEec--
Confidence 4589999999999999999999999999999976644 45667889999999999 899999999988765
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
....+|||+|||..+|.-++... .-.|++.+++.+|+|++.||+|||.+ ||+|||||..|||+
T Consensus 189 ~~~siYlVFeYMdhDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLi--------------- 251 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDHDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILI--------------- 251 (560)
T ss_pred CCceEEEEEecccchhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEE---------------
Confidence 34589999999999999888642 24599999999999999999999997 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc----c
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN----K 268 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~----~ 268 (447)
+..+.+||+|||+|..+. .
T Consensus 252 ---------------------------------------------------------dn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 252 ---------------------------------------------------------DNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred ---------------------------------------------------------cCCCCEEeccccceeeccCCCCc
Confidence 668899999999997544 2
Q ss_pred ccccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
+.+..+-|.||+|||.+.|. .|+.++|+||+||||.+|+.|+..|.+. ++..++..|++++|.+.+.++. ..
T Consensus 275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~------tEveQl~kIfklcGSP~e~~W~-~~ 347 (560)
T KOG0600|consen 275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR------TEVEQLHKIFKLCGSPTEDYWP-VS 347 (560)
T ss_pred ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc------cHHHHHHHHHHHhCCCChhccc-cc
Confidence 35667889999999999986 6999999999999999999999999988 6899999999999999987743 11
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
+. +.+..- .........+.+.. ...+....+|+..||..||++|.||.++|.|+||+.
T Consensus 348 kL-P~~~~~--------kp~~~y~r~l~E~~---~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 348 KL-PHATIF--------KPQQPYKRRLRETF---KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred cC-Cccccc--------CCCCcccchHHHHh---ccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 11 111000 00011112222221 223567889999999999999999999999999954
No 15
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=369.44 Aligned_cols=251 Identities=28% Similarity=0.472 Sum_probs=213.7
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-----H-HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-----A-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-----~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
.++|.+.+.||+|+||+|++|++..++..||+|++... . .....+.+|+.+++.+. .||||++++.++.
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~-----~HpnI~~l~ev~~ 90 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR-----SHPNIIRLLEVFA 90 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc-----cCCCEeEEEEEEe
Confidence 37999999999999999999999999999999976653 1 23456778999999994 4999999999998
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.. ..+|+||||| ||+|++.+... ..+.+..++.+|+|++.|++|||++ ||+||||||+||++.
T Consensus 91 t~----~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld--------- 154 (370)
T KOG0583|consen 91 TP----TKIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLD--------- 154 (370)
T ss_pred cC----CeEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEec---------
Confidence 65 5699999999 88999999862 4589999999999999999999996 999999999999993
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcc-cceeEeecCccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRA 266 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~kL~Dfg~a~~~ 266 (447)
.. .++||+|||++...
T Consensus 155 ---------------------------------------------------------------~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 155 ---------------------------------------------------------------GNEGNLKLSDFGLSAIS 171 (370)
T ss_pred ---------------------------------------------------------------CCCCCEEEecccccccc
Confidence 34 78999999999866
Q ss_pred ---ccccccCCCCCCccChHHhhcCC-CC-ccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 267 ---NKQFAEEIQTRQYRAPEVILRAG-YS-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 267 ---~~~~~~~~gt~~y~aPE~l~~~~-~~-~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
.......+||+.|+|||++.+.. |+ .++||||+||+||.|++|++||.... ...+.
T Consensus 172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~----------~~~l~--------- 232 (370)
T KOG0583|consen 172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN----------VPNLY--------- 232 (370)
T ss_pred CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc----------HHHHH---------
Confidence 34556779999999999999977 85 88999999999999999999997532 11111
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhh-HHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETD-AREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
..+......+|.-+ +.++.+||++||..||.+|+|+.++++||||+.
T Consensus 233 -----------------------------~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 233 -----------------------------RKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred -----------------------------HHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 11333344566666 889999999999999999999999999999997
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-46 Score=370.35 Aligned_cols=255 Identities=29% Similarity=0.498 Sum_probs=216.2
Q ss_pred CccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHh-HHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF-AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 30 g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
||-. ..|...++||+|+.|.||.|+...+++.||||.+...... .+-+.+|+.+|+.+ .|+|||++++.|.
T Consensus 269 ~dP~--~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~------~H~NiVnfl~Syl 340 (550)
T KOG0578|consen 269 GDPR--SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL------HHPNIVNFLDSYL 340 (550)
T ss_pred CChh--hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc------cchHHHHHHHHhc
Confidence 5554 5799999999999999999999999999999987665543 35688999999999 8999999999988
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.. +.+|+||||| |++|.+++.... ++|.++..+++.++.||+|||.+ ||+|||||.+|||++
T Consensus 341 v~----deLWVVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~--------- 403 (550)
T KOG0578|consen 341 VG----DELWVVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLT--------- 403 (550)
T ss_pred cc----ceeEEEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEec---------
Confidence 64 7899999999 889988886543 89999999999999999999997 999999999999994
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
..+++||+|||+|..+.
T Consensus 404 ---------------------------------------------------------------~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 404 ---------------------------------------------------------------MDGSVKLTDFGFCAQIS 420 (550)
T ss_pred ---------------------------------------------------------------cCCcEEEeeeeeeeccc
Confidence 46779999999997655
Q ss_pred cc---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 268 KQ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 268 ~~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
.. ....+||++|||||++.+..|++++||||||+++++|+.|..||...+ ....-.++...|.+.
T Consensus 421 ~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~-------PlrAlyLIa~ng~P~----- 488 (550)
T KOG0578|consen 421 EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN-------PLRALYLIATNGTPK----- 488 (550)
T ss_pred cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC-------hHHHHHHHhhcCCCC-----
Confidence 33 345689999999999999999999999999999999999999997542 222223333333322
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
...+..++.+|++||.+||+.||++|++|+|+|+||||+.
T Consensus 489 ---------------------------------lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 489 ---------------------------------LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred ---------------------------------cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 1245667889999999999999999999999999999964
No 17
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6e-45 Score=351.96 Aligned_cols=260 Identities=26% Similarity=0.434 Sum_probs=211.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|.+.++||+|+||+||+|+++.++..||||.+... ....+-+..|+.+|+.+ +|+|||.++++....
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel------~H~nIV~l~d~~~~~-- 81 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL------KHPNIVRLLDCIEDD-- 81 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc------CCcceeeEEEEEecC--
Confidence 6899999999999999999999999999999976544 45566788999999999 899999999999854
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+.+|+||||| ||+|..++... ..+++..++.++.|++.||++||++ +||||||||+|||++.....
T Consensus 82 --~~i~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~-------- 148 (429)
T KOG0595|consen 82 --DFIYLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARN-------- 148 (429)
T ss_pred --CeEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCC--------
Confidence 7999999999 89999999754 3599999999999999999999998 99999999999999653110
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--c
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--Q 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~ 269 (447)
+....+||+|||+|..... .
T Consensus 149 ----------------------------------------------------------~~~~~LKIADFGfAR~L~~~~~ 170 (429)
T KOG0595|consen 149 ----------------------------------------------------------DTSPVLKIADFGFARFLQPGSM 170 (429)
T ss_pred ----------------------------------------------------------CCCceEEecccchhhhCCchhH
Confidence 1115689999999976543 3
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....||++.|||||++....|+.|+|+||+|+++|++++|+.||...+..+ ....+. +..
T Consensus 171 a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e------L~~~~~----k~~---------- 230 (429)
T KOG0595|consen 171 AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE------LLLYIK----KGN---------- 230 (429)
T ss_pred HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH------HHHHHh----ccc----------
Confidence 455699999999999999999999999999999999999999997653111 100000 000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
...+..+...+..+.+++...|+.+|..|.+..+-+.|+++...-
T Consensus 231 -------------------------~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 231 -------------------------EIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred -------------------------cccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 001113344456677899999999999999999999999988643
No 18
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-45 Score=352.38 Aligned_cols=287 Identities=28% Similarity=0.436 Sum_probs=233.1
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC-cc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN-GQ 115 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~-~~ 115 (447)
+|.-.+.+|.|+||.||+|....+++.||||....+.+ .-.+|+++|+++ .|||||++.-+|.....+ .-
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l------~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKL------DHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhc------CCcCeeeEEEEEEecCCCchh
Confidence 49999999999999999999999999999996554433 457799999988 899999999999887666 34
Q ss_pred eEEEEEecccccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 116 HLCMVLEFLGDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 116 ~~~lvmE~~~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
++.+||||+..+|++.++.. ....++.-.++.+.+||+.||+|||+. ||+||||||.|+|++.
T Consensus 96 ~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~-------------- 160 (364)
T KOG0658|consen 96 YLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDP-------------- 160 (364)
T ss_pred HHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcC--------------
Confidence 88999999999999998753 234588889999999999999999995 9999999999999943
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--cccc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFA 271 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--~~~~ 271 (447)
..+.+||||||.|+... .+-.
T Consensus 161 ---------------------------------------------------------~tg~LKicDFGSAK~L~~~epni 183 (364)
T KOG0658|consen 161 ---------------------------------------------------------DTGVLKICDFGSAKVLVKGEPNI 183 (364)
T ss_pred ---------------------------------------------------------CCCeEEeccCCcceeeccCCCce
Confidence 25789999999998654 3334
Q ss_pred cCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 272 EEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
.+..|.+|+|||.+.+. .|+.+.||||.|||++||+.|+..|++. +..+++..+.+++|.+..+-....+..-
T Consensus 184 SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~------s~~dQL~eIik~lG~Pt~e~I~~mn~~y 257 (364)
T KOG0658|consen 184 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD------SSVDQLVEIIKVLGTPTREDIKSMNPNY 257 (364)
T ss_pred eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC------CHHHHHHHHHHHhCCCCHHHHhhcCccc
Confidence 56789999999999986 5999999999999999999999999997 5889999999999999976543333221
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~ 423 (447)
.- ..++......+.+ -+....+++..+|+.++|+.+|.+|.++.|+|.||||++-+....
T Consensus 258 ~~------------~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~ 317 (364)
T KOG0658|consen 258 TE------------FKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNT 317 (364)
T ss_pred cc------------ccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCc
Confidence 10 0111111111111 134456778999999999999999999999999999998776533
No 19
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-45 Score=369.77 Aligned_cols=262 Identities=25% Similarity=0.411 Sum_probs=229.1
Q ss_pred cccccCc-cccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcce
Q 013220 25 HAVRVGD-LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKC 99 (447)
Q Consensus 25 ~~~~~g~-~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~ 99 (447)
...+.+. .++-++|.+++.||+|+||.|++|..+.+++.||||+++++. +..+....|-+++.... .||.
T Consensus 356 ~~~~~~~~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-----~HPF 430 (694)
T KOG0694|consen 356 PEFPPRRGPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-----RHPF 430 (694)
T ss_pred ccCCCCCCcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-----cCCe
Confidence 3445555 777799999999999999999999999999999999999875 44667888999999986 7999
Q ss_pred eeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEee
Q 013220 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 100 Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
++.++.+|.. ..++|+||||+ ||++.... ....+++..++.+++.|+.||.|||++ |||+||||.+|||+
T Consensus 431 L~~L~~~fQT----~~~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLL- 501 (694)
T KOG0694|consen 431 LVNLFSCFQT----KEHLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLL- 501 (694)
T ss_pred Eeeccccccc----CCeEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEE-
Confidence 9999999984 58999999999 77733222 334599999999999999999999998 99999999999999
Q ss_pred ecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEe
Q 013220 179 STIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVV 258 (447)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~ 258 (447)
+.++.+||+
T Consensus 502 -----------------------------------------------------------------------D~eGh~kiA 510 (694)
T KOG0694|consen 502 -----------------------------------------------------------------------DTEGHVKIA 510 (694)
T ss_pred -----------------------------------------------------------------------cccCcEEec
Confidence 668999999
Q ss_pred ecCccccc---ccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHh
Q 013220 259 DFGNACRA---NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 335 (447)
Q Consensus 259 Dfg~a~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
|||+++.. +...+.+|||+.|+|||++.+..|+.++|.|||||+||+|+.|+.||.+.+..+
T Consensus 511 DFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee--------------- 575 (694)
T KOG0694|consen 511 DFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE--------------- 575 (694)
T ss_pred ccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH---------------
Confidence 99999742 345567899999999999999999999999999999999999999999875211
Q ss_pred CCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHh
Q 013220 336 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCL 410 (447)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL 410 (447)
-++.|+...+.+|.-.+.++.++++++|+.||++|.- ++++.
T Consensus 576 ---------------------------------~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~ 622 (694)
T KOG0694|consen 576 ---------------------------------VFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIK 622 (694)
T ss_pred ---------------------------------HHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhh
Confidence 1567778888899999999999999999999999984 68999
Q ss_pred cCccccccc
Q 013220 411 QHPWLSLRN 419 (447)
Q Consensus 411 ~hp~f~~~~ 419 (447)
.||||+.++
T Consensus 623 ~hpFFr~i~ 631 (694)
T KOG0694|consen 623 KHPFFRSID 631 (694)
T ss_pred hCCccccCC
Confidence 999999875
No 20
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=337.06 Aligned_cols=257 Identities=28% Similarity=0.446 Sum_probs=227.9
Q ss_pred CccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 30 g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
+...+-++|+..+.||.|+||.|-+++++.++..||+|++.... ...++..+|..+|+.+ .||.++++++
T Consensus 38 ~~~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v------~~PFlv~l~~ 111 (355)
T KOG0616|consen 38 QNPYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV------SHPFLVKLYG 111 (355)
T ss_pred CCCcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc------cCceeEEEEE
Confidence 44344588999999999999999999999999999999988764 4567889999999999 8999999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
.|.+. ..+|+||||+ ||.|++.+.+. +.+++..++.++.||+.||+|||+. +|++||+||+|||+
T Consensus 112 t~~d~----~~lymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLl------- 177 (355)
T KOG0616|consen 112 TFKDN----SNLYMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLL------- 177 (355)
T ss_pred eeccC----CeEEEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeee-------
Confidence 99865 7999999999 89999998754 3499999999999999999999996 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+..+.+|++|||+|+
T Consensus 178 -----------------------------------------------------------------D~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 178 -----------------------------------------------------------------DQNGHIKITDFGFAK 192 (355)
T ss_pred -----------------------------------------------------------------ccCCcEEEEeccceE
Confidence 668999999999999
Q ss_pred ccccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 265 RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 265 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
......-..|||+.|+|||++...+|+.++|.|||||++|+|+.|..||.+... ++
T Consensus 193 ~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---------~~--------------- 248 (355)
T KOG0616|consen 193 RVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---------IQ--------------- 248 (355)
T ss_pred EecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---------HH---------------
Confidence 888776667999999999999999999999999999999999999999987631 00
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
..+.|+..+..+|+-.+.++++||+++|+.|-.+|. -..++-+||||+...
T Consensus 249 ------------------------iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 249 ------------------------IYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred ------------------------HHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 135566777788998999999999999999999993 467999999999763
No 21
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=340.77 Aligned_cols=255 Identities=27% Similarity=0.442 Sum_probs=214.9
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.++|.+.+.||+|.|+.|++|.+..+|+.||+|++.... ..-+.+.+|+++.++| .||||+++.+.+...
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L------qHP~IvrL~~ti~~~- 82 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL------QHPNIVRLHDSIQEE- 82 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc------CCCcEeehhhhhccc-
Confidence 478999999999999999999999999999999876543 4556788999999999 899999999988753
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...|+|+|+| |++|...+..... +++..+-.+++||++||.|||.+ ||||||+||+|.++-..
T Consensus 83 ---~~~ylvFe~m~G~dl~~eIV~R~~--ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK---------- 146 (355)
T KOG0033|consen 83 ---SFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASK---------- 146 (355)
T ss_pred ---ceeEEEEecccchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeec----------
Confidence 6899999999 8888877765543 78999999999999999999997 99999999999999442
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--c
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--K 268 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--~ 268 (447)
+...-+||+|||+++... .
T Consensus 147 -----------------------------------------------------------~~~A~vKL~~FGvAi~l~~g~ 167 (355)
T KOG0033|consen 147 -----------------------------------------------------------AKGAAVKLADFGLAIEVNDGE 167 (355)
T ss_pred -----------------------------------------------------------cCCCceeecccceEEEeCCcc
Confidence 334568999999998655 3
Q ss_pred ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....++|||.|+|||++...+|+..+|||+.|||+|-|+.|++||.+.+.+ ...
T Consensus 168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~------rly-------------------- 221 (355)
T KOG0033|consen 168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLY-------------------- 221 (355)
T ss_pred ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH------HHH--------------------
Confidence 456679999999999999999999999999999999999999999876422 111
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCC----hhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS----ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
+++....++++ +.+++++++|+++||..||.+|+|+.|+|+|||+.++.
T Consensus 222 ----------------------e~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 222 ----------------------EQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred ----------------------HHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 22222222222 35688999999999999999999999999999999864
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-44 Score=347.17 Aligned_cols=268 Identities=32% Similarity=0.488 Sum_probs=220.3
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
++.+.|.+.+.||.|..++||+|+...+++.||||++..+.- ..+.+.+|+..+..+ +||||++++-+|...
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~------~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI------DHPNIVTYHCSFVVD 96 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc------CCCCcceEEEEEEec
Confidence 445889999999999999999999999999999999876642 356888999999998 899999999999964
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+.+|+||.|| +|++++++......+++|..+..+.++++.||.|||++ |-||||||+.|||+
T Consensus 97 ----~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi------------ 159 (516)
T KOG0582|consen 97 ----SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILI------------ 159 (516)
T ss_pred ----ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEE------------
Confidence 7999999999 99999999887777899999999999999999999997 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK- 268 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~- 268 (447)
+.++.|+|+|||.+....+
T Consensus 160 ------------------------------------------------------------~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 160 ------------------------------------------------------------DSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ------------------------------------------------------------cCCCcEEEcCceeeeeeccc
Confidence 5688999999998743221
Q ss_pred ------ccccCCCCCCccChHHhhc--CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 269 ------QFAEEIQTRQYRAPEVILR--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 269 ------~~~~~~gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
....++||++|+|||++.. ..|++|+||||||++.++|.+|..||.... .....++.+.+.+|.
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p--------PmkvLl~tLqn~pp~ 251 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP--------PMKVLLLTLQNDPPT 251 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC--------hHHHHHHHhcCCCCC
Confidence 1245689999999999765 369999999999999999999999996442 233344455555553
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.. .... +. +-....+..|+.++..||+.||++||||+++|+|+||+....
T Consensus 252 ~~-t~~~------~~-----------------------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 252 LL-TSGL------DK-----------------------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cc-cccC------Ch-----------------------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 22 0000 00 011223558999999999999999999999999999997654
Q ss_pred C
Q 013220 421 T 421 (447)
Q Consensus 421 ~ 421 (447)
+
T Consensus 302 ~ 302 (516)
T KOG0582|consen 302 K 302 (516)
T ss_pred h
Confidence 4
No 23
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-44 Score=365.21 Aligned_cols=251 Identities=29% Similarity=0.484 Sum_probs=217.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
|-|++.+-||.|+.|.|-+|++..||+.+|||++.... .....+.+|+.+|+.+ .||||+.+|++|...
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi------~HpnVl~LydVwe~~- 84 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI------EHPNVLRLYDVWENK- 84 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh------cCCCeeeeeeeeccC-
Confidence 68999999999999999999999999999999876652 2245688899999999 899999999999954
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
.++|+|.||+ ||.|++.+... +++.+.++++++.||+.|+.|||. ++|+|||+||+|+|+
T Consensus 85 ---~~lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~-~~icHRDLKpENlLL------------- 145 (786)
T KOG0588|consen 85 ---QHLYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHA-FNICHRDLKPENLLL------------- 145 (786)
T ss_pred ---ceEEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhh-hcceeccCCchhhhh-------------
Confidence 7999999999 99999888754 569999999999999999999999 599999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc--cc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA--NK 268 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~--~~ 268 (447)
+...++|++|||.|... +.
T Consensus 146 -----------------------------------------------------------d~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 146 -----------------------------------------------------------DVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred -----------------------------------------------------------hcccCEeeeccceeecccCCc
Confidence 44667999999999743 23
Q ss_pred ccccCCCCCCccChHHhhcCCC-CccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGY-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
-....||++.|.|||++.|.+| +.++||||.|||||.|++|++||.+. ++..+
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd----------Nir~L---------------- 220 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD----------NIRVL---------------- 220 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc----------cHHHH----------------
Confidence 4566799999999999999998 58999999999999999999999643 22222
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
+.++....+.+|.+++.++.+||++||+.||++|+|.+|+++|||+.--.
T Consensus 221 ----------------------LlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 221 ----------------------LLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred ----------------------HHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 23344455678899999999999999999999999999999999998543
No 24
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.4e-43 Score=353.90 Aligned_cols=307 Identities=29% Similarity=0.465 Sum_probs=228.9
Q ss_pred CCCccccccCccc--cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCC
Q 013220 21 KGGYHAVRVGDLF--NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPS 95 (447)
Q Consensus 21 ~~~~~~~~~g~~~--~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~ 95 (447)
.+.|++|.+|+.- -.++|++.+.||+|+||.||+|++..++..||+|++... ......+.+|+.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------ 77 (359)
T cd07876 4 DSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV------ 77 (359)
T ss_pred CCCcceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC------
Confidence 4568899888821 137999999999999999999999999999999987643 23345677899999998
Q ss_pred CcceeeeecccccccCC--CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 96 NEKCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 96 ~~~~Iv~~~~~~~~~~~--~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
+|+||+++++++..... ....+|+||||+++++...+. ..+++..+..++.|++.||+|||++ ||+||||||+
T Consensus 78 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~ 152 (359)
T cd07876 78 NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPS 152 (359)
T ss_pred CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHH
Confidence 89999999998865321 224689999999777776653 2378889999999999999999997 9999999999
Q ss_pred CeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc
Q 013220 174 NILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM 253 (447)
Q Consensus 174 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (447)
||++ +.++
T Consensus 153 NIl~------------------------------------------------------------------------~~~~ 160 (359)
T cd07876 153 NIVV------------------------------------------------------------------------KSDC 160 (359)
T ss_pred HEEE------------------------------------------------------------------------CCCC
Confidence 9999 3456
Q ss_pred ceeEeecCccccccc--ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHH
Q 013220 254 RCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM 331 (447)
Q Consensus 254 ~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~ 331 (447)
.++|+|||++..... ......+|..|+|||.+.+..++.++|||||||++|+|++|..||... +.......+
T Consensus 161 ~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~------~~~~~~~~~ 234 (359)
T cd07876 161 TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT------DHIDQWNKV 234 (359)
T ss_pred CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHH
Confidence 799999999865432 233457899999999999888999999999999999999999999866 345566677
Q ss_pred HHHhCCCCHHhhhCCCCc-cchhcccchhhhhhhcccCchhHHh-----hhhcCCChhhHHHHHHHHhhccccCCCCCCC
Q 013220 332 MELIGKMPRKIAIGGAQS-KDYFDRHGDLKRIRRLKFWSLDRLL-----VDKYRFSETDAREFAEFLVPLLDFTPEKRPT 405 (447)
Q Consensus 332 ~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt 405 (447)
.+.++..+..+....... ..+.......... .+.... ..........+..+.+||.+||+.||++|||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t 308 (359)
T cd07876 235 IEQLGTPSAEFMNRLQPTVRNYVENRPQYPGI------SFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRIS 308 (359)
T ss_pred HHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCc------chhhhccccccccccccccccchhHHHHHHHHhccCcccCCC
Confidence 777777666543221111 0111111000000 000000 0000112233567899999999999999999
Q ss_pred hHHHhcCcccccccCCc
Q 013220 406 AQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 406 a~elL~hp~f~~~~~~~ 422 (447)
++|+|+||||+.+....
T Consensus 309 ~~e~l~hp~~~~~~~~~ 325 (359)
T cd07876 309 VDEALRHPYITVWYDPA 325 (359)
T ss_pred HHHHhcCchhhhhcCcc
Confidence 99999999998654433
No 25
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.2e-43 Score=344.99 Aligned_cols=253 Identities=26% Similarity=0.356 Sum_probs=209.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||+|+||+||+|++..+++.||+|++.... ...+.+.+|+++++.+ .|+||+++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~~~~-- 72 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV------SHPFIIRLFWTEHD-- 72 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC------CCCcHhhhHhhhcc--
Confidence 36999999999999999999999999999999886542 2345678899999999 78999999988774
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+++||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 73 --~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli------------- 134 (291)
T cd05612 73 --QRFLYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILL------------- 134 (291)
T ss_pred --CCeEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEE-------------
Confidence 46899999999 88998888654 3588999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.++|+|||++.......
T Consensus 135 -----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 135 -----------------------------------------------------------DKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred -----------------------------------------------------------CCCCCEEEEecCcchhccCCc
Confidence 345679999999997665554
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
...+|++.|+|||++.+..++.++|||||||++|+|++|..||...+ .......
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~------~~~~~~~-------------------- 209 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN------PFGIYEK-------------------- 209 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHH--------------------
Confidence 45679999999999998889999999999999999999999997542 1111111
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccccCC
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNST 421 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~~~~ 421 (447)
+......++...+..+.+||.+||+.||.+||+ ++++++||||+...-.
T Consensus 210 ----------------------i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 210 ----------------------ILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred ----------------------HHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 111122344455678999999999999999995 9999999999865433
No 26
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.8e-43 Score=340.46 Aligned_cols=278 Identities=26% Similarity=0.449 Sum_probs=216.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.++||.|+||+||+|++..++..||+|+++... .....+.+|+++++.+ +|+||+++++++..
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~---- 74 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL------KHANIVTLHDIIHT---- 74 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC------CCCCEeeEEEEEcC----
Confidence 67999999999999999999999999999999876432 2234677899999999 78999999998874
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
....++||||+.++|.+.+.... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 75 ~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~---------------- 136 (288)
T cd07871 75 ERCLTLVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLI---------------- 136 (288)
T ss_pred CCeEEEEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEE----------------
Confidence 36899999999778888775432 3478899999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---cc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QF 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---~~ 270 (447)
+....+||+|||++..... ..
T Consensus 137 --------------------------------------------------------~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 137 --------------------------------------------------------NEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred --------------------------------------------------------CCCCCEEECcCcceeeccCCCccc
Confidence 3356799999999865432 22
Q ss_pred ccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+. +....+..+.+.++..+..........
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGS------TVKEELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChHHhhccccc
Confidence 33467899999999876 46899999999999999999999999765 356677788888888877654332222
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.++.... ..... ...... .....+.++.+||.+||++||.+|||++|+|+||||
T Consensus 235 ~~~~~~~-------~~~~~-~~~~~~----~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 235 EEFRSYL-------FPQYR-AQPLIN----HAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hhhhccc-------cCccC-CCchHH----hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 2211100 00000 000000 112345678899999999999999999999999998
No 27
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-44 Score=341.31 Aligned_cols=330 Identities=32% Similarity=0.496 Sum_probs=256.3
Q ss_pred CccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeee
Q 013220 23 GYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102 (447)
Q Consensus 23 ~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~ 102 (447)
|..-..+||.+. .||.+...+|+|+||.|-.|.+..++..||+|+++.-....+...-|+++|+.+....+.+---+|.
T Consensus 77 GH~v~~~gD~l~-~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~ 155 (415)
T KOG0671|consen 77 GHYVYQVGDILT-NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQ 155 (415)
T ss_pred ceEEEEeccccc-cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 444458899996 7999999999999999999999999999999999999998999999999999998766556666777
Q ss_pred ecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCC
Q 013220 103 LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTID 182 (447)
Q Consensus 103 ~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~ 182 (447)
+.+.|... .++|||+|.+|.++++++..+.+.+++...++.+.+|++++++|||+. +|+|.|+||+||++.....
T Consensus 156 m~~wFdyr----ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 156 MRDWFDYR----GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eehhhhcc----CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEeccce
Confidence 77777654 699999999999999999998888999999999999999999999995 9999999999999965321
Q ss_pred CCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCc
Q 013220 183 PSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGN 262 (447)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~ 262 (447)
-... ..+.. .... .......++|+|||.
T Consensus 231 ~~~~-------------------------------------------------~~k~~-~~~~--r~~ks~~I~vIDFGs 258 (415)
T KOG0671|consen 231 FKTY-------------------------------------------------NPKKK-VCFI--RPLKSTAIKVIDFGS 258 (415)
T ss_pred EEEe-------------------------------------------------ccCCc-ccee--ccCCCcceEEEecCC
Confidence 0000 00000 0000 012356799999999
Q ss_pred ccccccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 263 ACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 263 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
|....+..+..+.|..|+|||++.+.+++..+|+||+||||+++++|...|... ++-.++++|..++|..|...
T Consensus 259 Atf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH------en~EHLaMMerIlGp~P~~m 332 (415)
T KOG0671|consen 259 ATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH------ENLEHLAMMERILGPIPSRM 332 (415)
T ss_pred cceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC------CcHHHHHHHHHhhCCCcHHH
Confidence 988777777789999999999999999999999999999999999999999866 46678899999999999877
Q ss_pred hhCCCCccchhcccchhhhhhhcccC------chhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFW------SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
..... ...+|... ++.--...+-. .....+.....-.+.....+.|||++||.+||.+|+|+.|+|.||||+
T Consensus 333 i~r~~-~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~ 410 (415)
T KOG0671|consen 333 IKKTR-KEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFA 410 (415)
T ss_pred hhhhh-hHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhh
Confidence 54432 33344322 22110000000 001111111112234455789999999999999999999999999998
Q ss_pred cc
Q 013220 417 LR 418 (447)
Q Consensus 417 ~~ 418 (447)
..
T Consensus 411 ~~ 412 (415)
T KOG0671|consen 411 RL 412 (415)
T ss_pred cC
Confidence 64
No 28
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-42 Score=338.33 Aligned_cols=280 Identities=26% Similarity=0.464 Sum_probs=214.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||+|+||+||+|++..+++.||+|+++... .....+.+|+++++.+ .|+||+++++++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~--- 71 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL------KQENIVELKEAFRR--- 71 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC------CCccccchhhhEec---
Confidence 37999999999999999999999999999999876542 2345678899999999 78999999998874
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
....++||||+.+.+.+.+... ...+++..++.++.|++.||+|||+. ||+||||||+||++
T Consensus 72 -~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill--------------- 133 (287)
T cd07848 72 -RGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLI--------------- 133 (287)
T ss_pred -CCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE---------------
Confidence 3689999999955555555432 24589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+....++|+|||++......
T Consensus 134 ---------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 134 ---------------------------------------------------------SHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ---------------------------------------------------------cCCCcEEEeeccCcccccccccc
Confidence 33567999999999754322
Q ss_pred -cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+ ....+..+....+..+.........
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGES------EIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 223468999999999998889999999999999999999999998653 4455666777778777655432211
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.. ............... .........+.++.+||.+||+.||++|||++|+|+||||
T Consensus 231 ~~-------~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 231 NP-------RFHGLRFPAVNHPQS---LERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cc-------hhcccccCcccCccc---HHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 10 000000000000000 0011223356789999999999999999999999999998
No 29
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.1e-43 Score=337.92 Aligned_cols=286 Identities=32% Similarity=0.496 Sum_probs=228.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcce-eeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKC-VIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~-Iv~~~~~~~~~~ 111 (447)
..|...++||+|+||+||+|+...+|+.||+|.+..+.. ......+|+-+++.+ .|+| |+.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L------~~~~~iv~L~dv~~~~~ 84 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL------SHANHIVRLHDVIHTSN 84 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh------CCCcceEEEEeeeeecc
Confidence 358888899999999999999999999999998776543 345678999999999 5666 999999988652
Q ss_pred C--CcceEEEEEecccccHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 112 P--NGQHLCMVLEFLGDSLLRLIKYSRY--KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 112 ~--~~~~~~lvmE~~~~~L~~~~~~~~~--~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
. ....+++||||+..+|..++..... .+++...++.+++||+.||+|||++ +|+||||||+||++
T Consensus 85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi---------- 153 (323)
T KOG0594|consen 85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLI---------- 153 (323)
T ss_pred cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEE----------
Confidence 1 1237999999999999999976543 3688889999999999999999997 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+..+.+||+|||+|....
T Consensus 154 --------------------------------------------------------------~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 154 --------------------------------------------------------------SSSGVLKLADFGLARAFS 171 (323)
T ss_pred --------------------------------------------------------------CCCCcEeeeccchHHHhc
Confidence 446789999999997544
Q ss_pred ---cccccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 268 ---KQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 268 ---~~~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
...+..++|.+|+|||++.+. .|++.+||||+|||+++|++++..|++.+ +.+++..+++++|++.++-+
T Consensus 172 ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s------e~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 172 IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS------EIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHcCCCCccCC
Confidence 224566899999999999987 68999999999999999999999999884 78999999999999987543
Q ss_pred hCCCCccch---hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 344 IGGAQSKDY---FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 344 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.+.....++ |..+.+.. .+... .........+++.+||+.+|.+|.||+.+|.||||.....
T Consensus 246 p~v~~~~~~k~~f~~~~~~~--------~l~~~-------~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPK--------DLSSI-------LPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred CCccccccccccCcCCCCcc--------chHHh-------ccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 222211111 11111000 00100 1112257889999999999999999999999999997654
Q ss_pred C
Q 013220 421 T 421 (447)
Q Consensus 421 ~ 421 (447)
.
T Consensus 311 ~ 311 (323)
T KOG0594|consen 311 K 311 (323)
T ss_pred c
Confidence 3
No 30
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=347.35 Aligned_cols=251 Identities=29% Similarity=0.496 Sum_probs=207.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---------------hHHHHHHHHHHHHHhhcCCCCCccee
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---------------FAQAALHEIEVLSAVADGDPSNEKCV 100 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---------------~~~~~~~E~~~l~~l~~~~~~~~~~I 100 (447)
++|++.+.||+|.||.|-+|++..+++.||||++.+.+. ..+..++|+.+|+++ +|+||
T Consensus 97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl------~H~nV 170 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL------HHPNV 170 (576)
T ss_pred hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc------CCcCe
Confidence 579999999999999999999999999999999765432 134788999999999 88999
Q ss_pred eeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEee
Q 013220 101 IRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKG-LELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 101 v~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~-l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
|+++.+..+. ..+.+|||+||| .|.+...- ..+. +++.+++.+++.++.||+|||.+ |||||||||.|+|+
T Consensus 171 V~LiEvLDDP--~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl- 243 (576)
T KOG0585|consen 171 VKLIEVLDDP--ESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLL- 243 (576)
T ss_pred eEEEEeecCc--ccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEE-
Confidence 9999999876 567899999999 56553221 1233 88999999999999999999996 99999999999999
Q ss_pred ecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEe
Q 013220 179 STIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVV 258 (447)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~ 258 (447)
+..+.+||+
T Consensus 244 -----------------------------------------------------------------------~~~g~VKIs 252 (576)
T KOG0585|consen 244 -----------------------------------------------------------------------SSDGTVKIS 252 (576)
T ss_pred -----------------------------------------------------------------------cCCCcEEee
Confidence 446889999
Q ss_pred ecCcccccc--------cccccCCCCCCccChHHhhcC---CC-CccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchH
Q 013220 259 DFGNACRAN--------KQFAEEIQTRQYRAPEVILRA---GY-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDED 326 (447)
Q Consensus 259 Dfg~a~~~~--------~~~~~~~gt~~y~aPE~l~~~---~~-~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~ 326 (447)
|||.+.... ......+||+.|+|||.+.+. .+ +.+.||||+||+||+|+.|++||.+...
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~-------- 324 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE-------- 324 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--------
Confidence 999997542 123345899999999999863 23 5899999999999999999999976531
Q ss_pred HHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChh--hHHHHHHHHhhccccCCCCCC
Q 013220 327 HLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET--DAREFAEFLVPLLDFTPEKRP 404 (447)
Q Consensus 327 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ll~~~L~~dP~kRp 404 (447)
+++ .++|......+|.. +.+.+.|||.+||++||++|+
T Consensus 325 -----~~l-----------------------------------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri 364 (576)
T KOG0585|consen 325 -----LEL-----------------------------------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRI 364 (576)
T ss_pred -----HHH-----------------------------------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhhee
Confidence 111 33444444444443 688999999999999999999
Q ss_pred ChHHHhcCcccccc
Q 013220 405 TAQQCLQHPWLSLR 418 (447)
Q Consensus 405 ta~elL~hp~f~~~ 418 (447)
|+.++-.|||.+..
T Consensus 365 ~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 365 TLPDIKLHPWVTRD 378 (576)
T ss_pred ehhhheecceeccC
Confidence 99999999999865
No 31
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.7e-42 Score=348.16 Aligned_cols=307 Identities=29% Similarity=0.452 Sum_probs=226.3
Q ss_pred CccccccCccc--cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCc
Q 013220 23 GYHAVRVGDLF--NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNE 97 (447)
Q Consensus 23 ~~~~~~~g~~~--~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~ 97 (447)
+|++|.+|+-. -.++|++.+.||+|+||.||+|++..+++.||+|.+... ......+.+|+.+++.+ +|
T Consensus 2 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h 75 (355)
T cd07874 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV------NH 75 (355)
T ss_pred cceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh------CC
Confidence 57789888831 137999999999999999999999999999999987643 23345677899999998 88
Q ss_pred ceeeeecccccccCC--CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCe
Q 013220 98 KCVIRLIDHFKHAGP--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENI 175 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~~--~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Ni 175 (447)
+||+++++++..... .....++||||+++++...+.. .+++..+..++.|++.||+|||++ ||+||||||+||
T Consensus 76 ~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Ni 150 (355)
T cd07874 76 KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNI 150 (355)
T ss_pred CchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHE
Confidence 999999998865321 2346899999997777776642 378889999999999999999996 999999999999
Q ss_pred EeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccce
Q 013220 176 LLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRC 255 (447)
Q Consensus 176 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (447)
++ +.++.+
T Consensus 151 ll------------------------------------------------------------------------~~~~~~ 158 (355)
T cd07874 151 VV------------------------------------------------------------------------KSDCTL 158 (355)
T ss_pred EE------------------------------------------------------------------------CCCCCE
Confidence 99 345679
Q ss_pred eEeecCcccccccc--cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 256 KVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 256 kL~Dfg~a~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
+|+|||++...... .....+|..|+|||++.+..++.++|||||||++|+|++|+.||.+. ........+.+
T Consensus 159 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~~~~ 232 (355)
T cd07874 159 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR------DYIDQWNKVIE 232 (355)
T ss_pred EEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHH
Confidence 99999999765433 23457899999999999888999999999999999999999999765 34455566666
Q ss_pred HhCCCCHHhhhCCC-CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 334 LIGKMPRKIAIGGA-QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 334 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.++....++..... ....+.............. ...+.............+..+.+||.+||+.||++|||+.|+|+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK-LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhCCCCHHHHHhhcHHHHHHHhcCCccccccchh-hccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 66665544432211 1111111111111000000 000000000111222345678999999999999999999999999
Q ss_pred ccccccc
Q 013220 413 PWLSLRN 419 (447)
Q Consensus 413 p~f~~~~ 419 (447)
|||....
T Consensus 312 p~~~~~~ 318 (355)
T cd07874 312 PYINVWY 318 (355)
T ss_pred cchhccc
Confidence 9998553
No 32
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.8e-43 Score=348.84 Aligned_cols=250 Identities=24% Similarity=0.367 Sum_probs=208.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|.+.+.||+|+||.||+|++..+++.||+|+++... ...+.+.+|+++++.+ +|+||+++++++..
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~~~~-- 89 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL------SHPFIVNMMCSFQD-- 89 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCCCcEEEEEEc--
Confidence 67999999999999999999999999999999987653 2345678899999999 78999999998875
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
....|+||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 90 --~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll------------- 151 (329)
T PTZ00263 90 --ENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLL------------- 151 (329)
T ss_pred --CCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEE-------------
Confidence 36899999999 88998888654 3488999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+.++.++|+|||++.......
T Consensus 152 -----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 152 -----------------------------------------------------------DNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred -----------------------------------------------------------CCCCCEEEeeccCceEcCCCc
Confidence 446779999999998765555
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
...+|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+ .......
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~-------------------- 226 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT------PFRIYEK-------------------- 226 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC------HHHHHHH--------------------
Confidence 55689999999999998889999999999999999999999997542 1111111
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLR 418 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~ 418 (447)
+......++...+..+.+||.+||+.||.+||+ ++++++||||...
T Consensus 227 ----------------------i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 227 ----------------------ILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred ----------------------HhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 111122233445668899999999999999997 7999999999864
No 33
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.8e-42 Score=342.36 Aligned_cols=284 Identities=27% Similarity=0.426 Sum_probs=217.2
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC-
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP- 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~- 112 (447)
+|++.++||+|+||.||+|++..++..||+|.+... ......+.+|+++++.+ +|+||+++++++.....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------~hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL------RHPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC------CCCCEeeecceEeccCCC
Confidence 699999999999999999999999999999987643 12334678899999999 79999999998765422
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...+|+|||||+++|.+.+... ..+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 75 ~~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll--------------- 136 (338)
T cd07859 75 EFKDIYVVFELMESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILA--------------- 136 (338)
T ss_pred CCceEEEEEecCCCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEE---------------
Confidence 22468999999988898887644 3489999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+..+.+||+|||++......
T Consensus 137 ---------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 137 ---------------------------------------------------------NADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred ---------------------------------------------------------CCCCcEEEccCccccccccccCc
Confidence 44677999999998643211
Q ss_pred ---cccCCCCCCccChHHhhc--CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 270 ---FAEEIQTRQYRAPEVILR--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 270 ---~~~~~gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
....+|++.|+|||++.+ ..++.++|||||||++|+|++|+.||... +....+..+....|..+.....
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK------NVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHH
Confidence 133578999999999876 57899999999999999999999999765 3455667777778877765432
Q ss_pred CCCC--ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 345 GGAQ--SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 345 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.... ...++... ......... . .....+..+.+||.+||+.||++|||++|+|+||||+....
T Consensus 234 ~i~~~~~~~~~~~~------~~~~~~~~~----~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 234 RVRNEKARRYLSSM------RKKQPVPFS----Q---KFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HhhhhhHHHHHHhh------cccCCCchH----H---hcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 2111 00010000 000000000 0 00123567889999999999999999999999999987554
No 34
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-42 Score=339.92 Aligned_cols=285 Identities=26% Similarity=0.394 Sum_probs=213.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.++||+|+||+||+|++..+++.||+|+++... .......+|+++++.+ +|+||+++++++..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~---- 74 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL------KHANIVLLHDIIHT---- 74 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC------CCCCcCeEEEEEec----
Confidence 68999999999999999999999999999999886543 2234567899999999 78999999998875
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
....++||||+++++.+.+.... ..+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 75 ~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill---------------- 136 (303)
T cd07869 75 KETLTLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLI---------------- 136 (303)
T ss_pred CCeEEEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE----------------
Confidence 36899999999888887775432 4588999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---cc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QF 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---~~ 270 (447)
+....+||+|||.+..... ..
T Consensus 137 --------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 137 --------------------------------------------------------SDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred --------------------------------------------------------CCCCCEEECCCCcceeccCCCccC
Confidence 3356799999999864432 22
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.. .....+..+....+.............
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK-----DIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc-----cHHHHHHHHHHHhCCCChhhccchhhc
Confidence 335678999999998764 57899999999999999999999997653 334455566666665543322111110
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
. .+... .........+...+. .. ..+..+.+||.+||+.||++|||++|+|+||||+...
T Consensus 236 ~-~~~~~----~~~~~~~~~~~~~~~-~~----~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 236 P-HFKPE----RFTLYSPKNLRQAWN-KL----SYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred c-ccccc----cccccCCccHHHHhh-cc----CCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 0 00000 000000111111111 00 1245788999999999999999999999999998754
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.5e-43 Score=348.80 Aligned_cols=257 Identities=26% Similarity=0.424 Sum_probs=211.4
Q ss_pred cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
..+.|.++..||+|+||.||+|+.+.||..||+|++++... ...++..|-.+|... +.+.||+++=+|.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~------ds~~vVKLyYsFQD 212 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV------DSPWVVKLYYSFQD 212 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc------CCCcEEEEEEEecC
Confidence 34789999999999999999999999999999999887653 345788888899886 78899999999986
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. +++||||||+ ||++-.++... ..+++..++.++.+++.||..+|+. |+|||||||+|+||
T Consensus 213 ~----~~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLi----------- 274 (550)
T KOG0605|consen 213 K----EYLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLI----------- 274 (550)
T ss_pred C----CeeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheee-----------
Confidence 5 8999999999 99999988854 4599999999999999999999995 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+..+++||+|||+|.....
T Consensus 275 -------------------------------------------------------------D~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 275 -------------------------------------------------------------DAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred -------------------------------------------------------------cCCCCEeeccccccchhhh
Confidence 6688999999999832110
Q ss_pred -------------------------c-------------------------cccCCCCCCccChHHhhcCCCCccchhHh
Q 013220 269 -------------------------Q-------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWS 298 (447)
Q Consensus 269 -------------------------~-------------------------~~~~~gt~~y~aPE~l~~~~~~~~~DiwS 298 (447)
+ ....+|||-|+|||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 11127899999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhc
Q 013220 299 FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKY 378 (447)
Q Consensus 299 lGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (447)
||||||+|+.|..||.+.+..++ .+.++.- ... +
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T------~rkI~nw------------------------------------r~~----l 407 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQET------YRKIVNW------------------------------------RET----L 407 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHH------HHHHHHH------------------------------------hhh----c
Confidence 99999999999999988753322 2222211 111 1
Q ss_pred CCCh--hhHHHHHHHHhhccccCCCCCC---ChHHHhcCcccccccCCc
Q 013220 379 RFSE--TDAREFAEFLVPLLDFTPEKRP---TAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 379 ~~~~--~~~~~l~~ll~~~L~~dP~kRp---ta~elL~hp~f~~~~~~~ 422 (447)
.+|. ..+.++.|||.+||. ||++|. .++||-+||||+..+=..
T Consensus 408 ~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~ 455 (550)
T KOG0605|consen 408 KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDH 455 (550)
T ss_pred cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcch
Confidence 1222 235789999999999 999998 489999999999875333
No 36
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.6e-42 Score=344.69 Aligned_cols=306 Identities=29% Similarity=0.471 Sum_probs=228.6
Q ss_pred CCCccccccCccc--cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCC
Q 013220 21 KGGYHAVRVGDLF--NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPS 95 (447)
Q Consensus 21 ~~~~~~~~~g~~~--~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~ 95 (447)
.++|.++..|+-. ..++|++.+.||+|+||.||+|++..+++.||||.+... ......+.+|+.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------ 80 (364)
T cd07875 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV------ 80 (364)
T ss_pred cccceeeecCcchhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc------
Confidence 3467777776621 237999999999999999999999999999999987643 23345678899999998
Q ss_pred CcceeeeecccccccC--CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 96 NEKCVIRLIDHFKHAG--PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 96 ~~~~Iv~~~~~~~~~~--~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
+|+||+++++++.... ......|+||||+++++...+. ..+++..+..++.|++.||+|||++ ||+||||||+
T Consensus 81 ~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~ 155 (364)
T cd07875 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPS 155 (364)
T ss_pred CCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHH
Confidence 7899999998876432 1234689999999878877664 2378889999999999999999997 9999999999
Q ss_pred CeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc
Q 013220 174 NILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM 253 (447)
Q Consensus 174 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (447)
||++ +.+.
T Consensus 156 NIll------------------------------------------------------------------------~~~~ 163 (364)
T cd07875 156 NIVV------------------------------------------------------------------------KSDC 163 (364)
T ss_pred HEEE------------------------------------------------------------------------CCCC
Confidence 9999 3456
Q ss_pred ceeEeecCcccccccc--cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHH
Q 013220 254 RCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM 331 (447)
Q Consensus 254 ~~kL~Dfg~a~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~ 331 (447)
.++|+|||++...... .....+|..|+|||++.+..++.++|||||||++|+|++|+.||...+ .......+
T Consensus 164 ~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~~ 237 (364)
T cd07875 164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD------HIDQWNKV 237 (364)
T ss_pred cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHH
Confidence 7999999999765433 234578999999999999899999999999999999999999997663 55666677
Q ss_pred HHHhCCCCHHhhhCCCCc-cchhcccchhhhhhhcccCchhHHhhh-----hcCCChhhHHHHHHHHhhccccCCCCCCC
Q 013220 332 MELIGKMPRKIAIGGAQS-KDYFDRHGDLKRIRRLKFWSLDRLLVD-----KYRFSETDAREFAEFLVPLLDFTPEKRPT 405 (447)
Q Consensus 332 ~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~ll~~~L~~dP~kRpt 405 (447)
.+.++....++....... ..+......... ......... ........+..+.+||.+||+.||.+|||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t 311 (364)
T cd07875 238 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAG------YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311 (364)
T ss_pred HHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC------CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCC
Confidence 777777665553322211 111111110000 001111000 01111223567899999999999999999
Q ss_pred hHHHhcCcccccccCC
Q 013220 406 AQQCLQHPWLSLRNST 421 (447)
Q Consensus 406 a~elL~hp~f~~~~~~ 421 (447)
+.|+|+||||......
T Consensus 312 ~~e~L~hp~~~~~~~~ 327 (364)
T cd07875 312 VDEALQHPYINVWYDP 327 (364)
T ss_pred HHHHhcCcccccccCc
Confidence 9999999999865443
No 37
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.8e-43 Score=348.72 Aligned_cols=314 Identities=35% Similarity=0.596 Sum_probs=270.2
Q ss_pred CCCccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCccee
Q 013220 21 KGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCV 100 (447)
Q Consensus 21 ~~~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~I 100 (447)
.-||+.|.+|++|. ++|.+..-.|+|-||+|-+|.+...+..||||++..++.....-..|+++|+.|......+-.|+
T Consensus 418 aEGYYrv~igE~LD-~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 418 AEGYYRVRIGELLD-SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred ccceEEEehhhhhc-ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHH
Confidence 34899999999997 79999999999999999999999999999999999998878888999999999998887788899
Q ss_pred eeecccccccCCCcceEEEEEecccccHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeee
Q 013220 101 IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKY-SRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 101 v~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~-~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
++++.+|.+. +|+|||+|.+.-.|..+++. +..-++..+.++.++.|++.||..|-. +||+|.||||+|||+.
T Consensus 497 lrl~r~F~hk----nHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVN- 570 (752)
T KOG0670|consen 497 LRLFRHFKHK----NHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVN- 570 (752)
T ss_pred HHHHHHhhhc----ceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEec-
Confidence 9999999975 79999999998888888864 445678999999999999999999998 6999999999999994
Q ss_pred cCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEee
Q 013220 180 TIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVD 259 (447)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~D 259 (447)
+....+||||
T Consensus 571 ----------------------------------------------------------------------E~k~iLKLCD 580 (752)
T KOG0670|consen 571 ----------------------------------------------------------------------ESKNILKLCD 580 (752)
T ss_pred ----------------------------------------------------------------------cCcceeeecc
Confidence 3356789999
Q ss_pred cCcccccc-cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 260 FGNACRAN-KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 260 fg~a~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
||.|.... ...+.++-+.+|+|||++.|.+|+...|+||+||+||+|++|+..|++. ++.+.+...|++-|++
T Consensus 581 fGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~------TNN~MLrl~me~KGk~ 654 (752)
T KOG0670|consen 581 FGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR------TNNQMLRLFMELKGKF 654 (752)
T ss_pred CccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC------CcHHHHHHHHHhcCCC
Confidence 99997654 5567777889999999999999999999999999999999999999998 5888999999999999
Q ss_pred CHHhhhCCCCccchhcccchhhhhh--------------hccc-CchhHHhhhhcCCChh---hHHHHHHHHhhccccCC
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIR--------------RLKF-WSLDRLLVDKYRFSET---DAREFAEFLVPLLDFTP 400 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~---~~~~l~~ll~~~L~~dP 400 (447)
|..++.........|+.+-+.-++. +.+. ..+...+.....++.+ +..+|.+||.+||..||
T Consensus 655 p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP 734 (752)
T KOG0670|consen 655 PNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDP 734 (752)
T ss_pred cHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccCh
Confidence 9999988888887787766544322 1111 1334444444334443 45689999999999999
Q ss_pred CCCCChHHHhcCccccc
Q 013220 401 EKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 401 ~kRpta~elL~hp~f~~ 417 (447)
++|.|..|+|.||||+.
T Consensus 735 ~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 735 EKRITVNQALKHPFITE 751 (752)
T ss_pred hhcCCHHHHhcCCcccC
Confidence 99999999999999985
No 38
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-43 Score=339.06 Aligned_cols=258 Identities=29% Similarity=0.432 Sum_probs=208.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.+|...+.||+|+||+||++.+.+++..+|||..... ....+.+.+|+++|..+ .|++||++++...... .
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l------~~p~IV~~~G~~~~~~--~ 88 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL------NHPNIVQYYGSSSSRE--N 88 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC------CCCCEEeeCCcccccc--C
Confidence 5688999999999999999999999999999965443 22256789999999999 7999999999754331 1
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
..++++|||+ +|+|.+++..... .+++..++.+.+|+++||+|||++ ||+|+||||+|||+
T Consensus 89 ~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl---------------- 150 (313)
T KOG0198|consen 89 DEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILL---------------- 150 (313)
T ss_pred eeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEE----------------
Confidence 4799999999 9999999987654 699999999999999999999997 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCc-ccceeEeecCccccccc----
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANK---- 268 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~kL~Dfg~a~~~~~---- 268 (447)
+. .+.+||+|||.++....
T Consensus 151 --------------------------------------------------------~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 151 --------------------------------------------------------DPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred --------------------------------------------------------eCCCCeEEeccCcccccccccccc
Confidence 33 46799999999976552
Q ss_pred --ccccCCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 269 --QFAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 269 --~~~~~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
......||+.|+|||++.... ...++|||||||++.+|++|..||... ....+.++.+....
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--------~~~~~~~~~ig~~~------- 239 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--------FEEAEALLLIGRED------- 239 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--------cchHHHHHHHhccC-------
Confidence 123457999999999998632 335999999999999999999999642 11111122111000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
..+.+|..++.++.+||.+||..||++||||+++|+|||.+....
T Consensus 240 ------------------------------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 240 ------------------------------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ------------------------------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 112467778899999999999999999999999999999987554
No 39
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6e-42 Score=348.85 Aligned_cols=285 Identities=21% Similarity=0.337 Sum_probs=215.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
++|.+.++||+|+||.||+|++..+++.||+|.... ..+.+|+++++.+ +|+||++++++|.. ..
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l------~HpnIv~~~~~~~~----~~ 156 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAI------NHPSIIQLKGTFTY----NK 156 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhC------CCCCCCCEeEEEEE----CC
Confidence 679999999999999999999999999999996442 3467899999999 78999999999875 36
Q ss_pred eEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 116 HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 116 ~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
..++|||+++++|...+... ..+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 157 ~~~lv~e~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll------------------ 215 (391)
T PHA03212 157 FTCLILPRYKTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFI------------------ 215 (391)
T ss_pred eeEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEE------------------
Confidence 89999999988888877643 3588999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc----ccc
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFA 271 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~----~~~ 271 (447)
+....++|+|||++..... ...
T Consensus 216 ------------------------------------------------------~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 216 ------------------------------------------------------NHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred ------------------------------------------------------cCCCCEEEEeCCcccccccccccccc
Confidence 3356799999999864321 223
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCC-CCCCchHHHHHHHHHhCCCCHHhhhCCCCc-
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQ-GFCEDEDHLALMMELIGKMPRKIAIGGAQS- 349 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 349 (447)
..+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.. +......++..+.+..|..|..+.......
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 457999999999999888999999999999999999999887655322 122345677778888887775542111000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
...+................+. .....+.++.+||.+||++||++||||+|+|+||||+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWT--------NLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHH--------HHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 0000000000000000000000 011346688999999999999999999999999999864
No 40
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8e-43 Score=347.22 Aligned_cols=251 Identities=27% Similarity=0.451 Sum_probs=217.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.+|.+.+.||+|+||.||+|+.+.+.+.||+|++.+.. ...+.+.+|+++++.+ .|+||+.+++.|..+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l------kHpniv~m~esfEt~-- 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL------KHPNIVEMLESFETS-- 73 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc------CCcchhhHHHhhccc--
Confidence 47999999999999999999999999999999876543 3456788999999999 899999999999854
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
.++|+|.|||.|+|+.++... +.++++.++.++++++.||.|||++ +|+|||+||.||++
T Consensus 74 --~~~~vVte~a~g~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl--------------- 133 (808)
T KOG0597|consen 74 --AHLWVVTEYAVGDLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILL--------------- 133 (808)
T ss_pred --ceEEEEehhhhhhHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeee---------------
Confidence 799999999966999988754 5599999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+..+.+|+||||+|+.+...
T Consensus 134 ---------------------------------------------------------~~~~~~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 134 ---------------------------------------------------------EKGGTLKLCDFGLARAMSTNTSV 156 (808)
T ss_pred ---------------------------------------------------------cCCCceeechhhhhhhcccCcee
Confidence 66788999999999866543
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.+..-||+.|||||...+.+|+..+|+|||||++|+++.|+.||...+ +..+
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s----------i~~L------------------ 208 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS----------ITQL------------------ 208 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH----------HHHH------------------
Confidence 233469999999999999999999999999999999999999996542 1111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.+.|..++...|.+.+..|+.||..+|++||.+|+|=.+++.|||++.+.
T Consensus 209 --------------------v~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 209 --------------------VKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred --------------------HHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 23344455556778899999999999999999999999999999998653
No 41
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.9e-42 Score=332.11 Aligned_cols=282 Identities=27% Similarity=0.447 Sum_probs=212.2
Q ss_pred CceEEEEeecccCceEEEEEEeCC-CCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTR-TSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.++||+|+||.||+|++.. ++..||+|.++... .......+|+++++.+... .|+||+++++++....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~hpniv~~~~~~~~~~ 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF---EHPNVVRLFDVCTVSR 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc---CCCCcceEEEEEeccc
Confidence 479999999999999999999854 47889999876432 2233566788888777432 6999999999875432
Q ss_pred -CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 -PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 -~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
.....+++||||++++|.+.+.......+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 78 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~------------- 143 (290)
T cd07862 78 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILV------------- 143 (290)
T ss_pred CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEE-------------
Confidence 134579999999988898888655445689999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+..+.++|+|||++......
T Consensus 144 -----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T cd07862 144 -----------------------------------------------------------TSSGQIKLADFGLARIYSFQM 164 (290)
T ss_pred -----------------------------------------------------------cCCCCEEEccccceEeccCCc
Confidence 33567999999998654322
Q ss_pred -cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH-hhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK-IAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 347 (447)
.....|+..|+|||.+.+..++.++|||||||++|+|++|..||.+. ++...+..+....+..... +.....
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 165 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS------SDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCC------CHHHHHHHHHHHhCCCChhhchhhhc
Confidence 23346899999999999888999999999999999999999999866 3556666777666654432 111100
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.....+... ....+.. +....+..+.+||.+||+.||++|||+.|+|+||||
T Consensus 239 ~~~~~~~~~---------~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 239 LPRQAFHSK---------SAQPIEK-------FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ccchhccCC---------CCCCHHH-------HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 000000000 0000111 112346678899999999999999999999999998
No 42
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.8e-41 Score=329.68 Aligned_cols=281 Identities=28% Similarity=0.461 Sum_probs=213.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC-C
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG-P 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~-~ 112 (447)
+|++.+.||+|+||+||+|++..+++.||+|.++... .......+|+++++.+.+. +|+||+++++++.... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF---DHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc---CCCCeeeeeeeeccccCC
Confidence 5999999999999999999999999999999876432 1233566788888887543 6999999999876532 2
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
.....+++|||+.+++..++.......+++..++.++.|++.||+|||+. ||+||||||+||++
T Consensus 78 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili--------------- 141 (288)
T cd07863 78 RETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILV--------------- 141 (288)
T ss_pred CCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE---------------
Confidence 34679999999977888887654445589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--c
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--F 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~ 270 (447)
+....++|+|||++...... .
T Consensus 142 ---------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd07863 142 ---------------------------------------------------------TSGGQVKLADFGLARIYSCQMAL 164 (288)
T ss_pred ---------------------------------------------------------CCCCCEEECccCccccccCcccC
Confidence 33567999999998754422 2
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC-CCCc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG-GAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~ 349 (447)
....++..|+|||++.+..++.++|||||||++|+|++|..||... .....+..+....+.....-... ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 165 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN------SEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred CCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC------CHHHHHHHHHHHhCCCChhhCccccccc
Confidence 3456789999999999888999999999999999999999999755 34556666666666554322110 0000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...+. ........ .....+++.+.+||.+||+.||++|||+.|+|.||||
T Consensus 239 ~~~~~---------~~~~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 239 RGAFS---------PRGPRPVQ-------SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccC---------CCCCCchH-------HhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00000 00000000 0112346678999999999999999999999999998
No 43
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.3e-41 Score=331.42 Aligned_cols=256 Identities=28% Similarity=0.366 Sum_probs=205.3
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
|++.+.||+|+||+||+|.+..+++.||+|.+.... .....+.+|+++++.+ +|++|+++++++..
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l------~~~~iv~~~~~~~~---- 71 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV------NSRFVVSLAYAYET---- 71 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc------CCCcEEEEEEEEcc----
Confidence 889999999999999999999999999999876543 2233567899999999 78899999998875
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
.+..++||||+ +++|...+.......+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 72 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill--------------- 135 (285)
T cd05631 72 KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILL--------------- 135 (285)
T ss_pred CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEE---------------
Confidence 36899999999 78888776543334588999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--cc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QF 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~~ 270 (447)
+....++|+|||++..... ..
T Consensus 136 ---------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05631 136 ---------------------------------------------------------DDRGHIRISDLGLAVQIPEGETV 158 (285)
T ss_pred ---------------------------------------------------------CCCCCEEEeeCCCcEEcCCCCee
Confidence 3356799999999875432 22
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....|+..|+|||++.+..++.++|||||||++|+|++|+.||...... .....+...+.
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~------~~~~~~~~~~~-------------- 218 (285)
T cd05631 159 RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER------VKREEVDRRVK-------------- 218 (285)
T ss_pred cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc------hhHHHHHHHhh--------------
Confidence 3457899999999999889999999999999999999999999765321 11111111110
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccccC
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS 420 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~~~ 420 (447)
.....++...+..+.+||++||+.||++||+ ++++++||||...+.
T Consensus 219 ------------------------~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 219 ------------------------EDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred ------------------------cccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 0111233445678999999999999999997 899999999998653
No 44
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.6e-41 Score=350.92 Aligned_cols=286 Identities=25% Similarity=0.377 Sum_probs=217.9
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC---
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG--- 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~--- 111 (447)
.++|++.+.||+|+||+||+|.+..+++.||||.+.... ....+|+.+++.+ .|+||++++++|....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l------~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNL------NHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhc------CCCCCcceeeeEeeccccc
Confidence 368999999999999999999999999999999775432 2345799999999 7899999988765422
Q ss_pred -CCcceEEEEEecccccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 112 -PNGQHLCMVLEFLGDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 112 -~~~~~~~lvmE~~~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
.....+++||||+++++...+... ....+++..++.++.||+.||+|||++ ||+||||||+||++..
T Consensus 136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~--------- 205 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDP--------- 205 (440)
T ss_pred CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcC---------
Confidence 123468899999987887766532 234588999999999999999999996 9999999999999932
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc-
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN- 267 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~- 267 (447)
....+||+|||++....
T Consensus 206 --------------------------------------------------------------~~~~vkL~DFGla~~~~~ 223 (440)
T PTZ00036 206 --------------------------------------------------------------NTHTLKLCDFGSAKNLLA 223 (440)
T ss_pred --------------------------------------------------------------CCCceeeeccccchhccC
Confidence 12468999999997543
Q ss_pred -cccccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 268 -KQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 268 -~~~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+. .....+..+.+.+|.++.+....
T Consensus 224 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~------~~~~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 224 GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQ------SSVDQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHHH
Confidence 223345789999999998765 6899999999999999999999999876 35667777888888877554321
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
... .|.... ........+.. .++...+.++.+||.+||+.||.+|||+.|+|+||||+....
T Consensus 298 ~~~---~~~~~~----~~~~~~~~l~~------~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 298 MNP---NYADIK----FPDVKPKDLKK------VFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred hch---hhhccc----CCccCchhHHH------HhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 110 000000 00000000111 134455678999999999999999999999999999987654
No 45
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-43 Score=326.35 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=205.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc-cccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLID-HFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~-~~~~~~ 111 (447)
..|++.++||.|+||.||++++..++..||.|-++.. ....+....|+.+|+.| +|||||++++ .|..
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL------~HpNIVqYy~~~f~~-- 90 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL------NHPNIVQYYAHSFIE-- 90 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc------CCchHHHHHHHhhhc--
Confidence 5699999999999999999999999999999976644 34467888999999999 8999999999 5554
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhC-C--cccccCCCCCeEeeecCCCCC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHREL-G--IIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~-g--IiH~Dikp~Nill~~~~~~~~ 185 (447)
+..-++||||+| .|+|...+.+.+ .+.++++.+..++.|++.||..||++. . |.||||||.||++
T Consensus 91 -~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl-------- 161 (375)
T KOG0591|consen 91 -DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL-------- 161 (375)
T ss_pred -cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE--------
Confidence 234599999999 899999887643 345999999999999999999999821 4 8899999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
+.++.+||+|||+++.
T Consensus 162 ----------------------------------------------------------------~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 162 ----------------------------------------------------------------TANGVVKLGDFGLGRF 177 (375)
T ss_pred ----------------------------------------------------------------cCCCceeeccchhHhH
Confidence 4467899999999976
Q ss_pred ccc---ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 266 ANK---QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 266 ~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
.+. .....+|||+||+||.+.+.+|++++||||+||++|+|..-+.||.+.. ...+..-++- |.
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-------~~~L~~KI~q-gd----- 244 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-------LLSLCKKIEQ-GD----- 244 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-------HHHHHHHHHc-CC-----
Confidence 553 3455799999999999999999999999999999999999999998762 1111111110 00
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC-hhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS-ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
-++.| .-.+..+..+|.-|+..||+.||+. +|++.+..+.
T Consensus 245 ----------------------------------~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~~~ 285 (375)
T KOG0591|consen 245 ----------------------------------YPPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQSE 285 (375)
T ss_pred ----------------------------------CCCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHHHH
Confidence 01133 3457889999999999999999986 6666655543
No 46
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-42 Score=343.52 Aligned_cols=258 Identities=29% Similarity=0.457 Sum_probs=215.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
..|.+.+.||.|.||.||+|+++.+++.+|+|++.+... ....+.+|+++|+.+. .|+||+.++++|...
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~-----~hpniv~l~~~~e~~- 108 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS-----GHPNIVQLKDAFEDP- 108 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc-----CCCCEEEEEEEEEcC-
Confidence 689999999999999999999999999999998876653 3468999999999995 499999999999965
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
..+++|||+| |+.|++.+... .+++..+..++.|++.|++|||+. ||+|||+||+|+|+....
T Consensus 109 ---~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~--------- 172 (382)
T KOG0032|consen 109 ---DSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKD--------- 172 (382)
T ss_pred ---CeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeecccc---------
Confidence 6999999999 89999988765 389999999999999999999995 999999999999995421
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-- 268 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~-- 268 (447)
+....++++|||++.....
T Consensus 173 -----------------------------------------------------------~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 173 -----------------------------------------------------------EGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred -----------------------------------------------------------CCCCcEEEeeCCCceEccCCc
Confidence 1135799999999986654
Q ss_pred ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....+||+.|+|||++.+.+|+..+||||+||++|.|+.|..||.+.+..+ ....+.+ |.. ..
T Consensus 194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~------~~~~i~~--~~~--------~f 257 (382)
T KOG0032|consen 194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE------IFLAILR--GDF--------DF 257 (382)
T ss_pred eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH------HHHHHHc--CCC--------CC
Confidence 4455699999999999999999999999999999999999999998874221 1111111 100 00
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
.. ..-..++..+.+||++||..||.+|+||.++|+|||++..
T Consensus 258 ~~----------------------------~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 258 TS----------------------------EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CC----------------------------CCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 11 1123457899999999999999999999999999999975
No 47
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.8e-42 Score=342.33 Aligned_cols=245 Identities=28% Similarity=0.445 Sum_probs=200.2
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..+++.||+|+++... .....+.+|+++++.+ .|+||++++..+.. ...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~----~~~~ 70 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT------RHPFLTALKYSFQT----HDRL 70 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCCCEEEEEEc----CCEE
Confidence 36899999999999999999999999987543 2234677899999988 78999999988874 4689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+||++
T Consensus 71 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll------------------- 128 (323)
T cd05571 71 CFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLML------------------- 128 (323)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEE-------------------
Confidence 9999999 88898877643 4589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+..+.++|+|||++.... ......
T Consensus 129 -----------------------------------------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 129 -----------------------------------------------------DKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred -----------------------------------------------------CCCCCEEEeeCCCCcccccCCCcccce
Confidence 345679999999986432 222345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+||+.|+|||++.+..++.++|||||||++|+|++|..||...+ .......
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~----------------------- 206 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFEL----------------------- 206 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC------HHHHHHH-----------------------
Confidence 78999999999998889999999999999999999999996542 1111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
+......++...+.++.+||.+||+.||++|| ++.++++||||+...
T Consensus 207 -------------------~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 207 -------------------ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred -------------------HHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 11112234455677899999999999999999 899999999998753
No 48
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.8e-41 Score=339.23 Aligned_cols=302 Identities=31% Similarity=0.489 Sum_probs=230.1
Q ss_pred CccccccCccc--cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCc
Q 013220 23 GYHAVRVGDLF--NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNE 97 (447)
Q Consensus 23 ~~~~~~~g~~~--~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~ 97 (447)
+||||.+|+.. -.++|++.+.||+|+||.||+|++..++..||+|.+... ......+.+|+++++.+ +|
T Consensus 1 ~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h 74 (353)
T cd07850 1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV------NH 74 (353)
T ss_pred CceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc------CC
Confidence 69999999932 137999999999999999999999999999999987532 23345677899999999 78
Q ss_pred ceeeeecccccccC--CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCe
Q 013220 98 KCVIRLIDHFKHAG--PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENI 175 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~--~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Ni 175 (447)
+||++++++|.... .+....|+||||++++|...+.. .+++..+..++.|++.||+|||++ ||+||||||+||
T Consensus 75 ~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Ni 149 (353)
T cd07850 75 KNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNI 149 (353)
T ss_pred CCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHE
Confidence 99999999886432 13346899999998888877653 278899999999999999999996 999999999999
Q ss_pred EeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccce
Q 013220 176 LLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRC 255 (447)
Q Consensus 176 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (447)
++ +....+
T Consensus 150 l~------------------------------------------------------------------------~~~~~~ 157 (353)
T cd07850 150 VV------------------------------------------------------------------------KSDCTL 157 (353)
T ss_pred EE------------------------------------------------------------------------CCCCCE
Confidence 99 345679
Q ss_pred eEeecCccccccccc--ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 256 KVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 256 kL~Dfg~a~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
+|+|||.+....... ....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ .......+..
T Consensus 158 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~------~~~~~~~~~~ 231 (353)
T cd07850 158 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD------HIDQWNKIIE 231 (353)
T ss_pred EEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHH
Confidence 999999997654322 23467889999999999889999999999999999999999997653 4556777777
Q ss_pred HhCCCCHHhhhCCCCccchh-cccchhhhhhhcccCchhHHhhhh------cCCChhhHHHHHHHHhhccccCCCCCCCh
Q 013220 334 LIGKMPRKIAIGGAQSKDYF-DRHGDLKRIRRLKFWSLDRLLVDK------YRFSETDAREFAEFLVPLLDFTPEKRPTA 406 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~ll~~~L~~dP~kRpta 406 (447)
.+|..+.++..........+ ........ ..+....... ...+...+..+.+||.+||+.||++|||+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 305 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAG------YSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISV 305 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCC------cchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCH
Confidence 88887776643332222111 11110000 0011110000 00122346788999999999999999999
Q ss_pred HHHhcCccccccc
Q 013220 407 QQCLQHPWLSLRN 419 (447)
Q Consensus 407 ~elL~hp~f~~~~ 419 (447)
+|+|.||||+.+.
T Consensus 306 ~eiL~~~~~~~~~ 318 (353)
T cd07850 306 DDALQHPYINVWY 318 (353)
T ss_pred HHHhcChhHhhcc
Confidence 9999999987543
No 49
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.5e-42 Score=341.55 Aligned_cols=251 Identities=25% Similarity=0.347 Sum_probs=206.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCC-eEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~-~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
++|++.+.||+|+||.||+|.+..++ ..||+|++.... ...+.+.+|+++++.+ +|+||+++++++..
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~Iv~~~~~~~~- 102 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI------NHPFCVNLYGSFKD- 102 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC------CCCCCcceEEEEEe-
Confidence 67999999999999999999876554 789999876542 2345678899999999 78999999999875
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
....|+||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ ||+||||||+|||+
T Consensus 103 ---~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl------------ 164 (340)
T PTZ00426 103 ---ESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLL------------ 164 (340)
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEE------------
Confidence 36899999999 88999888654 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+..+.++|+|||++......
T Consensus 165 ------------------------------------------------------------~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 165 ------------------------------------------------------------DKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred ------------------------------------------------------------CCCCCEEEecCCCCeecCCC
Confidence 34567999999999766555
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+||+.|+|||++.+..++.++|+|||||++|+|++|..||...+ .......+.
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~----------------- 241 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE------PLLIYQKIL----------------- 241 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC------HHHHHHHHh-----------------
Confidence 555689999999999998889999999999999999999999997542 111111111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
.....++...+..+.++|++||+.||++|+ |++++++||||....
T Consensus 242 -------------------------~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 242 -------------------------EGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred -------------------------cCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 111123344566789999999999999995 899999999998654
No 50
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.4e-41 Score=336.21 Aligned_cols=285 Identities=29% Similarity=0.488 Sum_probs=219.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||.|+||+||+|.+..++..||+|.+.... .....+.+|+++++.+ .|+||+++++++.....
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~ 88 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM------KHENVIGLLDVFTPATS 88 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc------CCCchhhhhhhhccccc
Confidence 68999999999999999999999999999999876432 2345677899999999 78999999998864321
Q ss_pred --CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 113 --NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 113 --~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
.....|++|++++++|...+.. ..+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 89 ~~~~~~~~~~~~~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~------------- 151 (343)
T cd07878 89 IENFNEVYLVTNLMGADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAV------------- 151 (343)
T ss_pred ccccCcEEEEeecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEE-------------
Confidence 2246899999999999877653 3489999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+.+..+||+|||++.......
T Consensus 152 -----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~ 172 (343)
T cd07878 152 -----------------------------------------------------------NEDCELRILDFGLARQADDEM 172 (343)
T ss_pred -----------------------------------------------------------CCCCCEEEcCCccceecCCCc
Confidence 345679999999998776666
Q ss_pred ccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
...++|+.|+|||++.+ ..++.++|||||||++|+|++|..||... +....+..+.+..+..+..+.......
T Consensus 173 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 173 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN------DYIDQLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence 66789999999999987 46889999999999999999999999765 345566667777776665543211100
Q ss_pred c--chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 350 K--DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 350 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
. .+.. .........+... ....++.+.+||.+||+.||++|||++|+|+||||......
T Consensus 247 ~~~~~~~------~~~~~~~~~~~~~-------~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 247 HARKYIQ------SLPHMPQQDLKKI-------FRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred hHHHHhh------ccccccchhHHHh-------ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCC
Confidence 0 0000 0000000000110 11234568899999999999999999999999999976543
No 51
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-42 Score=337.39 Aligned_cols=253 Identities=26% Similarity=0.483 Sum_probs=220.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
|=|.+.+-||+|.|+.|-+|++.-+|+.||||++.+.+ ....+++.|+++|+.+ .|||||++|.+..
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV------QHpNiVRLYEViD---- 87 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV------QHPNIVRLYEVID---- 87 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh------cCcCeeeeeehhc----
Confidence 56999999999999999999999999999999987654 3345889999999999 7999999999986
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
++-.+|+|+|.= +|+|+++++... .+++++.++.+++||+.|+.|||+ +.+||||+||+|+++..
T Consensus 88 TQTKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFE------------ 153 (864)
T KOG4717|consen 88 TQTKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFE------------ 153 (864)
T ss_pred ccceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEee------------
Confidence 446899999988 789999998755 579999999999999999999999 69999999999999843
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc--ccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA--NKQ 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~--~~~ 269 (447)
.-+-+||.|||++... ++.
T Consensus 154 -----------------------------------------------------------KlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 154 -----------------------------------------------------------KLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred -----------------------------------------------------------ecCceEeeeccccccCCCcch
Confidence 3467999999999654 355
Q ss_pred cccCCCCCCccChHHhhcCCCC-ccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRAGYS-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~-~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.+..||+..|.|||++.+..|+ +++||||||||||+|+.|+.||... ++...+.+|+..
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA------NDSETLTmImDC-------------- 234 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA------NDSETLTMIMDC-------------- 234 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc------cchhhhhhhhcc--------------
Confidence 6778999999999999999886 8999999999999999999999876 344455555543
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.+..|.-++.++++||..||..||.+|.+.++|..|+|++...
T Consensus 235 ----------------------------KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 235 ----------------------------KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred ----------------------------cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 3346778899999999999999999999999999999999765
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.8e-41 Score=336.39 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=208.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.++||+|+||.||+|++..+++.||+|+++... .....+.+|+++++.+ .|+||+++++++..
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~iv~~~~~~~~-- 72 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT------KSEWLVKLLYAFQD-- 72 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC------CCCCCccEEEEEEc--
Confidence 47999999999999999999999999999999987653 2345677899999988 78999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+...|+||||+ +++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||++
T Consensus 73 --~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~------------- 134 (333)
T cd05600 73 --DEYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLI------------- 134 (333)
T ss_pred --CCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEE-------------
Confidence 46899999999 88999988643 3588999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.+||+|||++.......
T Consensus 135 -----------------------------------------------------------~~~~~~kL~Dfg~a~~~~~~~ 155 (333)
T cd05600 135 -----------------------------------------------------------DASGHIKLTDFGLSKGIVTYA 155 (333)
T ss_pred -----------------------------------------------------------CCCCCEEEEeCcCCccccccc
Confidence 345679999999997665555
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
...+||+.|+|||++.+..++.++|||||||++|+|++|..||...+ .......+..........
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~--------- 220 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST------PNETWENLKYWKETLQRP--------- 220 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC------HHHHHHHHHhccccccCC---------
Confidence 56689999999999998899999999999999999999999997542 111111111100000000
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.+ . ......+.++.+||.+||..+|.+||+++++++||||+...
T Consensus 221 -~~----------------------~--~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~ 264 (333)
T cd05600 221 -VY----------------------D--DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD 264 (333)
T ss_pred -CC----------------------C--ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence 00 0 00013466889999999999999999999999999999753
No 53
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.9e-42 Score=329.77 Aligned_cols=300 Identities=25% Similarity=0.320 Sum_probs=213.8
Q ss_pred ccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHh----HHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 31 DLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF----AQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 31 ~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
..++-+.|++.++||.|.-|+||+|+...++..||+|++.+.... ......|-+||+++ +||.+..+|..
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l------DHPFlPTLYa~ 145 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL------DHPFLPTLYAS 145 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc------CCCccchhhhe
Confidence 344457899999999999999999999999999999998876533 34667799999999 89999999999
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecC----
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTI---- 181 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~---- 181 (447)
|.. .++.|++|||| ||+|..+......+.++++.++.++..++.||+|||- +|||.|||||+||||....
T Consensus 146 fet----~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvredGHIML 220 (459)
T KOG0610|consen 146 FET----DKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVREDGHIML 220 (459)
T ss_pred eec----cceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEecCCcEEe
Confidence 985 48999999999 9999999988888889999999999999999999999 6999999999999995540
Q ss_pred ---CCCCC-cccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcc-CCCccccee
Q 013220 182 ---DPSKD-PIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERC-LDGIDMRCK 256 (447)
Q Consensus 182 ---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~k 256 (447)
+.... .+.+.+.....+.. . ........ +-+++...- ......+-|
T Consensus 221 sDFDLS~~~~~~Pt~~~s~~~~~-~--------------------------~~~~~~~~--~~~s~f~~r~~~~~~~~~k 271 (459)
T KOG0610|consen 221 SDFDLSLRCPVSPTLVKSSSPRS-S--------------------------GSQPSCRS--RQPSCFSPRCLSSSKKRKK 271 (459)
T ss_pred eeccccccCCCCCeeeccCCCCC-C--------------------------CCCccccc--ccccccccchhcccccccc
Confidence 00000 11111100000000 0 00000000 001111100 000000000
Q ss_pred EeecCcc--------cccccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHH
Q 013220 257 VVDFGNA--------CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHL 328 (447)
Q Consensus 257 L~Dfg~a--------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~ 328 (447)
.|.+.. .+.+-.-..++||-.|+|||++.|...+.++|.|+|||.+|+|+.|..||.+.+..++
T Consensus 272 -~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T------- 343 (459)
T KOG0610|consen 272 -KDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET------- 343 (459)
T ss_pred -ccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-------
Confidence 222211 0111112235899999999999999999999999999999999999999998864433
Q ss_pred HHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh--hhHHHHHHHHhhccccCCCCCCC-
Q 013220 329 ALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE--TDAREFAEFLVPLLDFTPEKRPT- 405 (447)
Q Consensus 329 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ll~~~L~~dP~kRpt- 405 (447)
+..++...+.++. +++.+++|||+++|.+||.+|+-
T Consensus 344 -----------------------------------------l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 344 -----------------------------------------LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred -----------------------------------------HHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhcc
Confidence 2233333333333 56789999999999999999998
Q ss_pred ---hHHHhcCccccccc
Q 013220 406 ---AQQCLQHPWLSLRN 419 (447)
Q Consensus 406 ---a~elL~hp~f~~~~ 419 (447)
|+||=+||||+..+
T Consensus 383 ~rGA~eIK~HpFF~gVn 399 (459)
T KOG0610|consen 383 KRGAAEIKRHPFFEGVN 399 (459)
T ss_pred ccchHHhhcCccccCCC
Confidence 99999999999764
No 54
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2e-41 Score=334.59 Aligned_cols=243 Identities=29% Similarity=0.435 Sum_probs=198.6
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||+|+||+||+|++..+++.||+|+++... .....+..|+++++.+ +|+||+++++.+.. ....|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~----~~~~~l 70 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV------NCPFIVPLKFSFQS----PEKLYL 70 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCcEeceeeEEec----CCeEEE
Confidence 699999999999999999999999886532 2345677899999988 88999999998874 368999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 71 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili--------------------- 126 (312)
T cd05585 71 VLAFINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILL--------------------- 126 (312)
T ss_pred EEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEE---------------------
Confidence 99999 88998888653 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQ 275 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~~g 275 (447)
+..+.++|+|||++.... ......+|
T Consensus 127 ---------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 155 (312)
T cd05585 127 ---------------------------------------------------DYQGHIALCDFGLCKLNMKDDDKTNTFCG 155 (312)
T ss_pred ---------------------------------------------------CCCCcEEEEECcccccCccCCCccccccC
Confidence 445679999999986432 12233578
Q ss_pred CCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcc
Q 013220 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 355 (447)
Q Consensus 276 t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (447)
|+.|+|||++.+..++.++|||||||++|+|++|..||...+ .....
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~------~~~~~--------------------------- 202 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN------VNEMY--------------------------- 202 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC------HHHHH---------------------------
Confidence 999999999999889999999999999999999999997542 11111
Q ss_pred cchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC---ChHHHhcCccccccc
Q 013220 356 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP---TAQQCLQHPWLSLRN 419 (447)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp---ta~elL~hp~f~~~~ 419 (447)
..+......++...+..+.+||.+||+.||++|| ++.++|+||||....
T Consensus 203 ---------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 203 ---------------RKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred ---------------HHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 1111122234455677899999999999999997 589999999999763
No 55
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.2e-40 Score=328.95 Aligned_cols=293 Identities=26% Similarity=0.362 Sum_probs=206.8
Q ss_pred EEeecccCceEEEEEEeC--CCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEE
Q 013220 41 QRKLGWGQFSIVWLAYDT--RTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLC 118 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~ 118 (447)
.++||+|+||+||+|++. .+++.||+|.+..... .....+|+++++.+ +|+||+++++.|... .+...+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l------~h~niv~~~~~~~~~--~~~~~~ 76 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLREL------KHPNVISLQKVFLSH--ADRKVW 76 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhc------CCCCCcceeeeEecC--CCcEEE
Confidence 357999999999999865 4678999998865432 34577899999999 789999999988654 346799
Q ss_pred EEEecccccHHHHHHhhc-------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 119 MVLEFLGDSLLRLIKYSR-------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 119 lvmE~~~~~L~~~~~~~~-------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
++|||+++++..++.... ...+++..++.++.||+.||+|||++ ||+||||||+|||+....
T Consensus 77 lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~---------- 145 (317)
T cd07868 77 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEG---------- 145 (317)
T ss_pred EEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCC----------
Confidence 999999888888775322 12478899999999999999999996 999999999999994311
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
.....+||+|||++......
T Consensus 146 ----------------------------------------------------------~~~~~~kl~DfG~a~~~~~~~~ 167 (317)
T cd07868 146 ----------------------------------------------------------PERGRVKIADMGFARLFNSPLK 167 (317)
T ss_pred ----------------------------------------------------------CCcCcEEEeecCceeccCCCCc
Confidence 22457999999999754432
Q ss_pred ----cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCC---CCchHHHHHHHHHhCCCCHH
Q 013220 270 ----FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGF---CEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~g~~~~~ 341 (447)
....++|+.|+|||++.+. .++.++||||+||++|+|++|..||........ ......+..+....|..+..
T Consensus 168 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (317)
T cd07868 168 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK 247 (317)
T ss_pred cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChH
Confidence 2234689999999999874 578999999999999999999999976542211 12345666777777766543
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
................+.... ..........+... .......+.+||.+||++||++|||++|+|+||||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 248 DWEDIKKMPEHSTLMKDFRRN-TYTNCSLIKYMEKH---KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhHHHhhccchhhhhhhhhcc-ccCcccccchHHhc---CCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 321111100000000000000 00000011111110 01123467899999999999999999999999998
No 56
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-40 Score=328.42 Aligned_cols=283 Identities=28% Similarity=0.464 Sum_probs=217.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.+|.+.++||+|+||+||+|++..++..||+|.++... .....+.+|+++++.+ +|+||+++++++..
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~---- 75 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL------KHANIVTLHDIVHT---- 75 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC------CCCCcceEEEEEee----
Confidence 57999999999999999999999999999999876432 2234567899999999 78999999999875
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
....++||||+++++.+.+.... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill---------------- 137 (309)
T cd07872 76 DKSLTLVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLI---------------- 137 (309)
T ss_pred CCeEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE----------------
Confidence 36899999999778887765432 3478899999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||++...... .
T Consensus 138 --------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 138 --------------------------------------------------------NERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred --------------------------------------------------------CCCCCEEECccccceecCCCcccc
Confidence 33567999999998654322 2
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+. .++.++|||||||++|+|++|+.||... +....+..+.+.++..+..........
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGS------TVEDELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence 234678999999998764 5789999999999999999999999766 355677788888887776543222211
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
..+.. . ....+ ....... ....++.++.+||.+||+.||++|||++|+|+||||+....
T Consensus 236 ~~~~~-~------~~~~~-~~~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 236 DEFKN-Y------NFPKY-KPQPLIN----HAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred hhhhh-h------hcCcc-CCCchhh----hccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 11100 0 00000 0000000 11234668899999999999999999999999999997543
No 57
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-42 Score=318.00 Aligned_cols=255 Identities=30% Similarity=0.471 Sum_probs=209.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---------HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
..|.-.+.||.|..++|-+|.+..++..+|+|++.... ...+....|+.+|+.+. +||+|+++.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-----GHP~II~l~D~ 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-----GHPYIIDLQDV 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-----CCCcEEEeeee
Confidence 46888899999999999999999999999999865321 33456778999999997 99999999999
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
|... ..+++|+|.| .|.|++.+...- .++++.++.+|+|+++|+.|||.+ +|||||+||+|||+
T Consensus 92 yes~----sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILl-------- 156 (411)
T KOG0599|consen 92 YESD----AFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILL-------- 156 (411)
T ss_pred ccCc----chhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheee--------
Confidence 9854 6899999999 899999987654 499999999999999999999997 99999999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
+.+.+++|+|||+++.
T Consensus 157 ----------------------------------------------------------------ddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 157 ----------------------------------------------------------------DDNMNIKISDFGFACQ 172 (411)
T ss_pred ----------------------------------------------------------------ccccceEEeccceeec
Confidence 5578999999999987
Q ss_pred ccc--ccccCCCCCCccChHHhhc------CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCC
Q 013220 266 ANK--QFAEEIQTRQYRAPEVILR------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK 337 (447)
Q Consensus 266 ~~~--~~~~~~gt~~y~aPE~l~~------~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~ 337 (447)
... .....|||+.|.|||.+.- ..|+..+|+|++||+||.|+.|+.||... .....+.++++ |+
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR------kQmlMLR~Ime--Gk 244 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR------KQMLMLRMIME--GK 244 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHh--cc
Confidence 653 3456699999999999862 24788999999999999999999999754 12333333332 11
Q ss_pred CCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 338 MPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
.. ...+ --.+++....|||++||+.||++|+|++|+|+||||.+
T Consensus 245 yq--------F~sp----------------------------eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 245 YQ--------FRSP----------------------------EWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred cc--------cCCc----------------------------chhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 10 0000 01244778899999999999999999999999999964
Q ss_pred c
Q 013220 418 R 418 (447)
Q Consensus 418 ~ 418 (447)
.
T Consensus 289 ~ 289 (411)
T KOG0599|consen 289 I 289 (411)
T ss_pred H
Confidence 3
No 58
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.8e-41 Score=335.80 Aligned_cols=254 Identities=24% Similarity=0.434 Sum_probs=205.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|.+.+.||+|+||+||+|++..+++.||+|+++... .....+..|++++..+ .|++|++++.++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~-- 72 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA------DSPWIVKLYYSFQD-- 72 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc------CCCCccchhhheec--
Confidence 47999999999999999999999999999999987653 2345678899999998 79999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+.+.++||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. ||+||||||+||++
T Consensus 73 --~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll------------- 134 (350)
T cd05573 73 --EEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILI------------- 134 (350)
T ss_pred --CCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEE-------------
Confidence 46899999999 88999888654 4589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.++|+|||++.......
T Consensus 135 -----------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 135 -----------------------------------------------------------DADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred -----------------------------------------------------------CCCCCEEeecCCCCccCcccC
Confidence 445679999999986543221
Q ss_pred --------------------------------ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCC
Q 013220 271 --------------------------------AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSG 318 (447)
Q Consensus 271 --------------------------------~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~ 318 (447)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~- 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT- 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-
Confidence 23468999999999999999999999999999999999999997653
Q ss_pred CCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhcccc
Q 013220 319 QGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDF 398 (447)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~ 398 (447)
.......+....... ..+.....++.+.+||.+||.
T Consensus 235 -----~~~~~~~i~~~~~~~--------------------------------------~~p~~~~~~~~~~~li~~ll~- 270 (350)
T cd05573 235 -----LQETYNKIINWKESL--------------------------------------RFPPDPPVSPEAIDLICRLLC- 270 (350)
T ss_pred -----HHHHHHHHhccCCcc--------------------------------------cCCCCCCCCHHHHHHHHHHcc-
Confidence 111111111100000 000111246789999999997
Q ss_pred CCCCCCC-hHHHhcCccccccc
Q 013220 399 TPEKRPT-AQQCLQHPWLSLRN 419 (447)
Q Consensus 399 dP~kRpt-a~elL~hp~f~~~~ 419 (447)
||.+||+ ++++|+||||+...
T Consensus 271 dp~~R~~s~~~ll~hp~~~~~~ 292 (350)
T cd05573 271 DPEDRLGSFEEIKSHPFFKGID 292 (350)
T ss_pred ChhhcCCCHHHHhcCCCcCCCC
Confidence 9999999 99999999998753
No 59
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-42 Score=317.60 Aligned_cols=261 Identities=27% Similarity=0.409 Sum_probs=219.6
Q ss_pred CceEEEEe-ecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRK-LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~-lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+.|.+..+ ||-|-.|.|-.|.++.+++.||+|++.... ..++|+++.-+.. .|+|||.++++|.+...+.
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s-----~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMAS-----GHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhc-----CCCceEEeehhhhhhccCc
Confidence 56777655 899999999999999999999999887554 4678999888875 8999999999999998888
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
.++.+|||.| ||.|++.+.......|.++++..|+.||..|+.|||+ ++|.||||||+|+|++.+
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t------------- 197 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTT------------- 197 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecC-------------
Confidence 9999999999 9999999987777789999999999999999999999 599999999999999664
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--cccc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFA 271 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--~~~~ 271 (447)
..+..+||+|||+|+... ....
T Consensus 198 --------------------------------------------------------~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 198 --------------------------------------------------------SPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred --------------------------------------------------------CCCcceEecccccccccCCCcccc
Confidence 345679999999998655 3445
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
..+.|++|.|||++-...|+..+|+||+||+||-|+.|..||...-.... +...-
T Consensus 222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai--spgMk----------------------- 276 (400)
T KOG0604|consen 222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPGMK----------------------- 276 (400)
T ss_pred CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC--ChhHH-----------------------
Confidence 56889999999999877899999999999999999999999987643221 11111
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCCh----hhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE----TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.+|....+.||. .++++..|+|+++|..+|++|.|++++++|||+....
T Consensus 277 -------------------~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 277 -------------------RRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred -------------------hHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 122223333333 5689999999999999999999999999999998754
No 60
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.4e-41 Score=331.82 Aligned_cols=251 Identities=25% Similarity=0.360 Sum_probs=202.2
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+|++.+.||+|+||.||+|++..+++.||+|++.... ...+.+..|.+++..+. +|++|+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~--- 72 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-----KPPFLTQLHSCFQT--- 72 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC-----CCCceeeeEEEEEc---
Confidence 4899999999999999999999999999999887543 23456777888888774 45678888888874
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.+.+|+||||+ +++|...+... ..+++..+..++.||+.||+|||++ ||+||||||+|||+
T Consensus 73 -~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill-------------- 134 (324)
T cd05587 73 -MDRLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVML-------------- 134 (324)
T ss_pred -CCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEE--------------
Confidence 36899999999 88998887643 3488999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---c
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---K 268 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~ 268 (447)
+..+.++|+|||++.... .
T Consensus 135 ----------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 135 ----------------------------------------------------------DAEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred ----------------------------------------------------------cCCCCEEEeecCcceecCCCCC
Confidence 345679999999986421 2
Q ss_pred ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+ .......+.
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~---------------- 214 (324)
T cd05587 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQSIM---------------- 214 (324)
T ss_pred ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHH----------------
Confidence 2234578999999999999889999999999999999999999997542 111111111
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-----HHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta-----~elL~hp~f~~~~ 419 (447)
.....++...+..+.+||.+||+.||.+|+++ +++++||||...+
T Consensus 215 --------------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~ 264 (324)
T cd05587 215 --------------------------EHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID 264 (324)
T ss_pred --------------------------cCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 11122344456788999999999999999986 8999999998653
No 61
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7e-41 Score=332.38 Aligned_cols=251 Identities=25% Similarity=0.421 Sum_probs=202.5
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
|++.+.||+|+||.||+|.+..+++.||||+++... ...+.+..|.+++..+... .|+||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l---~hp~i~~~~~~~~~---- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSE---RHPFLVNLFACFQT---- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcccc---CCCChhceeeEEEc----
Confidence 788999999999999999999999999999987543 2234667777777665432 79999999999874
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...|+||||+ +++|...+.. ..+++..+..++.||+.||+|||+. ||+||||||+||++
T Consensus 74 ~~~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill--------------- 134 (324)
T cd05589 74 EDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLL--------------- 134 (324)
T ss_pred CCEEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEE---------------
Confidence 46899999999 7888776643 3589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQ 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~ 269 (447)
+.++.+||+|||++.... ..
T Consensus 135 ---------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05589 135 ---------------------------------------------------------DTEGFVKIADFGLCKEGMGFGDR 157 (324)
T ss_pred ---------------------------------------------------------CCCCcEEeCcccCCccCCCCCCc
Confidence 445679999999886432 22
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+|++.|+|||.+.+..++.++|||||||++|+|++|..||...+ .......
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~------~~~~~~~------------------- 212 (324)
T cd05589 158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD------EEEVFDS------------------- 212 (324)
T ss_pred ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC------HHHHHHH-------------------
Confidence 334578999999999998889999999999999999999999997542 1111111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
+......++...+..+.+||.+||+.||.+|| ++.++++||||+...
T Consensus 213 -----------------------i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 213 -----------------------IVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred -----------------------HHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 11112224445577889999999999999999 799999999998753
No 62
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2e-40 Score=334.47 Aligned_cols=252 Identities=22% Similarity=0.381 Sum_probs=199.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|+++++.+ +|++|+++++.+..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~------~~~~iv~~~~~~~~-- 72 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA------DSLWVVKMFYSFQD-- 72 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC------CCCCcceEEEEEec--
Confidence 36999999999999999999999999999999987543 2345677899999988 78999999998875
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+|+||||| +++|.+.+... ..+++..++.++.|++.||+|||++ ||+||||||+|||+
T Consensus 73 --~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi------------- 134 (363)
T cd05628 73 --KLNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLL------------- 134 (363)
T ss_pred --CCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEE-------------
Confidence 36899999999 88999888654 4589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+..+.++|+|||++......
T Consensus 135 -----------------------------------------------------------~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 135 -----------------------------------------------------------DSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred -----------------------------------------------------------CCCCCEEEeeccCcccccccc
Confidence 34567999999998643210
Q ss_pred -------------------------------------cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCC
Q 013220 270 -------------------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312 (447)
Q Consensus 270 -------------------------------------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~P 312 (447)
....+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 1234799999999999998999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh--hhHHHHHH
Q 013220 313 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE--TDAREFAE 390 (447)
Q Consensus 313 f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 390 (447)
|.+.+ .......+..... ...++. .+++++.+
T Consensus 236 f~~~~------~~~~~~~i~~~~~----------------------------------------~~~~p~~~~~s~~~~~ 269 (363)
T cd05628 236 FCSET------PQETYKKVMNWKE----------------------------------------TLIFPPEVPISEKAKD 269 (363)
T ss_pred CCCCC------HHHHHHHHHcCcC----------------------------------------cccCCCcCCCCHHHHH
Confidence 97542 1111111111000 000111 23567889
Q ss_pred HHhhccccCCC---CCCChHHHhcCccccccc
Q 013220 391 FLVPLLDFTPE---KRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 391 ll~~~L~~dP~---kRpta~elL~hp~f~~~~ 419 (447)
||.+|+. +|. .||+++|+++||||+...
T Consensus 270 li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~ 300 (363)
T cd05628 270 LILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD 300 (363)
T ss_pred HHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence 9998765 444 458999999999998753
No 63
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.6e-40 Score=327.59 Aligned_cols=290 Identities=21% Similarity=0.338 Sum_probs=210.8
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.++|++.++||+|+||.||+|++..++..||+|++... ......+.+|+++++.+ +|+||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~-- 75 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC------NSPYIVGFYGAFYSD-- 75 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC------CCCCCCeEEEEEEEC--
Confidence 47899999999999999999999999999999987653 23356788999999999 789999999998753
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...++||||+ +++|.+++... ..+++..+..++.|++.||+|||++.+|+||||||+||++
T Consensus 76 --~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~-------------- 137 (331)
T cd06649 76 --GEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV-------------- 137 (331)
T ss_pred --CEEEEEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE--------------
Confidence 6899999999 88999888654 3488999999999999999999985369999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-c
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-F 270 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-~ 270 (447)
+....++|+|||++...... .
T Consensus 138 ----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~ 159 (331)
T cd06649 138 ----------------------------------------------------------NSRGEIKLCDFGVSGQLIDSMA 159 (331)
T ss_pred ----------------------------------------------------------cCCCcEEEccCccccccccccc
Confidence 33567999999998654332 3
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC---
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA--- 347 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--- 347 (447)
....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...+ ... +...++...........
T Consensus 160 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPD-------AKE---LEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------HHH---HHHHhcccccccccCCcccc
Confidence 34578999999999998889999999999999999999999997543 111 22222221110000000
Q ss_pred --Ccc---chhcccchhhhhhhccc-CchhHHhhhh-cCC-ChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 348 --QSK---DYFDRHGDLKRIRRLKF-WSLDRLLVDK-YRF-SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 348 --~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
... ......+... ...... ...+.+.... ... ....+.++.+||.+||+.||++|||++|+|+||||+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDS-RPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred Cccccccccccccccccc-ccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 000 0000000000 000000 0011111111 111 113567899999999999999999999999999998654
No 64
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-40 Score=335.52 Aligned_cols=284 Identities=29% Similarity=0.472 Sum_probs=216.5
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.|++.++||+|+||+||+|++..+++.||+|.+... ......+.+|+++++.+ .|+||+++++++......
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF------KHDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC------CCCCcCCHhheecCCCcc
Confidence 478899999999999999999999999999987542 23345788899999998 789999999998764211
Q ss_pred -cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 -GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 -~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...+|+||||++++|...+... ..+++..++.++.||+.||+|||+. ||+||||||+||++
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili--------------- 136 (372)
T cd07853 75 PFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLV--------------- 136 (372)
T ss_pred ccceEEEEeeccccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEE---------------
Confidence 1378999999988888877543 3589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+..+.++|+|||++......
T Consensus 137 ---------------------------------------------------------~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 137 ---------------------------------------------------------NSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred ---------------------------------------------------------CCCCCEEeccccceeecccCccc
Confidence 44567999999998654322
Q ss_pred -cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||.+.+. .++.++|||||||++|+|++|+.||... +....+..+.+.+|..+........
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ------SPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC------CHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 2334678999999999875 4789999999999999999999999766 3566778888888877654321110
Q ss_pred -CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 348 -QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 348 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
.....+... ...... ...........++++.+||.+||+.||++|||++|+|+||||+..
T Consensus 234 ~~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 234 EGARAHILRG-------PHKPPS----LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHHHHHhC-------CCCCCc----hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 000000000 000000 001111233446788999999999999999999999999999874
No 65
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-40 Score=336.02 Aligned_cols=252 Identities=23% Similarity=0.402 Sum_probs=202.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.+|++.+.||+|+||+||+|++..+++.||||+++... .....+.+|+++++.+ +|+||+++++.|..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l------~h~~iv~~~~~~~~-- 72 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA------DNPWVVKLYYSFQD-- 72 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceEEEEEc--
Confidence 36999999999999999999999999999999987543 3345677899999998 79999999999885
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+.+.|+||||| +++|.+++... ..+++..++.++.|++.||+|||++ ||+||||||+|||+
T Consensus 73 --~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~------------- 134 (364)
T cd05599 73 --ENYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLL------------- 134 (364)
T ss_pred --CCeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEE-------------
Confidence 47899999999 88998888654 3589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+.++.++|+|||++......
T Consensus 135 -----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 135 -----------------------------------------------------------DAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred -----------------------------------------------------------CCCCCEEEeecccceeccccc
Confidence 44677999999988543210
Q ss_pred ----------------------------------------cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhC
Q 013220 270 ----------------------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 309 (447)
Q Consensus 270 ----------------------------------------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g 309 (447)
....+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 0123689999999999988899999999999999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC--hhhHHH
Q 013220 310 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS--ETDARE 387 (447)
Q Consensus 310 ~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 387 (447)
..||...+ .......+... . ....++ ...+++
T Consensus 236 ~~Pf~~~~------~~~~~~~i~~~----~------------------------------------~~~~~~~~~~~s~~ 269 (364)
T cd05599 236 YPPFCSDN------PQETYRKIINW----K------------------------------------ETLQFPDEVPLSPE 269 (364)
T ss_pred CCCCCCCC------HHHHHHHHHcC----C------------------------------------CccCCCCCCCCCHH
Confidence 99997552 11111111100 0 000011 123568
Q ss_pred HHHHHhhccccCCCCCCC---hHHHhcCccccccc
Q 013220 388 FAEFLVPLLDFTPEKRPT---AQQCLQHPWLSLRN 419 (447)
Q Consensus 388 l~~ll~~~L~~dP~kRpt---a~elL~hp~f~~~~ 419 (447)
+.+||.+||. +|.+|++ ++|+|+||||+...
T Consensus 270 ~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~ 303 (364)
T cd05599 270 AKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD 303 (364)
T ss_pred HHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 8899999996 9999998 99999999998653
No 66
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.8e-41 Score=333.27 Aligned_cols=244 Identities=28% Similarity=0.444 Sum_probs=198.6
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..++..||+|++.... .....+.+|+++++.+ .|++|++++..+.. ...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~~~~----~~~~ 70 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT------RHPFLTSLKYSFQT----KDRL 70 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceEEEEEc----CCEE
Confidence 36899999999999999999999999887542 2345677899999888 78999999988874 4689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+|||+
T Consensus 71 ~lv~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll------------------- 128 (328)
T cd05593 71 CFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLML------------------- 128 (328)
T ss_pred EEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEE-------------------
Confidence 9999999 88888777543 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---ccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---~~~~~ 273 (447)
+..+.+||+|||++..... .....
T Consensus 129 -----------------------------------------------------~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 129 -----------------------------------------------------DKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred -----------------------------------------------------CCCCcEEEecCcCCccCCCcccccccc
Confidence 3456799999999864321 22335
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+||+.|+|||++.+..++.++|||||||++|+|++|..||...+ .......
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~------~~~~~~~----------------------- 206 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFEL----------------------- 206 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC------HHHHHHH-----------------------
Confidence 78999999999998889999999999999999999999996542 1111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCcccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLR 418 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~ 418 (447)
+......++...+..+.+||.+||+.||++|+ ++.|+++||||...
T Consensus 207 -------------------~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 207 -------------------ILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred -------------------hccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 11112224455677899999999999999997 89999999999864
No 67
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.4e-42 Score=328.03 Aligned_cols=248 Identities=25% Similarity=0.422 Sum_probs=211.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.||.+.+.||+|+||.|-+|+....|+.||||.+++++ ...-.+.+|++++..| +||||+.+|.+|...
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL------NHPhII~IyEVFENk- 125 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL------NHPHIIQIYEVFENK- 125 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc------CCCceeehhhhhcCC-
Confidence 68999999999999999999998999999999888764 3344788999999999 999999999999854
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+.+.|||||. +|.|++++.... .+++.+++.+++||+.|+.|||.+ +++|||+|.+|||+
T Consensus 126 ---dKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILL------------- 186 (668)
T KOG0611|consen 126 ---DKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILL------------- 186 (668)
T ss_pred ---ceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheee-------------
Confidence 8999999999 999999998654 499999999999999999999997 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--c
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--K 268 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--~ 268 (447)
+.++++|++|||++..+. .
T Consensus 187 -----------------------------------------------------------D~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 187 -----------------------------------------------------------DQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred -----------------------------------------------------------cCCCCeeeeccchhhhhcccc
Confidence 667899999999996554 3
Q ss_pred ccccCCCCCCccChHHhhcCCC-CccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGY-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
....+||++-|.+||++.+.+| ++.+|-|||||+||.|+.|.+||.+.+ ....+.++.
T Consensus 208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D------hk~lvrQIs--------------- 266 (668)
T KOG0611|consen 208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD------HKRLVRQIS--------------- 266 (668)
T ss_pred HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch------HHHHHHHhh---------------
Confidence 4567899999999999999999 589999999999999999999998764 111111111
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
... -...+.+..+.-||+.||..||++|.|+.++..|=|+.-
T Consensus 267 ---------------------------~Ga-YrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 267 ---------------------------RGA-YREPETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred ---------------------------ccc-ccCCCCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 000 112233556778999999999999999999999988764
No 68
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.8e-41 Score=331.29 Aligned_cols=246 Identities=27% Similarity=0.429 Sum_probs=198.2
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||+||+|++..+++.||+|+++... .....+..|.+++..+. +|++|+++++++.. ...+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~~~~~~----~~~~ 71 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHPFLTQLYCCFQT----PDRL 71 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-----CCCchhceeeEEEc----CCEE
Confidence 36899999999999999999999999887543 22345667888877664 79999999999875 4689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~iv~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli------------------- 129 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLL------------------- 129 (320)
T ss_pred EEEEcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEE-------------------
Confidence 9999999 78888877644 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+....++|+|||++.... ......
T Consensus 130 -----------------------------------------------------~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (320)
T cd05590 130 -----------------------------------------------------DHEGHCKLADFGMCKEGIFNGKTTSTF 156 (320)
T ss_pred -----------------------------------------------------CCCCcEEEeeCCCCeecCcCCCccccc
Confidence 345679999999986432 223345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
.||+.|+|||++.+..++.++|||||||++|+|++|..||...+ .......+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i---------------------- 208 (320)
T cd05590 157 CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAI---------------------- 208 (320)
T ss_pred ccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHH----------------------
Confidence 78999999999998889999999999999999999999997542 11111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh------HHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA------QQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta------~elL~hp~f~~~~ 419 (447)
......++...+.++.+||.+||+.||++||++ +++++||||+...
T Consensus 209 --------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~ 260 (320)
T cd05590 209 --------------------LNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD 260 (320)
T ss_pred --------------------hcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence 111112333456788999999999999999998 9999999998653
No 69
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.1e-40 Score=335.16 Aligned_cols=254 Identities=23% Similarity=0.364 Sum_probs=198.9
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.|++.++||+|+||+||+|++..+++.||+|++.... .....+.+|+++++.+ +|++|+++++++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l------~h~~iv~l~~~~~~--- 72 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA------DNEWVVKLYYSFQD--- 72 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc------CCCCeeeeEEEEec---
Confidence 6999999999999999999999999999999886543 2345688899999998 78999999999885
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...+|+||||+ +++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||+
T Consensus 73 -~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili-------------- 134 (381)
T cd05626 73 -KDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILI-------------- 134 (381)
T ss_pred -CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEE--------------
Confidence 36899999999 88998888654 3488999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--- 268 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--- 268 (447)
+..+.++|+|||++.....
T Consensus 135 ----------------------------------------------------------~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 135 ----------------------------------------------------------DLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred ----------------------------------------------------------CCCCCEEEeeCcCCcccccccc
Confidence 3356799999998642110
Q ss_pred -----------------------------------------------ccccCCCCCCccChHHhhcCCCCccchhHhHHH
Q 013220 269 -----------------------------------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301 (447)
Q Consensus 269 -----------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGv 301 (447)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 001246899999999999888999999999999
Q ss_pred HHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC
Q 013220 302 TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS 381 (447)
Q Consensus 302 il~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (447)
++|+|++|..||...+ .......+........ ....
T Consensus 237 il~elltG~~Pf~~~~------~~~~~~~i~~~~~~~~--------------------------------------~~~~ 272 (381)
T cd05626 237 ILFEMLVGQPPFLAPT------PTETQLKVINWENTLH--------------------------------------IPPQ 272 (381)
T ss_pred HHHHHHhCCCCCcCCC------HHHHHHHHHccccccC--------------------------------------CCCC
Confidence 9999999999997652 1111111110000000 0011
Q ss_pred hhhHHHHHHHHhhccc--cCCCCCCChHHHhcCccccccc
Q 013220 382 ETDAREFAEFLVPLLD--FTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 382 ~~~~~~l~~ll~~~L~--~dP~kRpta~elL~hp~f~~~~ 419 (447)
..++.++.+||.+||. .+|..|++++++++||||+...
T Consensus 273 ~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~ 312 (381)
T cd05626 273 VKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVD 312 (381)
T ss_pred CCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCC
Confidence 1346688899999654 4555599999999999998643
No 70
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.2e-40 Score=335.69 Aligned_cols=252 Identities=24% Similarity=0.379 Sum_probs=199.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.++||+|+||+||+|++..+++.||+|++.... .....+.+|+++++.+ +|+||++++++|..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~iv~~~~~~~~-- 72 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES------DSPWVVSLYYSFQD-- 72 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC------CCCCcceEEEEEEc--
Confidence 36999999999999999999999999999999876543 2345678899999888 88999999999875
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
..++|+||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. ||+||||||+|||+
T Consensus 73 --~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll------------- 134 (377)
T cd05629 73 --AQYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILI------------- 134 (377)
T ss_pred --CCeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEE-------------
Confidence 46899999999 88999888643 4589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+....++|+|||++......
T Consensus 135 -----------------------------------------------------------~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 135 -----------------------------------------------------------DRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred -----------------------------------------------------------CCCCCEEEeeccccccccccc
Confidence 33567999999988421100
Q ss_pred -------------------------------------------------cccCCCCCCccChHHhhcCCCCccchhHhHH
Q 013220 270 -------------------------------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 300 (447)
Q Consensus 270 -------------------------------------------------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlG 300 (447)
....+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0124689999999999988899999999999
Q ss_pred HHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCC
Q 013220 301 CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRF 380 (447)
Q Consensus 301 vil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (447)
|++|+|++|..||...+ .......+... .. ...+
T Consensus 236 vil~elltG~~Pf~~~~------~~~~~~~i~~~----~~------------------------------------~~~~ 269 (377)
T cd05629 236 AIMFECLIGWPPFCSEN------SHETYRKIINW----RE------------------------------------TLYF 269 (377)
T ss_pred hhhhhhhcCCCCCCCCC------HHHHHHHHHcc----CC------------------------------------ccCC
Confidence 99999999999996542 11111111110 00 0001
Q ss_pred C--hhhHHHHHHHHhhccccCCCCC---CChHHHhcCccccccc
Q 013220 381 S--ETDAREFAEFLVPLLDFTPEKR---PTAQQCLQHPWLSLRN 419 (447)
Q Consensus 381 ~--~~~~~~l~~ll~~~L~~dP~kR---pta~elL~hp~f~~~~ 419 (447)
+ ...+.++.+||.+||+ +|.+| +|+.|+++||||+..+
T Consensus 270 p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~ 312 (377)
T cd05629 270 PDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVD 312 (377)
T ss_pred CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 1 1235688899999997 77775 5999999999998643
No 71
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-40 Score=332.41 Aligned_cols=289 Identities=24% Similarity=0.296 Sum_probs=208.2
Q ss_pred cccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 32 ~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.+....|++.+.||+|+||.||+|++..++..||+|+.... ....|+.+++.+ +|+||+++++++...
T Consensus 62 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l------~h~~iv~~~~~~~~~- 129 (357)
T PHA03209 62 VVASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNV------NHPSVIRMKDTLVSG- 129 (357)
T ss_pred hhhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhC------CCCCCcChhheEEeC-
Confidence 44456799999999999999999999999999999975433 235689999998 789999999998753
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...++|||++.++|.+++.... ..+++..+..++.||+.||+|||+. ||+||||||+||++
T Consensus 130 ---~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill-------------- 190 (357)
T PHA03209 130 ---AITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFI-------------- 190 (357)
T ss_pred ---CeeEEEEEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE--------------
Confidence 6899999999888888775432 4589999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--c
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--Q 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~ 269 (447)
+....++|+|||.+..... .
T Consensus 191 ----------------------------------------------------------~~~~~~kl~DfG~a~~~~~~~~ 212 (357)
T PHA03209 191 ----------------------------------------------------------NDVDQVCIGDLGAAQFPVVAPA 212 (357)
T ss_pred ----------------------------------------------------------CCCCCEEEecCccccccccCcc
Confidence 3356799999999864322 2
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCC----CCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQG----FCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
.....||..|+|||++.+..++.++|||||||++|+|+++..|+....... .......+..+...++..|..+...
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 213 FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 234568999999999998889999999999999999998655544332111 0122334445555556555544211
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
... .......+........+...... .....+..+.+||.+||+.||++||||+|+|+||||+.
T Consensus 293 ~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 293 PGS--RLVRGFIEYASLERQPYTRYPCF------QRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred Ccc--HHHHHHHhhcccCCCcccccHHH------hccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 000 00000000000000000000000 01123557778999999999999999999999999985
No 72
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-40 Score=331.01 Aligned_cols=245 Identities=27% Similarity=0.442 Sum_probs=199.0
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..++..||+|+++... .....+.+|+++++.+ .|+||+++++.|... ..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~i~~~~~~~~~~----~~~ 70 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT------RHPFLTALKYAFQTH----DRL 70 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCcceeeEEecC----CEE
Confidence 36899999999999999999999999887543 2334567799999988 789999999988753 689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+||++
T Consensus 71 ~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll------------------- 128 (323)
T cd05595 71 CFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLML------------------- 128 (323)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEE-------------------
Confidence 9999999 88888777543 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---ccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---~~~~~ 273 (447)
+....++|+|||++..... .....
T Consensus 129 -----------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 129 -----------------------------------------------------DKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred -----------------------------------------------------cCCCCEEecccHHhccccCCCCccccc
Confidence 3456799999998864321 22335
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
.|++.|+|||++.+..++.++|||||||++|+|++|..||...+ .......
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~----------------------- 206 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFEL----------------------- 206 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC------HHHHHHH-----------------------
Confidence 68999999999998889999999999999999999999996542 1111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
+......++...++++.+||.+||+.||++|+ ++.++++||||....
T Consensus 207 -------------------~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 207 -------------------ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred -------------------HhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 11112234455677899999999999999998 899999999998643
No 73
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-41 Score=307.81 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=219.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|.+.+.||.|.||.||+|+.+.++-.||+|++.+.. ...+++.+|+++...| .||||+++|++|.+.
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L------~hpnilrlY~~fhd~- 94 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL------RHPNILRLYGYFHDS- 94 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc------CCccHHhhhhheecc-
Confidence 68999999999999999999999999999999876654 2345788888888888 899999999999976
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...|+++||. .|.++..+...+...+++..+..+++|++.||.|||.+ ++|||||||+|+|+
T Consensus 95 ---~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLl------------- 157 (281)
T KOG0580|consen 95 ---KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLL------------- 157 (281)
T ss_pred ---ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhcc-------------
Confidence 7899999999 89999999877777799999999999999999999997 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc-cc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-KQ 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~-~~ 269 (447)
...+.+|++|||.+.... ..
T Consensus 158 -----------------------------------------------------------g~~~~lkiAdfGwsV~~p~~k 178 (281)
T KOG0580|consen 158 -----------------------------------------------------------GSAGELKIADFGWSVHAPSNK 178 (281)
T ss_pred -----------------------------------------------------------CCCCCeeccCCCceeecCCCC
Confidence 446789999999997553 34
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....|||.-|.+||+..+..++..+|+|++|++.|+++.|..||...+.. ..
T Consensus 179 R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~------et---------------------- 230 (281)
T KOG0580|consen 179 RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS------ET---------------------- 230 (281)
T ss_pred ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH------HH----------------------
Confidence 45679999999999999999999999999999999999999999765311 11
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
..++..-+..+|+.++..+.|+|.+||..+|.+|.+..|++.|||+...
T Consensus 231 --------------------YkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 231 --------------------YKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred --------------------HHHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 2333344455778889999999999999999999999999999999743
No 74
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.2e-40 Score=327.69 Aligned_cols=255 Identities=26% Similarity=0.372 Sum_probs=201.4
Q ss_pred ceEEEEeecccCceEEEEEEeC---CCCeEEEEEEechhH-----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDT---RTSSYVALKIQKSAA-----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
+|++.++||+|+||+||++++. .++..||+|++.... ...+.+..|+++++.+. +|++|++++..+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-----QSPFLVTLHYAFQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCcccEEEEEe
Confidence 4899999999999999999764 468999999886532 23446778999998885 6899999998887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
. ...+++||||+ +++|.+.+... ..+++..+..++.||+.||+|||++ ||+||||||+|||+
T Consensus 76 ~----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili---------- 138 (332)
T cd05614 76 T----EAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILL---------- 138 (332)
T ss_pred c----CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEE----------
Confidence 4 36899999999 88998887643 3489999999999999999999996 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+.++.++|+|||++....
T Consensus 139 --------------------------------------------------------------~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 139 --------------------------------------------------------------DSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred --------------------------------------------------------------CCCCCEEEeeCcCCcccc
Confidence 345679999999986432
Q ss_pred c----ccccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 268 K----QFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 268 ~----~~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
. .....+||..|+|||++.+. .++.++|||||||++|+|++|..||....... .... +.
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~---~~---------- 220 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN---TQSE---VS---------- 220 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC---CHHH---HH----------
Confidence 1 12234789999999999875 47889999999999999999999996542111 0000 00
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSL 417 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~ 417 (447)
..+....+.++...+..+.+||.+||+.||++|| +++++++||||+.
T Consensus 221 ----------------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 221 ----------------------------RRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred ----------------------------HHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 0111112234455677899999999999999999 7889999999987
Q ss_pred cc
Q 013220 418 RN 419 (447)
Q Consensus 418 ~~ 419 (447)
..
T Consensus 273 ~~ 274 (332)
T cd05614 273 LD 274 (332)
T ss_pred CC
Confidence 53
No 75
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.3e-40 Score=335.01 Aligned_cols=253 Identities=25% Similarity=0.394 Sum_probs=200.1
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+|.+.++||+|+||+||+|++..+++.||+|++.... .....+.+|+++++.+ +|++|+++++.|..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~------~h~~iv~~~~~~~~--- 72 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA------DNEWVVRLYYSFQD--- 72 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC------CCCcCCeEEEEEEe---
Confidence 6999999999999999999999999999999887543 2345788899999998 78999999999875
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+..+|+||||| +++|.+.+... ..+++..++.++.||+.||+|||+. ||+||||||+|||+
T Consensus 73 -~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl-------------- 134 (382)
T cd05625 73 -KDNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILI-------------- 134 (382)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE--------------
Confidence 36899999999 88998888653 3588999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--- 268 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--- 268 (447)
+..+.++|+|||++.....
T Consensus 135 ----------------------------------------------------------~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 135 ----------------------------------------------------------DRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred ----------------------------------------------------------CCCCCEEEeECCCCcccccccc
Confidence 4456799999998642100
Q ss_pred -----------------------------------------------ccccCCCCCCccChHHhhcCCCCccchhHhHHH
Q 013220 269 -----------------------------------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 301 (447)
Q Consensus 269 -----------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGv 301 (447)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 001236899999999999889999999999999
Q ss_pred HHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC
Q 013220 302 TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS 381 (447)
Q Consensus 302 il~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (447)
++|+|++|..||...+ ... ....++..... ...+..
T Consensus 237 il~elltG~~Pf~~~~------~~~---~~~~i~~~~~~-----------------------------------~~~p~~ 272 (382)
T cd05625 237 ILYEMLVGQPPFLAQT------PLE---TQMKVINWQTS-----------------------------------LHIPPQ 272 (382)
T ss_pred HHHHHHhCCCCCCCCC------HHH---HHHHHHccCCC-----------------------------------cCCCCc
Confidence 9999999999997653 111 11111100000 000011
Q ss_pred hhhHHHHHHHHhhccccCCCCCCC---hHHHhcCccccccc
Q 013220 382 ETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHPWLSLRN 419 (447)
Q Consensus 382 ~~~~~~l~~ll~~~L~~dP~kRpt---a~elL~hp~f~~~~ 419 (447)
..+++++.++|.+|+ .+|++|++ ++++++||||+...
T Consensus 273 ~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 312 (382)
T cd05625 273 AKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID 312 (382)
T ss_pred ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence 234668889999986 59999997 99999999998754
No 76
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.7e-40 Score=328.08 Aligned_cols=251 Identities=25% Similarity=0.358 Sum_probs=202.2
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+|.+.+.||+|+||.||+|++..++..||+|+++... ........|.+++..+. +|++|+++++++..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~--- 72 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-----KPPFLTQLHSCFQT--- 72 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCeEeeEEEEEec---
Confidence 4889999999999999999999999999999887643 22334566777776664 68899999998874
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.+.+|+||||+ +++|...+... ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 73 -~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill-------------- 134 (323)
T cd05616 73 -MDRLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVML-------------- 134 (323)
T ss_pred -CCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEE--------------
Confidence 36899999999 88998877643 3489999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---c
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---K 268 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~ 268 (447)
+....++|+|||++.... .
T Consensus 135 ----------------------------------------------------------~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 135 ----------------------------------------------------------DSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred ----------------------------------------------------------CCCCcEEEccCCCceecCCCCC
Confidence 445679999999986432 2
Q ss_pred ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+ .......+.
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~------~~~~~~~i~---------------- 214 (323)
T cd05616 157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIM---------------- 214 (323)
T ss_pred ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC------HHHHHHHHH----------------
Confidence 2234578999999999999899999999999999999999999997542 111111111
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-----HHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta-----~elL~hp~f~~~~ 419 (447)
.....++...+.++.+||.+||+.||++|+++ .++++||||+..+
T Consensus 215 --------------------------~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 215 --------------------------EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred --------------------------hCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 11222344557789999999999999999984 8999999998653
No 77
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.7e-40 Score=328.75 Aligned_cols=246 Identities=28% Similarity=0.443 Sum_probs=196.7
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..+++.||+|+++... ........|.+++.... +|++|+++++.+.. ..++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~----~~~~ 71 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW-----ENPFLTHLYCTFQT----KEHL 71 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc-----CCCCccCeeEEEEe----CCEE
Confidence 46899999999999999999999999987653 22345666777776543 78999999999875 3689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~------------------- 129 (316)
T cd05620 72 FFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVML------------------- 129 (316)
T ss_pred EEEECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEE-------------------
Confidence 9999999 88898877643 3488999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc---ccccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~---~~~~~~~ 273 (447)
+..+.++|+|||++... .......
T Consensus 130 -----------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (316)
T cd05620 130 -----------------------------------------------------DRDGHIKIADFGMCKENVFGDNRASTF 156 (316)
T ss_pred -----------------------------------------------------CCCCCEEeCccCCCeecccCCCceecc
Confidence 34567999999998632 2223445
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+||..|+|||++.+..++.++|||||||++|+|++|..||...+ .......+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~------~~~~~~~~---------------------- 208 (316)
T cd05620 157 CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD------EDELFESI---------------------- 208 (316)
T ss_pred CCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHH----------------------
Confidence 78999999999999899999999999999999999999997542 11111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-HHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-QQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta-~elL~hp~f~~~~ 419 (447)
....+.++...+.++.+||.+||+.||++||++ +++++||||....
T Consensus 209 --------------------~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 209 --------------------RVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred --------------------HhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 011112333456688999999999999999998 5888999998764
No 78
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.5e-40 Score=329.61 Aligned_cols=245 Identities=27% Similarity=0.406 Sum_probs=198.0
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..+++.||+|+++... ...+.+..|.+++..+. +|++|++++++|... ...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~i~~~~~~~~~~----~~~ 71 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-----KHPFLTALHCCFQTK----DRL 71 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcC----CeE
Confidence 36899999999999999999999999987643 23345667888887664 799999999998753 689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill------------------- 129 (321)
T cd05591 72 FFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILL------------------- 129 (321)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEE-------------------
Confidence 9999999 88888777644 3588999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+.++.++|+|||++.... ......
T Consensus 130 -----------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05591 130 -----------------------------------------------------DAEGHCKLADFGMCKEGILNGVTTTTF 156 (321)
T ss_pred -----------------------------------------------------CCCCCEEEeecccceecccCCcccccc
Confidence 445679999999986432 222345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+|+..|+|||++.+..++.++|||||||++|+|++|+.||...+ .......+.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~------~~~~~~~i~--------------------- 209 (321)
T cd05591 157 CGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN------EDDLFESIL--------------------- 209 (321)
T ss_pred ccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC------HHHHHHHHH---------------------
Confidence 68999999999998889999999999999999999999997552 111111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-------ChHHHhcCcccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-------TAQQCLQHPWLSLR 418 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-------ta~elL~hp~f~~~ 418 (447)
.....++...+.++.+||.+||+.||++|| +++++++||||...
T Consensus 210 ---------------------~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 210 ---------------------HDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred ---------------------cCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 111123333467889999999999999999 99999999999764
No 79
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.4e-40 Score=326.91 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=200.6
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..+++.||+|+++... .....+..|..+++.+. +|+||++++++|... ..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~Iv~~~~~~~~~----~~~ 71 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-----NHPFLVGLHSCFQTE----SRL 71 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCCCceEEEEEcC----CEE
Confidence 36899999999999999999999999987643 23345778888888874 799999999988753 689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~lv~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili------------------- 129 (329)
T cd05588 72 FFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLL------------------- 129 (329)
T ss_pred EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEE-------------------
Confidence 9999999 88898777543 4589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc---ccccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~---~~~~~~~ 273 (447)
+....++|+|||++... .......
T Consensus 130 -----------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (329)
T cd05588 130 -----------------------------------------------------DAEGHIKLTDYGMCKEGIRPGDTTSTF 156 (329)
T ss_pred -----------------------------------------------------CCCCCEEECcCccccccccCCCccccc
Confidence 34567999999998642 1223345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+||+.|+|||++.+..++.++|+|||||++|+|++|+.||......... .......+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~-~~~~~~~~---------------------- 213 (329)
T cd05588 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP-DQNTEDYL---------------------- 213 (329)
T ss_pred cCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc-cccchHHH----------------------
Confidence 7899999999999988999999999999999999999999643211100 00000000
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC------hHHHhcCcccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT------AQQCLQHPWLSLR 418 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt------a~elL~hp~f~~~ 418 (447)
...+......++..++..+.++|.+||+.||.+|+| ++++++||||...
T Consensus 214 ----------------~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 214 ----------------FQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred ----------------HHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 111222233355566778999999999999999997 7899999999764
No 80
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3e-40 Score=327.11 Aligned_cols=246 Identities=27% Similarity=0.415 Sum_probs=199.0
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||+||+|++..++..||+|+++... .....+..|.++++.+. .|+||+++++++.. ...+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~h~~i~~~~~~~~~----~~~~ 71 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-----KHPFLTQLHSCFQT----KDRL 71 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEc----CCEE
Confidence 46899999999999999999999999987653 23445677888888774 79999999999875 3689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill------------------- 129 (318)
T cd05570 72 FFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLL------------------- 129 (318)
T ss_pred EEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEE-------------------
Confidence 9999999 88888877643 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+..+.++|+|||++.... ......
T Consensus 130 -----------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (318)
T cd05570 130 -----------------------------------------------------DSEGHIKIADFGMCKEGILGGVTTSTF 156 (318)
T ss_pred -----------------------------------------------------CCCCcEEecccCCCeecCcCCCcccce
Confidence 345679999999986421 222334
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+|+..|+|||++.+..++.++|+|||||++|+|++|..||...+ .......
T Consensus 157 ~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~------~~~~~~~----------------------- 207 (318)
T cd05570 157 CGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD------EDELFQS----------------------- 207 (318)
T ss_pred ecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC------HHHHHHH-----------------------
Confidence 68999999999999899999999999999999999999996542 1111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-----HHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta-----~elL~hp~f~~~~ 419 (447)
+......++...+..+.+||.+||+.||.+|||+ .++++||||+...
T Consensus 208 -------------------i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~ 259 (318)
T cd05570 208 -------------------ILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID 259 (318)
T ss_pred -------------------HHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 1111122344456789999999999999999999 9999999998753
No 81
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.5e-40 Score=331.20 Aligned_cols=253 Identities=22% Similarity=0.375 Sum_probs=202.8
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
.++|++.++||+|+||.||+|++..++..||+|++.... .....+.+|+++++.+ +|++|+++++++..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~------~h~~iv~~~~~~~~- 114 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA------NSEWIVQLHYAFQD- 114 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC------CCCCcceEEEEEec-
Confidence 468999999999999999999999999999999986532 2234567899999988 88999999988874
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+..+|+||||+ +++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+|||+
T Consensus 115 ---~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl------------ 175 (370)
T cd05596 115 ---DKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLL------------ 175 (370)
T ss_pred ---CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEE------------
Confidence 46899999999 88998887542 488899999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+..+.++|+|||++......
T Consensus 176 ------------------------------------------------------------~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 176 ------------------------------------------------------------DKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred ------------------------------------------------------------cCCCCEEEEeccceeeccCC
Confidence 44677999999998754322
Q ss_pred ----cccCCCCCCccChHHhhcC----CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 270 ----FAEEIQTRQYRAPEVILRA----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~~----~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
....+||+.|+|||++.+. .++.++|+|||||++|+|++|..||...+ .......+.. ...
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~---~~~-- 264 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMD---HKN-- 264 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC------HHHHHHHHHc---CCC--
Confidence 2235789999999999753 37899999999999999999999997653 1111111111 000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh--hhHHHHHHHHhhccccCCCC--CCChHHHhcCccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE--TDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSL 417 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ll~~~L~~dP~k--Rpta~elL~hp~f~~ 417 (447)
...++. ..+.++.+||.+||+.+|.+ |+|++++++||||+.
T Consensus 265 -----------------------------------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 265 -----------------------------------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred -----------------------------------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 001111 34678999999999999988 999999999999986
Q ss_pred cc
Q 013220 418 RN 419 (447)
Q Consensus 418 ~~ 419 (447)
..
T Consensus 310 ~~ 311 (370)
T cd05596 310 DQ 311 (370)
T ss_pred CC
Confidence 43
No 82
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.2e-40 Score=330.79 Aligned_cols=244 Identities=29% Similarity=0.447 Sum_probs=197.3
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..++..||+|+++... .....+..|+++++.+ .|+||++++..+.. ...+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~------~hp~i~~~~~~~~~----~~~~ 70 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS------RHPFLTALKYSFQT----HDRL 70 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCCceEEEEEc----CCEE
Confidence 46899999999999999999999999987543 2234567788888887 78999999988875 3689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-hCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR-ELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
|+||||+ +++|...+... ..+++..+..++.||+.||+|||+ + ||+||||||+||++
T Consensus 71 ~lv~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll------------------ 129 (325)
T cd05594 71 CFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLML------------------ 129 (325)
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEE------------------
Confidence 9999999 78888777543 358999999999999999999997 5 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---ccccc
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAE 272 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~ 272 (447)
+..+.++|+|||++.... .....
T Consensus 130 ------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (325)
T cd05594 130 ------------------------------------------------------DKDGHIKITDFGLCKEGIKDGATMKT 155 (325)
T ss_pred ------------------------------------------------------CCCCCEEEecCCCCeecCCCCccccc
Confidence 445679999999986422 22233
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
..||+.|+|||++.+..++.++|||||||++|+|++|..||...+ .......
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~------~~~~~~~---------------------- 207 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFEL---------------------- 207 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC------HHHHHHH----------------------
Confidence 578999999999998889999999999999999999999996542 1111111
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCcccccc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLR 418 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~ 418 (447)
+......++...+.++.+||.+||+.||++|+ ++.++++||||...
T Consensus 208 --------------------i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 208 --------------------ILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred --------------------HhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 11111223445577899999999999999997 99999999999864
No 83
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.4e-40 Score=334.09 Aligned_cols=253 Identities=24% Similarity=0.387 Sum_probs=199.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+.|++.++||+|+||+||+|++..+++.||+|++.... .....+.+|+++++.+ .|++|+++++.|..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l------~h~~iv~~~~~~~~-- 72 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA------DNEWVVKLYYSFQD-- 72 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC------CCCCcceEEEEEEc--
Confidence 46999999999999999999999999999999886543 2245677899999998 78999999999875
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+..+|+||||| +++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||++
T Consensus 73 --~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill------------- 134 (376)
T cd05598 73 --KDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILI------------- 134 (376)
T ss_pred --CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEE-------------
Confidence 36899999999 88999988653 3588999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-- 268 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~-- 268 (447)
+....++|+|||++.....
T Consensus 135 -----------------------------------------------------------~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 135 -----------------------------------------------------------DRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred -----------------------------------------------------------CCCCCEEEEeCCCCccccccc
Confidence 3456799999998742100
Q ss_pred --------------------------------------------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHH
Q 013220 269 --------------------------------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAF 304 (447)
Q Consensus 269 --------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ 304 (447)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 011246899999999999989999999999999999
Q ss_pred HHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhh
Q 013220 305 ELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETD 384 (447)
Q Consensus 305 ~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (447)
+|++|..||...+. ..... .+..... . ........+
T Consensus 236 ell~G~~Pf~~~~~------~~~~~---~i~~~~~-~----------------------------------~~~~~~~~~ 271 (376)
T cd05598 236 EMLVGQPPFLADTP------AETQL---KVINWET-T----------------------------------LHIPSQAKL 271 (376)
T ss_pred ehhhCCCCCCCCCH------HHHHH---HHhccCc-c----------------------------------ccCCCCCCC
Confidence 99999999976531 11111 1100000 0 000011234
Q ss_pred HHHHHHHHhhccccCCCCCC---ChHHHhcCcccccc
Q 013220 385 AREFAEFLVPLLDFTPEKRP---TAQQCLQHPWLSLR 418 (447)
Q Consensus 385 ~~~l~~ll~~~L~~dP~kRp---ta~elL~hp~f~~~ 418 (447)
+.++.+||.+|+ .+|.+|+ |+.++++||||+..
T Consensus 272 s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 272 SREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 667889999976 5999999 99999999999864
No 84
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-39 Score=316.61 Aligned_cols=256 Identities=28% Similarity=0.380 Sum_probs=204.9
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.|++.+.||+|+||+||++.+..++..||+|++.... .....+.+|+++++.+ +|++|+++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~--- 71 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV------NSRFVVSLAYAYET--- 71 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc------CCCCEeeeeeeecC---
Confidence 3889999999999999999999999999999886542 2234567899999999 78999999998874
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
++.+++||||+ +++|.+.+.......+++..+..++.|++.||.|||++ ||+||||||+||++
T Consensus 72 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~-------------- 135 (285)
T cd05605 72 -KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILL-------------- 135 (285)
T ss_pred -CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEE--------------
Confidence 36899999999 78888776544334689999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....++|+|||++......
T Consensus 136 ----------------------------------------------------------~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 136 ----------------------------------------------------------DDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ----------------------------------------------------------CCCCCEEEeeCCCceecCCCCc
Confidence 33567999999998654322
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+|+..|+|||.+.+..++.++|+||+||++|+|++|..||.+... ......+...+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~------~~~~~~~~~~~-------------- 217 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE------KVKREEVERRV-------------- 217 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch------hhHHHHHHHHh--------------
Confidence 2335789999999999888899999999999999999999999975431 11111111111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
......++...+..+.+||.+||+.||++|| +++++++||||....
T Consensus 218 ------------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 218 ------------------------KEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred ------------------------hhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 0111123344567889999999999999999 999999999998643
No 85
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.6e-40 Score=326.34 Aligned_cols=246 Identities=29% Similarity=0.435 Sum_probs=195.6
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..+++.||+|+++... ...+....|.+++..+. +|++|+++++++.. +..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~hp~i~~~~~~~~~----~~~~ 71 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAW-----EHPFLTHLFCTFQT----KEHL 71 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhcc-----CCCCccceeeEEEc----CCEE
Confidence 46899999999999999999999999987653 22334555666665543 79999999998874 4689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
++||||+ +++|...+... ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 72 ~lv~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill------------------- 129 (316)
T cd05592 72 FFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLL------------------- 129 (316)
T ss_pred EEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEE-------------------
Confidence 9999999 88998877643 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+....++|+|||++.... ......
T Consensus 130 -----------------------------------------------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~ 156 (316)
T cd05592 130 -----------------------------------------------------DKDGHIKIADFGMCKENMNGEGKASTF 156 (316)
T ss_pred -----------------------------------------------------CCCCCEEEccCcCCeECCCCCCccccc
Confidence 345679999999986432 222345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+ .......+ .
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~------~~~~~~~i---~------------------ 209 (316)
T cd05592 157 CGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED------EDELFDSI---L------------------ 209 (316)
T ss_pred cCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC------HHHHHHHH---H------------------
Confidence 78999999999998889999999999999999999999997542 11111111 1
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-HHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-QQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta-~elL~hp~f~~~~ 419 (447)
...+.++...+.++.+||.+||+.||.+||++ ++++.||||....
T Consensus 210 ---------------------~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 210 ---------------------NDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred ---------------------cCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 11112334456788899999999999999986 5888999998753
No 86
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2e-39 Score=319.87 Aligned_cols=293 Identities=27% Similarity=0.376 Sum_probs=206.0
Q ss_pred EEeecccCceEEEEEEeCC--CCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEE
Q 013220 41 QRKLGWGQFSIVWLAYDTR--TSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLC 118 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~ 118 (447)
..+||+|+||+||+|++.. ++..||+|.+..... ...+.+|+++++.+ .|+||+++++++... .....+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l------~h~niv~~~~~~~~~--~~~~~~ 76 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLREL------KHPNVIALQKVFLSH--SDRKVW 76 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhC------CCCCeeeEEEEEecc--CCCeEE
Confidence 3579999999999998653 568999998765432 34577899999999 789999999988654 446899
Q ss_pred EEEecccccHHHHHHhhc-------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 119 MVLEFLGDSLLRLIKYSR-------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 119 lvmE~~~~~L~~~~~~~~-------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+||||+++++.+.+.... ...+++..+..++.|++.||+|||+. ||+||||||+||++....
T Consensus 77 lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~---------- 145 (317)
T cd07867 77 LLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEG---------- 145 (317)
T ss_pred EEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCC----------
Confidence 999999888887764321 12378888999999999999999996 999999999999994311
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....++|+|||++......
T Consensus 146 ----------------------------------------------------------~~~~~~kl~DfG~a~~~~~~~~ 167 (317)
T cd07867 146 ----------------------------------------------------------PERGRVKIADMGFARLFNSPLK 167 (317)
T ss_pred ----------------------------------------------------------CCCCcEEEeeccceeccCCCcc
Confidence 22457999999999754432
Q ss_pred ----cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCC---CCchHHHHHHHHHhCCCCHH
Q 013220 270 ----FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGF---CEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~g~~~~~ 341 (447)
.....+|+.|+|||++.+. .++.++|||||||++|+|++|..||........ ......+..+...+|.....
T Consensus 168 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (317)
T cd07867 168 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADK 247 (317)
T ss_pred cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChh
Confidence 1234678999999999874 478999999999999999999999976542211 12344566666776655543
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..........+.......... ..........+. .........+.+||.+||+.||.+|||++|+|+||||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 248 DWEDIRKMPEYPTLQKDFRRT-TYANSSLIKYME---KHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhhhcccchhhhhhhccc-ccCCchhhhhhh---cccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 322211111111111000000 000001111111 1111234568899999999999999999999999998
No 87
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-40 Score=342.69 Aligned_cols=248 Identities=26% Similarity=0.392 Sum_probs=206.2
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEE-echhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccc-cccc-C
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKI-QKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH-FKHA-G 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~-~~~~-~ 111 (447)
+.++++.+.|.+|||+.||+|++...+..||+|. +..++...+.+.+|+++|+.|. +|+|||.|++. .... +
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-----gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-----GHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-----CCCceeeEeccccccccC
Confidence 4668999999999999999999998888999994 5557778899999999999997 89999999994 3322 2
Q ss_pred CC-cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCC--cccccCCCCCeEeeecCCCCCCc
Q 013220 112 PN-GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELG--IIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 112 ~~-~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~g--IiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.+ ...+.|+|||| |+.|.+++.......|++.+++.|++++++|+++||. +. |||||||-+|+|++
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls--------- 180 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLS--------- 180 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEc---------
Confidence 23 36799999999 7899999987666669999999999999999999998 46 99999999999993
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
.++..||||||.++...
T Consensus 181 ---------------------------------------------------------------~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 181 ---------------------------------------------------------------ADGNYKLCDFGSATTKI 197 (738)
T ss_pred ---------------------------------------------------------------CCCCEEeCccccccccc
Confidence 46789999999996443
Q ss_pred cccc------------cCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHH
Q 013220 268 KQFA------------EEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMM 332 (447)
Q Consensus 268 ~~~~------------~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~ 332 (447)
...+ ....|+.|+|||+|. +.+.+.|+|||+|||+||-|+....||.....
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------------- 263 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------------- 263 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------------
Confidence 2221 114689999999986 56789999999999999999999999975521
Q ss_pred HHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh--hhHHHHHHHHhhccccCCCCCCChHHHh
Q 013220 333 ELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE--TDAREFAEFLVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ll~~~L~~dP~kRpta~elL 410 (447)
-+|+..++.+|. ..+..+.+||+.||+.||++||++-|++
T Consensus 264 --------------------------------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~ 305 (738)
T KOG1989|consen 264 --------------------------------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVL 305 (738)
T ss_pred --------------------------------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHH
Confidence 223444444554 6789999999999999999999999988
Q ss_pred cC
Q 013220 411 QH 412 (447)
Q Consensus 411 ~h 412 (447)
.+
T Consensus 306 ~~ 307 (738)
T KOG1989|consen 306 EE 307 (738)
T ss_pred HH
Confidence 44
No 88
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.8e-40 Score=325.43 Aligned_cols=254 Identities=25% Similarity=0.378 Sum_probs=199.8
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||+||+|++..+++.||+|+++... .....+..|+.++..+. +|+||+++++++... ...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~~~~~~~~~----~~~ 71 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTE----SRL 71 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-----CCCcCCceeeEEEeC----CEE
Confidence 46899999999999999999999999887542 23345677888877664 799999999998753 689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
++||||+ +++|...+... ..+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~lv~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili------------------- 129 (329)
T cd05618 72 FFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLL------------------- 129 (329)
T ss_pred EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEE-------------------
Confidence 9999999 88888776543 4589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+.++.++|+|||++.... ......
T Consensus 130 -----------------------------------------------------~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (329)
T cd05618 130 -----------------------------------------------------DSEGHIKLTDYGMCKEGLRPGDTTSTF 156 (329)
T ss_pred -----------------------------------------------------CCCCCEEEeeCCccccccCCCCccccc
Confidence 445679999999986432 222345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+||..|+|||++.+..++.++|+|||||++|+|++|..||......... .......+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~-~~~~~~~~---------------------- 213 (329)
T cd05618 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-DQNTEDYL---------------------- 213 (329)
T ss_pred cCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCc-ccccHHHH----------------------
Confidence 7899999999999988999999999999999999999999643211100 00000001
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh------HHHhcCcccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA------QQCLQHPWLSLR 418 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta------~elL~hp~f~~~ 418 (447)
...+......++...+..+.+||.+||+.||++|||+ +++++||||+..
T Consensus 214 ----------------~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 214 ----------------FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred ----------------HHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 1112222334556667789999999999999999984 799999999865
No 89
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-42 Score=333.51 Aligned_cols=253 Identities=31% Similarity=0.461 Sum_probs=210.4
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
.....|+.+++||.|+||.||+|.+..+++.||||++..+. ...+.+..|+.+|..+ .++||.++|+.|..
T Consensus 10 ~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~------~~~~it~yygsyl~- 82 (467)
T KOG0201|consen 10 DPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC------DSPNITEYYGSYLK- 82 (467)
T ss_pred CcccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc------CcchHHhhhhheee-
Confidence 33467999999999999999999999999999999988664 4456888999999999 77899999999985
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+..+|++|||| ||++.+++..+. .+.+..+..++++++.||.|+|.+ +.+|||||+.||++..
T Consensus 83 ---g~~LwiiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~---------- 146 (467)
T KOG0201|consen 83 ---GTKLWIIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSE---------- 146 (467)
T ss_pred ---cccHHHHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEec----------
Confidence 47899999999 889999887543 258888999999999999999997 9999999999999943
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
.+.+||+|||.+......
T Consensus 147 --------------------------------------------------------------~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 147 --------------------------------------------------------------SGDVKLADFGVAGQLTNT 164 (467)
T ss_pred --------------------------------------------------------------cCcEEEEecceeeeeech
Confidence 478999999999654422
Q ss_pred ---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCC
Q 013220 270 ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 346 (447)
Q Consensus 270 ---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (447)
...++||++|||||++.+..|+.|+||||||+++++|++|.+|+..... +..++-+-...|
T Consensus 165 ~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP---------mrvlflIpk~~P------- 228 (467)
T KOG0201|consen 165 VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP---------MRVLFLIPKSAP------- 228 (467)
T ss_pred hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc---------ceEEEeccCCCC-------
Confidence 3567999999999999988999999999999999999999999976531 111111111111
Q ss_pred CCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 347 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
+.+....+..+.+|+..||+.||+.||+|+++|+|+|++.
T Consensus 229 -------------------------------P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 229 -------------------------------PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred -------------------------------CccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 1122234678999999999999999999999999999996
No 90
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.8e-40 Score=327.69 Aligned_cols=254 Identities=23% Similarity=0.375 Sum_probs=202.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|.+.+.||+|+||+||+|++..+++.||+|+++.... ....+.+|+++++.+ +|++|++++..+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~~~~i~~~~~~~~~-- 72 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS------NSPWIPQLQYAFQD-- 72 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceeeEEec--
Confidence 369999999999999999999999999999999876533 345677888888887 78999999988874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
....++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 73 --~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll------------- 135 (330)
T cd05601 73 --KDNLYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLI------------- 135 (330)
T ss_pred --CCeEEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEE-------------
Confidence 36899999999 889998886542 4589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.++|+|||++.......
T Consensus 136 -----------------------------------------------------------~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 136 -----------------------------------------------------------DRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred -----------------------------------------------------------CCCCCEEeccCCCCeECCCCC
Confidence 446779999999996543221
Q ss_pred ----ccCCCCCCccChHHhh------cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 271 ----AEEIQTRQYRAPEVIL------RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 271 ----~~~~gt~~y~aPE~l~------~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
....||+.|+|||++. +..++.++|||||||++|+|++|..||...+ .......+.......
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~~~~~~-- 228 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT------SAKTYNNIMNFQRFL-- 228 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC------HHHHHHHHHcCCCcc--
Confidence 2236899999999987 3457899999999999999999999996542 111222111100000
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
..+.....+..+.+||.+||+ +|.+|||++++++||||+..
T Consensus 229 ------------------------------------~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 229 ------------------------------------KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ------------------------------------CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 000112346688999999998 99999999999999999864
No 91
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-39 Score=330.58 Aligned_cols=288 Identities=22% Similarity=0.354 Sum_probs=214.5
Q ss_pred CccccCCceEEEEeecccCceEEEEEEeC--CCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDT--RTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 30 g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
+.++. .+|.+.+.||.|+||.||+|... .++..||+|.+... ....+|+++++.+ +|+||+++++.|
T Consensus 87 ~~~~~-~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l------~h~~iv~~~~~~ 155 (392)
T PHA03207 87 ASVVR-MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTI------SHRAIINLIHAY 155 (392)
T ss_pred chhcc-CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhc------CCCCccceeeeE
Confidence 34443 68999999999999999999753 45688999977653 2356899999999 789999999988
Q ss_pred cccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 108 KHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.. ....|++||++++++...+.. ...+++..+..++.||+.||+|||++ ||+||||||+|||+
T Consensus 156 ~~----~~~~~lv~e~~~~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill---------- 218 (392)
T PHA03207 156 RW----KSTVCMVMPKYKCDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFL---------- 218 (392)
T ss_pred ee----CCEEEEEehhcCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEE----------
Confidence 74 368999999998888887743 24589999999999999999999996 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+....++|+|||++....
T Consensus 219 --------------------------------------------------------------~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 219 --------------------------------------------------------------DEPENAVLGDFGAACKLD 236 (392)
T ss_pred --------------------------------------------------------------cCCCCEEEccCccccccC
Confidence 345679999999986544
Q ss_pred cc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 268 KQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 268 ~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
.. ....+||..|+|||++.+..++.++|||||||++|+|++|+.||.+.... .....+..+.+.++..+..+
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~~~l~~i~~~~~~~~~~~ 313 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVK---SSSSQLRSIIRCMQVHPLEF 313 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCC---CcHHHHHHHHHHhccCcccc
Confidence 22 12347899999999999888999999999999999999999999876533 35566777777776665443
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
....... ......+........+ .....+. ....+.++.+||.+||+.||++|||+.|+|+||||+..
T Consensus 314 ~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 314 PQNGSTN--LCKHFKQYAIVLRPPY-TIPPVIR-----KYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred CCccchh--HHHHHHhhcccccCCc-cccchhh-----ccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 2111000 0000000000000000 0000000 01234578899999999999999999999999999854
No 92
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.4e-40 Score=325.81 Aligned_cols=246 Identities=30% Similarity=0.447 Sum_probs=196.3
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..+++.||+|+++... ........|.+++..+. +|++|+++++++.. ...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~hp~iv~~~~~~~~----~~~~ 71 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-----EHPFLTHLYCTFQT----KENL 71 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc-----CCCcCcceEEEEEe----CCEE
Confidence 46899999999999999999999999987653 22345566777776542 89999999999875 3689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
++||||+ +++|...+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~------------------- 129 (316)
T cd05619 72 FFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILL------------------- 129 (316)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEE-------------------
Confidence 9999999 88998888643 3488999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+....++|+|||++.... ......
T Consensus 130 -----------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (316)
T cd05619 130 -----------------------------------------------------DTDGHIKIADFGMCKENMLGDAKTCTF 156 (316)
T ss_pred -----------------------------------------------------CCCCCEEEccCCcceECCCCCCceeee
Confidence 335679999999986422 222345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
.||..|+|||++.+..++.++|+|||||++|+|++|..||...+ .......+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~~~i---------------------- 208 (316)
T cd05619 157 CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD------EEELFQSI---------------------- 208 (316)
T ss_pred cCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC------HHHHHHHH----------------------
Confidence 78999999999998889999999999999999999999997542 11111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChH-HHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ-QCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~-elL~hp~f~~~~ 419 (447)
....+.++...+..+.+||.+||+.||++||++. ++++||||+...
T Consensus 209 --------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 209 --------------------RMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred --------------------HhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 0011112333466888999999999999999996 999999998864
No 93
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-39 Score=323.77 Aligned_cols=291 Identities=21% Similarity=0.323 Sum_probs=209.4
Q ss_pred cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+.++|++.++||.|+||.||+|++..++..+|+|++... ......+.+|+++++.+ +|+||++++++|...
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~- 75 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC------NSPYIVGFYGAFYSD- 75 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC------CCCcccceeEEEEEC-
Confidence 357999999999999999999999999999999987643 23345788999999999 789999999998854
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
.+.++||||+ +++|.+++... ..+++..+..++.|++.||.|||++.+|+|+||||+||++
T Consensus 76 ---~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili------------- 137 (333)
T cd06650 76 ---GEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV------------- 137 (333)
T ss_pred ---CEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE-------------
Confidence 6899999999 88999888653 3488899999999999999999974379999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+....++|+|||++......
T Consensus 138 -----------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 138 -----------------------------------------------------------NSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred -----------------------------------------------------------cCCCCEEEeeCCcchhhhhhc
Confidence 33567999999998654332
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh-hCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA-IGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~ 348 (447)
.....|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...+. ..+ ...++....... .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~ 228 (333)
T cd06650 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA-------KEL---ELMFGCPVEGDPAESETS 228 (333)
T ss_pred cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcch-------hHH---HHHhcCcccCCccccccC
Confidence 2345789999999999988899999999999999999999999975431 111 111111110000 00000
Q ss_pred ccchhcccchhhhhhhcc------cCchhHHhhhhc-CCCh-hhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLK------FWSLDRLLVDKY-RFSE-TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~-~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.... ............. ....+.+..... ..+. ..+.++.+||.+||+.||++|||++|++.||||+...
T Consensus 229 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 229 PRPR-PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred cccC-CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 0000 0000000000000 000111111111 1111 2456899999999999999999999999999998754
No 94
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.6e-39 Score=308.88 Aligned_cols=252 Identities=31% Similarity=0.582 Sum_probs=201.4
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHH---HHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQ---AALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
|++.++||+|+||+||+|.+..+++.||+|++........ ....|+.+++.+ .|++|+++++.+.. .
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~----~ 70 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL------RHPNIVQILDVFQD----D 70 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH------TBTTBCHEEEEEEE----S
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc------cccccccccccccc----c
Confidence 8999999999999999999999999999998876643333 334599999999 78999999999986 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++|||++ +++|..++... ..+++..+..++.|++.||++||++ ||+|+||||+||++
T Consensus 71 ~~~~~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~---------------- 131 (260)
T PF00069_consen 71 NYLYIVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILL---------------- 131 (260)
T ss_dssp SEEEEEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEE----------------
T ss_pred cccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccc----------------
Confidence 6899999999 55999888733 4589999999999999999999997 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc---cccc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQF 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~---~~~~ 270 (447)
+....++|+|||.+... ....
T Consensus 132 --------------------------------------------------------~~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 132 --------------------------------------------------------DENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp --------------------------------------------------------STTSEEEESSGTTTEESTSTTSEB
T ss_pred --------------------------------------------------------cccccccccccccccccccccccc
Confidence 44677899999998642 2334
Q ss_pred ccCCCCCCccChHHhh-cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~-~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+. +..++.++|+||||+++++|++|..||... ........+.+......
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~------~~~~~~~~~~~~~~~~~---------- 219 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES------NSDDQLEIIEKILKRPL---------- 219 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS------SHHHHHHHHHHHHHTHH----------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc------cchhhhhhhhhcccccc----------
Confidence 4557899999999998 677899999999999999999999999754 11222222222211100
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.............+.++|.+||+.||++|||++++++||||
T Consensus 220 -------------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 220 -------------------------PSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -------------------------HHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -------------------------cccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 00000111124789999999999999999999999999998
No 95
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.2e-39 Score=329.65 Aligned_cols=252 Identities=23% Similarity=0.388 Sum_probs=200.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+++++.+ +|+||+++++++..
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~~- 114 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFCAFQD- 114 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC------CCCCEeeEEEEEEc-
Confidence 378999999999999999999999999999999886532 2234577899999888 89999999999874
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
...+|+||||| +++|.+++... .+++..++.++.||+.||+|||++ ||+||||||+|||+
T Consensus 115 ---~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl------------ 175 (370)
T cd05621 115 ---DKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLL------------ 175 (370)
T ss_pred ---CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEE------------
Confidence 47899999999 88999888543 488999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+..+.+||+|||++......
T Consensus 176 ------------------------------------------------------------~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 176 ------------------------------------------------------------DKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred ------------------------------------------------------------CCCCCEEEEecccceecccC
Confidence 44577999999999765322
Q ss_pred ----cccCCCCCCccChHHhhcCC----CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 270 ----FAEEIQTRQYRAPEVILRAG----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~~~----~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
....+||+.|+|||++.+.. ++.++|+|||||++|+|++|..||...+ .......+.....
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~------~~~~~~~i~~~~~----- 264 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS------LVGTYSKIMDHKN----- 264 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCc-----
Confidence 12457899999999997643 6789999999999999999999997553 1111111111000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC--hhhHHHHHHHHhhccccCCCC--CCChHHHhcCccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS--ETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSL 417 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ll~~~L~~dP~k--Rpta~elL~hp~f~~ 417 (447)
...++ ..++..+.++|.+||+.++.+ |+|++|+++||||+.
T Consensus 265 -----------------------------------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 265 -----------------------------------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred -----------------------------------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 00111 134678889999999855543 889999999999986
Q ss_pred c
Q 013220 418 R 418 (447)
Q Consensus 418 ~ 418 (447)
.
T Consensus 310 ~ 310 (370)
T cd05621 310 D 310 (370)
T ss_pred C
Confidence 4
No 96
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.9e-39 Score=318.23 Aligned_cols=281 Identities=27% Similarity=0.473 Sum_probs=213.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|.+.++||.|+||.||+|++..++..||+|.++... .....+.+|+++++.+ +|+||+++++++...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~nI~~~~~~~~~~--- 76 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL------KHANIVTLHDIIHTE--- 76 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc------CCCCcceEEEEEecC---
Confidence 67999999999999999999999999999999876432 2234677899999999 789999999998753
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||++++|.+.+.... ..+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 77 -~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~---------------- 137 (301)
T cd07873 77 -KSLTLVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLI---------------- 137 (301)
T ss_pred -CeEEEEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEE----------------
Confidence 6899999999878888775432 4588999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||++...... .
T Consensus 138 --------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~ 161 (301)
T cd07873 138 --------------------------------------------------------NERGELKLADFGLARAKSIPTKTY 161 (301)
T ss_pred --------------------------------------------------------CCCCcEEECcCcchhccCCCCCcc
Confidence 33567999999998654322 2
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+++.|+|||.+.+. .++.++|||||||++|+|++|+.||...+ ....+..+.+.++......+......
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 162 SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCChhhchhhhcc
Confidence 234568899999998764 47889999999999999999999997653 44566667777766655443221111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
..+. ... . .....+... .....++..+.+||.+||+.||.+|||++|+|+||||+.-
T Consensus 236 ~~~~-~~~-~------~~~~~~~~~----~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 236 EEFK-SYN-Y------PKYRADCLH----NHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred cccc-ccc-c------CccccccHH----hhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 1110 000 0 000000000 0112345678999999999999999999999999999754
No 97
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.9e-39 Score=313.99 Aligned_cols=249 Identities=26% Similarity=0.352 Sum_probs=196.9
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||+|+||+||+|.+..+++.||+|.+..... ..+.+..|+++++.+ +|++|+++..++.. ....++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l------~~~~i~~~~~~~~~----~~~~~l 70 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV------HSRFIVSLAYAFQT----KTDLCL 70 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC------CCCcEeeeeEEEcC----CCeEEE
Confidence 6999999999999999999999998765432 234567899999999 78999999988874 368999
Q ss_pred EEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 120 VLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
||||+ +++|...+... ....+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili------------------- 130 (280)
T cd05608 71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLL------------------- 130 (280)
T ss_pred EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEE-------------------
Confidence 99999 88887766332 224588999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~ 273 (447)
+....++|+|||.+...... ....
T Consensus 131 -----------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 131 -----------------------------------------------------DNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred -----------------------------------------------------CCCCCEEEeeCccceecCCCCcccccc
Confidence 33567999999998654322 2234
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
.|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.. .....+..
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~------~~~~~~~~-------------------- 211 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK------VENKELKQ-------------------- 211 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc------hhHHHHHH--------------------
Confidence 6899999999999989999999999999999999999999754311 00111110
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
.+......++...+..+.+|+.+||+.||++|| |++++++||||+...
T Consensus 212 ------------------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 212 ------------------RILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred ------------------hhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 001111123445577899999999999999999 889999999998744
No 98
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.5e-40 Score=325.41 Aligned_cols=244 Identities=27% Similarity=0.404 Sum_probs=196.8
Q ss_pred EeecccCceEEEEEEeC---CCCeEEEEEEechhH-----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 42 RKLGWGQFSIVWLAYDT---RTSSYVALKIQKSAA-----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+.||+|+||.||+|++. .+++.||+|+++... .....+.+|+++++.+ +|+||+++++.|...
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~iv~~~~~~~~~--- 72 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV------KHPFIVDLIYAFQTG--- 72 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC------CCCchhceeeEEecC---
Confidence 67999999999999764 468899999887543 2234567899999999 789999999988753
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...|+||||+ +++|...+... ..+.+..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~--------------- 133 (323)
T cd05584 73 -GKLYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILL--------------- 133 (323)
T ss_pred -CeEEEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEE---------------
Confidence 6899999999 88898887643 3478889999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQ 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~ 269 (447)
+..+.++|+|||++.... ..
T Consensus 134 ---------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 134 ---------------------------------------------------------DAQGHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred ---------------------------------------------------------CCCCCEEEeeCcCCeecccCCCc
Confidence 345679999999986432 12
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||...+ ....+..
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~------~~~~~~~------------------- 211 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN------RKKTIDK------------------- 211 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC------HHHHHHH-------------------
Confidence 233468999999999998888999999999999999999999997542 1111111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCcccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLR 418 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~ 418 (447)
+......++...+..+.+||.+||+.||++|| +++++++||||+..
T Consensus 212 -----------------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 212 -----------------------ILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred -----------------------HHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 11112223445567899999999999999999 89999999999764
No 99
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=324.25 Aligned_cols=245 Identities=26% Similarity=0.389 Sum_probs=200.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeE-EEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSY-VALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~-vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
....+.+.||.|+||+||+|.+. +.. ||||++..... ..+.+.+|+.+|.++ .|||||++++++...
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l------~HpNIV~f~G~~~~~- 111 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRL------RHPNIVQFYGACTSP- 111 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhC------CCCCeeeEEEEEcCC-
Confidence 45677777999999999999775 444 99998876542 256899999999999 899999999999864
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCC-cccccCCCCCeEeeecCCCCCCccc
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELG-IIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~g-IiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
. ..+++||||+ +|+|..++.......++...+..++.+|+.|+.|||++ + ||||||||+|+|+
T Consensus 112 -~-~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv------------ 176 (362)
T KOG0192|consen 112 -P-GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILV------------ 176 (362)
T ss_pred -C-CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEE------------
Confidence 1 1699999999 99999998764446799999999999999999999996 9 9999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc-ceeEeecCcccccc-
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRAN- 267 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kL~Dfg~a~~~~- 267 (447)
+... ++||+|||++....
T Consensus 177 ------------------------------------------------------------~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 177 ------------------------------------------------------------DLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred ------------------------------------------------------------cCCCCEEEECCCccceeecc
Confidence 3354 89999999997554
Q ss_pred --cccccCCCCCCccChHHhh--cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 268 --KQFAEEIQTRQYRAPEVIL--RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 268 --~~~~~~~gt~~y~aPE~l~--~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
...+...||+.|||||++. ..+|+.|+||||||+++|+|++|..||.... . .++...+..-+
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~------~-~~~~~~v~~~~------- 262 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA------P-VQVASAVVVGG------- 262 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC------H-HHHHHHHHhcC-------
Confidence 3334468999999999999 5689999999999999999999999998653 1 12222111111
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHh
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL 410 (447)
.++.++...+..+..|+.+||+.||.+||+..+++
T Consensus 263 --------------------------------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 263 --------------------------------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIV 297 (362)
T ss_pred --------------------------------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence 22335566788999999999999999999999886
No 100
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.8e-39 Score=313.65 Aligned_cols=277 Identities=28% Similarity=0.432 Sum_probs=208.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.++||.|+||.||+|++..++..||+|.++... .....+.+|+++++.+ +|+||+++++++.+.
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l------~h~~i~~~~~~~~~~--- 71 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL------KHKNIVRLYDVLHSD--- 71 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc------CCCCeeeHHHHhccC---
Confidence 5999999999999999999999999999999876432 2234577899999999 789999999998753
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...+++|||+++++.+.+.... ..+++..++.++.||+.||+|||+. ||+|+||||+||++
T Consensus 72 -~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~---------------- 132 (284)
T cd07839 72 -KKLTLVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLI---------------- 132 (284)
T ss_pred -CceEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEE----------------
Confidence 6899999999878887775432 4589999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||.+...... .
T Consensus 133 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 156 (284)
T cd07839 133 --------------------------------------------------------NKNGELKLADFGLARAFGIPVRCY 156 (284)
T ss_pred --------------------------------------------------------cCCCcEEECccchhhccCCCCCCc
Confidence 33567999999998754422 2
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+. .++.++|||||||++|+|++|..||.... +....+..+.+.++..+..........
T Consensus 157 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCC-----CHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 234678899999998775 46899999999999999999999875432 344555666666665554321110000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+ . .. ........ -.......+.++.+||.+||+.||.+|||++++++||||
T Consensus 232 ~~~-~------~~-----~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 232 PDY-K------PY-----PMYPATTS-LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred ccc-c------cc-----CCCCCcch-hhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 000 0 00 00000000 000122356788999999999999999999999999998
No 101
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-39 Score=334.71 Aligned_cols=297 Identities=22% Similarity=0.275 Sum_probs=210.9
Q ss_pred CccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeee
Q 013220 23 GYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIR 102 (447)
Q Consensus 23 ~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~ 102 (447)
.-.+..++.++.+..|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|+++++.+ +|+||++
T Consensus 156 ~~~~~~~~~~~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L------~HpnIv~ 224 (461)
T PHA03211 156 CKPPSEVAKVVAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRL------SHPAVLA 224 (461)
T ss_pred CCCccchhcccccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHC------CCCCCCc
Confidence 3455566666667889999999999999999999999999999995332 3456899999999 8899999
Q ss_pred ecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCC
Q 013220 103 LIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTID 182 (447)
Q Consensus 103 ~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~ 182 (447)
+++++... ...++|||++.++|...+.... ..+++..++.++.|++.||+|||++ ||+||||||+|||+
T Consensus 225 l~~~~~~~----~~~~lv~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl----- 293 (461)
T PHA03211 225 LLDVRVVG----GLTCLVLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLV----- 293 (461)
T ss_pred EEEEEEEC----CEEEEEEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEE-----
Confidence 99987753 6789999999888888775432 3589999999999999999999996 99999999999999
Q ss_pred CCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCc
Q 013220 183 PSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGN 262 (447)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~ 262 (447)
+....++|+|||+
T Consensus 294 -------------------------------------------------------------------~~~~~vkL~DFGl 306 (461)
T PHA03211 294 -------------------------------------------------------------------NGPEDICLGDFGA 306 (461)
T ss_pred -------------------------------------------------------------------CCCCCEEEcccCC
Confidence 3356799999999
Q ss_pred ccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCC-CCCchHHHHHHHHHhC
Q 013220 263 ACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQG-FCEDEDHLALMMELIG 336 (447)
Q Consensus 263 a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~g 336 (447)
+...... .....||..|+|||++.+..++.++|||||||++|+|++|..|+....... ......++..+++..+
T Consensus 307 a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~ 386 (461)
T PHA03211 307 ACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQ 386 (461)
T ss_pred ceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhc
Confidence 8654322 123468999999999999889999999999999999999887665433211 1122333333333322
Q ss_pred CCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC--hhhHHHHHHHHhhccccCCCCCCChHHHhcCcc
Q 013220 337 KMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS--ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 414 (447)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~ 414 (447)
.....+..... .... ..++......... ......+. ......+.+||.+||+.||.+|||++|+|+|||
T Consensus 387 ~~~~~~~~~~~--~~l~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 387 VHVDEFPQHAG--SRLV------SQYRHRAARNRRP-AYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred cccccCCCCcc--hHHH------HHHHhhhhcccCC-ccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 21111100000 0000 0000000000000 00000000 123457889999999999999999999999999
Q ss_pred ccc
Q 013220 415 LSL 417 (447)
Q Consensus 415 f~~ 417 (447)
|+.
T Consensus 458 f~~ 460 (461)
T PHA03211 458 FQS 460 (461)
T ss_pred cCC
Confidence 975
No 102
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.8e-39 Score=321.49 Aligned_cols=253 Identities=23% Similarity=0.361 Sum_probs=201.3
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..+++.||+|+++... ...+.+..|..++..+. +|++|+++++++... ..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~----~~~ 71 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-----SNPFLVGLHSCFQTT----SRL 71 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-----CCCCEeeEEEEEEeC----CEE
Confidence 46999999999999999999999999987643 23456778888888874 689999999988753 689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|...+... ..+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 72 ~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili------------------- 129 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLL------------------- 129 (327)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEE-------------------
Confidence 9999999 88998777543 3589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEE 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~ 273 (447)
+....++|+|||++.... ......
T Consensus 130 -----------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (327)
T cd05617 130 -----------------------------------------------------DADGHIKLTDYGMCKEGLGPGDTTSTF 156 (327)
T ss_pred -----------------------------------------------------eCCCCEEEeccccceeccCCCCceecc
Confidence 335679999999986422 223345
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+||+.|+|||++.+..++.++|||||||++|+|++|..||............ ..+.+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~---~~~~~-------------------- 213 (327)
T cd05617 157 CGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTE---DYLFQ-------------------- 213 (327)
T ss_pred cCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccH---HHHHH--------------------
Confidence 7899999999999989999999999999999999999999654321111111 11111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh------HHHhcCccccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA------QQCLQHPWLSLRN 419 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta------~elL~hp~f~~~~ 419 (447)
.+......++...+..+.++|.+||+.||++|+++ +++++||||...+
T Consensus 214 ------------------~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 214 ------------------VILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred ------------------HHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 11112223455567788999999999999999985 6999999998764
No 103
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.6e-39 Score=312.13 Aligned_cols=277 Identities=27% Similarity=0.444 Sum_probs=208.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.|++.+.||+|++|.||+|++..++..||+|.++... .....+.+|+.+++.+ +|+||+++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~---- 70 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL------QHPNIVCLQDVLMQ---- 70 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc------CCCCEeeeEEEEee----
Confidence 4899999999999999999999999999999876432 2235678899999999 78999999999875
Q ss_pred cceEEEEEecccccHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSR-YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...++||||+.+++...+.... ...+++..++.++.|++.||+|||+. ||+|+||||+||++
T Consensus 71 ~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~--------------- 134 (285)
T cd07861 71 ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLI--------------- 134 (285)
T ss_pred CCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEE---------------
Confidence 36899999999778877775432 24588999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+..+.++|+|||++.....+
T Consensus 135 ---------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~ 157 (285)
T cd07861 135 ---------------------------------------------------------DNKGVIKLADFGLARAFGIPVRV 157 (285)
T ss_pred ---------------------------------------------------------cCCCcEEECcccceeecCCCccc
Confidence 34567999999998654322
Q ss_pred cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....+++.|+|||.+.+. .++.++|+|||||++|+|++|+.||...+ ....+..+.+..+...+........
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDS------EIDQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhcchh
Confidence 2234568899999998764 47899999999999999999999997652 3344445555555544433221111
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...+..... . .... .... ....++.++.+||.+||+.||++|||+.++++||||
T Consensus 232 ~~~~~~~~~------~---~~~~-~~~~---~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 232 LPDYKNTFP------K---WKKG-SLRS---AVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hHHHHhhcc------c---cCcc-hhHH---hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 111100000 0 0000 0000 112356788899999999999999999999999998
No 104
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.1e-39 Score=321.86 Aligned_cols=251 Identities=25% Similarity=0.358 Sum_probs=201.6
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.|.+.+.||+|+||+||+|++..+++.||+|++.... ...+.+..|.++++.+. +|++|++++.++...
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~-- 73 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-----KPPFLTQLHSCFQTV-- 73 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCchhheeeEEecC--
Confidence 4788999999999999999999999999999887543 22345677888887774 567888888887753
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+.+|+||||+ +++|.+.+... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 74 --~~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill-------------- 134 (323)
T cd05615 74 --DRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVML-------------- 134 (323)
T ss_pred --CEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEE--------------
Confidence 6899999999 88998887643 3489999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--- 268 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--- 268 (447)
+....++|+|||++.....
T Consensus 135 ----------------------------------------------------------~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 135 ----------------------------------------------------------DSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred ----------------------------------------------------------CCCCCEEEeccccccccCCCCc
Confidence 3456799999999864321
Q ss_pred ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
......||+.|+|||++.+..++.++|+|||||++|+|++|..||...+ .......+.
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~---------------- 214 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED------EDELFQSIM---------------- 214 (323)
T ss_pred cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHH----------------
Confidence 1223468999999999998889999999999999999999999997542 111111111
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~~ 419 (447)
.....++...+..+.+++.+||+.||.+|++ .+++++||||+...
T Consensus 215 --------------------------~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~ 264 (323)
T cd05615 215 --------------------------EHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID 264 (323)
T ss_pred --------------------------hCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence 1122234445678899999999999999997 47899999999754
No 105
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.1e-39 Score=313.88 Aligned_cols=260 Identities=28% Similarity=0.381 Sum_probs=204.7
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.|++.+.||+|+||+||+|.+..+++.||+|.+.... .....+.+|+.+++.+ +|++|+++++.+..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l------~~~~i~~~~~~~~~--- 71 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV------NSRFVVSLAYAYET--- 71 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC------CCCCeeeeeEEEec---
Confidence 3788899999999999999999999999999876432 2234567899999998 78899999988874
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.+..++||||+ +++|.+.+.......+++..+..++.|++.||.|||+. ||+||||||+||++
T Consensus 72 -~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~-------------- 135 (285)
T cd05630 72 -KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILL-------------- 135 (285)
T ss_pred -CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEE--------------
Confidence 36899999999 88898887554445689999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--c
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--Q 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~ 269 (447)
+....++|+|||++..... .
T Consensus 136 ----------------------------------------------------------~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 136 ----------------------------------------------------------DDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ----------------------------------------------------------CCCCCEEEeeccceeecCCCcc
Confidence 3356699999999865432 2
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.....|+..|+|||++.+..++.++|+||+||++|+|++|..||...... .............+
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~------~~~~~~~~~~~~~~---------- 221 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK------IKREEVERLVKEVQ---------- 221 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc------chHHHHHhhhhhhh----------
Confidence 23357899999999999888999999999999999999999999754210 00011111000000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccccCCcc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~~~~~~ 423 (447)
..++...+..+.+||.+||+.||++||| ++|+++||||+..+....
T Consensus 222 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~ 272 (285)
T cd05630 222 ----------------------------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRL 272 (285)
T ss_pred ----------------------------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHH
Confidence 0122334567899999999999999999 999999999997654433
No 106
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2e-39 Score=326.67 Aligned_cols=251 Identities=23% Similarity=0.405 Sum_probs=199.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+.|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|++++..+ +|++|+++++.+..
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~iv~~~~~~~~-- 72 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA------DGAWVVKMFYSFQD-- 72 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCEeeEEEEEEc--
Confidence 36999999999999999999999999999999887543 2345677899999888 78999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+|+||||+ +++|.+.+... ..+++..++.++.|++.||+|||+. ||+||||||+||++
T Consensus 73 --~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli------------- 134 (360)
T cd05627 73 --KRNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLL------------- 134 (360)
T ss_pred --CCEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEE-------------
Confidence 46899999999 88999888643 3489999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+..+.++|+|||++......
T Consensus 135 -----------------------------------------------------------~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 135 -----------------------------------------------------------DAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred -----------------------------------------------------------CCCCCEEEeeccCCccccccc
Confidence 34567999999987533210
Q ss_pred -------------------------------------cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCC
Q 013220 270 -------------------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 312 (447)
Q Consensus 270 -------------------------------------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~P 312 (447)
....+||+.|+|||++.+..++.++|+|||||++|+|++|..|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 1134689999999999998999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh--hhHHHHHH
Q 013220 313 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE--TDAREFAE 390 (447)
Q Consensus 313 f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 390 (447)
|...+ .......+... . ....++. ..++++.+
T Consensus 236 f~~~~------~~~~~~~i~~~----~------------------------------------~~~~~p~~~~~s~~~~~ 269 (360)
T cd05627 236 FCSET------PQETYRKVMNW----K------------------------------------ETLVFPPEVPISEKAKD 269 (360)
T ss_pred CCCCC------HHHHHHHHHcC----C------------------------------------CceecCCCCCCCHHHHH
Confidence 97653 11111111100 0 0001111 24568889
Q ss_pred HHhhccccCCCCCC---ChHHHhcCcccccc
Q 013220 391 FLVPLLDFTPEKRP---TAQQCLQHPWLSLR 418 (447)
Q Consensus 391 ll~~~L~~dP~kRp---ta~elL~hp~f~~~ 418 (447)
||.+|+ .||.+|+ ++.++++||||+..
T Consensus 270 li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 270 LILRFC-TDSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred HHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence 999987 4999998 47999999999875
No 107
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.3e-39 Score=327.29 Aligned_cols=253 Identities=28% Similarity=0.418 Sum_probs=197.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+.|.+.++||+|+||+||+|++..+++.||||++... ......+.+|+++++.+ +|+||+++++++..
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~---- 143 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV------NHPNVVKCHDMFDH---- 143 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC------CCCCcceeeeEecc----
Confidence 5789999999999999999999999999999987543 23356788999999999 78999999998875
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...+++||||+ +++|... ...++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 144 ~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll--------------- 201 (353)
T PLN00034 144 NGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLI--------------- 201 (353)
T ss_pred CCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEE---------------
Confidence 36899999999 7777532 2256778889999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+....+||+|||++......
T Consensus 202 ---------------------------------------------------------~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 202 ---------------------------------------------------------NSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ---------------------------------------------------------cCCCCEEEcccccceeccccccc
Confidence 34567999999998754432
Q ss_pred cccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 270 FAEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
....+|+..|+|||++.. ...+.++|||||||++|+|++|+.||..... ......+.....
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~------~~~~~~~~~~~~-------- 290 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ------GDWASLMCAICM-------- 290 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC------ccHHHHHHHHhc--------
Confidence 234578999999999853 2345789999999999999999999973311 001111111000
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
......+...+.++.+||.+||+.||++|||++|+|+||||.....+
T Consensus 291 ------------------------------~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~ 337 (353)
T PLN00034 291 ------------------------------SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPG 337 (353)
T ss_pred ------------------------------cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCcc
Confidence 00111233456789999999999999999999999999999976433
No 108
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.8e-39 Score=311.51 Aligned_cols=257 Identities=27% Similarity=0.439 Sum_probs=203.4
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC-
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN- 113 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~- 113 (447)
.++|.+.+.||.|+||.||+|++..+++.||+|++.........+..|+++++.+. +|+||+++++.+......
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-----HHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-----CCCCeeeEeeEEeecCCCC
Confidence 47899999999999999999999999999999988765555567888999998874 689999999998764332
Q ss_pred -cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 114 -GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 114 -~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
....+++|||+ +++|.+++.......+++..+..++.|++.||+|||++ +|+|+|+||+||++.
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~------------- 145 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLT------------- 145 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEEC-------------
Confidence 25799999999 77899888764445688999999999999999999996 999999999999993
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
....++|+|||++......
T Consensus 146 -----------------------------------------------------------~~~~~~l~Dfg~~~~~~~~~~ 166 (272)
T cd06637 146 -----------------------------------------------------------ENAEVKLVDFGVSAQLDRTVG 166 (272)
T ss_pred -----------------------------------------------------------CCCCEEEccCCCceecccccc
Confidence 3556999999998754322
Q ss_pred -cccCCCCCCccChHHhh-----cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 -FAEEIQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.....|+..|+|||++. +..++.++|+|||||++|+|++|..||...+. ............
T Consensus 167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~---------~~~~~~~~~~~~---- 233 (272)
T cd06637 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---------MRALFLIPRNPA---- 233 (272)
T ss_pred cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH---------HHHHHHHhcCCC----
Confidence 22346889999999986 33578899999999999999999999964321 011110000000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
....+...+..+.+||.+||..||.+|||+.+++.||||
T Consensus 234 ---------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 ---------------------------------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ---------------------------------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 000112335688999999999999999999999999998
No 109
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-39 Score=323.47 Aligned_cols=245 Identities=26% Similarity=0.363 Sum_probs=193.2
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHH-HHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIE-VLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.||+|+||+||+|++..+++.||+|++..... ....+..|.. +++.+ +|+||+++++.+.. ...
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l------~hp~iv~~~~~~~~----~~~ 70 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV------KHPFLVGLHYSFQT----ADK 70 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC------CCCCCCCeeEEEEe----CCE
Confidence 368999999999999999999999998875432 2233444444 34555 89999999998874 368
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.|+||||+ +++|...+... ..+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 71 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll------------------ 129 (323)
T cd05575 71 LYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILL------------------ 129 (323)
T ss_pred EEEEEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEE------------------
Confidence 99999999 88898877643 3588999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---ccccc
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAE 272 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~ 272 (447)
+.++.++|+|||++.... .....
T Consensus 130 ------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 130 ------------------------------------------------------DSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred ------------------------------------------------------CCCCcEEEeccCCCcccccCCCcccc
Confidence 445679999999986432 22234
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
.+||+.|+|||++.+..++.++|||||||++|+|++|..||...+ .......
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~---------------------- 207 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------TAEMYDN---------------------- 207 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC------HHHHHHH----------------------
Confidence 578999999999998889999999999999999999999997542 1111111
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh----HHHhcCccccccc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLRN 419 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta----~elL~hp~f~~~~ 419 (447)
++......+...+..+.+||.+||+.||.+||++ .++++||||....
T Consensus 208 --------------------i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~ 258 (323)
T cd05575 208 --------------------ILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN 258 (323)
T ss_pred --------------------HHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 1111122334456789999999999999999998 6999999997643
No 110
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1e-38 Score=318.04 Aligned_cols=257 Identities=21% Similarity=0.309 Sum_probs=197.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|..+++.+ +|++|++++.++..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~-- 72 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG------DRRWITNLHYAFQD-- 72 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCCCceEEEEec--
Confidence 47999999999999999999999999999999987532 2234577888888887 78999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
..++|+||||+ +++|.+++... ...+++..++.++.||+.||+|||++ ||+||||||+|||+
T Consensus 73 --~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill------------- 135 (331)
T cd05597 73 --ENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLL------------- 135 (331)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEE-------------
Confidence 46899999999 88999888642 24589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.++|+|||++.......
T Consensus 136 -----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 136 -----------------------------------------------------------DKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred -----------------------------------------------------------CCCCCEEEEECCceeecCCCC
Confidence 345679999999986543221
Q ss_pred ----ccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 271 ----AEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 271 ----~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
...+||+.|+|||++.. ..++.++|||||||++|+|++|+.||...+ .......+.......+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~------~~~~~~~i~~~~~~~~-- 228 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKEHFQ-- 228 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC------HHHHHHHHHcCCCccc--
Confidence 12368999999999973 346889999999999999999999997542 1111111110000000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCC--CCChHHHhcCccccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~k--Rpta~elL~hp~f~~~~ 419 (447)
-.......++.+.+||.+||..++++ |++++++++||||....
T Consensus 229 -----------------------------------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~ 273 (331)
T cd05597 229 -----------------------------------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGID 273 (331)
T ss_pred -----------------------------------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCC
Confidence 00011224678899999988764444 78999999999998653
No 111
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.2e-40 Score=306.62 Aligned_cols=298 Identities=29% Similarity=0.404 Sum_probs=225.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCC----eEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTS----SYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~----~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
..|++.++||+|+||.||+|...+++ +.||||.++..++ .....-+|+.+++.+ .|+||+.+..+|.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl------~h~nvi~Lv~Vfl 97 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL------KHPNVISLVKVFL 97 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh------cCCcchhHHHHHh
Confidence 46999999999999999999554442 3789998776532 244667899999999 8899999999998
Q ss_pred ccCCCcceEEEEEecccccHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCC
Q 013220 109 HAGPNGQHLCMVLEFLGDSLLRLIKYSR---YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~~~~L~~~~~~~~---~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
.. ...+++++||...+|..++...+ .+.++...++.++.||+.|+.|||++ .|+|||+||.|||+..+.
T Consensus 98 ~~---d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdg---- 169 (438)
T KOG0666|consen 98 SH---DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDG---- 169 (438)
T ss_pred cc---CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccC----
Confidence 63 46899999999999999986543 23488889999999999999999998 999999999999995421
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
...+++|++|||++..
T Consensus 170 ----------------------------------------------------------------perG~VKIaDlGlaR~ 185 (438)
T KOG0666|consen 170 ----------------------------------------------------------------PERGRVKIADLGLARL 185 (438)
T ss_pred ----------------------------------------------------------------CccCeeEeecccHHHH
Confidence 1247899999999987
Q ss_pred cccccccC------CCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCC---CCchHHHHHHHHHh
Q 013220 266 ANKQFAEE------IQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGF---CEDEDHLALMMELI 335 (447)
Q Consensus 266 ~~~~~~~~------~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~ 335 (447)
...+.... +-|.+|+|||.+.|. .||.+.|+|+.|||+.+|++-...|.+...+-. .-..+++..+++++
T Consensus 186 ~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vL 265 (438)
T KOG0666|consen 186 FNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVL 265 (438)
T ss_pred hhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHc
Confidence 66554332 558999999999997 489999999999999999999999987642211 23678899999999
Q ss_pred CCCCHHhhhCCCCccchhcccchhhhhh--hcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 336 GKMPRKIAIGGAQSKDYFDRHGDLKRIR--RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
|.+....+....+.-++- ..+..++ .....++.+..... ..-++...+||.+||+.||.+|+|++|+|+|+
T Consensus 266 G~Pt~~~Wp~lkk~Pe~q---~~ls~f~~~~~~n~sL~~~~~~~----k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 266 GTPTDKDWPDLKKMPEYQ---TLLSDFRRHYYDNVSLHKYYHKH----KVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred CCCccccchhhhhCcchH---HHHHHhHHhhcCcchHHHHHHHh----cCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 998865432222222221 1111111 11111233322221 11133477999999999999999999999999
Q ss_pred ccccc
Q 013220 414 WLSLR 418 (447)
Q Consensus 414 ~f~~~ 418 (447)
||+..
T Consensus 339 yF~~d 343 (438)
T KOG0666|consen 339 YFTED 343 (438)
T ss_pred ccccC
Confidence 99975
No 112
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.7e-38 Score=309.40 Aligned_cols=259 Identities=27% Similarity=0.373 Sum_probs=205.1
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.|+..+.||+|+||+||+|.+..+++.||+|.+.... .....+.+|+++++.+ +|++|+.++..+..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l------~~~~i~~~~~~~~~--- 71 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV------NSQFVVNLAYAYET--- 71 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc------CCcCceeEEEEEec---
Confidence 3788899999999999999999999999999876542 2234567899999999 78899999888764
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
++..+++|||+ +++|...+.......+++..+..++.|++.||.|||+. ||+||||||+||++
T Consensus 72 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili-------------- 135 (285)
T cd05632 72 -KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILL-------------- 135 (285)
T ss_pred -CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEE--------------
Confidence 46899999999 77888777544434689999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--c
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--Q 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~ 269 (447)
+....++|+|||++..... .
T Consensus 136 ----------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 136 ----------------------------------------------------------DDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ----------------------------------------------------------CCCCCEEEecCCcceecCCCCc
Confidence 3356799999999865432 2
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.....|+..|+|||.+.+..++.++|+|||||++|+|++|..||.... .......+......
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~------~~~~~~~~~~~~~~------------ 219 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK------EKVKREEVDRRVLE------------ 219 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhhhc------------
Confidence 234578999999999988889999999999999999999999997542 11111111111100
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccccCCc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~~~~~ 422 (447)
....++...+..+.+|+.+||+.||++||| +.++++||||+....+.
T Consensus 220 --------------------------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~ 271 (285)
T cd05632 220 --------------------------TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKR 271 (285)
T ss_pred --------------------------cccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHH
Confidence 001123344667889999999999999999 89999999999875443
No 113
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.1e-38 Score=309.43 Aligned_cols=257 Identities=27% Similarity=0.440 Sum_probs=203.5
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC--
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP-- 112 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~-- 112 (447)
.+.|++.+.||.|+||.||+|++..+++.||+|+..........+..|+.+++.+. +|+||+++++.+.....
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-----HHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-----CCCcEEEEeeehhcccccC
Confidence 37899999999999999999999999999999988766555567888999998885 78999999999865322
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.+...+++|||+ +++|.+++.......+++..+..++.|++.||+|||+. ||+|+|++|+||++.
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~------------- 155 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLT------------- 155 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEC-------------
Confidence 346899999999 77898888765545588888999999999999999996 999999999999993
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
....++|+|||.+......
T Consensus 156 -----------------------------------------------------------~~~~~~l~dfg~~~~~~~~~~ 176 (282)
T cd06636 156 -----------------------------------------------------------ENAEVKLVDFGVSAQLDRTVG 176 (282)
T ss_pred -----------------------------------------------------------CCCCEEEeeCcchhhhhcccc
Confidence 3456999999998654322
Q ss_pred -cccCCCCCCccChHHhh-----cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 -FAEEIQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.....++..|+|||.+. +..++.++|+|||||++|+|++|..||..... ...+.......+..
T Consensus 177 ~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~---------~~~~~~~~~~~~~~-- 245 (282)
T cd06636 177 RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP---------MRALFLIPRNPPPK-- 245 (282)
T ss_pred CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH---------HhhhhhHhhCCCCC--
Confidence 23346889999999986 34578899999999999999999999964421 01111100000000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
......+..+.+||.+||+.||.+|||+.|+|+||||
T Consensus 246 -----------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 246 -----------------------------------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -----------------------------------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 0112345689999999999999999999999999997
No 114
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.5e-39 Score=323.29 Aligned_cols=254 Identities=24% Similarity=0.378 Sum_probs=199.1
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+++++.+ +|+||+++++.+..
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~~- 114 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFYAFQD- 114 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCCeEEEEEEc-
Confidence 378999999999999999999999999999999886432 2234567888999888 88999999998874
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+..+|+||||+ +++|.+++... .+++..++.++.||+.||+|||++ ||+||||||+||++
T Consensus 115 ---~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll------------ 175 (371)
T cd05622 115 ---DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLL------------ 175 (371)
T ss_pred ---CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEE------------
Confidence 47899999999 88998887542 488999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+..+.++|+|||++......
T Consensus 176 ------------------------------------------------------------~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 176 ------------------------------------------------------------DKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred ------------------------------------------------------------CCCCCEEEEeCCceeEcCcC
Confidence 34567999999999755422
Q ss_pred ----cccCCCCCCccChHHhhcCC----CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 270 ----FAEEIQTRQYRAPEVILRAG----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~~~----~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
....+||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+ .......++......
T Consensus 196 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~--- 266 (371)
T cd05622 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNSL--- 266 (371)
T ss_pred CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCcc---
Confidence 22457899999999997643 7899999999999999999999997653 111111111100000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCC--CCChHHHhcCcccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLR 418 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~k--Rpta~elL~hp~f~~~ 418 (447)
........+..+.+||.+||..++.+ |++++++++||||+..
T Consensus 267 -----------------------------------~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 267 -----------------------------------TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred -----------------------------------cCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 00011235678899999999844433 7899999999999864
No 115
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.4e-39 Score=322.20 Aligned_cols=244 Identities=30% Similarity=0.428 Sum_probs=196.8
Q ss_pred EeecccCceEEEEEEeC---CCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 42 RKLGWGQFSIVWLAYDT---RTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
+.||+|+||.||++++. .++..||+|+++.... ....+..|+++++.+ +|+||+++++.+.. ..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~----~~ 71 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV------NHPFIVKLHYAFQT----EG 71 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC------CCCCcccEEEEEEc----CC
Confidence 57999999999999763 5689999998876432 234567799999988 78999999998875 36
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..|+||||+ +++|.+.+... ..+++..+..++.||+.||+|||+. ||+||||||+||++
T Consensus 72 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~----------------- 131 (318)
T cd05582 72 KLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILL----------------- 131 (318)
T ss_pred EEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEE-----------------
Confidence 899999999 88998887543 3489999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
+....++|+|||++...... ..
T Consensus 132 -------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 132 -------------------------------------------------------DEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred -------------------------------------------------------CCCCcEEEeeccCCcccCCCCCcee
Confidence 33567999999998654322 23
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+ .......+
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~------~~~~~~~i-------------------- 210 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD------RKETMTMI-------------------- 210 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC------HHHHHHHH--------------------
Confidence 3578999999999998888999999999999999999999996542 11111111
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLR 418 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~ 418 (447)
......++...+..+.+||.+||+.||++||| +.+++.||||...
T Consensus 211 ----------------------~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 211 ----------------------LKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ----------------------HcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 11112234455678899999999999999999 6779999999864
No 116
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.1e-38 Score=307.53 Aligned_cols=249 Identities=27% Similarity=0.394 Sum_probs=195.0
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||+|+||+||++++..+++.||+|.+..... .......|+++++.+ +|+||+++++.+.. +.+.++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~i~~~~~~~~~----~~~~~l 70 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV------NSPFIVNLAYAFES----KTHLCL 70 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc------CCCcEEEEEEEEec----CCeEEE
Confidence 6999999999999999999999998764322 123455699999998 78999999998874 468999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|.+.+.......+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 71 v~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili--------------------- 128 (277)
T cd05607 71 VMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLL--------------------- 128 (277)
T ss_pred EEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEE---------------------
Confidence 99999 88998877654445688889999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--cccCCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQT 276 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~gt 276 (447)
+....++|+|||++...... .....|+
T Consensus 129 ---------------------------------------------------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05607 129 ---------------------------------------------------DDQGNCRLSDLGLAVELKDGKTITQRAGT 157 (277)
T ss_pred ---------------------------------------------------cCCCCEEEeeceeeeecCCCceeeccCCC
Confidence 33567999999998654432 2334688
Q ss_pred CCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhccc
Q 013220 277 RQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 356 (447)
Q Consensus 277 ~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 356 (447)
..|+|||++.+..++.++|+|||||++|+|++|..||...... ...........
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~--------------------- 211 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-----VAKEELKRRTL--------------------- 211 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-----hhHHHHHHHhh---------------------
Confidence 9999999999888999999999999999999999999654211 00001100000
Q ss_pred chhhhhhhcccCchhHHhhhhcC-CChhhHHHHHHHHhhccccCCCCCCCh----HHHhcCccccccc
Q 013220 357 GDLKRIRRLKFWSLDRLLVDKYR-FSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLRN 419 (447)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ll~~~L~~dP~kRpta----~elL~hp~f~~~~ 419 (447)
..... .....+.++.+||.+||+.||++||++ ++++.||||+..+
T Consensus 212 ------------------~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 212 ------------------EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred ------------------ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 00000 012346678999999999999999999 6788999998754
No 117
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.3e-38 Score=308.77 Aligned_cols=289 Identities=26% Similarity=0.416 Sum_probs=213.9
Q ss_pred cCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 29 ~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
.++.+ ++|++.++||+|+||.||+|.+..++..||+|.+.... .....+.+|+++++.+ .|++|+++++
T Consensus 7 ~~~~~--~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~ 78 (310)
T cd07865 7 FCDEV--SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL------KHENVVNLIE 78 (310)
T ss_pred ccchh--hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC------CCCCccceEE
Confidence 45555 57999999999999999999999999999999775432 1223456799999999 7889999998
Q ss_pred cccccCC----CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecC
Q 013220 106 HFKHAGP----NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTI 181 (447)
Q Consensus 106 ~~~~~~~----~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~ 181 (447)
++..... .....++||||+++++.+.+.... ..+++..+..++.|++.||+|||++ |++|+||||+||++
T Consensus 79 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~---- 152 (310)
T cd07865 79 ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILI---- 152 (310)
T ss_pred EEecccccccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEE----
Confidence 8765421 234689999999888887775432 3589999999999999999999996 99999999999999
Q ss_pred CCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecC
Q 013220 182 DPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFG 261 (447)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg 261 (447)
+....++|+|||
T Consensus 153 --------------------------------------------------------------------~~~~~~kl~dfg 164 (310)
T cd07865 153 --------------------------------------------------------------------TKDGILKLADFG 164 (310)
T ss_pred --------------------------------------------------------------------CCCCcEEECcCC
Confidence 335679999999
Q ss_pred ccccccccc-------ccCCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 262 NACRANKQF-------AEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 262 ~a~~~~~~~-------~~~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
.+....... ....++..|+|||.+.+.. ++.++|+|||||++|+|++|..||... +.......+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~------~~~~~~~~~~~ 238 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN------TEQHQLTLISQ 238 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHH
Confidence 986543221 2335678899999987654 688999999999999999999999765 34556667777
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
+.|..+..+....... +.++..... ........... .+...+..+.+||.+||+.||++|||++++|+||
T Consensus 239 ~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~l-~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~ 308 (310)
T cd07865 239 LCGSITPEVWPGVDKL-ELFKKMELP--------QGQKRKVKERL-KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD 308 (310)
T ss_pred HhCCCChhhcccccch-hhhhhccCC--------CccchhhHHhc-ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence 7888776653222111 111110000 00000000000 0111245678999999999999999999999999
Q ss_pred cc
Q 013220 414 WL 415 (447)
Q Consensus 414 ~f 415 (447)
||
T Consensus 309 ~f 310 (310)
T cd07865 309 FF 310 (310)
T ss_pred CC
Confidence 98
No 118
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3e-39 Score=320.80 Aligned_cols=244 Identities=25% Similarity=0.340 Sum_probs=191.7
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHH-HHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEV-LSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~-l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.||+|+||+||+|++..+++.||+|++..... ....+..|..+ ++.+ +|+||+++++.+.. .+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~------~hp~iv~~~~~~~~----~~~ 70 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV------KHPFLVGLHYSFQT----TEK 70 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC------CCCCCccEEEEEec----CCE
Confidence 468999999999999999999999998875432 22344445443 4445 89999999988875 368
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.|+||||+ +++|...+... ..+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 71 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll------------------ 129 (325)
T cd05604 71 LYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILL------------------ 129 (325)
T ss_pred EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEE------------------
Confidence 99999999 88888776543 4589999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---ccccc
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAE 272 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~ 272 (447)
+..+.++|+|||++.... .....
T Consensus 130 ------------------------------------------------------~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (325)
T cd05604 130 ------------------------------------------------------DSQGHVVLTDFGLCKEGIAQSDTTTT 155 (325)
T ss_pred ------------------------------------------------------CCCCCEEEeecCCcccCCCCCCCccc
Confidence 445679999999986432 22234
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
.+|++.|+|||++.+..++.++|||||||++|+|++|..||...+ .......+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~~~~--------------------- 208 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD------VAEMYDNI--------------------- 208 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC------HHHHHHHH---------------------
Confidence 578999999999999889999999999999999999999997542 11111111
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh----HHHhcCcccccc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLR 418 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta----~elL~hp~f~~~ 418 (447)
.......+...+..+.++|.+||+.||.+||++ .++++||||...
T Consensus 209 ---------------------~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 209 ---------------------LHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred ---------------------HcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 111111223346678899999999999999987 589999999864
No 119
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2e-38 Score=316.06 Aligned_cols=291 Identities=29% Similarity=0.500 Sum_probs=224.1
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+++|.+.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ +|+||+++++.|....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~ 77 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF------KHDNIIAIRDILRPPG 77 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc------CCCCccCHHHhccccC
Confidence 378999999999999999999999999999999876542 2345677899999999 7899999999887665
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.....+++||||++++|.+++... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 78 ~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~-------------- 140 (334)
T cd07855 78 ADFKDVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLV-------------- 140 (334)
T ss_pred CCCceEEEEEehhhhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE--------------
Confidence 556789999999977888887543 3489999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+..+.++|+|||.+......
T Consensus 141 ----------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 141 ----------------------------------------------------------NEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred ----------------------------------------------------------cCCCcEEecccccceeecccCc
Confidence 34677999999998654321
Q ss_pred -----cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 -----FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 -----~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
....+++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...+ ....+..+....|..+..+.
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~------~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN------YVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC------hHHHHHHHHHHhCCChhHhh
Confidence 123468899999999876 457899999999999999999999997653 45567777778888776653
Q ss_pred hCCCCc--cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 344 IGGAQS--KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 344 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
...... ..+++..+ ......+.. .....+..+.+||.+||+.+|++|||+++++.||||......
T Consensus 237 ~~~~~~~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 237 NRIGSDRVRKYIQNLP------RKQPVPWSK-------IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred hhhchhhHHHHHhhcc------cCCCCCHHH-------HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 221110 00000000 000000000 112346789999999999999999999999999999977655
Q ss_pred cccc
Q 013220 422 RDET 425 (447)
Q Consensus 422 ~~~~ 425 (447)
....
T Consensus 304 ~~~~ 307 (334)
T cd07855 304 DDEP 307 (334)
T ss_pred cccc
Confidence 5433
No 120
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.1e-39 Score=319.17 Aligned_cols=244 Identities=25% Similarity=0.347 Sum_probs=191.7
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHH-HHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIE-VLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.||+|+||+||+|++..+++.||+|++..... ....+..|.. +++.+ .|+||+++++.+.. .+.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~------~h~~Iv~~~~~~~~----~~~ 70 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV------KHPFLVGLHFSFQT----ADK 70 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC------CCCCCCceeEEEEc----CCe
Confidence 468999999999999999999999998875432 1223333433 34455 88999999998874 368
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.|+||||+ +++|...+... ..+.+..++.++.||+.||+|||++ ||+||||||+||++
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili------------------ 129 (325)
T cd05602 71 LYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILL------------------ 129 (325)
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEE------------------
Confidence 99999999 88898887653 3488899999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---ccccc
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAE 272 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~ 272 (447)
+.++.++|+|||++.... .....
T Consensus 130 ------------------------------------------------------~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 130 ------------------------------------------------------DSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred ------------------------------------------------------CCCCCEEEccCCCCcccccCCCCccc
Confidence 345679999999986432 22234
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
.+||+.|+|||++.+..++.++|||||||++|+|++|..||...+ .......+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i--------------------- 208 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNI--------------------- 208 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC------HHHHHHHH---------------------
Confidence 578999999999999889999999999999999999999997542 11111111
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChH----HHhcCcccccc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ----QCLQHPWLSLR 418 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~----elL~hp~f~~~ 418 (447)
.......+...+..+.++|.+||+.||.+|+++. ++++|+||...
T Consensus 209 ---------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 209 ---------------------LNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred ---------------------HhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 1111123344567899999999999999999876 89999999754
No 121
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=282.24 Aligned_cols=280 Identities=30% Similarity=0.436 Sum_probs=225.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.+|.-.++||+|+||+||+|++..+++.||+|....+.. -.....+|+-+++.+ .|.|||+++++....
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel------khknivrl~dvlhsd-- 73 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL------KHKNIVRLHDVLHSD-- 73 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh------hhcceeehhhhhccC--
Confidence 357778999999999999999999999999997665432 245788999999999 788999999998753
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..+.+|+|||..+|..++.+.. ..++.+.++.++.|++.||.|+|++ ++.|||+||+|.++
T Consensus 74 --kkltlvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnlli--------------- 134 (292)
T KOG0662|consen 74 --KKLTLVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLI--------------- 134 (292)
T ss_pred --ceeEEeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEe---------------
Confidence 6899999999999999887654 4689999999999999999999997 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccccc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAE 272 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 272 (447)
..++.+||+|||++.-.+-+...
T Consensus 135 ---------------------------------------------------------n~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 135 ---------------------------------------------------------NRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred ---------------------------------------------------------ccCCcEEecccchhhhcCCceEe
Confidence 55788999999999776655433
Q ss_pred ---CCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHh-hCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 273 ---EIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 273 ---~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.+-|.+|++|.++++. .|++..|+||.||++.++. +|+..|++.+ -.+++..++.++|.+.++-+....
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d------vddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND------VDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc------HHHHHHHHHHHhCCCccccCCccc
Confidence 3679999999999986 5899999999999999997 5888888774 678899999999998876543333
Q ss_pred Cccchhcccchhhhhhhc-ccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 348 QSKDYFDRHGDLKRIRRL-KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
+..+| ..++-. ...++.++ -+.....-+|++.++|.-+|..|++|+.+|+||||.+..
T Consensus 232 ~lpdy-------k~yp~ypattswsqi-------vp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 232 KLPDY-------KPYPIYPATTSWSQI-------VPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred cCCCC-------cccCCccccchHHHH-------hhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 33222 111100 00112221 123344677999999999999999999999999999754
No 122
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.2e-38 Score=309.16 Aligned_cols=251 Identities=28% Similarity=0.436 Sum_probs=208.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+++++.+ +|+||+++++.+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~-- 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI------RHPFLVNLYGSFQD-- 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCccceeeEEEc--
Confidence 36999999999999999999999999999999886542 2345688899999999 78999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+. ||+|+||+|+||++
T Consensus 73 --~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili------------- 134 (290)
T cd05580 73 --DSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLL------------- 134 (290)
T ss_pred --CCeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEE-------------
Confidence 46899999999 89999888654 4589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.++|+|||++.......
T Consensus 135 -----------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 135 -----------------------------------------------------------DSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred -----------------------------------------------------------CCCCCEEEeeCCCccccCCCC
Confidence 335679999999998766555
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+ .......+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~------------------- 210 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN------PIQIYEKI------------------- 210 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH-------------------
Confidence 55678999999999988888899999999999999999999996542 11111111
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
......++...+..+.++|.+||+.||.+|+ +++|+++||||....
T Consensus 211 -----------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 211 -----------------------LEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred -----------------------hcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 1111223444567889999999999999999 999999999998765
No 123
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.6e-38 Score=306.89 Aligned_cols=258 Identities=24% Similarity=0.381 Sum_probs=200.9
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+|++.+.||+|+||.||+|.+..++..||+|++..+ ......+.+|+++++.+ +|+||+++++.+...
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~---- 71 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC------DSPYIIGFYGAFFVE---- 71 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC------CCCCeeeEEEEEEEC----
Confidence 688999999999999999999999999999987643 23345788899999998 789999999998854
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ ++++... ..+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 72 ~~~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill---------------- 128 (279)
T cd06619 72 NRISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLV---------------- 128 (279)
T ss_pred CEEEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEE----------------
Confidence 6789999999 6666432 2378888999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-ccc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAE 272 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-~~~ 272 (447)
+....++|+|||++...... ...
T Consensus 129 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 152 (279)
T cd06619 129 --------------------------------------------------------NTRGQVKLCDFGVSTQLVNSIAKT 152 (279)
T ss_pred --------------------------------------------------------CCCCCEEEeeCCcceecccccccC
Confidence 33567999999999754433 344
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
.+++..|+|||.+.+..++.++|+|||||++|+|++|..||........... ............+.
T Consensus 153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~------------ 218 (279)
T cd06619 153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM--PLQLLQCIVDEDPP------------ 218 (279)
T ss_pred CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc--hHHHHHHHhccCCC------------
Confidence 5789999999999988899999999999999999999999965421110000 00000000000000
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~ 422 (447)
.......+.++.+||.+||+.||++||+++++++||||+..+...
T Consensus 219 -------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~ 263 (279)
T cd06619 219 -------------------------VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263 (279)
T ss_pred -------------------------CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCcc
Confidence 000122356789999999999999999999999999998765443
No 124
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-38 Score=311.75 Aligned_cols=285 Identities=26% Similarity=0.394 Sum_probs=213.8
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.++|++.+.||.|+||.||+|.+..++..||+|.++.... ......+|+++++.+ .|+||+++++++...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~~- 78 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL------RHPNIVELKEVVVGK- 78 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC------CCCCCcceEEEEecC-
Confidence 3689999999999999999999999999999998764422 122456799999999 788999999988653
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.....++||||++++|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||++
T Consensus 79 -~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~-------------- 141 (309)
T cd07845 79 -HLDSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLL-------------- 141 (309)
T ss_pred -CCCeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE--------------
Confidence 335789999999878888876533 4589999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....++|+|||.+......
T Consensus 142 ----------------------------------------------------------~~~~~~kL~dfg~~~~~~~~~~ 163 (309)
T cd07845 142 ----------------------------------------------------------TDKGCLKIADFGLARTYGLPAK 163 (309)
T ss_pred ----------------------------------------------------------CCCCCEEECccceeeecCCccC
Confidence 33567999999998755432
Q ss_pred -cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||... +.......+.+..+..+..+.....
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 164 PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK------SEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCChhhchhhh
Confidence 222345788999999876 45789999999999999999999999765 3555666666766665544321110
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
... .. ... .........+.. .....+..+.+||.+||++||++|||++|+|+||||+...
T Consensus 238 ~~~-~~---~~~-~~~~~~~~~~~~-------~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 238 DLP-LV---GKF-TLPKQPYNNLKH-------KFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred ccc-cc---ccc-cccCCCCCchHH-------hccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 000 00 000 000000000000 0112366788999999999999999999999999998654
No 125
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3e-38 Score=330.82 Aligned_cols=258 Identities=23% Similarity=0.290 Sum_probs=204.7
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+++|++.+.||+|+||+||+|++..+++.||||++... ......+.+|+.++..+ .|++|++++..+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~------~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC------DFFSIVKCHEDFAKKD 104 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC------CCCcEEEeecceeccc
Confidence 47999999999999999999999999999999987643 23345677888888877 7899999888776432
Q ss_pred CC----cceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 112 PN----GQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 112 ~~----~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
.. ...+++||||+ +++|.+.+.... ...+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl------- 176 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILL------- 176 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEE-------
Confidence 21 12578999999 889998875432 24588999999999999999999996 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+.+..+||+|||++.
T Consensus 177 -----------------------------------------------------------------~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 177 -----------------------------------------------------------------CSNGLVKLGDFGFSK 191 (496)
T ss_pred -----------------------------------------------------------------eCCCCEEEEecccCe
Confidence 335679999999986
Q ss_pred ccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 265 RANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 265 ~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
..... ....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+ ....+..+.. +.
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~~--~~-- 261 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTLA--GR-- 261 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhc--CC--
Confidence 54321 233578999999999999889999999999999999999999996542 1111111100 00
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
...++...++++.+|+.+||+.||.+||++.++|+|||++..
T Consensus 262 -------------------------------------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 262 -------------------------------------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred -------------------------------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 011334456789999999999999999999999999998764
No 126
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.1e-37 Score=304.11 Aligned_cols=284 Identities=27% Similarity=0.447 Sum_probs=209.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||.|+||.||+|.+..+++.||+|.++.... ....+.+|+++++.+. +|+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-----ESIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc-----CCCCccceeeeEeecCC
Confidence 479999999999999999999999999999998765432 2346788999999985 57899999998875432
Q ss_pred -CcceEEEEEecccccHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 113 -NGQHLCMVLEFLGDSLLRLIKYSR---YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 113 -~~~~~~lvmE~~~~~L~~~~~~~~---~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
.....|+||||+.+++.+.+.... ...+++..+..++.||+.||+|||++ ||+||||+|+||+++.
T Consensus 76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~--------- 145 (295)
T cd07837 76 NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDK--------- 145 (295)
T ss_pred CCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEec---------
Confidence 223589999999778888775432 23579999999999999999999996 9999999999999932
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
....++|+|||.+.....
T Consensus 146 --------------------------------------------------------------~~~~~kl~dfg~~~~~~~ 163 (295)
T cd07837 146 --------------------------------------------------------------QKGLLKIADLGLGRAFSI 163 (295)
T ss_pred --------------------------------------------------------------CCCeEEEeecccceecCC
Confidence 145799999999865433
Q ss_pred cc---ccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 269 QF---AEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 269 ~~---~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
.. ....+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||... +.......+.+.++..+.....
T Consensus 164 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 164 PVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD------SELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred CccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHHHhCCCChhhCc
Confidence 21 22356888999999876 45789999999999999999999999765 3444455555555544433211
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
......... .. .......... .....+..+.+||.+||+.||.+|||++|+|.||||.
T Consensus 238 ~~~~~~~~~-~~---------~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 238 GVSKLRDWH-EF---------PQWKPQDLSR----AVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred chhhccchh-hc---------CcccchhHHH----hccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 111000000 00 0000000000 1123466889999999999999999999999999985
No 127
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.2e-38 Score=309.90 Aligned_cols=297 Identities=25% Similarity=0.380 Sum_probs=212.8
Q ss_pred ceEEEEeecccCceEEEEEEeCC--CCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTR--TSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
+|.+.++||+|+||.||+|.+.. ++..||+|.+.... .......+|+++++.+ +|+||+++++.+...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL------KHENVVSLVEVFLEH 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc------CCCCccceEEEEeCC
Confidence 58999999999999999999988 89999999877632 2345678899999998 789999999998764
Q ss_pred CCCcceEEEEEecccccHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 111 GPNGQHLCMVLEFLGDSLLRLIKYSRY---KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 111 ~~~~~~~~lvmE~~~~~L~~~~~~~~~---~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
....+++||||+++++.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||++....
T Consensus 75 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~------ 145 (316)
T cd07842 75 --ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEG------ 145 (316)
T ss_pred --CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCC------
Confidence 3468999999998788877654321 2578899999999999999999996 999999999999994310
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+....++|+|||++....
T Consensus 146 --------------------------------------------------------------~~~~~~kl~Dfg~~~~~~ 163 (316)
T cd07842 146 --------------------------------------------------------------PERGVVKIGDLGLARLFN 163 (316)
T ss_pred --------------------------------------------------------------CccceEEECCCccccccC
Confidence 225779999999987554
Q ss_pred ccc------ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCC---CCchHHHHHHHHHhCC
Q 013220 268 KQF------AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGF---CEDEDHLALMMELIGK 337 (447)
Q Consensus 268 ~~~------~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~g~ 337 (447)
... ....++..|+|||.+.+. .++.++|+|||||++|+|++|..||........ ......+..+...++.
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (316)
T cd07842 164 APLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGT 243 (316)
T ss_pred CCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCC
Confidence 322 223578899999998764 578999999999999999999999986643221 1123345555666665
Q ss_pred CCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 338 MPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.+...........++..... ...........+..... .....+..+.++|.+||+.||++|||+.|++.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 244 PTEKDWPDIKKMPEYDTLMK-DFKTKTYPSNSLAKWME----KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CchhHHHHHhhcccchhhhh-hccCCCCCCccHHHHHH----hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 55433211111111110000 00000000001111100 001345688999999999999999999999999998
No 128
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=328.26 Aligned_cols=248 Identities=30% Similarity=0.461 Sum_probs=206.9
Q ss_pred eecccCceEEEEEEeCCCCeEEEEEEe-chhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEE
Q 013220 43 KLGWGQFSIVWLAYDTRTSSYVALKIQ-KSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVL 121 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvm 121 (447)
.||+|+||+||.|+|..+...+|||-+ ..+.+..+-+..|+.+.+.| .|.|||+|++++-.. .++-|.|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L------rHkNIVrYLGs~sen----Gf~kIFM 651 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL------RHKNIVRYLGSVSEN----GFFKIFM 651 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH------hhHhHHHHhhccCCC----CeEEEEe
Confidence 489999999999999999999999955 45567778899999999999 789999999997643 4889999
Q ss_pred ecc-cccHHHHHHhhccCCC--CHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 122 EFL-GDSLLRLIKYSRYKGL--ELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 122 E~~-~~~L~~~~~~~~~~~l--~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
|.+ ||+|.+++...+ .++ ++.+...+.+||++||+|||.+ .|||||||.+|+|+...
T Consensus 652 EqVPGGSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDNVLvNTy------------------ 711 (1226)
T KOG4279|consen 652 EQVPGGSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDNVLVNTY------------------ 711 (1226)
T ss_pred ecCCCCcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCcEEEeec------------------
Confidence 999 999999987644 677 8889999999999999999997 99999999999999542
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--cccc-cCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFA-EEIQ 275 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--~~~~-~~~g 275 (447)
.+-+|++|||.+++.. .+.+ .+.|
T Consensus 712 -----------------------------------------------------SGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 712 -----------------------------------------------------SGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred -----------------------------------------------------cceEEecccccchhhccCCcccccccc
Confidence 4669999999998654 3333 4579
Q ss_pred CCCccChHHhhcC--CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 276 TRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 276 t~~y~aPE~l~~~--~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
|..|||||++..+ .|+.++|||||||++.+|.||++||..... . + +-|+++ |
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs------p-q-AAMFkV-G----------------- 792 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS------P-Q-AAMFKV-G----------------- 792 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC------h-h-Hhhhhh-c-----------------
Confidence 9999999999876 488999999999999999999999975421 0 1 111111 0
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
+...-+++|.+.+.++..||.+|+.+||.+||+|+++|.+||++..
T Consensus 793 -------------------myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 793 -------------------MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred -------------------ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 1112335788999999999999999999999999999999999976
No 129
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.2e-39 Score=317.42 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=191.6
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHH-HHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIE-VLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.||+|+||.||+|++..+++.||+|++..... ....+..|.. +++.+ .|+||+++++.+.. ...
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~------~h~~iv~~~~~~~~----~~~ 70 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL------KHPFLVGLHYSFQT----AEK 70 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC------CCCCccceeeEEEc----CCE
Confidence 468999999999999999999999998865432 2233444443 45556 89999999988874 368
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.|+||||+ +++|...+... ..+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 71 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll------------------ 129 (321)
T cd05603 71 LYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILL------------------ 129 (321)
T ss_pred EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEE------------------
Confidence 99999999 78888777543 4588999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---ccccc
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAE 272 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~ 272 (447)
+..+.+||+|||++.... .....
T Consensus 130 ------------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 130 ------------------------------------------------------DSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred ------------------------------------------------------CCCCCEEEccCCCCccCCCCCCcccc
Confidence 445679999999986432 22234
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
.+|++.|+|||++.+..++.++|||||||++|+|++|..||...+ ... +.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~----~~~------------------- 206 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------VSQ----MYD------------------- 206 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC------HHH----HHH-------------------
Confidence 578999999999998889999999999999999999999997542 111 111
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh----HHHhcCcccccc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLR 418 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta----~elL~hp~f~~~ 418 (447)
.+......++...+..+.++|.+||+.||.+||++ .++++||||...
T Consensus 207 -------------------~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 207 -------------------NILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred -------------------HHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 11111222344456788999999999999999976 599999999754
No 130
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.8e-38 Score=305.74 Aligned_cols=281 Identities=28% Similarity=0.477 Sum_probs=209.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.+.||.|++|.||+|++..+++.||+|.+..... ....+.+|+++++.+ +|+||+++++++..
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~---- 74 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL------KHANIVTLHDIIHT---- 74 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC------CCcceeeEEEEEec----
Confidence 679999999999999999999988999999998764322 224567899999999 78999999998874
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
.+..++||||++++|.+.+.... ..+++..++.++.|++.||.|||+. ||+|+||||+||++
T Consensus 75 ~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~---------------- 136 (291)
T cd07844 75 KKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLI---------------- 136 (291)
T ss_pred CCeEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEE----------------
Confidence 47899999999778888775433 3588999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+..+.++|+|||.+...... .
T Consensus 137 --------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 137 --------------------------------------------------------SERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred --------------------------------------------------------cCCCCEEECccccccccCCCCccc
Confidence 33567999999998654321 1
Q ss_pred ccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+ ..++.++|+||+||++|+|++|..||.... .....+..+.+..+.............
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST-----DVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc-----cHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 22346788999999876 457899999999999999999999996553 234555666666666554442222211
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+...... ......+........ ....+.++|.+||+.+|++|||+.++|+||||
T Consensus 236 ~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 236 PEFKPYSFP--------FYPPRPLINHAPRLD--RIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccc--------ccCChhHHHhCcCCC--CchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 111110000 000000100000111 12578899999999999999999999999998
No 131
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.2e-39 Score=320.37 Aligned_cols=246 Identities=25% Similarity=0.375 Sum_probs=190.3
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||+|+||+||+|++..+++.||+|++..... .......|..++..... .+|++|++++..+... ...|+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~~p~i~~~~~~~~~~----~~~~l 73 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLL---DESPFIVGLKFSFQTD----SDLYL 73 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhcc---CCCCcCcceEEEEecC----CeEEE
Confidence 6999999999999999999999998865432 12234456666655422 2689999999988753 68999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|...+... ..+++..++.++.||+.||+|||++ ||+||||||+|||+
T Consensus 74 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili--------------------- 129 (330)
T cd05586 74 VTDYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILL--------------------- 129 (330)
T ss_pred EEcCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEE---------------------
Confidence 99999 88888877643 4589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cccccCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQ 275 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~~g 275 (447)
+....++|+|||++.... ......+|
T Consensus 130 ---------------------------------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g 158 (330)
T cd05586 130 ---------------------------------------------------DATGHIALCDFGLSKANLTDNKTTNTFCG 158 (330)
T ss_pred ---------------------------------------------------CCCCCEEEecCCcCcCCCCCCCCccCccC
Confidence 335679999999986432 22234578
Q ss_pred CCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhc
Q 013220 276 TRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 354 (447)
Q Consensus 276 t~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 354 (447)
|..|+|||++.+. .++.++|||||||++|+|++|..||...+ .......+.
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~------~~~~~~~i~---------------------- 210 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED------TQQMYRNIA---------------------- 210 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC------HHHHHHHHH----------------------
Confidence 9999999999765 47899999999999999999999997542 111111110
Q ss_pred ccchhhhhhhcccCchhHHhhhhcCCCh-hhHHHHHHHHhhccccCCCCCC----ChHHHhcCccccccc
Q 013220 355 RHGDLKRIRRLKFWSLDRLLVDKYRFSE-TDAREFAEFLVPLLDFTPEKRP----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~kRp----ta~elL~hp~f~~~~ 419 (447)
.....++. ..+..+.+||.+||+.||.+|| ++.++++||||....
T Consensus 211 --------------------~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 211 --------------------FGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred --------------------cCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 00011111 2356888999999999999998 799999999998643
No 132
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.8e-38 Score=306.63 Aligned_cols=277 Identities=27% Similarity=0.481 Sum_probs=209.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.+.||.|++|.||+|++..++..||||.+..... ....+.+|+++++.+ +|+||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~---- 70 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPNIVKLLDVIHT---- 70 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc------CCCCCcchhhhccc----
Confidence 48999999999999999999998999999998764422 234678899999999 78999999999874
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+...++||||+.++|.+.+.......+++..+..++.|++.||+|||+. |++|+||+|+||++
T Consensus 71 ~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill---------------- 133 (284)
T cd07860 71 ENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLI---------------- 133 (284)
T ss_pred CCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE----------------
Confidence 4689999999977888877655445689999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||.+...... .
T Consensus 134 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 157 (284)
T cd07860 134 --------------------------------------------------------NTEGAIKLADFGLARAFGVPVRTY 157 (284)
T ss_pred --------------------------------------------------------CCCCCEEEeeccchhhcccCcccc
Confidence 34567999999998654332 2
Q ss_pred ccCCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+.. ++.++|+|||||++|+|++|..||... +.......+.+..+..+..+.......
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD------SEIDQLFRIFRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence 2335688999999887654 588999999999999999999999765 344555556666665554332111100
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+.... .......... ....++..+.++|.+||+.||++|||++++|+||||
T Consensus 232 ~~~~~~~------~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 232 PDYKPSF------PKWARQDFSK-------VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHhhc------ccccccCHHH-------HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0000000 0000000011 112345678899999999999999999999999998
No 133
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.5e-38 Score=314.50 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=192.6
Q ss_pred CCceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.++||.|+||.||+|.+. .++..||+|+++.. ......+.+|+++++.+. +|+||+++++++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~~ 80 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-----NHLNVVNLLGAC 80 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-----cCcceeeEEeEe
Confidence 478999999999999999999742 34578999987643 233457889999999985 789999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc--------------------------------------------------
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR-------------------------------------------------- 136 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~-------------------------------------------------- 136 (447)
... +..++++|||+ +++|.+++....
T Consensus 81 ~~~---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T cd05102 81 TKP---NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGST 157 (338)
T ss_pred cCC---CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccc
Confidence 643 35789999999 889988875421
Q ss_pred ----------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCC
Q 013220 137 ----------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGG 206 (447)
Q Consensus 137 ----------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (447)
...+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~----------------------------- 207 (338)
T cd05102 158 NPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILL----------------------------- 207 (338)
T ss_pred ccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEE-----------------------------
Confidence 12367788899999999999999997 99999999999999
Q ss_pred CCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-----ccCCCCCCccC
Q 013220 207 STSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRA 281 (447)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~a 281 (447)
+....++|+|||++....... ....++..|+|
T Consensus 208 -------------------------------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 208 -------------------------------------------SENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred -------------------------------------------cCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 335679999999986543211 12235678999
Q ss_pred hHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhh
Q 013220 282 PEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 360 (447)
Q Consensus 282 PE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 360 (447)
||++.+..++.++|||||||++|+|++ |..||..... .......+.. +
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~-----~~~~~~~~~~--~------------------------ 293 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-----NEEFCQRLKD--G------------------------ 293 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHhc--C------------------------
Confidence 999998889999999999999999997 9999975421 1111100000 0
Q ss_pred hhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 361 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...++.+.+||.+||+.||++|||+.|+++
T Consensus 294 ---------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 294 ---------------TRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred ---------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 001123345668999999999999999999999975
No 134
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.4e-38 Score=312.58 Aligned_cols=286 Identities=28% Similarity=0.467 Sum_probs=213.3
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC-
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG- 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~- 111 (447)
+++|++.++||+|+||.||+|++..+++.||+|.+... ......+.+|+++++.+ .|+||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~ 77 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF------KHENIIGILDIIRPPSF 77 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC------CCCCcCchhheeecccc
Confidence 37899999999999999999999999999999987532 23445677899999999 7889999998765432
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.....++++|||+++++.+.+.. ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 78 ~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill-------------- 139 (336)
T cd07849 78 ESFNDVYIVQELMETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLL-------------- 139 (336)
T ss_pred cccceEEEEehhcccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEE--------------
Confidence 13357899999998888877743 3489999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+..+.++|+|||++......
T Consensus 140 ----------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~ 161 (336)
T cd07849 140 ----------------------------------------------------------NTNCDLKICDFGLARIADPEHD 161 (336)
T ss_pred ----------------------------------------------------------CCCCCEEECcccceeecccccc
Confidence 34567999999998654321
Q ss_pred ----cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 270 ----FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...+ .......+...++..+.+...
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD------YLHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCCHHHHH
Confidence 123467899999998765 467899999999999999999999997652 344556666666655433211
Q ss_pred CCCC--ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 345 GGAQ--SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 345 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
.... ...++.... ......+.. .....+..+.+||.+||+.||++|||+.|+++||||......
T Consensus 236 ~~~~~~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 236 CIISLRARNYIKSLP------FKPKVPWNK-------LFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred HhhchhhhhHHhhcC------cCCcccHHH-------HhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 1100 000000000 000000000 012235678999999999999999999999999999976543
No 135
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=9.2e-38 Score=305.34 Aligned_cols=283 Identities=31% Similarity=0.485 Sum_probs=214.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH------hHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ------FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
+|++.+.||.|+||.||+|.+..+++.||+|.++.... ....+.+|+++++.+ .|+||+++++++..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~- 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL------KHPNIIGLLDVFGH- 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc------CCCCChhhhheeec-
Confidence 58999999999999999999998999999998765432 234567899999998 78999999999875
Q ss_pred CCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 111 GPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 111 ~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
.+..++||||++++|.+.+.... ..+++..+..++.||+.||+|||++ ||+|+||+|+||++
T Consensus 74 ---~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill------------- 135 (298)
T cd07841 74 ---KSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLI------------- 135 (298)
T ss_pred ---CCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEE-------------
Confidence 46899999999888988886533 3589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+..+.++|+|||++......
T Consensus 136 -----------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 136 -----------------------------------------------------------ASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred -----------------------------------------------------------cCCCCEEEccceeeeeccCCC
Confidence 33567999999999765432
Q ss_pred --cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCC
Q 013220 270 --FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 346 (447)
Q Consensus 270 --~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (447)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||... .+......+.+.++..........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGD------SDIDQLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCC------ccHHHHHHHHHHcCCCchhhhhhc
Confidence 222356788999999865 45789999999999999999997777654 244455555555555444332111
Q ss_pred CCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcc
Q 013220 347 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~ 423 (447)
.....+..... ....... ......+..+.+||.+||..||++|||++|+|.||||+.....+.
T Consensus 231 ~~~~~~~~~~~-------~~~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 231 TSLPDYVEFKP-------FPPTPLK-------QIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred ccccccccccc-------cCCcchh-------hhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 11111100000 0000000 012334678999999999999999999999999999998765553
No 136
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-38 Score=333.12 Aligned_cols=296 Identities=21% Similarity=0.276 Sum_probs=202.8
Q ss_pred cccCccccCCceEEEEeecccCceEEEEEEeCCC-CeEEE------------------EEEechhHHhHHHHHHHHHHHH
Q 013220 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRT-SSYVA------------------LKIQKSAAQFAQAALHEIEVLS 87 (447)
Q Consensus 27 ~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~-~~~va------------------iK~~~~~~~~~~~~~~E~~~l~ 87 (447)
+..|+.+. ++|++.++||+|+||+||+|..... +..++ +|..+........+.+|+++++
T Consensus 140 ~~~~~~~~-~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~ 218 (501)
T PHA03210 140 LKHDDEFL-AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALG 218 (501)
T ss_pred cccchhhh-hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHH
Confidence 34455554 6899999999999999999865432 11111 2222222334556789999999
Q ss_pred HhhcCCCCCcceeeeecccccccCCCcceEEEEEecccccHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q 013220 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSR---YKGLELNKVREICKYILTGLDYLHRELG 164 (447)
Q Consensus 88 ~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~---~~~l~~~~~~~i~~qil~aL~~lH~~~g 164 (447)
.+ +|+||+++++++... +..|+||+++++++..++.... ........++.++.||+.||+|||++ |
T Consensus 219 ~l------~HpnIv~l~~~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-g 287 (501)
T PHA03210 219 RL------NHENILKIEEILRSE----ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-K 287 (501)
T ss_pred hC------CCCCcCcEeEEEEEC----CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-C
Confidence 99 889999999998754 6789999999888887764322 11234567888999999999999996 9
Q ss_pred cccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCC
Q 013220 165 IIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKP 244 (447)
Q Consensus 165 IiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (447)
|+||||||+|||+
T Consensus 288 IiHrDLKP~NILl------------------------------------------------------------------- 300 (501)
T PHA03210 288 LIHRDIKLENIFL------------------------------------------------------------------- 300 (501)
T ss_pred eecCCCCHHHEEE-------------------------------------------------------------------
Confidence 9999999999999
Q ss_pred CccCCCcccceeEeecCccccccccc----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCC
Q 013220 245 ERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQG 320 (447)
Q Consensus 245 ~~~~~~~~~~~kL~Dfg~a~~~~~~~----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~ 320 (447)
+..+.+||+|||++....... ...+||..|+|||++.+..++.++|||||||++|+|++|.+++.....
T Consensus 301 -----~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~-- 373 (501)
T PHA03210 301 -----NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG-- 373 (501)
T ss_pred -----CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC--
Confidence 335679999999997654321 235789999999999998899999999999999999998765443321
Q ss_pred CCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCC
Q 013220 321 FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTP 400 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP 400 (447)
.....++..+...++....++... ....|+....... . .........+. .. ..+..+.++|.+||++||
T Consensus 374 -~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~i~~~~~-~-~~~~~~~~~~~-~~----~~~~~~~~li~kmL~~DP 442 (501)
T PHA03210 374 -GKPGKQLLKIIDSLSVCDEEFPDP---PCKLFDYIDSAEI-D-HAGHSVPPLIR-NL----GLPADFEYPLVKMLTFDW 442 (501)
T ss_pred -CCHHHHHHHHHHhcccChhhcCCc---HHHHHHHhhhhhc-c-cCccchhhHHH-hc----CCChHHHHHHHHHhccCc
Confidence 123344455555444433332110 0011111100000 0 00001111111 11 134568899999999999
Q ss_pred CCCCChHHHhcCccccccc
Q 013220 401 EKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 401 ~kRpta~elL~hp~f~~~~ 419 (447)
.+|||+.|+|+||||....
T Consensus 443 ~~Rpsa~elL~hp~f~~~~ 461 (501)
T PHA03210 443 HLRPGAAELLALPLFSAEE 461 (501)
T ss_pred ccCcCHHHHhhChhhhcCC
Confidence 9999999999999998643
No 137
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.5e-38 Score=313.31 Aligned_cols=289 Identities=21% Similarity=0.282 Sum_probs=198.9
Q ss_pred EEEeeccc--CceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 40 AQRKLGWG--QFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 40 l~~~lG~G--~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+.++||+| +|++||++.+..+++.||+|.+.... ...+.+.+|+++++.+ +|+||+++++++...
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l------~hpniv~~~~~~~~~---- 71 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF------NHPNIVPYRATFIAD---- 71 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc------CCCCeeeEEEEEEEC----
Confidence 56789999 67899999999999999999887542 3345778899999998 899999999998754
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ ++++.+++.......+++..++.++.|++.||+|||++ ||+||||||+||++..
T Consensus 72 ~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~-------------- 136 (327)
T cd08227 72 NELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISV-------------- 136 (327)
T ss_pred CEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEec--------------
Confidence 6899999999 78899888654445689999999999999999999996 9999999999999943
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-----
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----- 268 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~----- 268 (447)
...++++||+.+.....
T Consensus 137 ----------------------------------------------------------~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 137 ----------------------------------------------------------DGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred ----------------------------------------------------------CCcEEEcccchhhccccccccc
Confidence 45677888875432210
Q ss_pred -----ccccCCCCCCccChHHhhc--CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 269 -----QFAEEIQTRQYRAPEVILR--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 269 -----~~~~~~gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||..... ... ......+..+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~--~~~~~~~~~~~~ 230 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA------TQM--LLEKLNGTVPCL 230 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch------hHH--HHHHhcCCcccc
Confidence 1112346778999999976 3588999999999999999999999975421 111 111112222211
Q ss_pred hhhCCCCccch------hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 342 IAIGGAQSKDY------FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 342 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
+........+. ................................+..+.+||.+||+.||++|||++|+|+||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f 310 (327)
T cd08227 231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 310 (327)
T ss_pred ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhh
Confidence 10000000000 000000000000000000000000011233456789999999999999999999999999999
Q ss_pred cccc
Q 013220 416 SLRN 419 (447)
Q Consensus 416 ~~~~ 419 (447)
+...
T Consensus 311 ~~~~ 314 (327)
T cd08227 311 KQIK 314 (327)
T ss_pred hhcc
Confidence 8643
No 138
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.1e-38 Score=303.69 Aligned_cols=278 Identities=31% Similarity=0.535 Sum_probs=210.9
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.+.||.|+||.||+|.+..++..||+|.+.... .....+.+|+.+++.+ .|+||+++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~---- 70 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC------QHPYVVKLLDVFPH---- 70 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC------CCCCCcceeeEEec----
Confidence 5899999999999999999999899999999876442 2345788899999999 68999999998875
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+...++||||++++|.+.+.... ..+++..++.++.|++.||+|||+. ||+|+||||+||++
T Consensus 71 ~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~---------------- 132 (286)
T cd07832 71 GSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLI---------------- 132 (286)
T ss_pred CCeeEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEE----------------
Confidence 47899999999999998876433 5689999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc----
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---- 269 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---- 269 (447)
+....++|+|||.+......
T Consensus 133 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 156 (286)
T cd07832 133 --------------------------------------------------------SADGVLKIADFGLARLFSEEEPRL 156 (286)
T ss_pred --------------------------------------------------------cCCCcEEEeeeeecccccCCCCCc
Confidence 33567999999998755432
Q ss_pred cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....++..|+|||.+.+. .++.++|||||||++|+|++|..||... .+......+....+............
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE------NDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC------CHHHHHHHHHHHcCCCChHHHhhccC
Confidence 2344688999999998764 4689999999999999999998888654 34455555666665554322111100
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
.. +. ....+......... ....+.+..+.+||.+||+.||++|||++++|+||||.
T Consensus 231 ~~-------~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 231 LP-------DY---NKITFPESKPIPLE--EIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cc-------hh---hcccCCCCCcchHH--HhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 00 00 00000000000000 01123457899999999999999999999999999994
No 139
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-41 Score=311.01 Aligned_cols=255 Identities=28% Similarity=0.414 Sum_probs=209.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
..|.+.++||+|+||.||+|.++.+|..+|||....+.. .+++..|+.+++.. ..++||+||+.|... .
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-LQEIIKEISIMQQC------~S~yVVKYYGSYFK~----s 101 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-LQEIIKEISIMQQC------KSKYVVKYYGSYFKH----S 101 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-HHHHHHHHHHHHHc------CCchhhhhhhhhccC----C
Confidence 347888999999999999999999999999997665544 78889999999999 789999999987743 4
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
.+|+||||| .|++.+++.. +.+++.+.++..+++..+.||+|||. +.=||||||..|||+
T Consensus 102 DLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~-~~KIHRDIKAGNILL----------------- 162 (502)
T KOG0574|consen 102 DLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHD-LKKIHRDIKAGNILL----------------- 162 (502)
T ss_pred ceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHH-HHHHHhhcccccEEE-----------------
Confidence 799999999 6778877755 44789999999999999999999998 588999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
..++..||+|||.+-...+. ..
T Consensus 163 -------------------------------------------------------NT~G~AKLADFGVAGQLTDTMAKRN 187 (502)
T KOG0574|consen 163 -------------------------------------------------------NTDGIAKLADFGVAGQLTDTMAKRN 187 (502)
T ss_pred -------------------------------------------------------cccchhhhhhccccchhhhhHHhhC
Confidence 44788999999999655433 23
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...||++|+|||++..-.|..++||||||++..+|..|+.||.+.- -+.-++-+-..+|..+
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH---------PMRAIFMIPT~PPPTF--------- 249 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH---------PMRAIFMIPTKPPPTF--------- 249 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc---------ccceeEeccCCCCCCC---------
Confidence 3479999999999999999999999999999999999999996531 1222221111111111
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.-|..-+.+|.||+++||..+|++|.||.++++|||++....
T Consensus 250 ---------------------------~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 250 ---------------------------KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred ---------------------------CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 123344779999999999999999999999999999987543
No 140
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-40 Score=329.23 Aligned_cols=257 Identities=26% Similarity=0.454 Sum_probs=211.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.+-|.++..||.|+||.||+|..+.++...|.|++... ....+++.-|+++|... .||+||++++.|+..
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C------dHP~ivkLl~ayy~e--- 101 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC------DHPVIVKLLSAYYFE--- 101 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC------CChHHHHHHHHHhcc---
Confidence 35578999999999999999999999999999987654 34577899999999999 899999999998864
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..+||+.||| ||....++ -...+++.+.++..+|+|++.||.|||++ +|||||+|..|||++.
T Consensus 102 -nkLwiliEFC~GGAVDaim-lEL~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~Tl------------- 165 (1187)
T KOG0579|consen 102 -NKLWILIEFCGGGAVDAIM-LELGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTL------------- 165 (1187)
T ss_pred -CceEEEEeecCCchHhHHH-HHhccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEe-------------
Confidence 5799999999 55555544 44457899999999999999999999997 9999999999999954
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---cc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQ 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---~~ 269 (447)
++.++|+|||.+..-. +.
T Consensus 166 -----------------------------------------------------------dGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 166 -----------------------------------------------------------DGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred -----------------------------------------------------------cCcEeeecccccccchhHHhh
Confidence 6779999999885332 33
Q ss_pred cccCCCCCCccChHHhh-----cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 270 FAEEIQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
...+.||++|||||+.. ..+|+.++||||||++|.+|..+.+|-.. ...|..++++-...|+.++
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe---------lnpMRVllKiaKSePPTLl- 256 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE---------LNPMRVLLKIAKSEPPTLL- 256 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc---------cchHHHHHHHhhcCCCccc-
Confidence 45678999999999864 46899999999999999999999998743 3355666665544443321
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
-|+.-+..|.|||.+||..||..||+++|+|+||||+...+
T Consensus 257 -----------------------------------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 257 -----------------------------------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred -----------------------------------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 22333668999999999999999999999999999996543
No 141
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.9e-38 Score=301.72 Aligned_cols=258 Identities=29% Similarity=0.437 Sum_probs=204.4
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC--
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP-- 112 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~-- 112 (447)
.++|++.+.||.|++|.||+|++..+++.+++|++.......+.+.+|+++++.+. .|+||+++++.+.....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-----NHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-----CCCChheEEEEEEecCCCC
Confidence 37999999999999999999999888999999998876655677889999999985 68999999999876542
Q ss_pred CcceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
.+...++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. |++|+||+|+||++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~------------ 146 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILL------------ 146 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEE------------
Confidence 356799999999 778888775433 34588999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+....++|+|||.+......
T Consensus 147 ------------------------------------------------------------~~~~~~~l~d~~~~~~~~~~ 166 (275)
T cd06608 147 ------------------------------------------------------------TKNAEVKLVDFGVSAQLDST 166 (275)
T ss_pred ------------------------------------------------------------ccCCeEEECCCccceecccc
Confidence 33567999999988654322
Q ss_pred ---cccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 270 ---FAEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 ---~~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
.....++..|+|||.+.. ..++.++|||||||++|+|++|..||.... . ...+.+.....+..
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~---~~~~~~~~~~~~~~ 237 (275)
T cd06608 167 LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH------P---MRALFKIPRNPPPT 237 (275)
T ss_pred hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc------h---HHHHHHhhccCCCC
Confidence 223467889999999864 246789999999999999999999996432 1 11111111110000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...+...++.+.+||.+||..||++|||++|+++|||+
T Consensus 238 ------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 238 ------------------------------------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ------------------------------------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 00112345688999999999999999999999999996
No 142
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=6.6e-38 Score=303.28 Aligned_cols=277 Identities=30% Similarity=0.462 Sum_probs=210.0
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
|++.++||+|+||.||+|++..++..||+|.++... .......+|+.+++.+. +|+||+++++++... ...
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~--~~~ 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-----PHPNILRLIEVLFDR--KTG 73 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-----CCCCccceEEEEecC--CCC
Confidence 788999999999999999999999999999876542 12224456888888774 689999999998753 335
Q ss_pred eEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 116 HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 116 ~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.+++||||+++++.+.+.... ..+++..+..++.|++.||+|||++ ||+||||+|+||++
T Consensus 74 ~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l------------------ 133 (282)
T cd07831 74 RLALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILI------------------ 133 (282)
T ss_pred cEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEE------------------
Confidence 789999999778888775432 4589999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--ccccC
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEE 273 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~~~~~ 273 (447)
+. ..++|+|||.+..... .....
T Consensus 134 ------------------------------------------------------~~-~~~kl~dfg~~~~~~~~~~~~~~ 158 (282)
T cd07831 134 ------------------------------------------------------KD-DILKLADFGSCRGIYSKPPYTEY 158 (282)
T ss_pred ------------------------------------------------------cC-CCeEEEecccccccccCCCcCCC
Confidence 33 6799999999875432 22345
Q ss_pred CCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 274 IQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 274 ~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
.++..|+|||.+.. ..++.++|+|||||++|+|++|..||... +.......+.+..|..+..+..........
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 159 ISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT------NELDQIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred CCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC------CHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence 67899999998754 45689999999999999999999999765 345566777777777777653211111000
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.. ........... ......+..+.+||.+||+.||++|||++++++||||
T Consensus 233 -----~~-~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 233 -----NY-NFPSKKGTGLR-------KLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred -----cc-cCcccccccHH-------HHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00 00000000000 1122457899999999999999999999999999998
No 143
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.7e-38 Score=310.35 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=203.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.+|++.+.||+|++|+||+|.+..+++.||+|.+.... ...+.+..|+++++.+ .|++|+++++.+..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~-- 72 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL------DHPFLPTLYASFQT-- 72 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC------CCCCchhheeeeec--
Confidence 36999999999999999999999999999999876543 2345688899999999 78899999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+...++||||+ +++|.+++.......+++..+..++.|++.||+|||+. |++|+||||+||++.
T Consensus 73 --~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~------------ 137 (316)
T cd05574 73 --ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLH------------ 137 (316)
T ss_pred --CCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEc------------
Confidence 46899999999 88999988754445689999999999999999999996 999999999999993
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
.+..++|+|||++......
T Consensus 138 ------------------------------------------------------------~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 138 ------------------------------------------------------------ESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred ------------------------------------------------------------CCCCEEEeecchhhcccccc
Confidence 3567899999987543211
Q ss_pred -------------------------------cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCC
Q 013220 270 -------------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSG 318 (447)
Q Consensus 270 -------------------------------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~ 318 (447)
....+|+..|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 1123678899999999988899999999999999999999999975531
Q ss_pred CCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC--hhhHHHHHHHHhhcc
Q 013220 319 QGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS--ETDAREFAEFLVPLL 396 (447)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ll~~~L 396 (447)
... ..++.. ....++ ...+..+.+||.+||
T Consensus 238 ------~~~---~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~li~~~l 269 (316)
T cd05574 238 ------DET---FSNILK---------------------------------------KEVTFPGSPPVSSSARDLIRKLL 269 (316)
T ss_pred ------HHH---HHHHhc---------------------------------------CCccCCCccccCHHHHHHHHHHc
Confidence 111 111110 000011 124678999999999
Q ss_pred ccCCCCCCC----hHHHhcCccccccc
Q 013220 397 DFTPEKRPT----AQQCLQHPWLSLRN 419 (447)
Q Consensus 397 ~~dP~kRpt----a~elL~hp~f~~~~ 419 (447)
+.||++||| ++|+|+||||+...
T Consensus 270 ~~~p~~R~s~~~~~~~ll~~~~~~~~~ 296 (316)
T cd05574 270 VKDPSKRLGSKRGAAEIKQHPFFRGVN 296 (316)
T ss_pred cCCHhHCCCchhhHHHHHcCchhhcCC
Confidence 999999999 99999999998643
No 144
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.3e-37 Score=297.06 Aligned_cols=250 Identities=27% Similarity=0.411 Sum_probs=200.6
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.|++.+.||.|++|.||++.+..+++.||+|.+.... ...+.+.+|+++++.+ .|++|+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~--- 71 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL------KHPNIVAYRESWEGE--- 71 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC------CCCCeeeeeeeecCC---
Confidence 4899999999999999999999899999999876432 3345678899999998 788999998877532
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...++++|||+ +++|.+.+.......+++.++..++.|++.||++||++ ||+|+||||+||++.
T Consensus 72 ~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~-------------- 136 (257)
T cd08223 72 DGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLT-------------- 136 (257)
T ss_pred CCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEe--------------
Confidence 34789999999 78898888665445689999999999999999999996 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---c
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---Q 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---~ 269 (447)
....++|+|||.+..... .
T Consensus 137 ----------------------------------------------------------~~~~~~l~df~~~~~~~~~~~~ 158 (257)
T cd08223 137 ----------------------------------------------------------RTNIIKVGDLGIARVLENQCDM 158 (257)
T ss_pred ----------------------------------------------------------cCCcEEEecccceEEecccCCc
Confidence 356799999999865432 2
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.....+++.|+|||.+.+..++.++|+|||||++++|++|..||...+ .......+.. +..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~~--~~~----------- 219 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRIIE--GKL----------- 219 (257)
T ss_pred cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHh--cCC-----------
Confidence 233467899999999998889999999999999999999999996442 1111111100 000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
+..+...+..+.+||.+||+.||++|||+.++++||||
T Consensus 220 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 ----------------------------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ----------------------------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 01233456789999999999999999999999999997
No 145
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=9e-38 Score=305.01 Aligned_cols=283 Identities=28% Similarity=0.401 Sum_probs=214.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.++||.|++|+||+|.+..+++.||+|.+.... .....+.+|+++++.+ +|+||+++++++..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~--- 72 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM------QHGNIVRLQDVVHS--- 72 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc------cCCCEeeEEEEEec---
Confidence 57999999999999999999999899999999775432 2235677899999999 78999999999875
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...++||||+++++.+.+.......+++..+..++.||+.||+|||++ |++|+||+|+||++..
T Consensus 73 -~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~------------- 137 (294)
T PLN00009 73 -EKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDR------------- 137 (294)
T ss_pred -CCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEEC-------------
Confidence 3689999999987888877654444467888899999999999999997 9999999999999942
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
....++|+|||++......
T Consensus 138 ----------------------------------------------------------~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 138 ----------------------------------------------------------RTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ----------------------------------------------------------CCCEEEEcccccccccCCCccc
Confidence 2346899999998654322
Q ss_pred cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+ ....+..+....+.....+......
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDS------EIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhcccccc
Confidence 2334678899999998764 57899999999999999999999997653 4455555666666665554332222
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
...+....... . ..... ......+..+.+++.+||+.+|++||++.++++||||++..
T Consensus 234 ~~~~~~~~~~~--------~-~~~~~----~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 234 LPDYKSAFPKW--------P-PKDLA----TVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred chhhhhhcccC--------C-CCCHH----HhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 22111110000 0 00000 01223466789999999999999999999999999999754
No 146
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-37 Score=302.84 Aligned_cols=280 Identities=29% Similarity=0.477 Sum_probs=214.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||+|+||.||+|.+..+++.||+|.++... .....+.+|+++++.+ .|+||+++++.+..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~--- 71 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL------RHENIVNLKEAFRR--- 71 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc------CCCCeeehhheEEE---
Confidence 47999999999999999999999999999999876532 2345788999999999 78999999999875
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...+++|||+++++...+.... ..+++..+..++.|++.||+|||++ |++|+|++|+||++
T Consensus 72 -~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~--------------- 133 (288)
T cd07833 72 -KGRLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILV--------------- 133 (288)
T ss_pred -CCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEE---------------
Confidence 36899999999556555443332 4488999999999999999999997 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+....++|+|||.+......
T Consensus 134 ---------------------------------------------------------~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 134 ---------------------------------------------------------SESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ---------------------------------------------------------CCCCCEEEEeeecccccCCCccc
Confidence 34677999999998754432
Q ss_pred -cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||++.+. .++.++|+||||+++|+|++|..||... .....+..+....+.++........
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD------SDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 2345678899999999887 7889999999999999999999999755 2445566666667776664432222
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
....+. ....... ...... ...++..++..+.+||.+||..+|++|||++++++||||
T Consensus 231 ~~~~~~-------~~~~~~~-~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 231 SNPRFA-------GVAFPEP-SQPESL--ERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCcccc-------ccccCCC-CCcHHH--HHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 111110 0000000 000000 111334457889999999999999999999999999998
No 147
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.9e-37 Score=300.67 Aligned_cols=278 Identities=27% Similarity=0.425 Sum_probs=204.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+++++.+ .|+||+++++.+..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~--- 71 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL------KHPNLVNLIEVFRR--- 71 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC------CCCCEeeeeeEEee---
Confidence 47999999999999999999999899999999876432 2234678899999998 78899999998875
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
....++||||+ ++.+....... ..+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 72 -~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~-------------- 133 (286)
T cd07847 72 -KRKLHLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILI-------------- 133 (286)
T ss_pred -CCEEEEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEE--------------
Confidence 36899999999 44455444322 3589999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF- 270 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~- 270 (447)
+....++|+|||.+.......
T Consensus 134 ----------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 134 ----------------------------------------------------------TKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ----------------------------------------------------------cCCCcEEECccccceecCCCcc
Confidence 335679999999997554322
Q ss_pred --ccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 271 --AEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 271 --~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+ ....+..+...++...........
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS------DVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhhcc
Confidence 23457889999999876 457899999999999999999999997653 334444444544444332111100
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
. ..++... ........... .. .....+..+.+||.+||+.||++|||+.|++.||||
T Consensus 230 ~-~~~~~~~------~~~~~~~~~~~-~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 230 T-NQFFKGL------SIPEPETREPL-ES---KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred c-ccccccc------cCCCcccccCH-HH---HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 0000000 00000000000 00 011236788999999999999999999999999998
No 148
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.6e-38 Score=327.80 Aligned_cols=253 Identities=26% Similarity=0.334 Sum_probs=203.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCC-CeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRT-SSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~-~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
..|.+.+.||.|+||.||+|.+..+ +..||+|.+... ......+..|+++++.+ +|+||+++++.+...
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l------~Hpniv~~~~~~~~~--- 137 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC------DHFGIVKHFDDFKSD--- 137 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC------CCCCEeEEEEEEEEC---
Confidence 4599999999999999999988777 788999975443 33345677899999998 899999999998753
Q ss_pred cceEEEEEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...|+||||+ +++|.+.+... ....+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 138 -~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll------------- 202 (478)
T PTZ00267 138 -DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFL------------- 202 (478)
T ss_pred -CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEE-------------
Confidence 6899999999 88998877532 223588999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+....+||+|||++......
T Consensus 203 -----------------------------------------------------------~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 203 -----------------------------------------------------------MPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred -----------------------------------------------------------CCCCcEEEEeCcCceecCCcc
Confidence 33567999999999765432
Q ss_pred ----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 270 ----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+ ....+..+.. +..
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~------~~~~~~~~~~--~~~------- 288 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS------QREIMQQVLY--GKY------- 288 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--CCC-------
Confidence 233468999999999998889999999999999999999999996542 1111111110 000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
..++...+..+.+||.+||+.||++|||++++|.|||++..
T Consensus 289 --------------------------------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 289 --------------------------------DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred --------------------------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 01233456689999999999999999999999999998743
No 149
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.3e-38 Score=340.70 Aligned_cols=281 Identities=25% Similarity=0.410 Sum_probs=209.5
Q ss_pred CccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 30 g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
|+.+. ++|++.++||+|+||+||+|++..++..||+|++... ......+..|+.+++.+ .|+||++++++
T Consensus 8 ge~~l-~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L------~HPNIVrl~d~ 80 (1021)
T PTZ00266 8 GESRL-NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL------KHKNIVRYIDR 80 (1021)
T ss_pred Ccccc-CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc------CCCCcCeEEEE
Confidence 55554 6899999999999999999999999999999987643 33456788899999999 78999999998
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhh------CCcccccCCCCCeEe
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRE------LGIIHTDLKPENILL 177 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~------~gIiH~Dikp~Nill 177 (447)
|... ....+||||||+ +++|..++.... ...+++..++.|+.||+.||+|||+. .+||||||||+|||+
T Consensus 81 f~de--~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 81 FLNK--ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred EEec--CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 8754 346799999999 889998886422 24589999999999999999999983 049999999999999
Q ss_pred eecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeE
Q 013220 178 VSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKV 257 (447)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL 257 (447)
......... . .......+....++|
T Consensus 159 ~s~~~~lg~----------------------------------------------------i---~~~~~n~ng~~iVKL 183 (1021)
T PTZ00266 159 STGIRHIGK----------------------------------------------------I---TAQANNLNGRPIAKI 183 (1021)
T ss_pred ecCcccccc----------------------------------------------------c---cccccccCCCCceEE
Confidence 542100000 0 000000022456899
Q ss_pred eecCcccccccc--cccCCCCCCccChHHhhc--CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 258 VDFGNACRANKQ--FAEEIQTRQYRAPEVILR--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 258 ~Dfg~a~~~~~~--~~~~~gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
+|||++...... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+ ... .++.
T Consensus 184 sDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~------~~~---qli~ 254 (1021)
T PTZ00266 184 GDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN------NFS---QLIS 254 (1021)
T ss_pred ccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC------cHH---HHHH
Confidence 999999754322 234478999999999965 357899999999999999999999996442 111 1111
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
.+...+. . .....+..+.+||..||+.+|.+|||+.|+|.||
T Consensus 255 ~lk~~p~-------------------------------------l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~ 296 (1021)
T PTZ00266 255 ELKRGPD-------------------------------------L-PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQ 296 (1021)
T ss_pred HHhcCCC-------------------------------------C-CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccH
Confidence 1111110 0 0012356788999999999999999999999999
Q ss_pred ccccccCC
Q 013220 414 WLSLRNST 421 (447)
Q Consensus 414 ~f~~~~~~ 421 (447)
||+.....
T Consensus 297 ~ik~i~~p 304 (1021)
T PTZ00266 297 IIKNVGPP 304 (1021)
T ss_pred HHhhcCCC
Confidence 99866443
No 150
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.2e-38 Score=312.38 Aligned_cols=257 Identities=19% Similarity=0.320 Sum_probs=197.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.++||+|+||+||++++..+++.||+|++.... .....+.+|+.++..+ +|++|++++..+..
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~-- 72 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG------DNQWITTLHYAFQD-- 72 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC------CCCCEeeEEEEEec--
Confidence 36999999999999999999999999999999886532 2233567788888777 78999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+++||||+ +++|.+++.... ..+++..++.++.||+.||+|||+. ||+||||||+||++
T Consensus 73 --~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili------------- 135 (332)
T cd05623 73 --ENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILM------------- 135 (332)
T ss_pred --CCEEEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEE-------------
Confidence 36899999999 889998886532 3588999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+....++|+|||++......
T Consensus 136 -----------------------------------------------------------~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 136 -----------------------------------------------------------DMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred -----------------------------------------------------------CCCCCEEEeecchheecccCC
Confidence 34567999999998643221
Q ss_pred ---cccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 270 ---FAEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 ---~~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
....+||+.|+|||++.. ..++.++|+|||||++|+|++|+.||...+ ...... .+..... .
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~~~~---~i~~~~~-~ 226 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYG---KIMNHKE-R 226 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHHHHH---HHhCCCc-c
Confidence 123478999999999863 357899999999999999999999997542 111111 1111000 0
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCC--CCChHHHhcCccccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~k--Rpta~elL~hp~f~~~~ 419 (447)
+ .-+.....++.++.+||++||..++.. |++++++++||||...+
T Consensus 227 ~---------------------------------~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~ 273 (332)
T cd05623 227 F---------------------------------QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID 273 (332)
T ss_pred c---------------------------------cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence 0 000011234678899999999765544 68999999999998643
No 151
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-37 Score=305.37 Aligned_cols=261 Identities=29% Similarity=0.471 Sum_probs=208.0
Q ss_pred cccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 27 ~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
+..|+.. .+|++.++||+|+||.||+|++..++..|++|.+.... .....+.+|+++++.+ .|+||+++++
T Consensus 13 ~~~~~~~--~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~------~h~~v~~~~~ 84 (296)
T cd06654 13 VSVGDPK--KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN------KNPNIVNYLD 84 (296)
T ss_pred cccCCcc--cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC------CCCCEeeEEE
Confidence 4566666 68999999999999999999998899999999776432 3346788899999988 7899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
.+.. +.+.|+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. ||+|+||||+||+++
T Consensus 85 ~~~~----~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~------ 150 (296)
T cd06654 85 SYLV----GDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG------ 150 (296)
T ss_pred EEEe----CCEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEc------
Confidence 8875 36899999999 8899888753 2478899999999999999999996 999999999999993
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
....++|+|||.+.
T Consensus 151 ------------------------------------------------------------------~~~~~kl~dfg~~~ 164 (296)
T cd06654 151 ------------------------------------------------------------------MDGSVKLTDFGFCA 164 (296)
T ss_pred ------------------------------------------------------------------CCCCEEECccccch
Confidence 35679999999886
Q ss_pred ccccc---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 265 RANKQ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 265 ~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
..... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...... ....... ..+..
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~------~~~~~~~-~~~~~--- 234 (296)
T cd06654 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIA-TNGTP--- 234 (296)
T ss_pred hccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH------HhHHHHh-cCCCC---
Confidence 54322 23346889999999998888899999999999999999999999654210 0000000 00000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
....+..++..+.+||.+||..||++|||+.++++||||...+.
T Consensus 235 -----------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 235 -----------------------------------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred -----------------------------------CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 00122345567889999999999999999999999999987654
No 152
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-37 Score=295.31 Aligned_cols=249 Identities=24% Similarity=0.363 Sum_probs=203.0
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.|.+.+.||+|++|.||+|++..++..|++|.+... ......+.+|+++++.+ +|+||+++++.+...
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~--- 71 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL------DSSYIIRYYESFLDK--- 71 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc------CCCCeehheeeeccC---
Confidence 488999999999999999999999999999987643 34456788899999998 789999999988753
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...++||||+ +++|.+++.......++...+..++.|++.||.|||+. ||+|+||||+||++.
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~-------------- 135 (256)
T cd08529 72 -GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLD-------------- 135 (256)
T ss_pred -CEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEe--------------
Confidence 6899999999 88999988765445688999999999999999999996 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-- 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-- 270 (447)
....++|+|||.+.......
T Consensus 136 ----------------------------------------------------------~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 136 ----------------------------------------------------------AYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred ----------------------------------------------------------CCCCEEEcccccceeccCccch
Confidence 35679999999887544321
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||++.+..++.++|+|||||++++|++|..||...+ .......+.+ +..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~----------- 218 (256)
T cd08529 158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN------QGALILKIIR--GVF----------- 218 (256)
T ss_pred hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc--CCC-----------
Confidence 23367889999999998889999999999999999999999996542 1111111110 000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..++...+..+.++|.+||+.+|++||++.++++|||+
T Consensus 219 ----------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 219 ----------------------------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ----------------------------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 11223446689999999999999999999999999996
No 153
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.7e-37 Score=310.69 Aligned_cols=292 Identities=31% Similarity=0.487 Sum_probs=223.5
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.++|.+.+.||+|++|.||+|++..++..||+|++... ......+.+|+++++.+ .|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM------DHENVIGLLDVFTPAS 87 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc------cCCCHHHHHHHhhccc
Confidence 47899999999999999999999999999999987642 23345677899999998 7899999998876542
Q ss_pred C--CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 112 P--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 112 ~--~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
. .....++||||++++|.+++.. ..+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 88 ~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill------------ 151 (343)
T cd07851 88 SLEDFQDVYLVTHLMGADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAV------------ 151 (343)
T ss_pred cccccccEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEE------------
Confidence 1 2245999999998899888764 3489999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+....++|+|||.+......
T Consensus 152 ------------------------------------------------------------~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 152 ------------------------------------------------------------NEDCELKILDFGLARHTDDE 171 (343)
T ss_pred ------------------------------------------------------------CCCCCEEEcccccccccccc
Confidence 33567999999999776655
Q ss_pred cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....++..|+|||.+.+. .++.++|+|||||++|++++|+.||... .....+..+.+..+..++.+......
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (343)
T cd07851 172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS------DHIDQLKRIMNLVGTPDEELLQKISS 245 (343)
T ss_pred ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHhcCCCCHHHHhhccc
Confidence 5556788999999998764 5789999999999999999999999765 34556677777777777666433321
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET 425 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~~~ 425 (447)
.. . . .............. .. .....+..+.+||.+||+.||++|||+.++++||||........+.
T Consensus 246 ~~--~---~--~~~~~~~~~~~~~~-~~---~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~ 311 (343)
T cd07851 246 ES--A---R--NYIQSLPQMPKKDF-KE---VFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEP 311 (343)
T ss_pred hh--H---H--HHHHhccccCCCCH-HH---HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccc
Confidence 10 0 0 00000000000000 00 0112366899999999999999999999999999999876655433
No 154
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.5e-38 Score=299.11 Aligned_cols=249 Identities=26% Similarity=0.405 Sum_probs=200.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH------HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
..|.+.+.||+|++|.||+|.+..+++.||+|.+.... .....+.+|+++++.+ +|+||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL------QHERIVQYYGCLRD 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC------CCCCeeeeEEEEcc
Confidence 46999999999999999999999999999999875432 1234678899999998 78999999999875
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. ...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+. ||+|+||+|+||++
T Consensus 76 ~----~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv----------- 137 (263)
T cd06625 76 D----ETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILR----------- 137 (263)
T ss_pred C----CeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE-----------
Confidence 4 6999999999 88898887643 3488899999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+.+..++|+|||.+.....
T Consensus 138 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 138 -------------------------------------------------------------DSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred -------------------------------------------------------------cCCCCEEEeecccceeccc
Confidence 3356799999999864332
Q ss_pred cc------ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 269 QF------AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 269 ~~------~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
.. ....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+ . ...+......
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~---~~~~~~~~~~----- 222 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE------A---MAAIFKIATQ----- 222 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc------h---HHHHHHHhcc-----
Confidence 11 23457789999999998889999999999999999999999996432 1 1111111000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.....++...+..+.++|.+||..+|.+|||+.|+|+||||
T Consensus 223 --------------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 223 --------------------------------PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --------------------------------CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 00112344556788999999999999999999999999998
No 155
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.9e-39 Score=317.86 Aligned_cols=252 Identities=26% Similarity=0.426 Sum_probs=215.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|.+++.+|.|+||.+++++++..+..|++|.+.... ...+....|+.++.++ .|||||.+.+.|...
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~------~hP~iv~y~ds~~~~-- 75 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL------LHPNIVEYKDSFEED-- 75 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc------cCCCeeeeccchhcC--
Confidence 67999999999999999999999999999999766543 3345778899999998 899999999999974
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+..++|||+|| ||++.+.+...+...++++.+..|+.|++.|+.|||++ .|+|||||+.||+++.
T Consensus 76 -~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk------------ 141 (426)
T KOG0589|consen 76 -GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTK------------ 141 (426)
T ss_pred -CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccc------------
Confidence 45599999999 99999999887767799999999999999999999997 9999999999999943
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
...++|.|||+|+.....
T Consensus 142 ------------------------------------------------------------~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 142 ------------------------------------------------------------DKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred ------------------------------------------------------------cCceeecchhhhhhcCCchh
Confidence 556899999999876644
Q ss_pred -cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....+||+.|++||++.+.+|..|+|||||||++|+|++-+.+|...+. ...+..+.+..
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m------~~Li~ki~~~~------------- 222 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM------SELILKINRGL------------- 222 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch------HHHHHHHhhcc-------------
Confidence 3456899999999999999999999999999999999999999987642 22222222211
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
..+++...+.+++.+++.||..+|+.||+|.++|.+|.+.
T Consensus 223 ----------------------------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 223 ----------------------------YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ----------------------------CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 1235566788999999999999999999999999999776
No 156
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.9e-38 Score=312.49 Aligned_cols=256 Identities=19% Similarity=0.296 Sum_probs=198.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.++||+|+||+||++++..+++.||+|++.... .....+.+|..++..+ +|++|++++.++..
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~l~~~~~~-- 72 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG------DCQWITTLHYAFQD-- 72 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC------CCCCEeeEEEEEEc--
Confidence 47999999999999999999999999999999886532 2234577788888877 78999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
....|+||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||++
T Consensus 73 --~~~~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill------------- 135 (331)
T cd05624 73 --ENYLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLL------------- 135 (331)
T ss_pred --CCEEEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEE-------------
Confidence 47899999999 899998886532 3588999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+....++|+|||++.......
T Consensus 136 -----------------------------------------------------------~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 136 -----------------------------------------------------------DMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred -----------------------------------------------------------cCCCCEEEEeccceeeccCCC
Confidence 335679999999986544321
Q ss_pred ----ccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 271 ----AEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 271 ----~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
...+|++.|+|||++.+ ..++.++|+|||||++|+|++|+.||...+ .......+.......+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~-- 228 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHEERFQ-- 228 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC------HHHHHHHHHcCCCccc--
Confidence 22468999999999975 457889999999999999999999997542 1111111110000000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCC--CCChHHHhcCcccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLR 418 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~k--Rpta~elL~hp~f~~~ 418 (447)
.+.....+++++.+||.+||..++.+ |++++++++||||+..
T Consensus 229 -----------------------------------~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 229 -----------------------------------FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred -----------------------------------CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 00011224678999999999876554 4689999999999864
No 157
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.3e-37 Score=306.62 Aligned_cols=284 Identities=21% Similarity=0.336 Sum_probs=205.9
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+|++.++||+|+||.||+|.+..++..+|+|.++.+ ......+.+|+++++.+ +|+||+++++.+.. +
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~----~ 71 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC------NSPYIVGFYGAFYS----D 71 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC------CCCCCCeEEEEEee----C
Confidence 699999999999999999999999999999987643 23345688899999999 88999999999875 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||++.+++|+||||+||++.
T Consensus 72 ~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~--------------- 134 (308)
T cd06615 72 GEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN--------------- 134 (308)
T ss_pred CEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---------------
Confidence 6899999999 78998888654 45889999999999999999999744999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-ccc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAE 272 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-~~~ 272 (447)
.+..++|+|||.+...... ...
T Consensus 135 ---------------------------------------------------------~~~~~~l~dfg~~~~~~~~~~~~ 157 (308)
T cd06615 135 ---------------------------------------------------------SRGEIKLCDFGVSGQLIDSMANS 157 (308)
T ss_pred ---------------------------------------------------------cCCcEEEccCCCccccccccccc
Confidence 3566999999988654322 334
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc-
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD- 351 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 351 (447)
..++..|+|||.+.+..++.++|+|||||++|+|++|..||...+. ......++...............
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA----------KELEAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch----------hhHHHhhcCccccccccCCccccc
Confidence 5788999999999888889999999999999999999999965421 11112222211111000000000
Q ss_pred -hhcccchhhhhhhcccCchhHHhhh-hcCCCh-hhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 352 -YFDRHGDLKRIRRLKFWSLDRLLVD-KYRFSE-TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 352 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
........... ....+..... .+..+. ..+.++.+|+.+||..||++|||++|+++||||...
T Consensus 228 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 228 GHPPDSPRPMAI----FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CCCCCccchhhH----HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000000 0000001000 111111 246679999999999999999999999999999753
No 158
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.3e-37 Score=303.53 Aligned_cols=281 Identities=26% Similarity=0.403 Sum_probs=207.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.+|++.+.||+|+||.||+|.+..++..||+|++.... .....+.+|+++++.+ .|+||+++++++..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~ni~~~~~~~~~---- 74 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL------KHANIVLLHDIIHT---- 74 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc------CCCCEeEEEEEEec----
Confidence 67999999999999999999999999999999876543 2223567899999999 78999999998874
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+...|+||||+++++.+.+.... ..+.+..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 75 ~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~---------------- 136 (291)
T cd07870 75 KETLTFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLI---------------- 136 (291)
T ss_pred CCeEEEEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEE----------------
Confidence 46899999999777777664432 3477888999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||.+...... .
T Consensus 137 --------------------------------------------------------~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 137 --------------------------------------------------------SYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred --------------------------------------------------------cCCCcEEEeccccccccCCCCCCC
Confidence 33567999999988653322 2
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+ .....+..+...+|.++..........
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS-----DVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch-----hHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 234578899999998764 57889999999999999999999997553 234455555566665554432211111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+....... ......... ... . ..+..+.+|+.+||+.||.+|||++|++.||||
T Consensus 236 ~~~~~~~~~~-----~~~~~~~~~-~~~--~--~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 236 PNYKPEWFLP-----CKPQQLRVV-WKR--L--SRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ccccchhccc-----cCCcchhhh-ccc--c--CCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 1111000000 000000000 000 0 124578899999999999999999999999998
No 159
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.4e-38 Score=304.23 Aligned_cols=260 Identities=23% Similarity=0.408 Sum_probs=204.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.+.||+|+||.||+|.+..++..||+|.++.. ......+.+|+++++.+ .|+||+++++.+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~--- 71 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA------VSPYIVDFYGAFFIE--- 71 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc------CCCcHHhhhhheecC---
Confidence 3689999999999999999999989999999987643 23345788899999998 789999999988753
Q ss_pred cceEEEEEecc-cccHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSR-YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...++||||+ +++|..++.... ...+++..+..++.|++.||.|||++.||+|+||||+||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~-------------- 136 (286)
T cd06622 72 -GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV-------------- 136 (286)
T ss_pred -CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE--------------
Confidence 6899999999 788888775431 23589999999999999999999963499999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF- 270 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~- 270 (447)
+....++|+|||.+.......
T Consensus 137 ----------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 137 ----------------------------------------------------------NGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred ----------------------------------------------------------CCCCCEEEeecCCcccccCCcc
Confidence 335679999999986543332
Q ss_pred ccCCCCCCccChHHhhcC------CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 271 AEEIQTRQYRAPEVILRA------GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~------~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
....++..|+|||.+.+. .++.++|+|||||++|+|++|..||.... .......+..+....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~------ 226 (286)
T cd06622 159 KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET------YANIFAQLSAIVDGD------ 226 (286)
T ss_pred ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc------hhhHHHHHHHHhhcC------
Confidence 234678899999998643 35789999999999999999999996532 111111111111111
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
....+...+.++.+||.+||+.+|++||+++++++||||......
T Consensus 227 --------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 227 --------------------------------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred --------------------------------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 112334467789999999999999999999999999999877644
No 160
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=289.19 Aligned_cols=256 Identities=29% Similarity=0.406 Sum_probs=202.5
Q ss_pred cccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEec-hhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQK-SAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 32 ~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
.+|+.||+++++||+|||+-||+++...++..||+|.+. ...+..+...+|++..+++ +|+||++++++-...
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf------~s~~vl~l~dh~l~~ 90 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF------NSPNVLRLVDHQLRE 90 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh------CCcchHHHHHHHHHh
Confidence 356899999999999999999999999999999999654 3446677899999999999 789999999986654
Q ss_pred CC-CcceEEEEEecc-cccHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhhCC--cccccCCCCCeEeeecCCCC
Q 013220 111 GP-NGQHLCMVLEFL-GDSLLRLIKYSRY--KGLELNKVREICKYILTGLDYLHRELG--IIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 111 ~~-~~~~~~lvmE~~-~~~L~~~~~~~~~--~~l~~~~~~~i~~qil~aL~~lH~~~g--IiH~Dikp~Nill~~~~~~~ 184 (447)
.. ..+..|++++|+ .|+|.+.+....- ..+++.++.+|+.+++.||++||+. . +.||||||.||+++.
T Consensus 91 ~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~----- 164 (302)
T KOG2345|consen 91 EKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSD----- 164 (302)
T ss_pred hccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecC-----
Confidence 33 446799999999 8889988865432 3489999999999999999999996 7 999999999999943
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
...++|.|||.+.
T Consensus 165 -------------------------------------------------------------------~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 165 -------------------------------------------------------------------SGLPVLMDLGSAT 177 (302)
T ss_pred -------------------------------------------------------------------CCceEEEeccCcc
Confidence 5679999999986
Q ss_pred ccc------------cccccCCCCCCccChHHhhcC---CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHH
Q 013220 265 RAN------------KQFAEEIQTRQYRAPEVILRA---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLA 329 (447)
Q Consensus 265 ~~~------------~~~~~~~gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~ 329 (447)
... +.+.....|..|+|||.+.-. -.+.++|||||||++|.|+.|..||...-.++
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G--------- 248 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG--------- 248 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC---------
Confidence 543 223334579999999999743 45799999999999999999999996432111
Q ss_pred HHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCC--ChhhHHHHHHHHhhccccCCCCCCChH
Q 013220 330 LMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRF--SETDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
|...- ++...+..+ ....++.+.+||+.||+.||.+||++.
T Consensus 249 ------gSlaL-------------------------------Av~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~ 291 (302)
T KOG2345|consen 249 ------GSLAL-------------------------------AVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIP 291 (302)
T ss_pred ------CeEEE-------------------------------eeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHH
Confidence 00000 000001111 123578999999999999999999999
Q ss_pred HHhcC
Q 013220 408 QCLQH 412 (447)
Q Consensus 408 elL~h 412 (447)
+++.+
T Consensus 292 ~ll~~ 296 (302)
T KOG2345|consen 292 ELLSK 296 (302)
T ss_pred HHHHH
Confidence 99865
No 161
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.1e-37 Score=304.41 Aligned_cols=264 Identities=30% Similarity=0.473 Sum_probs=206.2
Q ss_pred CccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 30 g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
+++..++.|++.++||.|+||.||+|++..++..|++|++... ....+.+..|+++++.+ .|+||+++++.+.
T Consensus 6 ~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~ 79 (292)
T cd06644 6 RDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC------NHPYIVKLLGAFY 79 (292)
T ss_pred cccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC------CCCcEeeeEEEEE
Confidence 3456668899999999999999999999999999999987644 33456788899999998 8899999999887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.. ...++||||+ ++++...+.... ..+++..+..++.|++.||+|||+. |++|||+||+||++
T Consensus 80 ~~----~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili---------- 143 (292)
T cd06644 80 WD----GKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLL---------- 143 (292)
T ss_pred eC----CeEEEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEE----------
Confidence 53 5899999999 777776664332 4589999999999999999999996 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+....++|+|||.+....
T Consensus 144 --------------------------------------------------------------~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 144 --------------------------------------------------------------TLDGDIKLADFGVSAKNV 161 (292)
T ss_pred --------------------------------------------------------------cCCCCEEEccCccceecc
Confidence 335679999999886533
Q ss_pred cc---cccCCCCCCccChHHhh-----cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 268 KQ---FAEEIQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 268 ~~---~~~~~gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
.. .....++..|+|||.+. ...++.++|+|||||++|+|++|..||...+ ......+.....+
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~---------~~~~~~~~~~~~~ 232 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN---------PMRVLLKIAKSEP 232 (292)
T ss_pred ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc---------HHHHHHHHhcCCC
Confidence 22 22345788999999985 3456889999999999999999999996542 1111111111111
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
. ....+...+..+.+||.+||+.||++||+++++++||||...+
T Consensus 233 ~------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 233 P------------------------------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred c------------------------------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 0011233456788999999999999999999999999998765
Q ss_pred CCc
Q 013220 420 STR 422 (447)
Q Consensus 420 ~~~ 422 (447)
...
T Consensus 277 ~~~ 279 (292)
T cd06644 277 SNR 279 (292)
T ss_pred cch
Confidence 443
No 162
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.4e-37 Score=310.46 Aligned_cols=291 Identities=29% Similarity=0.449 Sum_probs=217.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.+|++.+.||+|+||+||+|++..++..||+|.+... ......+.+|+.+++.+ +|+||+++++++.....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL------DHENVIAIKDIMPPPHR 78 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc------CCCCccchHHheecccc
Confidence 6899999999999999999999999999999987642 22344667899999998 78999999998765321
Q ss_pred -CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 -NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 -~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.....++||||++++|.+.+... ..+++..+..++.|++.||.|||++ +++|+||||+||++
T Consensus 79 ~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~-------------- 141 (337)
T cd07858 79 EAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLL-------------- 141 (337)
T ss_pred cccCcEEEEEeCCCCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEE--------------
Confidence 22468999999988888887643 4589999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....++|+|||++......
T Consensus 142 ----------------------------------------------------------~~~~~~kL~Dfg~~~~~~~~~~ 163 (337)
T cd07858 142 ----------------------------------------------------------NANCDLKICDFGLARTTSEKGD 163 (337)
T ss_pred ----------------------------------------------------------cCCCCEEECcCccccccCCCcc
Confidence 33567999999998754332
Q ss_pred -cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+. +.......+.+..|..+........
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK------DYVHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC------ChHHHHHHHHHHhCCCChHHhhhcC
Confidence 233467889999999875 45889999999999999999999999765 2445566666777766644321000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 424 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~~ 424 (447)
.................... .....++..+.+||.+||+.||++|||++++|+||||...+.....
T Consensus 238 -------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~ 303 (337)
T cd07858 238 -------NEKARRYIRSLPYTPRQSFA----RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE 303 (337)
T ss_pred -------chhhhHHHHhcCcccccCHH----HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence 00000000000000000000 0112356788999999999999999999999999999887655443
No 163
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.6e-37 Score=307.55 Aligned_cols=296 Identities=30% Similarity=0.498 Sum_probs=227.2
Q ss_pred cCcccc-CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeec
Q 013220 29 VGDLFN-GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLI 104 (447)
Q Consensus 29 ~g~~~~-~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~ 104 (447)
+|+++. .++|++.+.||.|+||.||+|++..++..||+|.+... ......+.+|+++++.+ .|+||++++
T Consensus 2 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l------~hpniv~~~ 75 (328)
T cd07856 2 FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL------RHENIISLS 75 (328)
T ss_pred CcceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc------CCCCeeeEe
Confidence 466533 57899999999999999999999999999999976432 22345678899999999 789999999
Q ss_pred ccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 105 DHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 105 ~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
++|... +...+++|||++++|...+.. ..+++..+..++.|++.||+|||+. ||+|+||+|+||++
T Consensus 76 ~~~~~~---~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili------- 141 (328)
T cd07856 76 DIFISP---LEDIYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILI------- 141 (328)
T ss_pred eeEecC---CCcEEEEeehhccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeE-------
Confidence 988642 357899999998888877753 3478888899999999999999996 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+....++|+|||.+.
T Consensus 142 -----------------------------------------------------------------~~~~~~~l~dfg~~~ 156 (328)
T cd07856 142 -----------------------------------------------------------------NENCDLKICDFGLAR 156 (328)
T ss_pred -----------------------------------------------------------------CCCCCEEeCcccccc
Confidence 335679999999997
Q ss_pred ccccccccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 265 RANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 265 ~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
..........++..|+|||.+.+ ..++.++|+|||||++|+|++|..||... ........+.+.+|..++++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~------~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 157 IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK------DHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred ccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHH
Confidence 66555455678899999998866 56889999999999999999999999765 345566677788888888775
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~ 423 (447)
....... ................ . ......+..+.++|.+||+.+|++|||+++++.||||........
T Consensus 231 ~~~~~~~-------~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~ 299 (328)
T cd07856 231 NTICSEN-------TLRFVQSLPKREPVPF--S--EKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTD 299 (328)
T ss_pred Hhccchh-------hHHHHhhccccCCCcH--H--HHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcc
Confidence 4322111 0000000000000000 0 011234578999999999999999999999999999998777766
Q ss_pred ccc
Q 013220 424 ETK 426 (447)
Q Consensus 424 ~~~ 426 (447)
+..
T Consensus 300 ~~~ 302 (328)
T cd07856 300 EPV 302 (328)
T ss_pred ccC
Confidence 633
No 164
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.3e-37 Score=299.79 Aligned_cols=264 Identities=28% Similarity=0.398 Sum_probs=204.4
Q ss_pred ccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 28 ~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.+|+.. ++|.+.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.+. +|+||+++++++
T Consensus 16 ~~~~~~--~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-----~h~ni~~~~~~~ 88 (291)
T cd06639 16 SLGDPT--DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-----NHPNVVKFYGMF 88 (291)
T ss_pred cCCCCC--CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-----CCCCeEEEEEEE
Confidence 445543 6899999999999999999999999999999988765444567788999998885 689999999988
Q ss_pred cccCC-CcceEEEEEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCC
Q 013220 108 KHAGP-NGQHLCMVLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183 (447)
Q Consensus 108 ~~~~~-~~~~~~lvmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~ 183 (447)
..... .+...++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili------ 161 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILL------ 161 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEE------
Confidence 75421 235799999999 88898877532 224588999999999999999999996 99999999999999
Q ss_pred CCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcc
Q 013220 184 SKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA 263 (447)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a 263 (447)
+....++|+|||.+
T Consensus 162 ------------------------------------------------------------------~~~~~~kl~dfg~~ 175 (291)
T cd06639 162 ------------------------------------------------------------------TTEGGVKLVDFGVS 175 (291)
T ss_pred ------------------------------------------------------------------cCCCCEEEeecccc
Confidence 33567999999998
Q ss_pred cccccc---cccCCCCCCccChHHhhcC-----CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHh
Q 013220 264 CRANKQ---FAEEIQTRQYRAPEVILRA-----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 335 (447)
Q Consensus 264 ~~~~~~---~~~~~gt~~y~aPE~l~~~-----~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
...... .....++..|+|||.+... .++.++|+|||||++|+|++|+.||.... .... +.+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~------~~~~---~~~~~ 246 (291)
T cd06639 176 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH------PVKT---LFKIP 246 (291)
T ss_pred hhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc------HHHH---HHHHh
Confidence 654322 1234678899999998643 36789999999999999999999996542 1111 11111
Q ss_pred CCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 336 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...+.. ...+...+..+.+||.+||+.||++||++.++++||||
T Consensus 247 ~~~~~~------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 290 (291)
T cd06639 247 RNPPPT------------------------------------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290 (291)
T ss_pred cCCCCC------------------------------------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence 110000 00122334578899999999999999999999999999
Q ss_pred c
Q 013220 416 S 416 (447)
Q Consensus 416 ~ 416 (447)
+
T Consensus 291 ~ 291 (291)
T cd06639 291 K 291 (291)
T ss_pred C
Confidence 5
No 165
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.3e-37 Score=307.28 Aligned_cols=290 Identities=31% Similarity=0.477 Sum_probs=223.0
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC-C
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG-P 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~-~ 112 (447)
+|++.+.||.|++|.||+|++..++..||+|.+... ....+.+.+|+++++.+ +|+||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL------RHENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc------CCcchhhhhhhhcccCcc
Confidence 699999999999999999999888999999987643 23456788999999999 7899999999887653 2
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...+|++|||++++|.+.+.... .+++..+..++.|++.||++||+. ||+|+||||+||++
T Consensus 75 ~~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili--------------- 136 (330)
T cd07834 75 DFNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILV--------------- 136 (330)
T ss_pred cccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE---------------
Confidence 234789999999878888876433 589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+.++.++|+|||.+......
T Consensus 137 ---------------------------------------------------------~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 137 ---------------------------------------------------------NSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred ---------------------------------------------------------cCCCCEEEcccCceEeecccccc
Confidence 33577999999999765433
Q ss_pred ---cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 270 ---FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 270 ---~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
.....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+ .......++...|..+......
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD------YIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHhcCCCChhHhhh
Confidence 2234678899999999887 78999999999999999999999998763 5566677777777777554321
Q ss_pred CC--CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcc
Q 013220 346 GA--QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 346 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~ 423 (447)
.. ....+... .......... ......+..+.+||.+||+.+|++|||++++|.||||+.......
T Consensus 234 ~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~ 300 (330)
T cd07834 234 ITSEKARNYLKS---------LPKKPKKPLS----KLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPED 300 (330)
T ss_pred ccccchhhHHhh---------cccCCcchhH----HhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccccc
Confidence 00 00001000 0000000000 012235678999999999999999999999999999998765544
Q ss_pred ccc
Q 013220 424 ETK 426 (447)
Q Consensus 424 ~~~ 426 (447)
+..
T Consensus 301 ~~~ 303 (330)
T cd07834 301 EPV 303 (330)
T ss_pred CCC
Confidence 433
No 166
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.7e-37 Score=307.52 Aligned_cols=289 Identities=29% Similarity=0.470 Sum_probs=219.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||+|+||.||+|.+..++..||+|.+... ......+.+|+++++.+ .|+||+++++++.....
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM------KHENVIGLLDVFTPDLS 88 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc------CCCCccceeeeecCCcc
Confidence 6899999999999999999999999999999987542 22345678899999999 78999999998865321
Q ss_pred C--cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 113 N--GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 113 ~--~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
. ....++||||++++|..++.. ..+++..++.++.|++.||+|||+. ||+||||||+||++
T Consensus 89 ~~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill------------- 151 (343)
T cd07880 89 LDRFHDFYLVMPFMGTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAV------------- 151 (343)
T ss_pred ccccceEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE-------------
Confidence 1 135799999998888877753 3489999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+....++|+|||.+.......
T Consensus 152 -----------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~ 172 (343)
T cd07880 152 -----------------------------------------------------------NEDCELKILDFGLARQTDSEM 172 (343)
T ss_pred -----------------------------------------------------------cCCCCEEEeecccccccccCc
Confidence 335679999999997666555
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+++.|+|||.+.+. .++.++|+|||||++|++++|..||... ........++...+..+..+.......
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07880 173 TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH------DHLDQLMEIMKVTGTPSKEFVQKLQSE 246 (343)
T ss_pred cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHhhcch
Confidence 556778999999999763 5789999999999999999999999755 234455566666666665553332211
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~ 423 (447)
.. ............... ..+....+..+.++|.+||+.||++|||+.++++||||+.......
T Consensus 247 ~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~ 309 (343)
T cd07880 247 DA-------KNYVKKLPRFRKKDF----RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPED 309 (343)
T ss_pred hH-------HHHHHhccccCcchH----HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccc
Confidence 10 000000000000000 0112344667899999999999999999999999999998765433
No 167
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=302.65 Aligned_cols=268 Identities=27% Similarity=0.379 Sum_probs=221.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+.|...+.||+|+||.|-+|+-+.+++.||+|+++++.. ...+...|-++|+.. .||.+..+-=.|.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~------~HPFLt~LKYsFQ--- 238 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC------RHPFLTSLKYSFQ--- 238 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc------cCcHHHHhhhhhc---
Confidence 579999999999999999999999999999999887642 344566788999988 6666554443343
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+.+++|+||||. ||.|+..+.+. +.+++..++.+-..|+.||.|||++ +||.||+|.+|.|+
T Consensus 239 -t~drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlL------------- 301 (516)
T KOG0690|consen 239 -TQDRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLL------------- 301 (516)
T ss_pred -cCceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC-Ceeeeechhhhhee-------------
Confidence 668999999999 99998888754 4599999999999999999999997 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc---cc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR---AN 267 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~---~~ 267 (447)
+.++.+|+.|||+++. ..
T Consensus 302 -----------------------------------------------------------DkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 302 -----------------------------------------------------------DKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred -----------------------------------------------------------ccCCceEeeecccchhccccc
Confidence 7789999999999974 23
Q ss_pred cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 268 KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 268 ~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
..-..+|||+.|.|||++...-|+.++|.|.+||+||+|+.|++||...+ ++..
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d------h~kL-------------------- 376 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD------HEKL-------------------- 376 (516)
T ss_pred ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc------hhHH--------------------
Confidence 34456899999999999999999999999999999999999999998764 1111
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCcccccccCCc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~~~~ 422 (447)
++=++.....+|+..++++..||..+|..||.+|. .|+|+.+|+||...+=..
T Consensus 377 ----------------------FeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~ 434 (516)
T KOG0690|consen 377 ----------------------FELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA 434 (516)
T ss_pred ----------------------HHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence 22334455668889999999999999999999997 589999999999886555
Q ss_pred ccccccCCceeecc
Q 013220 423 DETKNKSNVEKVDV 436 (447)
Q Consensus 423 ~~~~~~~~~~~~~~ 436 (447)
...+...-.=|++|
T Consensus 435 ~~~Kki~PPfKPqV 448 (516)
T KOG0690|consen 435 TYRKKIEPPFKPQV 448 (516)
T ss_pred HHHhccCCCCCCCc
Confidence 55444444444443
No 168
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.4e-37 Score=294.83 Aligned_cols=250 Identities=30% Similarity=0.461 Sum_probs=202.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
++|++.+.||+|+||.||+|++..++..|++|.+..... .+.+.+|+++++.+ +|+||+++++.+... .
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~----~ 71 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC------DSPYIVKYYGSYFKN----T 71 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC------CCCcEeeeeeeeecC----C
Confidence 679999999999999999999988899999998876654 67899999999999 889999999988753 7
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..|++|||+ +++|.+.+... ...+++..+..++.|++.||+|||+. +|+|+|++|+||++
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~----------------- 132 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILL----------------- 132 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEE-----------------
Confidence 899999999 77888887542 24589999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc---c
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---A 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~---~ 271 (447)
+....++|+|||.+....... .
T Consensus 133 -------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (256)
T cd06612 133 -------------------------------------------------------NEEGQAKLADFGVSGQLTDTMAKRN 157 (256)
T ss_pred -------------------------------------------------------CCCCcEEEcccccchhcccCccccc
Confidence 335679999999987654332 2
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...++..|+|||++.+..++.++|||||||++|+|++|+.||...+.. ..+.......+
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~------------ 216 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM---------RAIFMIPNKPP------------ 216 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh---------hhhhhhccCCC------------
Confidence 235788999999999888999999999999999999999999754211 00100000000
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.....+...+..+.+||.+||+.||++|||++|+|.||||
T Consensus 217 ------------------------~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 217 ------------------------PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ------------------------CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 0001122345688999999999999999999999999997
No 169
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.5e-37 Score=297.96 Aligned_cols=277 Identities=29% Similarity=0.475 Sum_probs=207.6
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+|++.++||.|++|.||+|++..++..||+|.++... .....+.+|+++++.+ +|+||+++++.+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~~---- 70 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL------KHENIVRLHDVIHTE---- 70 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh------cCCCEeeeeeeEeeC----
Confidence 5899999999999999999999999999999876542 2245677899999999 789999999998854
Q ss_pred ceEEEEEecccccHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSR-YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+.+++.+++.... ...+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 71 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~---------------- 133 (284)
T cd07836 71 NKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLI---------------- 133 (284)
T ss_pred CcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEE----------------
Confidence 6789999999778888775432 23589999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||.+...... .
T Consensus 134 --------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~ 157 (284)
T cd07836 134 --------------------------------------------------------NKRGELKLADFGLARAFGIPVNTF 157 (284)
T ss_pred --------------------------------------------------------CCCCcEEEeecchhhhhcCCcccc
Confidence 33567999999998644322 2
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+ .......+.+..+.............
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN------NEDQLLKIFRIMGTPTESTWPGISQL 231 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCChhhHHHHhcC
Confidence 234568899999998764 46899999999999999999999997653 34445555554444433221111111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+...... ...... ..+....+..+.++|.+||+.||++|||++|+++||||
T Consensus 232 ~~~~~~~~~----------~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 232 PEYKPTFPR----------YPPQDL---QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred chhcccccC----------CChHHH---HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111000000 000000 00112346688999999999999999999999999998
No 170
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.6e-37 Score=299.22 Aligned_cols=257 Identities=28% Similarity=0.411 Sum_probs=200.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC-CCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG-PNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~-~~~ 114 (447)
++|++.+.||+|+||.||+|.+..++..+|+|++.........+..|+.+++.+. +|+||+++++++.... .++
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-----DHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-----cCCCeeeeeeeeeecccCCC
Confidence 7899999999999999999999999999999987765444466788999999885 6899999999875432 245
Q ss_pred ceEEEEEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...++||||+ +++|.+++... ....+++..+..++.|++.||.|||+. +|+|||+||+||++.
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~------------- 158 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLT------------- 158 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEEC-------------
Confidence 6899999999 88898876532 224578889999999999999999996 999999999999993
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
....++|+|||++......
T Consensus 159 -----------------------------------------------------------~~~~~kl~dfg~~~~~~~~~~ 179 (286)
T cd06638 159 -----------------------------------------------------------TEGGVKLVDFGVSAQLTSTRL 179 (286)
T ss_pred -----------------------------------------------------------CCCCEEEccCCceeecccCCC
Confidence 3456999999998654432
Q ss_pred -cccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 -FAEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.....|+..|+|||.+.. ..++.++|+|||||++|+|++|..||..... ...+.......+.
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~---------~~~~~~~~~~~~~--- 247 (286)
T cd06638 180 RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP---------MRALFKIPRNPPP--- 247 (286)
T ss_pred ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch---------hHHHhhccccCCC---
Confidence 223468899999999853 3478899999999999999999999965421 1111111000000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
....+...+..+.+||.+||+.||++|||+.|+|+|+||
T Consensus 248 ---------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 ---------------------------------TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ---------------------------------cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 000112234578899999999999999999999999997
No 171
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.9e-37 Score=293.24 Aligned_cols=249 Identities=22% Similarity=0.373 Sum_probs=201.4
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.++||+|+||.||++++..+++.||+|.+... ......+.+|+++++.+ +|+||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~---- 70 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM------KHPNIVQYQESFEE---- 70 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC------CCCCeeeeEeeecC----
Confidence 599999999999999999999999999999987643 23345788899999999 78999999998874
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..+.++||||+ +++|.+.+.......+++..+..++.|++.||+|||++ |++|+||+|+||++.
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~-------------- 135 (256)
T cd08218 71 NGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLT-------------- 135 (256)
T ss_pred CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEc--------------
Confidence 36899999999 88998888654434578899999999999999999996 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-- 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-- 270 (447)
....++|+|||.+.......
T Consensus 136 ----------------------------------------------------------~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 136 ----------------------------------------------------------KDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred ----------------------------------------------------------CCCCEEEeeccceeecCcchhh
Confidence 34569999999986543321
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+..++.++|+|||||++++|++|..||.... .......+ +.+..
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~--~~~~~----------- 218 (256)
T cd08218 158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKI--IRGSY----------- 218 (256)
T ss_pred hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHH--hcCCC-----------
Confidence 23457889999999988888999999999999999999999996432 11111111 00110
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...+...+..+.++|.+||+.+|++||++.++|+||||
T Consensus 219 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 219 ----------------------------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ----------------------------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 11233446689999999999999999999999999998
No 172
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2e-37 Score=300.49 Aligned_cols=276 Identities=29% Similarity=0.471 Sum_probs=209.4
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
|++.++||.|++|.||+|.+..++..||+|++.... .....+.+|+++++.+ +|++|+++++++.. +
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l------~~~~iv~~~~~~~~----~ 70 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL------NHPNIVRLLDVVHS----E 70 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc------CCCCccCHhheecc----C
Confidence 678899999999999999999899999999876543 2234677899999999 78999999999874 4
Q ss_pred ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
...+++|||++++|.+.+.......+++..+..++.|++.||+|||++ +++||||+|+||++
T Consensus 71 ~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~----------------- 132 (283)
T cd07835 71 NKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLI----------------- 132 (283)
T ss_pred CeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEE-----------------
Confidence 789999999987888887654434589999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
+....++|+|||.+...... ..
T Consensus 133 -------------------------------------------------------~~~~~~~l~df~~~~~~~~~~~~~~ 157 (283)
T cd07835 133 -------------------------------------------------------DREGALKLADFGLARAFGVPVRTYT 157 (283)
T ss_pred -------------------------------------------------------cCCCcEEEeecccccccCCCccccC
Confidence 33567999999998654322 22
Q ss_pred cCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 272 EEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
...++..|+|||.+.+. .++.++|+|||||++|+|++|..||... ++......+.+..+......+.......
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD------SEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 33568899999988764 5688999999999999999999999765 3444555566665555544322211111
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
++....... ..... .......+..+.++|.+||+.||++|||++|++.||||
T Consensus 232 ~~~~~~~~~------~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 232 DYKPTFPKW------ARQDL-------SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhhhhcccc------cccch-------hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 110000000 00000 01123345688999999999999999999999999998
No 173
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-37 Score=303.11 Aligned_cols=260 Identities=29% Similarity=0.494 Sum_probs=206.3
Q ss_pred ccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 28 ~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
..|+.. ++|++.++||+|+||.||+|++..++..||+|.+.... ...+.+.+|+.+++.+ +|+||+++++.
T Consensus 13 ~~~~~~--~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~ 84 (297)
T cd06656 13 SVGDPK--KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN------KNPNIVNYLDS 84 (297)
T ss_pred ccCChh--hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC------CCCCEeeEEEE
Confidence 345555 68999999999999999999999999999999876432 3345678899999988 88999999999
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
+.. +...++||||+ +++|.+++.. ..+++..+..++.|++.||.|||+. ||+||||||+||++
T Consensus 85 ~~~----~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili-------- 148 (297)
T cd06656 85 YLV----GDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILL-------- 148 (297)
T ss_pred Eec----CCEEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEE--------
Confidence 875 36899999999 8889888753 3478899999999999999999996 99999999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
+....++|+|||.+..
T Consensus 149 ----------------------------------------------------------------~~~~~~~l~Dfg~~~~ 164 (297)
T cd06656 149 ----------------------------------------------------------------GMDGSVKLTDFGFCAQ 164 (297)
T ss_pred ----------------------------------------------------------------CCCCCEEECcCccceE
Confidence 3356799999999865
Q ss_pred cccc---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 266 ANKQ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 266 ~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
.... .....+++.|+|||.+.+..++.++|+|||||++|++++|..||...+... ....+ ...+.
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~------~~~~~-~~~~~----- 232 (297)
T cd06656 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYLI-ATNGT----- 232 (297)
T ss_pred ccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch------heeee-ccCCC-----
Confidence 4322 223467889999999998888999999999999999999999996543110 00000 00000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.....+...+..+.+|+.+||+.||++|||++++|.||||.....
T Consensus 233 ---------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 233 ---------------------------------PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred ---------------------------------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 000122344567889999999999999999999999999986543
No 174
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.6e-37 Score=301.67 Aligned_cols=281 Identities=29% Similarity=0.458 Sum_probs=211.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||.|+||.||+|.+..+++.+++|.++.... ....+.+|+++++.+ .|+||+++++++...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~h~ni~~~~~~~~~~-- 76 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL------QHPNIVTVKEVVVGS-- 76 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc------CCCCEEEEEEEEEec--
Confidence 579999999999999999999998999999998764432 223467899999999 789999999987653
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+....|+||||++++|.+++.... ..+++..++.++.|++.||+|||++ ||+|+||||+||++
T Consensus 77 ~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili--------------- 139 (293)
T cd07843 77 NLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLL--------------- 139 (293)
T ss_pred CCCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEE---------------
Confidence 346899999999778888876533 3589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+..+.++|+|||.+......
T Consensus 140 ---------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~ 162 (293)
T cd07843 140 ---------------------------------------------------------NNRGILKICDFGLAREYGSPLKP 162 (293)
T ss_pred ---------------------------------------------------------CCCCcEEEeecCceeeccCCccc
Confidence 33567999999998765443
Q ss_pred cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...+ .......+....+............
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS------EIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchHHHHHhhc
Confidence 2234578899999998765 46899999999999999999999997653 4555566666666554432211110
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChh-hHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.. .... .......+..+ ...++.. +++.+.+||.+||+.||++|||++|+|.||||
T Consensus 237 ~~-~~~~----~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 237 LP-GAKK----KTFTKYPYNQL------RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cc-hhcc----cccccccchhh------hccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00 0000 00000000000 1112222 46788999999999999999999999999998
No 175
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.6e-37 Score=299.45 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=198.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.+.||+|+||.||+|.+..+++.||+|.++... .....+..|+.++.+.. +|+||+++++.+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~iv~~~~~~~~~--- 72 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSV-----DCPYTVTFYGALFRE--- 72 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHc-----CCCCeeeeeEEEecC---
Confidence 36999999999999999999999999999999876542 22334555666543332 899999999988743
Q ss_pred cceEEEEEecccccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...|++|||++++|.+++... ....+++..+..++.|++.||+|||++.+++||||||+||++
T Consensus 73 -~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~-------------- 137 (283)
T cd06617 73 -GDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI-------------- 137 (283)
T ss_pred -CcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE--------------
Confidence 579999999988888777542 224589999999999999999999985599999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....++|+|||.+......
T Consensus 138 ----------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 138 ----------------------------------------------------------NRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred ----------------------------------------------------------CCCCCEEEeecccccccccccc
Confidence 34567999999998654332
Q ss_pred cccCCCCCCccChHHhhc----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 270 FAEEIQTRQYRAPEVILR----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.... .....+..... ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~---~~~------ 225 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK-----TPFQQLKQVVE---EPS------ 225 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc-----cCHHHHHHHHh---cCC------
Confidence 223467889999999865 346889999999999999999999996431 11111111110 000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCC-hhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS-ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
..++ ...+.++.+||.+||..+|++|||++++++||||......
T Consensus 226 --------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 226 --------------------------------PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK 270 (283)
T ss_pred --------------------------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence 0011 1246689999999999999999999999999999976543
No 176
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-38 Score=317.69 Aligned_cols=253 Identities=26% Similarity=0.432 Sum_probs=220.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+.|.+.+.||+|.|+.|.+|++..++..||||++.+.. ...+.+.+|+++++.+ +|||||+++.+....
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l------~HPnIvkl~~v~~t~-- 127 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL------NHPNIVKLFSVIETE-- 127 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc------CCcceeeeeeeeeec--
Confidence 67999999999999999999999999999999988654 3445689999999999 899999999998854
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
..+|+||||+ ++.+++.+.... .+.+..++.++.|++.|++|||++ +|||||||.+|+++
T Consensus 128 --~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL-------------- 188 (596)
T KOG0586|consen 128 --ATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILL-------------- 188 (596)
T ss_pred --ceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhccc--------------
Confidence 7899999999 999998887543 377799999999999999999998 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--cc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQ 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~--~~ 269 (447)
+.++++||+|||++...+ ..
T Consensus 189 ----------------------------------------------------------~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 189 ----------------------------------------------------------DENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred ----------------------------------------------------------ccccceeeeccccceeeccccc
Confidence 567889999999997554 44
Q ss_pred cccCCCCCCccChHHhhcCCC-CccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILRAGY-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
...+||++.|.|||++.+..| ++.+|+||+|+++|.|+.|.+||.+..-++.
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L--------------------------- 263 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL--------------------------- 263 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc---------------------------
Confidence 566799999999999999887 5899999999999999999999987642211
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
.+..+...++++.-++.++.++|+++|..+|.+|++.+++..|.|.-...+.
T Consensus 264 ---------------------r~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 264 ---------------------RPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred ---------------------cchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 2334445556777778899999999999999999999999999999887655
No 177
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.7e-37 Score=294.43 Aligned_cols=255 Identities=30% Similarity=0.465 Sum_probs=201.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.+.||.|+||+||+|....++..+++|++.... ...+.+.+|+++++.+ .|++|+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~---- 70 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC------NHPNVVKYYTSFVV---- 70 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc------CCCCEEEEEEEEee----
Confidence 36999999999999999999988889999999876432 3456788999999988 78899999998874
Q ss_pred cceEEEEEecc-cccHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRY-KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+...++|||++ +++|.+.+..... ..+++..+..++.|++.||+|||+. ||+|+||+|+||++.
T Consensus 71 ~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~------------- 136 (267)
T cd06610 71 GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLG------------- 136 (267)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEc-------------
Confidence 46899999999 8889888865432 4588999999999999999999996 999999999999993
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
....++|+|||++......
T Consensus 137 -----------------------------------------------------------~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 137 -----------------------------------------------------------EDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred -----------------------------------------------------------CCCCEEEcccchHHHhccCcc
Confidence 3567999999998654322
Q ss_pred -----cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 -----FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 -----~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.....++..|+|||++... .++.++|+|||||++|+|++|..||...+.. ....+.....+..+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~- 227 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM---------KVLMLTLQNDPPSL- 227 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh---------hhHHHHhcCCCCCc-
Confidence 1223688899999999876 6889999999999999999999999654311 11111111111000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
. ........+..+.+|+.+||+.||++|||++++++||||
T Consensus 228 ---------------------------~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 228 ---------------------------E-----TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ---------------------------C-----CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0 000012446788999999999999999999999999998
No 178
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-36 Score=305.17 Aligned_cols=285 Identities=29% Similarity=0.467 Sum_probs=216.9
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.++|.+.+.||+|+||.||+|.+..+++.||+|.++.. ....+.+.+|+++++.+ +|+||+++++++....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l------~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM------KHENVIGLLDVFTPAR 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc------CCCcccceeeeeeecc
Confidence 37899999999999999999999999999999987643 22345677899999999 7899999999876432
Q ss_pred C--CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 112 P--NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 112 ~--~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
. .....|+++++++++|.+.+.. ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 90 ~~~~~~~~~lv~~~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll------------ 153 (345)
T cd07877 90 SLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAV------------ 153 (345)
T ss_pred cccccccEEEEehhcccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEE------------
Confidence 1 2245889999998899877653 3488999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+..+.++|+|||++......
T Consensus 154 ------------------------------------------------------------~~~~~~kl~dfg~~~~~~~~ 173 (345)
T cd07877 154 ------------------------------------------------------------NEDCELKILDFGLARHTDDE 173 (345)
T ss_pred ------------------------------------------------------------cCCCCEEEeccccccccccc
Confidence 33567999999999766555
Q ss_pred cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 270 FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||... ........+.+..+..+..+......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T cd07877 174 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT------DHIDQLKLILRLVGTPGAELLKKISS 247 (345)
T ss_pred ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHhhccc
Confidence 555678899999999876 46789999999999999999999999765 24455666667677766655322221
Q ss_pred cc--chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 349 SK--DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 349 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.. .+.. ............ .....+..+.+||.+||+.||++|||+.++|+||||+....
T Consensus 248 ~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 248 ESARNYIQ------SLTQMPKMNFAN-------VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HhHHHHHH------HhcccCCcchhh-------hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 10 0000 000000000000 00123567899999999999999999999999999997544
No 179
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-38 Score=311.54 Aligned_cols=256 Identities=26% Similarity=0.384 Sum_probs=196.2
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEec---hhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQK---SAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
++|..|++.++||.||.+.||++... ....||+|... .+....+.+.+|+++|..|. +|.+||++|++=.
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk-----g~~~IIqL~DYEv- 430 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLK-----GHDKIIQLYDYEV- 430 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-----CCceEEEEeeeec-
Confidence 34678999999999999999999754 34566666332 34566788999999999998 7889999999866
Q ss_pred cCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 110 AGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+..++||||||=..+|...+.... ..++.-.++.+..||+.|+.++|++ ||||.||||.|+|+.
T Consensus 431 ---~d~~lYmvmE~Gd~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlV----------- 494 (677)
T KOG0596|consen 431 ---TDGYLYMVMECGDIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLV----------- 494 (677)
T ss_pred ---cCceEEEEeecccccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEE-----------
Confidence 357999999987788888886543 2344348899999999999999997 999999999999983
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
.+.+||+|||+|..+...
T Consensus 495 --------------------------------------------------------------kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 495 --------------------------------------------------------------KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred --------------------------------------------------------------eeeEEeeeechhcccCcc
Confidence 478999999999755432
Q ss_pred -----cccCCCCCCccChHHhhcC-----------CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 270 -----FAEEIQTRQYRAPEVILRA-----------GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 270 -----~~~~~gt~~y~aPE~l~~~-----------~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
....+||+-|||||.+... ..+.++||||||||+|+|+.|+.||.... -..+.+..
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--------n~~aKl~a 584 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--------NQIAKLHA 584 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--------HHHHHHHh
Confidence 2234899999999998521 25689999999999999999999995321 12222222
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
+ -.+..++ + |. .++. ..++.++++.||.+||.+|||+.++|+||
T Consensus 585 I-~~P~~~I--------e-fp------------------------~~~~--~~~li~~mK~CL~rdPkkR~si~eLLqhp 628 (677)
T KOG0596|consen 585 I-TDPNHEI--------E-FP------------------------DIPE--NDELIDVMKCCLARDPKKRWSIPELLQHP 628 (677)
T ss_pred h-cCCCccc--------c-cc------------------------CCCC--chHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence 2 1111111 0 00 0111 22488999999999999999999999999
Q ss_pred cccc
Q 013220 414 WLSL 417 (447)
Q Consensus 414 ~f~~ 417 (447)
|++.
T Consensus 629 Fl~~ 632 (677)
T KOG0596|consen 629 FLQI 632 (677)
T ss_pred cccc
Confidence 9986
No 180
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=7.1e-37 Score=306.02 Aligned_cols=286 Identities=30% Similarity=0.486 Sum_probs=215.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|.+.+.||+|+||.||+|.+..+++.||+|.++.. ......+.+|+++++.+ .|+||+++++++.....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~ 88 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM------QHENVIGLLDVFTSAVS 88 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc------CCCCccchhheeccccc
Confidence 6899999999999999999999989999999987643 22334677899999998 78999999998875422
Q ss_pred --CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 113 --NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 113 --~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
.....++||||+..++..... ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 89 ~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll------------- 150 (342)
T cd07879 89 GDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAV------------- 150 (342)
T ss_pred CCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEE-------------
Confidence 224579999999777765542 3488999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.++|+|||++.......
T Consensus 151 -----------------------------------------------------------~~~~~~kL~dfg~~~~~~~~~ 171 (342)
T cd07879 151 -----------------------------------------------------------NEDCELKILDFGLARHADAEM 171 (342)
T ss_pred -----------------------------------------------------------CCCCCEEEeeCCCCcCCCCCC
Confidence 335679999999987665544
Q ss_pred ccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||... .....+..+....|..+..+.......
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T cd07879 172 TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK------DYLDQLTQILKVTGVPGPEFVQKLEDK 245 (342)
T ss_pred CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHHhccc
Confidence 55677899999999876 45789999999999999999999999765 245566666666666655543222111
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
. .................. .....+..+.+||.+||+.||++|||++++|.||||......
T Consensus 246 ~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 246 A-------AKSYIKSLPKYPRKDFST----LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred c-------hHHHHhhcCCcccchHHH----HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 0 000000000000000000 011235578899999999999999999999999999987643
No 181
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=6.7e-37 Score=304.73 Aligned_cols=288 Identities=28% Similarity=0.425 Sum_probs=217.0
Q ss_pred ceEEEEeecccCceEEEEEEeCCC--CeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRT--SSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~--~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+|++.+.||+|+||.||+|++..+ +..||+|.+... ....+.+.+|+++++.+. +|+||+++++.+....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~ 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-----GHKNITCLYDMDIVFP 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-----CCCChheeeeeeeecc
Confidence 589999999999999999999877 899999987642 223456788999999884 6899999998765432
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.....++++|++++++|.+.+... ..+++..++.++.||+.||+|||++ ||+||||||+||++
T Consensus 76 ~~~~~~~~~~e~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili-------------- 138 (332)
T cd07857 76 GNFNELYLYEELMEADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLV-------------- 138 (332)
T ss_pred ccCCcEEEEEecccCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEE--------------
Confidence 334578999999988888887643 4589999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....++|+|||.+......
T Consensus 139 ----------------------------------------------------------~~~~~~kl~Dfg~a~~~~~~~~ 160 (332)
T cd07857 139 ----------------------------------------------------------NADCELKICDFGLARGFSENPG 160 (332)
T ss_pred ----------------------------------------------------------cCCCCEEeCcCCCceecccccc
Confidence 33567999999998654321
Q ss_pred -----cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 -----FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 -----~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.....|+..|+|||.+.+ ..++.++|||||||++|+|++|..||... .....+..+...+|..+....
T Consensus 161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK------DYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC------CHHHHHHHHHHHhCCCCHHHH
Confidence 223468899999998876 46889999999999999999999999765 356677888888887776543
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
......... ............... ......+..+.+||.+||+.||++|||++|++.||||+..+..
T Consensus 235 ~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 235 SRIGSPKAQ-------NYIRSLPNIPKKPFE----SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDP 301 (332)
T ss_pred HhhhhhhHH-------HHHHhccccCCcchH----hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCc
Confidence 222111000 000000000000000 0112235688999999999999999999999999999877543
No 182
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.5e-37 Score=299.07 Aligned_cols=257 Identities=26% Similarity=0.438 Sum_probs=201.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+-|++.++||.|+||.||+|.+..++..+++|.+... ......+.+|+++++.+ .|+||+++++.+.. +
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~ii~~~~~~~~----~ 74 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC------DHPNIVKLLDAFYY----E 74 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC------CCCCeeeEEEEEee----C
Confidence 3478889999999999999999999999999987643 33456788899999998 88999999998875 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ ++++...+... ...+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 75 ~~~~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili---------------- 136 (282)
T cd06643 75 NNLWILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILF---------------- 136 (282)
T ss_pred CEEEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEE----------------
Confidence 6899999999 77777766432 24589999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||++...... .
T Consensus 137 --------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~ 160 (282)
T cd06643 137 --------------------------------------------------------TLDGDIKLADFGVSAKNTRTIQRR 160 (282)
T ss_pred --------------------------------------------------------ccCCCEEEcccccccccccccccc
Confidence 33567999999998644322 2
Q ss_pred ccCCCCCCccChHHhh-----cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 271 AEEIQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
....++..|+|||++. +..++.++|+|||||++|+|++|..||...+ . ...+.+.....+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~---~~~~~~~~~~~~~----- 226 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN------P---MRVLLKIAKSEPP----- 226 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC------H---HHHHHHHhhcCCC-----
Confidence 2346889999999984 3457789999999999999999999996542 1 1111111111000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
....+...+..+.+||.+||+.||++|||++++++||||+.....
T Consensus 227 -------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 271 (282)
T cd06643 227 -------------------------------TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNK 271 (282)
T ss_pred -------------------------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCCC
Confidence 001122345688999999999999999999999999999976543
No 183
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.7e-37 Score=300.78 Aligned_cols=254 Identities=28% Similarity=0.458 Sum_probs=201.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
++|++.++||.|+||+||+|++..++..+|+|++.... ...+.+..|+++++.+ +|+||+++++.+.. +
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~----~ 74 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC------KHPNIVGLYEAYFY----E 74 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC------CCCceeEEEEEEec----C
Confidence 67999999999999999999998899999999876443 3345788899999999 78999999999874 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ ||+|+||||+||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili---------------- 136 (280)
T cd06611 75 NKLWILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILL---------------- 136 (280)
T ss_pred CeEEEEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEE----------------
Confidence 6899999999 778888775432 4589999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+.+..++|+|||.+...... .
T Consensus 137 --------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 137 --------------------------------------------------------TLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred --------------------------------------------------------CCCCCEEEccCccchhhccccccc
Confidence 34567999999988644322 2
Q ss_pred ccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 271 AEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
....++..|+|||.+.. .+++.++|+|||||++|+|++|..||...+ ....+..+....+.
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~~~----- 226 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN---------PMRVLLKILKSEPP----- 226 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC---------HHHHHHHHhcCCCC-----
Confidence 23468899999999853 346789999999999999999999996542 11111111110000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
....+...+.++.+||.+||+.+|.+||++.++|+||||+..
T Consensus 227 -------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 227 -------------------------------TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred -------------------------------CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 001122345678899999999999999999999999999865
No 184
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-36 Score=296.42 Aligned_cols=267 Identities=26% Similarity=0.402 Sum_probs=204.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|...++||.|++|.||+|.+..+++.||+|.+.... .....+.+|+++++.+ +|+||+++++.+... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~--~ 72 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC------KSPYIVKYYGAFLDE--S 72 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC------CCCCeeeeeeEEEcc--C
Confidence 46999999999999999999999999999999876432 3456788999999998 889999999988654 3
Q ss_pred cceEEEEEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. |++|+||+|+||++.
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~------------ 139 (287)
T cd06621 73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLT------------ 139 (287)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEe------------
Confidence 45789999999 78888776432 223478889999999999999999996 999999999999993
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
....++|+|||++.......
T Consensus 140 ------------------------------------------------------------~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 140 ------------------------------------------------------------RKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred ------------------------------------------------------------cCCeEEEeeccccccccccc
Confidence 34569999999986543322
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... . ....+....+....+..
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~---~~~~~~~~~~~~~~~~~-------- 227 (287)
T cd06621 160 AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-P---LGPIELLSYIVNMPNPE-------- 227 (287)
T ss_pred cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-C---CChHHHHHHHhcCCchh--------
Confidence 2345788999999998888999999999999999999999999765321 0 01111111111100000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
+..........++.+.+||.+||+.+|.+|||+.|++.||||+...
T Consensus 228 ------------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 228 ------------------------LKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred ------------------------hccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 0000001112356889999999999999999999999999996543
No 185
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.8e-37 Score=298.24 Aligned_cols=253 Identities=29% Similarity=0.469 Sum_probs=204.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.+.||.|++|.||+|++..++..||+|.+.... .....+.+|+++++.+ .|+||+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~---- 70 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC------RSPYITKYYGSFLK---- 70 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc------CCCCeeeeeEEEEE----
Confidence 47999999999999999999999999999999876542 2345678899999999 78999999998874
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...++|+||+ +++|.+.+... .+++..+..++.|++.||.|||+. +++|+||+|+||++
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i--------------- 131 (274)
T cd06609 71 GSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILL--------------- 131 (274)
T ss_pred CCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEE---------------
Confidence 37899999999 78898887643 589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+....++|+|||.+......
T Consensus 132 ---------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 132 ---------------------------------------------------------SEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred ---------------------------------------------------------CCCCCEEEcccccceeecccccc
Confidence 34567999999998765433
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+. ......+....+
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~---------~~~~~~~~~~~~---------- 215 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP---------MRVLFLIPKNNP---------- 215 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch---------HHHHHHhhhcCC----------
Confidence 2344678899999999988899999999999999999999999965420 111111110000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChh-hHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
+..+.. .+..+.++|.+||..||++|||++++++||||+.....
T Consensus 216 ----------------------------~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 216 ----------------------------PSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred ----------------------------CCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 001111 45678999999999999999999999999999875533
No 186
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.3e-37 Score=294.71 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=196.2
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
+|++.+.||.|+||.||+|.+ .++..+|+|.++.. ......+.+|+++++.+ +|+||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL------KHVNIVQYLGTCLD 73 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc------CCCCEeeEeeEeec
Confidence 488899999999999999986 47889999976532 12235678899999999 78899999999875
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. ...+++|||+ +++|.+++... ..+++..+..++.|++.||+|||+. +|+|+||+|+||++
T Consensus 74 ~----~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~----------- 135 (265)
T cd06631 74 D----NTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVML----------- 135 (265)
T ss_pred C----CeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEE-----------
Confidence 3 7899999999 88998888643 3588999999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||.+.....
T Consensus 136 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 136 -------------------------------------------------------------MPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred -------------------------------------------------------------CCCCeEEeccchhhHhhhh
Confidence 3356799999998864321
Q ss_pred ---------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 269 ---------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 269 ---------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
......++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ .......+....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-- 226 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD------RLAAMFYIGAHRGL-- 226 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC------hHHHHHHhhhccCC--
Confidence 1123457889999999988888999999999999999999999996542 11111000000000
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.+..+...+.++.+||.+||+.+|++|||+.++|+||||
T Consensus 227 -------------------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 227 -------------------------------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred -------------------------------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011233456788999999999999999999999999997
No 187
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=299.00 Aligned_cols=242 Identities=13% Similarity=0.183 Sum_probs=193.0
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
..||+|+++.||+|.. +++.||+|.++.... ..+.+.+|+++++.+ .|+||+++++++.+...+...+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~~~g~~~~~~~~~~~~ 97 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI------DSNNILKIYGFIIDIVDDLPRL 97 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc------CCCCEEEEeeeEEecccCCCce
Confidence 3589999999999976 688999998765432 245677999999999 7889999999987632344579
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
++||||+ +++|.+.+... ..++......++.|++.||+|||+..+++||||||+||++
T Consensus 98 ~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill------------------- 156 (283)
T PHA02988 98 SLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV------------------- 156 (283)
T ss_pred EEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE-------------------
Confidence 9999999 88999988654 3588889999999999999999984499999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccCCCC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT 276 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~gt 276 (447)
+.++.+||+|||++...........++
T Consensus 157 -----------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~ 183 (283)
T PHA02988 157 -----------------------------------------------------TENYKLKIICHGLEKILSSPPFKNVNF 183 (283)
T ss_pred -----------------------------------------------------CCCCcEEEcccchHhhhccccccccCc
Confidence 445779999999997665555566789
Q ss_pred CCccChHHhhc--CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhc
Q 013220 277 RQYRAPEVILR--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 354 (447)
Q Consensus 277 ~~y~aPE~l~~--~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 354 (447)
..|+|||++.+ ..++.++|||||||++|+|++|..||...+ .......+... .
T Consensus 184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~------~~~~~~~i~~~--~----------------- 238 (283)
T PHA02988 184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT------TKEIYDLIINK--N----------------- 238 (283)
T ss_pred ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhc--C-----------------
Confidence 99999999976 578999999999999999999999997542 11111111100 0
Q ss_pred ccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 355 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.++.++...++.+.+||.+||+.||++|||++++++
T Consensus 239 ---------------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 239 ---------------------NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ---------------------CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 011123345678999999999999999999999985
No 188
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.1e-37 Score=296.14 Aligned_cols=278 Identities=28% Similarity=0.472 Sum_probs=205.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.++||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+++++.+ +|+||+++++++..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~--- 71 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL------RHENLVNLIEVFRR--- 71 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc------CCcchhhHHHhccc---
Confidence 36999999999999999999998889999999865432 2345677899999998 78999999999874
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+...++||||+ ++.+....... ..+++..+..++.|++.||+|||+. ||+|+|++|+||++
T Consensus 72 -~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~-------------- 133 (286)
T cd07846 72 -KKRLYLVFEFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILV-------------- 133 (286)
T ss_pred -CCeEEEEEecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEE--------------
Confidence 46899999999 55565554322 3488999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+.+..++|+|||++......
T Consensus 134 ----------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 134 ----------------------------------------------------------SQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred ----------------------------------------------------------CCCCcEEEEeeeeeeeccCCcc
Confidence 33567999999998654322
Q ss_pred -cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||++.+. .++.++|+|||||++|+|++|..||...+ .......+....+.+.......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-- 227 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS------DIDQLYHIIKCLGNLIPRHQEI-- 227 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc------hHHHHHHHHHHhCCCchhhHHH--
Confidence 2234678899999998764 46889999999999999999999986542 3344555555555544322111
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
+..................... ......+..+.+|+.+||+.+|++|||+.++++||||
T Consensus 228 -----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 228 -----FQKNPLFAGMRLPEVKEIEPLE----KRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred -----hccchHhhccccccccCcchHH----HhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 1000000000000000000000 0122456789999999999999999999999999998
No 189
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=314.11 Aligned_cols=243 Identities=27% Similarity=0.380 Sum_probs=201.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
.+++.++||+|.||.||+|++.. ...||+|.++......+.|.+|+++|+.| .|++||++++++... ..
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L------~H~~lV~l~gV~~~~----~p 275 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKL------RHEKLVKLYGVCTKQ----EP 275 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhC------cccCeEEEEEEEecC----Cc
Confidence 46688899999999999998753 45789999998777778899999999999 899999999999853 47
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
+||||||| .|+|.+++.......++..+...++.||++|++||.++ ++|||||-.+||||
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV------------------ 336 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILV------------------ 336 (468)
T ss_pred eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-Cccchhhhhhheee------------------
Confidence 99999999 89999999875556689999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-cCC
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-EEI 274 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~ 274 (447)
+.+..+|++|||+|+...+.-. ...
T Consensus 337 ------------------------------------------------------~~~~~vKIsDFGLAr~~~d~~Y~~~~ 362 (468)
T KOG0197|consen 337 ------------------------------------------------------DEDLVVKISDFGLARLIGDDEYTASE 362 (468)
T ss_pred ------------------------------------------------------ccCceEEEcccccccccCCCceeecC
Confidence 4467899999999985443321 112
Q ss_pred ---CCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 275 ---QTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 275 ---gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
-+..|.|||.+....|+.|+|+|||||+|++|++ |+.||...+ ..+.+..+.+
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms------n~ev~~~le~----------------- 419 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS------NEEVLELLER----------------- 419 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC------HHHHHHHHhc-----------------
Confidence 2568999999999999999999999999999997 999998764 2222222211
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHh
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL 410 (447)
..+.+-|..+|+++-+++..||+.+|++|||++.+.
T Consensus 420 ------------------------GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 420 ------------------------GYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ------------------------cCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 112235667899999999999999999999998664
No 190
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.5e-37 Score=293.70 Aligned_cols=253 Identities=27% Similarity=0.479 Sum_probs=201.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-------HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
+|+..+.||+|++|.||+|.+..+++.||+|++.... ...+.+.+|+++++.+ .|+||+++++.+..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~ 74 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL------NHPHIIRMLGATCE 74 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc------CCCceehhhceecc
Confidence 4888899999999999999999999999999876432 2356788999999999 78999999999875
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. ...++||||+ +++|.+++... ..+++..+..++.|++.||.|||++ |++|+||+|+||++..
T Consensus 75 ~----~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~--------- 138 (268)
T cd06630 75 D----SHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDS--------- 138 (268)
T ss_pred C----CeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcC---------
Confidence 3 6899999999 88998888643 4588999999999999999999996 9999999999999932
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
....++|+|||.+.....
T Consensus 139 --------------------------------------------------------------~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 139 --------------------------------------------------------------TGQRLRIADFGAAARLAA 156 (268)
T ss_pred --------------------------------------------------------------CCCEEEEccccccccccc
Confidence 123589999999865443
Q ss_pred c-------cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 269 Q-------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 269 ~-------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
. .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.. .....+.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~----- 225 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS------NHLALIFKIAS----- 225 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc------chHHHHHHHhc-----
Confidence 2 12235788999999998888899999999999999999999999644211 11111111100
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
.......+...+..+.+++.+||+.+|++|||+.++++||||+
T Consensus 226 --------------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 226 --------------------------------ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred --------------------------------cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 0001123445567899999999999999999999999999985
No 191
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.6e-37 Score=299.26 Aligned_cols=253 Identities=30% Similarity=0.514 Sum_probs=203.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.+|++.++||.|++|+||+|.+..+++.|++|.+.... ...+.+.+|+++++.+ .|+||+++++.+.. +
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~----~ 88 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL------KNPNIVNFLDSFLV----G 88 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc------CCCceeeeeeeEec----C
Confidence 57999999999999999999999999999999765432 2345778899999998 78999999999874 4
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|...+.. ..+++..+..++.|++.||+|||+. |++|+||||+||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili---------------- 148 (296)
T cd06655 89 DELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLL---------------- 148 (296)
T ss_pred ceEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEE----------------
Confidence 6899999999 8888887753 3488999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||++...... .
T Consensus 149 --------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~ 172 (296)
T cd06655 149 --------------------------------------------------------GMDGSVKLTDFGFCAQITPEQSKR 172 (296)
T ss_pred --------------------------------------------------------CCCCCEEEccCccchhcccccccC
Confidence 33567999999988654322 2
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ ....+..+.. .+. +
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~------~~~~~~~~~~-~~~-~----------- 233 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN------PLRALYLIAT-NGT-P----------- 233 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh-cCC-c-----------
Confidence 23467889999999988888999999999999999999999997543 1111111100 000 0
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
....+..++..+.+||.+||..||++|||+.+++.||||....
T Consensus 234 --------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 234 --------------------------ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred --------------------------ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 0012234466888999999999999999999999999998654
No 192
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1e-36 Score=304.86 Aligned_cols=284 Identities=26% Similarity=0.454 Sum_probs=204.0
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+++|.+.+.||.|+||.||+|++..++..||+|.+.... ...+.+.+|+++++.+ .|+||+++++++......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l------~h~~i~~~~~~~~~~~~~ 77 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL------DHDNIVKVYEVLGPSGSD 77 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc------CCCcchhhHhhhcccccc
Confidence 479999999999999999999999999999999765432 3345688899999999 789999999887654321
Q ss_pred ----------cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCC
Q 013220 114 ----------GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183 (447)
Q Consensus 114 ----------~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~ 183 (447)
....++||||++++|.+.+.. ..+++..++.++.|++.||.|||+. ||+||||||+||++..
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~---- 149 (342)
T cd07854 78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINT---- 149 (342)
T ss_pred cccccccccccceEEEEeecccccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcC----
Confidence 136899999998788877753 3488999999999999999999996 9999999999999942
Q ss_pred CCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcc
Q 013220 184 SKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA 263 (447)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a 263 (447)
....++|+|||.+
T Consensus 150 -------------------------------------------------------------------~~~~~kl~dfg~~ 162 (342)
T cd07854 150 -------------------------------------------------------------------EDLVLKIGDFGLA 162 (342)
T ss_pred -------------------------------------------------------------------CCceEEECCcccc
Confidence 2346899999998
Q ss_pred cccccc------cccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhC
Q 013220 264 CRANKQ------FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG 336 (447)
Q Consensus 264 ~~~~~~------~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g 336 (447)
...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.... .......+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~ 236 (342)
T cd07854 163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH------ELEQMQLILESVP 236 (342)
T ss_pred eecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcC
Confidence 654321 122357889999998765 457889999999999999999999997552 2222222222221
Q ss_pred CCCHHhhhCCCCccchhcccchhhh-hhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 337 KMPRKIAIGGAQSKDYFDRHGDLKR-IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
........ .+......... ........... .....+.++.+||.+||+.||++|||+.++|+||||
T Consensus 237 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~ 303 (342)
T cd07854 237 VVREEDRN------ELLNVIPSFVRNDGGEPRRPLRD-------LLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303 (342)
T ss_pred CCChHHhh------hhhhhhhhhhhhcccccCCCHHH-------HccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcc
Confidence 11111000 00000000000 00000000000 112345688899999999999999999999999999
Q ss_pred ccc
Q 013220 416 SLR 418 (447)
Q Consensus 416 ~~~ 418 (447)
+..
T Consensus 304 ~~~ 306 (342)
T cd07854 304 SCY 306 (342)
T ss_pred ccc
Confidence 854
No 193
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=8e-37 Score=292.30 Aligned_cols=249 Identities=27% Similarity=0.409 Sum_probs=203.7
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+|++.+.||.|+||.||+|++..++..||+|++.... ...+.+.+|+++++.+ +|+||+++++.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~--- 71 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL------NHPFLVNLWYSFQD--- 71 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC------CCCChHHHHHhhcC---
Confidence 5899999999999999999999899999999886543 3456788899999998 78999999998874
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+...++||||+ +++|...+... ..+++..+..++.|++.||.|||+. |++|+||+|+||++
T Consensus 72 -~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~-------------- 133 (258)
T cd05578 72 -EENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILL-------------- 133 (258)
T ss_pred -CCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEE--------------
Confidence 47899999999 88998888654 4589999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....++|+|||.+......
T Consensus 134 ----------------------------------------------------------~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 134 ----------------------------------------------------------DEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred ----------------------------------------------------------cCCCCEEEeecccccccCCCcc
Confidence 34567999999998654322
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.. ....+.+....
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~------------ 216 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-------IRDQIRAKQET------------ 216 (258)
T ss_pred ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-------HHHHHHHHhcc------------
Confidence 23346788999999998888899999999999999999999999765311 11111111100
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh--HHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA--QQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta--~elL~hp~f 415 (447)
.....+...+..+.++|.+||+.||.+||++ +|+++||||
T Consensus 217 --------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 --------------------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred --------------------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 1112344456789999999999999999999 999999998
No 194
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.4e-37 Score=293.54 Aligned_cols=250 Identities=26% Similarity=0.417 Sum_probs=197.0
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
.|+..+.||+|+||.||+|.+..++..|++|.+... ......+.+|+++++.+ +|+||+++++.+...
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~ 76 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL------QHERIVQYYGCLRDR 76 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc------CCCCeeeEEEEEEcC
Confidence 589999999999999999999999999999976532 12345678899999999 789999999987653
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
.+..++++|||+ +++|.+.+... ..+++.....++.|++.||+|||+. +|+|+||+|+||++
T Consensus 77 --~~~~~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~------------ 139 (266)
T cd06651 77 --AEKTLTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILR------------ 139 (266)
T ss_pred --CCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEE------------
Confidence 345789999999 78898887643 3488899999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+....++|+|||++......
T Consensus 140 ------------------------------------------------------------~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 140 ------------------------------------------------------------DSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred ------------------------------------------------------------CCCCCEEEccCCCccccccc
Confidence 33567999999998643221
Q ss_pred ------cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 ------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 ------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ ....+.......
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~---------~~~~~~~~~~~~----- 225 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE---------AMAAIFKIATQP----- 225 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc---------hHHHHHHHhcCC-----
Confidence 122357889999999988888999999999999999999999996432 111111111000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
..+.++...++.+.+|| +||..+|++|||++|+++||||.
T Consensus 226 --------------------------------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 226 --------------------------------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred --------------------------------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 01123344466778888 67778999999999999999996
No 195
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.6e-36 Score=291.59 Aligned_cols=251 Identities=25% Similarity=0.402 Sum_probs=199.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
.+|++.+.||+|+||.||+|++..++..||+|.+... ....+.+.+|+++++.+ .|+||+++++++..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~ 75 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL------LHERIVQYYGCLRD 75 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc------CCCCeeeEEeEecc
Confidence 3699999999999999999999999999999976532 12345778899999999 78999999998765
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. ....++++|||+ +++|.+.+... ..+++..+..++.|++.||+|||++ +|+|+||||+||++
T Consensus 76 ~--~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~----------- 139 (265)
T cd06652 76 P--MERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILR----------- 139 (265)
T ss_pred C--CCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEe-----------
Confidence 3 235789999999 78898887643 3478889999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||.+.....
T Consensus 140 -------------------------------------------------------------~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 140 -------------------------------------------------------------DSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred -------------------------------------------------------------cCCCCEEECcCcccccccc
Confidence 3356799999998864432
Q ss_pred ------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 269 ------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 269 ------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
......++..|+|||.+.+..++.++|+|||||++|+|++|+.||...+ ....+.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~---------~~~~~~~~~~~~---- 225 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE---------AMAAIFKIATQP---- 225 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc---------hHHHHHHHhcCC----
Confidence 1223457889999999988888999999999999999999999996431 111111111110
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
..+..+...+..+.++|++|| .+|++|||++++++|||+.
T Consensus 226 ---------------------------------~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 226 ---------------------------------TNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFVH 265 (265)
T ss_pred ---------------------------------CCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCcccC
Confidence 011234455678889999999 4999999999999999984
No 196
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.1e-37 Score=300.26 Aligned_cols=282 Identities=29% Similarity=0.412 Sum_probs=208.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.++||.|+||.||+|.+..+++.||+|.+.... .....+.+|+++++.+ +|+||+++++.+.....
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~ 81 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL------KHPNVVPLIDMAVERPD 81 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc------CCCCccchhhheecccc
Confidence 68999999999999999999999999999999765432 1223567899999999 78999999998765432
Q ss_pred ----CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 113 ----NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 113 ----~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
....+++||||+++++...+... ...+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 82 ~~~~~~~~~~lv~~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~----------- 148 (311)
T cd07866 82 KSKRKRGSVYMVTPYMDHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILI----------- 148 (311)
T ss_pred cccccCceEEEEEecCCcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE-----------
Confidence 23578999999987887766542 24589999999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||++.....
T Consensus 149 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 167 (311)
T cd07866 149 -------------------------------------------------------------DNQGILKIADFGLARPYDG 167 (311)
T ss_pred -------------------------------------------------------------CCCCCEEECcCccchhccC
Confidence 4456799999998864332
Q ss_pred c--------------cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 269 Q--------------FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 269 ~--------------~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
. .+...+++.|+|||.+.+. .++.++|+|||||++|+|++|+.||.+. +.......+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~------~~~~~~~~~~~ 241 (311)
T cd07866 168 PPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGK------SDIDQLHLIFK 241 (311)
T ss_pred CCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHH
Confidence 1 1122457889999998764 5789999999999999999999999765 35556666666
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
..+..++.....+........ . .........+... .......+.+||.+||+.||++|||+.+++.||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~ 309 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEG-V--------HSFTNYPRTLEER---FGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP 309 (311)
T ss_pred HhCCCChhhchhhhhcccccc-c--------ccCCCCCccHHHH---cccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence 666555432111110000000 0 0000000000000 012236788999999999999999999999999
Q ss_pred cc
Q 013220 414 WL 415 (447)
Q Consensus 414 ~f 415 (447)
||
T Consensus 310 ~f 311 (311)
T cd07866 310 YF 311 (311)
T ss_pred CC
Confidence 98
No 197
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.6e-37 Score=294.65 Aligned_cols=247 Identities=28% Similarity=0.485 Sum_probs=198.4
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----------HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
+|.+.+.||.|++|.||+|.+..++..||+|.+.... ...+.+.+|+++++.+ .|++|++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~ 74 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL------QHENIVQYLGS 74 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc------CCCCeeeEEEE
Confidence 5788899999999999999998889999999765321 1235678899999999 78999999998
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
+... ...+++|||+ +++|.+.+... ..+++..+..++.|++.||+|||++ |++||||+|+||++
T Consensus 75 ~~~~----~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~-------- 139 (267)
T cd06628 75 SLDA----DHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILV-------- 139 (267)
T ss_pred EEeC----CccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEE--------
Confidence 8753 6899999999 77898888643 4588899999999999999999996 99999999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
+....++|+|||.+..
T Consensus 140 ----------------------------------------------------------------~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 140 ----------------------------------------------------------------DNKGGIKISDFGISKK 155 (267)
T ss_pred ----------------------------------------------------------------cCCCCEEecccCCCcc
Confidence 3356799999998865
Q ss_pred cccc---------cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhC
Q 013220 266 ANKQ---------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG 336 (447)
Q Consensus 266 ~~~~---------~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g 336 (447)
.... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ . ...+.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~---~~~~~~~~~ 226 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT------Q---LQAIFKIGE 226 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc------H---HHHHHHHhc
Confidence 4311 112357889999999988888999999999999999999999996542 1 111111110
Q ss_pred CCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 337 KMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
. ..+..+...+..+.++|.+||+.||.+||++.|+++||||
T Consensus 227 ~--------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 227 N--------------------------------------ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred c--------------------------------------CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 0 0111334456788999999999999999999999999997
No 198
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.1e-37 Score=295.84 Aligned_cols=256 Identities=25% Similarity=0.440 Sum_probs=204.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|++.+.||.|++|.||+|.+..+++.||+|.+... ......+.+|+++++.+ .|+||+++++.+...
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~--- 71 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC------NSPYIVGFYGAFYNN--- 71 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC------CCCchhhhheeeecC---
Confidence 3688899999999999999999999999999987654 23456788899999998 789999999988754
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-hCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR-ELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...+++|||+ +++|.+++.... ..+++..+..++.|++.||+|||+ . |++|+||||+||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~-------------- 134 (265)
T cd06605 72 -GDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILV-------------- 134 (265)
T ss_pred -CEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEE--------------
Confidence 6899999999 689988886543 468899999999999999999999 7 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF- 270 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~- 270 (447)
+....++|+|||.+.......
T Consensus 135 ----------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 135 ----------------------------------------------------------NSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred ----------------------------------------------------------CCCCCEEEeecccchhhHHHHh
Confidence 335679999999986543221
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.. .......+.......
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~------------ 220 (265)
T cd06605 157 KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP----PDGIFELLQYIVNEP------------ 220 (265)
T ss_pred hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc----cccHHHHHHHHhcCC------------
Confidence 1256788999999999888999999999999999999999999755311 011111111111110
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChh-hHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
.+..+.. .+..+.+||.+||..||++|||+.+++.||||+.
T Consensus 221 --------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 221 --------------------------PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred --------------------------CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 0112222 4668999999999999999999999999999974
No 199
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.9e-37 Score=295.27 Aligned_cols=252 Identities=27% Similarity=0.375 Sum_probs=196.4
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.++|++.++||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ .|+||+++++.+..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~------~h~~ii~~~~~~~~---- 77 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC------KHCNIVAYFGSYLS---- 77 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc------CCCCeeeeeEEEEe----
Confidence 367999999999999999999999999999999876432 2344677899999988 88999999998874
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+. ||+|||++|+||++
T Consensus 78 ~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill--------------- 139 (267)
T cd06646 78 REKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILL--------------- 139 (267)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEE---------------
Confidence 36899999999 77888877543 3588999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+....++|+|||.+......
T Consensus 140 ---------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06646 140 ---------------------------------------------------------TDNGDVKLADFGVAAKITATIAK 162 (267)
T ss_pred ---------------------------------------------------------CCCCCEEECcCccceeecccccc
Confidence 33567999999998755322
Q ss_pred cccCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCC
Q 013220 270 FAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 346 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (447)
.....++..|+|||.+. ...++.++|+|||||++|+|++|..||...+... ....+.. ....+
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~------~~~~~~~-~~~~~------- 228 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR------ALFLMSK-SNFQP------- 228 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh------hheeeec-CCCCC-------
Confidence 22346788999999985 3447889999999999999999999986442110 0000000 00000
Q ss_pred CCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcc
Q 013220 347 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 414 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~ 414 (447)
.........+..+.+||.+||+.||++|||++++|+|+|
T Consensus 229 -----------------------------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 229 -----------------------------PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -----------------------------CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 000011234568899999999999999999999999998
No 200
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-37 Score=296.76 Aligned_cols=252 Identities=27% Similarity=0.391 Sum_probs=196.8
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.++|.+.++||+|+||.||+|++..+++.||+|+++... .....+.+|+.+++.+ .|+||+++++.+..
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l------~h~~ii~~~~~~~~---- 77 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC------KHSNIVAYFGSYLR---- 77 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC------CCCCeeeEEEEEEe----
Confidence 367999999999999999999999999999999876543 2234577899999988 78999999998875
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...++||||+ +++|.+++... ..+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili--------------- 139 (267)
T cd06645 78 RDKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILL--------------- 139 (267)
T ss_pred CCEEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE---------------
Confidence 36899999999 77898887643 3589999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
+....++|+|||.+......
T Consensus 140 ---------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06645 140 ---------------------------------------------------------TDNGHVKLADFGVSAQITATIAK 162 (267)
T ss_pred ---------------------------------------------------------CCCCCEEECcceeeeEccCcccc
Confidence 33567999999998654322
Q ss_pred cccCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCC
Q 013220 270 FAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 346 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (447)
.....|+..|+|||.+. ...++.++|+|||||++|+|++|..||..... ......... ....+..
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~------~~~~~~~~~-~~~~~~~----- 230 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP------MRALFLMTK-SNFQPPK----- 230 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc------hhhHHhhhc-cCCCCCc-----
Confidence 23346899999999985 34578999999999999999999999865421 001000000 0000000
Q ss_pred CCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcc
Q 013220 347 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 414 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~ 414 (447)
. . .....+..+.+||.+||+.+|++|||++++++|||
T Consensus 231 -----------------------~----~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 231 -----------------------L----K----DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -----------------------c----c----ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0 0 00123457889999999999999999999999998
No 201
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-36 Score=289.69 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=201.5
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.+.||+|+||.||+|.+..++..+|+|.+... ......+.+|+++++.+ +|++|+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~---- 70 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL------SHPNIIEYYENFLE---- 70 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC------CCCchhheeeeEec----
Confidence 599999999999999999999999999999987543 23355788899999999 78899999998764
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...++||||+ +++|.+++.......+++..+..++.|++.||+|||++ |++|+||+|+||++..
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~------------- 136 (256)
T cd08220 71 DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDK------------- 136 (256)
T ss_pred CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcC-------------
Confidence 46899999999 88999988765445588999999999999999999996 9999999999999932
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--c
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--F 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~ 270 (447)
....++|+|||.+...... .
T Consensus 137 ----------------------------------------------------------~~~~~~l~d~~~~~~~~~~~~~ 158 (256)
T cd08220 137 ----------------------------------------------------------HKMVVKIGDFGISKILSSKSKA 158 (256)
T ss_pred ----------------------------------------------------------CCCEEEEccCCCceecCCCccc
Confidence 2345899999998755432 2
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ .......+.. +
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~------~~~~~~~~~~--~-------------- 216 (256)
T cd08220 159 YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN------LPALVLKIMS--G-------------- 216 (256)
T ss_pred cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc------hHHHHHHHHh--c--------------
Confidence 23467889999999988888999999999999999999999996542 1111111100 0
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
....++...+..+.+++.+||+.||++|||+.|+|+||||
T Consensus 217 -------------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 217 -------------------------TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -------------------------CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 0011233456688999999999999999999999999997
No 202
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.2e-36 Score=293.81 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=193.3
Q ss_pred CceEEEEee--cccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKL--GWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~l--G~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++|.+.+.+ |+|+||.||++++..++..+|+|++...... ..|+.+...+. +|+||+++++.|...
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~~-----~h~~iv~~~~~~~~~--- 81 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLMK-----DNPNFIKLYYSVTTL--- 81 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHhh-----cCCCEEEEEEEEecC---
Confidence 457777776 9999999999999999999999987654321 12343333332 689999999998854
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+..++||||+ +++|.+.+.... .+++..+..++.|++.||+|||+. |++||||||+||++..
T Consensus 82 -~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~------------- 144 (267)
T PHA03390 82 -KGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDR------------- 144 (267)
T ss_pred -CeeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeC-------------
Confidence 5899999999 889999886543 589999999999999999999996 9999999999999943
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc-ceeEeecCcccccccccc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANKQFA 271 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kL~Dfg~a~~~~~~~~ 271 (447)
.. .++|+|||.+...... .
T Consensus 145 -----------------------------------------------------------~~~~~~l~dfg~~~~~~~~-~ 164 (267)
T PHA03390 145 -----------------------------------------------------------AKDRIYLCDYGLCKIIGTP-S 164 (267)
T ss_pred -----------------------------------------------------------CCCeEEEecCccceecCCC-c
Confidence 33 6999999998655433 2
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...++..|+|||.+.+..++.++|+|||||++|+|++|..||....... ..........
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~---------------- 223 (267)
T PHA03390 165 CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-----LDLESLLKRQ---------------- 223 (267)
T ss_pred cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-----hhHHHHHHhh----------------
Confidence 3467899999999998889999999999999999999999997442111 0111111100
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-hHHHhcCcccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-AQQCLQHPWLS 416 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-a~elL~hp~f~ 416 (447)
......++..+..+.+||.+||+.||.+||+ ++|+|+||||.
T Consensus 224 -----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 224 -----------------------QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred -----------------------cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 0111123345678999999999999999996 59999999996
No 203
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.8e-36 Score=291.44 Aligned_cols=280 Identities=30% Similarity=0.472 Sum_probs=207.5
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC-C
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP-N 113 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~-~ 113 (447)
|++.+.||.|+||.||+|++..++..||+|.++... .....+.+|+++++.+... .|++|+++++++..... +
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESF---EHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhcc---CCCCcceEEEEEeeccCCC
Confidence 788999999999999999998889999999886432 2234566788888888533 69999999999886532 2
Q ss_pred cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
....+++|||+.+++.+.+.......+++..+..++.|++.||+|||+. +++|+|++|+||++
T Consensus 78 ~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili---------------- 140 (287)
T cd07838 78 ELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILV---------------- 140 (287)
T ss_pred CceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEE----------------
Confidence 2359999999977888877654434589999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--cc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FA 271 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~~ 271 (447)
+....++|+|||.+...... ..
T Consensus 141 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 164 (287)
T cd07838 141 --------------------------------------------------------TSDGQVKIADFGLARIYSFEMALT 164 (287)
T ss_pred --------------------------------------------------------ccCCCEEEeccCcceeccCCcccc
Confidence 33577999999998665432 23
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH-hhhCCCCcc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK-IAIGGAQSK 350 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 350 (447)
...++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ .......+++..+..... +........
T Consensus 165 ~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 165 SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS------EADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred cccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC------hHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 3457889999999998889999999999999999999999997652 344444454443332211 100000000
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+... ..... .......+..+.+||.+||+.||.+||++.|+++||||
T Consensus 239 ~~~~~~---------~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 239 SSFPSY---------TPRSF-------KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhcccc---------cccch-------hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 000000 00000 01122446788999999999999999999999999998
No 204
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.6e-37 Score=297.61 Aligned_cols=263 Identities=24% Similarity=0.348 Sum_probs=204.2
Q ss_pred cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+..+|++.+.||+|+||+||+|.+..++..||+|++... ......+.+|+++++.+ +|+||+++++.+...
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~~- 75 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC------RSPYIVSFYGAFLNE- 75 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc------CCCCcceEeeeEecC-
Confidence 347899999999999999999999989999999976543 33456788999999998 889999999998854
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...++||||+ +++|...+... ..+++..+..++.+++.||.|||+..+++|+||+|+||++
T Consensus 76 ---~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~------------- 137 (284)
T cd06620 76 ---NNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV------------- 137 (284)
T ss_pred ---CEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE-------------
Confidence 6899999999 78888777543 3588999999999999999999973499999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+....++|+|||++......
T Consensus 138 -----------------------------------------------------------~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 138 -----------------------------------------------------------NSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred -----------------------------------------------------------CCCCcEEEccCCcccchhhhc
Confidence 33567999999988654322
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCC--chHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCE--DEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
....+++..|+|||.+.+..++.++|+|||||++|++++|..||.......... ...........+..
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 228 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE---------- 228 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc----------
Confidence 223478999999999988888999999999999999999999997653211000 00000000000000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCCh-hhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE-TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
....++. ..+..+.+||.+||+.||++|||++|+++||||...
T Consensus 229 ----------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 229 ----------------------------PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred ----------------------------cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0001111 245678899999999999999999999999999753
No 205
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.6e-36 Score=288.45 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=201.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.+.||.|+||.||+|.+..++..||+|++... ....+.+.+|+++++.+ .|+||+++++.+... .
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~--~ 72 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL------KHPNIVRYYDRIIDR--S 72 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc------CCCccceeeeeeecC--C
Confidence 489999999999999999999999999999987543 23345678899999999 789999999987643 3
Q ss_pred cceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH-----hhCCcccccCCCCCeEeeecCCCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLH-----RELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH-----~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
+...+++|||+ +++|.+.+.... ...+++..+..++.|++.||++|| +. +++|+||+|+||++
T Consensus 73 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili-------- 143 (265)
T cd08217 73 NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFL-------- 143 (265)
T ss_pred CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEE--------
Confidence 46789999999 788988886532 245889999999999999999999 85 99999999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
+....++|+|||.+..
T Consensus 144 ----------------------------------------------------------------~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 144 ----------------------------------------------------------------DANNNVKLGDFGLAKI 159 (265)
T ss_pred ----------------------------------------------------------------ecCCCEEEeccccccc
Confidence 3356799999999876
Q ss_pred cccc---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 266 ANKQ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 266 ~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
.... .....++..|+|||.+.+..++.++|+||||+++++|++|..||...+ .. . +.+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~-~---~~~~~~~~~--- 226 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QL-Q---LASKIKEGK--- 226 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HH-H---HHHHHhcCC---
Confidence 5432 223468899999999988888999999999999999999999997542 11 1 111100000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...++...+..+.+++.+||+.+|++|||++++|+|||+
T Consensus 227 ----------------------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 ----------------------------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ----------------------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 011334456789999999999999999999999999996
No 206
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.3e-36 Score=294.20 Aligned_cols=276 Identities=32% Similarity=0.520 Sum_probs=209.5
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
|.+.+.||.|++|.||+|.+..+++.+++|.+.... .....+.+|+++++.+ .|++|+++++.+...
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~---- 70 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL------NHPNIIKLLDVFRHK---- 70 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh------cCCCcchHHHhhccC----
Confidence 677889999999999999998899999999876443 2345778899999999 789999999998753
Q ss_pred ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
...++||||+++++.+.+.... ..+++..+..++.|++.||+|||++ +|+|+||||+||++
T Consensus 71 ~~~~~v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili----------------- 131 (283)
T cd05118 71 GDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLI----------------- 131 (283)
T ss_pred CCEEEEEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEE-----------------
Confidence 7899999999778888776533 4589999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
+.+..++|+|||.+...... ..
T Consensus 132 -------------------------------------------------------~~~~~~~l~df~~~~~~~~~~~~~~ 156 (283)
T cd05118 132 -------------------------------------------------------NTEGVLKLADFGLARSFGSPVRPYT 156 (283)
T ss_pred -------------------------------------------------------CCCCcEEEeeeeeeEecCCCccccc
Confidence 33567999999998655432 22
Q ss_pred cCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 272 EEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
...++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...+ .......+.+..+..............
T Consensus 157 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 157 HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS------EIDQLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred CccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCchHhcccchhhh
Confidence 34578899999999876 68899999999999999999999997653 344455555555554433322111110
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.... ........... ....+..+..+.+||.+||+.||.+||++.+++.||||
T Consensus 231 ~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 231 RNYK-----FSFPKKAGMPL-------PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhh-----hhhccccccCH-------HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0000 00000000000 01223457789999999999999999999999999997
No 207
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.3e-36 Score=288.04 Aligned_cols=252 Identities=30% Similarity=0.426 Sum_probs=200.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
++|++.+.||.|+||.||+|.+..++..+++|++.... ...+.+.+|+++++.+ +|+||+++++.+.. +
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~----~ 72 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC------RHPNIVAYFGSYLR----R 72 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC------CCCChhceEEEEEe----C
Confidence 57999999999999999999998889999999876542 3456788999999999 89999999998874 4
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
..+|++|||+ +++|..++.... ..+++..+..++.|++.||+|||++ ||+|+||+|+||++
T Consensus 73 ~~~~l~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i---------------- 134 (262)
T cd06613 73 DKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILL---------------- 134 (262)
T ss_pred CEEEEEEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEE----------------
Confidence 6899999999 678887775432 4589999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||.+...... .
T Consensus 135 --------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~ 158 (262)
T cd06613 135 --------------------------------------------------------TEDGDVKLADFGVSAQLTATIAKR 158 (262)
T ss_pred --------------------------------------------------------CCCCCEEECccccchhhhhhhhcc
Confidence 33567999999998654432 2
Q ss_pred ccCCCCCCccChHHhhcC---CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 271 AEEIQTRQYRAPEVILRA---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+. ......+ ...+..+.
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~------~~~~~~~-~~~~~~~~------- 224 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP------MRALFLI-SKSNFPPP------- 224 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HhccCCCc-------
Confidence 334678899999999876 788999999999999999999999975421 1111110 00000000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 414 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~ 414 (447)
........+.++.+||.+||..+|..|||+++++.|+|
T Consensus 225 -----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 -----------------------------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred -----------------------------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00112334668999999999999999999999999998
No 208
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.8e-36 Score=287.05 Aligned_cols=249 Identities=28% Similarity=0.423 Sum_probs=201.9
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.+.||.|+||.||.+++..++..+++|.+... ......+.+|+++++.+ +|+||+++++++...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~~--- 71 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL------QHPNIIAYYNHFMDD--- 71 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC------CCCCeeEEEeEEecC---
Confidence 599999999999999999999999999999976532 33345678999999998 789999999999753
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
..++++|||+ +++|.+.+.......+++..+..++.|++.||+|||+. |++|+||+|+||++.
T Consensus 72 -~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~-------------- 135 (256)
T cd08221 72 -NTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLT-------------- 135 (256)
T ss_pred -CeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEe--------------
Confidence 6899999999 88999988765444588999999999999999999996 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-- 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-- 270 (447)
....++|+|||.+.......
T Consensus 136 ----------------------------------------------------------~~~~~kl~d~~~~~~~~~~~~~ 157 (256)
T cd08221 136 ----------------------------------------------------------KAGLIKLGDFGISKILGSEYSM 157 (256)
T ss_pred ----------------------------------------------------------CCCCEEECcCcceEEccccccc
Confidence 35679999999986544322
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....+++.|+|||.+.+..++.++|+|||||++|+|++|..||.... .......+. .+..+
T Consensus 158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~--~~~~~---------- 219 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN------PLNLVVKIV--QGNYT---------- 219 (256)
T ss_pred ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHH--cCCCC----------
Confidence 34568999999999988888999999999999999999999996532 111111111 01110
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+...+..+.++|.+||+.+|++||+++++|+|||+
T Consensus 220 -----------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 -----------------------------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -----------------------------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0123346688899999999999999999999999996
No 209
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=7.6e-37 Score=297.40 Aligned_cols=265 Identities=22% Similarity=0.330 Sum_probs=201.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
..|...+.||+|+||.||++.+..++..||+|.+.... .....+.+|+.++..+. .|+||+++++++...
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~iv~~~~~~~~~--- 75 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-----DCPYIVKFYGALFRE--- 75 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-----CCCCEeeeeeEEecC---
Confidence 35677789999999999999999999999999876432 33456788999888884 589999999987743
Q ss_pred cceEEEEEecccccHHHHHH---hhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 114 GQHLCMVLEFLGDSLLRLIK---YSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~---~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+++|||++.++.++.. ......+++..+..++.|++.||+|||++.+|+||||||+||++.
T Consensus 76 -~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~------------ 142 (288)
T cd06616 76 -GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD------------ 142 (288)
T ss_pred -CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc------------
Confidence 5789999999766655432 222345899999999999999999999744999999999999993
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
....++|+|||++......
T Consensus 143 ------------------------------------------------------------~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 143 ------------------------------------------------------------RNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ------------------------------------------------------------cCCcEEEeecchhHHhccCC
Confidence 3456999999998654322
Q ss_pred -cccCCCCCCccChHHhhcC---CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 270 -FAEEIQTRQYRAPEVILRA---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
.....++..|+|||.+.+. .++.++|||||||++|+|++|..||.... .....+.+.....+..+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~--- 231 (288)
T cd06616 163 AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--------SVFDQLTQVVKGDPPIL--- 231 (288)
T ss_pred ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--------hHHHHHhhhcCCCCCcC---
Confidence 2334678899999999876 58899999999999999999999996431 11122222211111000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~ 423 (447)
....+..++.++.+||.+||+.||++|||++++++||||+.....+.
T Consensus 232 -------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~~~ 278 (288)
T cd06616 232 -------------------------------SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEERNV 278 (288)
T ss_pred -------------------------------CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhcch
Confidence 00011235668999999999999999999999999999987554433
No 210
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-38 Score=312.81 Aligned_cols=268 Identities=27% Similarity=0.385 Sum_probs=212.0
Q ss_pred CCCCccccccCccccC----CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-H---HhHHHHHHHHHHHHHhhc
Q 013220 20 RKGGYHAVRVGDLFNG----GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-A---QFAQAALHEIEVLSAVAD 91 (447)
Q Consensus 20 ~~~~~~~~~~g~~~~~----~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~---~~~~~~~~E~~~l~~l~~ 91 (447)
++|+..-=.+.+++.. ..|.=.+.||.|+||.||-|++..+.+.||||.+... + ..-+++..|++.|+.+
T Consensus 6 r~GslKDPeiA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-- 83 (948)
T KOG0577|consen 6 RPGSLKDPEIADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-- 83 (948)
T ss_pred CCCCCCCchHHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc--
Confidence 4444444445565553 3488888999999999999999999999999965432 1 2235678899999999
Q ss_pred CCCCCcceeeeecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCC
Q 013220 92 GDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLK 171 (447)
Q Consensus 92 ~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dik 171 (447)
.|||+|.|-++|.. ....|+|||||-|+-.+++.-.+ +++.+-++..|+.+.+.||+|||+. +.||||||
T Consensus 84 ----~HPntieYkgCyLr----e~TaWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiK 153 (948)
T KOG0577|consen 84 ----RHPNTIEYKGCYLR----EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIK 153 (948)
T ss_pred ----cCCCcccccceeec----cchHHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhcc
Confidence 89999999999985 37899999999666666654333 6799999999999999999999996 99999999
Q ss_pred CCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCc
Q 013220 172 PENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI 251 (447)
Q Consensus 172 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (447)
..|||++ .
T Consensus 154 AGNILLs------------------------------------------------------------------------e 161 (948)
T KOG0577|consen 154 AGNILLS------------------------------------------------------------------------E 161 (948)
T ss_pred ccceEec------------------------------------------------------------------------C
Confidence 9999994 4
Q ss_pred ccceeEeecCcccccccccccCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHH
Q 013220 252 DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHL 328 (447)
Q Consensus 252 ~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~ 328 (447)
.+.|||+|||.+.. ..+...++|||+|||||+|. .+.|+.++||||||++..+|...++|+++.. .|
T Consensus 162 ~g~VKLaDFGSAsi-~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN---------AM 231 (948)
T KOG0577|consen 162 PGLVKLADFGSASI-MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---------AM 231 (948)
T ss_pred CCeeeeccccchhh-cCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch---------HH
Confidence 67899999999854 34557789999999999986 4679999999999999999999999987542 22
Q ss_pred HHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh-hhHHHHHHHHhhccccCCCCCCChH
Q 013220 329 ALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE-TDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 329 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
.-++-+-...+ +.+.+ +-++.|+.|+..||+.=|.+|||.+
T Consensus 232 SALYHIAQNes--------------------------------------PtLqs~eWS~~F~~Fvd~CLqKipqeRptse 273 (948)
T KOG0577|consen 232 SALYHIAQNES--------------------------------------PTLQSNEWSDYFRNFVDSCLQKIPQERPTSE 273 (948)
T ss_pred HHHHHHHhcCC--------------------------------------CCCCCchhHHHHHHHHHHHHhhCcccCCcHH
Confidence 22222211111 11111 2377899999999999999999999
Q ss_pred HHhcCccccccc
Q 013220 408 QCLQHPWLSLRN 419 (447)
Q Consensus 408 elL~hp~f~~~~ 419 (447)
++|+|+|+.-.+
T Consensus 274 ~ll~H~fv~R~R 285 (948)
T KOG0577|consen 274 ELLKHRFVLRER 285 (948)
T ss_pred HHhhcchhccCC
Confidence 999999998654
No 211
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.7e-36 Score=293.59 Aligned_cols=249 Identities=27% Similarity=0.384 Sum_probs=197.0
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||+|+||+||+|.+..+++.||+|.+.... .....+.+|+++++.+ +|++|+++++.+.. ....|+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~----~~~~~l 70 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV------SSRFIVSLAYAFET----KDDLCL 70 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC------CCCCEeeeeeEEec----CCeEEE
Confidence 699999999999999999999999876432 2234567899999999 78999999998874 368999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|.+.+.......+++..+..++.|++.||.|||++ |++|+||+|+||++
T Consensus 71 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~--------------------- 128 (277)
T cd05577 71 VMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLL--------------------- 128 (277)
T ss_pred EEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEE---------------------
Confidence 99999 78998887654434689999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--ccccCCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQT 276 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~~~~~~gt 276 (447)
+.+..++|+|||.+..... ......++
T Consensus 129 ---------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05577 129 ---------------------------------------------------DDHGNVRISDLGLAVELKGGKKIKGRAGT 157 (277)
T ss_pred ---------------------------------------------------CCCCCEEEccCcchhhhccCCccccccCC
Confidence 3356799999998865432 22234678
Q ss_pred CCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhccc
Q 013220 277 RQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 356 (447)
Q Consensus 277 ~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 356 (447)
..|+|||.+.+..++.++|+|||||++|+|++|..||...... .....+.+.
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~---------------------- 209 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK------VEKEELKRR---------------------- 209 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc------ccHHHHHhc----------------------
Confidence 8999999998888999999999999999999999999755311 000111000
Q ss_pred chhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 357 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
........+...+..+.++|.+||+.||++|| ++.++++||||+..+
T Consensus 210 ----------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 210 ----------------TLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred ----------------cccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 00011123334567889999999999999999 899999999998655
No 212
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.1e-36 Score=293.90 Aligned_cols=250 Identities=26% Similarity=0.399 Sum_probs=192.3
Q ss_pred eecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEE
Q 013220 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLC 118 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~ 118 (447)
.||+|+||.||+|.+..++..+|+|++.... .......+|..+++.+... +|++|+.++..+... +..+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~----~~~~ 73 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG---DCPFIVCMTYAFHTP----DKLC 73 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhC---CCCcEeEEEEEEecC----CeEE
Confidence 3799999999999999999999999875432 1122344555555555432 789999999888743 5899
Q ss_pred EEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcC
Q 013220 119 MVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILE 197 (447)
Q Consensus 119 lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~ 197 (447)
+||||+ +++|...+... ..+++..+..++.|++.||+|||++ +|+|+||||+||++
T Consensus 74 lv~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~-------------------- 130 (279)
T cd05633 74 FILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILL-------------------- 130 (279)
T ss_pred EEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEE--------------------
Confidence 999999 88888777543 3489999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-cccCCCC
Q 013220 198 RPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAEEIQT 276 (447)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~gt 276 (447)
+....++|+|||++...... .....|+
T Consensus 131 ----------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 131 ----------------------------------------------------DEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred ----------------------------------------------------CCCCCEEEccCCcceeccccCccCcCCC
Confidence 33567999999998654322 2334689
Q ss_pred CCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcc
Q 013220 277 RQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 355 (447)
Q Consensus 277 ~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (447)
..|+|||.+.+ ..++.++|+||+||++|+|++|..||...... .........
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~----------------------- 211 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHEIDRMT----------------------- 211 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc----CHHHHHHHh-----------------------
Confidence 99999999874 56789999999999999999999999754211 000100000
Q ss_pred cchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 356 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
......++...+..+.++|.+||+.||.+|| |++++++||||+..+
T Consensus 212 ------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 212 ------------------LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred ------------------hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 0011123445577899999999999999999 699999999999865
No 213
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3e-36 Score=296.05 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=190.1
Q ss_pred CCceEEEEeecccCceEEEEEEeCC----------------CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTR----------------TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSN 96 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~ 96 (447)
.++|++.++||+|+||.||+|++.. ++..||+|++... ......+.+|+++++.+ .
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~ 77 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL------K 77 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc------C
Confidence 4789999999999999999997532 3457999987653 23345788999999998 7
Q ss_pred cceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhcc-----------------CCCCHHHHHHHHHHHHHHHHH
Q 013220 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY-----------------KGLELNKVREICKYILTGLDY 158 (447)
Q Consensus 97 ~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~-----------------~~l~~~~~~~i~~qil~aL~~ 158 (447)
|+||+++++++... ...++||||+ +++|.+++..... ..++...+..++.|++.||+|
T Consensus 78 h~niv~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 153 (304)
T cd05096 78 DPNIIRLLGVCVDE----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKY 153 (304)
T ss_pred CCCeeEEEEEEecC----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence 89999999998754 5799999999 8899888754321 125667888999999999999
Q ss_pred HHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCC
Q 013220 159 LHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGG 238 (447)
Q Consensus 159 lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (447)
||+. ||+||||||+||++
T Consensus 154 lH~~-~ivH~dlkp~Nill------------------------------------------------------------- 171 (304)
T cd05096 154 LSSL-NFVHRDLATRNCLV------------------------------------------------------------- 171 (304)
T ss_pred HHHC-CccccCcchhheEE-------------------------------------------------------------
Confidence 9996 99999999999999
Q ss_pred CCCCCCCccCCCcccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh--CCC
Q 013220 239 IELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT--GDM 311 (447)
Q Consensus 239 ~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~--g~~ 311 (447)
+....+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ +..
T Consensus 172 -----------~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 172 -----------GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred -----------cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 335679999999986543221 12345778999999988889999999999999999986 557
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHH
Q 013220 312 LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEF 391 (447)
Q Consensus 312 Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 391 (447)
||...+ ....+..+.+........ .....+...+..+.+|
T Consensus 241 p~~~~~------~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~l 280 (304)
T cd05096 241 PYGELT------DEQVIENAGEFFRDQGRQ----------------------------------VYLFRPPPCPQGLYEL 280 (304)
T ss_pred CCCcCC------HHHHHHHHHHHhhhcccc----------------------------------ccccCCCCCCHHHHHH
Confidence 776542 111222111110000000 0001123346689999
Q ss_pred HhhccccCCCCCCChHHHh
Q 013220 392 LVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 392 l~~~L~~dP~kRpta~elL 410 (447)
|.+||+.||++|||+.++.
T Consensus 281 i~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 281 MLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred HHHHccCCchhCcCHHHHH
Confidence 9999999999999999994
No 214
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.4e-36 Score=292.57 Aligned_cols=253 Identities=29% Similarity=0.439 Sum_probs=203.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
..|+..++||.|+||.||+|.+..++..||+|+++.. ......+.+|+++++.+ .|++|+++++++...
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~--- 74 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYVTKYYGSYLKG--- 74 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC------CCCCEeeEEEEEEEC---
Confidence 4688899999999999999999989999999987643 23356788899999988 789999999998753
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...++||||+ +++|.+.+.. ..+++..+..++.|++.||+|||+. +++|+||+|+||+++
T Consensus 75 -~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~-------------- 135 (277)
T cd06640 75 -TKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLS-------------- 135 (277)
T ss_pred -CEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEc--------------
Confidence 6899999999 8889887754 3478889999999999999999996 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
....++|+|||.+......
T Consensus 136 ----------------------------------------------------------~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 136 ----------------------------------------------------------EQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred ----------------------------------------------------------CCCCEEEcccccceeccCCccc
Confidence 3456999999998654322
Q ss_pred cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 270 FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... .........
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---------~~~~~~~~~------------ 216 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM---------RVLFLIPKN------------ 216 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH---------hHhhhhhcC------------
Confidence 12235788999999998888999999999999999999999999654211 000000000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
..+..+...+..+.+||.+||+.+|++|||++++++||||.....+
T Consensus 217 --------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06640 217 --------------------------NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK 262 (277)
T ss_pred --------------------------CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence 0011334456788999999999999999999999999999876544
No 215
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.5e-36 Score=291.58 Aligned_cols=278 Identities=30% Similarity=0.504 Sum_probs=208.1
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
|++.+.||.|++|+||+|+...+++.|+||.+..... ......+|++.++.+. +|++|+++++.+.. +.
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~----~~ 71 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----EHPNIVKLKEVFRE----ND 71 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc-----CCCCchhHHHHhhc----CC
Confidence 6889999999999999999988899999998765422 2224456888888883 49999999999875 46
Q ss_pred eEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 116 HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 116 ~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
..++||||+++++.+.+.......+++..+..++.|++.+|.|||++ |++|+||+|+||++
T Consensus 72 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i------------------ 132 (283)
T cd07830 72 ELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLV------------------ 132 (283)
T ss_pred cEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEE------------------
Confidence 89999999988898887654434589999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--ccccC
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEE 273 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~~~~~ 273 (447)
+....++|+|||.+..... .....
T Consensus 133 ------------------------------------------------------~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 133 ------------------------------------------------------SGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred ------------------------------------------------------cCCCCEEEeecccceeccCCCCcCCC
Confidence 3457799999999975543 22345
Q ss_pred CCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 274 IQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 274 ~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
.++..|+|||++.+ ..++.++|+||||+++++|++|+.||... ........+...++.++.............
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS------SEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC------ChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 67889999998864 45789999999999999999999999766 345556666666666554321111000000
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
+. ............ ......+..+.+||++||+.||++|||++|++.||||
T Consensus 233 ~~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 233 LG----------FRFPQFAPTSLH--QLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cc----------ccccccccccHH--HHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00 000000000000 0111225679999999999999999999999999997
No 216
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.5e-36 Score=293.06 Aligned_cols=248 Identities=30% Similarity=0.458 Sum_probs=202.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.+|.+.+.||+|+||.||+|++..++..||+|++.... .....+.+|.++++.+. .|+||+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~~~-- 73 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-----GHPGIIKLYYTFQD-- 73 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-----cCCCchhHHHHhcC--
Confidence 36999999999999999999999999999999887532 33456788999998883 49999999998875
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+...++|||++ +++|.+.+... ..+++..+..++.|++.||++||+. |++|+||+|+||++
T Consensus 74 --~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i------------- 135 (280)
T cd05581 74 --EENLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILL------------- 135 (280)
T ss_pred --CceEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEE-------------
Confidence 36899999999 89999888654 3589999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
..+..++|+|||.+.......
T Consensus 136 -----------------------------------------------------------~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 136 -----------------------------------------------------------DKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred -----------------------------------------------------------CCCCCEEecCCccccccCCcc
Confidence 335679999999886543221
Q ss_pred -----------------------ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHH
Q 013220 271 -----------------------AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDH 327 (447)
Q Consensus 271 -----------------------~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~ 327 (447)
....++..|+|||.+....++.++|+|||||+++++++|..||...+ ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~ 230 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN------EYLT 230 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc------HHHH
Confidence 12356789999999988888999999999999999999999997552 1111
Q ss_pred HHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-
Q 013220 328 LALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA- 406 (447)
Q Consensus 328 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta- 406 (447)
... +......++...++.+.+||.+||+.||.+|||+
T Consensus 231 ~~~------------------------------------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 268 (280)
T cd05581 231 FQK------------------------------------------ILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVN 268 (280)
T ss_pred HHH------------------------------------------HHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcc
Confidence 111 1111222444557789999999999999999999
Q ss_pred ---HHHhcCccc
Q 013220 407 ---QQCLQHPWL 415 (447)
Q Consensus 407 ---~elL~hp~f 415 (447)
+++++||||
T Consensus 269 ~~~~~ll~~~~~ 280 (280)
T cd05581 269 EGYDELKAHPFF 280 (280)
T ss_pred cCHHHHhcCCCC
Confidence 999999998
No 217
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.3e-36 Score=290.81 Aligned_cols=279 Identities=29% Similarity=0.462 Sum_probs=210.1
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
|++.++||.|++|.||+|.+..++..||+|.+... ......+.+|+++++.+ .|+|++++++++... ..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~--~~ 72 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL------RHPNIVRLKEIVTSK--GK 72 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc------cCCCeeeheeeEecC--CC
Confidence 68899999999999999999989999999988755 23345678899999999 789999999998753 13
Q ss_pred ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
...++||||++++|..++.... ..+++..+..++.|++.||+|||+. |++|+||+|+||++
T Consensus 73 ~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~----------------- 133 (287)
T cd07840 73 GSIYMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILI----------------- 133 (287)
T ss_pred CcEEEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEE-----------------
Confidence 6899999999778888776432 4589999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc----c
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----F 270 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~----~ 270 (447)
+.++.++|+|||.+...... .
T Consensus 134 -------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 134 -------------------------------------------------------NNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred -------------------------------------------------------cCCCCEEEccccceeeccCCCcccc
Confidence 34567999999999755433 2
Q ss_pred ccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+ ..++.++|||||||++|+|++|..||... +....+..+....+..+..........
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGS------TELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCchhhccccccc
Confidence 33466889999998765 35789999999999999999999999765 344555666665555543321111110
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+... . ........+... +....+..+.++|.+||+.+|++|||+.+++.||||
T Consensus 233 -~~~~~~-~-------~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 233 -PWFENL-K-------PKKPYKRRLREF--FKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred -hhhhhc-c-------ccccchhHHHHH--hcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 000000 0 000011111111 111136789999999999999999999999999997
No 218
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.4e-36 Score=294.48 Aligned_cols=252 Identities=26% Similarity=0.391 Sum_probs=198.5
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.|++.+.||+|+||.||+|.+..+++.|++|.+.... .....+.+|+++++.+ .|+||+++++.+..
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~--- 72 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA------ENPFVVSMFCSFET--- 72 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC------CCCCeeeeEEEEec---
Confidence 6999999999999999999999999999999876543 2345677899999988 78999999998874
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+.++++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+. |++||||||+||++
T Consensus 73 -~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll-------------- 134 (305)
T cd05609 73 -KRHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLI-------------- 134 (305)
T ss_pred -CCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEE--------------
Confidence 46899999999 78898888654 3588999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--- 268 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--- 268 (447)
+..+.++|+|||.+.....
T Consensus 135 ----------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 135 ----------------------------------------------------------TSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ----------------------------------------------------------CCCCCEEEeeCCCccccCcCcc
Confidence 3356799999998753110
Q ss_pred ---------------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 269 ---------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 269 ---------------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
......++..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+ ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~------~~~~~~~~~~ 230 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT------PEELFGQVIS 230 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh
Confidence 0112356788999999988889999999999999999999999997542 1111111110
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC---hHHHh
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT---AQQCL 410 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt---a~elL 410 (447)
+..+ .+......+..+.+||.+||+.||++||+ +.++|
T Consensus 231 --~~~~-------------------------------------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 231 --DDIE-------------------------------------WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred --cccC-------------------------------------CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 0000 00011134668899999999999999998 79999
Q ss_pred cCcccccc
Q 013220 411 QHPWLSLR 418 (447)
Q Consensus 411 ~hp~f~~~ 418 (447)
+||||...
T Consensus 272 ~~~~~~~~ 279 (305)
T cd05609 272 QHRFFLGL 279 (305)
T ss_pred hCccccCC
Confidence 99999654
No 219
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.2e-36 Score=294.79 Aligned_cols=282 Identities=27% Similarity=0.433 Sum_probs=209.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC-
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG- 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~- 111 (447)
++|++.+.||+|+||+||+|.+..+++.||+|.++... .....+.+|+++++.+ +|+||+++++++....
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l------~h~~i~~~~~~~~~~~~ 80 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL------NHRNIVNLKEIVTDKQD 80 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC------CCCCeeeeeheecCcch
Confidence 68999999999999999999999899999999876432 2234667899999999 7899999999887542
Q ss_pred -----CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCC
Q 013220 112 -----PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186 (447)
Q Consensus 112 -----~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~ 186 (447)
..+..+++||||+++++...+... ...+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili--------- 149 (302)
T cd07864 81 ALDFKKDKGAFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILL--------- 149 (302)
T ss_pred hhhccccCCcEEEEEcccCccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEE---------
Confidence 122389999999977877776543 34589999999999999999999996 99999999999999
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc
Q 013220 187 PIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA 266 (447)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~ 266 (447)
+....++|+|||.+...
T Consensus 150 ---------------------------------------------------------------~~~~~~kl~dfg~~~~~ 166 (302)
T cd07864 150 ---------------------------------------------------------------NNKGQIKLADFGLARLY 166 (302)
T ss_pred ---------------------------------------------------------------CCCCcEEeCcccccccc
Confidence 34567999999998654
Q ss_pred cccc----ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 267 NKQF----AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 267 ~~~~----~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
.... ....++..|+|||.+.+. .++.++|||||||++++|++|+.||... +....+..+.+..+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 167 NSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQAN------QELAQLELISRLCGSPCPA 240 (302)
T ss_pred cCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCChh
Confidence 3221 223457889999988754 4689999999999999999999999754 3555666666666655543
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
....... ...+........ ....... .....+..+.++|.+||+.||.+|||+.+++.||||
T Consensus 241 ~~~~~~~-~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 241 VWPDVIK-LPYFNTMKPKKQ--------YRRRLRE---EFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hcccccc-cccccccccccc--------cccchhh---hcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 2111100 001100000000 0000000 011235688999999999999999999999999997
No 220
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-36 Score=297.80 Aligned_cols=254 Identities=28% Similarity=0.461 Sum_probs=200.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+.|.....||.|+||.||++.+..++..||||.+.... .....+.+|+.+++.+ +|+||+++++.+.. +
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l------~h~~ii~~~~~~~~----~ 91 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY------HHENVVDMYNSYLV----G 91 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC------CCCcHHHHHHheec----C
Confidence 45666788999999999999998899999999875432 3345688899999988 78999999998874 4
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+..++||||+ +++|.+.+.. ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 92 ~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill---------------- 151 (292)
T cd06658 92 DELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILL---------------- 151 (292)
T ss_pred CeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEE----------------
Confidence 7899999999 7788777643 3488999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+.+..++|+|||++...... .
T Consensus 152 --------------------------------------------------------~~~~~~kL~dfg~~~~~~~~~~~~ 175 (292)
T cd06658 152 --------------------------------------------------------TSDGRIKLSDFGFCAQVSKEVPKR 175 (292)
T ss_pred --------------------------------------------------------cCCCCEEEccCcchhhcccccccC
Confidence 33567999999988643322 1
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ ....+..+. ...+..
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~---~~~~~~--------- 237 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP------PLQAMRRIR---DNLPPR--------- 237 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH---hcCCCc---------
Confidence 23468899999999988889999999999999999999999997542 111111111 010100
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.......+..+.+||.+||..||.+|||++++++||||.....
T Consensus 238 ---------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~ 280 (292)
T cd06658 238 ---------------------------VKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGP 280 (292)
T ss_pred ---------------------------cccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCC
Confidence 0011123557889999999999999999999999999997553
No 221
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.7e-36 Score=289.82 Aligned_cols=246 Identities=21% Similarity=0.312 Sum_probs=197.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
..|.+.++||+|+||.||+|.+..++..||+|.+..+......+.+|+++++.+ .|++|+++++.+... .
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~----~ 75 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI------KHPNLVQLLGVCTRE----P 75 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC------CCCChhheEEEEcCC----C
Confidence 569999999999999999999998999999999887665567788999999999 789999999987743 6
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
.++++|||+ +++|.+.+.......+++..+..++.|++.||+|||++ |++||||||+||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~----------------- 137 (263)
T cd05052 76 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLV----------------- 137 (263)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEE-----------------
Confidence 789999999 78999888654445588899999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccccc--
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAE-- 272 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-- 272 (447)
+....++|+|||.+.........
T Consensus 138 -------------------------------------------------------~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 138 -------------------------------------------------------GENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred -------------------------------------------------------cCCCcEEeCCCccccccccceeecc
Confidence 33567999999998654432111
Q ss_pred --CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 273 --EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 273 --~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
...+..|+|||.+.+..++.++|||||||++|+|++ |..||...+ .......+.. .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~---~------------ 221 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLEK---G------------ 221 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHC---C------------
Confidence 123567999999988889999999999999999998 999986542 1111111100 0
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+.++.++|.+||+.||++|||+.++++
T Consensus 222 --------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 222 --------------------------YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred --------------------------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 011123445678999999999999999999999975
No 222
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.4e-36 Score=290.18 Aligned_cols=252 Identities=29% Similarity=0.476 Sum_probs=196.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-----------HhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-----------QFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-----------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
+|.+.+.||.|+||.||+|.+..+++.||+|.++... ...+.+..|+++++.+ +|++|+++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~ 75 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL------DHLNIVQYLG 75 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc------CCCCcceEEE
Confidence 5899999999999999999998889999999765321 1234577899999988 7899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
++.. ....++||||+ +++|.+.+... ..+++..+..++.|++.||.|||++ |++|+||+|+||++
T Consensus 76 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~------- 141 (272)
T cd06629 76 FETT----EEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLV------- 141 (272)
T ss_pred Eecc----CCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEE-------
Confidence 8764 46899999999 88999887654 4588999999999999999999996 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+....++|+|||.+.
T Consensus 142 -----------------------------------------------------------------~~~~~~~l~d~~~~~ 156 (272)
T cd06629 142 -----------------------------------------------------------------DADGICKISDFGISK 156 (272)
T ss_pred -----------------------------------------------------------------cCCCeEEEeeccccc
Confidence 335679999999986
Q ss_pred ccccc-----cccCCCCCCccChHHhhcCC--CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCC
Q 013220 265 RANKQ-----FAEEIQTRQYRAPEVILRAG--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK 337 (447)
Q Consensus 265 ~~~~~-----~~~~~gt~~y~aPE~l~~~~--~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~ 337 (447)
..... .....++..|+|||.+.... ++.++|+||||+++|++++|..||...+ ....+.+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~---------~~~~~~~~~~~ 227 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE---------AIAAMFKLGNK 227 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc---------hHHHHHHhhcc
Confidence 54322 12235788999999987654 7899999999999999999999995331 11111111100
Q ss_pred CCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 338 MPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
... ... .......++..+.+||.+||+.+|++|||++++|+||||
T Consensus 228 ~~~---------------------------~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 228 RSA---------------------------PPI------PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ccC---------------------------CcC------CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 000 000 000112346789999999999999999999999999997
No 223
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=308.93 Aligned_cols=252 Identities=29% Similarity=0.401 Sum_probs=207.7
Q ss_pred EEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
-.+.||+|.||+||-|.++.+|+.||||++.+- ......+++|+++|+.+ .||+||.+.-.|.. .+.
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l------~HPGiV~le~M~ET----~er 637 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL------HHPGIVNLECMFET----PER 637 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc------CCCCeeEEEEeecC----Cce
Confidence 357799999999999999999999999987643 23356899999999999 89999999988885 489
Q ss_pred EEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 117 LCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 117 ~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
+++|||.+.|++...+.......+++...+.++.||+.||.|||-+ +|+|.|+||+|+|+...
T Consensus 638 vFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~---------------- 700 (888)
T KOG4236|consen 638 VFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASA---------------- 700 (888)
T ss_pred EEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccC----------------
Confidence 9999999988887777666666799999999999999999999997 99999999999999542
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--cccCC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEI 274 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~ 274 (447)
+.-..+||||||+|..+... ....+
T Consensus 701 -----------------------------------------------------~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 701 -----------------------------------------------------SPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred -----------------------------------------------------CCCCceeeccccceeecchhhhhhhhc
Confidence 22346999999999876532 34458
Q ss_pred CCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHH-HhCCCCHHhhhCCCCccchh
Q 013220 275 QTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME-LIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 275 gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 353 (447)
||+.|.|||++..+.|...-||||+|||+|.-+.|.+||... ++..+++.. .+=-+|..
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--------EdIndQIQNAaFMyPp~P------------ 787 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--------EDINDQIQNAAFMYPPNP------------ 787 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--------cchhHHhhccccccCCCc------------
Confidence 999999999999999999999999999999999999999633 222222221 01111111
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
-++++.++.|||..+|+..-.+|-+.++.|.|||+++-
T Consensus 788 ---------------------------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 788 ---------------------------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred ---------------------------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 13568899999999999999999999999999999864
No 224
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.2e-36 Score=299.97 Aligned_cols=279 Identities=29% Similarity=0.478 Sum_probs=208.3
Q ss_pred CceE-EEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhH---------------HHHHHHHHHHHHhhcCCCCCcce
Q 013220 36 GRYI-AQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFA---------------QAALHEIEVLSAVADGDPSNEKC 99 (447)
Q Consensus 36 ~~y~-l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~---------------~~~~~E~~~l~~l~~~~~~~~~~ 99 (447)
++|. +.+.||.|+||+||+|.+..+++.||+|.++...... ..+.+|+++++.+ .|+|
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~ 81 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI------KHEN 81 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC------CCcc
Confidence 6776 4577999999999999999999999999876442211 2467899999999 7899
Q ss_pred eeeecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeee
Q 013220 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 100 Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
|+++++++.. +...++||||+.++|.+.+... ..+++..+..++.|++.||+|||+. ||+|+||+|+||++
T Consensus 82 iv~~~~~~~~----~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nill-- 152 (335)
T PTZ00024 82 IMGLVDVYVE----GDFINLVMDIMASDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIFI-- 152 (335)
T ss_pred eeeeeEEEec----CCcEEEEEeccccCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeEE--
Confidence 9999998874 4689999999988888887643 3488999999999999999999996 99999999999999
Q ss_pred cCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEee
Q 013220 180 TIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVD 259 (447)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~D 259 (447)
+....++|+|
T Consensus 153 ----------------------------------------------------------------------~~~~~~kl~d 162 (335)
T PTZ00024 153 ----------------------------------------------------------------------NSKGICKIAD 162 (335)
T ss_pred ----------------------------------------------------------------------CCCCCEEECC
Confidence 3356799999
Q ss_pred cCcccccc-----------------cccccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCC
Q 013220 260 FGNACRAN-----------------KQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGF 321 (447)
Q Consensus 260 fg~a~~~~-----------------~~~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~ 321 (447)
||.+.... .......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~----- 237 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE----- 237 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----
Confidence 99886443 111123457889999999764 4689999999999999999999999866
Q ss_pred CCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCC
Q 013220 322 CEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE 401 (447)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~ 401 (447)
++...+..+.+.++..+.......... +.+.. +.......... .....+..+.+||.+||+.+|+
T Consensus 238 -~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~ 302 (335)
T PTZ00024 238 -NEIDQLGRIFELLGTPNEDNWPQAKKL-PLYTE------FTPRKPKDLKT-------IFPNASDDAIDLLQSLLKLNPL 302 (335)
T ss_pred -CHHHHHHHHHHHhCCCchhhCcchhhc-ccccc------cCcCCcccHHH-------hCcCCChHHHHHHHHHcCCCch
Confidence 345566667776666554321000000 00000 00000000000 1123356788999999999999
Q ss_pred CCCChHHHhcCccccccc
Q 013220 402 KRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 402 kRpta~elL~hp~f~~~~ 419 (447)
+|||++|+|.||||+...
T Consensus 303 ~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 303 ERISAKEALKHEYFKSDP 320 (335)
T ss_pred hccCHHHHhcCcccCCCC
Confidence 999999999999998643
No 225
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.7e-36 Score=290.06 Aligned_cols=275 Identities=30% Similarity=0.491 Sum_probs=211.1
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
|++.+.||+|++|.||+|.+..+++.||+|++... ......+..|+++++.+ .|++|+++++++...
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~---- 70 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL------KHPNIVKLLDVIHTE---- 70 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc------CCCCHHHHHhhhhcC----
Confidence 67788999999999999999999999999988764 33345677899999998 789999999998854
Q ss_pred ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
...++||||++++|.+++.... ..+++..+..++.|++.||++||+. ||+|+||+|+||++
T Consensus 71 ~~~~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~----------------- 131 (282)
T cd07829 71 RKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILI----------------- 131 (282)
T ss_pred CceEEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEE-----------------
Confidence 6899999999878988887543 3589999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
+....++|+|||.+...... ..
T Consensus 132 -------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (282)
T cd07829 132 -------------------------------------------------------NRDGVLKLADFGLARAFGIPLRTYT 156 (282)
T ss_pred -------------------------------------------------------cCCCCEEEecCCcccccCCCccccC
Confidence 34567999999998654332 22
Q ss_pred cCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 272 EEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
...++..|+|||.+.+. .++.++|+|||||+++++++|..||... .....+..+.+..+...+..........
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD------SEIDQLFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence 33557889999999876 7899999999999999999999999765 3455556666666666554422221111
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.+... ..... ...... .....+..+.++|.+||..||++||++.+++.||||
T Consensus 231 -~~~~~--~~~~~---~~~~~~-------~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 231 -DYKPT--FPKFP---PKDLEK-------VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred -ccccc--ccccC---ccchHH-------hcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 00000 00000 000000 111236689999999999999999999999999998
No 226
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.5e-36 Score=286.01 Aligned_cols=246 Identities=22% Similarity=0.365 Sum_probs=197.4
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+|++.++||.|+||.||++++..++..||+|.++.. ....+.+.+|+.+++.+ .|+||+++++.+.. +
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~----~ 70 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM------KHPNIVAFKESFEA----D 70 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC------CCCCcceEEEEEEE----C
Confidence 589999999999999999999999999999987532 33456778899999988 78999999998874 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
..++++|||+ ++++.+.+.......+++..+..++.|++.||.+||++ ||+|+||||+||++
T Consensus 71 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili---------------- 133 (255)
T cd08219 71 GHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFL---------------- 133 (255)
T ss_pred CEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEE----------------
Confidence 6899999999 78898887654445688999999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||.+...... .
T Consensus 134 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 134 --------------------------------------------------------TQNGKVKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred --------------------------------------------------------CCCCcEEEcccCcceeeccccccc
Confidence 33567999999998654332 2
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....++..|+|||++.+..++.++|+||||+++|+|++|..||...+ .... ...+....
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~------~~~~---~~~~~~~~------------ 216 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS------WKNL---ILKVCQGS------------ 216 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC------HHHH---HHHHhcCC------------
Confidence 23468899999999988889999999999999999999999996542 0111 11110000
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+..+.+||.+||+.||++|||+.++++-
T Consensus 217 --------------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 --------------------------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --------------------------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 001223345678899999999999999999999864
No 227
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.3e-36 Score=286.34 Aligned_cols=248 Identities=27% Similarity=0.453 Sum_probs=198.5
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH------HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
+|+..+.||+|++|.||+|.+..++..|++|.+.... ...+.+.+|+++++.+ +|++|+++++.+..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~- 73 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL------QHPNIVQYLGTERE- 73 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc------CCCCchheeeeEec-
Confidence 5788899999999999999998889999999875432 2345788899999998 78999999998764
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+...+++|||+ +++|.+.+... ..+++..+..++.|++.||+|||+. ||+|+||+|+||++
T Consensus 74 ---~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~------------ 135 (258)
T cd06632 74 ---EDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILV------------ 135 (258)
T ss_pred ---CCeEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEE------------
Confidence 36899999999 78898887643 3488899999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+....++|+|||.+......
T Consensus 136 ------------------------------------------------------------~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 136 ------------------------------------------------------------DTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred ------------------------------------------------------------CCCCCEEEccCccceecccc
Confidence 33567999999988654332
Q ss_pred --cccCCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCC
Q 013220 270 --FAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 346 (447)
Q Consensus 270 --~~~~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (447)
.....++..|+|||.+.... ++.++|+|||||++|+|++|..||.... ......+.....
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~---------~~~~~~~~~~~~-------- 218 (258)
T cd06632 156 SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE---------GVAAVFKIGRSK-------- 218 (258)
T ss_pred ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc---------HHHHHHHHHhcc--------
Confidence 23456889999999997766 8899999999999999999999996432 111111110000
Q ss_pred CCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 347 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
....++...+..+.+|+.+||+.+|.+|||+.++|.|||+
T Consensus 219 -----------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 219 -----------------------------ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -----------------------------cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 0011233456788999999999999999999999999996
No 228
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=288.42 Aligned_cols=268 Identities=26% Similarity=0.412 Sum_probs=210.9
Q ss_pred eEEEEe-ecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 38 YIAQRK-LGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 38 y~l~~~-lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
|++... ||+|+|+.|--|....++..||||++.+.. .....+++|++++...+ +|+||+.+++.|.+. .
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq-----gh~nilqLiefFEdd----~ 149 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ-----GHKNILQLIEFFEDD----T 149 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc-----CCccHHHHHHHhccc----c
Confidence 666554 899999999999999999999999887765 45668999999998887 999999999999864 7
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
.+|+|||.| ||.|.+.+.... .|++.++..+...|+.||.|||.+ ||.|||+||+|||-...
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~p-------------- 212 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESP-------------- 212 (463)
T ss_pred eEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCC--------------
Confidence 899999999 999999887654 499999999999999999999998 99999999999997442
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc--c-----
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA--N----- 267 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~--~----- 267 (447)
+.-.-+||+||.+..-+ .
T Consensus 213 -------------------------------------------------------n~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 213 -------------------------------------------------------NKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred -------------------------------------------------------CCcCceeeeccccccccccCCCCCC
Confidence 22344899999877321 1
Q ss_pred ---cccccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 268 ---KQFAEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 268 ---~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
......+|+-.|||||+..- ..|+.++|.||||||+|-|+.|..||.+.=... +
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d-C----------------- 299 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD-C----------------- 299 (463)
T ss_pred CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc-C-----------------
Confidence 12334578899999999752 247899999999999999999999998762110 0
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChh----hHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET----DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
- +.++.-++.+- ..-++.|....+.||.. ++.+..|+++.+|..|+..|.+|.++|+|||+
T Consensus 300 -G-WdrGe~Cr~CQ-------------~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~ 364 (463)
T KOG0607|consen 300 -G-WDRGEVCRVCQ-------------NKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV 364 (463)
T ss_pred -C-ccCCCccHHHH-------------HHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence 0 01111111110 00145555566666664 58889999999999999999999999999999
Q ss_pred cccc
Q 013220 416 SLRN 419 (447)
Q Consensus 416 ~~~~ 419 (447)
.-..
T Consensus 365 ~~~~ 368 (463)
T KOG0607|consen 365 QRCA 368 (463)
T ss_pred cccc
Confidence 8654
No 229
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.4e-36 Score=289.70 Aligned_cols=246 Identities=29% Similarity=0.445 Sum_probs=197.5
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||.|++|.||+|++..++..||+|++.... ...+.+.+|+++++.+ +|+||+++++.+.. +...++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~----~~~~~l 70 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC------NHPFIVKLYRTFKD----KKYIYM 70 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC------CCCCEeeeeeeEEc----CCccEE
Confidence 699999999999999889999999876432 3346788899999999 78999999998764 468999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
+|||+ +++|.+.+... ..+++..+..++.|++.||+|||++ |++|+||+|+||++
T Consensus 71 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv--------------------- 126 (262)
T cd05572 71 LMEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLL--------------------- 126 (262)
T ss_pred EEecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEE---------------------
Confidence 99999 88999888654 3488999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--cccCCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQT 276 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~gt 276 (447)
+....++|+|||.+...... .....++
T Consensus 127 ---------------------------------------------------~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 155 (262)
T cd05572 127 ---------------------------------------------------DSNGYVKLVDFGFAKKLKSGQKTWTFCGT 155 (262)
T ss_pred ---------------------------------------------------cCCCCEEEeeCCcccccCcccccccccCC
Confidence 33567999999998755432 2234678
Q ss_pred CCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhccc
Q 013220 277 RQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 356 (447)
Q Consensus 277 ~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 356 (447)
..|+|||.+.+..++.++|+|||||++|+|++|..||..... ........... .
T Consensus 156 ~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~-~------------------ 209 (262)
T cd05572 156 PEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-------DPMEIYNDILK-G------------------ 209 (262)
T ss_pred cCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-------CHHHHHHHHhc-c------------------
Confidence 999999999888889999999999999999999999976531 01111111100 0
Q ss_pred chhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccc
Q 013220 357 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLR 418 (447)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~ 418 (447)
.....++...+..+.++|.+||+.||++||| ++|+++||||++.
T Consensus 210 ------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 210 ------------------NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred ------------------CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 0111233334678999999999999999999 9999999999864
No 230
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.4e-36 Score=294.76 Aligned_cols=254 Identities=26% Similarity=0.391 Sum_probs=201.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.+|.+.+.||+|+||+||+|++..+++.||+|.+... ....+.+.+|+++++.+ +|+||+++++++...
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l------~h~niv~~~~~~~~~- 87 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL------RHPNTIEYKGCYLRE- 87 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC------CCCCEEEEEEEEEeC-
Confidence 5799999999999999999999889999999987532 23345688899999998 889999999998753
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+..++||||+.+++.+.+.... ..+++..+..++.|++.||.|||+. ||+|+||+|+||++
T Consensus 88 ---~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~-------------- 148 (307)
T cd06607 88 ---HTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILL-------------- 148 (307)
T ss_pred ---CeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEE--------------
Confidence 6789999999878777765433 4589999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 271 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~ 271 (447)
+....++|+|||++..... ..
T Consensus 149 ----------------------------------------------------------~~~~~~kL~dfg~~~~~~~-~~ 169 (307)
T cd06607 149 ----------------------------------------------------------TEPGTVKLADFGSASLVSP-AN 169 (307)
T ss_pred ----------------------------------------------------------CCCCCEEEeecCcceecCC-CC
Confidence 3356799999998865432 23
Q ss_pred cCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 272 EEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
...++..|+|||++. ...++.++|+|||||++|+|++|..||...+ . ......+....+..
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~------~---~~~~~~~~~~~~~~------- 233 (307)
T cd06607 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------A---MSALYHIAQNDSPT------- 233 (307)
T ss_pred CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc------H---HHHHHHHhcCCCCC-------
Confidence 456788999999884 3457899999999999999999999996542 1 11111111000000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
..+...+..+.++|.+||..||++||++.+++.||||.....
T Consensus 234 ------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 234 ------------------------------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred ------------------------------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 001223567899999999999999999999999999987553
No 231
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8e-36 Score=285.68 Aligned_cols=248 Identities=29% Similarity=0.463 Sum_probs=198.7
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
||++.+.||+|+||.||+|.+..++..|++|+++.... ....+.+|+++++.+ +|++|+++++.+..
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~---- 70 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL------KHPNLVKYYGVEVH---- 70 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC------CCCChhheeeeEec----
Confidence 69999999999999999999988999999998775543 567889999999999 78899999998764
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
....++|+||+ +++|.+.+... ..+++..+..++.|++.||+|||+. ||+|+||+|+||++
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~--------------- 132 (264)
T cd06626 71 REKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFL--------------- 132 (264)
T ss_pred CCEEEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEE---------------
Confidence 46899999999 78898887653 2378889999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA- 271 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~- 271 (447)
+....++|+|||.+........
T Consensus 133 ---------------------------------------------------------~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 133 ---------------------------------------------------------DHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ---------------------------------------------------------CCCCCEEEcccccccccCCCCCc
Confidence 3356799999999865432211
Q ss_pred ------cCCCCCCccChHHhhcCC---CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 272 ------EEIQTRQYRAPEVILRAG---YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 272 ------~~~gt~~y~aPE~l~~~~---~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
...++..|+|||.+.+.. ++.++|+|||||++|++++|+.||...+ .. ......+....+
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~------~~--~~~~~~~~~~~~--- 224 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD------NE--FQIMFHVGAGHK--- 224 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc------ch--HHHHHHHhcCCC---
Confidence 235678999999998765 7899999999999999999999996442 11 111111111000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh--hhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE--TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
+.++. .++..+.+||.+||+.+|.+|||+.|++.|||+
T Consensus 225 -----------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 225 -----------------------------------PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred -----------------------------------CCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 01111 235678899999999999999999999999996
No 232
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.6e-36 Score=294.32 Aligned_cols=260 Identities=28% Similarity=0.460 Sum_probs=205.6
Q ss_pred cccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 27 VRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 27 ~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
+.+|+.. ++|.+.+.||+|+||.||++.+..++..||+|.+... ....+.+.+|+.+++.+ .|+||+++++
T Consensus 12 ~~~~~~~--~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~ 83 (293)
T cd06647 12 VSVGDPK--KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN------KHPNIVNYLD 83 (293)
T ss_pred eeccCch--hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc------CCCCeeehhh
Confidence 4556665 6899999999999999999998888999999987543 23346788899999888 7899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
.+... ...|+||||+ +++|.+.+.. ..+++..+..++.|++.||+|||++ |++|+|++|+||++.
T Consensus 84 ~~~~~----~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~------ 149 (293)
T cd06647 84 SYLVG----DELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG------ 149 (293)
T ss_pred eeeeC----CcEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEc------
Confidence 88753 6899999999 8899888754 2478889999999999999999996 999999999999993
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
....++|+|||++.
T Consensus 150 ------------------------------------------------------------------~~~~~kL~dfg~~~ 163 (293)
T cd06647 150 ------------------------------------------------------------------MDGSVKLTDFGFCA 163 (293)
T ss_pred ------------------------------------------------------------------CCCCEEEccCccee
Confidence 35679999999875
Q ss_pred ccccc---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 265 RANKQ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 265 ~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
..... .....++..|+|||.+.+..++.++|+|||||++|++++|..||...+... . +... +..+.
T Consensus 164 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~------~---~~~~-~~~~~- 232 (293)
T cd06647 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------A---LYLI-ATNGT- 232 (293)
T ss_pred cccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh------h---eeeh-hcCCC-
Confidence 43322 223467889999999988888999999999999999999999997543110 0 0000 00000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.....+..++..+.+||.+||..+|++||++.+++.||||+..+
T Consensus 233 ----------------------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 233 ----------------------------------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred ----------------------------------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 00011223456788999999999999999999999999998655
No 233
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1e-35 Score=286.43 Aligned_cols=250 Identities=28% Similarity=0.421 Sum_probs=194.3
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.....||+|+||.||+|++..++..|++|.+... ....+.+.+|+++++.+ .|+||+++++++.. +..
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~----~~~ 79 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL------KHRNIVQYLGSDSE----NGF 79 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc------CCCCeeeeeeeecc----CCE
Confidence 33445899999999999999889999999976543 33456788999999998 78999999998874 368
Q ss_pred EEEEEecc-cccHHHHHHhhccCCC--CHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGL--ELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l--~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
.+++|||+ +++|.+.+.... ..+ ++..+..++.|++.||+|||++ ||+||||||.||++..
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~-------------- 143 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNT-------------- 143 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcC--------------
Confidence 99999999 789998876532 234 7788889999999999999996 9999999999999932
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---cc
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QF 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---~~ 270 (447)
....++|+|||.+..... ..
T Consensus 144 ---------------------------------------------------------~~~~~~l~dfg~~~~~~~~~~~~ 166 (268)
T cd06624 144 ---------------------------------------------------------YSGVVKISDFGTSKRLAGINPCT 166 (268)
T ss_pred ---------------------------------------------------------CCCeEEEecchhheecccCCCcc
Confidence 134699999998864422 12
Q ss_pred ccCCCCCCccChHHhhcCC--CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 AEEIQTRQYRAPEVILRAG--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~--~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....++..|+|||.+.+.. ++.++|+|||||++|+|++|..||...... ... ....
T Consensus 167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~-----~~~---~~~~-------------- 224 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP-----QAA---MFKV-------------- 224 (268)
T ss_pred ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh-----hhh---Hhhh--------------
Confidence 2345789999999987643 788999999999999999999999643210 000 0000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
........++...++++.+|+.+||+.+|.+|||+.|++.||||
T Consensus 225 -----------------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 225 -----------------------GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -----------------------hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 00011112344556789999999999999999999999999997
No 234
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.2e-36 Score=284.46 Aligned_cols=250 Identities=25% Similarity=0.413 Sum_probs=199.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|.+.+.||.|+||.||+|.+..++..+|+|.+.... ...+.+.+|+++++.+ +|+||+++++.+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~------~h~~i~~~~~~~~~---- 70 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM------KHPNIVTFFASFQE---- 70 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC------CCCChhhhhheecc----
Confidence 5899999999999999999999999999999876542 2345678899999999 78999999998864
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
....+++|||+ +++|.+.+.......+++..+..++.|++.||+|||+. +++|+|+||+||++..
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~------------- 136 (257)
T cd08225 71 NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSK------------- 136 (257)
T ss_pred CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcC-------------
Confidence 36899999999 88998888654444578999999999999999999996 9999999999999933
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-- 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-- 270 (447)
....++|+|||.+.......
T Consensus 137 ----------------------------------------------------------~~~~~~l~d~~~~~~~~~~~~~ 158 (257)
T cd08225 137 ----------------------------------------------------------NGMVAKLGDFGIARQLNDSMEL 158 (257)
T ss_pred ----------------------------------------------------------CCCeEEecccccchhccCCccc
Confidence 12357999999886544321
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....|+..|+|||.+....++.++|+|||||+++++++|..||...+ . ...+.+.....
T Consensus 159 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~---~~~~~~~~~~~----------- 218 (257)
T cd08225 159 AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------L---HQLVLKICQGY----------- 218 (257)
T ss_pred ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------H---HHHHHHHhccc-----------
Confidence 22357889999999988888999999999999999999999996432 1 11111111000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
........+..+.++|.+||+.+|++|||+.++++||||
T Consensus 219 ---------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 ---------------------------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ---------------------------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 001122345689999999999999999999999999997
No 235
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.7e-36 Score=288.44 Aligned_cols=246 Identities=18% Similarity=0.297 Sum_probs=191.1
Q ss_pred CCceEEEEeecccCceEEEEEEeC---CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT---RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
..+|++.+.||+|+||.||+|.+. ..+..||+|.++... .....+.+|+.+++.+ .|+||+++++.+..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~ 77 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF------DHSNIVRLEGVITR 77 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEec
Confidence 468999999999999999999764 446789999877542 3345678899999888 78999999998874
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
+...++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||++
T Consensus 78 ----~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili----------- 140 (266)
T cd05064 78 ----GNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLV----------- 140 (266)
T ss_pred ----CCCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEE-----------
Confidence 46899999999 778887776432 3588999999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+.+..++++|||.+.....
T Consensus 141 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 141 -------------------------------------------------------------NSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred -------------------------------------------------------------cCCCcEEECCCcccccccc
Confidence 3356789999998754321
Q ss_pred cc--c--cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 269 QF--A--EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 269 ~~--~--~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.. . ...++..|+|||.+.+..++.++|||||||++|++++ |..||...+ .......+.+ .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~------~~~~~~~~~~---~------ 224 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS------GQDVIKAVED---G------ 224 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC------HHHHHHHHHC---C------
Confidence 11 1 1234578999999998899999999999999999775 999997542 1111111100 0
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.+++.+||+.+|++|||++++++
T Consensus 225 --------------------------------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 225 --------------------------------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred --------------------------------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 001123345668899999999999999999999875
No 236
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.3e-36 Score=300.33 Aligned_cols=285 Identities=21% Similarity=0.315 Sum_probs=194.8
Q ss_pred Eeeccc--CceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWG--QFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G--~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
++||.| +||+||+|++..+++.||+|+..... ...+.+.+|+.+++.+ +|+||++++++|.. +..
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l------~h~niv~~~~~~~~----~~~ 73 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF------RHPNIMTSWTVFTT----GSW 73 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCcceEeeeEec----CCc
Confidence 456666 89999999999999999999876432 2345778888888888 88999999999885 368
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.++||||+ ++++.+++.......+++..+..++.|++.||+|||++ ||+||||||+||++.
T Consensus 74 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~----------------- 135 (328)
T cd08226 74 LWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILIS----------------- 135 (328)
T ss_pred eEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEe-----------------
Confidence 99999999 78898888765445688999999999999999999996 999999999999993
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---c---
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---Q--- 269 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---~--- 269 (447)
....++++||+.+..... .
T Consensus 136 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 136 -------------------------------------------------------GDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred -------------------------------------------------------CCCcEEEechHHHhhhhccCccccc
Confidence 345688888875432211 0
Q ss_pred ----cccCCCCCCccChHHhhcC--CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCC-HHh
Q 013220 270 ----FAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP-RKI 342 (447)
Q Consensus 270 ----~~~~~gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 342 (447)
.....++..|+|||++.+. .++.++|||||||++|+|++|..||...+. . ......+...+ ..+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~------~---~~~~~~~~~~~~~~~ 231 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLR------T---QMLLQKLKGPPYSPL 231 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcCh------H---HHHHHHhcCCCCCCc
Confidence 0111345679999999764 478999999999999999999999975431 1 11222221111 110
Q ss_pred hhC--CCCccchhcccchh-----hhhhhcccCchhHHhh--hhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 343 AIG--GAQSKDYFDRHGDL-----KRIRRLKFWSLDRLLV--DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 343 ~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
... .............. ........ ...... .........+..+.+||++||+.||++|||++|+|+||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGM--TQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhcccc--ccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 000 00000000000000 00000000 000000 01112334677899999999999999999999999999
Q ss_pred ccccccC
Q 013220 414 WLSLRNS 420 (447)
Q Consensus 414 ~f~~~~~ 420 (447)
||+....
T Consensus 310 ~~~~~~~ 316 (328)
T cd08226 310 FFKQVKE 316 (328)
T ss_pred HHHHHHH
Confidence 9987543
No 237
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=7.8e-36 Score=286.84 Aligned_cols=245 Identities=25% Similarity=0.375 Sum_probs=192.5
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.++|++.++||+|+||+||+|++..+ ..||+|.++........+.+|+++++.+ +|++|+++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l------~~~~i~~~~~~~~~----- 72 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKL------RHEKLVQLYAVVSE----- 72 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhC------CCCCcceEEEEECC-----
Confidence 47899999999999999999987655 4599998876544456788999999998 78899999887643
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|.+.+.......+++..+..++.|++.||+|||+. +|+|+||||+||++.
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~--------------- 136 (262)
T cd05071 73 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVG--------------- 136 (262)
T ss_pred CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEc---------------
Confidence 4579999999 78998888654444578899999999999999999996 999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc--
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-- 271 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~-- 271 (447)
....++|+|||.+........
T Consensus 137 ---------------------------------------------------------~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 137 ---------------------------------------------------------ENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred ---------------------------------------------------------CCCcEEeccCCceeecccccccc
Confidence 356799999999865443221
Q ss_pred --cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 272 --EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 272 --~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
...++..|+|||...+..++.++|+|||||++|+|++ |..||.... .......+. ...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~------~~~~~~~~~---~~~---------- 220 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVE---RGY---------- 220 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------hHHHHHHHh---cCC----------
Confidence 1235678999999988889999999999999999999 888886542 111111110 000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+++.+||+.||++|||++++++
T Consensus 221 ----------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 221 ----------------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred ----------------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 00122344668899999999999999999999874
No 238
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.6e-36 Score=290.08 Aligned_cols=254 Identities=26% Similarity=0.439 Sum_probs=200.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.|++.+.||.|+||.||+|.+..++..||+|++... ......+.+|+++++.+.+. .|++|+++++++.. +
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~---~~~~vi~~~~~~~~----~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQS---QPPNITKYYGSYLK----G 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccC---CCCCeeeEeeeeee----C
Confidence 488899999999999999999999999999987643 23345688899999999542 58999999998864 4
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|.+++.. ..+++..+..++.|++.||.|||+. ||+|+||+|+||++.
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~--------------- 135 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVT--------------- 135 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEc---------------
Confidence 6899999999 8888887754 2588999999999999999999996 999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
....++|+|||.+...... .
T Consensus 136 ---------------------------------------------------------~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 136 ---------------------------------------------------------NTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred ---------------------------------------------------------CCCCEEEccCCceeecCCCcccc
Confidence 3567999999998654432 2
Q ss_pred ccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....|+..|+|||.+.+. .++.++|+|||||++|+|++|..||...... ..+..+....+.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---------~~~~~~~~~~~~--------- 220 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF---------RAMMLIPKSKPP--------- 220 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh---------hhhhccccCCCC---------
Confidence 234688899999998754 5689999999999999999999999654210 000000000000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCCh-hhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE-TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
.++. ..+.++.+|+.+||+.||++|||+.+++.||||+....
T Consensus 221 -----------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~ 263 (277)
T cd06917 221 -----------------------------RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSK 263 (277)
T ss_pred -----------------------------CCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcccc
Confidence 0111 13568889999999999999999999999999987654
No 239
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=9.9e-36 Score=284.79 Aligned_cols=254 Identities=30% Similarity=0.487 Sum_probs=206.0
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+|.+.+.||.|++|.||+|++..+++.|++|.+.... .....+.+|++.+..+ .|++|+++++.+...
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~---- 71 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC------ESPYVVKCYGAFYKE---- 71 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc------CCCCeeeEEEEEccC----
Confidence 6899999999999999999999999999999876543 3456788999999999 688999999998754
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-hCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR-ELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+ . |++|+||+|+||++
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~--------------- 133 (264)
T cd06623 72 GEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLI--------------- 133 (264)
T ss_pred CeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEE---------------
Confidence 7899999999 78999888654 458999999999999999999999 8 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA- 271 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~- 271 (447)
+....++|+|||.+........
T Consensus 134 ---------------------------------------------------------~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 134 ---------------------------------------------------------NSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred ---------------------------------------------------------CCCCCEEEccCccceecccCCCc
Confidence 3456799999999875543222
Q ss_pred --cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 272 --EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 272 --~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
...++..|+|||.+....++.++|+||||+++|+|++|..||..... ....+....+.....
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~------~~~~~~~~~~~~~~~---------- 220 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ------PSFFELMQAICDGPP---------- 220 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc------cCHHHHHHHHhcCCC----------
Confidence 34578899999999888889999999999999999999999966531 011111111111000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChh-hHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
...+.. .+..+.++|.+||..+|++|||+.++++||||+..+
T Consensus 221 ----------------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 221 ----------------------------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred ----------------------------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 112223 567899999999999999999999999999997643
No 240
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.7e-36 Score=286.26 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=189.6
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHHh----HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF----AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||.|+||.||+|.+..+++.||+|++...... ...+..|..++.... .|+||+++++++.. +...
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~----~~~~ 72 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQG-----ESPYVAKLYYSFQS----KDYL 72 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcC-----CCCCeeeeeeeEEc----CCeE
Confidence 5689999999999999989999999988654321 123344444443332 78999999999874 4689
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
|+||||+ +++|.+++... ..+++..+..++.|++.||.|||+. ||+|+||+|+||++
T Consensus 73 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~------------------- 130 (260)
T cd05611 73 YLVMEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLI------------------- 130 (260)
T ss_pred EEEEeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEE-------------------
Confidence 9999999 88999888654 3588999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccCCCC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT 276 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~gt 276 (447)
+....++|+|||++..... .....++
T Consensus 131 -----------------------------------------------------~~~~~~~l~dfg~~~~~~~-~~~~~~~ 156 (260)
T cd05611 131 -----------------------------------------------------DQTGHLKLTDFGLSRNGLE-NKKFVGT 156 (260)
T ss_pred -----------------------------------------------------CCCCcEEEeecccceeccc-cccCCCC
Confidence 3356799999998865332 2344678
Q ss_pred CCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhccc
Q 013220 277 RQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 356 (447)
Q Consensus 277 ~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 356 (447)
..|+|||.+.+..++.++|+||||+++|+|++|..||...+ .......+.......
T Consensus 157 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~------------------ 212 (260)
T cd05611 157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET------PDAVFDNILSRRINW------------------ 212 (260)
T ss_pred cCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcccCC------------------
Confidence 89999999988888999999999999999999999996542 111111111000000
Q ss_pred chhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh---HHHhcCcccccc
Q 013220 357 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA---QQCLQHPWLSLR 418 (447)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta---~elL~hp~f~~~ 418 (447)
........+..+.++|.+||+.||++|||+ +|+|+||||+..
T Consensus 213 --------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 213 --------------------PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred --------------------CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 000112346788999999999999999955 799999999753
No 241
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.6e-35 Score=281.17 Aligned_cols=251 Identities=33% Similarity=0.485 Sum_probs=205.1
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.+.||+|++|.||+|.+..++..|++|++.... ...+.+.+|+++++.+ +|++|+++++.+... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~--~ 72 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL------QHPNIVRYYGSERDE--E 72 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc------CCCCEeeEEEEEecC--C
Confidence 4889999999999999999999899999999877654 3467888999999999 789999999988753 1
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
....+++|||+ +++|.+.+.... .+++..+..++.|++.||+|||+. |++|+|++|+||++
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i--------------- 134 (260)
T cd06606 73 KNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILV--------------- 134 (260)
T ss_pred CCeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEE---------------
Confidence 36899999999 888988876543 689999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--- 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--- 269 (447)
.....++|+|||.+......
T Consensus 135 ---------------------------------------------------------~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 135 ---------------------------------------------------------DSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred ---------------------------------------------------------cCCCCEEEcccccEEeccccccc
Confidence 33567999999998765433
Q ss_pred --cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 --FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 --~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+ .....+..+..
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~----------- 218 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG--------NPMAALYKIGS----------- 218 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------chHHHHHhccc-----------
Confidence 234567899999999988889999999999999999999999997542 11111111110
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
......++...+..+.+||.+||+.||++||++.|++.||||
T Consensus 219 --------------------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 --------------------------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred --------------------------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 001112334446789999999999999999999999999997
No 242
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.1e-36 Score=304.34 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=190.4
Q ss_pred CceEEEEeecccCceEEEEEEeCC-----CCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTR-----TSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
++|++.+.||+|+||.||+|++.. ++..||+|+++... .....+.+|+++++.+. .|+||+++++++.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-----~h~nIv~~~~~~~ 112 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-----QHKNIVNLLGACT 112 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-----cCCceeeEeeEec
Confidence 579999999999999999998643 34579999886532 33456888999999885 6899999999887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhc---------------------------------------------------
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSR--------------------------------------------------- 136 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--------------------------------------------------- 136 (447)
.. ...++||||| +++|.+++....
T Consensus 113 ~~----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 113 HG----GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred CC----CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 53 6899999999 889988875321
Q ss_pred -----------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCC
Q 013220 137 -----------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERP 199 (447)
Q Consensus 137 -----------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~ 199 (447)
...+++..+..++.||+.||+|||++ ||+||||||+||+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~--------------------- 246 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLT--------------------- 246 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEe---------------------
Confidence 11367788899999999999999996 999999999999993
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-----cCC
Q 013220 200 EGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EEI 274 (447)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~-----~~~ 274 (447)
....++|+|||++........ ...
T Consensus 247 ---------------------------------------------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 247 ---------------------------------------------------DGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred ---------------------------------------------------CCCeEEEeeceeeeeccCCcceeeccCCC
Confidence 345799999999865432211 122
Q ss_pred CCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 275 QTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 275 gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
++..|+|||++.+..++.++|||||||++|+|++ |..||..... ......+... +
T Consensus 276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~------~~~~~~~~~~-~----------------- 331 (374)
T cd05106 276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV------NSKFYKMVKR-G----------------- 331 (374)
T ss_pred CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc------cHHHHHHHHc-c-----------------
Confidence 4567999999988889999999999999999997 9999975421 1111111100 0
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+.++.++|.+||+.||++|||+.++++
T Consensus 332 ----------------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 332 ----------------------YQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ----------------------cCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 000112233568999999999999999999999975
No 243
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-36 Score=294.61 Aligned_cols=254 Identities=31% Similarity=0.457 Sum_probs=201.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
..|+..+.||+|+||.||+|.+..++..||+|.+... ....+.+.+|+++++.+ +|+||+++++.+..
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~---- 73 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYITRYYGSYLK---- 73 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC------CCCccHhhhccccc----
Confidence 3577788899999999999999889999999987643 23345788999999998 88999999998874
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...++||||+ +++|.+.+.. ..+++..+..++.|++.||.|||++ |++|+||+|+||++.
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~-------------- 135 (277)
T cd06642 74 GTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLS-------------- 135 (277)
T ss_pred CCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEe--------------
Confidence 46899999999 7788877743 3478899999999999999999997 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-- 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-- 270 (447)
....++|+|||++.......
T Consensus 136 ----------------------------------------------------------~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 136 ----------------------------------------------------------EQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred ----------------------------------------------------------CCCCEEEccccccccccCcchh
Confidence 34569999999986544321
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... .. ...+....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------~~---~~~~~~~~----------- 217 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM------RV---LFLIPKNS----------- 217 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh------hH---HhhhhcCC-----------
Confidence 2235788999999998888999999999999999999999998643210 00 00000000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~ 422 (447)
.+..+...+..+.++|.+||+.+|++|||+.++++||||......+
T Consensus 218 ---------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 263 (277)
T cd06642 218 ---------------------------PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKT 263 (277)
T ss_pred ---------------------------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhhH
Confidence 0012223456788999999999999999999999999998655433
No 244
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.5e-35 Score=284.77 Aligned_cols=250 Identities=26% Similarity=0.371 Sum_probs=195.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEech----hHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS----AAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||+|+||.||+|++..++..||+|.++. +......+.+|+++++.+ +|+||+++++.+...
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~- 74 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL------NHPNVIKYLDSFIED- 74 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC------CCcceeeeeeeEEEC-
Confidence 579999999999999999999999999999997643 233345678899999999 789999999988753
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
...+++|||+ +++|.+++.... ...+++..+..++.|++.||+|||++ ||+|+||||+||+++
T Consensus 75 ---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~---------- 140 (267)
T cd08228 75 ---NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFIT---------- 140 (267)
T ss_pred ---CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEc----------
Confidence 6899999999 778888775422 23478889999999999999999997 999999999999993
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
....++|+|||.+.....
T Consensus 141 --------------------------------------------------------------~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 141 --------------------------------------------------------------ATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred --------------------------------------------------------------CCCCEEECccccceeccc
Confidence 345699999998865442
Q ss_pred c---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 269 Q---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 269 ~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
. .....++..|+|||.+.+..++.++|+|||||++|+|++|..||..... +...........+..+
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~------ 227 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLFSLCQKIEQCDYPP------ 227 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-----cHHHHHHHHhcCCCCC------
Confidence 2 1234678899999999888889999999999999999999999965421 1111111111000000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
......+..+.+++.+||+.+|++||++.++++.
T Consensus 228 ---------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 228 ---------------------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred ---------------------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 0112345678999999999999999999999864
No 245
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4e-36 Score=299.70 Aligned_cols=288 Identities=33% Similarity=0.510 Sum_probs=214.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|++.+.||+|+||.||+|.+..++..||+|.+... ......+.+|+.+++.+. +|+||+++++++...
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~ni~~~~~~~~~~-- 79 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHPNIVKLLNVIKAE-- 79 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc-----CCCCccceeeeeccC--
Confidence 7899999999999999999999889999999976432 233445778999999884 688999999987653
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
++...++||||++++|...+... .+++..+..++.||+.||+|||++ ||+|+||||+||++
T Consensus 80 ~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill--------------- 140 (337)
T cd07852 80 NDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILL--------------- 140 (337)
T ss_pred CCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE---------------
Confidence 34578999999987888877543 478888899999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc----
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---- 268 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~---- 268 (447)
+..+.++|+|||.+.....
T Consensus 141 ---------------------------------------------------------~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 141 ---------------------------------------------------------NSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred ---------------------------------------------------------cCCCcEEEeeccchhcccccccc
Confidence 4467899999998864422
Q ss_pred ----ccccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 269 ----QFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 269 ----~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
......++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...+ .......+....+..+....
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS------TLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHH
Confidence 1223468889999998865 457889999999999999999999997653 44455556665555543321
Q ss_pred hCCCC--ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 344 IGGAQ--SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 344 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
..... ....+. .+......... ......+.++.+||.+||+.||++|||+.++++||||+.....
T Consensus 238 ~~~~~~~~~~~~~------~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 238 ESIKSPFAATMLD------SLPSRPRKPLD-------ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred HHHHhhhHHHhhh------hcccccccchh-------hhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 11000 000000 00000000000 0112256789999999999999999999999999999987655
Q ss_pred cccc
Q 013220 422 RDET 425 (447)
Q Consensus 422 ~~~~ 425 (447)
..+.
T Consensus 305 ~~~~ 308 (337)
T cd07852 305 SDEP 308 (337)
T ss_pred CCCC
Confidence 4443
No 246
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.5e-35 Score=284.83 Aligned_cols=250 Identities=27% Similarity=0.434 Sum_probs=199.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
.+|.+.+.||+|+||.||+|++..++..||+|.+... ......+.+|+++++.+ .|++|+++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l------~h~~i~~~~~~~~~ 75 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL------RHDRIVQYYGCLRD 75 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc------CCCCcceEEEEEEc
Confidence 3699999999999999999999999999999976422 23345788899999999 78899999998765
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. .+..++++|||+ +++|.+.+... ..+++..+..++.|++.||.|||+. |++|+||||+||++
T Consensus 76 ~--~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i----------- 139 (264)
T cd06653 76 P--EEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILR----------- 139 (264)
T ss_pred C--CCCEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEE-----------
Confidence 3 345789999999 78898887643 3478899999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||++.....
T Consensus 140 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 140 -------------------------------------------------------------DSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred -------------------------------------------------------------cCCCCEEECcccccccccc
Confidence 3345689999999865432
Q ss_pred ------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 269 ------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 269 ------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
......++..|+|||.+.+..++.++|+|||||++|+|++|+.||.... ....+.+......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~~--- 226 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE---------AMAAIFKIATQPT--- 226 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC---------HHHHHHHHHcCCC---
Confidence 1123467889999999988888999999999999999999999996431 1222222221111
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...++...++.+.++|.+||+ +|.+|||+.++++|||+
T Consensus 227 ----------------------------------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 227 ----------------------------------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ----------------------------------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 112455667889999999999 57999999999999995
No 247
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=310.96 Aligned_cols=247 Identities=30% Similarity=0.438 Sum_probs=204.9
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.+.|.+...+|.|+|+.|-.|.+..+++.+++|++... .....+|+.++.... +|+||+++.+.+.+ +
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~-----~h~niv~~~~v~~~----~ 388 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVR-----DHPNIVKSHDVYED----G 388 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhc-----CCCcceeecceecC----C
Confidence 36799999999999999999999999999999998876 335667888888876 89999999999985 4
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
.+.|+|||.+ |+.+.+-+.... ....++..|+++|+.|+.|||++ |+||||+||+|||+.
T Consensus 389 ~~~~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~--------------- 449 (612)
T KOG0603|consen 389 KEIYLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLD--------------- 449 (612)
T ss_pred ceeeeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeec---------------
Confidence 7999999999 776666654332 23377888999999999999997 999999999999992
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccC
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE 273 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 273 (447)
....+++|+|||+++.........
T Consensus 450 --------------------------------------------------------~~~g~lrltyFG~a~~~~~~~~tp 473 (612)
T KOG0603|consen 450 --------------------------------------------------------GSAGHLRLTYFGFWSELERSCDTP 473 (612)
T ss_pred --------------------------------------------------------CCCCcEEEEEechhhhCchhhccc
Confidence 125679999999998766554455
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
+-|..|.|||++....|+.++|+||||++||+|++|+.||...+.. ..++..++..+
T Consensus 474 ~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---------~ei~~~i~~~~-------------- 530 (612)
T KOG0603|consen 474 ALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---------IEIHTRIQMPK-------------- 530 (612)
T ss_pred chhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---------HHHHHhhcCCc--------------
Confidence 6789999999999999999999999999999999999999866421 22222222221
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
+...+++++++||.+||+.||.+|+++++++.||||.+
T Consensus 531 --------------------------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~ 568 (612)
T KOG0603|consen 531 --------------------------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLS 568 (612)
T ss_pred --------------------------cccccCHHHHHHHHHhccCChhhCcChhhhccCcchhc
Confidence 23567889999999999999999999999999999943
No 248
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.1e-35 Score=288.66 Aligned_cols=250 Identities=25% Similarity=0.382 Sum_probs=193.2
Q ss_pred eecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEE
Q 013220 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLC 118 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~ 118 (447)
.||+|+||.||+|++..+++.||+|.+.... ........|..+++.+... +|++|+++++.+... +..+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~----~~~~ 73 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG---DCPFIVCMSYAFHTP----DKLS 73 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC---CCCcEeeeeeeeecC----CEEE
Confidence 3799999999999999999999999875432 1122345565555555432 789999999988853 6899
Q ss_pred EEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcC
Q 013220 119 MVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILE 197 (447)
Q Consensus 119 lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~ 197 (447)
+||||+ |++|...+... ..+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 74 ~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili-------------------- 130 (278)
T cd05606 74 FILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILL-------------------- 130 (278)
T ss_pred EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEE--------------------
Confidence 999999 88888777543 4589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-cccCCCC
Q 013220 198 RPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAEEIQT 276 (447)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~gt 276 (447)
+.+..++|+|||.+...... .....|+
T Consensus 131 ----------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 131 ----------------------------------------------------DEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred ----------------------------------------------------CCCCCEEEccCcCccccCccCCcCcCCC
Confidence 33567999999998654322 2335789
Q ss_pred CCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcc
Q 013220 277 RQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 355 (447)
Q Consensus 277 ~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (447)
..|+|||.+.+. .++.++||||+||++|+|++|..||....... ..... .
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~----~~~~~---~---------------------- 209 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEID---R---------------------- 209 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc----hHHHH---H----------------------
Confidence 999999999754 68899999999999999999999997652110 00000 0
Q ss_pred cchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCccccccc
Q 013220 356 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN 419 (447)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~ 419 (447)
........++...+..+.++|.+||..+|.+|| ++.++++||||+...
T Consensus 210 ----------------~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 210 ----------------MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred ----------------HhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 000111223444567899999999999999999 999999999998765
No 249
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-35 Score=287.06 Aligned_cols=251 Identities=22% Similarity=0.341 Sum_probs=195.2
Q ss_pred CCceEEEEeecccCceEEEEEEeCC-----CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTR-----TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.+.||+|+||.||+|.+.. ++..|++|..... ......+.+|+.+++.+ +|+||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~ 78 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF------NHQNIVRLIGVS 78 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC------CCCCEeeEEEEE
Confidence 4689999999999999999998876 7789999977643 23345688899999999 789999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY-----KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTI 181 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~-----~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~ 181 (447)
... ...++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++ +++|+||||+||++...
T Consensus 79 ~~~----~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~- 152 (277)
T cd05036 79 FER----LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCK- 152 (277)
T ss_pred ccC----CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEecc-
Confidence 754 5689999999 8899998865431 2478889999999999999999996 99999999999999531
Q ss_pred CCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecC
Q 013220 182 DPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFG 261 (447)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg 261 (447)
.....++|+|||
T Consensus 153 --------------------------------------------------------------------~~~~~~kl~dfg 164 (277)
T cd05036 153 --------------------------------------------------------------------GPGRVAKIADFG 164 (277)
T ss_pred --------------------------------------------------------------------CCCcceEeccCc
Confidence 113458999999
Q ss_pred ccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHh
Q 013220 262 NACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELI 335 (447)
Q Consensus 262 ~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
.+....... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||...+ ....+..+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~------~~~~~~~~~--- 235 (277)
T cd05036 165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT------NQEVMEFVT--- 235 (277)
T ss_pred cccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHH---
Confidence 987543221 11223567999999998889999999999999999996 999997543 111111110
Q ss_pred CCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 336 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
+.. ....+...+..+.+|+.+||+.+|++|||+.++|+|
T Consensus 236 ~~~--------------------------------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 236 GGG--------------------------------------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred cCC--------------------------------------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 000 011233446688899999999999999999999986
No 250
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.8e-36 Score=286.00 Aligned_cols=242 Identities=31% Similarity=0.481 Sum_probs=194.3
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||.|+||.||+|.+..+++.+++|++.... .....+.+|+++++.+ .|+||+++++.+.. +...|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~----~~~~~l 70 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA------QSPYVVKLYYSFQG----KKNLYL 70 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC------CCcchhHHHHheec----CcEEEE
Confidence 689999999999999889999999886543 2455788899999998 78999999988764 478999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
+|||+ +++|.+++.... .+++..+..++.||+.||+|||+. |++|+||+|+||++
T Consensus 71 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~--------------------- 126 (265)
T cd05579 71 VMEYLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILI--------------------- 126 (265)
T ss_pred EEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEE---------------------
Confidence 99999 789988886533 589999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---------
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--------- 269 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--------- 269 (447)
+....++|+|||++......
T Consensus 127 ---------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 127 ---------------------------------------------------DSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred ---------------------------------------------------cCCCCEEEEecccchhcccCccccccccc
Confidence 34567999999988643322
Q ss_pred --cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 --FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 --~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||.+.+..++.++|+||||+++|++++|..||.... .......+..
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~-------------- 215 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET------PEEIFQNILN-------------- 215 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhc--------------
Confidence 123357889999999988888999999999999999999999996542 1111111100
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChh--hHHHHHHHHhhccccCCCCCCCh---HHHhcCcccccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET--DAREFAEFLVPLLDFTPEKRPTA---QQCLQHPWLSLR 418 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ll~~~L~~dP~kRpta---~elL~hp~f~~~ 418 (447)
.....+.. .+..+.+|+.+||+.+|++|||+ .++|+||||+..
T Consensus 216 ----------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 216 ----------------------------GKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred ----------------------------CCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 00011111 26688999999999999999999 999999999864
No 251
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-35 Score=284.63 Aligned_cols=246 Identities=25% Similarity=0.404 Sum_probs=194.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.++|++.++||+|+||.||+|.+. ++..||+|.+.......+.+.+|+.+++.+ +|+||+++++.+.. .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~----~ 73 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTL------QHDKLVRLYAVVTK----E 73 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhC------CCCCeeeEEEEEcC----C
Confidence 468999999999999999999864 556799998776555567889999999999 78999999988764 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...+++|||+ +++|.+++.......+++..+..++.|++.||+|||+. +++|+||||+||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili---------------- 136 (261)
T cd05072 74 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLV---------------- 136 (261)
T ss_pred CCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEe----------------
Confidence 6789999999 88999988655445588889999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc---
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--- 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--- 270 (447)
+....++|+|||.+.......
T Consensus 137 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 137 --------------------------------------------------------SESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred --------------------------------------------------------cCCCcEEECCCccceecCCCceec
Confidence 335679999999997544221
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... .......+ ....+
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~---~~~~~--------- 222 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS------NSDVMSAL---QRGYR--------- 222 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC------HHHHHHHH---HcCCC---------
Confidence 12234678999999988888999999999999999998 999996542 11111111 10000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.......+.++.+++.+||+.+|++|||++++++
T Consensus 223 -----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 223 -----------------------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -----------------------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0111234568899999999999999999999864
No 252
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-35 Score=290.02 Aligned_cols=261 Identities=22% Similarity=0.359 Sum_probs=199.9
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.+.|++.+.||+|+||.||+|.+..++..||+|.++... .....+..|++++.... +|+||+++++++..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~--- 85 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVKCYGYFIT--- 85 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc-----CCCchHhhheeeec---
Confidence 478999999999999999999999889999999886432 23345666777666653 69999999999875
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...+++|||+++.+.+++.... ..+++..+..++.|++.||+|||+..||+||||+|+||++
T Consensus 86 -~~~~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill--------------- 148 (296)
T cd06618 86 -DSDVFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL--------------- 148 (296)
T ss_pred -CCeEEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---------------
Confidence 36899999999878887775533 3688899999999999999999973499999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--c
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--F 270 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~ 270 (447)
+....++|+|||.+...... .
T Consensus 149 ---------------------------------------------------------~~~~~~kL~dfg~~~~~~~~~~~ 171 (296)
T cd06618 149 ---------------------------------------------------------DASGNVKLCDFGISGRLVDSKAK 171 (296)
T ss_pred ---------------------------------------------------------cCCCCEEECccccchhccCCCcc
Confidence 33567999999998654322 2
Q ss_pred ccCCCCCCccChHHhhcCC----CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCC
Q 013220 271 AEEIQTRQYRAPEVILRAG----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 346 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~----~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (447)
....++..|+|||.+.+.. ++.++|+|||||++|+|++|..||.... . ..+.+..........
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~--~~~~~~~~~~~~~~~----- 238 (296)
T cd06618 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK------T--EFEVLTKILQEEPPS----- 238 (296)
T ss_pred cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch------h--HHHHHHHHhcCCCCC-----
Confidence 2335778999999997553 7889999999999999999999996431 0 111111111110000
Q ss_pred CCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 347 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
.......+.++.+||.+||+.||.+|||++++++||||+.....
T Consensus 239 -------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 282 (296)
T cd06618 239 -------------------------------LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETA 282 (296)
T ss_pred -------------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchh
Confidence 00011235688999999999999999999999999999975543
No 253
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9e-36 Score=294.48 Aligned_cols=249 Identities=20% Similarity=0.314 Sum_probs=193.3
Q ss_pred cccCCceEEEEeecccCceEEEEEEeCCCCe----EEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSS----YVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 32 ~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
++...+|++.+.||+|+||+||+|++..++. .||+|+++.. ....+.+.+|+.+++.+ .|+||+++++
T Consensus 3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~g 76 (316)
T cd05108 3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DNPHVCRLLG 76 (316)
T ss_pred ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCCCeEEE
Confidence 3456789999999999999999998765554 4899987633 34456788899999999 8899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
++... ..++++||+ +++|.+.+.... ..++...+..++.||+.||+|||++ ||+||||||+||++
T Consensus 77 ~~~~~-----~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill------- 142 (316)
T cd05108 77 ICLTS-----TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLV------- 142 (316)
T ss_pred EEcCC-----CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEe-------
Confidence 88642 467999999 889998886533 3478888999999999999999996 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
.....++|+|||++.
T Consensus 143 -----------------------------------------------------------------~~~~~~kl~DfG~a~ 157 (316)
T cd05108 143 -----------------------------------------------------------------KTPQHVKITDFGLAK 157 (316)
T ss_pred -----------------------------------------------------------------cCCCcEEEccccccc
Confidence 335679999999997
Q ss_pred ccccccc-----cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 265 RANKQFA-----EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 265 ~~~~~~~-----~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
....... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+ ...+..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~-- 228 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-------ASEISSILEKGE-- 228 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHhCCC--
Confidence 5542211 1123567999999998889999999999999999997 999986542 111111111000
Q ss_pred CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+..+.+++.+||..||++|||+.+++.+
T Consensus 229 --------------------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 229 --------------------------------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred --------------------------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 001122334578899999999999999999999976
No 254
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.5e-36 Score=302.13 Aligned_cols=250 Identities=26% Similarity=0.375 Sum_probs=191.3
Q ss_pred CCceEEEEeecccCceEEEEEEe-----CCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYD-----TRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.++||+|+||+||+|++ ..++..||+|+++... ...+.+.+|+++++.+. .|+||+++++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-----~HpnIv~l~~~~ 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHINIVNLLGAC 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-----CCcceeeeeeee
Confidence 35899999999999999999964 3457789999886432 33457888999999985 689999999988
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhcc-------------------------------------------------
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY------------------------------------------------- 137 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~------------------------------------------------- 137 (447)
.. +...++||||| +++|.+++.....
T Consensus 109 ~~----~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 109 TV----GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred cc----CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 75 36799999999 8899888754210
Q ss_pred ------------------------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 138 ------------------------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 138 ------------------------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
..+++..+..++.||+.||+|||++ ||+||||||+||++.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~--------------- 248 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLT--------------- 248 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEE---------------
Confidence 1367778899999999999999996 999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc--
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-- 271 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~-- 271 (447)
....++|+|||++........
T Consensus 249 ---------------------------------------------------------~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 249 ---------------------------------------------------------HGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred ---------------------------------------------------------CCCcEEEecCccceeccCccccc
Confidence 345699999999865432211
Q ss_pred ---cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 272 ---EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 272 ---~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
...++..|+|||.+.+..++.++|||||||++|+|++ |..||..... +......+.. +.
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-----~~~~~~~~~~--~~---------- 334 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-----DSKFYKMIKE--GY---------- 334 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-----hHHHHHHHHh--Cc----------
Confidence 1234567999999999899999999999999999997 8889865421 1111110000 00
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+.++.+||.+||+.||++|||++|+++.
T Consensus 335 -----------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 335 -----------------------------RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred -----------------------------cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 000122235688999999999999999999999864
No 255
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.3e-35 Score=287.54 Aligned_cols=250 Identities=30% Similarity=0.440 Sum_probs=199.4
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
=|++.++||.|+||.||+|.+..++..||+|+.... ......+.+|+++++.+ +|+||+++++.+.. +
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~----~ 74 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYVTKYYGSYLK----D 74 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc------CCCCEeEEEEEEEe----C
Confidence 378889999999999999999889999999986533 23345788899999998 78999999999874 4
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|...+.. ..++...+..++.|++.|+.+||++ |++|+||+|+||++
T Consensus 75 ~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i---------------- 134 (277)
T cd06641 75 TKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLL---------------- 134 (277)
T ss_pred CeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEE----------------
Confidence 6899999999 7788877753 3488999999999999999999997 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
+....++|+|||++...... .
T Consensus 135 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06641 135 --------------------------------------------------------SEHGEVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred --------------------------------------------------------CCCCCEEEeecccceecccchhhh
Confidence 33567999999988654332 1
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....++..|+|||.+....++.++|+|||||++|+|++|..||.... ... ....+....
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~------~~~---~~~~~~~~~------------ 217 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH------PMK---VLFLIPKNN------------ 217 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc------hHH---HHHHHhcCC------------
Confidence 22357889999999988888999999999999999999999996432 000 000000000
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
....+...+.++.++|.+||+.+|.+||++.++++||||...-
T Consensus 218 --------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 218 --------------------------PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred --------------------------CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 0012234466889999999999999999999999999998643
No 256
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.7e-35 Score=290.26 Aligned_cols=278 Identities=23% Similarity=0.285 Sum_probs=194.7
Q ss_pred CceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc
Q 013220 48 QFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL 124 (447)
Q Consensus 48 ~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~ 124 (447)
+++.||.+++..+++.||+|++... ......+..|+++++.+ .|+||++++++|... ...+++|||+
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l------~h~~i~~~~~~~~~~----~~~~~~~e~~ 81 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL------QHPNILPYVTSFIVD----SELYVVSPLM 81 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc------CCcchhhhhheeecC----CeEEEEEecc
Confidence 4456666666778999999987644 34456789999999999 789999999998753 6899999999
Q ss_pred -cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCC
Q 013220 125 -GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSI 203 (447)
Q Consensus 125 -~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (447)
++++.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~------------------------- 135 (314)
T cd08216 82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLS------------------------- 135 (314)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEe-------------------------
Confidence 78888888755445688999999999999999999997 999999999999994
Q ss_pred CCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc----------cccC
Q 013220 204 NGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----------FAEE 273 (447)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~----------~~~~ 273 (447)
....++++||+.+...... ....
T Consensus 136 -----------------------------------------------~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~ 168 (314)
T cd08216 136 -----------------------------------------------GDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSS 168 (314)
T ss_pred -----------------------------------------------cCCceEEecCccceeeccccccccccccccccc
Confidence 3567999999988543211 1223
Q ss_pred CCCCCccChHHhhcC--CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 274 IQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
.++..|+|||++... .++.++|+||+||++|+|++|..||...+. . ........+..+..+......
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~------~--~~~~~~~~~~~~~~~~~~~~~--- 237 (314)
T cd08216 169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPA------T--QMLLEKVRGTVPCLLDKSTYP--- 237 (314)
T ss_pred cccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH------H--HHHHHHHhccCccccccCchh---
Confidence 467789999999763 578999999999999999999999975421 1 111122223322211000000
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~ 422 (447)
.......... ....................+.++.+|+.+||+.||++|||++|+|+||||+..+...
T Consensus 238 --~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~~ 305 (314)
T cd08216 238 --LYEDSMSQSR-SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRN 305 (314)
T ss_pred --hhcCCcCccc-ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcccc
Confidence 0000000000 0000000011111123445577899999999999999999999999999999766333
No 257
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.4e-35 Score=284.27 Aligned_cols=245 Identities=24% Similarity=0.416 Sum_probs=194.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.++|++.++||+|+||.||+|... +++.||+|.+.........+.+|+++++.+ +|+||+++++.+..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~----- 72 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQL------QHPRLVRLYAVVTQ----- 72 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhc------CCcCeeeEEEEEcc-----
Confidence 478999999999999999999854 567899998887665567888999999999 78899999987643
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...+++|||+ +++|.+.+.......++...+..++.|++.||+|||+. |++|+||||+||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i---------------- 135 (260)
T cd05067 73 EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILV---------------- 135 (260)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEE----------------
Confidence 4689999999 88999888654445688899999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-c--
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-F-- 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-~-- 270 (447)
+....++|+|||.+...... .
T Consensus 136 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 136 --------------------------------------------------------SETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred --------------------------------------------------------cCCCCEEEccCcceeecCCCCccc
Confidence 33567999999998655421 1
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....++..|+|||.+....++.++|||||||++|++++ |..||...+ .......+.. ..
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~---~~---------- 220 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT------NPEVIQNLER---GY---------- 220 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC------hHHHHHHHHc---CC----------
Confidence 12234678999999988888999999999999999998 999997542 1111111100 00
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+.++.++|.+||+.+|++|||++++++
T Consensus 221 ----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 221 ----------------------------RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ----------------------------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00122334568999999999999999999999875
No 258
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.3e-36 Score=298.33 Aligned_cols=251 Identities=25% Similarity=0.361 Sum_probs=192.4
Q ss_pred CCceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.+.||.|+||.||+|.+. .+++.||+|+++... ...+.+..|+++++.+. +|+||+++++++
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-----~h~niv~~~~~~ 80 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-----HHLNVVNLLGAC 80 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-----cCcchhheeeeE
Confidence 468999999999999999999643 345789999876432 23456778999999885 689999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc--------------------------------------------------
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR-------------------------------------------------- 136 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~-------------------------------------------------- 136 (447)
.. .+..++++|||+ +++|.+.+....
T Consensus 81 ~~---~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (337)
T cd05054 81 TK---PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVE 157 (337)
T ss_pred ec---CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcc
Confidence 64 346899999999 888988775321
Q ss_pred ---------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCC
Q 013220 137 ---------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGS 207 (447)
Q Consensus 137 ---------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (447)
...+++..+..++.||+.||+|||++ ||+||||||+||++.
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~----------------------------- 207 (337)
T cd05054 158 EDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLS----------------------------- 207 (337)
T ss_pred cchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEe-----------------------------
Confidence 12478888999999999999999996 999999999999993
Q ss_pred CCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-----ccCCCCCCccCh
Q 013220 208 TSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAP 282 (447)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aP 282 (447)
....++|+|||++....... ....++..|+||
T Consensus 208 -------------------------------------------~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 208 -------------------------------------------ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred -------------------------------------------CCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 35679999999997543211 122456789999
Q ss_pred HHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhh
Q 013220 283 EVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 361 (447)
Q Consensus 283 E~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (447)
|.+.+..++.++|||||||++|+|++ |..||..... ... ....... +.
T Consensus 245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~-----~~~-~~~~~~~-~~------------------------ 293 (337)
T cd05054 245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-----DEE-FCRRLKE-GT------------------------ 293 (337)
T ss_pred HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc-----cHH-HHHHHhc-cC------------------------
Confidence 99999999999999999999999997 9999965321 111 1111000 00
Q ss_pred hhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 362 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+.++.+++.+||+.+|++||++.|+++|
T Consensus 294 ---------------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 294 ---------------RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred ---------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 001223345688999999999999999999999875
No 259
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.2e-35 Score=282.00 Aligned_cols=246 Identities=24% Similarity=0.354 Sum_probs=197.7
Q ss_pred cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
....|++.+.||.|+||.||+|... ++.||+|.++......+.+.+|+.+++.+ .|+||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~---- 71 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTL------RHPNLVQLLGVVLQ---- 71 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhc------CCcceeeeEEEEcC----
Confidence 3468999999999999999999764 78899999887765567889999999999 78999999998874
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
....++||||+ +++|.+++.......+++..+..++.|++.||.|||++ |++|+||||+||++
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili--------------- 135 (256)
T cd05039 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLV--------------- 135 (256)
T ss_pred CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEE---------------
Confidence 36899999999 78999988765444689999999999999999999997 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccccc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAE 272 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 272 (447)
+..+.++|+|||.+.........
T Consensus 136 ---------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~ 158 (256)
T cd05039 136 ---------------------------------------------------------SEDLVAKVSDFGLAKEASQGQDS 158 (256)
T ss_pred ---------------------------------------------------------eCCCCEEEccccccccccccccc
Confidence 33567999999999766544443
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...+..|+|||.+....++.++|+|||||++|++++ |..||...+ .. .+ ...+...
T Consensus 159 ~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~-~~---~~~~~~~------------- 215 (256)
T cd05039 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LK-DV---VPHVEKG------------- 215 (256)
T ss_pred CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC------HH-HH---HHHHhcC-------------
Confidence 445678999999988888999999999999999997 999986442 11 11 1100000
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...++.+.++|.+||..+|++|||+.++++
T Consensus 216 ------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 216 ------------------------YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred ------------------------CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 000122334678899999999999999999999975
No 260
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-38 Score=285.55 Aligned_cols=291 Identities=25% Similarity=0.399 Sum_probs=221.1
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEech---hHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS---AAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++.|.-..+||+|.||.||+|+..++++.||+|..-. .+.......+|+++|+.+ .|+|++.++..+....
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l------kHenv~nliEic~tk~ 89 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL------KHENVVNLIEICRTKA 89 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh------cchhHHHHHHHHhhcc
Confidence 3678888999999999999999999999999884332 334455778899999999 7788888888766533
Q ss_pred CC----cceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 112 PN----GQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 112 ~~----~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
-. ...+|+||.+|..+|.-++... ...++..++..++.++++||.|+|+. .|+|||+|+.|+|+
T Consensus 90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLI---------- 157 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCEHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLI---------- 157 (376)
T ss_pred CCcccccceeeeeHHHhhhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEE----------
Confidence 21 2359999999999999888543 34589999999999999999999996 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+.++.+||+|||++....
T Consensus 158 --------------------------------------------------------------t~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 158 --------------------------------------------------------------TKDGILKLADFGLARAFS 175 (376)
T ss_pred --------------------------------------------------------------cCCceEEeecccccccee
Confidence 557889999999995443
Q ss_pred cc-------cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 268 KQ-------FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 268 ~~-------~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
.+ .+.++-|.+|++||.+.+. .|+++.|||..||||.+|+++...|.+. +...++..+..++|...
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgn------teqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGN------TEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCC------hHHHHHHHHHHHhccCC
Confidence 22 2334669999999999986 5899999999999999999999988876 57888999999999988
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
.+++..-... +.+..... .......++.....+. +-.-.++..+|+.+||..||++|++++++|+|.||.-.
T Consensus 250 kevWP~~d~l-pL~~sie~-ePl~~~~~rkv~n~~k-----p~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 250 KEVWPNVDNL-PLYQSIEL-EPLPKGQKRKVKNRLK-----PYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred cccCCCcccc-hHHHhccC-CCCCcchhhhhhhhcc-----cccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 7763222211 11211100 0001111111111111 11113467799999999999999999999999999753
No 261
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-35 Score=288.02 Aligned_cols=247 Identities=21% Similarity=0.353 Sum_probs=194.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCC-----eEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTS-----SYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
++|++.+.||+|+||.||+|.+...+ ..||+|.++... .....+.+|+++++.+ +|++|+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l------~h~~i~~~~~~~~ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL------QHPNIVCLLGVCT 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc------CCcccceEEEEEc
Confidence 57999999999999999999876544 789999876432 3345688999999998 7899999999887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRY--------------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
.. ...+++|||+ +++|.+++..... ..+++..+..++.|++.||+|||++ |++|+||||+
T Consensus 79 ~~----~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~ 153 (283)
T cd05048 79 KE----QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAAR 153 (283)
T ss_pred CC----CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-Ceeccccccc
Confidence 43 5789999999 7899888864321 3477888999999999999999997 9999999999
Q ss_pred CeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc
Q 013220 174 NILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM 253 (447)
Q Consensus 174 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (447)
||++ +...
T Consensus 154 Nil~------------------------------------------------------------------------~~~~ 161 (283)
T cd05048 154 NCLV------------------------------------------------------------------------GEGL 161 (283)
T ss_pred eEEE------------------------------------------------------------------------cCCC
Confidence 9999 3356
Q ss_pred ceeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHH
Q 013220 254 RCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDH 327 (447)
Q Consensus 254 ~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~ 327 (447)
.++|+|||++...... .....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+ ....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~------~~~~ 235 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS------NQEV 235 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC------HHHH
Confidence 7999999998654222 123356788999999988889999999999999999997 999997642 1111
Q ss_pred HHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChH
Q 013220 328 LALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 328 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
...+.. .. ....+...+.++.+|+.+||+.||.+|||+.
T Consensus 236 ~~~i~~---~~--------------------------------------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~ 274 (283)
T cd05048 236 IEMIRS---RQ--------------------------------------LLPCPEDCPARVYALMIECWNEIPARRPRFK 274 (283)
T ss_pred HHHHHc---CC--------------------------------------cCCCcccCCHHHHHHHHHHccCChhhCcCHH
Confidence 111100 00 0012344577899999999999999999999
Q ss_pred HHhcC
Q 013220 408 QCLQH 412 (447)
Q Consensus 408 elL~h 412 (447)
|++++
T Consensus 275 ~i~~~ 279 (283)
T cd05048 275 DIHTR 279 (283)
T ss_pred HHHHH
Confidence 99875
No 262
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.7e-35 Score=277.59 Aligned_cols=249 Identities=33% Similarity=0.552 Sum_probs=200.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH-hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ-FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
.|.+.+.||+|++|.||++.+..++..|++|++..... ....+.+|+++++.+ .|++|+++++.+... .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~----~ 70 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC------KHPNIVKYYGSYLKK----D 70 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC------CCCCEeEEEEEEecC----C
Confidence 38889999999999999999988899999998766543 467888999999999 788999999988754 6
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..+++|||+ +++|.+++.... ..+++..+..++.|++.||++||.. |++|+||+|+||+++
T Consensus 71 ~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~---------------- 132 (253)
T cd05122 71 ELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLT---------------- 132 (253)
T ss_pred eEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEc----------------
Confidence 899999999 688988876542 4589999999999999999999996 999999999999993
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--AE 272 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--~~ 272 (447)
....++|+|||.+....... ..
T Consensus 133 --------------------------------------------------------~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 133 --------------------------------------------------------SDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred --------------------------------------------------------cCCeEEEeeccccccccccccccc
Confidence 35679999999987655432 44
Q ss_pred CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 273 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
..++..|+|||.+.+..++.++|+||||+++|+|++|..||...+ . ...+..........
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~---~~~~~~~~~~~~~~----------- 216 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP------P---MKALFKIATNGPPG----------- 216 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc------h---HHHHHHHHhcCCCC-----------
Confidence 568899999999988888999999999999999999999996542 1 11111110000000
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 414 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~ 414 (447)
...+...+..+.++|.+||+.||++|||+.|+|+|||
T Consensus 217 -------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 -------------------------LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -------------------------cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0011112568999999999999999999999999999
No 263
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.2e-35 Score=286.50 Aligned_cols=254 Identities=22% Similarity=0.371 Sum_probs=194.4
Q ss_pred CCceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.++||+|+||.||+|.+. ..+..||+|.+.... .....+.+|+.+++.+ +|+||+++++.+
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~ 78 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF------TCHHVVRLLGVV 78 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC------CCCCeeeEEEEE
Confidence 478999999999999999999654 235689999865432 2234577899999998 789999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhcc--------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEee
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY--------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~--------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
... ...++||||+ +++|.+.+..... ..+....+..++.|++.||.|||++ +|+||||||+||++.
T Consensus 79 ~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili~ 153 (288)
T cd05061 79 SKG----QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVA 153 (288)
T ss_pred cCC----CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEEc
Confidence 753 5789999999 8899998864221 2245667889999999999999997 999999999999993
Q ss_pred ecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEe
Q 013220 179 STIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVV 258 (447)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~ 258 (447)
.+..++|+
T Consensus 154 ------------------------------------------------------------------------~~~~~~L~ 161 (288)
T cd05061 154 ------------------------------------------------------------------------HDFTVKIG 161 (288)
T ss_pred ------------------------------------------------------------------------CCCcEEEC
Confidence 35679999
Q ss_pred ecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHH
Q 013220 259 DFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMM 332 (447)
Q Consensus 259 Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~ 332 (447)
|||++....... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+ .......+.
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~ 235 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS------NEQVLKFVM 235 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHH
Confidence 999986443211 12244678999999988889999999999999999998 788886542 111111110
Q ss_pred HHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc-
Q 013220 333 ELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ- 411 (447)
Q Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~- 411 (447)
. +. ....+...+..+.+++.+||+.||++|||+.++++
T Consensus 236 ~--~~---------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 274 (288)
T cd05061 236 D--GG---------------------------------------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 274 (288)
T ss_pred c--CC---------------------------------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 0 00 00122334568999999999999999999999986
Q ss_pred -----Ccccccc
Q 013220 412 -----HPWLSLR 418 (447)
Q Consensus 412 -----hp~f~~~ 418 (447)
||||+..
T Consensus 275 l~~~~~~~~~~~ 286 (288)
T cd05061 275 LKDDLHPSFPEV 286 (288)
T ss_pred HHhhcCCCCCCC
Confidence 9999864
No 264
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.6e-36 Score=288.38 Aligned_cols=247 Identities=22% Similarity=0.362 Sum_probs=194.3
Q ss_pred CCceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|.+.+.||+|+||.||+|++. .++..||+|.++.... ..+.+.+|+++++.+ .|+||+++++.+
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~ 77 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF------QHENIVKFYGVC 77 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc------CCCCchheeeEE
Confidence 467999999999999999999764 3468899998765432 356788999999999 788999999998
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPEN 174 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~N 174 (447)
... ...++||||+ +++|.+++.... ...+++..+..++.|++.||++||++ |++||||||+|
T Consensus 78 ~~~----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~n 152 (280)
T cd05049 78 TEG----DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRN 152 (280)
T ss_pred ecC----CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-Ceeccccccce
Confidence 753 6899999999 889998886432 13377888999999999999999997 99999999999
Q ss_pred eEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccc
Q 013220 175 ILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR 254 (447)
Q Consensus 175 ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (447)
|++ +....
T Consensus 153 ili------------------------------------------------------------------------~~~~~ 160 (280)
T cd05049 153 CLV------------------------------------------------------------------------GYDLV 160 (280)
T ss_pred EEE------------------------------------------------------------------------cCCCe
Confidence 999 34577
Q ss_pred eeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHH
Q 013220 255 CKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHL 328 (447)
Q Consensus 255 ~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~ 328 (447)
++|+|||.+...... .....++..|+|||++.+..++.++|||||||++|+|++ |..||...+ .....
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~------~~~~~ 234 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS------NEEVI 234 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHH
Confidence 999999998643221 122345678999999999899999999999999999998 999996542 11111
Q ss_pred HHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHH
Q 013220 329 ALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ 408 (447)
Q Consensus 329 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~e 408 (447)
..+. .+.. ...+...+..+.+|+.+||+.||++|||+.|
T Consensus 235 ~~~~--~~~~---------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 273 (280)
T cd05049 235 ECIT--QGRL---------------------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKD 273 (280)
T ss_pred HHHH--cCCc---------------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 1111 0000 0112334668899999999999999999999
Q ss_pred Hhc
Q 013220 409 CLQ 411 (447)
Q Consensus 409 lL~ 411 (447)
+++
T Consensus 274 il~ 276 (280)
T cd05049 274 IHE 276 (280)
T ss_pred HHH
Confidence 975
No 265
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=8.2e-36 Score=292.45 Aligned_cols=251 Identities=28% Similarity=0.481 Sum_probs=198.2
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
.|....+||.|+||.||+|.+..++..||+|++.... .....+.+|+.+++.+ +|+||+++++.+.. +.
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~----~~ 91 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY------QHQNVVEMYKSYLV----GE 91 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC------CCCchhhhhhheee----CC
Confidence 3555668999999999999998899999999875432 2345678899999888 78999999998874 36
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..+++|||+ +++|..++.. ..+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 92 ~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill----------------- 150 (297)
T cd06659 92 ELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILL----------------- 150 (297)
T ss_pred eEEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEE-----------------
Confidence 899999999 7788876643 3488999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
+....++|+|||++...... ..
T Consensus 151 -------------------------------------------------------~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 151 -------------------------------------------------------TLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred -------------------------------------------------------ccCCcEEEeechhHhhccccccccc
Confidence 34567999999998644322 22
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...++..|+|||++.+..++.++|+|||||++|+|++|..||...+ ....+ ..+.+..+..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------~~~~~---~~~~~~~~~~---------- 236 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS------PVQAM---KRLRDSPPPK---------- 236 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHH---HHHhccCCCC----------
Confidence 3468899999999988889999999999999999999999996542 11111 1111110000
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
.......+..+.++|.+||+.+|++|||++++++||||..-
T Consensus 237 --------------------------~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 237 --------------------------LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred --------------------------ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 00112335678899999999999999999999999999864
No 266
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.3e-35 Score=279.41 Aligned_cols=249 Identities=26% Similarity=0.438 Sum_probs=201.6
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|.+.+.||.|+||.||++.+..++..|++|.+.... .....+.+|+++++.+ +|+|++++++.+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~~~~~~~~~~~~--- 71 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL------NHPNIIKYYESFEEK--- 71 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc------CCCChhheEEEEecC---
Confidence 5899999999999999999999899999999876542 3456788899999999 788999999988753
Q ss_pred cceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+++|||+ +++|...+.... ...+++..+..++.+++.||.+||+. |++|+||+|+||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~------------- 136 (258)
T cd08215 72 -GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFL------------- 136 (258)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEE-------------
Confidence 7899999999 778988886543 35689999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ- 269 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~- 269 (447)
+....++|+|||.+......
T Consensus 137 -----------------------------------------------------------~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 137 -----------------------------------------------------------TSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred -----------------------------------------------------------cCCCcEEECCccceeecccCc
Confidence 33567999999998654432
Q ss_pred --cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 --FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 --~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....+++.|+|||.+.+..++.++|+||+|+++++|++|..||...+ ........ ....
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~---~~~~--------- 219 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN------LLELALKI---LKGQ--------- 219 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc------HHHHHHHH---hcCC---------
Confidence 223467889999999988889999999999999999999999996442 11111110 0000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...++...+..+.+++.+||..+|++|||+.++|+||||
T Consensus 220 -----------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 220 -----------------------------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred -----------------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 001223446688999999999999999999999999997
No 267
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.1e-35 Score=283.03 Aligned_cols=245 Identities=24% Similarity=0.387 Sum_probs=192.7
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.++|++.++||+|+||.||+|.+. .+..+|+|.+.......+.+.+|+++++.+ +|++|+++++.+..
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l------~~~~i~~~~~~~~~----- 72 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKL------RHDKLVQLYAVVSE----- 72 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhc------CCCceEEEEeEECC-----
Confidence 368999999999999999999765 556799998876555556789999999999 78899999987643
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...+++|||+ +++|.+.+.......+++..+..++.|++.||+|||++ ||+|+||||+||++.
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~--------------- 136 (260)
T cd05070 73 EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVG--------------- 136 (260)
T ss_pred CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEe---------------
Confidence 3578999999 78999888654444588999999999999999999996 999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc--
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-- 271 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~-- 271 (447)
....++|+|||.+........
T Consensus 137 ---------------------------------------------------------~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 137 ---------------------------------------------------------DGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred ---------------------------------------------------------CCceEEeCCceeeeeccCccccc
Confidence 356799999999865433211
Q ss_pred --cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 272 --EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 272 --~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
...++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+ .......+. ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~---~~~---------- 220 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN------NREVLEQVE---RGY---------- 220 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHH---cCC----------
Confidence 1234567999999988889999999999999999998 889996542 111111110 000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+|+.+||+.+|++|||++++++
T Consensus 221 ----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 221 ----------------------------RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred ----------------------------CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 01123344668999999999999999999999873
No 268
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.9e-35 Score=281.32 Aligned_cols=245 Identities=25% Similarity=0.396 Sum_probs=192.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.++|.+.++||+|++|.||+|.+..+ ..+|+|.+.......+.+.+|+++++.+ .|++|+++++++..
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~----- 72 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKL------RHDKLVPLYAVVSE----- 72 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhC------CCCCeeeEEEEEcC-----
Confidence 46899999999999999999987655 4589998776555556788999999999 78899999887642
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...+++|||+ +++|.+.+.......+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill---------------- 135 (260)
T cd05069 73 EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILV---------------- 135 (260)
T ss_pred CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEE----------------
Confidence 4578999999 77999888654444578899999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc---
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--- 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--- 270 (447)
+....++|+|||.+.......
T Consensus 136 --------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 136 --------------------------------------------------------GDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred --------------------------------------------------------cCCCeEEECCCccceEccCCcccc
Confidence 335679999999986543221
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.. +......+. ...
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~---~~~---------- 220 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV------NREVLEQVE---RGY---------- 220 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHH---cCC----------
Confidence 11234678999999988889999999999999999998 899997542 111111111 000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+++.+||..||++||+++++++
T Consensus 221 ----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 221 ----------------------------RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred ----------------------------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00123344678999999999999999999999875
No 269
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.4e-35 Score=282.01 Aligned_cols=244 Identities=25% Similarity=0.373 Sum_probs=191.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
.+|++.++||+|+||.||+++... +..+|+|.+.........+.+|+++++.+ +|+||+++++++... .
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~----~ 72 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKL------SHPKLVQLYGVCTQQ----K 72 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHC------CCCCceeEEEEEccC----C
Confidence 569999999999999999998754 56799998776555456788899999999 789999999988743 6
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ ||+|+||||+||++
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i----------------- 133 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLV----------------- 133 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEE-----------------
Confidence 799999999 889988876433 3478899999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc----
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---- 270 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~---- 270 (447)
+....++|+|||.+.......
T Consensus 134 -------------------------------------------------------~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 134 -------------------------------------------------------SSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred -------------------------------------------------------cCCCeEEECCCCCccccCCCceecc
Confidence 335679999999886543211
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++ |+.||...+ .......+.+ +.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~------~~~~~~~i~~--~~------------ 218 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS------NYEVVEMISR--GF------------ 218 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHC--CC------------
Confidence 11234568999999988889999999999999999999 899996542 1111111110 00
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+++.+||+.||++|||++++++
T Consensus 219 ---------------------------~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 219 ---------------------------RLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred ---------------------------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00012223557889999999999999999999985
No 270
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.7e-35 Score=281.61 Aligned_cols=245 Identities=21% Similarity=0.287 Sum_probs=193.5
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
..+|++.+.||+|+||.||+|... +..||+|..+.+.. .+.+.+|+.+++.+ .|++|+++++++.. .+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-~~~~~~e~~~l~~l------~~~~i~~~~~~~~~---~~ 72 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT-AQAFLAEASVMTQL------RHSNLVQLLGVIVE---EK 72 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCch-HHHHHHHHHHHHhC------CCCCeeeEEEEEEc---CC
Confidence 467999999999999999999654 77899998875543 45788999999999 78899999987654 23
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...+++|||+ +++|.+.+.......+++..+..++.|++.||+|||++ |++||||||+||++
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~---------------- 135 (256)
T cd05082 73 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLV---------------- 135 (256)
T ss_pred CceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEE----------------
Confidence 5789999999 78999888655444578899999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccC
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE 273 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 273 (447)
+.+..++|+|||++..........
T Consensus 136 --------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~ 159 (256)
T cd05082 136 --------------------------------------------------------SEDNVAKVSDFGLTKEASSTQDTG 159 (256)
T ss_pred --------------------------------------------------------cCCCcEEecCCccceeccccCCCC
Confidence 335679999999987554433334
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
..+..|+|||++.+..++.++|||||||++|+|++ |..||...+ ... ....+...
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-------~~~---~~~~~~~~-------------- 215 (256)
T cd05082 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-------LKD---VVPRVEKG-------------- 215 (256)
T ss_pred ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-------HHH---HHHHHhcC--------------
Confidence 45678999999988889999999999999999997 999986432 111 11100000
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.+++.+||+.+|++|||+.++++
T Consensus 216 -----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 216 -----------------------YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -----------------------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 001122344678899999999999999999999975
No 271
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.8e-35 Score=289.89 Aligned_cols=253 Identities=26% Similarity=0.390 Sum_probs=197.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
..|...++||+|+||+||+|++..++..|++|.+... ......+.+|+++++.+ +|+|++++++++..
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~-- 92 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL------KHPNTIEYKGCYLK-- 92 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC------CCCCCccEEEEEEe--
Confidence 3477788999999999999999999999999987532 22334677899999998 78999999998875
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+...|+||||+.+++.+.+.... ..+++..+..++.|++.||+|||++ |++|+||+|+||++
T Consensus 93 --~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili-------------- 154 (313)
T cd06633 93 --EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILL-------------- 154 (313)
T ss_pred --CCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEE--------------
Confidence 36899999999778877765432 4588999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 271 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~ 271 (447)
.....++|+|||.+.... ...
T Consensus 155 ----------------------------------------------------------~~~~~~kL~dfg~~~~~~-~~~ 175 (313)
T cd06633 155 ----------------------------------------------------------TEPGQVKLADFGSASKSS-PAN 175 (313)
T ss_pred ----------------------------------------------------------CCCCCEEEeecCCCcccC-CCC
Confidence 335569999999885432 223
Q ss_pred cCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 272 EEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
...++..|+|||.+. ...++.++|+|||||++|+|++|..||...+ ....+..+.. +..+.
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~--~~~~~-------- 239 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQ--NDSPT-------- 239 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHh--cCCCC--------
Confidence 457889999999985 3457889999999999999999999996542 1111111100 00000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
......+..+.+|+.+||+.+|++||++.++++||||+...
T Consensus 240 ------------------------------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 240 ------------------------------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred ------------------------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 00112345788999999999999999999999999999654
No 272
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.8e-35 Score=278.18 Aligned_cols=247 Identities=30% Similarity=0.512 Sum_probs=202.1
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.+.||+|++|.||+|++..+++.|++|.+.... .....+.+|+++++.+ .|++++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~---- 70 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL------KHPNIVKYIGSIET---- 70 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC------CCCCccEEEEEEEe----
Confidence 5899999999999999999999899999999876654 3456788999999999 78889999988774
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+...+++|||+ +++|.+.+... ..+++..+..++.|++.||.+||++ ||+|+||+|+||+++
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~-------------- 133 (254)
T cd06627 71 SDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTT-------------- 133 (254)
T ss_pred CCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEC--------------
Confidence 36899999999 77898887654 4589999999999999999999996 999999999999993
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA- 271 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~- 271 (447)
....++|+|||.+........
T Consensus 134 ----------------------------------------------------------~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 134 ----------------------------------------------------------KDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ----------------------------------------------------------CCCCEEEeccccceecCCCccc
Confidence 356799999999976543322
Q ss_pred --cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 272 --EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 272 --~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
...++..|+|||.+.+..++.++|+||||+++|+|++|..||...+ ....+.+..
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~---------~~~~~~~~~-------------- 212 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN---------PMAALFRIV-------------- 212 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc---------HHHHHHHHh--------------
Confidence 3467889999999988778899999999999999999999996442 111111110
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
......++...+..+.+++.+||+.+|++|||+.+++.||||
T Consensus 213 ------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 213 ------------------------QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ------------------------ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 001112344557789999999999999999999999999997
No 273
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=279.15 Aligned_cols=254 Identities=24% Similarity=0.355 Sum_probs=204.9
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
.+.++.||+|+-|+||+++...++...|||..... +.....+...+.++.+-. +.|+||+.+++|... .
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~-----dcpyIV~c~GyFi~n----~ 164 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVQCFGYFITN----T 164 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc-----CCCeeeeeeeEEeeC----c
Confidence 45778899999999999999999999999976543 344556666777666553 689999999999964 6
Q ss_pred eEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 116 HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 116 ~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.+++.||.|+.++..++.+-. .+++|.-+-.+..-++.||.||-.+.||+|||+||.|||+
T Consensus 165 dV~IcMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl------------------ 225 (391)
T KOG0983|consen 165 DVFICMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL------------------ 225 (391)
T ss_pred hHHHHHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE------------------
Confidence 789999999888888776543 6799999999999999999999998899999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--cccC
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEE 273 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~ 273 (447)
+..+++||||||++-...++ .++.
T Consensus 226 ------------------------------------------------------De~GniKlCDFGIsGrlvdSkAhtrs 251 (391)
T KOG0983|consen 226 ------------------------------------------------------DERGNIKLCDFGISGRLVDSKAHTRS 251 (391)
T ss_pred ------------------------------------------------------ccCCCEEeecccccceeecccccccc
Confidence 66789999999999765543 4556
Q ss_pred CCCCCccChHHhhc---CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 274 IQTRQYRAPEVILR---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 274 ~gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
.|.+.|||||.+.- ..|+..+|+||||+++++|.||++||.+-+ .+-..+..+. ...|..+
T Consensus 252 AGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~-----tdFe~ltkvl---n~ePP~L-------- 315 (391)
T KOG0983|consen 252 AGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK-----TDFEVLTKVL---NEEPPLL-------- 315 (391)
T ss_pred cCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC-----ccHHHHHHHH---hcCCCCC--------
Confidence 89999999999963 358899999999999999999999998653 2333333333 2333211
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
+.....++.|.+|+..||+.|+.+||.-.++|+|||+..
T Consensus 316 ----------------------------~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 316 ----------------------------PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred ----------------------------CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 011124778999999999999999999999999997664
No 274
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.6e-35 Score=282.28 Aligned_cols=245 Identities=22% Similarity=0.347 Sum_probs=192.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
++|++.+.||+|+||+||+|++.. +..+|+|.++........+.+|+++++.+ +|+||+++++++... .
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~----~ 72 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL------SHEKLVQLYGVCTKQ----R 72 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC------CCCCeeeEEEEEccC----C
Confidence 579999999999999999997653 45699998876555456788999999998 789999999988643 5
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..+++|||+ +++|.+++.... ..+++..+..++.|++.||+|||++ |++|+||||+||++
T Consensus 73 ~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili----------------- 133 (256)
T cd05113 73 PIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLV----------------- 133 (256)
T ss_pred CcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEE-----------------
Confidence 789999999 788988876533 3589999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-cc-
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-AE- 272 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-~~- 272 (447)
+.+..++|+|||.+....... ..
T Consensus 134 -------------------------------------------------------~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 134 -------------------------------------------------------DDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred -------------------------------------------------------cCCCCEEECCCccceecCCCceeec
Confidence 335679999999886443221 11
Q ss_pred --CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 273 --EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 273 --~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
..++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... .......+.+ +.
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~--~~------------ 218 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN------NSETVEKVSQ--GL------------ 218 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC------HHHHHHHHhc--CC------------
Confidence 224567999999988889999999999999999998 999986442 1111111110 00
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+..+.+++.+||+.||++|||+.+++++
T Consensus 219 ---------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 219 ---------------------------RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ---------------------------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 000122235688999999999999999999999864
No 275
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.2e-35 Score=284.01 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=192.4
Q ss_pred ccccCCceEEEEeecccCceEEEEEEeCCCCe----EEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeec
Q 013220 31 DLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSS----YVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLI 104 (447)
Q Consensus 31 ~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~ 104 (447)
++++..+|++.++||+|+||+||+|++..++. .||+|+.+.. ......+.+|+.+++.+ +|+||++++
T Consensus 2 ~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~ 75 (279)
T cd05109 2 RILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV------GSPYVCRLL 75 (279)
T ss_pred cccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc------CCCCCceEE
Confidence 45667899999999999999999998766655 4899987643 33455778888888888 788999999
Q ss_pred ccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCC
Q 013220 105 DHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDP 183 (447)
Q Consensus 105 ~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~ 183 (447)
+.+.. ...+++|||+ +++|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||++.
T Consensus 76 ~~~~~-----~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~----- 143 (279)
T cd05109 76 GICLT-----STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVK----- 143 (279)
T ss_pred EEEcC-----CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEc-----
Confidence 88764 3577999999 889988876432 3588999999999999999999996 999999999999993
Q ss_pred CCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcc
Q 013220 184 SKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA 263 (447)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a 263 (447)
....++|+|||++
T Consensus 144 -------------------------------------------------------------------~~~~~kL~dfG~~ 156 (279)
T cd05109 144 -------------------------------------------------------------------SPNHVKITDFGLA 156 (279)
T ss_pred -------------------------------------------------------------------CCCcEEECCCCce
Confidence 3456999999998
Q ss_pred cccccccc-----cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCC
Q 013220 264 CRANKQFA-----EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGK 337 (447)
Q Consensus 264 ~~~~~~~~-----~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~ 337 (447)
........ ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.... ...+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~- 228 (279)
T cd05109 157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-------AREIPDLLEKGE- 228 (279)
T ss_pred eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHHCCC-
Confidence 75543221 1234568999999988889999999999999999998 889986432 111111111000
Q ss_pred CCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 338 MPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+++.+||+.||++|||+.+++.
T Consensus 229 ---------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 229 ---------------------------------------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ---------------------------------------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00112234567889999999999999999999984
No 276
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.7e-35 Score=280.32 Aligned_cols=246 Identities=25% Similarity=0.407 Sum_probs=196.0
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.++|++.++||+|+||+||+|.+. .+..||+|.+.........+.+|+++++.+ +|++|+++++++.. .
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~----~ 73 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKL------RHDKLVQLYAVCSE----E 73 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhC------CCCCEeeeeeeeec----C
Confidence 478999999999999999999875 457899999887665567889999999998 78999999998764 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|.+.+.......+++..+..++.|++.||.|||++ |++|+||||+||++
T Consensus 74 ~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili---------------- 136 (261)
T cd05034 74 EPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILV---------------- 136 (261)
T ss_pred CceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEE----------------
Confidence 5799999999 78999888654444689999999999999999999997 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc---
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--- 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--- 270 (447)
+.+..++|+|||.+.......
T Consensus 137 --------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~ 160 (261)
T cd05034 137 --------------------------------------------------------GENLVCKIADFGLARLIEDDEYTA 160 (261)
T ss_pred --------------------------------------------------------cCCCCEEECccccceeccchhhhh
Confidence 335679999999986544211
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.....+..|+|||.+.+..++.++|+|||||++|++++ |+.||.+.+ ....+..+.. ..
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~------~~~~~~~~~~---~~---------- 221 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT------NREVLEQVER---GY---------- 221 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc---CC----------
Confidence 11224568999999998889999999999999999998 999996542 1112221111 00
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+.++.+++.+||+.+|++||+++++++
T Consensus 222 ----------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 222 ----------------------------RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ----------------------------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 00122233568899999999999999999999874
No 277
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.1e-35 Score=284.37 Aligned_cols=252 Identities=27% Similarity=0.452 Sum_probs=199.2
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
+|.-.+.||.|++|.||+|.+..++..+++|.+.... ...+.+.+|+.+++.+ +|+||+++++.+.. ++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~------~h~~vv~~~~~~~~----~~ 89 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY------QHPNIVEMYSSYLV----GD 89 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc------CCCChheEEEEEEc----CC
Confidence 4666679999999999999998899999999875433 2345678899999998 78999999998874 36
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
+.+++|||+ +++|.+.+.. ..+++..+..++.|++.||+|||++ ||+||||+|+||++
T Consensus 90 ~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~----------------- 148 (285)
T cd06648 90 ELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILL----------------- 148 (285)
T ss_pred eEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEE-----------------
Confidence 899999999 8899888765 3488899999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
+.+..++|+|||.+...... ..
T Consensus 149 -------------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 149 -------------------------------------------------------TSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred -------------------------------------------------------cCCCcEEEcccccchhhccCCcccc
Confidence 33567999999987543322 12
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ ....+. .+....+..
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~------~~~~~~---~~~~~~~~~---------- 234 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP------PLQAMK---RIRDNLPPK---------- 234 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC------HHHHHH---HHHhcCCCC----------
Confidence 2468899999999988889999999999999999999999996542 111111 111000000
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
...+...+..+.+|+.+||+.+|++|||+.++++||||+...
T Consensus 235 --------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 235 --------------------------LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred --------------------------CcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 001122456899999999999999999999999999998654
No 278
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6e-35 Score=280.00 Aligned_cols=247 Identities=24% Similarity=0.377 Sum_probs=194.8
Q ss_pred cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
..++|++.+.||.|++|.||+|.+. ++..||+|.++......+.+.+|+++++.+ .|+||+++++.+..
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~---- 72 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKL------RHPKLIQLYAVCTL---- 72 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHC------CCCCccceeEEEec----
Confidence 3478999999999999999999865 456899998876555566788999999999 78899999998764
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
....+++|||+ +++|.+.+.......+++..+..++.|++.||.+||++ ||+|+||||+||++
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~--------------- 136 (261)
T cd05068 73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLV--------------- 136 (261)
T ss_pred CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEE---------------
Confidence 36789999999 88999888654434588999999999999999999996 99999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-c
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-A 271 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-~ 271 (447)
+....++|+|||++....... .
T Consensus 137 ---------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 137 ---------------------------------------------------------GENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred ---------------------------------------------------------cCCCCEEECCcceEEEccCCccc
Confidence 335679999999987654321 1
Q ss_pred cCCC---CCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 272 EEIQ---TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 272 ~~~g---t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
...+ +..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.. .......+. ...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~---~~~--------- 221 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT------NAEVLQQVD---QGY--------- 221 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHH---cCC---------
Confidence 1222 357999999988889999999999999999998 999996542 111111111 000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+++.+||+.+|++||++++++.
T Consensus 222 -----------------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 222 -----------------------------RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred -----------------------------CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 00122334668999999999999999999999874
No 279
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.1e-35 Score=285.14 Aligned_cols=255 Identities=30% Similarity=0.463 Sum_probs=204.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
..|.+.+.||+|++|.||+|.+..++..|++|++.........+.+|+++++.+ +|+||+++++.+... .
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~----~ 88 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC------KHPNIVDYYDSYLVG----D 88 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC------CCCCeeEEEEEEEEC----C
Confidence 569999999999999999999988899999998876554456788999999998 789999999998754 6
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..+++|||+ +++|.+++.... ..++...+..++.|++.||+|||+. ||+|+|++|+||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i----------------- 149 (286)
T cd06614 89 ELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILL----------------- 149 (286)
T ss_pred EEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEE-----------------
Confidence 899999999 689999887543 3589999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FA 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~ 271 (447)
+....++|+|||.+...... ..
T Consensus 150 -------------------------------------------------------~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 150 -------------------------------------------------------SKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred -------------------------------------------------------cCCCCEEECccchhhhhccchhhhc
Confidence 33567999999988654332 12
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 351 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (447)
...++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ .. ..........+.
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~------~~---~~~~~~~~~~~~----------- 234 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP------PL---RALFLITTKGIP----------- 234 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC------HH---HHHHHHHhcCCC-----------
Confidence 2357789999999988888999999999999999999999986432 11 111111000000
Q ss_pred hhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 352 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
....+...+..+.+||.+||+.+|.+|||+.++|+||||+...
T Consensus 235 -------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 235 -------------------------PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred -------------------------CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 0001122456889999999999999999999999999999743
No 280
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.3e-35 Score=278.72 Aligned_cols=239 Identities=21% Similarity=0.358 Sum_probs=185.8
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
++||+|+||.||+|++..+++.||+|..... ......+.+|+++++.+ +|+||+++++++... ...++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~----~~~~l 70 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY------SHPNIVRLIGVCTQK----QPIYI 70 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC------CCCCcceEEEEEcCC----CCeEE
Confidence 4689999999999999989999999976533 33456788999999998 789999999988753 67999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|.+.+... ...+++..+..++.|++.||+|||++ ||+|+||||+||++.
T Consensus 71 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~-------------------- 128 (252)
T cd05084 71 VMELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVT-------------------- 128 (252)
T ss_pred EEeeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEc--------------------
Confidence 99999 88898887542 23478999999999999999999996 999999999999993
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccccc-----C
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAE-----E 273 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-----~ 273 (447)
....++|+|||.+......... .
T Consensus 129 ----------------------------------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 129 ----------------------------------------------------EKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred ----------------------------------------------------CCCcEEECccccCcccccccccccCCCC
Confidence 3556999999998654322111 1
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
..+..|+|||.+.+..++.++|+|||||++|+|++ |..||...+ .......+.. .
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~------~~~~~~~~~~---~--------------- 212 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS------NQQTREAIEQ---G--------------- 212 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC------HHHHHHHHHc---C---------------
Confidence 22456999999988889999999999999999997 888885432 1111110000 0
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.+|+.+||+.+|++|||+.++++
T Consensus 213 -----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 213 -----------------------VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -----------------------CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001122334668899999999999999999999974
No 281
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8.4e-35 Score=281.02 Aligned_cols=247 Identities=22% Similarity=0.360 Sum_probs=192.7
Q ss_pred CCceEEEEeecccCceEEEEEEeCCC-----CeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRT-----SSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.+.||+|+||.||+|.+... +..||+|.+.... .....+.+|+++++.+ +|+||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~ 78 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF------NCHHVVRLLGVV 78 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC------CCCceeEEEEEE
Confidence 36899999999999999999987643 4889999876443 2344677899999888 789999999998
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc--------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEee
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR--------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
... ...++||||+ +++|.+.+.... ...+++..+..++.|++.||.|||++ +|+|+||||+||++
T Consensus 79 ~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nill- 152 (277)
T cd05032 79 STG----QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCMV- 152 (277)
T ss_pred cCC----CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEEE-
Confidence 753 6899999999 789998885422 12367788999999999999999996 99999999999999
Q ss_pred ecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEe
Q 013220 179 STIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVV 258 (447)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~ 258 (447)
+....++|+
T Consensus 153 -----------------------------------------------------------------------~~~~~~kl~ 161 (277)
T cd05032 153 -----------------------------------------------------------------------AEDLTVKIG 161 (277)
T ss_pred -----------------------------------------------------------------------cCCCCEEEC
Confidence 335679999
Q ss_pred ecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHH
Q 013220 259 DFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMM 332 (447)
Q Consensus 259 Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~ 332 (447)
|||.+...... .....++..|+|||.+.+..++.++|||||||++|++++ |..||...+ . .......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~-~~~~~~~ 234 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS------N-EEVLKFV 234 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC------H-HHHHHHH
Confidence 99998654322 123356788999999988889999999999999999998 999986542 1 1111111
Q ss_pred HHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 333 ELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
. .+ .....+...+..+.++|.+||+.+|++|||+.++++
T Consensus 235 ~-~~---------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 235 I-DG---------------------------------------GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred h-cC---------------------------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 00 001123344678999999999999999999999985
No 282
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.5e-35 Score=286.32 Aligned_cols=249 Identities=23% Similarity=0.354 Sum_probs=193.4
Q ss_pred CCceEEEEeecccCceEEEEEEe-----CCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYD-----TRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|.+.+.||+|+||.||+|.+ ..++..||+|+++.. ....+.+.+|+++++.+. +|+||+++++.+
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~ 108 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-----NHENIVNLLGAC 108 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-----CCCCcceEEEEE
Confidence 36899999999999999999975 234668999987653 233457889999999984 689999999988
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~ 186 (447)
... ...+++|||+ +++|.+++.......+++..+..++.|++.||+|||++ +|+|+||||+||++.
T Consensus 109 ~~~----~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~-------- 175 (302)
T cd05055 109 TIG----GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLT-------- 175 (302)
T ss_pred ecC----CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEc--------
Confidence 754 5799999999 78999888654434489999999999999999999996 999999999999993
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc
Q 013220 187 PIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA 266 (447)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~ 266 (447)
....++|+|||.+...
T Consensus 176 ----------------------------------------------------------------~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 176 ----------------------------------------------------------------HGKIVKICDFGLARDI 191 (302)
T ss_pred ----------------------------------------------------------------CCCeEEECCCcccccc
Confidence 3456899999998644
Q ss_pred cccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 267 NKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 267 ~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
.... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||..... .... .+.+...
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~------~~~~---~~~~~~~-- 260 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV------DSKF---YKLIKEG-- 260 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc------hHHH---HHHHHcC--
Confidence 3221 12235678999999998889999999999999999998 9999865421 1110 0100000
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.+|+.+||+.+|++|||+.|+++
T Consensus 261 -----------------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 261 -----------------------------------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred -----------------------------------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 000112234568999999999999999999999985
No 283
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.5e-35 Score=282.85 Aligned_cols=258 Identities=25% Similarity=0.330 Sum_probs=192.5
Q ss_pred Cce-EEEEeecccCceEEEEEE----eCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRY-IAQRKLGWGQFSIVWLAY----DTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y-~l~~~lG~G~~g~Vy~a~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
+|| ++.+.||+|+||+||++. ...++..||+|+++... .....+.+|+++++.+ .|+||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~ 76 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL------YHENIVKYKGCCS 76 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC------CCCCEeeEEEEEe
Confidence 355 999999999999998874 33567899999887542 2355778899999999 7899999999876
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.. .....+++|||+ +++|.+.+... .+++..+..++.|++.||+|||++ ||+|+||||+||++
T Consensus 77 ~~--~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili---------- 140 (283)
T cd05080 77 EQ--GGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLL---------- 140 (283)
T ss_pred cC--CCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEE----------
Confidence 43 345789999999 88898887543 489999999999999999999997 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+....++|+|||++....
T Consensus 141 --------------------------------------------------------------~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 141 --------------------------------------------------------------DNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred --------------------------------------------------------------cCCCcEEEeecccccccC
Confidence 335679999999987554
Q ss_pred ccc------ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 268 KQF------AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 268 ~~~------~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
... ....++..|+|||.+.+..++.++|||||||++|+|++|..||...... . ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--------~---~~~~~~~~~~ 227 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--------F---EEMIGPKQGQ 227 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--------h---hhhhcccccc
Confidence 321 1123567799999998888899999999999999999999998654211 0 0000000000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhh--hhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLV--DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
. ....+..... .....+...+..+.+++.+||+.||++|||++++++
T Consensus 228 ~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 228 M-----------------------TVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred c-----------------------chhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 0000000000 011233445678999999999999999999999985
No 284
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6.1e-35 Score=279.60 Aligned_cols=248 Identities=27% Similarity=0.469 Sum_probs=193.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
||.+.++||+|+||+||++.+..++..+++|+.+.. ......+..|+.+++.+ +|+||+++++.+...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~ 74 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL------DHPAIVKFHASFLER 74 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC------CCCcHHHHHHHHhcC
Confidence 699999999999999999998887777777765531 12233566788888888 789999999988753
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
...++||||+ +++|.+.+... ....+++..+..++.|++.||+|||+. |++|+|++|+||++..
T Consensus 75 ----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~-------- 141 (260)
T cd08222 75 ----DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN-------- 141 (260)
T ss_pred ----CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec--------
Confidence 5799999999 78888777532 224589999999999999999999996 9999999999999932
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
..++|+|||.+....
T Consensus 142 -----------------------------------------------------------------~~~~l~d~g~~~~~~ 156 (260)
T cd08222 142 -----------------------------------------------------------------NLLKIGDFGVSRLLM 156 (260)
T ss_pred -----------------------------------------------------------------CCEeecccCceeecC
Confidence 248999999886543
Q ss_pred cc---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhh
Q 013220 268 KQ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 344 (447)
Q Consensus 268 ~~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (447)
.. .....++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~------- 220 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN---------FLSVVLRIVEG------- 220 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HHHHHHHHHcC-------
Confidence 21 223457889999999988788899999999999999999999995431 11111111110
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
..+..+...+.++.++|.+||+.||++||++.++++||||
T Consensus 221 -------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 221 -------------------------------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -------------------------------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 0111234456788999999999999999999999999997
No 285
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.8e-34 Score=276.84 Aligned_cols=248 Identities=27% Similarity=0.414 Sum_probs=195.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||.|+||.||+|.+..+++.||+|.++.. ......+.+|+++++.+ +|++|+++++.+...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~------~~~~i~~~~~~~~~~- 74 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL------DHPNVIKYLASFIEN- 74 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC------CCCCeeeeeeeeecC-
Confidence 5799999999999999999999989999999977532 22355788999999999 788999999998753
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
+..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. ||+|+||+|+||++
T Consensus 75 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~----------- 139 (267)
T cd08224 75 ---NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFI----------- 139 (267)
T ss_pred ---CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEE-----------
Confidence 6899999999 789988875422 23478899999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||.+.....
T Consensus 140 -------------------------------------------------------------~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 140 -------------------------------------------------------------TATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred -------------------------------------------------------------CCCCcEEEeccceeeeccC
Confidence 3356799999999865432
Q ss_pred c---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 269 Q---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 269 ~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
. .....++..|+|||.+.+..++.++|+|||||++|+|++|..||..... + .....+.+...
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~---~~~~~~~~~~~------- 223 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----N---LYSLCKKIEKC------- 223 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-----c---HHHHHhhhhcC-------
Confidence 2 2234678899999999888899999999999999999999999965421 0 00011000000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCCh-hhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE-TDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+. ..+..+.++|.+||..+|++|||+.++++
T Consensus 224 ------------------------------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 224 ------------------------------DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ------------------------------CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0000111 34568889999999999999999999874
No 286
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-37 Score=329.83 Aligned_cols=257 Identities=30% Similarity=0.412 Sum_probs=211.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEech---hHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS---AAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
-|++-...||.|.||.||.|.+..+|+..|+|-++. +......+.+|+.++..+ +|||+|+++++=.+.
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l------nHpNlV~YyGVEvHR-- 1306 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL------NHPNLVRYYGVEVHR-- 1306 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc------cCccccccCceeecH--
Confidence 457777889999999999999999999999995543 334456788999999999 899999999987754
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+.++|.|||| +|+|.+++.+++- .++-..+.+..|++.|++|||++ |||||||||.||++
T Consensus 1307 --ekv~IFMEyC~~GsLa~ll~~gri--~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~L-------------- 1367 (1509)
T KOG4645|consen 1307 --EKVYIFMEYCEGGSLASLLEHGRI--EDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILL-------------- 1367 (1509)
T ss_pred --HHHHHHHHHhccCcHHHHHHhcch--hhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceee--------------
Confidence 6899999999 9999999987643 67778899999999999999997 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+..+.+|++|||.|..+..+
T Consensus 1368 ----------------------------------------------------------d~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1368 ----------------------------------------------------------DFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred ----------------------------------------------------------ecCCcEEeecccceeEecCchh
Confidence 44678999999999765432
Q ss_pred -----cccCCCCCCccChHHhhcC---CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 270 -----FAEEIQTRQYRAPEVILRA---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 270 -----~~~~~gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
.....||+.|||||++.+. .-..++||||||||+.+|+||+-||...+ ++.++...+..
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d------ne~aIMy~V~~------- 1456 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD------NEWAIMYHVAA------- 1456 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc------chhHHHhHHhc-------
Confidence 2345799999999999864 35689999999999999999999998654 22222222221
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
...+.+|..++.+.+|||.+||+.||++|+++.|+|+|-|-+...++
T Consensus 1457 ---------------------------------gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1457 ---------------------------------GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred ---------------------------------cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence 12234677789999999999999999999999999999999876554
Q ss_pred cc
Q 013220 422 RD 423 (447)
Q Consensus 422 ~~ 423 (447)
-+
T Consensus 1504 ~s 1505 (1509)
T KOG4645|consen 1504 DS 1505 (1509)
T ss_pred ch
Confidence 43
No 287
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.4e-35 Score=284.07 Aligned_cols=245 Identities=25% Similarity=0.408 Sum_probs=196.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH-hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ-FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.+|++.++||.|+||.||+|.+.. +..+|+|++..... ....+.+|+++++.+ +|+||+++++.+.. .
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~----~ 74 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL------RHKHLISLFAVCSV----G 74 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC------CCcchhheeeeEec----C
Confidence 469999999999999999999877 88999998776543 456788899999998 78999999998764 3
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...++||||+ +++|.+++.......++...+..++.|++.||+|||++ ||+|+||||+||+++
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~--------------- 138 (261)
T cd05148 75 EPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVG--------------- 138 (261)
T ss_pred CCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEc---------------
Confidence 6899999999 78999988765545688999999999999999999997 999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc---
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--- 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--- 270 (447)
....++|+|||.+.......
T Consensus 139 ---------------------------------------------------------~~~~~kl~d~g~~~~~~~~~~~~ 161 (261)
T cd05148 139 ---------------------------------------------------------EDLVCKVADFGLARLIKEDVYLS 161 (261)
T ss_pred ---------------------------------------------------------CCceEEEccccchhhcCCccccc
Confidence 35679999999986543221
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+ .......+.. +
T Consensus 162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~--~------------- 220 (261)
T cd05148 162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN------NHEVYDQITA--G------------- 220 (261)
T ss_pred cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHHh--C-------------
Confidence 12234667999999988889999999999999999998 899996542 1111111110 0
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...++.+.+++.+||+.||.+|||++++++
T Consensus 221 --------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 221 --------------------------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred --------------------------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 011123345678899999999999999999999875
No 288
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-36 Score=292.76 Aligned_cols=266 Identities=29% Similarity=0.387 Sum_probs=217.5
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
-..|+..+.||+|+||.|+-|+-..||+-||.|.+.+.. ....-..+|-.+|+.+ +.+.||.+-=+|.
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV------~s~FiVslaYAfe-- 255 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV------SSPFIVSLAYAFE-- 255 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh------ccCcEEEEeeeec--
Confidence 356899999999999999999999999999999655432 2344567899999999 5666776554554
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+.+.+|+||..| ||+|..++......+|++..++.++.+|+.||++||+. +||.||+||+|||+
T Consensus 256 --Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILL------------ 320 (591)
T KOG0986|consen 256 --TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILL------------ 320 (591)
T ss_pred --CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheee------------
Confidence 668999999999 99998877655557899999999999999999999997 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc--c
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA--N 267 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~--~ 267 (447)
+..++++|+|+|+|..+ .
T Consensus 321 ------------------------------------------------------------Dd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 321 ------------------------------------------------------------DDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred ------------------------------------------------------------ccCCCeEeeccceEEecCCC
Confidence 66889999999999754 4
Q ss_pred cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 268 KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 268 ~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
++....+||..|||||++.+..|+..+|.|||||++|+|+.|+.||.....+ +.-..+-
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK------vk~eEvd--------------- 399 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK------VKREEVD--------------- 399 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh------hhHHHHH---------------
Confidence 6667779999999999999999999999999999999999999999765211 1111111
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCcccccccCCc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~~~~~~~ 422 (447)
..++.....++...++++.+|.+.+|+.||.+|. .++++-+||||++.+=++
T Consensus 400 -----------------------rr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~r 456 (591)
T KOG0986|consen 400 -----------------------RRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRR 456 (591)
T ss_pred -----------------------HHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhH
Confidence 1122233346677789999999999999999997 578999999999987666
Q ss_pred ccccc
Q 013220 423 DETKN 427 (447)
Q Consensus 423 ~~~~~ 427 (447)
.+++.
T Consensus 457 leagm 461 (591)
T KOG0986|consen 457 LEAGM 461 (591)
T ss_pred HhccC
Confidence 65544
No 289
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.3e-35 Score=288.91 Aligned_cols=248 Identities=22% Similarity=0.299 Sum_probs=190.6
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCe--EEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSS--YVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||+|+||.||+|++..++. .+++|.++.. ......+.+|++++..+. +|+||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-----~h~~iv~~~~~~~~~- 80 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHR- 80 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-----CCCCcceEEEEECCC-
Confidence 579999999999999999999877665 4577765532 234457888999999985 689999999988753
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeE
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSR--------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nil 176 (447)
...|+||||+ +++|.+++.... ...+++..++.++.|++.||+|||++ ||+||||||+||+
T Consensus 81 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~Nil 156 (303)
T cd05088 81 ---GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNIL 156 (303)
T ss_pred ---CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEE
Confidence 6799999999 889998886432 12478889999999999999999996 9999999999999
Q ss_pred eeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccccee
Q 013220 177 LVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCK 256 (447)
Q Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 256 (447)
+ +....++
T Consensus 157 i------------------------------------------------------------------------~~~~~~k 164 (303)
T cd05088 157 V------------------------------------------------------------------------GENYVAK 164 (303)
T ss_pred e------------------------------------------------------------------------cCCCcEE
Confidence 9 3356799
Q ss_pred EeecCccccccccccc--CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 257 VVDFGNACRANKQFAE--EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 257 L~Dfg~a~~~~~~~~~--~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
|+|||++......... ...+..|+|||.+.+..++.++|||||||++|+|++ |..||...+. ......
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~--- 235 (303)
T cd05088 165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEK--- 235 (303)
T ss_pred eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh------HHHHHH---
Confidence 9999998643222111 223567999999988888999999999999999998 9999965421 111000
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
..... ....+...+..+.+||.+||+.+|++||+++++|.+
T Consensus 236 ~~~~~--------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 236 LPQGY--------------------------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HhcCC--------------------------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00000 001122345678899999999999999999999976
No 290
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.4e-34 Score=275.59 Aligned_cols=249 Identities=29% Similarity=0.465 Sum_probs=199.1
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+|++.++||.|+||.||++.+..+++.+++|.+.... .....+.+|+++++.+ .|+||+++++.+...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~--- 71 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV------NHPNIISYKEAFLDG--- 71 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC------CCCCchhhhhhhccC---
Confidence 5899999999999999999999999999999876532 2344667899999988 788999999988753
Q ss_pred cceEEEEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...++||||+ +++|.+.+.... ...+++..+..++.|++.||+|||+. |++|+||+|+||+++.
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~----------- 138 (256)
T cd08530 72 -NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVA----------- 138 (256)
T ss_pred -CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEec-----------
Confidence 7899999999 888988775422 24578889999999999999999996 9999999999999943
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
...++|+|||.+.......
T Consensus 139 -------------------------------------------------------------~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 139 -------------------------------------------------------------NDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred -------------------------------------------------------------CCcEEEeeccchhhhccCC
Confidence 4569999999986554332
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+ ......... .+..
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~-~~~~----------- 218 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-------MQDLRYKVQ-RGKY----------- 218 (256)
T ss_pred cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHh-cCCC-----------
Confidence 23467889999999988889999999999999999999999996542 111100000 0000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
...+...+.++.++|.+||+.+|++|||+.++++||++
T Consensus 219 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 219 ----------------------------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred ----------------------------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 01223446689999999999999999999999999985
No 291
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8.4e-35 Score=277.24 Aligned_cols=241 Identities=27% Similarity=0.410 Sum_probs=194.3
Q ss_pred EeecccCceEEEEEEeCCC---CeEEEEEEechhHHh--HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTRT---SSYVALKIQKSAAQF--AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.||+|+||.||+|.+... +..|++|++...... .+.+.+|+++++.+ .|++|+++++++.. +..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~----~~~ 70 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL------GHPNVVRLLGVCTE----EEP 70 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc------CCCChheeeeeecC----CCc
Confidence 4689999999999998865 899999988765433 56788999999999 78999999998875 468
Q ss_pred EEEEEecc-cccHHHHHHhhc-------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 117 LCMVLEFL-GDSLLRLIKYSR-------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~-------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
.+++|||+ +++|.+.+.... ...+++..+..++.|++.||+|||++ |++|+||+|+||++
T Consensus 71 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili----------- 138 (262)
T cd00192 71 LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLV----------- 138 (262)
T ss_pred eEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEE-----------
Confidence 99999999 899999886541 24589999999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||.+.....
T Consensus 139 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 139 -------------------------------------------------------------GEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred -------------------------------------------------------------CCCCcEEEccccccccccc
Confidence 3356799999999976543
Q ss_pred c-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 269 Q-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 269 ~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
. .....++..|+|||.+....++.++|||||||++|+|++ |..||...+ .......+..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~--------- 222 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------NEEVLEYLRK--------- 222 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc---------
Confidence 2 233456889999999988889999999999999999998 699997542 1111111110
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
......+...+.++.+++.+||+.||.+|||+.|++++
T Consensus 223 --------------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 223 --------------------------------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred --------------------------------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 01112334456789999999999999999999999875
No 292
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.2e-35 Score=285.67 Aligned_cols=248 Identities=21% Similarity=0.362 Sum_probs=192.6
Q ss_pred cCCceEEEEeecccCceEEEEEEe-----CCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYD-----TRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
+...|.+.+.||+|+||.||++.+ ..++..+|+|.+... ......+.+|+++++.+ .|++|+++++++
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~ 76 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL------QHEHIVKFYGVC 76 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC------CCCCcceEEEEE
Confidence 457899999999999999999975 234667999987643 33355788999999999 789999999988
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc-----------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCe
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR-----------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENI 175 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~-----------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Ni 175 (447)
.. +...++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ |++||||||+||
T Consensus 77 ~~----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Ni 151 (288)
T cd05093 77 VE----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNC 151 (288)
T ss_pred ec----CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceE
Confidence 74 36899999999 889988875432 12388999999999999999999997 999999999999
Q ss_pred EeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccce
Q 013220 176 LLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRC 255 (447)
Q Consensus 176 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (447)
++ +....+
T Consensus 152 li------------------------------------------------------------------------~~~~~~ 159 (288)
T cd05093 152 LV------------------------------------------------------------------------GENLLV 159 (288)
T ss_pred EE------------------------------------------------------------------------ccCCcE
Confidence 99 335679
Q ss_pred eEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHH
Q 013220 256 KVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLA 329 (447)
Q Consensus 256 kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~ 329 (447)
+|+|||.+....... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... ......
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~------~~~~~~ 233 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------NNEVIE 233 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHH
Confidence 999999987543221 12234678999999988889999999999999999998 899986542 111111
Q ss_pred HHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHH
Q 013220 330 LMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC 409 (447)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~el 409 (447)
.+.. +.. ...+...+.++.+|+.+||+.||.+|||+.++
T Consensus 234 ~i~~--~~~---------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v 272 (288)
T cd05093 234 CITQ--GRV---------------------------------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEI 272 (288)
T ss_pred HHHc--CCc---------------------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 1100 000 01122345678999999999999999999998
Q ss_pred hc
Q 013220 410 LQ 411 (447)
Q Consensus 410 L~ 411 (447)
++
T Consensus 273 ~~ 274 (288)
T cd05093 273 HS 274 (288)
T ss_pred HH
Confidence 54
No 293
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=5e-35 Score=277.91 Aligned_cols=239 Identities=32% Similarity=0.478 Sum_probs=195.8
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
||.|+||.||++.+..+++.||+|++..... ....+.+|+++++.+ .|++|+++++.+.. +...++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~----~~~~~~ 70 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI------NHPFIVKLHYAFQT----EEKLYL 70 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc------CCCcHHHHHHHeec----CCeeEE
Confidence 6999999999999988899999998765432 345788899999999 78999999988864 478999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
+|||+ +++|.+.+.... .+++..+..++.|++.||.|||+. +++|+||+|+||++.
T Consensus 71 v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~-------------------- 127 (250)
T cd05123 71 VLEYAPGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLD-------------------- 127 (250)
T ss_pred EEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEc--------------------
Confidence 99999 889998886543 488999999999999999999996 999999999999993
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cccCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQ 275 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~~g 275 (447)
....++|+|||.+...... .....+
T Consensus 128 ----------------------------------------------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (250)
T cd05123 128 ----------------------------------------------------ADGHIKLTDFGLAKELSSEGSRTNTFCG 155 (250)
T ss_pred ----------------------------------------------------CCCcEEEeecCcceecccCCCcccCCcC
Confidence 3567999999998755432 334567
Q ss_pred CCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcc
Q 013220 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 355 (447)
Q Consensus 276 t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (447)
+..|+|||.+.+...+.++|+||||+++|++++|..||...+ .......+
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~------~~~~~~~~------------------------ 205 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED------RKEIYEKI------------------------ 205 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHH------------------------
Confidence 889999999988888999999999999999999999996542 11111111
Q ss_pred cchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh---HHHhcCccc
Q 013220 356 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA---QQCLQHPWL 415 (447)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta---~elL~hp~f 415 (447)
......++...+..+.++|.+||..||++|||+ +++++||||
T Consensus 206 ------------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 206 ------------------LKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ------------------hcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 111222444457788999999999999999999 999999998
No 294
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=281.73 Aligned_cols=247 Identities=19% Similarity=0.309 Sum_probs=190.8
Q ss_pred CceEEEEeecccCceEEEEEEeC----CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDT----RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
..|++.++||+|+||+||+|... ..+..|++|.++... .....+.+|+++++.+ .|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~ 78 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL------HHPNIVCLLGVVTQ 78 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC------CCCCeeeEEEEEec
Confidence 46999999999999999999853 456789999876322 2335678899999999 78999999998764
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhc---------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSR---------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~---------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
+...|+||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ ||+|+||||+
T Consensus 79 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~ 153 (283)
T cd05090 79 ----EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAAR 153 (283)
T ss_pred ----CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-Ceehhccccc
Confidence 46899999999 788988874321 12367888899999999999999997 9999999999
Q ss_pred CeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc
Q 013220 174 NILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM 253 (447)
Q Consensus 174 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (447)
||++. ...
T Consensus 154 nili~------------------------------------------------------------------------~~~ 161 (283)
T cd05090 154 NILIG------------------------------------------------------------------------EQL 161 (283)
T ss_pred eEEEc------------------------------------------------------------------------CCC
Confidence 99993 355
Q ss_pred ceeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHH
Q 013220 254 RCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDH 327 (447)
Q Consensus 254 ~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~ 327 (447)
.++|+|||++...... .....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+ ....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~------~~~~ 235 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS------NQEV 235 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------HHHH
Confidence 6999999999654321 122345677999999988889999999999999999998 988986542 1111
Q ss_pred HHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChH
Q 013220 328 LALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 328 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
+..+.. . .....+...+..+.+++.+||+.||++||++.
T Consensus 236 ~~~~~~---~--------------------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 274 (283)
T cd05090 236 IEMVRK---R--------------------------------------QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFK 274 (283)
T ss_pred HHHHHc---C--------------------------------------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHH
Confidence 111110 0 00112334566889999999999999999999
Q ss_pred HHhcC
Q 013220 408 QCLQH 412 (447)
Q Consensus 408 elL~h 412 (447)
+++++
T Consensus 275 ~i~~~ 279 (283)
T cd05090 275 DIHTR 279 (283)
T ss_pred HHHHH
Confidence 99865
No 295
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2.8e-35 Score=279.05 Aligned_cols=228 Identities=26% Similarity=0.320 Sum_probs=181.8
Q ss_pred cCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-c
Q 013220 47 GQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-G 125 (447)
Q Consensus 47 G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~ 125 (447)
|.+|.||++++..+++.||+|.+..... ...|...+... .|+||+++++++.. .+..+++|||+ +
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~------~~~~i~~~~~~~~~----~~~~~lv~e~~~~ 69 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPH------CVPNMVCLHKYIVS----EDSVFLVLQHAEG 69 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhc------CCCceeehhhheec----CCeEEEEEecCCC
Confidence 8999999999999999999998876532 23333333332 68999999998875 37899999999 7
Q ss_pred ccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCC
Q 013220 126 DSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSING 205 (447)
Q Consensus 126 ~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (447)
++|.+.+... ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 70 ~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~---------------------------- 118 (237)
T cd05576 70 GKLWSHISKF--LNIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILL---------------------------- 118 (237)
T ss_pred CCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEE----------------------------
Confidence 8998887654 3489999999999999999999996 99999999999999
Q ss_pred CCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccCCCCCCccChHHh
Q 013220 206 GSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVI 285 (447)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~l 285 (447)
+....++++|||.+...........++..|+|||.+
T Consensus 119 --------------------------------------------~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~ 154 (237)
T cd05576 119 --------------------------------------------DDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVG 154 (237)
T ss_pred --------------------------------------------cCCCCEEEecccchhccccccccCCcCccccCCccc
Confidence 335669999999886655544455667889999999
Q ss_pred hcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhc
Q 013220 286 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL 365 (447)
Q Consensus 286 ~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (447)
.+..++.++|+||+||++|+|++|..||...... +. .
T Consensus 155 ~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------------------~~-----------~---------- 191 (237)
T cd05576 155 GISEETEACDWWSLGAILFELLTGKTLVECHPSG----------------------IN-----------T---------- 191 (237)
T ss_pred CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------------------cc-----------c----------
Confidence 8888899999999999999999999887532100 00 0
Q ss_pred ccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-----HHHhcCccc
Q 013220 366 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWL 415 (447)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta-----~elL~hp~f 415 (447)
.....++...+..+.+||.+||+.||.+|||+ +++++||||
T Consensus 192 ---------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 192 ---------HTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ---------ccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 00011233456688999999999999999996 999999998
No 296
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.4e-35 Score=281.07 Aligned_cols=245 Identities=22% Similarity=0.353 Sum_probs=192.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
.+|++.+.||+|+||.||+|.+. ++..+|+|++.........+.+|+++++.+ .|+||+++++.+... .
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~----~ 72 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKL------SHPNLVQLYGVCTKQ----R 72 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhC------CCCCEEEEEEEEcCC----C
Confidence 46899999999999999999875 466899998875544456788899999998 789999999987643 6
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i----------------- 133 (256)
T cd05059 73 PIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLV----------------- 133 (256)
T ss_pred ceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEE-----------------
Confidence 799999999 889998886533 3578999999999999999999996 99999999999999
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-cC
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-EE 273 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~ 273 (447)
+..+.++|+|||.+........ ..
T Consensus 134 -------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 134 -------------------------------------------------------GEDNVVKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred -------------------------------------------------------CCCCcEEECCcccceeccccccccc
Confidence 3356799999998864432211 11
Q ss_pred ---CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 274 ---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 274 ---~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
.++..|+|||.+.+..++.++|+|||||++|++++ |..||...+ .......+.. ..
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~---~~----------- 218 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS------NSEVVESVSA---GY----------- 218 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC------HHHHHHHHHc---CC-----------
Confidence 22357999999998889999999999999999998 899986542 1111111100 00
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+.++.+++.+||..+|++|||+.++++.
T Consensus 219 ---------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 219 ---------------------------RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ---------------------------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 011223346789999999999999999999999864
No 297
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-34 Score=282.47 Aligned_cols=255 Identities=24% Similarity=0.378 Sum_probs=199.3
Q ss_pred ceEEEEeecccCceEEEEEEeC---CCCeEEEEEEechhH-----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDT---RTSSYVALKIQKSAA-----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
.|++.+.||.|+||.||+|++. .++..||+|+++... ...+.+.+|+++++.+. +|++|+++++.+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QSPFLVTLHYAFQ 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc-----cCCChhceeeEee
Confidence 4899999999999999999874 478999999887532 23456788999999985 6899999998887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
. +...++||||+ +++|.+.+... ..+++..+..++.|++.||+|||+. |++||||+|+||++
T Consensus 76 ~----~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~---------- 138 (290)
T cd05613 76 T----DTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILL---------- 138 (290)
T ss_pred c----CCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEE----------
Confidence 4 36899999999 78998887654 3588999999999999999999996 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+.+..++|+|||++....
T Consensus 139 --------------------------------------------------------------~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 139 --------------------------------------------------------------DSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred --------------------------------------------------------------CCCCCEEEeeCccceecc
Confidence 335679999999986543
Q ss_pred cc----cccCCCCCCccChHHhhcC--CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 268 KQ----FAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 268 ~~----~~~~~gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
.. .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...... .....+.+
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~------~~~~~~~~-------- 222 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK------NSQAEISR-------- 222 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc------ccHHHHHH--------
Confidence 21 1234578999999998753 4678999999999999999999999643211 00111111
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC-----ChHHHhcCcccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLS 416 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp-----ta~elL~hp~f~ 416 (447)
.+......++...+..+.+|+.+||+.||++|| ++++++.||||.
T Consensus 223 ------------------------------~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 272 (290)
T cd05613 223 ------------------------------RILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQ 272 (290)
T ss_pred ------------------------------HhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccc
Confidence 011111123344566888999999999999997 899999999999
Q ss_pred ccc
Q 013220 417 LRN 419 (447)
Q Consensus 417 ~~~ 419 (447)
..+
T Consensus 273 ~~~ 275 (290)
T cd05613 273 KIN 275 (290)
T ss_pred cCC
Confidence 865
No 298
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.7e-35 Score=287.37 Aligned_cols=253 Identities=27% Similarity=0.383 Sum_probs=198.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
..|...+.||+|+||.||+|++..++..+|+|.+... ......+.+|+++++.+ +|++++++++++...
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~- 87 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL------RHPNTIQYRGCYLRE- 87 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC------CCCCcccEEEEEEcC-
Confidence 4588889999999999999999989999999986532 22344677899999999 788999999988753
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...++||||+.+++.+.+.... ..+++..+..++.|++.||.|||++ +++||||+|+||++
T Consensus 88 ---~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~-------------- 148 (308)
T cd06634 88 ---HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILL-------------- 148 (308)
T ss_pred ---CeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEE--------------
Confidence 6899999999777777665432 4588999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 271 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~ 271 (447)
+....++|+|||.+..... ..
T Consensus 149 ----------------------------------------------------------~~~~~~kl~dfg~~~~~~~-~~ 169 (308)
T cd06634 149 ----------------------------------------------------------SEPGLVKLGDFGSASIMAP-AN 169 (308)
T ss_pred ----------------------------------------------------------CCCCcEEECCcccceeecC-cc
Confidence 3356799999998865433 23
Q ss_pred cCCCCCCccChHHhhc---CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHh-CCCCHHhhhCCC
Q 013220 272 EEIQTRQYRAPEVILR---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI-GKMPRKIAIGGA 347 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~ 347 (447)
...++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+ . ...+.... +..+.
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~---~~~~~~~~~~~~~~------- 233 (308)
T cd06634 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------A---MSALYHIAQNESPA------- 233 (308)
T ss_pred cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc------H---HHHHHHHhhcCCCC-------
Confidence 4567899999999853 457889999999999999999999986432 0 11111110 00000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
......+..+.+||.+||+.+|++|||++++++|||+.....
T Consensus 234 -------------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 234 -------------------------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred -------------------------------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 011234567899999999999999999999999999987543
No 299
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-34 Score=282.68 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=193.8
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCC-----CeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRT-----SSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
+..++|++.+.||+|+||.||+|.+... ...+|+|.+... ......+.+|+++++.+. +|+||+++++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~ 83 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLG 83 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-----CCCCeeeEEE
Confidence 3457899999999999999999987643 378999987653 233456888999999884 6899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhh--------------ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYS--------------RYKGLELNKVREICKYILTGLDYLHRELGIIHTDL 170 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~--------------~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Di 170 (447)
++... ..++++|||+ +++|..++... ....+++..+..++.|++.||+|||++ ||+||||
T Consensus 84 ~~~~~----~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dl 158 (293)
T cd05053 84 VCTQE----GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDL 158 (293)
T ss_pred EEcCC----CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-Ccccccc
Confidence 88753 5799999999 88998888542 123478889999999999999999996 9999999
Q ss_pred CCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCC
Q 013220 171 KPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG 250 (447)
Q Consensus 171 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (447)
||+||++.
T Consensus 159 kp~Nil~~------------------------------------------------------------------------ 166 (293)
T cd05053 159 AARNVLVT------------------------------------------------------------------------ 166 (293)
T ss_pred ceeeEEEc------------------------------------------------------------------------
Confidence 99999993
Q ss_pred cccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCc
Q 013220 251 IDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCED 324 (447)
Q Consensus 251 ~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~ 324 (447)
.+..++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.... .
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~ 240 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------V 240 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC------H
Confidence 35679999999987543321 11224567999999988889999999999999999997 999986542 1
Q ss_pred hHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC
Q 013220 325 EDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 404 (447)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp 404 (447)
......+.. + .....+...+..+.+|+.+||..||++||
T Consensus 241 ~~~~~~~~~--~---------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 279 (293)
T cd05053 241 EELFKLLKE--G---------------------------------------YRMEKPQNCTQELYHLMRDCWHEVPSQRP 279 (293)
T ss_pred HHHHHHHHc--C---------------------------------------CcCCCCCCCCHHHHHHHHHHcccCcccCc
Confidence 111111100 0 00112334466889999999999999999
Q ss_pred ChHHHhcC
Q 013220 405 TAQQCLQH 412 (447)
Q Consensus 405 ta~elL~h 412 (447)
|+.+++++
T Consensus 280 s~~eil~~ 287 (293)
T cd05053 280 TFKQLVED 287 (293)
T ss_pred CHHHHHHH
Confidence 99999875
No 300
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.3e-35 Score=279.22 Aligned_cols=249 Identities=25% Similarity=0.357 Sum_probs=194.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||.|+||.||+|++..++..||+|.+... ......+.+|+++++.+ +|+||+++++.+..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~-- 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL------NHPNVIKYYASFIE-- 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc------cCCchhhhhheeEe--
Confidence 4799999999999999999999889999999976532 23345778899999998 78999999998875
Q ss_pred CCcceEEEEEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
+...+++|||+ +++|.+++... ....+++..+..++.|++.||+|||+. |++|+||||+||++.
T Consensus 74 --~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~---------- 140 (267)
T cd08229 74 --DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFIT---------- 140 (267)
T ss_pred --CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEc----------
Confidence 36899999999 78898887542 123478899999999999999999996 999999999999993
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
....++|+|||.+.....
T Consensus 141 --------------------------------------------------------------~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 141 --------------------------------------------------------------ATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred --------------------------------------------------------------CCCCEEECcchhhhcccc
Confidence 355799999998864432
Q ss_pred c---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 269 Q---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 269 ~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
. .....++..|+|||.+.+..++.++|+||||+++|+|++|..||..... + .....+.+....
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~---~~~~~~~~~~~~------ 224 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----N---LYSLCKKIEQCD------ 224 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-----h---HHHHhhhhhcCC------
Confidence 2 1234688999999999888899999999999999999999999965421 0 000000000000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.++|.+||+.||++|||+.++++
T Consensus 225 ------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 225 ------------------------------YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------------------------------CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 000011234678999999999999999999997763
No 301
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.5e-34 Score=279.84 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=190.1
Q ss_pred CCceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.++||+|+||.||+|.+. .++..||+|.+.... .....+.+|+.+++.+ +|+||+++++.+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l------~~~~iv~~~~~~ 78 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF------NCHHVVRLLGVV 78 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCeeeEEEEE
Confidence 478999999999999999999764 235789999875432 2344678899999988 789999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhcc--------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEee
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY--------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~--------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
.. +...++||||+ +++|.+++..... ..++...+..++.|++.||+|||+. |++|+||||+||++
T Consensus 79 ~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil~- 152 (277)
T cd05062 79 SQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMV- 152 (277)
T ss_pred cC----CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEEE-
Confidence 64 36899999999 8899888754321 1246678889999999999999996 99999999999999
Q ss_pred ecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEe
Q 013220 179 STIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVV 258 (447)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~ 258 (447)
+....++|+
T Consensus 153 -----------------------------------------------------------------------~~~~~~~l~ 161 (277)
T cd05062 153 -----------------------------------------------------------------------AEDFTVKIG 161 (277)
T ss_pred -----------------------------------------------------------------------cCCCCEEEC
Confidence 335679999
Q ss_pred ecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHH
Q 013220 259 DFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMM 332 (447)
Q Consensus 259 Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~ 332 (447)
|||++....... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... .......+.
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~------~~~~~~~~~ 235 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS------NEQVLRFVM 235 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHH
Confidence 999986443211 12245678999999998889999999999999999998 688886542 111111111
Q ss_pred HHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 333 ELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
. +. ....+...+..+.+++.+||+.||++|||+.|++++
T Consensus 236 ~--~~---------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 236 E--GG---------------------------------------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred c--CC---------------------------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 00 001223346688999999999999999999999864
No 302
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.2e-34 Score=279.22 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=187.8
Q ss_pred EEEEeecccCceEEEEEEeCCCCe--EEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC-
Q 013220 39 IAQRKLGWGQFSIVWLAYDTRTSS--YVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP- 112 (447)
Q Consensus 39 ~l~~~lG~G~~g~Vy~a~~~~~~~--~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~- 112 (447)
.+.+.||+|+||.||+|++..++. .+|+|.++.. ....+.+..|+++++.+ +|+||+++++.+.....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~~ 75 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF------DHPNVMRLIGVCLQTVES 75 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC------CCCCcceEEEEEccCCcc
Confidence 467889999999999998876664 6899987543 33356788899999998 78999999987654321
Q ss_pred -CcceEEEEEecc-cccHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCC
Q 013220 113 -NGQHLCMVLEFL-GDSLLRLIKYSR----YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186 (447)
Q Consensus 113 -~~~~~~lvmE~~-~~~L~~~~~~~~----~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~ 186 (447)
.....+++|||+ +++|.+.+.... ...+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~--------- 145 (272)
T cd05075 76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCML--------- 145 (272)
T ss_pred cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEE---------
Confidence 223689999999 788887764322 23478899999999999999999996 99999999999999
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc
Q 013220 187 PIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA 266 (447)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~ 266 (447)
+....++|+|||++...
T Consensus 146 ---------------------------------------------------------------~~~~~~kl~Dfg~~~~~ 162 (272)
T cd05075 146 ---------------------------------------------------------------NENMNVCVADFGLSKKI 162 (272)
T ss_pred ---------------------------------------------------------------cCCCCEEECCCCccccc
Confidence 33567999999998754
Q ss_pred ccccc-----cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 267 NKQFA-----EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 267 ~~~~~-----~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
..... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.... .......+.. +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~--~---- 230 (272)
T cd05075 163 YNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE------NSEIYDYLRQ--G---- 230 (272)
T ss_pred CcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHc--C----
Confidence 33211 1235678999999988889999999999999999998 788986532 1111110000 0
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.....+...+..+.++|.+||+.||++|||+.+++++
T Consensus 231 -----------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 231 -----------------------------------NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -----------------------------------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0001223345678999999999999999999999864
No 303
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.9e-34 Score=285.24 Aligned_cols=255 Identities=28% Similarity=0.393 Sum_probs=199.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
..|...+.||+|+||.||+|++..++..||+|.+... ......+.+|+++++.+ +|+|++++++++...
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~- 97 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI------KHPNSIEYKGCYLRE- 97 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC------CCCCEEEEEEEEeeC-
Confidence 3488899999999999999999989999999987532 22345678899999998 788999999988753
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...++||||+.+++.+.+.... ..+++..+..++.|++.||.|||++ ||+|+||+|+||++
T Consensus 98 ---~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~-------------- 158 (317)
T cd06635 98 ---HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILL-------------- 158 (317)
T ss_pred ---CeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEE--------------
Confidence 6799999999778877765432 4588999999999999999999996 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 271 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~ 271 (447)
+....++|+|||.+..... ..
T Consensus 159 ----------------------------------------------------------~~~~~~kl~dfg~~~~~~~-~~ 179 (317)
T cd06635 159 ----------------------------------------------------------TEPGQVKLADFGSASIASP-AN 179 (317)
T ss_pred ----------------------------------------------------------CCCCCEEEecCCCccccCC-cc
Confidence 3356799999998764332 23
Q ss_pred cCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 272 EEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
...++..|+|||.+. ...++.++|+|||||++|+|++|..||...+ .......+.. +..+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~--~~~~--------- 242 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQ--NESP--------- 242 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHh--ccCC---------
Confidence 456788999999984 3457899999999999999999999986542 1111111100 0000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
.......+..+.+||.+||+.+|.+|||+.++++|+|+......
T Consensus 243 -----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 243 -----------------------------TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred -----------------------------CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence 00112345678999999999999999999999999999765443
No 304
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=9e-35 Score=290.98 Aligned_cols=251 Identities=26% Similarity=0.372 Sum_probs=190.7
Q ss_pred CCceEEEEeecccCceEEEEEEe-----CCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYD-----TRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.+.||.|+||.||+|.+ ..+++.||+|+++.+. .....+.+|++++..+. +|+||+++++++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~~ 80 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLLGAC 80 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc-----CCccHhhhccee
Confidence 47899999999999999999974 3457899999887532 23456888999999985 689999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc--------------------------------------------------
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR-------------------------------------------------- 136 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~-------------------------------------------------- 136 (447)
... +...+++|||| +++|.+++....
T Consensus 81 ~~~---~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (343)
T cd05103 81 TKP---GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKS 157 (343)
T ss_pred ecC---CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCc
Confidence 643 35789999999 889988875421
Q ss_pred ---------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCC
Q 013220 137 ---------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEG 201 (447)
Q Consensus 137 ---------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 201 (447)
...++...+..++.|++.||+|||++ ||+||||||+||++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~----------------------- 213 (343)
T cd05103 158 LSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLS----------------------- 213 (343)
T ss_pred cccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEc-----------------------
Confidence 01256777888999999999999996 999999999999993
Q ss_pred CCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-----ccCCCC
Q 013220 202 SINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQT 276 (447)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt 276 (447)
....++|+|||++....... ....++
T Consensus 214 -------------------------------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd05103 214 -------------------------------------------------ENNVVKICDFGLARDIYKDPDYVRKGDARLP 244 (343)
T ss_pred -------------------------------------------------CCCcEEEEecccccccccCcchhhcCCCCCC
Confidence 35679999999986542211 112345
Q ss_pred CCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcc
Q 013220 277 RQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 355 (447)
Q Consensus 277 ~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (447)
..|+|||.+.+..++.++|||||||++|+|++ |..||..... .......+ . .+.
T Consensus 245 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~-~-~~~------------------ 299 (343)
T cd05103 245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-----DEEFCRRL-K-EGT------------------ 299 (343)
T ss_pred cceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc-----cHHHHHHH-h-ccC------------------
Confidence 67999999988889999999999999999996 8999865421 11110000 0 000
Q ss_pred cchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 356 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+..+.+++.+||+.||++|||+.++++|
T Consensus 300 ---------------------~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 300 ---------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ---------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 001122234578899999999999999999999976
No 305
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.3e-34 Score=280.19 Aligned_cols=255 Identities=29% Similarity=0.400 Sum_probs=196.8
Q ss_pred ceEEEEeecccCceEEEEEEeC---CCCeEEEEEEechhH-----HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDT---RTSSYVALKIQKSAA-----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
+|++.+.||+|++|.||+|++. .++..||+|+++... .....+.+|+++++.+. +|++|+++++.+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~~~~i~~~~~~~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLHYAFQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc-----CCcchhhhheeee
Confidence 4899999999999999999754 457889999886432 23456778999999885 6899999998886
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
. +...++||||+ +++|...+... ..+++..++.++.|++.||+|||+. |++|+||+|+||++
T Consensus 76 ~----~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~---------- 138 (288)
T cd05583 76 T----DTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILL---------- 138 (288)
T ss_pred c----CCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEE----------
Confidence 4 46899999999 78888877543 3488999999999999999999996 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+....++|+|||++....
T Consensus 139 --------------------------------------------------------------~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 139 --------------------------------------------------------------DSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred --------------------------------------------------------------CCCCCEEEEECccccccc
Confidence 335679999999886433
Q ss_pred ccc----ccCCCCCCccChHHhhcCC--CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 268 KQF----AEEIQTRQYRAPEVILRAG--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 268 ~~~----~~~~gt~~y~aPE~l~~~~--~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
... ....++..|+|||.+.+.. .+.++|+||||+++|+|++|..||....... .. ..+.+
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~---~~~~~-------- 222 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN---SQ---SEISR-------- 222 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc---hH---HHHHH--------
Confidence 221 1235789999999987654 6789999999999999999999996432110 00 00000
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC---hHHHhcCcccccc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHPWLSLR 418 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt---a~elL~hp~f~~~ 418 (447)
.+.......+...+..+.++|.+||+.||++||| +.++|+||||+..
T Consensus 223 ------------------------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 223 ------------------------------RILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred ------------------------------HHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 0111112233445668899999999999999998 5677999999876
Q ss_pred c
Q 013220 419 N 419 (447)
Q Consensus 419 ~ 419 (447)
.
T Consensus 273 ~ 273 (288)
T cd05583 273 D 273 (288)
T ss_pred C
Confidence 4
No 306
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.2e-34 Score=283.79 Aligned_cols=248 Identities=21% Similarity=0.294 Sum_probs=190.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCe--EEEEEEech--hHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSS--YVALKIQKS--AAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~--~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.+.||+|+||.||+|++..++. .+++|.++. .....+.+.+|++++.++. +|+||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~~~~~- 75 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG-----HHPNIINLLGACENR- 75 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc-----CCCchhheEEEEccC-
Confidence 479999999999999999998876654 468887763 2233457888999998885 689999999988753
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeE
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSR--------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nil 176 (447)
...+++|||+ +++|.+++.... ...+++..+..++.|++.||+|||++ ||+||||||+||+
T Consensus 76 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil 151 (297)
T cd05089 76 ---GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARNVL 151 (297)
T ss_pred ---CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcceEE
Confidence 5799999999 789998885432 12478889999999999999999996 9999999999999
Q ss_pred eeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccccee
Q 013220 177 LVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCK 256 (447)
Q Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 256 (447)
+ +.+..++
T Consensus 152 l------------------------------------------------------------------------~~~~~~k 159 (297)
T cd05089 152 V------------------------------------------------------------------------GENLASK 159 (297)
T ss_pred E------------------------------------------------------------------------CCCCeEE
Confidence 9 3356789
Q ss_pred EeecCcccccccccccC--CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHH
Q 013220 257 VVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMME 333 (447)
Q Consensus 257 L~Dfg~a~~~~~~~~~~--~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 333 (447)
|+|||++.......... ..+..|+|||.+.+..++.++|||||||++|+|++ |..||...+ .......+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~------~~~~~~~~-- 231 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT------CAELYEKL-- 231 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHH--
Confidence 99999986433322222 22457999999988889999999999999999997 999996542 11111110
Q ss_pred HhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 334 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
... .....+..++..+.+||.+||+.+|.+|||++++++.
T Consensus 232 -~~~--------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 232 -PQG--------------------------------------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred -hcC--------------------------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000 0011223456688999999999999999999999765
No 307
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-34 Score=313.02 Aligned_cols=249 Identities=23% Similarity=0.339 Sum_probs=192.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.++||+|+||.||+|++..+++.||+|++... ....+.+.+|+++++.+ .|+||+++++++..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L------~HPNIVkl~~v~~d-- 73 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL------IHPGIVPVYSICSD-- 73 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC------CCcCcCeEEEEEee--
Confidence 6899999999999999999999999999999987643 23345788899999999 78999999998874
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhcc---------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRY---------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTI 181 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~---------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~ 181 (447)
++..+++|||+ |++|.+++..... ..++...+..++.||+.||+|||++ ||+||||||+||++
T Consensus 74 --~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILL---- 146 (932)
T PRK13184 74 --GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILL---- 146 (932)
T ss_pred --CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEE----
Confidence 36899999999 8899888754211 2245567788999999999999996 99999999999999
Q ss_pred CCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecC
Q 013220 182 DPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFG 261 (447)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg 261 (447)
+..+.++|+|||
T Consensus 147 --------------------------------------------------------------------d~dg~vKLiDFG 158 (932)
T PRK13184 147 --------------------------------------------------------------------GLFGEVVILDWG 158 (932)
T ss_pred --------------------------------------------------------------------cCCCCEEEEecC
Confidence 345679999999
Q ss_pred ccccccc---------------------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCC
Q 013220 262 NACRANK---------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQG 320 (447)
Q Consensus 262 ~a~~~~~---------------------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~ 320 (447)
++..... .....+||+.|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9865410 0112468999999999999899999999999999999999999997542110
Q ss_pred CCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCC
Q 013220 321 FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTP 400 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP 400 (447)
+ .....-..|.. ..-...++..+.+++.+||+.||
T Consensus 239 -------i--~~~~~i~~P~~------------------------------------~~p~~~iP~~L~~LI~rcL~~DP 273 (932)
T PRK13184 239 -------I--SYRDVILSPIE------------------------------------VAPYREIPPFLSQIAMKALAVDP 273 (932)
T ss_pred -------h--hhhhhccChhh------------------------------------ccccccCCHHHHHHHHHHccCCh
Confidence 0 00000000000 00012345678899999999999
Q ss_pred CCCCChHHHhcC
Q 013220 401 EKRPTAQQCLQH 412 (447)
Q Consensus 401 ~kRpta~elL~h 412 (447)
++|++..+.|.+
T Consensus 274 ~kR~ss~eeLl~ 285 (932)
T PRK13184 274 AERYSSVQELKQ 285 (932)
T ss_pred hhCcCHHHHHHH
Confidence 999887666544
No 308
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=283.34 Aligned_cols=263 Identities=18% Similarity=0.211 Sum_probs=185.6
Q ss_pred cCccccCCceEEEEeecccCceEEEEEEeCCC---CeEEEEEEechhHHh--HH-H------HHHHHHHHHHhhcCCCCC
Q 013220 29 VGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRT---SSYVALKIQKSAAQF--AQ-A------ALHEIEVLSAVADGDPSN 96 (447)
Q Consensus 29 ~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~--~~-~------~~~E~~~l~~l~~~~~~~ 96 (447)
++++.+ ++|++.++||+|+||+||+|.+..+ +..+|+|+....... .+ . ...++..+..+. ...
T Consensus 6 ~~~i~~-~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~---~~~ 81 (294)
T PHA02882 6 LIDITG-KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIH---NID 81 (294)
T ss_pred eeccCC-CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhc---cCC
Confidence 455554 7999999999999999999998777 678888864322210 00 0 011222222222 237
Q ss_pred cceeeeecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeE
Q 013220 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176 (447)
Q Consensus 97 ~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nil 176 (447)
|++|++++++...........+++|+++...+.+.+... ...++..+..++.|++.||+|||++ +|+||||||+|||
T Consensus 82 h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nil 158 (294)
T PHA02882 82 HLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIM 158 (294)
T ss_pred CCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEE
Confidence 899999998765443233467889999877777666543 2357888999999999999999996 9999999999999
Q ss_pred eeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccccee
Q 013220 177 LVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCK 256 (447)
Q Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 256 (447)
+ +....++
T Consensus 159 l------------------------------------------------------------------------~~~~~~~ 166 (294)
T PHA02882 159 V------------------------------------------------------------------------DGNNRGY 166 (294)
T ss_pred E------------------------------------------------------------------------cCCCcEE
Confidence 9 3356789
Q ss_pred EeecCccccccc----------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchH
Q 013220 257 VVDFGNACRANK----------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDED 326 (447)
Q Consensus 257 L~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~ 326 (447)
|+|||+|..... ......||+.|+|||.+.+..++.++|||||||++|+|++|..||....... .
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-----~ 241 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-----N 241 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-----H
Confidence 999999864421 1122368999999999999899999999999999999999999997653111 1
Q ss_pred HHHHH-HHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC
Q 013220 327 HLALM-MELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT 405 (447)
Q Consensus 327 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt 405 (447)
.+... .+.+. .+..... .....+..+.+++..|+..+|++||+
T Consensus 242 ~~~~~~~~~~~-----------------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~rp~ 285 (294)
T PHA02882 242 LIHAAKCDFIK-----------------------------------RLHEGKI-KIKNANKFIYDFIECVTKLSYEEKPD 285 (294)
T ss_pred HHHHhHHHHHH-----------------------------------Hhhhhhh-ccCCCCHHHHHHHHHHHhCCCCCCCC
Confidence 11000 00000 0000000 11223568999999999999999999
Q ss_pred hHHHhc
Q 013220 406 AQQCLQ 411 (447)
Q Consensus 406 a~elL~ 411 (447)
.+++++
T Consensus 286 ~~~l~~ 291 (294)
T PHA02882 286 YDALIK 291 (294)
T ss_pred HHHHHH
Confidence 999875
No 309
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.4e-34 Score=295.29 Aligned_cols=249 Identities=20% Similarity=0.316 Sum_probs=190.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCC-----CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTR-----TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.++||+|+||+||+|.+.. ++..||+|+++.. ....+.+.+|+++++.+. .|+||+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-----~HpnIv~l~~~~ 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-----PHLNIVNLLGAC 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-----CCCCeeeEEEEE
Confidence 4678899999999999999998643 3457999988643 233467889999999994 499999999998
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc--------------------------------------------------
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR-------------------------------------------------- 136 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~-------------------------------------------------- 136 (447)
.. ....|+||||| +++|.+++....
T Consensus 111 ~~----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 111 TK----SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred cc----CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 75 36899999999 889988764321
Q ss_pred --------------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCC
Q 013220 137 --------------------------------------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172 (447)
Q Consensus 137 --------------------------------------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp 172 (447)
...+++..+..++.|++.||+|||++ +|+|+||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dikp 265 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-NCVHRDLAA 265 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCh
Confidence 12367778889999999999999996 999999999
Q ss_pred CCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcc
Q 013220 173 ENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID 252 (447)
Q Consensus 173 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (447)
+||++. ..
T Consensus 266 ~Nill~------------------------------------------------------------------------~~ 273 (400)
T cd05105 266 RNVLLA------------------------------------------------------------------------QG 273 (400)
T ss_pred HhEEEe------------------------------------------------------------------------CC
Confidence 999993 35
Q ss_pred cceeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchH
Q 013220 253 MRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDED 326 (447)
Q Consensus 253 ~~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~ 326 (447)
..++|+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||..... +..
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~-----~~~ 348 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV-----DST 348 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch-----hHH
Confidence 56999999998654321 112346678999999998889999999999999999996 8999865420 110
Q ss_pred HHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh
Q 013220 327 HLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 406 (447)
Q Consensus 327 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta 406 (447)
....+ . .. .....+...+..+.+++.+||+.||++|||+
T Consensus 349 ~~~~~-~--~~--------------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 387 (400)
T cd05105 349 FYNKI-K--SG--------------------------------------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSF 387 (400)
T ss_pred HHHHH-h--cC--------------------------------------CCCCCCccCCHHHHHHHHHHCccCHhHCcCH
Confidence 00000 0 00 0011223456789999999999999999999
Q ss_pred HHHhc
Q 013220 407 QQCLQ 411 (447)
Q Consensus 407 ~elL~ 411 (447)
.++.+
T Consensus 388 ~~l~~ 392 (400)
T cd05105 388 LHLSD 392 (400)
T ss_pred HHHHH
Confidence 88865
No 310
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-35 Score=298.98 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=208.4
Q ss_pred CCce-EEEEeecccCceEEEEEEeCCCCeEEEEEEech-----hHHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 35 GGRY-IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS-----AAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 35 ~~~y-~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
.||| +..+.||+|+|-+||+|.|..+|..||--.++. .+...+.+..|+++|+.| .|+||+++|.+|.
T Consensus 38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL------~H~NIirfy~SW~ 111 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL------KHPNIIRFYDSWV 111 (632)
T ss_pred CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC------CCCceeeeeehee
Confidence 3566 678889999999999999999999988443332 234568899999999999 8999999999999
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhh-CCcccccCCCCCeEeeecCCCCCC
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRE-LGIIHTDLKPENILLVSTIDPSKD 186 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~gIiH~Dikp~Nill~~~~~~~~~ 186 (447)
+. ....+.+|.|.+ .|+|..+..+.+ .++.+.++.|++||+.||.|||++ --|||||||=+||+|+.
T Consensus 112 d~--~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG------- 180 (632)
T KOG0584|consen 112 DT--DNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG------- 180 (632)
T ss_pred cC--CCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-------
Confidence 87 457899999999 999998887654 499999999999999999999984 36999999999999943
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc
Q 013220 187 PIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA 266 (447)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~ 266 (447)
..+.||++|+|+|...
T Consensus 181 ----------------------------------------------------------------~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 181 ----------------------------------------------------------------NLGEVKIGDLGLATLL 196 (632)
T ss_pred ----------------------------------------------------------------CcCceeecchhHHHHh
Confidence 2578999999999877
Q ss_pred cccccc-CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHh-CCCCHHhhh
Q 013220 267 NKQFAE-EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI-GKMPRKIAI 344 (447)
Q Consensus 267 ~~~~~~-~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 344 (447)
..+... .+|||.|||||++. ..|+..+||||||+.|++|+|+.|||..= ....+..-+++ |.-|..+
T Consensus 197 r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC--------~n~AQIYKKV~SGiKP~sl-- 265 (632)
T KOG0584|consen 197 RKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC--------TNPAQIYKKVTSGIKPAAL-- 265 (632)
T ss_pred hccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh--------CCHHHHHHHHHcCCCHHHh--
Confidence 665544 48999999999997 56999999999999999999999999632 22222222222 3333221
Q ss_pred CCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 345 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
.+--.+++++||.+||.. ..+|+||.|+|.||||+.....
T Consensus 266 ------------------------------------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g~ 305 (632)
T KOG0584|consen 266 ------------------------------------SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGGI 305 (632)
T ss_pred ------------------------------------hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcccccc
Confidence 111134889999999999 9999999999999999986543
No 311
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-34 Score=283.49 Aligned_cols=249 Identities=27% Similarity=0.457 Sum_probs=195.7
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
..+||+|+||.||++....++..||+|.+.... .....+.+|+.+++.+ +|+||+++++.+.. ++..++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~----~~~~~l 94 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY------QHENVVEMYNSYLV----GDELWV 94 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc------CCcchhheeeEEEe----CCEEEE
Confidence 357999999999999999999999999865432 2345688899999988 78999999998875 478999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|.+.+.. ..+++..+..++.|++.||+|||+. |++|+||+|.||++
T Consensus 95 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv--------------------- 149 (292)
T cd06657 95 VMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILL--------------------- 149 (292)
T ss_pred EEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEE---------------------
Confidence 99999 7788776643 2478999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cccCCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQ 275 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~~g 275 (447)
+.+..++|+|||.+...... .....+
T Consensus 150 ---------------------------------------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 178 (292)
T cd06657 150 ---------------------------------------------------THDGRVKLSDFGFCAQVSKEVPRRKSLVG 178 (292)
T ss_pred ---------------------------------------------------CCCCCEEEcccccceeccccccccccccc
Confidence 33567999999988644322 222467
Q ss_pred CCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcc
Q 013220 276 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 355 (447)
Q Consensus 276 t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (447)
+..|+|||.+.+..++.++|+||+||++|+|++|..||...+ ....+..+.. ..+..
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~------~~~~~~~~~~---~~~~~-------------- 235 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRD---NLPPK-------------- 235 (292)
T ss_pred CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh---hCCcc--------------
Confidence 889999999988888999999999999999999999997542 1111111110 01100
Q ss_pred cchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccC
Q 013220 356 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 420 (447)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~ 420 (447)
......++..+.+++.+||+.||.+||++.++|+||||.....
T Consensus 236 ----------------------~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 236 ----------------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred ----------------------cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 0011223557889999999999999999999999999997653
No 312
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.3e-34 Score=276.49 Aligned_cols=245 Identities=23% Similarity=0.347 Sum_probs=192.7
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++.+.|++.+.||+|+||.||++. .+++.||+|.++.... .+.+.+|+.+++.+ +|+||+++++.+...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~-~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~-- 71 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVT-AQAFLEETAVMTKL------HHKNLVRLLGVILHN-- 71 (254)
T ss_pred ccHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcch-HHHHHHHHHHHHhC------CCCCcCeEEEEEcCC--
Confidence 344689999999999999999995 4678899998865433 46788999999998 789999999987642
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
..+++|||+ +++|.+.+.......+++..+..++.|++.||+|||+. |++||||||+||++.
T Consensus 72 ---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~------------- 134 (254)
T cd05083 72 ---GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVS------------- 134 (254)
T ss_pred ---CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEc-------------
Confidence 478999999 78999988654444578889999999999999999996 999999999999993
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 271 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~ 271 (447)
....++|+|||.+........
T Consensus 135 -----------------------------------------------------------~~~~~kl~Dfg~~~~~~~~~~ 155 (254)
T cd05083 135 -----------------------------------------------------------EDGVAKVSDFGLARVGSMGVD 155 (254)
T ss_pred -----------------------------------------------------------CCCcEEECCCccceeccccCC
Confidence 356799999999875443333
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
....+..|+|||.+.+..++.++|+|||||++|+|++ |..||...+. ........ .+.
T Consensus 156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~-~~~------------- 214 (254)
T cd05083 156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-------KEVKECVE-KGY------------- 214 (254)
T ss_pred CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-------HHHHHHHh-CCC-------------
Confidence 3345678999999988889999999999999999997 9999965421 11111000 000
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+++.+||+.+|++||++++++.
T Consensus 215 --------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 --------------------------RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred --------------------------CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00112334678899999999999999999999875
No 313
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.5e-34 Score=275.67 Aligned_cols=245 Identities=24% Similarity=0.394 Sum_probs=192.8
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.++|++.++||+|+||.||+|.+. .+..+|+|.++......+.+.+|+++++.+ +|++|+++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~----- 72 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL------QHDKLVKLHAVVTK----- 72 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhc------CCCCcceEEEEEcC-----
Confidence 479999999999999999999754 456799998877665567888999999999 78899999988764
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
...+++|||+ +++|.+++.......++...+..++.|++.||.|||++ |++|+||||+||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i---------------- 135 (260)
T cd05073 73 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILV---------------- 135 (260)
T ss_pred CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEE----------------
Confidence 4689999999 78999888654444578888999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc---
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--- 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--- 270 (447)
+....++|+|||.+.......
T Consensus 136 --------------------------------------------------------~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 136 --------------------------------------------------------SASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred --------------------------------------------------------cCCCcEEECCCcceeeccCCCccc
Confidence 335679999999886543211
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....++..|+|||++....++.++|+|||||++|++++ |..||...+ .......+ .+..+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~---~~~~~--------- 221 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRAL---ERGYR--------- 221 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC------HHHHHHHH---hCCCC---------
Confidence 12234567999999988888999999999999999998 999997542 11111111 00000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
...+...+.++.+++.+||+.+|++||++.++++
T Consensus 222 -----------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 222 -----------------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -----------------------------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0112334568899999999999999999988864
No 314
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=305.97 Aligned_cols=259 Identities=27% Similarity=0.438 Sum_probs=220.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC-Cc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP-NG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~-~~ 114 (447)
+-|.+.+.||.|.+|.||++++..+++.+|||+...+....++...|.++|+.+. +|+|++.++++|....+ .+
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~-----~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS-----HHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-----CCCCcceEEEEEEEecCCCC
Confidence 6799999999999999999999999999999998888877788899999999986 89999999999887665 45
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+++||||||| ||+..++++......+.+..+..|++.++.|+.+||.+ .++|||||..|||++.
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~-------------- 158 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTE-------------- 158 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEec--------------
Confidence 7999999999 89999999876666799999999999999999999997 9999999999999943
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
++.+||+|||.+...+.. .
T Consensus 159 ----------------------------------------------------------e~~VKLvDFGvSaQldsT~grR 180 (953)
T KOG0587|consen 159 ----------------------------------------------------------NAEVKLVDFGVSAQLDSTVGRR 180 (953)
T ss_pred ----------------------------------------------------------cCcEEEeeeeeeeeeecccccc
Confidence 678999999999766644 3
Q ss_pred ccCCCCCCccChHHhhc-----CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 271 AEEIQTRQYRAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
...+||++|||||++.- .-|+..+|+||||++..+|..|.+|+.+. .-+.-++.+...+|..++
T Consensus 181 nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm---------HPmraLF~IpRNPPPkLk-- 249 (953)
T KOG0587|consen 181 NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM---------HPMRALFLIPRNPPPKLK-- 249 (953)
T ss_pred cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc---------chhhhhccCCCCCCcccc--
Confidence 44589999999999963 23678999999999999999999999643 334444444444443221
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
-+..=++.|.+||..||..|-++||+..++|.|||+++
T Consensus 250 ----------------------------------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 250 ----------------------------------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred ----------------------------------chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 12334779999999999999999999999999999993
No 315
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-34 Score=283.50 Aligned_cols=248 Identities=22% Similarity=0.349 Sum_probs=191.1
Q ss_pred CceEEEEeecccCceEEEEEEeCC-------CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTR-------TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
++|.+.++||+|+||.||+|++.. +...+|+|.++.. ......+.+|+++++.+. .|+||++++++
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~ 92 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGA 92 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-----CCCCEeeEEEE
Confidence 789999999999999999997643 2357999988753 233456888999999885 68999999998
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY--------------KGLELNKVREICKYILTGLDYLHRELGIIHTDLK 171 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dik 171 (447)
+... ...|+||||+ +++|.+++..... ..++...++.++.|++.||+|||+. |++|||||
T Consensus 93 ~~~~----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlk 167 (307)
T cd05098 93 CTQD----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLA 167 (307)
T ss_pred EecC----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-Cccccccc
Confidence 8753 6799999999 7899998865321 2377888999999999999999996 99999999
Q ss_pred CCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCc
Q 013220 172 PENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI 251 (447)
Q Consensus 172 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (447)
|+||++. .
T Consensus 168 p~Nill~------------------------------------------------------------------------~ 175 (307)
T cd05098 168 ARNVLVT------------------------------------------------------------------------E 175 (307)
T ss_pred HHheEEc------------------------------------------------------------------------C
Confidence 9999993 3
Q ss_pred ccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCch
Q 013220 252 DMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDE 325 (447)
Q Consensus 252 ~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~ 325 (447)
+..++|+|||.+....... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+ .
T Consensus 176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-------~ 248 (307)
T cd05098 176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-------V 248 (307)
T ss_pred CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-------H
Confidence 5679999999986543211 11123468999999988889999999999999999998 888885432 1
Q ss_pred HHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC
Q 013220 326 DHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT 405 (447)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt 405 (447)
..+..... .. .....+...+.++.+||.+||+.+|++|||
T Consensus 249 ~~~~~~~~---~~-------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 288 (307)
T cd05098 249 EELFKLLK---EG-------------------------------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPT 288 (307)
T ss_pred HHHHHHHH---cC-------------------------------------CCCCCCCcCCHHHHHHHHHHcccChhhCcC
Confidence 11111110 00 001123344668899999999999999999
Q ss_pred hHHHhcC
Q 013220 406 AQQCLQH 412 (447)
Q Consensus 406 a~elL~h 412 (447)
+.+++++
T Consensus 289 ~~evl~~ 295 (307)
T cd05098 289 FKQLVED 295 (307)
T ss_pred HHHHHHH
Confidence 9999865
No 316
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=297.22 Aligned_cols=245 Identities=25% Similarity=0.415 Sum_probs=192.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+...+.++||+|+||+||+|++- ..||||++..+ ....+.|.+|+.+++.. .|.||+=+++++...
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT------RH~NIlLFMG~~~~p-- 460 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKT------RHENILLFMGACMNP-- 460 (678)
T ss_pred HHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhc------chhhheeeehhhcCC--
Confidence 34678899999999999999874 46999988754 34578999999999999 788999999999864
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.+.||..+| |.+|+.++.-.+ ..|++.+++.|++|++.|+.|||.+ +|||||+|..||++
T Consensus 461 ---~~AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl-------------- 521 (678)
T KOG0193|consen 461 ---PLAIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFL-------------- 521 (678)
T ss_pred ---ceeeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEE--------------
Confidence 459999999 778888774332 4589999999999999999999998 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc----
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---- 267 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---- 267 (447)
..+..|||+|||++....
T Consensus 522 ----------------------------------------------------------~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 522 ----------------------------------------------------------HEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred ----------------------------------------------------------ccCCcEEEecccceeeeeeecc
Confidence 446889999999985322
Q ss_pred -cccccCCCCCCccChHHhhc---CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 268 -KQFAEEIQTRQYRAPEVILR---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 268 -~~~~~~~gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
+......|..-|+|||++.. .+|++.+|+||||||+|||++|.+||....... .+ +. .|..
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq------Ii---fm-VGrG----- 608 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ------II---FM-VGRG----- 608 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh------eE---EE-eccc-----
Confidence 23333456788999999974 479999999999999999999999997432111 00 00 0000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.- ..+ ......+.+.++.+|+..||.+++++||++.+||.
T Consensus 609 ---~l---------------------~pd----~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 609 ---YL---------------------MPD----LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ---cc---------------------Ccc----chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 00 000 00123455779999999999999999999999986
No 317
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-34 Score=281.86 Aligned_cols=247 Identities=21% Similarity=0.372 Sum_probs=192.5
Q ss_pred CCceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
.++|.+.+.||.|+||.||+|.+. .++..+++|.++... ...+.+.+|+++++.+ .|+||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~ 77 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL------QHEHIVKFYGVCG 77 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC------CCCCcceEEEEEc
Confidence 467999999999999999999753 345678999876543 3345788999999998 7899999999887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRY--------------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
. ....++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+
T Consensus 78 ~----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~ 152 (291)
T cd05094 78 D----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATR 152 (291)
T ss_pred c----CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcc
Confidence 4 46799999999 8899998864321 2378889999999999999999997 9999999999
Q ss_pred CeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc
Q 013220 174 NILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM 253 (447)
Q Consensus 174 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (447)
||++ +.+.
T Consensus 153 Nil~------------------------------------------------------------------------~~~~ 160 (291)
T cd05094 153 NCLV------------------------------------------------------------------------GANL 160 (291)
T ss_pred eEEE------------------------------------------------------------------------ccCC
Confidence 9999 3456
Q ss_pred ceeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHH
Q 013220 254 RCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDH 327 (447)
Q Consensus 254 ~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~ 327 (447)
.++|+|||.+...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+ ....
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~ 234 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS------NTEV 234 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHH
Confidence 7999999998654322 122346788999999998889999999999999999998 999986542 1111
Q ss_pred HHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChH
Q 013220 328 LALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 328 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
+..+.. +..+ ..+...+..+.+++.+||+.||++|||+.
T Consensus 235 ~~~~~~--~~~~---------------------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 273 (291)
T cd05094 235 IECITQ--GRVL---------------------------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIK 273 (291)
T ss_pred HHHHhC--CCCC---------------------------------------CCCccCCHHHHHHHHHHcccChhhCcCHH
Confidence 111000 0000 01122356788999999999999999999
Q ss_pred HHhc
Q 013220 408 QCLQ 411 (447)
Q Consensus 408 elL~ 411 (447)
++++
T Consensus 274 ~v~~ 277 (291)
T cd05094 274 EIYK 277 (291)
T ss_pred HHHH
Confidence 9974
No 318
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.6e-34 Score=275.35 Aligned_cols=246 Identities=20% Similarity=0.331 Sum_probs=192.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCC---CeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRT---SSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
++|++.+.||+|+||+||+|.+..+ ...||+|.++.. ......+.+|+.+++.+ +|+||+++++.+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~- 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF------DHPNIIRLEGVVTK- 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC------CCCCcceEeEEEec-
Confidence 5799999999999999999987644 468999987643 23345788899999999 78999999998864
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+...+++|||+ +++|.+.+.... ..++...+..++.|++.||+|||+. +|+|+||||+||++
T Consensus 77 ---~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili------------ 139 (266)
T cd05033 77 ---SRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILV------------ 139 (266)
T ss_pred ---CCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEE------------
Confidence 36799999999 889988876533 3588999999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+....++|+|||.+......
T Consensus 140 ------------------------------------------------------------~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 140 ------------------------------------------------------------NSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred ------------------------------------------------------------cCCCCEEECccchhhccccc
Confidence 33567999999999765421
Q ss_pred cc-----cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 FA-----EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 ~~-----~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.. ...++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+ .......+.+ ..
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~---~~----- 225 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS------NQDVIKAVED---GY----- 225 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC------HHHHHHHHHc---CC-----
Confidence 11 1133568999999998889999999999999999997 999986442 1111111100 00
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+..+.+|+.+||+.+|++||++++++++
T Consensus 226 ---------------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 226 ---------------------------------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ---------------------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 001122346688999999999999999999999864
No 319
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.5e-34 Score=276.63 Aligned_cols=249 Identities=23% Similarity=0.287 Sum_probs=189.8
Q ss_pred eEEEEeecccCceEEEEEEeCC---CCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTR---TSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
|++.+.||+|+||.||+|.... ++..||+|.++... .....+.+|+++++.+ +|+||+++++.+....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF------DHPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC------CCCCeeeEEeeeccCC
Confidence 5788999999999999998654 34789999877542 2345788899999998 7899999998776432
Q ss_pred C--CcceEEEEEecc-cccHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 112 P--NGQHLCMVLEFL-GDSLLRLIKYSR----YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 112 ~--~~~~~~lvmE~~-~~~L~~~~~~~~----~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
. .....+++|||+ +++|...+.... ...+++..+..++.|++.||+|||++ +++||||||+||++
T Consensus 75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~------- 146 (273)
T cd05035 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCML------- 146 (273)
T ss_pred ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEE-------
Confidence 1 123589999999 888887774432 13478899999999999999999996 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+....++|+|||.+.
T Consensus 147 -----------------------------------------------------------------~~~~~~kl~dfg~~~ 161 (273)
T cd05035 147 -----------------------------------------------------------------REDMTVCVADFGLSK 161 (273)
T ss_pred -----------------------------------------------------------------CCCCeEEECCcccee
Confidence 335679999999987
Q ss_pred ccccccc-----cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 265 RANKQFA-----EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 265 ~~~~~~~-----~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
....... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.. ..... ..+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~------~~~~~---~~~~~~~ 232 (273)
T cd05035 162 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE------NHEIY---DYLRHGN 232 (273)
T ss_pred eccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC------HHHHH---HHHHcCC
Confidence 5433221 1234568999999988889999999999999999998 888886542 11111 1110000
Q ss_pred CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
....+...+..+.+++.+||+.||.+|||+.+++++
T Consensus 233 --------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 --------------------------------------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred --------------------------------------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011233456689999999999999999999999864
No 320
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.2e-34 Score=278.31 Aligned_cols=248 Identities=22% Similarity=0.320 Sum_probs=187.9
Q ss_pred cccCCceEEEEeecccCceEEEEEEeCCCCe----EEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSS----YVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 32 ~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
++..++|++.+.||.|+||+||+|.+..++. .+++|.+.... .....+..|+.+++.+ .|+||+++++
T Consensus 3 ~~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l------~h~~iv~~~~ 76 (279)
T cd05111 3 ILKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL------DHAYIVRLLG 76 (279)
T ss_pred cCCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC------CCCCcceEEE
Confidence 4555789999999999999999999876665 46777664322 2234566677777766 8899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
++.. ...+++|||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ |++|+||||+||++
T Consensus 77 ~~~~-----~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili------- 142 (279)
T cd05111 77 ICPG-----ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILL------- 142 (279)
T ss_pred EECC-----CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEE-------
Confidence 8642 4578899999 889999886433 4588999999999999999999996 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+....++|+|||.+.
T Consensus 143 -----------------------------------------------------------------~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 143 -----------------------------------------------------------------KSDSIVQIADFGVAD 157 (279)
T ss_pred -----------------------------------------------------------------cCCCcEEEcCCccce
Confidence 335679999999986
Q ss_pred ccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 265 RANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 265 ~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
..... .....++..|+|||.+.+..++.++|||||||++|++++ |..||.+.. ...+..+.+. +..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-------~~~~~~~~~~-~~~ 229 (279)
T cd05111 158 LLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR-------PHEVPDLLEK-GER 229 (279)
T ss_pred eccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHHC-CCc
Confidence 54221 112245678999999988889999999999999999998 999996542 1111111110 000
Q ss_pred CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
...+...+..+.+++.+||..||++|||+.|+++
T Consensus 230 ---------------------------------------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 230 ---------------------------------------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ---------------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0011122446788999999999999999999876
No 321
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=295.60 Aligned_cols=234 Identities=26% Similarity=0.376 Sum_probs=193.1
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMV 120 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lv 120 (447)
++.||+|+.|.||+|+. .++.||||..+. .-..+|+=|+.| .|+||+++.+++..+ ..+|||
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~e------lkETdIKHLRkL------kH~NII~FkGVCtqs----PcyCIi 190 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRE------LKETDIKHLRKL------KHPNIITFKGVCTQS----PCYCII 190 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhh------hhhhhHHHHHhc------cCcceeeEeeeecCC----ceeEEe
Confidence 56799999999999965 578999994332 223467778888 899999999999865 799999
Q ss_pred Eecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCC
Q 013220 121 LEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERP 199 (447)
Q Consensus 121 mE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~ 199 (447)
|||| .|-|+.+++.++ .+.......|..+|+.|+.|||.+ .|||||||.-||||+.
T Consensus 191 MEfCa~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~-------------------- 247 (904)
T KOG4721|consen 191 MEFCAQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISY-------------------- 247 (904)
T ss_pred eeccccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeec--------------------
Confidence 9999 888999998764 488999999999999999999997 9999999999999955
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc--cCCCCC
Q 013220 200 EGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTR 277 (447)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~gt~ 277 (447)
+..+|++|||.++.....-+ .++||.
T Consensus 248 ----------------------------------------------------~d~VKIsDFGTS~e~~~~STkMSFaGTV 275 (904)
T KOG4721|consen 248 ----------------------------------------------------DDVVKISDFGTSKELSDKSTKMSFAGTV 275 (904)
T ss_pred ----------------------------------------------------cceEEeccccchHhhhhhhhhhhhhhhH
Confidence 45699999999976554333 468999
Q ss_pred CccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccc
Q 013220 278 QYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 357 (447)
Q Consensus 278 ~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.|||||+|...+.+.|+||||||||||+|+||..||.+-+..++ |. |-...
T Consensus 276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------Iw---GVGsN----------------- 326 (904)
T KOG4721|consen 276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------IW---GVGSN----------------- 326 (904)
T ss_pred hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---------EE---eccCC-----------------
Confidence 99999999999999999999999999999999999976642221 11 00000
Q ss_pred hhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 358 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
.-....|...++.|.-||+.||.-.|..||++.|+|.|-
T Consensus 327 -----------------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 327 -----------------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred -----------------cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 001247788899999999999999999999999999984
No 322
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3e-34 Score=280.03 Aligned_cols=254 Identities=21% Similarity=0.311 Sum_probs=192.7
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCC----------------eEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTS----------------SYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSN 96 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~----------------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~ 96 (447)
.++|++.++||+|+||.||+|++...+ ..||+|.+.... .....+.+|+++++.+ .
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l------~ 77 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL------S 77 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc------C
Confidence 368999999999999999999876533 568999876543 3456788999999999 7
Q ss_pred cceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q 013220 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSR---------YKGLELNKVREICKYILTGLDYLHRELGII 166 (447)
Q Consensus 97 ~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~---------~~~l~~~~~~~i~~qil~aL~~lH~~~gIi 166 (447)
|+||+++++++... ...+++|||+ +++|.+++.... ...+++..+..++.|++.||+|||++ ||+
T Consensus 78 ~~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i~ 152 (296)
T cd05051 78 DPNIARLLGVCTVD----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NFV 152 (296)
T ss_pred CCCEeEEEEEEecC----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Ccc
Confidence 89999999988753 6899999999 788988876533 12478999999999999999999996 999
Q ss_pred cccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCc
Q 013220 167 HTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPER 246 (447)
Q Consensus 167 H~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (447)
|+||||+||++.
T Consensus 153 H~dlkp~Nili~-------------------------------------------------------------------- 164 (296)
T cd05051 153 HRDLATRNCLVG-------------------------------------------------------------------- 164 (296)
T ss_pred ccccchhceeec--------------------------------------------------------------------
Confidence 999999999993
Q ss_pred cCCCcccceeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh--CCCCCCCCCCC
Q 013220 247 CLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQ 319 (447)
Q Consensus 247 ~~~~~~~~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~--g~~Pf~~~~~~ 319 (447)
....++|+|||.+...... .....++..|+|||.+.+..++.++|||||||++|+|++ +..||...+
T Consensus 165 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 165 ----KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred ----CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 3567999999998653322 112245678999999988889999999999999999987 677775432
Q ss_pred CCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccC
Q 013220 320 GFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFT 399 (447)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d 399 (447)
....+............ ......+...+.++.+++.+||+.|
T Consensus 239 ----~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~l~~li~~cl~~~ 280 (296)
T cd05051 239 ----DQQVIENAGHFFRDDGR----------------------------------QIYLPRPPNCPKDIYELMLECWRRD 280 (296)
T ss_pred ----hHHHHHHHHhccccccc----------------------------------cccCCCccCCCHHHHHHHHHHhccC
Confidence 12222221111000000 0000112234568999999999999
Q ss_pred CCCCCChHHHhc
Q 013220 400 PEKRPTAQQCLQ 411 (447)
Q Consensus 400 P~kRpta~elL~ 411 (447)
|++|||+.++++
T Consensus 281 p~~Rpt~~el~~ 292 (296)
T cd05051 281 EEDRPTFREIHL 292 (296)
T ss_pred hhcCCCHHHHHH
Confidence 999999999964
No 323
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.5e-34 Score=276.75 Aligned_cols=262 Identities=23% Similarity=0.309 Sum_probs=193.5
Q ss_pred CCceEEEEeecccCceEEEEEE----eCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAY----DTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~----~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
..+|++.+.||+|+||+||+|. +..++..||+|.++.. ....+.+.+|+++++.+ .|+||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~ 76 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL------QHDNIVKYKGVCYS 76 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC------CCCCeeEEEEEEcc
Confidence 3579999999999999999997 4457889999987644 33356788999999999 78999999997654
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. +...+++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 77 ~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili----------- 141 (284)
T cd05081 77 A--GRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILV----------- 141 (284)
T ss_pred C--CCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEE-----------
Confidence 3 345799999999 889998886432 3478899999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||++.....
T Consensus 142 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 142 -------------------------------------------------------------ESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred -------------------------------------------------------------CCCCeEEECCCcccccccC
Confidence 3356799999999875433
Q ss_pred ccc------cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 269 QFA------EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 269 ~~~------~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
... ...++..|+|||.+.+..++.++|||||||++|+|++|..|+..... ...+..+......
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 229 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-----------EFMRMMGNDKQGQ 229 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-----------hhhhhcccccccc
Confidence 211 11234569999999888899999999999999999998877643320 0011111100000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhh--hcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVD--KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.. ...+...+.. ....+...+..+.+||.+||..+|++|||+.++++
T Consensus 230 --------~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 230 --------MI--------------VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred --------cc--------------hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00 0000001111 11123345678999999999999999999999976
No 324
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.2e-34 Score=274.48 Aligned_cols=236 Identities=20% Similarity=0.342 Sum_probs=184.1
Q ss_pred eecccCceEEEEEEe--CCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 43 KLGWGQFSIVWLAYD--TRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~--~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+||+|+||.||+|.+ ..++..+|+|+++.. ....+.+.+|+.+++.+ .|+||+++++.+.. +..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~-----~~~ 70 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL------DNPYIVRMIGICEA-----ESW 70 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC------CCCCcceEEEEEcC-----CCc
Confidence 689999999999964 456889999987643 23456788899999998 78999999987642 467
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
++||||+ +++|.+++... ..+++..+..++.|++.||+|||++ ||+||||||.||++
T Consensus 71 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill------------------- 128 (257)
T cd05116 71 MLVMELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLL------------------- 128 (257)
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEE-------------------
Confidence 8999999 78898888643 3488999999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc------
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF------ 270 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~------ 270 (447)
+....++|+|||.+.......
T Consensus 129 -----------------------------------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 129 -----------------------------------------------------VTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred -----------------------------------------------------cCCCeEEECCCccccccCCCCCeeeec
Confidence 335679999999986544321
Q ss_pred ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 271 AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
....++..|+|||.+....++.++|+|||||++|+|++ |..||.... .......+.+ +
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~i~~--~------------- 214 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK------GNEVTQMIES--G------------- 214 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHC--C-------------
Confidence 11233578999999988888999999999999999997 999996542 1111111100 0
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
..+..+...+..+.+||.+||+.||++||+++++..
T Consensus 215 --------------------------~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 215 --------------------------ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --------------------------CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 011233345678999999999999999999998864
No 325
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=287.07 Aligned_cols=271 Identities=24% Similarity=0.342 Sum_probs=222.6
Q ss_pred CccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcc
Q 013220 23 GYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEK 98 (447)
Q Consensus 23 ~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~ 98 (447)
.+|+..--+++....|.++..||+|+||.|-+|..+.+.+.||||+++++.. ..+-...|-++|.... .-|
T Consensus 336 ~~~~~~~~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~-----kpp 410 (683)
T KOG0696|consen 336 KFHNSSKRDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-----KPP 410 (683)
T ss_pred cCCCCCcccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCC-----CCc
Confidence 3444444455556789999999999999999999999999999999987752 3445566777877765 456
Q ss_pred eeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 99 CVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 99 ~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
.++.+..+|.. -+.+|+||||+ ||+|-..+..- ..+-+..+..++..|+.||-|||++ |||.||+|.+|+|+
T Consensus 411 FL~qlHScFQT----mDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmL 483 (683)
T KOG0696|consen 411 FLVQLHSCFQT----MDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVML 483 (683)
T ss_pred hHHHHHHHhhh----hhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEe
Confidence 88888888884 48999999999 99988877643 4488889999999999999999997 99999999999999
Q ss_pred eecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeE
Q 013220 178 VSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKV 257 (447)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL 257 (447)
+.++.+||
T Consensus 484 ------------------------------------------------------------------------d~eGHiKi 491 (683)
T KOG0696|consen 484 ------------------------------------------------------------------------DSEGHIKI 491 (683)
T ss_pred ------------------------------------------------------------------------ccCCceEe
Confidence 66899999
Q ss_pred eecCccccc---ccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHH
Q 013220 258 VDFGNACRA---NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMEL 334 (447)
Q Consensus 258 ~Dfg~a~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 334 (447)
+|||.++.- ......+|||+-|+|||++...+|+..+|.||+||+||+|+.|+.||.+.+.. ..
T Consensus 492 ~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~------el------- 558 (683)
T KOG0696|consen 492 ADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------EL------- 558 (683)
T ss_pred eecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH------HH-------
Confidence 999999732 22334579999999999999999999999999999999999999999887521 11
Q ss_pred hCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCCh-----HHH
Q 013220 335 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQC 409 (447)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta-----~el 409 (447)
+..+...+..+|...+.++.+++...|...|.+|.-. .++
T Consensus 559 -----------------------------------F~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di 603 (683)
T KOG0696|consen 559 -----------------------------------FQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDI 603 (683)
T ss_pred -----------------------------------HHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccch
Confidence 3445555667888899999999999999999999754 688
Q ss_pred hcCcccccccCCcccc
Q 013220 410 LQHPWLSLRNSTRDET 425 (447)
Q Consensus 410 L~hp~f~~~~~~~~~~ 425 (447)
-.||||+.+.=...+.
T Consensus 604 ~~H~FFR~iDWek~E~ 619 (683)
T KOG0696|consen 604 REHPFFRRIDWEKLER 619 (683)
T ss_pred hhCcchhhccHHHHhh
Confidence 8999999775444433
No 326
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.1e-34 Score=281.71 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=189.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCC--------------CeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcce
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRT--------------SSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKC 99 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~--------------~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~ 99 (447)
++|++.++||+|+||.||+|++..+ ...||+|.+... ......+.+|+++++.+ .|+|
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l------~h~~ 78 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL------KNPN 78 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC------CCCC
Confidence 6899999999999999999976432 345899987653 23345788999999999 7899
Q ss_pred eeeecccccccCCCcceEEEEEecc-cccHHHHHHhhc----------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q 013220 100 VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSR----------YKGLELNKVREICKYILTGLDYLHRELGIIHT 168 (447)
Q Consensus 100 Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~----------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~ 168 (447)
|+++++++.. ....++||||+ +++|.+++.... ...++...+..++.|++.||+|||++ |++|+
T Consensus 79 i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~ 153 (295)
T cd05097 79 IIRLLGVCVS----DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFVHR 153 (295)
T ss_pred cCeEEEEEcC----CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-Ceecc
Confidence 9999999874 36899999999 889988875421 11367788899999999999999996 99999
Q ss_pred cCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccC
Q 013220 169 DLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCL 248 (447)
Q Consensus 169 Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (447)
||||+||+++
T Consensus 154 dlkp~Nill~---------------------------------------------------------------------- 163 (295)
T cd05097 154 DLATRNCLVG---------------------------------------------------------------------- 163 (295)
T ss_pred ccChhhEEEc----------------------------------------------------------------------
Confidence 9999999993
Q ss_pred CCcccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh--CCCCCCCCCCCCC
Q 013220 249 DGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQGF 321 (447)
Q Consensus 249 ~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~--g~~Pf~~~~~~~~ 321 (447)
....++|+|||++....... ....++..|+|||.+.+..++.++|+|||||++|+|++ +..||...+
T Consensus 164 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~---- 237 (295)
T cd05097 164 --NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS---- 237 (295)
T ss_pred --CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC----
Confidence 34569999999986432211 12234678999999988889999999999999999988 667776542
Q ss_pred CCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCC
Q 013220 322 CEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE 401 (447)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~ 401 (447)
....+....+........ .....+...+..+.+|+.+||+.||+
T Consensus 238 --~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~l~~li~~~l~~~p~ 281 (295)
T cd05097 238 --DEQVIENTGEFFRNQGRQ----------------------------------IYLSQTPLCPSPVFKLMMRCWSRDIK 281 (295)
T ss_pred --hHHHHHHHHHhhhhcccc----------------------------------ccCCCCCCCCHHHHHHHHHHcCCCch
Confidence 122222211110000000 00011223466899999999999999
Q ss_pred CCCChHHHhc
Q 013220 402 KRPTAQQCLQ 411 (447)
Q Consensus 402 kRpta~elL~ 411 (447)
+|||++++++
T Consensus 282 ~RPs~~~i~~ 291 (295)
T cd05097 282 DRPTFNKIHH 291 (295)
T ss_pred hCcCHHHHHH
Confidence 9999999964
No 327
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=317.86 Aligned_cols=265 Identities=23% Similarity=0.353 Sum_probs=209.2
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHh----HHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF----AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
++...|.+++.||.|+||.|.+.+++.+++.||.|++.+.... ...|..|-.+|..- +.+=|+.+.=+|.
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~------ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG------NSEWIVQLHYAFQ 145 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC------CcHHHHHHHHHhc
Confidence 3457899999999999999999999999999999988774322 34677777787666 4455777777777
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
+ ..++|+||||| ||+|..++.... .++++.++.+...|+.||.-+|+ +|+|||||||+|||+
T Consensus 146 D----~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~-mgyVHRDiKPDNvLl---------- 208 (1317)
T KOG0612|consen 146 D----ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHS-MGYVHRDIKPDNVLL---------- 208 (1317)
T ss_pred C----ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHh-ccceeccCCcceeEe----------
Confidence 5 47999999999 999999987543 69999999999999999999999 799999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
+..+++||+|||.|..+.
T Consensus 209 --------------------------------------------------------------d~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 209 --------------------------------------------------------------DKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred --------------------------------------------------------------cccCcEeeccchhHHhcC
Confidence 678999999999997765
Q ss_pred cc----cccCCCCCCccChHHhh----c-CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 268 KQ----FAEEIQTRQYRAPEVIL----R-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 268 ~~----~~~~~gt~~y~aPE~l~----~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
.. ...-+|||-|.|||++. + +.|+..+|.||+||++|+|+.|..||+..+-.+ ....|+..
T Consensus 227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslve------TY~KIm~h---- 296 (1317)
T KOG0612|consen 227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVE------TYGKIMNH---- 296 (1317)
T ss_pred CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHH------HHHHHhch----
Confidence 22 12348999999999996 3 568999999999999999999999997653111 11111110
Q ss_pred CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCC--hhhHHHHHHHHhhccccCCCCCCC---hHHHhcCc
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS--ETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHP 413 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ll~~~L~~dP~kRpt---a~elL~hp 413 (447)
.+...|| -.+++++.+||.+++ -+|+.|.. ++++-+||
T Consensus 297 ------------------------------------k~~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 297 ------------------------------------KESLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred ------------------------------------hhhcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCc
Confidence 0112233 347889999999988 46999998 99999999
Q ss_pred ccccccCCcccccccC
Q 013220 414 WLSLRNSTRDETKNKS 429 (447)
Q Consensus 414 ~f~~~~~~~~~~~~~~ 429 (447)
||....=.+......+
T Consensus 340 FF~g~~W~~iR~~~pP 355 (1317)
T KOG0612|consen 340 FFEGIDWDNIRESVPP 355 (1317)
T ss_pred cccCCChhhhhhcCCC
Confidence 9997644333333333
No 328
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.8e-34 Score=309.70 Aligned_cols=131 Identities=25% Similarity=0.465 Sum_probs=114.5
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|++.++||+|+||+||+|++..+++.||||+++... .....+..|+.+++.+ .|++|++++..+..
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l------~hp~Iv~~~~~~~~-- 75 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS------KSPFIVHLYYSLQS-- 75 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc------CCCCcCeEEEEEEE--
Confidence 57999999999999999999999999999999887542 2345678899999888 78999999988764
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeee
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
..++|+||||+ +++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+|||+..
T Consensus 76 --~~~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~ 139 (669)
T cd05610 76 --ANNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISN 139 (669)
T ss_pred --CCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcC
Confidence 46899999999 88999888643 3488999999999999999999996 9999999999999954
No 329
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=281.50 Aligned_cols=247 Identities=18% Similarity=0.292 Sum_probs=190.1
Q ss_pred CceEEEEeecccCceEEEEEEeCC-----CCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTR-----TSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
.+|.+.++||.|+||.||+|++.. .+..||+|+++... ...+.+.+|++++..+ .|+||+++++.+.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~ 78 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL------QHPNIVCLLGVVT 78 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEc
Confidence 568889999999999999998754 35789999887543 2345678899999888 7899999999887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSR--------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
.. ...++++||+ +++|..++.... ...+++..+..++.|++.||+|||++ ||+||||||+
T Consensus 79 ~~----~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp~ 153 (283)
T cd05091 79 KE----QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLATR 153 (283)
T ss_pred CC----CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-Cccccccchh
Confidence 54 5789999999 778888774211 12377888899999999999999996 9999999999
Q ss_pred CeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc
Q 013220 174 NILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM 253 (447)
Q Consensus 174 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (447)
||++. ...
T Consensus 154 Nil~~------------------------------------------------------------------------~~~ 161 (283)
T cd05091 154 NVLVF------------------------------------------------------------------------DKL 161 (283)
T ss_pred heEec------------------------------------------------------------------------CCC
Confidence 99993 345
Q ss_pred ceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHH
Q 013220 254 RCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDH 327 (447)
Q Consensus 254 ~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~ 327 (447)
.++|+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.. ....
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~ 235 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDV 235 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC------HHHH
Confidence 69999999986543211 12245678999999988889999999999999999998 888886542 1111
Q ss_pred HHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChH
Q 013220 328 LALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 328 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
...+.+ .+ ....+...+..+.+|+.+||+.+|++||+++
T Consensus 236 ~~~i~~----~~-------------------------------------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~ 274 (283)
T cd05091 236 IEMIRN----RQ-------------------------------------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFK 274 (283)
T ss_pred HHHHHc----CC-------------------------------------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence 111110 00 0012334567889999999999999999999
Q ss_pred HHhcC
Q 013220 408 QCLQH 412 (447)
Q Consensus 408 elL~h 412 (447)
++++.
T Consensus 275 ~i~~~ 279 (283)
T cd05091 275 DIHSR 279 (283)
T ss_pred HHHHH
Confidence 99864
No 330
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3e-34 Score=273.33 Aligned_cols=244 Identities=25% Similarity=0.387 Sum_probs=192.6
Q ss_pred eEEEEeecccCceEEEEEEeCCCC----eEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTS----SYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+++.+.||.|+||.||+|++...+ ..||+|+++.... ....+.+|+++++.+ +|++|+++++.+...
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~- 73 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL------DHPNIVKLLGVCTEE- 73 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc------CCCchheEEEEEcCC-
Confidence 357789999999999999988766 8999998875543 456888999999998 788999999988754
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+++|||+ +++|.+.+.......+++..+..++.|++.||++||+. |++|+||||+||++
T Consensus 74 ---~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~------------- 136 (258)
T smart00219 74 ---EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLV------------- 136 (258)
T ss_pred ---CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEE-------------
Confidence 6899999999 88999888654433389999999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+....++|+|||.+.......
T Consensus 137 -----------------------------------------------------------~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 137 -----------------------------------------------------------GENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred -----------------------------------------------------------ccCCeEEEcccCCceeccccc
Confidence 335579999999986544321
Q ss_pred c----cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 271 A----EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 271 ~----~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
. ...++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+ .......+.. ..
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~~~----~~------ 221 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS------NEEVLEYLKK----GY------ 221 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhc----CC------
Confidence 1 1225788999999987788999999999999999998 788886432 1111111110 00
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+.++.+++.+||..||++|||+.|+++
T Consensus 222 -------------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 222 -------------------------------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -------------------------------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 01122335678999999999999999999999986
No 331
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.2e-34 Score=273.52 Aligned_cols=237 Identities=24% Similarity=0.381 Sum_probs=184.8
Q ss_pred EeecccCceEEEEEEeCCCC---eEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTRTS---SYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~---~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
++||+|+||.||+|....++ ..||+|.+..... ..+.+.+|+++++.+ .|+||+++++++.. ..
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~-----~~ 69 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL------DHPCIVRLIGVCKG-----EP 69 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc------CCCCeeeEEEEEcC-----Cc
Confidence 47999999999999766554 7899998775543 456788899999998 78999999987642 46
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.++||||+ +++|.+++.... .+++..+..++.|++.||+|||.. +++|+||||+||++
T Consensus 70 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili------------------ 128 (257)
T cd05060 70 LMLVMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLL------------------ 128 (257)
T ss_pred eEEEEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEE------------------
Confidence 89999999 789998886543 588999999999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccC--
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE-- 273 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-- 273 (447)
+....++|+|||.+..........
T Consensus 129 ------------------------------------------------------~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 129 ------------------------------------------------------VNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred ------------------------------------------------------cCCCcEEeccccccceeecCCccccc
Confidence 335679999999987543222111
Q ss_pred ----CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 274 ----IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 274 ----~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.++..|+|||.+.+..++.++|||||||++|++++ |..||...+ .......+.+ ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~------~~~~~~~~~~---~~---------- 215 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK------GAEVIAMLES---GE---------- 215 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHc---CC----------
Confidence 12457999999988889999999999999999997 999996542 1111111100 00
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.++|.+||..+|++|||+.++++
T Consensus 216 ----------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 216 ----------------------------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ----------------------------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00122334568899999999999999999999874
No 332
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.6e-34 Score=277.73 Aligned_cols=243 Identities=26% Similarity=0.406 Sum_probs=186.7
Q ss_pred EEEEeecccCceEEEEEEeC----CCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 39 IAQRKLGWGQFSIVWLAYDT----RTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 39 ~l~~~lG~G~~g~Vy~a~~~----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.+.+.||.|.||.||+|... ..+..|+||+++.. ....+.+.+|++.++.+ +|+||+++++++...
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l------~h~ni~~~~g~~~~~-- 73 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL------RHPNIVKLYGFCIEN-- 73 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH------SBTTBE-EEEEEESS--
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc------ccccccccccccccc--
Confidence 57889999999999999776 45788999998653 33467889999999999 899999999999843
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
...++||||+ +++|.+.+.......++...+..++.|++.||+|||++ +++|++|+++||++
T Consensus 74 --~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill-------------- 136 (259)
T PF07714_consen 74 --EPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILL-------------- 136 (259)
T ss_dssp --SSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEE--------------
T ss_pred --ccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccc--------------
Confidence 4599999999 78999998876445689999999999999999999997 99999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-- 269 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-- 269 (447)
+....+||+|||++......
T Consensus 137 ----------------------------------------------------------~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 137 ----------------------------------------------------------DSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp ----------------------------------------------------------ETTTEEEEESTTTGEETTTSSS
T ss_pred ----------------------------------------------------------cccccccccccccccccccccc
Confidence 44678999999999765211
Q ss_pred ---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 270 ---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 270 ---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
......+..|+|||.+.+..++.++||||||+++|++++ |..||...+ .......+.+
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~------~~~~~~~~~~------------ 220 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD------NEEIIEKLKQ------------ 220 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC------HHHHHHHHHT------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccc------------
Confidence 122345678999999999889999999999999999999 778886542 1111111100
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
......+...+..+.++|..||..||++|||+.++++
T Consensus 221 -----------------------------~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 221 -----------------------------GQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp -----------------------------TEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred -----------------------------cccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0011133345678889999999999999999999975
No 333
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5e-34 Score=272.45 Aligned_cols=245 Identities=22% Similarity=0.367 Sum_probs=190.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
.+|++.+.||.|+||.||+|.+. .+..+|+|.++........+.+|+++++.+ .|++|+++++++... .
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~----~ 72 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKL------SHPKLVQLYGVCTER----S 72 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhC------CCCCeeeEEEEEccC----C
Confidence 57999999999999999999875 467899998876554456788999999998 788999999987743 5
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..++||||+ +++|.+.+.... ..+++..+..++.|++.||++||+. +++|+||||+||++.
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~---------------- 134 (256)
T cd05112 73 PICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVG---------------- 134 (256)
T ss_pred ceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEc----------------
Confidence 789999999 788887775432 3478899999999999999999996 999999999999993
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc---
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA--- 271 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~--- 271 (447)
....++|+|||.+........
T Consensus 135 --------------------------------------------------------~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 135 --------------------------------------------------------ENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred --------------------------------------------------------CCCeEEECCCcceeecccCccccc
Confidence 345799999998864432211
Q ss_pred -cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCc
Q 013220 272 -EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 349 (447)
Q Consensus 272 -~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 349 (447)
...++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... .......+.+.
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~--------------- 217 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS------NSEVVETINAG--------------- 217 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHhCC---------------
Confidence 1234568999999988889999999999999999998 999986432 11111111000
Q ss_pred cchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 350 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.....+...+.++.+|+.+||+.+|++|||+.+++++
T Consensus 218 --------------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 218 --------------------------FRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred --------------------------CCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0000112235689999999999999999999999864
No 334
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.3e-34 Score=280.60 Aligned_cols=248 Identities=23% Similarity=0.346 Sum_probs=190.5
Q ss_pred CCceEEEEeecccCceEEEEEEeC-------CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-------RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-------~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
.++|.+.++||+|+||.||+|++. .....+|+|.++... .....+.+|+++++.+. .|+||+++++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~ 85 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-----KHKNIINLLG 85 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----CCCCeeeEEE
Confidence 378999999999999999999753 235679999877432 33456788999998884 6999999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSR--------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDL 170 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Di 170 (447)
++... ...+++|||+ +++|.+++.... ...++...+..++.|++.||.|||++ ||+||||
T Consensus 86 ~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dl 160 (314)
T cd05099 86 VCTQE----GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDL 160 (314)
T ss_pred EEccC----CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-Ceeeccc
Confidence 88743 5799999999 889998886532 12377888999999999999999996 9999999
Q ss_pred CCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCC
Q 013220 171 KPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG 250 (447)
Q Consensus 171 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (447)
||+||++.
T Consensus 161 kp~Nill~------------------------------------------------------------------------ 168 (314)
T cd05099 161 AARNVLVT------------------------------------------------------------------------ 168 (314)
T ss_pred cceeEEEc------------------------------------------------------------------------
Confidence 99999993
Q ss_pred cccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCc
Q 013220 251 IDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCED 324 (447)
Q Consensus 251 ~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~ 324 (447)
.+..++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+ .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~------~ 242 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP------V 242 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC------H
Confidence 35679999999997543211 11123467999999988889999999999999999998 888886542 1
Q ss_pred hHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC
Q 013220 325 EDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 404 (447)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp 404 (447)
......+. .. .....+...+.++.++|.+||..||++||
T Consensus 243 ~~~~~~~~----~~-------------------------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 281 (314)
T cd05099 243 EELFKLLR----EG-------------------------------------HRMDKPSNCTHELYMLMRECWHAVPTQRP 281 (314)
T ss_pred HHHHHHHH----cC-------------------------------------CCCCCCCCCCHHHHHHHHHHcCCCcccCc
Confidence 11111100 00 00112334466888999999999999999
Q ss_pred ChHHHhc
Q 013220 405 TAQQCLQ 411 (447)
Q Consensus 405 ta~elL~ 411 (447)
|+.++++
T Consensus 282 s~~~ll~ 288 (314)
T cd05099 282 TFKQLVE 288 (314)
T ss_pred CHHHHHH
Confidence 9999985
No 335
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.9e-34 Score=278.60 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=191.0
Q ss_pred CCceEEEEeecccCceEEEEEEe-----CCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYD-----TRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
..+|.+.++||+|+||.||++.. ..++..+|+|.++.. ......+.+|+++++.+ .|+||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~ 77 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL------QHQHIVRFYGVCT 77 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC------CCCCCceEEEEEe
Confidence 46899999999999999999964 234678999976543 33356788999999999 7889999999877
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhcc-------------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCC
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRY-------------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPEN 174 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~-------------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~N 174 (447)
. +...+++|||+ +++|.+++..... ..+++..+..++.|++.||+|||+. ||+|+||||+|
T Consensus 78 ~----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~n 152 (280)
T cd05092 78 E----GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRN 152 (280)
T ss_pred c----CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHhh
Confidence 5 36789999999 8899888764321 2378889999999999999999996 99999999999
Q ss_pred eEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccc
Q 013220 175 ILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR 254 (447)
Q Consensus 175 ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (447)
|++. ....
T Consensus 153 il~~------------------------------------------------------------------------~~~~ 160 (280)
T cd05092 153 CLVG------------------------------------------------------------------------QGLV 160 (280)
T ss_pred EEEc------------------------------------------------------------------------CCCC
Confidence 9993 3567
Q ss_pred eeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHH
Q 013220 255 CKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHL 328 (447)
Q Consensus 255 ~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~ 328 (447)
++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.... ....+
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~ 234 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS------NTEAI 234 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC------HHHHH
Confidence 9999999986443211 12234678999999998889999999999999999998 899986542 11111
Q ss_pred HHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHH
Q 013220 329 ALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ 408 (447)
Q Consensus 329 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~e 408 (447)
..+.. +. ....+...+..+.+||.+||+.||.+||++.+
T Consensus 235 ~~~~~--~~---------------------------------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ 273 (280)
T cd05092 235 ECITQ--GR---------------------------------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKD 273 (280)
T ss_pred HHHHc--Cc---------------------------------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 11100 00 01122344567889999999999999999999
Q ss_pred Hhc
Q 013220 409 CLQ 411 (447)
Q Consensus 409 lL~ 411 (447)
+++
T Consensus 274 l~~ 276 (280)
T cd05092 274 IHS 276 (280)
T ss_pred HHH
Confidence 974
No 336
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.4e-34 Score=279.66 Aligned_cols=260 Identities=24% Similarity=0.350 Sum_probs=192.8
Q ss_pred ceEEEEeecccCceEEEEEEe----CCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYD----TRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
-|++.++||+|+||.||+|+. ..++..||+|.++.. ......+.+|+++++.+ .|+||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL------YHENIVKYKGICTED 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC------CCCCeeeeeeEEecC
Confidence 478999999999999999973 456889999987643 23345788999999999 789999999987653
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
++...++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++
T Consensus 79 --~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~----------- 143 (284)
T cd05079 79 --GGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVE----------- 143 (284)
T ss_pred --CCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEc-----------
Confidence 345789999999 889998875432 3478899999999999999999997 999999999999993
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
.+..++|+|||.+......
T Consensus 144 -------------------------------------------------------------~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 144 -------------------------------------------------------------SEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred -------------------------------------------------------------CCCCEEECCCccccccccC
Confidence 3556999999998654322
Q ss_pred c------ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 270 F------AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 270 ~------~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
. ....++..|+|||.+.+..++.++|||||||++|+|++++.|+..... ......+......
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~-----------~~~~~~~~~~~~~- 230 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT-----------LFLKMIGPTHGQM- 230 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc-----------hhhhhcccccccc-
Confidence 1 123467789999999888899999999999999999998776543210 0011111110000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhh--hhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLV--DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.+. . ....+. .....+...+..+.+||.+||+.||++|||+++++++
T Consensus 231 --------~~~------~--------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 231 --------TVT------R--------LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred --------cHH------H--------HHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 000 0 000000 0111233456789999999999999999999999864
No 337
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=287.45 Aligned_cols=264 Identities=25% Similarity=0.368 Sum_probs=199.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHh-HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF-AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+.|.-...||+|+||.||+|....+ ..||||.+...... ..+|.+|++++.++ +|+|+|++++++.+..
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l------~H~Nlv~LlGyC~e~~--- 144 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRL------RHPNLVKLLGYCLEGG--- 144 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcC------CCcCcccEEEEEecCC---
Confidence 5688889999999999999986544 89999987766544 56699999999999 8999999999998642
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCC--cccccCCCCCeEeeecCCCCCCcccCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELG--IIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~g--IiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
.+.++|+||| .|+|.+.+.......+++.....|+.+++.||+|||..+. |||||||+.|||+
T Consensus 145 ~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL-------------- 210 (361)
T KOG1187|consen 145 EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL-------------- 210 (361)
T ss_pred ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE--------------
Confidence 1699999999 7899988865432268999999999999999999999653 9999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-cc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QF 270 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~-~~ 270 (447)
+.++++||+|||+|+.... ..
T Consensus 211 ----------------------------------------------------------D~~~~aKlsDFGLa~~~~~~~~ 232 (361)
T KOG1187|consen 211 ----------------------------------------------------------DEDFNAKLSDFGLAKLGPEGDT 232 (361)
T ss_pred ----------------------------------------------------------CCCCCEEccCccCcccCCcccc
Confidence 6688999999999965443 22
Q ss_pred c--cC-CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 271 A--EE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 271 ~--~~-~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
. .. .||..|+|||++.....+.|+|||||||+++++++|+.+.......+ ...........+...
T Consensus 233 ~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~---~~~l~~w~~~~~~~~--------- 300 (361)
T KOG1187|consen 233 SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRG---ELSLVEWAKPLLEEG--------- 300 (361)
T ss_pred ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcc---cccHHHHHHHHHHCc---------
Confidence 2 22 78999999999988889999999999999999999997776432111 111222222221111
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCCh-hhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE-TDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
+..+. .+..+.. ..++. .....+..+..+|++.+|.+||++.|+++
T Consensus 301 ~~~ei-----------------iD~~l~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 301 KLREI-----------------VDPRLKE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred chhhe-----------------eCCCccC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 00000 0111110 11222 34556889999999999999999999753
No 338
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.4e-34 Score=278.41 Aligned_cols=254 Identities=22% Similarity=0.336 Sum_probs=189.8
Q ss_pred CCceEEEEeecccCceEEEEEEeC----------------CCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCC
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT----------------RTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSN 96 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~----------------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~ 96 (447)
.++|++.++||+|+||+||+|.+. .+...||+|++... ......+.+|+++++.+ .
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l------~ 77 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL------K 77 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC------C
Confidence 368999999999999999998543 23457999988753 23456788999999999 7
Q ss_pred cceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhcc---------CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q 013220 97 EKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY---------KGLELNKVREICKYILTGLDYLHRELGII 166 (447)
Q Consensus 97 ~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~---------~~l~~~~~~~i~~qil~aL~~lH~~~gIi 166 (447)
|+||+++++++... +..+++|||+ +++|.+++..... ..+++..+..++.|++.||+|||+. ||+
T Consensus 78 ~~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~ 152 (296)
T cd05095 78 DPNIIRLLAVCITS----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-NFV 152 (296)
T ss_pred CCCcceEEEEEecC----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-Cee
Confidence 89999999988753 6789999999 7899888764321 2366778999999999999999996 999
Q ss_pred cccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCc
Q 013220 167 HTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPER 246 (447)
Q Consensus 167 H~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (447)
|+||||+||+++
T Consensus 153 H~dlkp~Nili~-------------------------------------------------------------------- 164 (296)
T cd05095 153 HRDLATRNCLVG-------------------------------------------------------------------- 164 (296)
T ss_pred cccCChheEEEc--------------------------------------------------------------------
Confidence 999999999993
Q ss_pred cCCCcccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh--CCCCCCCCCCC
Q 013220 247 CLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQ 319 (447)
Q Consensus 247 ~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~--g~~Pf~~~~~~ 319 (447)
....++|+|||++....... ....++..|+|||...+..++.++|+|||||++|+|++ |..||...+
T Consensus 165 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05095 165 ----KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS-- 238 (296)
T ss_pred ----CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC--
Confidence 35679999999986543221 11234678999999888889999999999999999998 778886542
Q ss_pred CCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccC
Q 013220 320 GFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFT 399 (447)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d 399 (447)
....+....+. +..... ......+...+..+.+|+.+||+.|
T Consensus 239 ----~~~~~~~~~~~------------------~~~~~~----------------~~~~~~~~~~~~~~~~li~~cl~~~ 280 (296)
T cd05095 239 ----DEQVIENTGEF------------------FRDQGR----------------QVYLPKPALCPDSLYKLMLSCWRRN 280 (296)
T ss_pred ----hHHHHHHHHHH------------------Hhhccc----------------cccCCCCCCCCHHHHHHHHHHcCCC
Confidence 11111111000 000000 0000112334568899999999999
Q ss_pred CCCCCChHHHhc
Q 013220 400 PEKRPTAQQCLQ 411 (447)
Q Consensus 400 P~kRpta~elL~ 411 (447)
|++|||+.++++
T Consensus 281 p~~Rp~~~~i~~ 292 (296)
T cd05095 281 AKERPSFQEIHA 292 (296)
T ss_pred cccCCCHHHHHH
Confidence 999999999874
No 339
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.4e-34 Score=274.77 Aligned_cols=246 Identities=19% Similarity=0.295 Sum_probs=191.5
Q ss_pred CCceEEEEeecccCceEEEEEEeCCC---CeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRT---SSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
..+|.+.++||.|+||.||+|.+... ...|++|..... ....+.+.+|+++++.+ .|+||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF------DHPHIVKLIGVITE 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC------CCCchhceeEEEcC
Confidence 46799999999999999999986543 457899976654 33456788999999999 78999999998764
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
...++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||||+||+++
T Consensus 79 -----~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~---------- 141 (270)
T cd05056 79 -----NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVS---------- 141 (270)
T ss_pred -----CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEe----------
Confidence 3578999999 889998886533 3488999999999999999999996 999999999999993
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
....++|+|||++.....
T Consensus 142 --------------------------------------------------------------~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 142 --------------------------------------------------------------SPDCVKLGDFGLSRYLED 159 (270)
T ss_pred --------------------------------------------------------------cCCCeEEccCceeeeccc
Confidence 345799999999865433
Q ss_pred cc----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 269 QF----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 269 ~~----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.. ....++..|+|||.+....++.++|||||||++|++++ |..||...+. ......+.. +
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~~~~~~~~~--~------- 224 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN------NDVIGRIEN--G------- 224 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHc--C-------
Confidence 21 11223567999999988889999999999999999986 9999965531 111111100 0
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.....+...+..+.++|.+||..+|++|||+.+++..
T Consensus 225 --------------------------------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 225 --------------------------------ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred --------------------------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0111233456789999999999999999999998754
No 340
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=9.2e-34 Score=272.65 Aligned_cols=245 Identities=19% Similarity=0.305 Sum_probs=189.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCe---EEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSS---YVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
++|+..+.||+|+||.||+|.+..++. .+|+|.++.. ....+.+..|+++++.+ .|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~ 78 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF------SHHNIIRLEGVVTKF 78 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC------CCCCeeEEEEEEccC
Confidence 589999999999999999998765543 7999987643 23356788899999888 788999999988754
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
...++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||||+||++
T Consensus 79 ----~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili------------ 140 (268)
T cd05063 79 ----KPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILV------------ 140 (268)
T ss_pred ----CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEE------------
Confidence 6789999999 778888775432 4588899999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+....++|+|||++......
T Consensus 141 ------------------------------------------------------------~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 141 ------------------------------------------------------------NSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred ------------------------------------------------------------cCCCcEEECCCccceecccc
Confidence 33567999999998654322
Q ss_pred cccC------CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 270 FAEE------IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 270 ~~~~------~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
.... ..+..|+|||.+.+..++.++|+|||||++|++++ |..||...+ .......+.. ...
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~------~~~~~~~i~~-~~~----- 228 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS------NHEVMKAIND-GFR----- 228 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhc-CCC-----
Confidence 1111 12456999999988888999999999999999987 999996542 1111111111 000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
...+...+.++.+++.+||+.+|++||++.++++
T Consensus 229 -----------------------------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 229 -----------------------------------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -----------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0011223567889999999999999999999975
No 341
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.9e-35 Score=305.82 Aligned_cols=245 Identities=23% Similarity=0.398 Sum_probs=202.8
Q ss_pred CceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
++-++.++||+|.||.||+|+-. .....||||.++..+. ..++|.+|++++..+ +|+|||++++++.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l------~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL------QHPNIVRLLGVCR 559 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc------cCCCeEEEEEEEc
Confidence 45678899999999999999643 3467899999887654 467999999999999 8999999999998
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhc--------cC----CCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCe
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSR--------YK----GLELNKVREICKYILTGLDYLHRELGIIHTDLKPENI 175 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--------~~----~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Ni 175 (447)
. ++.+|+|+||| .|+|..++.... .. +++..+...|+.||+.|+.||-+. ..|||||-.+|+
T Consensus 560 ~----~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLATRNC 634 (774)
T KOG1026|consen 560 E----GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLATRNC 634 (774)
T ss_pred c----CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchhhhhc
Confidence 4 58999999999 899999885432 11 277889999999999999999996 999999999999
Q ss_pred EeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccce
Q 013220 176 LLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRC 255 (447)
Q Consensus 176 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (447)
|| .....|
T Consensus 635 LV------------------------------------------------------------------------ge~l~V 642 (774)
T KOG1026|consen 635 LV------------------------------------------------------------------------GENLVV 642 (774)
T ss_pred ee------------------------------------------------------------------------ccceEE
Confidence 99 447889
Q ss_pred eEeecCcccccccccccCC-----CCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHH
Q 013220 256 KVVDFGNACRANKQFAEEI-----QTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLA 329 (447)
Q Consensus 256 kL~Dfg~a~~~~~~~~~~~-----gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~ 329 (447)
|++|||+++..-......+ -+.+|||||.|....||+++||||+||+|||+++ |..||.+.+ +...++
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS------n~EVIe 716 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS------NQEVIE 716 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc------hHHHHH
Confidence 9999999975433333333 3679999999999999999999999999999996 999998874 444444
Q ss_pred HHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHH
Q 013220 330 LMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC 409 (447)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~el 409 (447)
.+.+- .-..-|++.|.++.+|+..||+.+|.+||+++||
T Consensus 717 ~i~~g-----------------------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 717 CIRAG-----------------------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred HHHcC-----------------------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 44321 0123567889999999999999999999999998
Q ss_pred h
Q 013220 410 L 410 (447)
Q Consensus 410 L 410 (447)
-
T Consensus 756 ~ 756 (774)
T KOG1026|consen 756 H 756 (774)
T ss_pred H
Confidence 4
No 342
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.3e-34 Score=275.01 Aligned_cols=244 Identities=19% Similarity=0.278 Sum_probs=179.4
Q ss_pred EeecccCceEEEEEEeCC------------CCeEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 42 RKLGWGQFSIVWLAYDTR------------TSSYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~------------~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
+.||+|+||.||+|+... ....+++|++.... .....+.+|+.+++.+ +|+||+++++++.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l------~hp~iv~~~~~~~ 74 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV------SHKHIVLLYGVCV 74 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC------CCCCEeeEEEEEe
Confidence 468999999999997432 23468899876543 2344677888888888 8999999999887
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.. ...+++|||+ ++.|..++.. ....+++..+..++.|++.||+|||++ ||+||||||+||++......
T Consensus 75 ~~----~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~---- 144 (262)
T cd05077 75 RD----VENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGID---- 144 (262)
T ss_pred cC----CCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCcc----
Confidence 43 5789999999 6677666543 234589999999999999999999996 99999999999999542100
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
......++++|||.+....
T Consensus 145 -------------------------------------------------------------~~~~~~~~l~d~g~~~~~~ 163 (262)
T cd05077 145 -------------------------------------------------------------GECGPFIKLSDPGIPITVL 163 (262)
T ss_pred -------------------------------------------------------------CCCCceeEeCCCCCCcccc
Confidence 0122348999999886543
Q ss_pred cccccCCCCCCccChHHhh-cCCCCccchhHhHHHHHHHHh-hCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 268 KQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 268 ~~~~~~~gt~~y~aPE~l~-~~~~~~~~DiwSlGvil~~l~-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
.. ....++..|+|||.+. +..++.++|||||||++|+|+ .|..||..... ... ....
T Consensus 164 ~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-------~~~---~~~~---------- 222 (262)
T cd05077 164 SR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-------AEK---ERFY---------- 222 (262)
T ss_pred Cc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-------hHH---HHHH----------
Confidence 22 3346788999999987 456889999999999999997 58888754320 000 0000
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
..........+..+.+||.+||+.||++||++.++|++
T Consensus 223 -----------------------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 223 -----------------------------EGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -----------------------------hcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 00001112234578899999999999999999999875
No 343
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.6e-34 Score=278.94 Aligned_cols=249 Identities=21% Similarity=0.338 Sum_probs=191.7
Q ss_pred CCceEEEEeecccCceEEEEEEeC-------CCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-------RTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
.++|.+.+.||+|+||.||+|++. ..+..||+|..+.. ....+.+.+|+++++.+. .|+||+++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~ 88 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLG 88 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-----cCCCchheeE
Confidence 578999999999999999999742 23457999987643 233467889999999885 6899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY--------------KGLELNKVREICKYILTGLDYLHRELGIIHTDL 170 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Di 170 (447)
.+... ...+++|||+ +++|.+++..... ..++...+..++.|++.||+|||++ ||+||||
T Consensus 89 ~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH~dl 163 (304)
T cd05101 89 ACTQD----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDL 163 (304)
T ss_pred EEecC----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-Ceeeccc
Confidence 88753 6789999999 7899988865321 2367778899999999999999997 9999999
Q ss_pred CCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCC
Q 013220 171 KPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG 250 (447)
Q Consensus 171 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (447)
||+||++.
T Consensus 164 kp~Nili~------------------------------------------------------------------------ 171 (304)
T cd05101 164 AARNVLVT------------------------------------------------------------------------ 171 (304)
T ss_pred ccceEEEc------------------------------------------------------------------------
Confidence 99999993
Q ss_pred cccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCc
Q 013220 251 IDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCED 324 (447)
Q Consensus 251 ~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~ 324 (447)
....++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+ .
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~ 245 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------V 245 (304)
T ss_pred CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------H
Confidence 34679999999987553211 11234578999999988889999999999999999998 788886442 1
Q ss_pred hHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC
Q 013220 325 EDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 404 (447)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp 404 (447)
. .+.+.+.... ....+...+..+.+||.+||+.+|.+||
T Consensus 246 ~----~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp 284 (304)
T cd05101 246 E----ELFKLLKEGH-------------------------------------RMDKPANCTNELYMMMRDCWHAIPSHRP 284 (304)
T ss_pred H----HHHHHHHcCC-------------------------------------cCCCCCCCCHHHHHHHHHHcccChhhCC
Confidence 1 1111110000 0012234467899999999999999999
Q ss_pred ChHHHhcC
Q 013220 405 TAQQCLQH 412 (447)
Q Consensus 405 ta~elL~h 412 (447)
|+.++++.
T Consensus 285 s~~e~l~~ 292 (304)
T cd05101 285 TFKQLVED 292 (304)
T ss_pred CHHHHHHH
Confidence 99999865
No 344
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=9.5e-34 Score=270.66 Aligned_cols=240 Identities=25% Similarity=0.323 Sum_probs=187.5
Q ss_pred EeecccCceEEEEEEeCC-C--CeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTR-T--SSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~-~--~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.||+|++|+||+|.+.. . ...||+|.+..... ..+.+..|+++++.+ .|+||+++++.+.. ..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~-----~~ 69 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL------DHENLIRLYGVVLT-----HP 69 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc------CCCCccceeEEEcC-----Ce
Confidence 468999999999998755 2 33699998776543 456788999999999 78999999998764 57
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.++||||+ +++|.+.+.......+++..+..++.|++.||+|||++ |++|+||||+||++.
T Consensus 70 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~----------------- 131 (257)
T cd05040 70 LMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLA----------------- 131 (257)
T ss_pred EEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEe-----------------
Confidence 99999999 88999888654324588999999999999999999997 999999999999993
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc-----
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----- 270 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~----- 270 (447)
....++|+|||.+.......
T Consensus 132 -------------------------------------------------------~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 132 -------------------------------------------------------SDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred -------------------------------------------------------cCCEEEeccccccccccccccceec
Confidence 35679999999987654321
Q ss_pred -ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 -~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
....++..|+|||.+....++.++|||||||++|+|++ |..||...+ .......+.. ..
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~----~~--------- 217 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS------GSQILKKIDK----EG--------- 217 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHh----cC---------
Confidence 12345778999999988889999999999999999998 999986432 1111111110 00
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.+++.+||+.+|++|||+.++++
T Consensus 218 ---------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 218 ---------------------------ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ---------------------------CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 000122334668899999999999999999999975
No 345
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.7e-34 Score=274.44 Aligned_cols=241 Identities=22% Similarity=0.305 Sum_probs=184.5
Q ss_pred EeecccCceEEEEEEeCCCCe--EEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSS--YVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|++..++. .+++|..+.. ....+.+..|+++++.+. +|+||+++++.+... ...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~----~~~ 71 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHR----GYL 71 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-----cCCCeeeEEEEEecC----CCc
Confidence 358999999999999877764 5688877642 344567888999999985 689999999998754 578
Q ss_pred EEEEecc-cccHHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCC
Q 013220 118 CMVLEFL-GDSLLRLIKYSR--------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTID 182 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~ 182 (447)
+++|||+ +++|.+++.... ...+++..+..++.|++.||+|||++ |++|+||||+||++
T Consensus 72 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili----- 145 (270)
T cd05047 72 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILV----- 145 (270)
T ss_pred eEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEE-----
Confidence 9999999 889998886432 12478889999999999999999996 99999999999999
Q ss_pred CCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCc
Q 013220 183 PSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGN 262 (447)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~ 262 (447)
+....++|+|||+
T Consensus 146 -------------------------------------------------------------------~~~~~~kl~dfgl 158 (270)
T cd05047 146 -------------------------------------------------------------------GENYVAKIADFGL 158 (270)
T ss_pred -------------------------------------------------------------------cCCCeEEECCCCC
Confidence 3356799999999
Q ss_pred cccccccccc--CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 263 ACRANKQFAE--EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 263 a~~~~~~~~~--~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
+......... ...+..|+|||.+....++.++|+|||||++|+|++ |..||...+ .......+. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~------~~~~~~~~~---~~-- 227 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLP---QG-- 227 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC------HHHHHHHHh---CC--
Confidence 8533322111 223567999999988889999999999999999996 999996542 111111100 00
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+.++.+++.+||..||.+|||+.+++.
T Consensus 228 ------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 228 ------------------------------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------------------------------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 000122234567889999999999999999999985
No 346
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.7e-34 Score=283.42 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=191.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCC-------CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTR-------TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
..+|++.+.||+|+||.||+|++.. ....||+|+++.. ....+.+.+|+++++.+. .|+||+++++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~ 85 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG-----KHKNIINLLG 85 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc-----CCCCeeeeeE
Confidence 4689999999999999999997643 2347899987753 233567889999999885 6899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSR--------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDL 170 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Di 170 (447)
.+... ...+++|||+ +++|.+++.... ...++...+..++.|++.||+|||++ ||+||||
T Consensus 86 ~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~dl 160 (334)
T cd05100 86 ACTQD----GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDL 160 (334)
T ss_pred EEccC----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-Ceecccc
Confidence 88753 5799999999 789998886432 12366778889999999999999996 9999999
Q ss_pred CCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCC
Q 013220 171 KPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG 250 (447)
Q Consensus 171 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (447)
||+||++.
T Consensus 161 kp~Nill~------------------------------------------------------------------------ 168 (334)
T cd05100 161 AARNVLVT------------------------------------------------------------------------ 168 (334)
T ss_pred ccceEEEc------------------------------------------------------------------------
Confidence 99999993
Q ss_pred cccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCc
Q 013220 251 IDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCED 324 (447)
Q Consensus 251 ~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~ 324 (447)
....++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+ .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~ 242 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------V 242 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------H
Confidence 34579999999986543221 11223467999999998889999999999999999998 888886542 1
Q ss_pred hHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC
Q 013220 325 EDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 404 (447)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp 404 (447)
......+. .. .....+...+..+.+|+.+||+.+|++||
T Consensus 243 ~~~~~~~~---~~--------------------------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 281 (334)
T cd05100 243 EELFKLLK---EG--------------------------------------HRMDKPANCTHELYMIMRECWHAVPSQRP 281 (334)
T ss_pred HHHHHHHH---cC--------------------------------------CCCCCCCCCCHHHHHHHHHHcccChhhCc
Confidence 11111110 00 00112233456888999999999999999
Q ss_pred ChHHHhcCc
Q 013220 405 TAQQCLQHP 413 (447)
Q Consensus 405 ta~elL~hp 413 (447)
|+.+++++-
T Consensus 282 s~~ell~~l 290 (334)
T cd05100 282 TFKQLVEDL 290 (334)
T ss_pred CHHHHHHHH
Confidence 999999874
No 347
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-33 Score=271.05 Aligned_cols=237 Identities=21% Similarity=0.364 Sum_probs=182.9
Q ss_pred eecccCceEEEEEEeC--CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEE
Q 013220 43 KLGWGQFSIVWLAYDT--RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLC 118 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~ 118 (447)
.||+|+||.||+|.+. .++..||+|+..... ...+.+.+|+++++.+ .|+||+++++.+.. ...+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l------~h~~ii~~~~~~~~-----~~~~ 70 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL------DNPYIVRMIGVCEA-----EALM 70 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc------CCCCeEEEEEEEcC-----CCeE
Confidence 4899999999999764 446679999876542 3345688999999999 78999999998643 4689
Q ss_pred EEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcC
Q 013220 119 MVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILE 197 (447)
Q Consensus 119 lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~ 197 (447)
+||||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ |++||||||+||++.
T Consensus 71 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~------------------- 129 (257)
T cd05115 71 LVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLV------------------- 129 (257)
T ss_pred EEEEeCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEc-------------------
Confidence 999999 788888775432 4589999999999999999999996 999999999999993
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc------
Q 013220 198 RPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA------ 271 (447)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~------ 271 (447)
....++|+|||++........
T Consensus 130 -----------------------------------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 130 -----------------------------------------------------NQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred -----------------------------------------------------CCCcEEeccCCccccccCCccceeccC
Confidence 356799999999864432211
Q ss_pred cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 272 EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 272 ~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
...++..|+|||.+.+..++.++|+|||||++|++++ |..||.... .......+.+ +
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~--~-------------- 214 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK------GPEVMSFIEQ--G-------------- 214 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC------HHHHHHHHHC--C--------------
Confidence 1123568999999988888999999999999999996 999996542 1111111100 0
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...++++.++|.+||..||++||++.++++
T Consensus 215 -------------------------~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 215 -------------------------KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -------------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011233445678999999999999999999999864
No 348
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.1e-35 Score=311.92 Aligned_cols=254 Identities=27% Similarity=0.447 Sum_probs=196.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC--
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP-- 112 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~-- 112 (447)
.|...+.||+||||.||+++++-+|+.||||.+... ......+.+|+.+|.++ +|||||+|+.+|.....
T Consensus 480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL------nHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL------NHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc------CCcceeeeehhhhccCCcc
Confidence 477888899999999999999999999999976655 45566889999999999 89999999999865210
Q ss_pred ------------------------------------------------------------------------C-------
Q 013220 113 ------------------------------------------------------------------------N------- 113 (447)
Q Consensus 113 ------------------------------------------------------------------------~------- 113 (447)
+
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence 0
Q ss_pred --------------------------c--------ceEEEEEecccccHHH-HHHhhccCCCCHHHHHHHHHHHHHHHHH
Q 013220 114 --------------------------G--------QHLCMVLEFLGDSLLR-LIKYSRYKGLELNKVREICKYILTGLDY 158 (447)
Q Consensus 114 --------------------------~--------~~~~lvmE~~~~~L~~-~~~~~~~~~l~~~~~~~i~~qil~aL~~ 158 (447)
. ..+||-||||..++.+ ++.++.. .-......+++++|++||+|
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-NSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-chhhHHHHHHHHHHHHHHHH
Confidence 0 4589999999655554 4444332 11467889999999999999
Q ss_pred HHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCC
Q 013220 159 LHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGG 238 (447)
Q Consensus 159 lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (447)
+|+. |||||||||.||++
T Consensus 713 IH~~-giIHRDLKP~NIFL------------------------------------------------------------- 730 (1351)
T KOG1035|consen 713 IHDQ-GIIHRDLKPRNIFL------------------------------------------------------------- 730 (1351)
T ss_pred HHhC-ceeeccCCcceeEE-------------------------------------------------------------
Confidence 9995 99999999999999
Q ss_pred CCCCCCCccCCCcccceeEeecCcccccc---------------------cccccCCCCCCccChHHhhcCC---CCccc
Q 013220 239 IELPKPERCLDGIDMRCKVVDFGNACRAN---------------------KQFAEEIQTRQYRAPEVILRAG---YSFSV 294 (447)
Q Consensus 239 ~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---------------------~~~~~~~gt~~y~aPE~l~~~~---~~~~~ 294 (447)
+....|||+|||+|+... ...+..+||.-|+|||++.+.. |+.|+
T Consensus 731 -----------d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~Ki 799 (1351)
T KOG1035|consen 731 -----------DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKI 799 (1351)
T ss_pred -----------cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchh
Confidence 446779999999996510 1245568999999999998754 99999
Q ss_pred hhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHh-CCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHH
Q 013220 295 DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI-GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRL 373 (447)
Q Consensus 295 DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (447)
||||||||+++|+ +||. +...-...+..+. |..|.+
T Consensus 800 DmYSLGIVlFEM~---yPF~--------TsMERa~iL~~LR~g~iP~~-------------------------------- 836 (1351)
T KOG1035|consen 800 DMYSLGIVLFEML---YPFG--------TSMERASILTNLRKGSIPEP-------------------------------- 836 (1351)
T ss_pred hhHHHHHHHHHHh---ccCC--------chHHHHHHHHhcccCCCCCC--------------------------------
Confidence 9999999999999 4564 2334444444332 222221
Q ss_pred hhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 374 LVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 374 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
.++..+....-..+|+.||+.||.+||||.|+|++.||-.
T Consensus 837 ----~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 837 ----ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred ----cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 1122333445668999999999999999999999999984
No 349
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=6e-34 Score=275.61 Aligned_cols=260 Identities=23% Similarity=0.315 Sum_probs=194.8
Q ss_pred CceEEEEeecccCceEEEEEEeC----CCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDT----RTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
..|++.+.||+|+||.||+|+.. .++..||+|+++.... ....+.+|+++++.+ .|+||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l------~~~~i~~~~~~~~~ 77 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL------DHENIVKYKGVCEK 77 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC------CCCChheEEeeeec
Confidence 57889999999999999999854 3488999998876544 366889999999998 78899999988765
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
. .+...+++|||+ +++|.+++.... ..+++..+..++.|++.||+|||++ ||+|+||||+||++
T Consensus 78 ~--~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~----------- 142 (284)
T cd05038 78 P--GGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILV----------- 142 (284)
T ss_pred C--CCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEE-----------
Confidence 3 356899999999 889988886433 2488899999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+.+..++|+|||.+.....
T Consensus 143 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 143 -------------------------------------------------------------ESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred -------------------------------------------------------------cCCCCEEEccccccccccc
Confidence 3356799999999976542
Q ss_pred ccc------cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 269 QFA------EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 269 ~~~------~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
... ...++..|+|||.+.+..++.++|+|||||++|+|++|..||........ ...+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-----------~~~~~~~~~- 229 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL-----------RMIGIAQGQ- 229 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhc-----------ccccccccc-
Confidence 211 12345679999999888899999999999999999999999865421110 000000000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhh--cCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDK--YRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
. . ...+...+... ...+...+.++.+|+.+||+.+|++|||+.|+++
T Consensus 230 -----~---------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 230 -----M---------I--------VTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred -----c---------c--------HHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 0 00000000000 1122334568999999999999999999999975
No 350
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.8e-34 Score=273.12 Aligned_cols=245 Identities=19% Similarity=0.325 Sum_probs=190.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCe---EEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSS---YVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
+.|++.+.||.|+||.||+|.+..++. .||+|+++.. ......+..|+.+++.+ .|+||+++++.+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~ni~~~~~~~~~- 76 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF------DHPNIIHLEGVVTK- 76 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC------CCcCcceEEEEECC-
Confidence 569999999999999999998876654 6999987653 33456788999999998 78999999998864
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+...++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ |++|+||||+||++
T Consensus 77 ---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili------------ 139 (269)
T cd05065 77 ---SRPVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILV------------ 139 (269)
T ss_pred ---CCceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEE------------
Confidence 46789999999 778888876432 4578899999999999999999996 99999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+....++|+|||.+......
T Consensus 140 ------------------------------------------------------------~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 140 ------------------------------------------------------------NSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ------------------------------------------------------------cCCCcEEECCCccccccccC
Confidence 33567999999988644321
Q ss_pred cc-----cCC---CCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 270 FA-----EEI---QTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 270 ~~-----~~~---gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
.. ... .+..|+|||.+.+..++.++|+|||||++|++++ |..||...+ .......+. ...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~------~~~~~~~i~---~~~-- 228 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------NQDVINAIE---QDY-- 228 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC------HHHHHHHHH---cCC--
Confidence 11 111 1347999999998889999999999999999886 999996542 111111110 000
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
..+.+...+..+.+++.+||..+|.+||++.+++.
T Consensus 229 ------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 229 ------------------------------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred ------------------------------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01122334567889999999999999999999985
No 351
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1e-33 Score=274.29 Aligned_cols=249 Identities=19% Similarity=0.279 Sum_probs=193.1
Q ss_pred cCCceEEEEeecccCceEEEEEEeCC----CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDTR----TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~~----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.+.+|++.+.||+|+||.||+|.+.. ++..|++|.++.. ......+.+|+++++.+ +|+||+++++++
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l------~h~ni~~~~~~~ 77 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL------SHQNILPILHVC 77 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC------CCCCCCeEEEEE
Confidence 35789999999999999999998765 3688999987643 23356788899999999 899999999976
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeec
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVST 180 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~ 180 (447)
... +...+++++|+ +++|.+++..... ..+++..+..++.|++.||+|||++ +++|+||||+||++.
T Consensus 78 ~~~---~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~-- 151 (280)
T cd05043 78 IED---GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVID-- 151 (280)
T ss_pred ecC---CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEc--
Confidence 642 35789999999 7889888765322 3488999999999999999999996 999999999999993
Q ss_pred CCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeec
Q 013220 181 IDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDF 260 (447)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Df 260 (447)
....++|+||
T Consensus 152 ----------------------------------------------------------------------~~~~~kl~d~ 161 (280)
T cd05043 152 ----------------------------------------------------------------------EELQVKITDN 161 (280)
T ss_pred ----------------------------------------------------------------------CCCcEEECCC
Confidence 3567999999
Q ss_pred Cccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHH
Q 013220 261 GNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMEL 334 (447)
Q Consensus 261 g~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 334 (447)
|++....... ....++..|+|||.+.+..++.++|||||||++|++++ |..||...+. ..+.. .+
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~--~~ 232 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-------FEMAA--YL 232 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-------HHHHH--HH
Confidence 9986543221 11235678999999998889999999999999999998 9999965321 11111 00
Q ss_pred hCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 335 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.... ....+...++++.+++.+||..||++|||+.++++
T Consensus 233 ~~~~--------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 233 KDGY--------------------------------------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HcCC--------------------------------------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0000 00111223568899999999999999999999984
No 352
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=8.4e-34 Score=273.94 Aligned_cols=249 Identities=21% Similarity=0.360 Sum_probs=192.4
Q ss_pred CCceEEEEeecccCceEEEEEEeCC-----CCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTR-----TSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
..+|++.+.||.|+||.||+|+... ..+.|++|....... ....+.+|+++++.+ +|+||+++++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~ 77 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL------SHKNVVRLLGLC 77 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc------CCcceeeeEEEE
Confidence 3679999999999999999998643 357899997765432 356788999999999 789999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeee
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY-------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~-------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
.. ....++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ ||+|+||||+||++.
T Consensus 78 ~~----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~- 151 (275)
T cd05046 78 RE----AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVS- 151 (275)
T ss_pred CC----CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEe-
Confidence 64 36789999999 7899988865431 1488999999999999999999996 999999999999993
Q ss_pred cCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEee
Q 013220 180 TIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVD 259 (447)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~D 259 (447)
....++++|
T Consensus 152 -----------------------------------------------------------------------~~~~~~l~~ 160 (275)
T cd05046 152 -----------------------------------------------------------------------SQREVKVSL 160 (275)
T ss_pred -----------------------------------------------------------------------CCCcEEEcc
Confidence 356789999
Q ss_pred cCcccccccc----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHH
Q 013220 260 FGNACRANKQ----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMEL 334 (447)
Q Consensus 260 fg~a~~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 334 (447)
||++...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.... ....+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~------~~~~~~~~~-- 232 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS------DEEVLNRLQ-- 232 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc------hHHHHHHHH--
Confidence 9988543211 122345677999999988888899999999999999998 788886432 111111100
Q ss_pred hCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 335 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.+..+ ...+...+..+.+++.+||+.||++|||+.|++..
T Consensus 233 ~~~~~--------------------------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 233 AGKLE--------------------------------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred cCCcC--------------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 00000 01122346689999999999999999999999864
No 353
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.5e-34 Score=272.16 Aligned_cols=242 Identities=22% Similarity=0.324 Sum_probs=184.0
Q ss_pred EeecccCceEEEEEEeCCCC----------eEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 42 RKLGWGQFSIVWLAYDTRTS----------SYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~----------~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
+.||+|+||.||+|.+..++ ..+++|++.........+.+|+++++.+ +|+||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~-- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL------SHKHLVKLYGVCVR-- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC------CCcchhheeeEEec--
Confidence 46899999999999887666 4588887776554467788899999988 88999999998764
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...++||||+ +++|.+++.... ..++...+..++.|++.||+|||++ ||+|+||||+||++......
T Consensus 73 ---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~------- 140 (259)
T cd05037 73 ---DENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLN------- 140 (259)
T ss_pred ---CCcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccc-------
Confidence 3568999999 888988876543 2588999999999999999999996 99999999999999542100
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+.....++|+|||.+..... .
T Consensus 141 ----------------------------------------------------------~~~~~~~kl~Dfg~a~~~~~-~ 161 (259)
T cd05037 141 ----------------------------------------------------------EGYVPFIKLSDPGIPITVLS-R 161 (259)
T ss_pred ----------------------------------------------------------cCCceeEEeCCCCccccccc-c
Confidence 01233699999999875443 2
Q ss_pred ccCCCCCCccChHHhhcC--CCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 271 AEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+.. .......
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-------~~~~~~~-------------- 220 (259)
T cd05037 162 EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-------EKERFYQ-------------- 220 (259)
T ss_pred cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-------hHHHHHh--------------
Confidence 334567889999999876 68899999999999999998 57777544210 0000000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+......+.++|.+||+.+|++|||+.++++
T Consensus 221 ----------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 221 ----------------------------DQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----------------------------cCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000011111258889999999999999999999985
No 354
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.6e-34 Score=273.06 Aligned_cols=246 Identities=20% Similarity=0.316 Sum_probs=190.7
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCC---eEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTS---SYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
.++|++.+.||+|+||.||+|++..++ ..+|+|.++.. ......+.+|+++++.+ +|+||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~ 76 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF------DHPNIIHLEGVVTK 76 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC------CCCCcceEEEEEec
Confidence 368999999999999999999876443 47999987643 23345788899999998 78999999998864
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
++..++||||+ +++|.+.+.... ..++...+..++.|++.||++||+. |++|+||||+||++
T Consensus 77 ----~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili----------- 139 (267)
T cd05066 77 ----SKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILV----------- 139 (267)
T ss_pred ----CCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEE-----------
Confidence 36899999999 788988886533 3578899999999999999999996 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+.+..++|+|||.+.....
T Consensus 140 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 140 -------------------------------------------------------------NSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred -------------------------------------------------------------CCCCeEEeCCCCccccccc
Confidence 3356799999999865433
Q ss_pred ccc------cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 269 QFA------EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 269 ~~~------~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
... ...++..|+|||.+.+..++.++|+|||||++|++++ |..||...+. ......+.+ ..
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~------~~~~~~~~~---~~--- 226 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN------QDVIKAIEE---GY--- 226 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH------HHHHHHHhC---CC---
Confidence 211 1122457999999998889999999999999999886 9999965421 111111100 00
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
+...+...+..+.+++.+||+.+|.+|||+.++++
T Consensus 227 -----------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 227 -----------------------------------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred -----------------------------------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 00112234568889999999999999999999874
No 355
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.3e-33 Score=274.80 Aligned_cols=247 Identities=19% Similarity=0.329 Sum_probs=190.3
Q ss_pred CCceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.++|++.++||.|+||.||+|.+. .++..||+|++.... .....+.+|+++++.+ +|++|+++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l------~h~~iv~~~~~~ 77 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF------DHPNIVKLLGVC 77 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc------CCCchheEEEEE
Confidence 367999999999999999999864 367899999876432 3345688899999999 789999999987
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc--------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR--------------------YKGLELNKVREICKYILTGLDYLHRELGII 166 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~--------------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIi 166 (447)
.. +...+++|||+ +++|..++.... ...+++..+..++.|++.||+|||++ +++
T Consensus 78 ~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i~ 152 (288)
T cd05050 78 AV----GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KFV 152 (288)
T ss_pred cC----CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-Cee
Confidence 74 36789999999 789988875321 12367788899999999999999997 999
Q ss_pred cccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCc
Q 013220 167 HTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPER 246 (447)
Q Consensus 167 H~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (447)
||||||+||++
T Consensus 153 H~dl~p~nil~--------------------------------------------------------------------- 163 (288)
T cd05050 153 HRDLATRNCLV--------------------------------------------------------------------- 163 (288)
T ss_pred cccccHhheEe---------------------------------------------------------------------
Confidence 99999999999
Q ss_pred cCCCcccceeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCC
Q 013220 247 CLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQG 320 (447)
Q Consensus 247 ~~~~~~~~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~ 320 (447)
+....++|+|||.+...... ......+..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+
T Consensus 164 ---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~--- 237 (288)
T cd05050 164 ---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA--- 237 (288)
T ss_pred ---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---
Confidence 33567999999998644322 112234567999999998889999999999999999997 888886542
Q ss_pred CCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCC
Q 013220 321 FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTP 400 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP 400 (447)
...... .+... .....+...+..+.+||.+||+.||
T Consensus 238 ---~~~~~~---~~~~~--------------------------------------~~~~~~~~~~~~l~~li~~~l~~~p 273 (288)
T cd05050 238 ---HEEVIY---YVRDG--------------------------------------NVLSCPDNCPLELYNLMRLCWSKLP 273 (288)
T ss_pred ---HHHHHH---HHhcC--------------------------------------CCCCCCCCCCHHHHHHHHHHcccCc
Confidence 111111 00000 0001223346689999999999999
Q ss_pred CCCCChHHHhc
Q 013220 401 EKRPTAQQCLQ 411 (447)
Q Consensus 401 ~kRpta~elL~ 411 (447)
++|||+.|+++
T Consensus 274 ~~Rpt~~el~~ 284 (288)
T cd05050 274 SDRPSFASINR 284 (288)
T ss_pred ccCCCHHHHHH
Confidence 99999999874
No 356
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=4.1e-35 Score=264.08 Aligned_cols=285 Identities=22% Similarity=0.410 Sum_probs=216.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
++|++.+++|.|.++.||-|....+++.++||+++.... ..+.+|+.+|+.|. +++||+++++...+. ...
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk--kKIkREikIL~nL~-----gg~NIi~L~DiV~Dp--~Sk 108 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK--KKIKREIKILQNLR-----GGPNIIKLLDIVKDP--ESK 108 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH--HHHHHHHHHHHhcc-----CCCCeeehhhhhcCc--ccc
Confidence 579999999999999999999999999999999987654 67899999999996 799999999998876 456
Q ss_pred eEEEEEeccc-ccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFLG-DSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~~-~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
...+++||+. .++..++ ..++...++.++++++.||.|||+ +||.|||+||.|+|+.+.
T Consensus 109 tpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~-------------- 168 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHE-------------- 168 (338)
T ss_pred CchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechh--------------
Confidence 7889999994 4554444 336777899999999999999999 599999999999999542
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--cccc
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAE 272 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--~~~~ 272 (447)
.-.++|+|||+|-.... .-.-
T Consensus 169 ---------------------------------------------------------~rkLrlIDWGLAEFYHp~~eYnV 191 (338)
T KOG0668|consen 169 ---------------------------------------------------------LRKLRLIDWGLAEFYHPGKEYNV 191 (338)
T ss_pred ---------------------------------------------------------hceeeeeecchHhhcCCCceeee
Confidence 34689999999954432 2233
Q ss_pred CCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH-hh-hCCCCc
Q 013220 273 EIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK-IA-IGGAQS 349 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~-~~~~~~ 349 (447)
++-+.+|--||.+.... |+..-|+|||||+++.|+..+-||.... .+.+++-.+.+++|+..-. ++ +-....
T Consensus 192 RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~-----dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 192 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH-----DNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCC-----CCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 46788999999998754 7889999999999999999999987553 5778888888888875422 11 111111
Q ss_pred cchhcc-cchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 350 KDYFDR-HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 350 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.+-|+. -++-.+. .+...+.... -.-.++++.|||.++|..|..+|+||+|++.||||....
T Consensus 267 dp~~~~i~~~~~rk------~w~~Fi~~~n--~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 267 DPQFEDILGRHSRK------PWSRFINSEN--QHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred ChhHhhHhhccccc------cHHHhCCccc--cccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 111111 0010011 1222211111 112356889999999999999999999999999998754
No 357
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.4e-34 Score=275.71 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=180.2
Q ss_pred eecccCceEEEEEEeCC------------------------CCeEEEEEEechhHH-hHHHHHHHHHHHHHhhcCCCCCc
Q 013220 43 KLGWGQFSIVWLAYDTR------------------------TSSYVALKIQKSAAQ-FAQAALHEIEVLSAVADGDPSNE 97 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~------------------------~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~ 97 (447)
+||+|+||.||+|.... ....|++|++..... ....+.+|+.+++.+ +|
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l------~h 75 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV------SH 75 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC------CC
Confidence 68999999999996421 124688998765432 345677888888888 89
Q ss_pred ceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeE
Q 013220 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nil 176 (447)
+||+++++++... ...++||||+ +++|...+... ...+++..+..++.|++.||+|||++ ||+||||||+||+
T Consensus 76 ~niv~~~~~~~~~----~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Nil 149 (274)
T cd05076 76 IHLAFVHGVCVRG----SENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNIL 149 (274)
T ss_pred CCeeeEEEEEEeC----CceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccEE
Confidence 9999999988753 5789999999 77787776542 24588999999999999999999997 9999999999999
Q ss_pred eeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccccee
Q 013220 177 LVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCK 256 (447)
Q Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 256 (447)
+...... +.....++
T Consensus 150 l~~~~~~-----------------------------------------------------------------~~~~~~~k 164 (274)
T cd05076 150 LARLGLA-----------------------------------------------------------------EGTSPFIK 164 (274)
T ss_pred EeccCcc-----------------------------------------------------------------cCccceee
Confidence 9542100 01123589
Q ss_pred EeecCcccccccccccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHh-hCCCCCCCCCCCCCCCchHHHHHHHHH
Q 013220 257 VVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMEL 334 (447)
Q Consensus 257 L~Dfg~a~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~-~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 334 (447)
++|||.+..... .....++..|+|||.+.+ ..++.++|+|||||++|+++ +|..||...... .......
T Consensus 165 l~d~g~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~- 235 (274)
T cd05076 165 LSDPGVSFTALS-REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS-------EKERFYE- 235 (274)
T ss_pred ecCCcccccccc-ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH-------HHHHHHH-
Confidence 999998754322 223467888999999876 45789999999999999984 789998654211 1011100
Q ss_pred hCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 335 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.....+......+.++|.+||+.+|++|||++++|++
T Consensus 236 -----------------------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 236 -----------------------------------------KKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred -----------------------------------------hccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 0111222234578899999999999999999999975
No 358
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=9.2e-34 Score=300.20 Aligned_cols=278 Identities=19% Similarity=0.236 Sum_probs=177.6
Q ss_pred CCceEEEEeecccCceEEEEEEeCCC----CeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRT----SSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
.++|.+.++||+|+||.||+|++..+ +..||+|.+..... .|..+...+.+. .+.+++.++..|...
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~---~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRA---CPNSCADFVYGFLEP 201 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhh---chhhHHHHHHhhhcc
Confidence 36899999999999999999999888 89999997654321 122222222111 111222222222211
Q ss_pred --CCCcceEEEEEecc-cccHHHHHHhhccC------------------CCCHHHHHHHHHHHHHHHHHHHhhCCccccc
Q 013220 111 --GPNGQHLCMVLEFL-GDSLLRLIKYSRYK------------------GLELNKVREICKYILTGLDYLHRELGIIHTD 169 (447)
Q Consensus 111 --~~~~~~~~lvmE~~-~~~L~~~~~~~~~~------------------~l~~~~~~~i~~qil~aL~~lH~~~gIiH~D 169 (447)
...+...++||||+ +++|.+++...... ......+..++.|++.||+|||++ ||+|||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRD 280 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRD 280 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCc
Confidence 12456899999999 77888877543210 012334668999999999999996 999999
Q ss_pred CCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCC
Q 013220 170 LKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD 249 (447)
Q Consensus 170 ikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (447)
|||+|||+..
T Consensus 281 LKP~NILl~~---------------------------------------------------------------------- 290 (566)
T PLN03225 281 VKPQNIIFSE---------------------------------------------------------------------- 290 (566)
T ss_pred CCHHHEEEeC----------------------------------------------------------------------
Confidence 9999999942
Q ss_pred CcccceeEeecCccccccc----ccccCCCCCCccChHHhhcCC----------------------CCccchhHhHHHHH
Q 013220 250 GIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRAG----------------------YSFSVDMWSFACTA 303 (447)
Q Consensus 250 ~~~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~l~~~~----------------------~~~~~DiwSlGvil 303 (447)
....+||+|||++..... .....++++.|+|||.+.... ++.++|||||||++
T Consensus 291 -~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL 369 (566)
T PLN03225 291 -GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIF 369 (566)
T ss_pred -CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHH
Confidence 235799999999964432 234457899999999764322 33467999999999
Q ss_pred HHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChh
Q 013220 304 FELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET 383 (447)
Q Consensus 304 ~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (447)
|+|+++..|+.. .......++...+.....|....... ...-+.........
T Consensus 370 ~el~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~d~ 421 (566)
T PLN03225 370 LQMAFPNLRSDS--------NLIQFNRQLKRNDYDLVAWRKLVEPR--------------------ASPDLRRGFEVLDL 421 (566)
T ss_pred HHHHhCcCCCch--------HHHHHHHHHHhcCCcHHHHHHhhccc--------------------cchhhhhhhhhccc
Confidence 999987665421 22222222222222222221000000 00000000011111
Q ss_pred hHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 384 DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 384 ~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
......+||.+||+.||++|||++|+|+||||+.....
T Consensus 422 ~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 422 DGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred cchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 23456699999999999999999999999999876543
No 359
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.8e-33 Score=272.65 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=191.3
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCCCe----EEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSS----YVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
+..++|++.+.||+|+||+||+|.+..++. .+|+|...... .....+.+|+++++.+ .|+||+++++.
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~ 77 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV------DHPHVVRLLGI 77 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC------CCCCcceEEEE
Confidence 345789999999999999999998766544 68999876543 3346788899999998 78999999998
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
+.. ...++||||+ +++|.+.+.... ..+++..+..++.|++.||+|||+. ||+|+||||+||++
T Consensus 78 ~~~-----~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~-------- 142 (279)
T cd05057 78 CLS-----SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLV-------- 142 (279)
T ss_pred Eec-----CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEE--------
Confidence 764 4789999999 889998876533 3488999999999999999999996 99999999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
+....++|+|||.+..
T Consensus 143 ----------------------------------------------------------------~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 143 ----------------------------------------------------------------KTPQHVKITDFGLAKL 158 (279)
T ss_pred ----------------------------------------------------------------cCCCeEEECCCccccc
Confidence 3355799999999865
Q ss_pred ccccccc-----CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 266 ANKQFAE-----EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 266 ~~~~~~~-----~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
....... ..++..|+|||.+....++.++|+|||||++|++++ |..||.... ...+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-------~~~~~~~~~~~~--- 228 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-------AVEIPDLLEKGE--- 228 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-------HHHHHHHHhCCC---
Confidence 4322111 123567999999988889999999999999999998 999996542 111111111000
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+++.+||..||.+|||+.++++
T Consensus 229 -------------------------------------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 229 -------------------------------------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred -------------------------------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 01122233457889999999999999999998864
No 360
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.2e-33 Score=275.43 Aligned_cols=245 Identities=24% Similarity=0.357 Sum_probs=187.9
Q ss_pred ceEEEEeecccCceEEEEEEeCC-----CCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTR-----TSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
+|++.+.||+|+||.||+|++.. ....+++|.+.... .....+.+|+++++.+ .|+||+++++.+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~ 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV------NHPHVIKLYGACSQ 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC------CCCCEeeEEEEEec
Confidence 48899999999999999998643 23578999776432 2345788899999998 78999999998875
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhc----------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSR----------------------YKGLELNKVREICKYILTGLDYLHRELGII 166 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~----------------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIi 166 (447)
. ...+++|||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+
T Consensus 75 ~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~iv 149 (290)
T cd05045 75 D----GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLV 149 (290)
T ss_pred C----CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-Cee
Confidence 3 5789999999 788988875421 12367888999999999999999996 999
Q ss_pred cccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCc
Q 013220 167 HTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPER 246 (447)
Q Consensus 167 H~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (447)
||||||+||++.
T Consensus 150 H~dikp~nill~-------------------------------------------------------------------- 161 (290)
T cd05045 150 HRDLAARNVLVA-------------------------------------------------------------------- 161 (290)
T ss_pred hhhhhhheEEEc--------------------------------------------------------------------
Confidence 999999999993
Q ss_pred cCCCcccceeEeecCccccccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCC
Q 013220 247 CLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQG 320 (447)
Q Consensus 247 ~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~ 320 (447)
....++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+..
T Consensus 162 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--- 234 (290)
T cd05045 162 ----EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--- 234 (290)
T ss_pred ----CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC---
Confidence 35679999999986432211 12234678999999988889999999999999999998 999996542
Q ss_pred CCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCC
Q 013220 321 FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTP 400 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP 400 (447)
...+ .+..... .....+...+.++.+|+.+||+.+|
T Consensus 235 ----~~~~---~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~i~~cl~~~P 270 (290)
T cd05045 235 ----PERL---FNLLKTG-------------------------------------YRMERPENCSEEMYNLMLTCWKQEP 270 (290)
T ss_pred ----HHHH---HHHHhCC-------------------------------------CCCCCCCCCCHHHHHHHHHHccCCc
Confidence 1111 1110000 0011223446689999999999999
Q ss_pred CCCCChHHHhc
Q 013220 401 EKRPTAQQCLQ 411 (447)
Q Consensus 401 ~kRpta~elL~ 411 (447)
++||+++++++
T Consensus 271 ~~Rp~~~~i~~ 281 (290)
T cd05045 271 DKRPTFADISK 281 (290)
T ss_pred ccCCCHHHHHH
Confidence 99999999974
No 361
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.7e-33 Score=287.34 Aligned_cols=249 Identities=20% Similarity=0.306 Sum_probs=190.8
Q ss_pred CceEEEEeecccCceEEEEEEeC-----CCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDT-----RTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
++|.+.++||+|+||.||+|++. .++..||+|+++.. ....+.+.+|++++..+. .|+||+++++++.
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-----~H~niv~~~~~~~ 111 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-----PHLNIVNLLGACT 111 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-----CCCCeEEEEEEEc
Confidence 56889999999999999999853 35678999988754 223456888999999983 4999999999987
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhcc--------------------------------------------------
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRY-------------------------------------------------- 137 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~-------------------------------------------------- 137 (447)
.. ...++||||| +++|.+++.....
T Consensus 112 ~~----~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 112 KG----GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred cC----CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 53 5799999999 8899988854311
Q ss_pred ----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCC
Q 013220 138 ----------------------------------------------KGLELNKVREICKYILTGLDYLHRELGIIHTDLK 171 (447)
Q Consensus 138 ----------------------------------------------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dik 171 (447)
..++...+..++.|++.||+|||+. +|+|||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrdlk 266 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHRDLA 266 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcccCC
Confidence 1255667788999999999999996 99999999
Q ss_pred CCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCc
Q 013220 172 PENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI 251 (447)
Q Consensus 172 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (447)
|+||++. .
T Consensus 267 p~NiLl~------------------------------------------------------------------------~ 274 (401)
T cd05107 267 ARNVLIC------------------------------------------------------------------------E 274 (401)
T ss_pred cceEEEe------------------------------------------------------------------------C
Confidence 9999993 3
Q ss_pred ccceeEeecCcccccccc-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCch
Q 013220 252 DMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDE 325 (447)
Q Consensus 252 ~~~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~ 325 (447)
...++|+|||++...... .....++..|+|||.+.+..++.++|+|||||++|+|++ |..||..... .
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~------~ 348 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM------N 348 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc------h
Confidence 457999999998653221 122356788999999988889999999999999999998 8899865421 1
Q ss_pred HHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC
Q 013220 326 DHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT 405 (447)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt 405 (447)
........ +. .....+...+.++.+||.+||+.+|++||+
T Consensus 349 ~~~~~~~~--~~--------------------------------------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs 388 (401)
T cd05107 349 EQFYNAIK--RG--------------------------------------YRMAKPAHASDEIYEIMQKCWEEKFEIRPD 388 (401)
T ss_pred HHHHHHHH--cC--------------------------------------CCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 11000000 00 001123344678999999999999999999
Q ss_pred hHHHhcC
Q 013220 406 AQQCLQH 412 (447)
Q Consensus 406 a~elL~h 412 (447)
++++++.
T Consensus 389 ~~ell~~ 395 (401)
T cd05107 389 FSQLVHL 395 (401)
T ss_pred HHHHHHH
Confidence 9999864
No 362
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-33 Score=276.72 Aligned_cols=249 Identities=18% Similarity=0.279 Sum_probs=191.0
Q ss_pred cccCCceEEEEeecccCceEEEEEEeCCCCe----EEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecc
Q 013220 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSS----YVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLID 105 (447)
Q Consensus 32 ~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~ 105 (447)
++..++|+..+.||+|+||.||+|.+..++. .||+|.+.... .....+.+|+.+++.+ +|+||+++++
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l------~h~niv~~~~ 76 (303)
T cd05110 3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM------DHPHLVRLLG 76 (303)
T ss_pred ccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCcccEEE
Confidence 4556789999999999999999998876665 57888776432 2234678899999988 7899999999
Q ss_pred cccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 106 HFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 106 ~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
.+... ..+++|||+ +++|.+.+.... ..+++..+..++.|++.||+|||++ ||+|+||||+||++.
T Consensus 77 ~~~~~-----~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~------ 143 (303)
T cd05110 77 VCLSP-----TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVK------ 143 (303)
T ss_pred EEcCC-----CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc-Ceeccccccceeeec------
Confidence 87642 467899999 788988876432 3578889999999999999999996 999999999999993
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
....+||+|||.+.
T Consensus 144 ------------------------------------------------------------------~~~~~kL~Dfg~~~ 157 (303)
T cd05110 144 ------------------------------------------------------------------SPNHVKITDFGLAR 157 (303)
T ss_pred ------------------------------------------------------------------CCCceEEccccccc
Confidence 34569999999997
Q ss_pred cccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 265 RANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 265 ~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
...... ....++..|+|||.+.+..++.++|||||||++|++++ |..||.+.. ......+.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~~- 229 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-------TREIPDLLEKGER- 229 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHCCCC-
Confidence 543221 12234678999999988889999999999999999997 889986542 1111111110000
Q ss_pred CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
...+...+..+.+++.+||..+|++||+++++++.
T Consensus 230 ---------------------------------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 230 ---------------------------------------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred ---------------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00112234578899999999999999999998874
No 363
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.4e-34 Score=275.67 Aligned_cols=245 Identities=19% Similarity=0.315 Sum_probs=182.4
Q ss_pred EeecccCceEEEEEEeCCCC-------eEEEEEEechhH-HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 42 RKLGWGQFSIVWLAYDTRTS-------SYVALKIQKSAA-QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~-------~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+.||.|+||+||+|.+...+ ..+++|...... ...+.+.+|..+++.+ .|+||+++++.+...
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~------~h~~iv~~~~~~~~~--- 71 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL------SHKHLVLNYGVCVCG--- 71 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC------CCCChhheeeEEEeC---
Confidence 46899999999999875543 348888765443 3345778899999888 889999999998753
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
...++||||+ +++|..++.... ..+++..++.++.||+.||+|||++ ||+||||||+||++.......
T Consensus 72 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~-------- 140 (258)
T cd05078 72 -DESIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRK-------- 140 (258)
T ss_pred -CCcEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccc--------
Confidence 5789999999 788988876433 3578899999999999999999996 999999999999995421100
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccccc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAE 272 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 272 (447)
......++++|||.+..... ...
T Consensus 141 --------------------------------------------------------~~~~~~~~l~d~g~~~~~~~-~~~ 163 (258)
T cd05078 141 --------------------------------------------------------TGNPPFIKLSDPGISITVLP-KEI 163 (258)
T ss_pred --------------------------------------------------------cCCCceEEecccccccccCC-chh
Confidence 01123479999998864432 223
Q ss_pred CCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCC-CCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 273 EIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 273 ~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~-~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
..++..|+|||.+.+. .++.++|||||||++|+|++|. .||...+ .. .....
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~------~~-~~~~~------------------- 217 (258)
T cd05078 164 LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD------SQ-KKLQF------------------- 217 (258)
T ss_pred ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc------HH-HHHHH-------------------
Confidence 4678899999999874 5789999999999999999984 5554321 00 00000
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
......++.....++.+||.+||+.||++|||++++++.
T Consensus 218 -----------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 218 -----------------------YEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -----------------------HHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 011112333345678899999999999999999999864
No 364
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=5.6e-35 Score=283.88 Aligned_cols=341 Identities=23% Similarity=0.331 Sum_probs=220.3
Q ss_pred CceEEEEeecccCceEEEEEEeCC---CCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTR---TSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
..|.++++||+|+|++||+|.+.. ..+.||+|.+..... ...+.+|+++|..+. ++.||+++.+++..
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~g-----G~~ni~~~~~~~rn--- 106 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLG-----GSDNIIKLNGCFRN--- 106 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhc-----cchhhhcchhhhcc---
Confidence 569999999999999999998776 789999997665543 456899999999997 78899999999884
Q ss_pred CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 113 NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 113 ~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
++..++||||++++-+..+. ..++...++.+++.++.||+++|.+ |||||||||.|++++.. +.....++.|+
T Consensus 107 -nd~v~ivlp~~~H~~f~~l~----~~l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~-t~rg~LvDFgL 179 (418)
T KOG1167|consen 107 -NDQVAIVLPYFEHDRFRDLY----RSLSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRR-TQRGVLVDFGL 179 (418)
T ss_pred -CCeeEEEecccCccCHHHHH----hcCCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccc-cCCceEEechh
Confidence 48999999999665444333 2377889999999999999999997 99999999999999653 34445555555
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhh--hhhhcc-cCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANI--SIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
..+... .++...+-. .....+ +|.....+..-....-.+.++-+ .......
T Consensus 180 A~~~d~----------------------~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~----~~~r~~~ 233 (418)
T KOG1167|consen 180 AQRYDG----------------------YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRC----NDGRPSE 233 (418)
T ss_pred HHHHHh----------------------hhhhhhhhhhhcccCCccccCcccccccccccCCCCceecc----CCCccce
Confidence 432000 000000000 000000 11111111111000000000000 0000112
Q ss_pred cccCCCCCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH-hhhCCC
Q 013220 270 FAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK-IAIGGA 347 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 347 (447)
.....||+.|+|||++.+.+ .++++||||.|||++.++++.+||.... .+...+..+..++|...-. ......
T Consensus 234 ~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~-----dd~~al~ei~tifG~~~mrk~A~l~g 308 (418)
T KOG1167|consen 234 RANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAK-----DDADALAEIATIFGSAEMRKCAALPG 308 (418)
T ss_pred ecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCc-----cccchHHHHHHHhChHHHHHHhhcCC
Confidence 23457999999999999875 5899999999999999999999998775 5777788888888876633 222222
Q ss_pred Cccchhccc--chhhhhhhcccCch--------hHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 348 QSKDYFDRH--GDLKRIRRLKFWSL--------DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 348 ~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
+ .-+|+.. ..+... ...+..+ ++............+..+.+||.+||+.||.+|+||+++|.||||.+
T Consensus 309 ~-~~l~~ksn~~~~~e~-~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 309 R-ILLWQKSNIPTIPEL-RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred c-eeeeccccccccHHH-HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 2 1112110 000000 0011111 11001111222334558899999999999999999999999999997
Q ss_pred ccCCcccc
Q 013220 418 RNSTRDET 425 (447)
Q Consensus 418 ~~~~~~~~ 425 (447)
.+......
T Consensus 387 ~~~~~~~~ 394 (418)
T KOG1167|consen 387 ADRTERGL 394 (418)
T ss_pred hhhhhhhh
Confidence 65544433
No 365
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=272.63 Aligned_cols=291 Identities=30% Similarity=0.467 Sum_probs=225.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
.||.-...+|.|.- .|-.|-|.-.++.||+|..... ....+...+|+.++..+ .|+||++++.+|.-..-
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v------~~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV------NHKNIISLLNVFTPQKT 89 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh------cccceeeeeeccCcccc
Confidence 68988999999998 8888888888999999954322 22345677899999999 89999999999874321
Q ss_pred --CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 113 --NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 113 --~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
....+|+|||+|..++..++.- .++.+++..+++|++.|+++||+. ||+|||+||+||++
T Consensus 90 l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv------------- 151 (369)
T KOG0665|consen 90 LEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVV------------- 151 (369)
T ss_pred HHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhc-ceeecccCccccee-------------
Confidence 2246999999999999888762 278889999999999999999996 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc--
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-- 268 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~-- 268 (447)
...+.+|+.|||+|.....
T Consensus 152 -----------------------------------------------------------~~~~~lKi~dfg~ar~e~~~~ 172 (369)
T KOG0665|consen 152 -----------------------------------------------------------NSDCTLKILDFGLARTEDTDF 172 (369)
T ss_pred -----------------------------------------------------------cchhheeeccchhhcccCccc
Confidence 4477899999999976553
Q ss_pred ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 269 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 269 ~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.-+.++.+.+|+|||++.+-.|...+||||+||++.+|+.|...|.+. ...++...+.+.+|++-+.+......
T Consensus 173 ~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~------d~idQ~~ki~~~lgtpd~~F~~qL~~ 246 (369)
T KOG0665|consen 173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK------DHIDQWNKIIEQLGTPDPSFMKQLQP 246 (369)
T ss_pred ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc------hHHHHHHHHHHHhcCCCHHHHHHhhH
Confidence 346678999999999999988999999999999999999999999977 47888889999999998887544333
Q ss_pred ccchhcccchhhhhhhcccC-ch-hHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFW-SL-DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
....|-+. ...+-..++. .+ +..+......++..+..+++++.+||..||++|.+++++|+||||+.+
T Consensus 247 ~~r~yv~~--~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw 316 (369)
T KOG0665|consen 247 TVRNYVEN--RPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW 316 (369)
T ss_pred HHHHHhhc--ChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence 33222221 1111111111 01 111111222333446778999999999999999999999999999843
No 366
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.5e-33 Score=265.77 Aligned_cols=238 Identities=23% Similarity=0.390 Sum_probs=185.5
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
++||.|+||.||+|.+.. ++.||+|.+.... .....+..|+++++.+ .|++|+++++.+... ...++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~----~~~~~ 69 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY------DHPNIVKLIGVCVQK----QPIYI 69 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCeEEEEEEEecC----CCeEE
Confidence 468999999999999877 9999999876543 2456788899999998 788999999987753 68999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|.+.+.... ..+++..+..++.+++.||+|||++ +++||||||+||++
T Consensus 70 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili--------------------- 126 (251)
T cd05041 70 VMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLV--------------------- 126 (251)
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEE---------------------
Confidence 99999 788888875432 3578889999999999999999997 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-----cC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EE 273 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~-----~~ 273 (447)
+....++|+|||.+........ ..
T Consensus 127 ---------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 127 ---------------------------------------------------GENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred ---------------------------------------------------cCCCcEEEeeccccccccCCcceeccccC
Confidence 3356799999999875432111 11
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccch
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY 352 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 352 (447)
..+..|+|||.+.+..++.++|+|||||++|+|++ |..||.... .. ........ .
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~------~~-~~~~~~~~--~--------------- 211 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS------NQ-QTRERIES--G--------------- 211 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC------HH-HHHHHHhc--C---------------
Confidence 23556999999988889999999999999999998 888886542 11 11111000 0
Q ss_pred hcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 353 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.+++.+||..+|.+|||+.|+++
T Consensus 212 -----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 212 -----------------------YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -----------------------CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 001123344668999999999999999999999985
No 367
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4e-33 Score=265.25 Aligned_cols=238 Identities=21% Similarity=0.351 Sum_probs=183.9
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
+.||+|+||.||+|... .+..+|+|++.... .....+.+|+++++.+ .|+||+++++.+... ...++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~----~~~~l 69 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQY------DHPNIVKLIGVCTQR----QPIYI 69 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC------CCCCcCeEEEEEecC----CccEE
Confidence 36899999999999854 67889999876432 2344678899999998 789999999988743 57999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCC
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILER 198 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~ 198 (447)
||||+ +++|.+.+.... ..+++..+..++.|++.||.|+|++ |++|+||||+||++
T Consensus 70 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili--------------------- 126 (250)
T cd05085 70 VMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLV--------------------- 126 (250)
T ss_pred EEECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEE---------------------
Confidence 99999 888888775432 3478899999999999999999996 99999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc----cCC
Q 013220 199 PEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA----EEI 274 (447)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~----~~~ 274 (447)
+....++|+|||++........ ...
T Consensus 127 ---------------------------------------------------~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 127 ---------------------------------------------------GENNVLKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred ---------------------------------------------------cCCCeEEECCCccceeccccccccCCCCC
Confidence 3356799999999864432211 113
Q ss_pred CCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchh
Q 013220 275 QTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 353 (447)
Q Consensus 275 gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 353 (447)
++..|+|||++.+..++.++|+|||||++|++++ |..||.... ...... .+....
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~------~~~~~~---~~~~~~--------------- 211 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT------NQQARE---QVEKGY--------------- 211 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC------HHHHHH---HHHcCC---------------
Confidence 3567999999988888999999999999999998 999996542 111111 100000
Q ss_pred cccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 354 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
....+...+..+.+|+.+||..+|++|||+.++++
T Consensus 212 -----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 212 -----------------------RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred -----------------------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 00122334668999999999999999999999975
No 368
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=289.35 Aligned_cols=252 Identities=27% Similarity=0.397 Sum_probs=212.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
.+++.+.-||-|+||.|-+.........+|+|++++.. ...+++..|-++|... ..+.||++|..|.+.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~------~s~fIvrLYrTfrd~- 492 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC------RSDFIVRLYRTFRDS- 492 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc------CchHHHHHHHHhccc-
Confidence 45677788999999999999877666679999888764 3456888999999998 788999999999865
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
.++|++||-| ||.+...+... ..|++.+++.++..+++|++|||++ |||.||+||+|.++
T Consensus 493 ---kyvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllL------------- 553 (732)
T KOG0614|consen 493 ---KYVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLL------------- 553 (732)
T ss_pred ---hhhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheee-------------
Confidence 7999999999 99999988654 4599999999999999999999997 99999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
+..+.+||.|||+|+.+....
T Consensus 554 -----------------------------------------------------------d~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 554 -----------------------------------------------------------DNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred -----------------------------------------------------------ccCCceEEeehhhHHHhccCC
Confidence 667899999999999776543
Q ss_pred c--cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 A--EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 ~--~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
. .+|||+.|.|||++..+..+.++|.||||+++|+|++|..||.+.+ .......+.+-+
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d------pmktYn~ILkGi------------- 635 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD------PMKTYNLILKGI------------- 635 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc------hHHHHHHHHhhh-------------
Confidence 3 3699999999999999999999999999999999999999998774 222222222111
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLR 418 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~ 418 (447)
+...+|+.++....+||++++..+|.+|.- +.++-+|.||..-
T Consensus 636 ---------------------------d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 636 ---------------------------DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred ---------------------------hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 122467788889999999999999999985 8999999999754
No 369
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.7e-33 Score=268.97 Aligned_cols=244 Identities=23% Similarity=0.307 Sum_probs=178.4
Q ss_pred EeecccCceEEEEEEeC--CCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDT--RTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+.||+|+||.||+|... .+...+|+|.++... .....+.+|+.+++.+ +|+||+++++.+... ...
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~----~~~ 70 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL------QHSNLLQCLGQCTEV----TPY 70 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC------CCCCEeeEEEEEcCC----CCc
Confidence 36899999999999754 456789999876543 2334688899999999 789999999988754 578
Q ss_pred EEEEecc-cccHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 118 CMVLEFL-GDSLLRLIKYSRY---KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~---~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
++||||+ +++|.+.+..... ...+...+..++.|++.||+|||+. |++|+||||+||++.
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~--------------- 134 (269)
T cd05087 71 LLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLT--------------- 134 (269)
T ss_pred EEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEc---------------
Confidence 9999999 7899888754321 2356677888999999999999996 999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc----
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---- 269 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---- 269 (447)
....++|+|||.+......
T Consensus 135 ---------------------------------------------------------~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 135 ---------------------------------------------------------ADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred ---------------------------------------------------------CCCcEEECCccccccccCcceee
Confidence 3567999999998643321
Q ss_pred -cccCCCCCCccChHHhhcC-------CCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 270 -FAEEIQTRQYRAPEVILRA-------GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~-------~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
.....++..|+|||++.+. .++.++|||||||++|+|++ |..||.... ........ ..+....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~------~~~~~~~~--~~~~~~~ 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLS------DEQVLTYT--VREQQLK 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCC------hHHHHHHH--hhcccCC
Confidence 1123567889999998642 35789999999999999996 999996542 11111110 0000000
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
+ ..+......++.+.+++.+|+ .+|++|||+++++.
T Consensus 230 -~---------------------------------~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 230 -L---------------------------------PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred -C---------------------------------CCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 0 000111223557889999998 68999999999974
No 370
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3e-33 Score=269.03 Aligned_cols=244 Identities=25% Similarity=0.371 Sum_probs=184.9
Q ss_pred eecccCceEEEEEEeCCCC------eEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 43 KLGWGQFSIVWLAYDTRTS------SYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~~~------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.||.|+||.||+|++.... ..+|+|.+.... .....+.+|+++++.+ .|+||+++++++...
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~---- 71 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF------NHPNIVKLLGVCLLN---- 71 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc------CCCCeeeEeeeecCC----
Confidence 6899999999999875433 789999765432 3345778899999999 889999999988753
Q ss_pred ceEEEEEecc-cccHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSR-----YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~-----~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
...++||||+ +++|.+.+.... ...+++..+..++.|++.||+|||++ +++|+||||+||++.....
T Consensus 72 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~------ 144 (269)
T cd05044 72 EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGY------ 144 (269)
T ss_pred CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCC------
Confidence 5799999999 889988885432 12377888999999999999999996 9999999999999954210
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK 268 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~ 268 (447)
+....++|+|||++.....
T Consensus 145 -------------------------------------------------------------~~~~~~~l~dfg~~~~~~~ 163 (269)
T cd05044 145 -------------------------------------------------------------DADRVVKIGDFGLARDIYK 163 (269)
T ss_pred -------------------------------------------------------------CCCcceEECCccccccccc
Confidence 1233689999999865432
Q ss_pred c-----cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 269 Q-----FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 269 ~-----~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
. .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.... .......+ .. +
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~------~~~~~~~~-~~-~------ 229 (269)
T cd05044 164 SDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN------NQEVLQHV-TA-G------ 229 (269)
T ss_pred ccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC------HHHHHHHH-hc-C------
Confidence 1 112245678999999998889999999999999999998 999996442 11111110 00 0
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.....+...+..+.+||.+||..+|.+||+++++++
T Consensus 230 ---------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 230 ---------------------------------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ---------------------------------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 011123345678899999999999999999999875
No 371
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=292.49 Aligned_cols=206 Identities=29% Similarity=0.432 Sum_probs=175.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC-
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP- 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~- 112 (447)
+-+...+.||+|+||.||+|+++.+|+.||||.++.. ....+.+.+|+++|+++ +|+|||+++++=.....
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL------nh~NIVk~f~iee~~~~~ 86 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL------NHPNIVKLFDIEETKFLG 86 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc------CchhhhhhcccCCccccC
Confidence 5678889999999999999999999999999987764 34567889999999999 89999999998654421
Q ss_pred -CcceEEEEEecc-cccHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 113 -NGQHLCMVLEFL-GDSLLRLIKY-SRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 113 -~~~~~~lvmE~~-~~~L~~~~~~-~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
-...-.+||||| ||+|...+.. ...+++++.+++.+...+..||.|||++ ||+||||||.||++..-.
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Ge-------- 157 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGE-------- 157 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecC--------
Confidence 135688999999 9999998864 3456799999999999999999999997 999999999999994310
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK- 268 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~- 268 (447)
+.....||+|||.|+..++
T Consensus 158 ------------------------------------------------------------dgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 158 ------------------------------------------------------------DGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred ------------------------------------------------------------CCceEEeeecccccccCCCC
Confidence 2345679999999986653
Q ss_pred -ccccCCCCCCccChHHhhc-CCCCccchhHhHHHHHHHHhhCCCCCCCC
Q 013220 269 -QFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPK 316 (447)
Q Consensus 269 -~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~~l~~g~~Pf~~~ 316 (447)
.....+||..|.+||++.+ ..|+..+|.|||||++|+.+||..||...
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 4566789999999999995 78899999999999999999999999765
No 372
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.7e-33 Score=268.81 Aligned_cols=244 Identities=23% Similarity=0.320 Sum_probs=177.7
Q ss_pred EeecccCceEEEEEEeCC--CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 42 RKLGWGQFSIVWLAYDTR--TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
++||+|+||.||+|.... ....+++|.+... ......+.+|+++++.+ +|+||+++++.+... ...
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~nii~~~~~~~~~----~~~ 70 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL------NHPNVLQCLGQCIES----IPY 70 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC------CCCCcceEEEEECCC----Cce
Confidence 368999999999996432 4567888976533 23345677899999888 899999999988753 679
Q ss_pred EEEEecc-cccHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 118 CMVLEFL-GDSLLRLIKYSRY---KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~---~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
++||||+ +++|.+++..... ...++..+..++.||+.||+|||+. ||+||||||+||++
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill---------------- 133 (269)
T cd05042 71 LLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQL---------------- 133 (269)
T ss_pred EEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEe----------------
Confidence 9999999 8899988865431 2245777889999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc----
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---- 269 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---- 269 (447)
+....++|+|||++......
T Consensus 134 --------------------------------------------------------~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 134 --------------------------------------------------------TADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred --------------------------------------------------------cCCCcEEEeccccccccccchhee
Confidence 33567999999998543211
Q ss_pred -cccCCCCCCccChHHhhc-------CCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 270 -FAEEIQTRQYRAPEVILR-------AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~-------~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
.....++..|+|||++.. ..++.++|||||||++|+|++ |..||.... .......... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~---~~~~ 228 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS------DEQVLKQVVR---EQDI 228 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhh---ccCc
Confidence 122345678999999853 346789999999999999998 788886442 1111111111 1000
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.+ ..+..+...+..+.+++..|+ .||++|||++++++
T Consensus 229 ~~---------------------------------~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 229 KL---------------------------------PKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred cC---------------------------------CCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 00 001122344667788898888 59999999999975
No 373
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.4e-33 Score=264.86 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=179.5
Q ss_pred EeecccCceEEEEEEeCC---CCeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 42 RKLGWGQFSIVWLAYDTR---TSSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
+.||+|+||.||+|.+.. .+..||+|.+... ......+.+|+.+++.+ +|+||+++++.+... ...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~---~~~ 71 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF------SHPNVLSLLGICLPS---EGS 71 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC------CCCCcceEEEEeecC---CCC
Confidence 468999999999997643 3567999987532 23356778899999888 789999999976532 245
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
.+++|||+ +++|.+++.... ...+...+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 72 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~----------------- 132 (262)
T cd05058 72 PLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLD----------------- 132 (262)
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEc-----------------
Confidence 78999999 889998876432 3356777888999999999999996 999999999999993
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc------
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------ 269 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~------ 269 (447)
....++|+|||++......
T Consensus 133 -------------------------------------------------------~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 133 -------------------------------------------------------ESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred -------------------------------------------------------CCCcEEECCccccccccCCcceeec
Confidence 3567999999998644321
Q ss_pred -cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhC-CCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG-DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....++..|+|||.+.+..++.++|||||||++|+|++| ..||...+ ... ....+...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-------~~~--~~~~~~~~---------- 218 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-------SFD--ITVYLLQG---------- 218 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-------HHH--HHHHHhcC----------
Confidence 1122456789999999888899999999999999999995 55554321 111 11111000
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
..+..+...+..+.+++.+||+.+|++||++.+++..
T Consensus 219 ----------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 219 ----------------------------RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred ----------------------------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0011222345688899999999999999999999863
No 374
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-35 Score=269.00 Aligned_cols=291 Identities=23% Similarity=0.327 Sum_probs=217.7
Q ss_pred CCCCCCCCCccccCCCCCCCccccccC-c---cccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHH
Q 013220 4 SSSSGSEDDDEGIDSYRKGGYHAVRVG-D---LFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQ 77 (447)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-~---~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~ 77 (447)
|+..++..+.|.+.+|-.|. -+.++ + .+.....+-.+.||.|+||+|++-.++.+++..|||.+.... ....
T Consensus 30 ~~n~~~~~~~~~lr~~s~g~--l~~p~~~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~ 107 (361)
T KOG1006|consen 30 SSNEDNMPEEERLRSYSTGT--LKLPDDAHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQK 107 (361)
T ss_pred CCcccccchHHHHHHhccCc--eecCCcccccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHH
Confidence 33344444555565555551 11111 1 233345556678999999999999999999999999877553 4456
Q ss_pred HHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecccccHHHHHHh---hccCCCCHHHHHHHHHHHHH
Q 013220 78 AALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKY---SRYKGLELNKVREICKYILT 154 (447)
Q Consensus 78 ~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~---~~~~~l~~~~~~~i~~qil~ 154 (447)
.+..|.+...+-. +.++||++|++.... ...||.||.|..++..+++. -+...++|+-+..|.-..+.
T Consensus 108 rll~e~d~~mks~-----~cp~IVkfyGa~F~E----GdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~ 178 (361)
T KOG1006|consen 108 RLLMEHDTVMKSS-----NCPNIVKFYGALFSE----GDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVD 178 (361)
T ss_pred HHHHHHHHHHhhc-----CCcHHHHHhhhhhcC----CceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehh
Confidence 7888888776664 889999999987753 47899999998887766643 12345888888888888999
Q ss_pred HHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhc
Q 013220 155 GLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRA 234 (447)
Q Consensus 155 aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
||.||-.++.|||||+||.|||+
T Consensus 179 AL~yLK~~lkiIHRDvKPSNILl--------------------------------------------------------- 201 (361)
T KOG1006|consen 179 ALDYLKEELKIIHRDVKPSNILL--------------------------------------------------------- 201 (361)
T ss_pred HHHHHHHHhhhhhccCChhheEE---------------------------------------------------------
Confidence 99999988899999999999999
Q ss_pred ccCCCCCCCCCccCCCcccceeEeecCcccccccc--cccCCCCCCccChHHhhc--CCCCccchhHhHHHHHHHHhhCC
Q 013220 235 SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR--AGYSFSVDMWSFACTAFELATGD 310 (447)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~~l~~g~ 310 (447)
+..+.+||||||++-....+ .+...|..+|+|||.+.- ..|+.++|+||||++||++.+|.
T Consensus 202 ---------------dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~ 266 (361)
T KOG1006|consen 202 ---------------DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGN 266 (361)
T ss_pred ---------------ecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCC
Confidence 56788999999999655443 345678999999999973 45899999999999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHh-CCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHH
Q 013220 311 MLFAPKSGQGFCEDEDHLALMMELI-GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFA 389 (447)
Q Consensus 311 ~Pf~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 389 (447)
+||...+ ...+++-++. |.+|. +.... -.-+.+..+.
T Consensus 267 fPyr~w~--------svfeql~~Vv~gdpp~-l~~~~---------------------------------~~~~~s~~~~ 304 (361)
T KOG1006|consen 267 FPYRKWD--------SVFEQLCQVVIGDPPI-LLFDK---------------------------------ECVHYSFSMV 304 (361)
T ss_pred CCcchHH--------HHHHHHHHHHcCCCCe-ecCcc---------------------------------cccccCHHHH
Confidence 9998763 1333333332 33332 11000 0012466899
Q ss_pred HHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 390 EFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 390 ~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
.||.-||.+|-.+||+-.+++++||++.-.
T Consensus 305 ~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~ 334 (361)
T KOG1006|consen 305 RFINTCLIKDRSDRPKYDDLKKFPFYRMYA 334 (361)
T ss_pred HHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence 999999999999999999999999998643
No 375
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-35 Score=267.94 Aligned_cols=284 Identities=30% Similarity=0.513 Sum_probs=215.6
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.+-.+.||.|+||.||..+|..+++.||+|.+..-. .....+++|+++|.-+ .|.||+..++...-..++.
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF------kHdNVLSaLDILQPph~df 128 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF------RHDNVLSLLDILQPANPSF 128 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh------ccccHHHHHHhcCCCCchH
Confidence 345578999999999999999999999999654322 3356788999999999 6777877777665432221
Q ss_pred -ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 -QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 -~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+.+|++.|.|..+|..++.+- +.++...++-+.+||+.||+|||+. +|.||||||.|.++
T Consensus 129 FqEiYV~TELmQSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLV---------------- 189 (449)
T KOG0664|consen 129 FQELYVLTELMQSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLV---------------- 189 (449)
T ss_pred HHHHHHHHHHHHhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEe----------------
Confidence 368899999999999988754 3588899999999999999999996 99999999999999
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc----
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---- 269 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---- 269 (447)
+.++.+|+||||++...+..
T Consensus 190 --------------------------------------------------------NSNCvLKICDFGLARvee~d~~~h 213 (449)
T KOG0664|consen 190 --------------------------------------------------------NSNCILKICDFGLARTWDQRDRLN 213 (449)
T ss_pred --------------------------------------------------------ccCceEEecccccccccchhhhhh
Confidence 45788999999999765533
Q ss_pred cccCCCCCCccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh---hhC
Q 013220 270 FAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI---AIG 345 (447)
Q Consensus 270 ~~~~~gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~ 345 (447)
-+..+-|.+|+|||++.+. .|+.++||||+|||+.+|+..+..|... +...+++.+.+++|++..+- ...
T Consensus 214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq------~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA------GPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc------ChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 2344678999999999986 4899999999999999999999999766 57889999999999988542 111
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccccc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
+.+..-...-...-..-+.++..+ +..-..+..+++.+||++||++|++.++++.|++..+.+
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS-----------~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIAS-----------PDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecC-----------CcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 111111110000000000000000 011234677899999999999999999999999988754
No 376
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.5e-33 Score=265.72 Aligned_cols=249 Identities=21% Similarity=0.376 Sum_probs=189.4
Q ss_pred ceEEEEeecccCceEEEEEEeCC-CCeEEEEEEechh-----------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeec
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTR-TSSYVALKIQKSA-----------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLI 104 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~-----------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~ 104 (447)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+... ......+..|+.++.... +|+||++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~ 75 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL-----RHPNIVRYY 75 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcC-----CCCCeeeEE
Confidence 38889999999999999999887 6889999976422 122345666777776532 899999999
Q ss_pred ccccccCCCcceEEEEEecc-cccHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecC
Q 013220 105 DHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYS--RYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTI 181 (447)
Q Consensus 105 ~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~ 181 (447)
+.+.. +...+++|||+ +++|.+.+... ....+++..+..++.|++.||.|||++.+++|+||+|+||++
T Consensus 76 ~~~~~----~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---- 147 (269)
T cd08528 76 KTFLE----NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---- 147 (269)
T ss_pred eeEcc----CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE----
Confidence 98875 36899999999 77888776432 223588899999999999999999963389999999999999
Q ss_pred CCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecC
Q 013220 182 DPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFG 261 (447)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg 261 (447)
+....++|+|||
T Consensus 148 --------------------------------------------------------------------~~~~~~~l~dfg 159 (269)
T cd08528 148 --------------------------------------------------------------------GEDDKVTITDFG 159 (269)
T ss_pred --------------------------------------------------------------------CCCCcEEEeccc
Confidence 335679999999
Q ss_pred cccccccc--cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCC
Q 013220 262 NACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP 339 (447)
Q Consensus 262 ~a~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (447)
.+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+ .. .....+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~------~~---~~~~~~~~~~~ 230 (269)
T cd08528 160 LAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN------ML---SLATKIVEAVY 230 (269)
T ss_pred ceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC------HH---HHHHHHhhccC
Confidence 99754433 233467889999999998889999999999999999999999996432 11 11111100000
Q ss_pred HHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 340 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
. .......+..+.+||.+||+.||++||++.|+.++
T Consensus 231 ~-------------------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 231 E-------------------------------------PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred C-------------------------------------cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0 00011235688999999999999999999998764
No 377
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=285.09 Aligned_cols=246 Identities=24% Similarity=0.334 Sum_probs=194.9
Q ss_pred CceEEEEeecccCceEEEEEEeCCCC----eEEEEEEech----hHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTS----SYVALKIQKS----AAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~----~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.+-.+.++||+|+||.||+|.....+ ..||+|..+. .......+.+|.++++.+ +|+|||++||+.
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l------~H~NVVr~yGVa 230 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL------NHPNVVRFYGVA 230 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC------CCCCEEEEEEEE
Confidence 45567789999999999999765432 2389998774 234567899999999999 899999999988
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKD 186 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~ 186 (447)
... ..+++|||+| ||+|.+++.... ..++..+...++.+.+.||+|||++ ++|||||-.+|+|++.
T Consensus 231 ~~~----~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~------- 297 (474)
T KOG0194|consen 231 VLE----EPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSK------- 297 (474)
T ss_pred cCC----CccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecC-------
Confidence 754 7899999999 999999997654 2588999999999999999999997 9999999999999943
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc
Q 013220 187 PIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA 266 (447)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~ 266 (447)
...+|++|||++...
T Consensus 298 -----------------------------------------------------------------~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 298 -----------------------------------------------------------------KGVVKISDFGLSRAG 312 (474)
T ss_pred -----------------------------------------------------------------CCeEEeCccccccCC
Confidence 455899999998655
Q ss_pred cccccc---CCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 267 NKQFAE---EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 267 ~~~~~~---~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
...... .--+..|+|||.+....|++++|||||||++|++++ |..||.+.. .....+.+..-
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~------~~~v~~kI~~~-------- 378 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK------NYEVKAKIVKN-------- 378 (474)
T ss_pred cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC------HHHHHHHHHhc--------
Confidence 421111 123678999999999999999999999999999998 788998763 22111111110
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
..+...+...+.++..++.+|+..||++|||+.++.+
T Consensus 379 --------------------------------~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 379 --------------------------------GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred --------------------------------CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 0111244556788999999999999999999988863
No 378
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.3e-32 Score=265.27 Aligned_cols=249 Identities=23% Similarity=0.319 Sum_probs=187.1
Q ss_pred eEEEEeecccCceEEEEEEeC---CCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDT---RTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
|++.+.||+|+||.||+|.+. .++..||+|+++.+ ....+.+.+|+++++.+ +|+||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF------DHPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC------CCCCcceEEEEEccCC
Confidence 677889999999999999754 35789999987653 23345678899999999 7899999999876543
Q ss_pred CCc--ceEEEEEecc-cccHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 112 PNG--QHLCMVLEFL-GDSLLRLIKYSRY----KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 112 ~~~--~~~~lvmE~~-~~~L~~~~~~~~~----~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
..+ ...++++||+ ++++...+..... ..++...+..++.|++.||+|||++ ||+||||||+||++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili------- 146 (273)
T cd05074 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCML------- 146 (273)
T ss_pred CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEE-------
Confidence 222 2457899999 7888776643221 1367888999999999999999997 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+....++|+|||.+.
T Consensus 147 -----------------------------------------------------------------~~~~~~kl~dfg~~~ 161 (273)
T cd05074 147 -----------------------------------------------------------------NENMTVCVADFGLSK 161 (273)
T ss_pred -----------------------------------------------------------------cCCCCEEECcccccc
Confidence 335679999999987
Q ss_pred cccccc-----ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 265 RANKQF-----AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 265 ~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
...... ....++..|++||.+....++.++|||||||++|+|++ |..||...+ . ..... .+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~------~-~~~~~--~~~~~- 231 (273)
T cd05074 162 KIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE------N-SEIYN--YLIKG- 231 (273)
T ss_pred cccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC------H-HHHHH--HHHcC-
Confidence 543221 12234678999999998889999999999999999998 888886442 1 11100 00000
Q ss_pred CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.....+...+..+.+++.+||..+|++||++.+++.+
T Consensus 232 -------------------------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 232 -------------------------------------NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred -------------------------------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0001122345689999999999999999999999853
No 379
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-33 Score=280.11 Aligned_cols=268 Identities=22% Similarity=0.367 Sum_probs=211.3
Q ss_pred CCccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCc
Q 013220 22 GGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNE 97 (447)
Q Consensus 22 ~~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~ 97 (447)
+.|..++=..+-. .-|..++-||-|+||.|-+++...|...||.|.+.+... ...++..|-.||...+ +
T Consensus 616 SnYiRLkRaKMdK-SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD------n 688 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDK-SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD------N 688 (1034)
T ss_pred hhHHHHHHhhccc-cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC------C
Confidence 3555555555554 569999999999999999999999999999998765542 2346777999999994 5
Q ss_pred ceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeE
Q 013220 98 KCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENIL 176 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nil 176 (447)
.-||++|=.|.+. +.+|+||+|+ ||++-+++.+. .-|+|..++.++..+..|++++|. +|.|||||||+|||
T Consensus 689 ~WVVrLyySFQDk----dnLYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHk-mGFIHRDiKPDNIL 761 (1034)
T KOG0608|consen 689 EWVVRLYYSFQDK----DNLYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNIL 761 (1034)
T ss_pred cceEEEEEEeccC----CceEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHh-ccceecccCccceE
Confidence 5599999888864 8999999999 99999988754 348999999999999999999998 79999999999999
Q ss_pred eeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccccee
Q 013220 177 LVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCK 256 (447)
Q Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 256 (447)
| +.++.+|
T Consensus 762 I------------------------------------------------------------------------DrdGHIK 769 (1034)
T KOG0608|consen 762 I------------------------------------------------------------------------DRDGHIK 769 (1034)
T ss_pred E------------------------------------------------------------------------ccCCcee
Confidence 9 6789999
Q ss_pred EeecCccccc--c---------------c-----------c-----------------cccCCCCCCccChHHhhcCCCC
Q 013220 257 VVDFGNACRA--N---------------K-----------Q-----------------FAEEIQTRQYRAPEVILRAGYS 291 (447)
Q Consensus 257 L~Dfg~a~~~--~---------------~-----------~-----------------~~~~~gt~~y~aPE~l~~~~~~ 291 (447)
|.|||+|.-. . . . ....+||+-|+|||++.+..|+
T Consensus 770 LTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~ 849 (1034)
T KOG0608|consen 770 LTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYT 849 (1034)
T ss_pred eeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcc
Confidence 9999999311 0 0 0 0112689999999999999999
Q ss_pred ccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchh
Q 013220 292 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD 371 (447)
Q Consensus 292 ~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (447)
..+|.||.|||||+|+.|+.||-.....+++.... +|+
T Consensus 850 q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~------------------------------------------nw~ 887 (1034)
T KOG0608|consen 850 QLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVI------------------------------------------NWR 887 (1034)
T ss_pred ccchhhHhhHHHHHHhhCCCCccCCCCCcceeeee------------------------------------------ehh
Confidence 99999999999999999999998887655422111 111
Q ss_pred HHhhhhcCCChhhHHHHHHHHhhccccCCCCCC---ChHHHhcCcccccccC
Q 013220 372 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP---TAQQCLQHPWLSLRNS 420 (447)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp---ta~elL~hp~f~~~~~ 420 (447)
..+.-. .-.+.+.++.+||.+++ .++++|+ -++|+-+||||+.++=
T Consensus 888 ~~l~~~--~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 888 NFLHIP--YQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred hccccc--cccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 111111 12345778999998875 5688997 4788999999998753
No 380
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4e-32 Score=261.92 Aligned_cols=243 Identities=21% Similarity=0.278 Sum_probs=175.7
Q ss_pred eecccCceEEEEEEeCC--CCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEE
Q 013220 43 KLGWGQFSIVWLAYDTR--TSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLC 118 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~ 118 (447)
+||+|+||.||+|.... ....+++|.+.... .....+.+|+.+++.+ +|+||+++++.+... ...+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~~~----~~~~ 71 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL------QHPNILQCLGQCVEA----IPYL 71 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc------CCcchhheEEEecCC----CccE
Confidence 68999999999996433 33456777655432 3356788899999888 899999999988753 6899
Q ss_pred EEEecc-cccHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 119 MVLEFL-GDSLLRLIKYSR--YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 119 lvmE~~-~~~L~~~~~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
+||||+ +++|.+++.... ....++..+..++.||+.||+|||++ +++|+||||+||++
T Consensus 72 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~------------------ 132 (268)
T cd05086 72 LVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFL------------------ 132 (268)
T ss_pred EEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEE------------------
Confidence 999999 789998886532 23356677889999999999999996 99999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-----cc
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QF 270 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~-----~~ 270 (447)
+....++|+|||++..... ..
T Consensus 133 ------------------------------------------------------~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 133 ------------------------------------------------------TSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred ------------------------------------------------------cCCccEEecccccccccCcchhhhcc
Confidence 3356799999998753221 12
Q ss_pred ccCCCCCCccChHHhhc-------CCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 271 AEEIQTRQYRAPEVILR-------AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~-------~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
...+++..|+|||++.. ..++.++|||||||++|+|++ |..||...+ ....+..+.. .....+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~---~~~~~~ 229 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS------DREVLNHVIK---DQQVKL 229 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHh---hccccc
Confidence 23467889999999853 235789999999999999997 566775432 1111111110 000000
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
..+.+....++.+.+++..|| .+|++|||++++++
T Consensus 230 ---------------------------------~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 230 ---------------------------------FKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ---------------------------------CCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 001122234567888999999 68999999999974
No 381
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-32 Score=268.03 Aligned_cols=272 Identities=22% Similarity=0.308 Sum_probs=209.8
Q ss_pred ccCCCCCCCccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCC
Q 013220 15 GIDSYRKGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDP 94 (447)
Q Consensus 15 ~~~~~~~~~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~ 94 (447)
.+.....|+..|+.+..+++ ++.++++.||+|.||.||+|++ .|+.||||++..+++ +.+++|.++.+.+.-
T Consensus 191 ~~~tSGSGSGlplLVQRTia-rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE--~SWfrEtEIYqTvmL--- 262 (513)
T KOG2052|consen 191 DLETSGSGSGLPLLVQRTIA-RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDE--RSWFRETEIYQTVML--- 262 (513)
T ss_pred hhccCCCCCCchhHhHHhhh-heeEEEEEecCccccceeeccc--cCCceEEEEecccch--hhhhhHHHHHHHHHh---
Confidence 33455667888999999997 7999999999999999999977 488999999988765 789999999998753
Q ss_pred CCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhC-------Ccc
Q 013220 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL-------GII 166 (447)
Q Consensus 95 ~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~-------gIi 166 (447)
.|.||+.++++=.....+--++|||.+|. .|+|++++.+. .++.+...+++..++.||++||... .|.
T Consensus 263 -RHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIA 338 (513)
T KOG2052|consen 263 -RHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIA 338 (513)
T ss_pred -ccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhh
Confidence 89999999997554433335899999999 89999999763 4899999999999999999999742 589
Q ss_pred cccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCc
Q 013220 167 HTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPER 246 (447)
Q Consensus 167 H~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (447)
|||||..||||
T Consensus 339 HRDlKSKNILV--------------------------------------------------------------------- 349 (513)
T KOG2052|consen 339 HRDLKSKNILV--------------------------------------------------------------------- 349 (513)
T ss_pred ccccccccEEE---------------------------------------------------------------------
Confidence 99999999999
Q ss_pred cCCCcccceeEeecCcccccc-------cccccCCCCCCccChHHhhcCC----C-C-ccchhHhHHHHHHHHhhC----
Q 013220 247 CLDGIDMRCKVVDFGNACRAN-------KQFAEEIQTRQYRAPEVILRAG----Y-S-FSVDMWSFACTAFELATG---- 309 (447)
Q Consensus 247 ~~~~~~~~~kL~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~l~~~~----~-~-~~~DiwSlGvil~~l~~g---- 309 (447)
..++.+.++|+|+|.... -+....+||.+|||||++.... + + ..+||||||+|+|++...
T Consensus 350 ---Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~g 426 (513)
T KOG2052|consen 350 ---KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESG 426 (513)
T ss_pred ---ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 557789999999996433 3355679999999999997642 3 2 459999999999998764
Q ss_pred ------CCCCCCCCCCCCCCchHHHHHHHHH---hCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCC
Q 013220 310 ------DMLFAPKSGQGFCEDEDHLALMMEL---IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRF 380 (447)
Q Consensus 310 ------~~Pf~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (447)
+.||.+.-.. ..+..+|..++.+ ....|..| .
T Consensus 427 gi~eey~~Pyyd~Vp~--DPs~eeMrkVVCv~~~RP~ipnrW-------------------------------------~ 467 (513)
T KOG2052|consen 427 GIVEEYQLPYYDVVPS--DPSFEEMRKVVCVQKLRPNIPNRW-------------------------------------K 467 (513)
T ss_pred CEehhhcCCcccCCCC--CCCHHHHhcceeecccCCCCCccc-------------------------------------c
Confidence 4677654211 1233333333321 11111111 1
Q ss_pred ChhhHHHHHHHHhhccccCCCCCCChHHH
Q 013220 381 SETDAREFAEFLVPLLDFTPEKRPTAQQC 409 (447)
Q Consensus 381 ~~~~~~~l~~ll~~~L~~dP~kRpta~el 409 (447)
..+....+..+++.||..||..|.||-.+
T Consensus 468 s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 468 SDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred cCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 22345577899999999999999998554
No 382
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-32 Score=260.27 Aligned_cols=263 Identities=23% Similarity=0.338 Sum_probs=214.2
Q ss_pred cCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
+-+.|.+.+.||.|+|+.|-++++..+.+.||+|++++.-. ..+-...|-.+..... +||.+|.+..+|..
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-----n~pflvglhscfqt 322 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NNPFLVGLHSCFQT 322 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-----CCCeEEehhhhhcc
Confidence 34679999999999999999999999999999999886532 2233455666666654 89999999999984
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcc
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPI 188 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~ 188 (447)
...+++|.||+ ||+|-..+.+. +.++++.++.+...|+.||.|||+. |||.||+|.+|+|+
T Consensus 323 ----esrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~r-giiyrdlkldnvll----------- 384 (593)
T KOG0695|consen 323 ----ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLL----------- 384 (593)
T ss_pred ----cceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEE-----------
Confidence 47899999999 88887777654 4599999999999999999999997 99999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc--
Q 013220 189 RSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA-- 266 (447)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~-- 266 (447)
+..+.+||.|+|.++.-
T Consensus 385 -------------------------------------------------------------daeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 385 -------------------------------------------------------------DAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred -------------------------------------------------------------ccCCceeecccchhhcCCC
Confidence 66889999999999742
Q ss_pred -ccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 267 -NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 267 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
.+..+.+|||+-|.|||++.+..|.+.+|.|+|||+|++|++|+.||.---... .+...-+.+
T Consensus 404 ~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n--~d~ntedyl-------------- 467 (593)
T KOG0695|consen 404 PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN--PDMNTEDYL-------------- 467 (593)
T ss_pred CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC--cccchhHHH--------------
Confidence 234456899999999999999999999999999999999999999996432110 011111111
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC------ChHHHhcCccccccc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP------TAQQCLQHPWLSLRN 419 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp------ta~elL~hp~f~~~~ 419 (447)
+.-++..+.++|+..+-.+..+|+.-|..||.+|. -..++-.|+||+...
T Consensus 468 ------------------------fqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 468 ------------------------FQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred ------------------------HHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 23355566678888888888999999999999996 368999999999664
Q ss_pred C
Q 013220 420 S 420 (447)
Q Consensus 420 ~ 420 (447)
=
T Consensus 524 w 524 (593)
T KOG0695|consen 524 W 524 (593)
T ss_pred H
Confidence 3
No 383
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-34 Score=294.33 Aligned_cols=270 Identities=25% Similarity=0.333 Sum_probs=201.1
Q ss_pred eEEEEeecccCceE-EEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 38 YIAQRKLGWGQFSI-VWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 38 y~l~~~lG~G~~g~-Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
|.-.+.+|.|+.|+ ||+|.. .++.||||.+... ......+|+.+|+.-+ .|+|||+++..=. +.++
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e--~~~~A~rEi~lL~eSD-----~H~NviRyyc~E~----d~qF 577 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE--FFDFAQREIQLLQESD-----EHPNVIRYYCSEQ----DRQF 577 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhH--hHHHHHHHHHHHHhcc-----CCCceEEEEeecc----CCce
Confidence 34445689999984 999954 5789999965543 3457789999999987 9999999998754 3479
Q ss_pred EEEEEecccccHHHHHHhh-ccCCCCH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 117 LCMVLEFLGDSLLRLIKYS-RYKGLEL-NKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 117 ~~lvmE~~~~~L~~~~~~~-~~~~l~~-~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
.||..|.|.-+|.+++... ....+.. -..+.+..|++.||++||+ ++|||||+||.||||.....
T Consensus 578 ~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~------------ 644 (903)
T KOG1027|consen 578 LYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSA------------ 644 (903)
T ss_pred EEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCC------------
Confidence 9999999999999988753 1111111 3457889999999999999 69999999999999965311
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-----
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----- 269 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~----- 269 (447)
+...+++|+|||+|++....
T Consensus 645 -------------------------------------------------------~~~~ra~iSDfglsKkl~~~~sS~~ 669 (903)
T KOG1027|consen 645 -------------------------------------------------------DGTLRAKISDFGLSKKLAGGKSSFS 669 (903)
T ss_pred -------------------------------------------------------CcceeEEecccccccccCCCcchhh
Confidence 33578999999999876532
Q ss_pred -cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhC-CCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 270 -FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG-DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 270 -~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
.....||..|+|||++...+-+.++||+||||++|+.++| ..||.+....+
T Consensus 670 r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--------------------------- 722 (903)
T KOG1027|consen 670 RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--------------------------- 722 (903)
T ss_pred cccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh---------------------------
Confidence 2233689999999999998888999999999999998875 89997652100
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcC---CChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYR---FSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 424 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~~ 424 (447)
..|+..... +....-.++.|||.+||+++|.+||+|.++|.||||=....+..-
T Consensus 723 -----------------------~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL~F 779 (903)
T KOG1027|consen 723 -----------------------ANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRLSF 779 (903)
T ss_pred -----------------------hhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHHHH
Confidence 001111110 111111178899999999999999999999999999877666655
Q ss_pred ccccCCceeecccc
Q 013220 425 TKNKSNVEKVDVGM 438 (447)
Q Consensus 425 ~~~~~~~~~~~~~~ 438 (447)
.+..|+........
T Consensus 780 l~dvSDRvE~e~r~ 793 (903)
T KOG1027|consen 780 LRDVSDRVEKENRD 793 (903)
T ss_pred HHhhhhhhhhhhcc
Confidence 55555554444333
No 384
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-32 Score=291.92 Aligned_cols=247 Identities=21% Similarity=0.330 Sum_probs=200.0
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCC-----eEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTS-----SYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
..+-++.+.||+|.||.||.|+..... ..||+|.++.. ......|.+|..+|..+ +|||||+++++.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f------~HpNiv~liGv~ 764 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF------DHPNIVSLIGVC 764 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC------CCcceeeEEEee
Confidence 467889999999999999999755433 34899987754 44566899999999999 899999999998
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR-----YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTI 181 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~-----~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~ 181 (447)
... ...+|++||| +|+|.+++...+ ...+.......++.+|+.|+.||+++ +.|||||-.+|+|+
T Consensus 765 l~~----~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL---- 835 (1025)
T KOG1095|consen 765 LDS----GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLL---- 835 (1025)
T ss_pred cCC----CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheee----
Confidence 864 5788999999 999999997652 23488999999999999999999996 99999999999999
Q ss_pred CCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecC
Q 013220 182 DPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFG 261 (447)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg 261 (447)
+....+|++|||
T Consensus 836 --------------------------------------------------------------------~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 836 --------------------------------------------------------------------DERRVVKIADFG 847 (1025)
T ss_pred --------------------------------------------------------------------cccCcEEEcccc
Confidence 345779999999
Q ss_pred ccccccccc-ccC----CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHh
Q 013220 262 NACRANKQF-AEE----IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELI 335 (447)
Q Consensus 262 ~a~~~~~~~-~~~----~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
+|.-+-... ... .-+..|||||.+....|+.|+|||||||++||+++ |..||++.+ +.+.+...++
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~------n~~v~~~~~~-- 919 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS------NFEVLLDVLE-- 919 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc------hHHHHHHHHh--
Confidence 997332211 111 22568999999999999999999999999999997 899998764 2222221111
Q ss_pred CCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 336 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
..+.+.|+.+++.+-+++..||+.+|++||++..|++
T Consensus 920 ---------------------------------------ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 920 ---------------------------------------GGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ---------------------------------------CCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 1133456778889999999999999999999999986
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=273.11 Aligned_cols=268 Identities=27% Similarity=0.389 Sum_probs=207.1
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH--------hHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--------FAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
+.||.++..||.|+|+.||+|-|....+.||+|+-..++. .....-+|.++.+.| +|+.||++|++
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL------DHpRIVKlYDy 535 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL------DHPRIVKLYDY 535 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc------Ccceeeeeeee
Confidence 3799999999999999999999999999999997543332 234566789999999 88999999999
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhh-CCcccccCCCCCeEeeecCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRE-LGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~gIiH~Dikp~Nill~~~~~~~ 184 (447)
|.. +.+.+|-|+||| |.+|...++.. +.+++++++.|+.||+.||.||... ..|||-|+||.|||+..-
T Consensus 536 fsl---DtdsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G---- 606 (775)
T KOG1151|consen 536 FSL---DTDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG---- 606 (775)
T ss_pred eee---ccccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC----
Confidence 976 347899999999 77777666644 4599999999999999999999973 479999999999999431
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
..-+.+|+.|||+++
T Consensus 607 -----------------------------------------------------------------tacGeIKITDFGLSK 621 (775)
T KOG1151|consen 607 -----------------------------------------------------------------TACGEIKITDFGLSK 621 (775)
T ss_pred -----------------------------------------------------------------cccceeEeeecchhh
Confidence 123579999999998
Q ss_pred cccccc----------ccCCCCCCccChHHhhcC--C--CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHH
Q 013220 265 RANKQF----------AEEIQTRQYRAPEVILRA--G--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLAL 330 (447)
Q Consensus 265 ~~~~~~----------~~~~gt~~y~aPE~l~~~--~--~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~ 330 (447)
.++... ....||.||++||.+... + .+.++|+||+|||+|+.+.|+-||..... -+.
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs---------QQd 692 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS---------QQD 692 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh---------HHH
Confidence 776432 223689999999998643 2 57899999999999999999999975421 111
Q ss_pred HHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhh-hcCCC--hhhHHHHHHHHhhccccCCCCCCChH
Q 013220 331 MMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVD-KYRFS--ETDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
+++.- .++.. ...|| +-++.++.+||++||++--++|....
T Consensus 693 ILqeN------------------------------------TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~ 736 (775)
T KOG1151|consen 693 ILQEN------------------------------------TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQ 736 (775)
T ss_pred HHhhh------------------------------------chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHH
Confidence 11110 00000 00122 23567899999999999999999999
Q ss_pred HHhcCcccccccCCcccccc
Q 013220 408 QCLQHPWLSLRNSTRDETKN 427 (447)
Q Consensus 408 elL~hp~f~~~~~~~~~~~~ 427 (447)
++..||+|..+.-+...+..
T Consensus 737 qLA~dpyllPh~rrs~s~gs 756 (775)
T KOG1151|consen 737 QLACDPYLLPHIRRSVSTGS 756 (775)
T ss_pred HHccCccccchhhhccccCC
Confidence 99999999986544444433
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.3e-30 Score=270.64 Aligned_cols=273 Identities=19% Similarity=0.270 Sum_probs=181.5
Q ss_pred cCCceEEEEeecccCceEEEEEEeC----------------CCCeEEEEEEechhHHh---------------HHHHHHH
Q 013220 34 NGGRYIAQRKLGWGQFSIVWLAYDT----------------RTSSYVALKIQKSAAQF---------------AQAALHE 82 (447)
Q Consensus 34 ~~~~y~l~~~lG~G~~g~Vy~a~~~----------------~~~~~vaiK~~~~~~~~---------------~~~~~~E 82 (447)
..++|.+.++||+|+||+||+|... ..++.||||.++..... .+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4578999999999999999999642 23567999987643211 1123346
Q ss_pred HHHHHHhhcCCCCCcceeeeecccccccCC----CcceEEEEEecc-cccHHHHHHhhc---------------------
Q 013220 83 IEVLSAVADGDPSNEKCVIRLIDHFKHAGP----NGQHLCMVLEFL-GDSLLRLIKYSR--------------------- 136 (447)
Q Consensus 83 ~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~----~~~~~~lvmE~~-~~~L~~~~~~~~--------------------- 136 (447)
+.++..+.+.. ..+.++++++++|..... +....++||||+ +++|.+++....
T Consensus 223 ~~~l~~l~~~~-l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 223 AYMCAKIKRNP-IAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHhhccc-chhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 66666665432 134566777777664322 234689999999 888888775321
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHH
Q 013220 137 -YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVE 215 (447)
Q Consensus 137 -~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (447)
...++...++.++.|++.+|+|||+. +|+||||||+||++
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl-------------------------------------- 342 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLV-------------------------------------- 342 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEE--------------------------------------
Confidence 01235567888999999999999996 99999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--cc--CCCCCCccChHHhhcCC--
Q 013220 216 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--AE--EIQTRQYRAPEVILRAG-- 289 (447)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--~~--~~gt~~y~aPE~l~~~~-- 289 (447)
+....++|+|||++....... .. ..+++.|+|||.+....
T Consensus 343 ----------------------------------~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~ 388 (507)
T PLN03224 343 ----------------------------------TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSC 388 (507)
T ss_pred ----------------------------------CCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCC
Confidence 335679999999986433211 11 23478999999985321
Q ss_pred ------------------C--CccchhHhHHHHHHHHhhCCC-CCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 290 ------------------Y--SFSVDMWSFACTAFELATGDM-LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 290 ------------------~--~~~~DiwSlGvil~~l~~g~~-Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
| ..+.|+||+||++|+|++|.. ||....... ...+........|
T Consensus 389 ~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~---------~~~~~~~~~~~~~------ 453 (507)
T PLN03224 389 PRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFN---------TELRQYDNDLNRW------ 453 (507)
T ss_pred CccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhh---------hHHhhccchHHHH------
Confidence 1 135799999999999999875 664321000 0000000000000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhc--CCChhhHHHHHHHHhhccccCC---CCCCChHHHhcCccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKY--RFSETDAREFAEFLVPLLDFTP---EKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ll~~~L~~dP---~kRpta~elL~hp~f~~ 417 (447)
........ ......++...|||.+||..+| .+|+|++|+|+||||..
T Consensus 454 ----------------------r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 454 ----------------------RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred ----------------------HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00000011 1223456789999999999876 68999999999999964
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.2e-30 Score=244.84 Aligned_cols=239 Identities=36% Similarity=0.553 Sum_probs=189.8
Q ss_pred CceEEEEEEeCCCCeEEEEEEechhHHh--HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-
Q 013220 48 QFSIVWLAYDTRTSSYVALKIQKSAAQF--AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL- 124 (447)
Q Consensus 48 ~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~- 124 (447)
+||.||+|.+..+++.+++|++...... .+.+.+|++.++.+ +|++|+++++.+... ...+++|||+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~----~~~~l~~e~~~ 70 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL------KHPNIVRLYDVFEDE----DKLYLVMEYCD 70 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC------CCCcHHHHHhheeeC----CEEEEEEeCCC
Confidence 5899999999888999999987754322 47888999999999 788999999988753 6899999999
Q ss_pred cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCC
Q 013220 125 GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSIN 204 (447)
Q Consensus 125 ~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (447)
+++|...+.... .++...+..++.+++.++.+||+. +++|+||+|+||++.
T Consensus 71 ~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~-------------------------- 121 (244)
T smart00220 71 GGDLFDLLKKRG--RLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLD-------------------------- 121 (244)
T ss_pred CCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEEC--------------------------
Confidence 559998886543 278899999999999999999996 999999999999993
Q ss_pred CCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc--cccCCCCCCccCh
Q 013220 205 GGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAP 282 (447)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~gt~~y~aP 282 (447)
....++|+|||.+...... .....++..|+||
T Consensus 122 ----------------------------------------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~p 155 (244)
T smart00220 122 ----------------------------------------------EDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAP 155 (244)
T ss_pred ----------------------------------------------CCCcEEEccccceeeeccccccccccCCcCCCCH
Confidence 3467999999999765542 3445678899999
Q ss_pred HHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhh
Q 013220 283 EVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI 362 (447)
Q Consensus 283 E~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (447)
|.+.+..++.++|+||||++++++++|..||.... + ...+.+.+.......
T Consensus 156 E~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~------~---~~~~~~~~~~~~~~~-------------------- 206 (244)
T smart00220 156 EVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD------Q---LLELFKKIGKPKPPF-------------------- 206 (244)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------c---HHHHHHHHhccCCCC--------------------
Confidence 99988888999999999999999999999996531 1 111222111111000
Q ss_pred hhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 363 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
.......+.++.+++.+||..+|++||++.++++||||
T Consensus 207 ---------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 207 ---------------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ---------------ccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 00000145688999999999999999999999999997
No 388
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.9e-31 Score=264.00 Aligned_cols=244 Identities=22% Similarity=0.333 Sum_probs=205.3
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
...+.++||-|.||.||-|.+++-...||||.++.+....++|..|..+|+.+ .|+|+|++++++... ..
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei------kHpNLVqLLGVCT~E----pP 337 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI------KHPNLVQLLGVCTHE----PP 337 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh------cCccHHHHhhhhccC----CC
Confidence 46789999999999999999999999999999999999999999999999999 899999999999864 68
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
+|||.||| -|.|++++.......++.-....++.||..|++||..+ +.||||+-.+|+|++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVg----------------- 399 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVG----------------- 399 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhcccc-----------------
Confidence 99999999 88888888776656677677888999999999999998 999999999999994
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc-cccCC
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAEEI 274 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~ 274 (447)
.+-.+|++|||++..+... .+...
T Consensus 400 -------------------------------------------------------EnhiVKvADFGLsRlMtgDTYTAHA 424 (1157)
T KOG4278|consen 400 -------------------------------------------------------ENHIVKVADFGLSRLMTGDTYTAHA 424 (1157)
T ss_pred -------------------------------------------------------ccceEEeeccchhhhhcCCceeccc
Confidence 3567999999999866533 23334
Q ss_pred C---CCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCcc
Q 013220 275 Q---TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK 350 (447)
Q Consensus 275 g---t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (447)
| +.-|.|||.+....++.|+|+|+|||+||++.+ |..||++.+ +..++.++.+.-
T Consensus 425 GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid----------lSqVY~LLEkgy----------- 483 (1157)
T KOG4278|consen 425 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID----------LSQVYGLLEKGY----------- 483 (1157)
T ss_pred CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc----------HHHHHHHHhccc-----------
Confidence 4 567999999999999999999999999999986 999998763 223333221100
Q ss_pred chhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHh
Q 013220 351 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL 410 (447)
+..-|..+++.+..|++.||+++|.+||++.|+-
T Consensus 484 --------------------------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 484 --------------------------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred --------------------------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 1124567788999999999999999999998874
No 389
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=7.9e-31 Score=262.53 Aligned_cols=252 Identities=23% Similarity=0.349 Sum_probs=202.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++..+.++||+|.||.|-+|.-. .+..||+|.++.++ .....|.+|+++|..+ .||||+++++++...
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL------khPNIveLvGVC~~D--- 607 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRL------KHPNIVELLGVCVQD--- 607 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhcc------CCCCeeEEEeeeecC---
Confidence 56789999999999999999753 36899999887654 3457899999999999 899999999999854
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGL 192 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~ 192 (447)
+.++++|||| .|+|.+++....-..++-+....++.||+.|++||.+ +++||||+-+.|||+
T Consensus 608 -ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv--------------- 670 (807)
T KOG1094|consen 608 -DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES-LNFVHRDLATRNCLV--------------- 670 (807)
T ss_pred -CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh-hchhhccccccceee---------------
Confidence 7899999999 8999999987643334455667799999999999999 699999999999999
Q ss_pred CCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc-
Q 013220 193 TPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA- 271 (447)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~- 271 (447)
+.++++|++|||.+...-....
T Consensus 671 ---------------------------------------------------------~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 671 ---------------------------------------------------------DGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred ---------------------------------------------------------cCcccEEecCcccccccccCCce
Confidence 6688999999999974332222
Q ss_pred ----cCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhh--CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 272 ----EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 272 ----~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~--g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
+.+-+..|+|||.+.-..+|+++|+|+|||++|+++. ..-||... ++++.++..-.++...+....
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~l------t~e~vven~~~~~~~~~~~~~-- 765 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQL------TDEQVVENAGEFFRDQGRQVV-- 765 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhh------hHHHHHHhhhhhcCCCCccee--
Confidence 2245789999999999999999999999999999875 66888665 455555555554444332211
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
+.-|.-++..+.+++.+||..|-++||+++++..
T Consensus 766 --------------------------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 766 --------------------------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred --------------------------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 1234455678889999999999999999999854
No 390
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=2.4e-30 Score=292.14 Aligned_cols=260 Identities=15% Similarity=0.234 Sum_probs=185.2
Q ss_pred ccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 28 ~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
..++.. ..|...+.||+|+||.||+|++..++..||+|.+..... ....|+++++.+ +||||+++++++
T Consensus 684 ~~~~~~--~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l------~HpnIv~~~~~~ 752 (968)
T PLN00113 684 TINDIL--SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKL------QHPNIVKLIGLC 752 (968)
T ss_pred hHHHHH--hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhC------CCCCcceEEEEE
Confidence 334444 357778899999999999999988999999998764322 223567888887 899999999998
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hhCCcccccCCCCCeEeeecCCC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH---RELGIIHTDLKPENILLVSTIDP 183 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH---~~~gIiH~Dikp~Nill~~~~~~ 183 (447)
... ...++||||+ +++|.+.+. .+++..+..++.|++.||+||| +. +|+|||+||+||++..
T Consensus 753 ~~~----~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~---- 818 (968)
T PLN00113 753 RSE----KGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDG---- 818 (968)
T ss_pred EcC----CCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECC----
Confidence 753 5789999999 889998874 2778889999999999999999 64 9999999999999933
Q ss_pred CCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcc
Q 013220 184 SKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA 263 (447)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a 263 (447)
....++. ++..
T Consensus 819 --------------------------------------------------------------------~~~~~~~-~~~~ 829 (968)
T PLN00113 819 --------------------------------------------------------------------KDEPHLR-LSLP 829 (968)
T ss_pred --------------------------------------------------------------------CCceEEE-eccc
Confidence 2233332 4333
Q ss_pred cccccccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 264 CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 264 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
..... .....++..|+|||++.+..++.++|||||||++|+|++|+.||...... ................
T Consensus 830 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~---- 900 (968)
T PLN00113 830 GLLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV----HGSIVEWARYCYSDCH---- 900 (968)
T ss_pred ccccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC----CCcHHHHHHHhcCccc----
Confidence 22111 12336789999999999888999999999999999999999999533110 1111111100000000
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
.... .+..+......+.....++.+++.+||+.||++|||++|+++.
T Consensus 901 -----~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 901 -----LDMW-----------------IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred -----hhhe-----------------eCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0000 0111111122334456678899999999999999999999876
No 391
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3e-30 Score=253.56 Aligned_cols=197 Identities=27% Similarity=0.378 Sum_probs=162.4
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
....++.+.||+|+||.||+|.. .++.||||++..... +.+.+|-++...... .|+||++++++=..-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~k--qs~~~Ek~Iy~lp~m----~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEK--QSFQNEKNIYSLPGM----KHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHH--HHHHhHHHHHhccCc----cchhHHHhhchhccCCccc
Confidence 35678999999999999999954 569999998876654 778889988888743 8999999998755432234
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhC--------CcccccCCCCCeEeeecCCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHREL--------GIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~--------gIiH~Dikp~Nill~~~~~~~~ 185 (447)
...+||++|. .|+|.+++..+. ++.....+++.-|+.||+|||+.. .|+|||||.+|||+
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv-------- 349 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV-------- 349 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE--------
Confidence 5899999999 899999997643 899999999999999999999842 69999999999999
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
..++.+.|+|||+|..
T Consensus 350 ----------------------------------------------------------------K~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 350 ----------------------------------------------------------------KNDLTCCIADFGLALR 365 (534)
T ss_pred ----------------------------------------------------------------ccCCcEEeeccceeEE
Confidence 5578899999999976
Q ss_pred ccc-----ccccCCCCCCccChHHhhcCC-CC-----ccchhHhHHHHHHHHhhCCCCCC
Q 013220 266 ANK-----QFAEEIQTRQYRAPEVILRAG-YS-----FSVDMWSFACTAFELATGDMLFA 314 (447)
Q Consensus 266 ~~~-----~~~~~~gt~~y~aPE~l~~~~-~~-----~~~DiwSlGvil~~l~~g~~Pf~ 314 (447)
... .....+||.+|||||++++.. +. .+.||||+|.|+|++++....+.
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~ 425 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDAD 425 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 541 223368999999999998752 22 46999999999999999876553
No 392
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=260.65 Aligned_cols=241 Identities=22% Similarity=0.326 Sum_probs=195.0
Q ss_pred eEEEEeecccCceEEEEEEeCCC----CeEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRT----SSYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
..+.++||.|.||.||.|..... +--||||.-|.+ ....+.|..|.-+++.+ +||||+++++++..
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf------dHphIikLIGv~~e-- 462 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF------DHPHIIKLIGVCVE-- 462 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC------CCcchhheeeeeec--
Confidence 45667899999999999954322 345888976664 34567899999999999 89999999999976
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
..+|||||.+ -|.|..++..+. ..++......+++||+.||+|||++ ..|||||-.+|||++.
T Consensus 463 ---~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsS----------- 526 (974)
T KOG4257|consen 463 ---QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSS----------- 526 (974)
T ss_pred ---cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecC-----------
Confidence 5899999999 788888886654 4588889999999999999999997 9999999999999944
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
..++||+|||++...++..
T Consensus 527 -------------------------------------------------------------p~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 527 -------------------------------------------------------------PQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred -------------------------------------------------------------cceeeecccchhhhccccc
Confidence 5679999999998766543
Q ss_pred ccC--C--CCCCccChHHhhcCCCCccchhHhHHHHHHHHh-hCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhC
Q 013220 271 AEE--I--QTRQYRAPEVILRAGYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG 345 (447)
Q Consensus 271 ~~~--~--gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (447)
... . -+.-|+|||.+...+++.++|+|=|||.||+++ .|.-||.+-..... +|...
T Consensus 546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV-------------I~~iE------ 606 (974)
T KOG4257|consen 546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV-------------IGHIE------ 606 (974)
T ss_pred hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce-------------EEEec------
Confidence 222 2 256799999999999999999999999999986 59999976632211 11100
Q ss_pred CCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHh
Q 013220 346 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL 410 (447)
..++++.|+++++.+..|+.+||..||.+||+++++.
T Consensus 607 ----------------------------nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 607 ----------------------------NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred ----------------------------CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 1245567889999999999999999999999998875
No 393
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=265.40 Aligned_cols=255 Identities=20% Similarity=0.263 Sum_probs=205.3
Q ss_pred cccCCceEEEEeecccCceEEEEEEeCCC---CeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 32 LFNGGRYIAQRKLGWGQFSIVWLAYDTRT---SSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 32 ~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
++..++..+.|+||+|.||.||+|.+... ...||||+++.+.. ....|.+|+.+|..+ .|+|++++|++
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L------~H~hliRLyGv 179 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL------QHPHLIRLYGV 179 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc------cCcceeEEeee
Confidence 45567788899999999999999987754 34699999887754 357899999999999 89999999999
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSK 185 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~ 185 (447)
..+ ..+.+|||.+ .|+|.+-+.......|-......++.||+.|+.||.++ ++||||+-.+|+++-
T Consensus 180 Vl~-----qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNllla------- 246 (1039)
T KOG0199|consen 180 VLD-----QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLA------- 246 (1039)
T ss_pred ecc-----chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheec-------
Confidence 875 4788999999 88888877654445678889999999999999999998 999999999999993
Q ss_pred CcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccc
Q 013220 186 DPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR 265 (447)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~ 265 (447)
....+|++|||+...
T Consensus 247 -----------------------------------------------------------------sprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 247 -----------------------------------------------------------------SPRTVKICDFGLMRA 261 (1039)
T ss_pred -----------------------------------------------------------------ccceeeeecccceec
Confidence 345699999999987
Q ss_pred cccccccCC------CCCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCC
Q 013220 266 ANKQFAEEI------QTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKM 338 (447)
Q Consensus 266 ~~~~~~~~~------gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (447)
.......++ -+..|+|||.+....++.++|+|++||++|+|++ |.-||.+-. -. .|++.+.
T Consensus 262 Lg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~------g~----qIL~~iD-- 329 (1039)
T KOG0199|consen 262 LGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR------GI----QILKNID-- 329 (1039)
T ss_pred cCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC------HH----HHHHhcc--
Confidence 665444432 2568999999999999999999999999999997 789997763 11 1111111
Q ss_pred CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 339 PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
-.++..-++.+++++.+++..||..+|++|||+..|.+.-+...
T Consensus 330 -----------------------------------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 330 -----------------------------------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred -----------------------------------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 01122235567899999999999999999999999876655544
No 394
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-31 Score=268.06 Aligned_cols=261 Identities=28% Similarity=0.404 Sum_probs=209.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHh-HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF-AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
++|.+..++|+|+||.||+|+++.+++..|+|+++..... ..-...|+-+++.. .|+||+.|++.|...
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc------~h~nivay~gsylr~---- 84 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC------RHPNIVAYFGSYLRR---- 84 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC------CCcChHHHHhhhhhh----
Confidence 6799999999999999999999999999999999877532 34566677777777 899999999998854
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+.+|++|||| |++|.+.+. ....+++.++...++..+.+|+|||+. |=+|||||..||++++
T Consensus 85 dklwicMEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd-------------- 147 (829)
T KOG0576|consen 85 DKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTD-------------- 147 (829)
T ss_pred cCcEEEEEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcC-Ccccccccccceeecc--------------
Confidence 7899999999 778877653 345689999999999999999999995 9999999999999944
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---c
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---F 270 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~ 270 (447)
.+.+||.|||.+-.+... .
T Consensus 148 ----------------------------------------------------------~gDvklaDfgvsaqitati~Kr 169 (829)
T KOG0576|consen 148 ----------------------------------------------------------EGDVKLADFGVSAQITATIAKR 169 (829)
T ss_pred ----------------------------------------------------------cCceeecccCchhhhhhhhhhh
Confidence 677999999998665533 2
Q ss_pred ccCCCCCCccChHHhh---cCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 271 AEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
..+.||++|+|||+.. ...|...+|||++|++..++..-+.|.... +....-.++...|..|..+...
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-------hpmr~l~LmTkS~~qpp~lkDk-- 240 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-------HPMRALFLMTKSGFQPPTLKDK-- 240 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-------chHHHHHHhhccCCCCCcccCC--
Confidence 3458999999999975 346899999999999999999888886543 3444444455444444332100
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCccc
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 424 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~~ 424 (447)
..-++.|.+|++.+|..+|.||||++.+|.|||+...-+++..
T Consensus 241 ----------------------------------~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~ 283 (829)
T KOG0576|consen 241 ----------------------------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLA 283 (829)
T ss_pred ----------------------------------ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHH
Confidence 1125578899999999999999999999999999987544443
No 395
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-30 Score=265.65 Aligned_cols=246 Identities=19% Similarity=0.301 Sum_probs=202.1
Q ss_pred CceEEEEeecccCceEEEEEEeCCCC---eEEEEEEechh--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTS---SYVALKIQKSA--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
...++.+.||.|.||.|++|+.+..+ ..||||.+|.. ++...+|+.|..||-.+ +||||+++.++....
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF------dHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF------DHPNIIRLEGVVTKS 702 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC------CCCcEEEEEEEEecC
Confidence 34678889999999999999877654 68999998854 55577899999999999 899999999998865
Q ss_pred CCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 111 GPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 111 ~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
..+.||.||| .++|..++..+. ..|..-++.-+.+.|+.|++||-+ +|+|||||-.+|||+
T Consensus 703 ----~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsd-m~YVHRDLAARNILV------------ 764 (996)
T KOG0196|consen 703 ----KPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSD-MNYVHRDLAARNILV------------ 764 (996)
T ss_pred ----ceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhh-cCchhhhhhhhheee------------
Confidence 6899999999 899999987654 448888888999999999999998 799999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
+.+..+|++|||++...++.
T Consensus 765 ------------------------------------------------------------NsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 765 ------------------------------------------------------------NSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred ------------------------------------------------------------ccceEEEeccccceeecccC
Confidence 45788999999999866433
Q ss_pred c-ccC---CC--CCCccChHHhhcCCCCccchhHhHHHHHHHHh-hCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHh
Q 013220 270 F-AEE---IQ--TRQYRAPEVILRAGYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 342 (447)
Q Consensus 270 ~-~~~---~g--t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (447)
. ..+ -| +.+|.|||.|....+|.++|+||+|++||+.+ .|.-||.+.+ +.+.+..+.+-...
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS------NQdVIkaIe~gyRL----- 853 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------NQDVIKAIEQGYRL----- 853 (996)
T ss_pred CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc------hHHHHHHHHhccCC-----
Confidence 2 222 12 47899999999999999999999999999977 5999998774 33444444332211
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
+-|-.++..+..|+..||++|-..||+++||+++
T Consensus 854 ------------------------------------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 854 ------------------------------------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ------------------------------------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 2233568899999999999999999999999754
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=226.15 Aligned_cols=201 Identities=22% Similarity=0.397 Sum_probs=167.3
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
+...-.++||.|++|.|-+-++..+|...|+|.+..+. +......+|+.+..+.. ..|.+|.+|+.+...
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~-----~CPf~V~FyGa~~re--- 117 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTV-----DCPFTVHFYGALFRE--- 117 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCC-----CCCeEEEeehhhhcc---
Confidence 34456678999999999999999999999999876543 33456677777766654 889999999987753
Q ss_pred cceEEEEEecccccHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 114 GQHLCMVLEFLGDSLLRLIKY--SRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 114 ~~~~~lvmE~~~~~L~~~~~~--~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
..+|+.||.|..+|..+... .....++|.-+-+++..++.||.|||+++.+||||+||.|||+
T Consensus 118 -gdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI-------------- 182 (282)
T KOG0984|consen 118 -GDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI-------------- 182 (282)
T ss_pred -ccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE--------------
Confidence 57999999998888877643 2334589999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 271 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~ 271 (447)
+..+++|+||||++-...++..
T Consensus 183 ----------------------------------------------------------n~~GqVKiCDFGIsG~L~dSiA 204 (282)
T KOG0984|consen 183 ----------------------------------------------------------NYDGQVKICDFGISGYLVDSIA 204 (282)
T ss_pred ----------------------------------------------------------ccCCcEEEcccccceeehhhhH
Confidence 5578999999999965554433
Q ss_pred c--CCCCCCccChHHhhc----CCCCccchhHhHHHHHHHHhhCCCCCCCCC
Q 013220 272 E--EIQTRQYRAPEVILR----AGYSFSVDMWSFACTAFELATGDMLFAPKS 317 (447)
Q Consensus 272 ~--~~gt~~y~aPE~l~~----~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~ 317 (447)
. ..|...|+|||.+.. ..|+-++||||||+++.+|.++++||....
T Consensus 205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 2 468899999999863 368999999999999999999999997653
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=254.34 Aligned_cols=198 Identities=23% Similarity=0.429 Sum_probs=174.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHH---------HHHHHHHHHHhhcCCCCCcceeeeeccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQA---------ALHEIEVLSAVADGDPSNEKCVIRLIDH 106 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~---------~~~E~~~l~~l~~~~~~~~~~Iv~~~~~ 106 (447)
..|.....+|+|+||.||+|.++.....|+||++.+.....+. +-.|+++|..+... .|+||++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~---sH~NIlKlLdf 637 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH---SHENILKLLDF 637 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc---Cccchhhhhhe
Confidence 5699999999999999999999999999999998877654443 44599999999654 69999999999
Q ss_pred ccccCCCcceEEEEEecc--cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 107 FKHAGPNGQHLCMVLEFL--GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~--~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
|.+. ++.||+||.. |-+|++++... ..++|.++..|++|++.|+++||+. ||||||||-+|+.+
T Consensus 638 FEdd----d~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenviv------- 703 (772)
T KOG1152|consen 638 FEDD----DYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIV------- 703 (772)
T ss_pred eecC----CeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhcccccccc-CceecccccccEEE-------
Confidence 9964 7999999999 56899999755 4499999999999999999999995 99999999999999
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
+.++.+||+|||.+.
T Consensus 704 -----------------------------------------------------------------d~~g~~klidfgsaa 718 (772)
T KOG1152|consen 704 -----------------------------------------------------------------DSNGFVKLIDFGSAA 718 (772)
T ss_pred -----------------------------------------------------------------ecCCeEEEeeccchh
Confidence 668899999999885
Q ss_pred -ccccccccCCCCCCccChHHhhcCCC-CccchhHhHHHHHHHHhhCCCCCCC
Q 013220 265 -RANKQFAEEIQTRQYRAPEVILRAGY-SFSVDMWSFACTAFELATGDMLFAP 315 (447)
Q Consensus 265 -~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~~l~~g~~Pf~~ 315 (447)
....+...++||..|.|||++-|.+| +..-|||+||+++|.++....||++
T Consensus 719 ~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 719 YTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 44567778899999999999999888 5779999999999999999999864
No 398
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=227.36 Aligned_cols=263 Identities=20% Similarity=0.247 Sum_probs=195.9
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.+.|.+.+.||+|.||.+-+|+|+.++..+++|.....-....+|.+|...--.|. .|.||+.-|++-. .+.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls-----~H~hIi~tY~vaF---qt~ 94 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLS-----PHQHIIDTYEVAF---QTS 94 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeec-----cchhhhHHHHHHh---hcC
Confidence 47899999999999999999999999999999987766666778888887655554 7889887776432 244
Q ss_pred ceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 115 QHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 115 ~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
+..+++|||+ -|+|.+-+.. .++.+...+.++.|+++||.|||++ +|||||||.+|||+-.
T Consensus 95 d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~-------------- 156 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFD-------------- 156 (378)
T ss_pred ceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEec--------------
Confidence 7899999999 7888876643 5688999999999999999999998 9999999999999955
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccC
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE 273 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 273 (447)
....++||||||.+.+.+......
T Consensus 157 --------------------------------------------------------~df~rvKlcDFG~t~k~g~tV~~~ 180 (378)
T KOG1345|consen 157 --------------------------------------------------------ADFYRVKLCDFGLTRKVGTTVKYL 180 (378)
T ss_pred --------------------------------------------------------CCccEEEeeecccccccCceehhh
Confidence 224589999999998776655444
Q ss_pred CCCCCccChHHhhcC---C--CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 274 IQTRQYRAPEVILRA---G--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~---~--~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
--+..|.+||..... . ..+..|+|.||+++|.+++|++||...... +..-...+.=.-++.+
T Consensus 181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~----d~~Y~~~~~w~~rk~~--------- 247 (378)
T KOG1345|consen 181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM----DKPYWEWEQWLKRKNP--------- 247 (378)
T ss_pred hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc----CchHHHHHHHhcccCc---------
Confidence 456789999987632 2 367899999999999999999999743211 1111111000000000
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCC---CChHHHhcCccccccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKR---PTAQQCLQHPWLSLRN 419 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kR---pta~elL~hp~f~~~~ 419 (447)
.-++.-...++.+..+.++-|.++|++| .+++..-...|..-..
T Consensus 248 ---------------------------~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i 294 (378)
T KOG1345|consen 248 ---------------------------ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLI 294 (378)
T ss_pred ---------------------------cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhh
Confidence 0001112235567778889999999999 7888887777775443
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2e-26 Score=210.39 Aligned_cols=208 Identities=39% Similarity=0.623 Sum_probs=177.6
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEE
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVL 121 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvm 121 (447)
||+|.+|.||++.+..+++.+++|++..... ..+.+.+|+++++.+ .|++|+++++.+... ...+++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~----~~~~~~~ 70 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL------NHPNIVKLYGVFEDE----NHLYLVM 70 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc------CCCCeeeEeeeeecC----CeEEEEE
Confidence 6899999999999988899999998876654 256789999999999 568999999998754 6899999
Q ss_pred ecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCC
Q 013220 122 EFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPE 200 (447)
Q Consensus 122 E~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 200 (447)
|++ +.+|.+++.... ..++...+..++.+++.++++||+. |++|+||+|.||++..
T Consensus 71 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~--------------------- 127 (215)
T cd00180 71 EYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDS--------------------- 127 (215)
T ss_pred ecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeC---------------------
Confidence 999 589998886542 3478899999999999999999996 9999999999999932
Q ss_pred CCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc---cccCCCCC
Q 013220 201 GSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTR 277 (447)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~~gt~ 277 (447)
....++|+|||.+...... .....+..
T Consensus 128 --------------------------------------------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (215)
T cd00180 128 --------------------------------------------------DNGKVKLADFGLSKLLTSDKSLLKTIVGTP 157 (215)
T ss_pred --------------------------------------------------CCCcEEEecCCceEEccCCcchhhcccCCC
Confidence 0457999999998765543 33456788
Q ss_pred CccChHHhhcC-CCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhccc
Q 013220 278 QYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 356 (447)
Q Consensus 278 ~y~aPE~l~~~-~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 356 (447)
.|.+||.+... .++.+.|+|++|++++++
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------------- 187 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------------- 187 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------------
Confidence 99999999877 788999999999999998
Q ss_pred chhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCc
Q 013220 357 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 413 (447)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp 413 (447)
..+.+++.+||+.||++||++.++++|+
T Consensus 188 -----------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 0567899999999999999999999885
No 400
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=5.8e-27 Score=250.62 Aligned_cols=247 Identities=22% Similarity=0.362 Sum_probs=191.8
Q ss_pred ceEEEEeecccCceEEEEEEeC---C----CCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDT---R----TSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~---~----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
+..+.+.||+|.||.||+|... . ....||+|.++... ...+.+..|+++++.+. .|+||+.+++++
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-----~H~niv~llG~~ 371 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-----KHPNIVNLLGAC 371 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-----CCcchhhheeee
Confidence 3467779999999999999532 1 25689999887554 33568899999999997 899999999998
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhc------c--------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCC
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSR------Y--------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~------~--------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp 172 (447)
.. ...+++|+||+ .|+|..++...+ . ..+.......++.||+.|++||+++ .+||||+-.
T Consensus 372 t~----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRDLAa 446 (609)
T KOG0200|consen 372 TQ----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRDLAA 446 (609)
T ss_pred cc----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-Cccchhhhh
Confidence 86 36899999999 889998887655 0 1277889999999999999999997 999999999
Q ss_pred CCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcc
Q 013220 173 ENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID 252 (447)
Q Consensus 173 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (447)
+|||+. .+
T Consensus 447 RNVLi~------------------------------------------------------------------------~~ 454 (609)
T KOG0200|consen 447 RNVLIT------------------------------------------------------------------------KN 454 (609)
T ss_pred hhEEec------------------------------------------------------------------------CC
Confidence 999993 45
Q ss_pred cceeEeecCccccccccc-cc---CCC--CCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCch
Q 013220 253 MRCKVVDFGNACRANKQF-AE---EIQ--TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDE 325 (447)
Q Consensus 253 ~~~kL~Dfg~a~~~~~~~-~~---~~g--t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~ 325 (447)
..+|++|||+++...... .. ..+ +..|+|||.+....|+.++|+||+||+||++++ |..||++.. ...
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-----~~~ 529 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-----PTE 529 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-----cHH
Confidence 679999999997433221 11 122 445999999999899999999999999999997 889997531 011
Q ss_pred HHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC
Q 013220 326 DHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT 405 (447)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt 405 (447)
..+. .+.. ..+..-|...++++.++++.||+.+|++||+
T Consensus 530 ~l~~----~l~~-------------------------------------G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~ 568 (609)
T KOG0200|consen 530 ELLE----FLKE-------------------------------------GNRMEQPEHCSDEIYDLMKSCWNADPEDRPT 568 (609)
T ss_pred HHHH----HHhc-------------------------------------CCCCCCCCCCCHHHHHHHHHHhCCCcccCCC
Confidence 1111 1100 0111244556778889999999999999999
Q ss_pred hHHHhc
Q 013220 406 AQQCLQ 411 (447)
Q Consensus 406 a~elL~ 411 (447)
+.++..
T Consensus 569 F~~~~~ 574 (609)
T KOG0200|consen 569 FSECVE 574 (609)
T ss_pred HHHHHH
Confidence 998863
No 401
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-27 Score=245.21 Aligned_cols=244 Identities=21% Similarity=0.294 Sum_probs=194.4
Q ss_pred CCceEEEEeecccCceEEEEEEeCCC----CeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRT----SSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
.-..+..++||+|+||+||+|.+... +-.||||++.... ....++.+|+-+|..+ +|+|++++++++.
T Consensus 695 Etelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl------dHpnl~RLLgvc~ 768 (1177)
T KOG1025|consen 695 ETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL------DHPNLLRLLGVCM 768 (1177)
T ss_pred hhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC------CCchHHHHhhhcc
Confidence 34566778899999999999977654 4478888766543 3467889999999999 8999999999998
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCc
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDP 187 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~ 187 (447)
.+ .+-||.+|+ .|+|.+++...+ ..+..+....|++||++|+.|||.+ +++||||-.+|+||
T Consensus 769 ~s-----~~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLV---------- 831 (1177)
T KOG1025|consen 769 LS-----TLQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLV---------- 831 (1177)
T ss_pred cc-----hHHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheee----------
Confidence 75 488999999 899999987655 4688899999999999999999996 99999999999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc
Q 013220 188 IRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN 267 (447)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~ 267 (447)
.....+|+.|||+++...
T Consensus 832 --------------------------------------------------------------ksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 832 --------------------------------------------------------------KSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred --------------------------------------------------------------cCCCeEEEEecchhhccC
Confidence 335679999999998655
Q ss_pred cccccC---CC--CCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHH
Q 013220 268 KQFAEE---IQ--TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 341 (447)
Q Consensus 268 ~~~~~~---~g--t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 341 (447)
.....+ .| ...|+|-|.+...+|+.++|+||+||++|+++| |.-||.+.+. ..+..+++.
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-------~eI~dlle~------- 915 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-------EEIPDLLEK------- 915 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-------HHhhHHHhc-------
Confidence 443332 12 567999999999999999999999999999986 8999977641 111111111
Q ss_pred hhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHh
Q 013220 342 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL 410 (447)
.++..-|+..+-++-.++.+||..|+..||+++++.
T Consensus 916 ---------------------------------geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 916 ---------------------------------GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred ---------------------------------cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 011234555677888999999999999999998875
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=1.7e-26 Score=255.25 Aligned_cols=217 Identities=17% Similarity=0.198 Sum_probs=147.1
Q ss_pred ceeeeecccccccCC---CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCC
Q 013220 98 KCVIRLIDHFKHAGP---NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPEN 174 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~~---~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~N 174 (447)
.||.++++.|....+ ....++++||+++++|.+.+... ...+++..++.+++||+.||+|||++ ||+||||||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrDlKP~N 110 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHNVRPSC 110 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC-CeeeccCCchh
Confidence 356666666533221 22468899999989999988643 34589999999999999999999996 99999999999
Q ss_pred eEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccc
Q 013220 175 ILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR 254 (447)
Q Consensus 175 ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (447)
||+..... -..++.+.. .. ...+....
T Consensus 111 iLl~~~~~--~k~~d~~~~-------------------------------------------------~~--~~~~~~~~ 137 (793)
T PLN00181 111 FVMSSFNH--VSFIESASC-------------------------------------------------SD--SGSDEDAT 137 (793)
T ss_pred EEEcccCc--EEEeecccc-------------------------------------------------Cc--ccccccCc
Confidence 99953110 000000000 00 00023456
Q ss_pred eeEeecCccccccc-------------------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCC
Q 013220 255 CKVVDFGNACRANK-------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 315 (447)
Q Consensus 255 ~kL~Dfg~a~~~~~-------------------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~ 315 (447)
+|++|||++..... .....+||++|+|||++.+..|+.++|||||||++|+|++|..|+..
T Consensus 138 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~ 217 (793)
T PLN00181 138 TKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREE 217 (793)
T ss_pred ccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence 89999999864211 00113578999999999998999999999999999999998877642
Q ss_pred CCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhc
Q 013220 316 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPL 395 (447)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 395 (447)
. ...+..+... ..+.. ... ......+++.+|
T Consensus 218 ~--------~~~~~~~~~~--~~~~~--------------------------------------~~~-~~~~~~~~~~~~ 248 (793)
T PLN00181 218 K--------SRTMSSLRHR--VLPPQ--------------------------------------ILL-NWPKEASFCLWL 248 (793)
T ss_pred H--------HHHHHHHHHh--hcChh--------------------------------------hhh-cCHHHHHHHHHh
Confidence 1 0111111000 00000 000 122355888999
Q ss_pred cccCCCCCCChHHHhcCcccccc
Q 013220 396 LDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 396 L~~dP~kRpta~elL~hp~f~~~ 418 (447)
|++||.+|||+.|+|+||||...
T Consensus 249 L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 249 LHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCCChhhCcChHHHhhchhhhhh
Confidence 99999999999999999999864
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=6.5e-25 Score=204.14 Aligned_cols=194 Identities=35% Similarity=0.532 Sum_probs=164.1
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
|.+.+.||.|++|+||++.+..+++.+|+|.+..... ....+.+|++.++.+ .|++++++++.+... .
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~------~~~~i~~~~~~~~~~----~ 70 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL------KHPNIVKLYGVFEDP----E 70 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC------CCCChhhheeeeecC----C
Confidence 6778999999999999999988899999998775432 466888899999999 788899999987643 6
Q ss_pred eEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
..+++||++ +++|.+.+..... .+++..+..++.+++.++.+||+. +++|+|++|.||+++
T Consensus 71 ~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~---------------- 132 (225)
T smart00221 71 PLYLVMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLG---------------- 132 (225)
T ss_pred ceEEEEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEc----------------
Confidence 899999999 6699888865431 178889999999999999999996 999999999999993
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc----
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---- 270 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~---- 270 (447)
....++|+|||.+.......
T Consensus 133 --------------------------------------------------------~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 133 --------------------------------------------------------MDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred --------------------------------------------------------CCCCEEEeeCceeeEecCcccccc
Confidence 34679999999987655432
Q ss_pred ccCCCCCCccChHHh-hcCCCCccchhHhHHHHHHHHhhCCCCCCC
Q 013220 271 AEEIQTRQYRAPEVI-LRAGYSFSVDMWSFACTAFELATGDMLFAP 315 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l-~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~ 315 (447)
....++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 445678899999998 556778899999999999999999999965
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=8.4e-25 Score=197.28 Aligned_cols=169 Identities=23% Similarity=0.301 Sum_probs=123.6
Q ss_pred ccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCC
Q 013220 126 DSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSING 205 (447)
Q Consensus 126 ~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (447)
|+|.+++... ...+++..+..++.|++.||+|||++ + ||+||++.
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~--------------------------- 45 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLT--------------------------- 45 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEc---------------------------
Confidence 5677777643 34699999999999999999999996 6 99999993
Q ss_pred CCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccCCCCCCccChHHh
Q 013220 206 GSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVI 285 (447)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~l 285 (447)
.+..+++ ||.+...... ...|++.|+|||++
T Consensus 46 ---------------------------------------------~~~~~~~--fG~~~~~~~~--~~~g~~~y~aPE~~ 76 (176)
T smart00750 46 ---------------------------------------------WDGLLKL--DGSVAFKTPE--QSRVDPYFMAPEVI 76 (176)
T ss_pred ---------------------------------------------Cccceee--ccceEeeccc--cCCCcccccChHHh
Confidence 3456777 9988654432 23689999999999
Q ss_pred hcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhc
Q 013220 286 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL 365 (447)
Q Consensus 286 ~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (447)
.+..++.++|||||||++|+|++|..||..... ....+..+... .+...
T Consensus 77 ~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~---~~~~~----------------------- 125 (176)
T smart00750 77 QGQSYTEKADIYSLGITLYEALDYELPYNEERE-----LSAILEILLNG---MPADD----------------------- 125 (176)
T ss_pred cCCCCcchhhHHHHHHHHHHHHhCCCCccccch-----hcHHHHHHHHH---hccCC-----------------------
Confidence 999999999999999999999999999965421 11111111111 00000
Q ss_pred ccCchhHHhhhhcCCChhhHH--HHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 366 KFWSLDRLLVDKYRFSETDAR--EFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~--~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
......+...+. .+.+||.+||..||++|||+.|+++|+|+...
T Consensus 126 ---------~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 126 ---------PRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ---------ccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 000001122233 68999999999999999999999999998753
No 405
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=1.9e-25 Score=236.65 Aligned_cols=270 Identities=21% Similarity=0.290 Sum_probs=194.5
Q ss_pred Cce-EEEEeecccCceEEEEEEeCCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRY-IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y-~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
..| ...+.+|.|++|.|+.+........++.|..+.. ......+.. .+...+--.....|++++..+..+.+.
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~--~i~sE~~i~~~l~h~~~~e~l~~~~~~- 393 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNY--NITSEFCIGSSLSHPNIIETLDIVQEI- 393 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhh--hhhhheeecccccCCchhhhHHHHhhc-
Confidence 445 5677889999999999887777777777754311 011111111 133333333444889988888777654
Q ss_pred CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 112 PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 112 ~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
....-+||||..+|+.++.+. ..+...++..++.|++.|++|+|.. ||.|||+||+|+++.
T Consensus 394 ---~~~~~~mE~~~~Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~------------- 454 (601)
T KOG0590|consen 394 ---DGILQSMEYCPYDLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVT------------- 454 (601)
T ss_pred ---ccchhhhhcccHHHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEe-------------
Confidence 334444999955999998865 2377888999999999999999995 999999999999993
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc---
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--- 268 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~--- 268 (447)
..+.+|++|||.+.....
T Consensus 455 -----------------------------------------------------------~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 455 -----------------------------------------------------------ENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred -----------------------------------------------------------cCCceEEeecCcceeeccCcc
Confidence 356899999998853321
Q ss_pred ----ccccCCCCCCccChHHhhcCCCC-ccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhh
Q 013220 269 ----QFAEEIQTRQYRAPEVILRAGYS-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA 343 (447)
Q Consensus 269 ----~~~~~~gt~~y~aPE~l~~~~~~-~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (447)
.....+|+..|+|||.+.+..|. ..+||||.|+++++|++|++||......... . .
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~----~----~----------- 536 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS----F----K----------- 536 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc----h----h-----------
Confidence 23345899999999999999986 6799999999999999999999766422110 0 0
Q ss_pred hCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCCcc
Q 013220 344 IGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 423 (447)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~~~ 423 (447)
...+.....+......+...++.+.+.+|.+||++||++|+|+++|++.+||+....+..
T Consensus 537 --------------------~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c~v 596 (601)
T KOG0590|consen 537 --------------------TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECCHV 596 (601)
T ss_pred --------------------hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceEEe
Confidence 000011111222222344556788999999999999999999999999999999988776
Q ss_pred cc
Q 013220 424 ET 425 (447)
Q Consensus 424 ~~ 425 (447)
+.
T Consensus 597 ~~ 598 (601)
T KOG0590|consen 597 DP 598 (601)
T ss_pred cc
Confidence 53
No 406
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=7.3e-24 Score=192.83 Aligned_cols=207 Identities=23% Similarity=0.331 Sum_probs=168.6
Q ss_pred CccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 30 GDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 30 g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
.+++-+++|+++++||+|+||.+|+|.....|+.||||+-..++. -..+..|.++.+.|++.- +-|+| .-+..
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~g~--GiP~i---~~y~~- 81 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQGGV--GIPHI---RHYGT- 81 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhccCC--CCchh---hhhcc-
Confidence 345556899999999999999999999999999999999877665 345778999999998654 33333 33322
Q ss_pred cCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 110 AGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
++++-.+||+.+|.+|.+++.-.. +.++.+++.-++.||+.-++|+|.+ +.|||||||+|+|.+..
T Consensus 82 ---e~~ynvlVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlg--------- 147 (341)
T KOG1163|consen 82 ---EKDYNVLVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLG--------- 147 (341)
T ss_pred ---ccccceeeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccc---------
Confidence 567899999999999999886544 4589999999999999999999997 99999999999999542
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ 269 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~ 269 (447)
..-..+.|+|||+|+..-+.
T Consensus 148 ------------------------------------------------------------rh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 148 ------------------------------------------------------------RHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred ------------------------------------------------------------cccceEEEEeccchhhhccc
Confidence 12345899999999865433
Q ss_pred c----------ccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCC
Q 013220 270 F----------AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKS 317 (447)
Q Consensus 270 ~----------~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~ 317 (447)
. ....||-.|.+-....+...+..-|+=|+|.++.+...|..||.+..
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 2 22368999999888777777889999999999999999999998763
No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-24 Score=208.70 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=184.5
Q ss_pred CCceEEEEeecccCceEEEEEEeCCC-----CeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRT-----SSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
..|+++...+-+|+||.||.|.++.. .+.|.+|..+..+ .....+..|.-++..+ .|+|+..+.++.
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~------sH~nll~V~~V~ 356 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA------SHPNLLSVLGVS 356 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC------cCCCccceeEEE
Confidence 47799999999999999999965532 2344555443332 2233445555555555 789999888887
Q ss_pred cccCCCcceEEEEEecc-cccHHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeec
Q 013220 108 KHAGPNGQHLCMVLEFL-GDSLLRLIKYSRY------KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVST 180 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~------~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~ 180 (447)
.. ......+++.++ .+.|..++.-.+. +.+.--++..++.|+..|++|||+. |+||.||-.+|+++
T Consensus 357 ie---~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvI--- 429 (563)
T KOG1024|consen 357 IE---DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVI--- 429 (563)
T ss_pred ee---ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-Ccccchhhhhccee---
Confidence 65 346778888999 6778888763321 2244556778899999999999997 99999999999999
Q ss_pred CCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeec
Q 013220 181 IDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDF 260 (447)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Df 260 (447)
+...++||+|-
T Consensus 430 ---------------------------------------------------------------------dd~LqVkltDs 440 (563)
T KOG1024|consen 430 ---------------------------------------------------------------------DDQLQVKLTDS 440 (563)
T ss_pred ---------------------------------------------------------------------hhheeEEeccc
Confidence 44688999999
Q ss_pred CcccccccccccCCC-----CCCccChHHhhcCCCCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHHHH
Q 013220 261 GNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMEL 334 (447)
Q Consensus 261 g~a~~~~~~~~~~~g-----t~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 334 (447)
.++.-.-.......| +..|||||.+....|+.++|+|||||+||+|++ |+.||..-+. .++.
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP-------fEm~----- 508 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP-------FEME----- 508 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH-------HHHH-----
Confidence 998654444444444 578999999999999999999999999999997 8999976642 2222
Q ss_pred hCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhc--CCChhhHHHHHHHHhhccccCCCCCCChHHHhc
Q 013220 335 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKY--RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 411 (447)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~ 411 (447)
.++.+.+ .-|-++++++..++.-||...|++||+.+|+..
T Consensus 509 -------------------------------------~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 509 -------------------------------------HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred -------------------------------------HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 2222222 245578999999999999999999999999874
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=2.4e-23 Score=197.21 Aligned_cols=203 Identities=21% Similarity=0.318 Sum_probs=169.2
Q ss_pred CCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
|-.|++.++||+|+||.++.|.+..+++.||||+-....+ .-++..|.+..+.|.+. ++|...|= .++.|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-APQLrdEYr~YKlL~g~-----~GIP~vYY----FGqeG 96 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-APQLRDEYRTYKLLGGT-----EGIPQVYY----FGQEG 96 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC-cchHHHHHHHHHHHcCC-----CCCCceee----ecccc
Confidence 5789999999999999999999999999999997543332 45788899999999743 44443332 23467
Q ss_pred ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
.+-.||||.+|.+|.+++..+. +.|+.+++.-++.||+.-++++|++ .+|.|||||+|+||+...+
T Consensus 97 ~~NiLVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~------------ 162 (449)
T KOG1165|consen 97 KYNILVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGT------------ 162 (449)
T ss_pred chhhhhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCC------------
Confidence 8999999999999999998764 4699999999999999999999998 9999999999999966321
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccC-
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE- 273 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~- 273 (447)
.....+.++|||+|+.+-++.++.
T Consensus 163 -------------------------------------------------------k~~n~IhiiDFGmAK~YrDp~TkqH 187 (449)
T KOG1165|consen 163 -------------------------------------------------------KDANVIHIIDFGMAKEYRDPKTKQH 187 (449)
T ss_pred -------------------------------------------------------CCCceEEEEeccchhhhcCcccccc
Confidence 223458999999998766554432
Q ss_pred ---------CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCC
Q 013220 274 ---------IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPK 316 (447)
Q Consensus 274 ---------~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~ 316 (447)
.||-.||+-....+...+..-|+=|||=++.+.+.|.+||.+.
T Consensus 188 IPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 188 IPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred CccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 5899999999888988999999999999999999999999876
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=3.5e-22 Score=198.41 Aligned_cols=207 Identities=26% Similarity=0.286 Sum_probs=167.0
Q ss_pred ceEEEEeecccCceEEEEEEeCCCC-eEEEEEEechhHHh-HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTS-SYVALKIQKSAAQF-AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~-~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
+|++.++||+|+||.||++.+..++ ..+|+|+....... ...+..|..++..+.... ...++..+++... ...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~--~~~~~~~~~~~G~---~~~ 93 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKN--GPSHFPKLLDHGR---STE 93 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhc--CCCCCCEEEEecc---CCC
Confidence 8999999999999999999987774 78999987664322 226888999999997511 3356777777664 145
Q ss_pred ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
.+-++||+.+|.+|.++......+.++..++..++.|++.+|+++|+. |++||||||+|+++....
T Consensus 94 ~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~------------- 159 (322)
T KOG1164|consen 94 DFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSS------------- 159 (322)
T ss_pred ceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCC-------------
Confidence 689999999999999988665556799999999999999999999996 999999999999995420
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc--cccc----
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC--RANK---- 268 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~--~~~~---- 268 (447)
......+.|.|||++. ....
T Consensus 160 ------------------------------------------------------~~~~~~~~llDfGlar~~~~~~~~~~ 185 (322)
T KOG1164|consen 160 ------------------------------------------------------RSEVRTLYLLDFGLARRFKYVGDSGG 185 (322)
T ss_pred ------------------------------------------------------CcccceEEEEecCCCccccccCCCCc
Confidence 0112468999999997 3210
Q ss_pred ----c---cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCC
Q 013220 269 ----Q---FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPK 316 (447)
Q Consensus 269 ----~---~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~ 316 (447)
+ ...+.||..|.++....+...+.+.|+||++.++.+++.|..||...
T Consensus 186 ~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~ 240 (322)
T KOG1164|consen 186 NLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEAL 240 (322)
T ss_pred ccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence 1 12345999999999999999999999999999999999999999665
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=8.7e-21 Score=183.32 Aligned_cols=265 Identities=32% Similarity=0.428 Sum_probs=195.2
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHHHHHHHHHHHHHhhcCCCCCcc-eeeeecccccccCC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQAALHEIEVLSAVADGDPSNEK-CVIRLIDHFKHAGP 112 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~-~Iv~~~~~~~~~~~ 112 (447)
|.+.+.||.|+|+.||++.+. ..+++|.+..... ....+.+|+.+++.+. |+ +|+++++.+...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~------~~~~i~~~~~~~~~~-- 70 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN------HPPNIVKLYDFFQDE-- 70 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc------CCcceeeEEEEEecC--
Confidence 788999999999999999887 7889998766543 3567888999999984 44 799999998532
Q ss_pred CcceEEEEEecc-cccHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRY-KGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
...+++++++ ++.+.+++..... ..+.......++.|++.+++++|+. +++|||+||+||++..
T Consensus 71 --~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~----------- 136 (384)
T COG0515 71 --GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDR----------- 136 (384)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecC-----------
Confidence 4589999999 7788866554321 1588999999999999999999996 9999999999999933
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc-ceeEeecCccccccc-
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANK- 268 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kL~Dfg~a~~~~~- 268 (447)
.. .++++|||.+.....
T Consensus 137 -------------------------------------------------------------~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 137 -------------------------------------------------------------DGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred -------------------------------------------------------------CCCeEEEeccCcceecCCC
Confidence 33 689999999864332
Q ss_pred --------ccccCCCCCCccChHHhhc---CCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCC
Q 013220 269 --------QFAEEIQTRQYRAPEVILR---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK 337 (447)
Q Consensus 269 --------~~~~~~gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~ 337 (447)
.....+|+..|+|||.+.+ ..+....|+||+|+++++++.|..||...... ...............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~ 232 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPT 232 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCC
Confidence 2345688999999999987 56789999999999999999999997655311 001111111111111
Q ss_pred C--CHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccc
Q 013220 338 M--PRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 415 (447)
Q Consensus 338 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f 415 (447)
. .... ... ........+.+++.+++..+|..|.+..+...++|.
T Consensus 233 ~~~~~~~--------------------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 278 (384)
T COG0515 233 PSLASPL--------------------------------SPS--NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL 278 (384)
T ss_pred ccccccc--------------------------------Ccc--ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHh
Confidence 0 0000 000 001223578899999999999999999999999877
Q ss_pred ccccCCcccc
Q 013220 416 SLRNSTRDET 425 (447)
Q Consensus 416 ~~~~~~~~~~ 425 (447)
..........
T Consensus 279 ~~~~~~~~~~ 288 (384)
T COG0515 279 AHLKLKESDL 288 (384)
T ss_pred hCcccccccc
Confidence 7655444433
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=4.5e-21 Score=191.67 Aligned_cols=119 Identities=26% Similarity=0.285 Sum_probs=93.4
Q ss_pred CCceEEEEeecccCceEEEEEEeCC-CCeEEEEEEechh------HHhHHHHHHHHHHHHHhhcCCCCCcceeee-eccc
Q 013220 35 GGRYIAQRKLGWGQFSIVWLAYDTR-TSSYVALKIQKSA------AQFAQAALHEIEVLSAVADGDPSNEKCVIR-LIDH 106 (447)
Q Consensus 35 ~~~y~l~~~lG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~-~~~~ 106 (447)
.++|.+.+.||+|+||+||+|++.. ++..||||..... ......+.+|+++|+.+ .|++|+. ++..
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L------~h~~iv~~l~~~ 90 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV------RGIGVVPQLLAT 90 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc------cCCCCCcEEEEc
Confidence 3789999999999999999998876 6788899975422 22355789999999999 6667764 4331
Q ss_pred ccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccC-CCCCeEe
Q 013220 107 FKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDL-KPENILL 177 (447)
Q Consensus 107 ~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Di-kp~Nill 177 (447)
...|+||||+ |++|.. .. . .. ...++.|++.||+|||+. ||+|||| ||+|||+
T Consensus 91 --------~~~~LVmE~~~G~~L~~-~~--~---~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv 145 (365)
T PRK09188 91 --------GKDGLVRGWTEGVPLHL-AR--P---HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLM 145 (365)
T ss_pred --------CCcEEEEEccCCCCHHH-hC--c---cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEE
Confidence 2479999999 777752 21 1 11 146789999999999996 9999999 9999999
No 412
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=2e-19 Score=172.99 Aligned_cols=208 Identities=24% Similarity=0.335 Sum_probs=129.7
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH----HhHHHHHHHHHHHHHhhc-CCCC---Ccc------eeee
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA----QFAQAALHEIEVLSAVAD-GDPS---NEK------CVIR 102 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~-~~~~---~~~------~Iv~ 102 (447)
.+...+.||.|+++.||.+++..+++.+|+|+..... ...+.+.+|.-....+.+ .+.. .|- .+++
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3567778999999999999999999999999754332 223344444433333211 0000 011 1222
Q ss_pred ecc--cccccCCCcc-----eEEEEEecccccHHHHHHhhc---cCC--CCHHHHHHHHHHHHHHHHHHHhhCCcccccC
Q 013220 103 LID--HFKHAGPNGQ-----HLCMVLEFLGDSLLRLIKYSR---YKG--LELNKVREICKYILTGLDYLHRELGIIHTDL 170 (447)
Q Consensus 103 ~~~--~~~~~~~~~~-----~~~lvmE~~~~~L~~~~~~~~---~~~--l~~~~~~~i~~qil~aL~~lH~~~gIiH~Di 170 (447)
+-+ .+....+... ..+++|+-+.++|..++..-. ... ........+..|++..+++||.. |++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEeccc
Confidence 221 1111111111 247888988888887764311 110 11222344558999999999996 9999999
Q ss_pred CCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCC
Q 013220 171 KPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG 250 (447)
Q Consensus 171 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (447)
+|+|+++ +
T Consensus 172 ~~~nfll------------------------------------------------------------------------~ 179 (288)
T PF14531_consen 172 KPENFLL------------------------------------------------------------------------D 179 (288)
T ss_dssp SGGGEEE-------------------------------------------------------------------------
T ss_pred ceeeEEE------------------------------------------------------------------------c
Confidence 9999999 5
Q ss_pred cccceeEeecCcccccccccccCCCCCCccChHHhhcC--------CCCccchhHhHHHHHHHHhhCCCCCCCCC
Q 013220 251 IDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA--------GYSFSVDMWSFACTAFELATGDMLFAPKS 317 (447)
Q Consensus 251 ~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~l~~~--------~~~~~~DiwSlGvil~~l~~g~~Pf~~~~ 317 (447)
.++.+.|+||+.....+........+..|.+||..... .++.+.|.|+||+++|.|..+..||....
T Consensus 180 ~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~ 254 (288)
T PF14531_consen 180 QDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSS 254 (288)
T ss_dssp TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCG
T ss_pred CCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCC
Confidence 57899999998887665544334456789999987542 47899999999999999999999997653
No 413
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=4.4e-20 Score=200.21 Aligned_cols=201 Identities=22% Similarity=0.346 Sum_probs=158.0
Q ss_pred ccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 33 FNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 33 ~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++|..|.+.++||.|+||+||+|.+.+ ++.||+|+.+...- -+|+--.+++.+|. +.-.+.|+.+..++...
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~--WEfYI~~q~~~RLk---~~~~~~~~~~~~a~~~~-- 766 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP--WEFYICLQVMERLK---PQMLPSIMHISSAHVFQ-- 766 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc--eeeeehHHHHHhhc---hhhhcchHHHHHHHccC--
Confidence 346789999999999999999999877 99999998765432 23333445555554 11234566666666543
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~ 191 (447)
+-.++|+||. -|+|.+++... +.+++..+..+..||+.-++.||.. +||||||||+|+|+......+
T Consensus 767 --~~S~lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~------- 834 (974)
T KOG1166|consen 767 --NASVLVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICAD------- 834 (974)
T ss_pred --CcceeeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCC-------
Confidence 5689999999 89999999844 5599999999999999999999995 999999999999995532111
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc----
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---- 267 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---- 267 (447)
.....++|+|||.+.-+.
T Consensus 835 ----------------------------------------------------------~~~~~l~lIDfG~siDm~lfp~ 856 (974)
T KOG1166|consen 835 ----------------------------------------------------------SDSKGLYLIDFGRSIDMKLFPD 856 (974)
T ss_pred ----------------------------------------------------------CcccceEEEecccceeeeEcCC
Confidence 114568999999996432
Q ss_pred -cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCC
Q 013220 268 -KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 311 (447)
Q Consensus 268 -~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~ 311 (447)
..+...++|-.|-.+|+..|.+++..+|.|.|+.+++.|++|++
T Consensus 857 ~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 857 GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 23444578999999999999999999999999999999999964
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=9.7e-21 Score=202.12 Aligned_cols=244 Identities=21% Similarity=0.257 Sum_probs=175.2
Q ss_pred ceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCc
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNG 114 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~ 114 (447)
.|...+-||++.|=.|.+|++.. ..|+||++-... ...+.+.++++-++.. +..+||++++.-... +.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e--G~vVvKVFvk~~p~~sL~~~~qrL~~ik~~----l~~~pn~lPfqk~~~----t~ 93 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE--GLVVVKVFVKQDPTISLRPFKQRLEEIKFA----LMKAPNCLPFQKVLV----TD 93 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC--ceEEEEEEeccCCCCCchHHHHHHHHHHHH----hhcCCcccchHHHHH----hh
Confidence 68899999999999999997753 348999765443 3456666666655532 128899998887755 34
Q ss_pred ceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCC
Q 013220 115 QHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTP 194 (447)
Q Consensus 115 ~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~ 194 (447)
...|||-+|+-..|++-+..... +..-+.++|+.|++.||.-+|.. ||+|||||.+|||++.
T Consensus 94 kAAylvRqyvkhnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTS--------------- 155 (1431)
T KOG1240|consen 94 KAAYLVRQYVKHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITS--------------- 155 (1431)
T ss_pred HHHHHHHHHHhhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEee---------------
Confidence 68899999999999998876544 67788899999999999999996 9999999999999944
Q ss_pred CcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccc----ccc-
Q 013220 195 ILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA----NKQ- 269 (447)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~----~~~- 269 (447)
..-+.|+||..-++. +.+
T Consensus 156 ---------------------------------------------------------WNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 156 ---------------------------------------------------------WNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred ---------------------------------------------------------echhhhhcccccCCccCCCCCcc
Confidence 344778888755432 111
Q ss_pred -cccCCCC----CCccChHHhhcC----------C-CCccchhHhHHHHHHHHhh-CCCCCCCCCCCCCCCchHHHHHHH
Q 013220 270 -FAEEIQT----RQYRAPEVILRA----------G-YSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMM 332 (447)
Q Consensus 270 -~~~~~gt----~~y~aPE~l~~~----------~-~~~~~DiwSlGvil~~l~~-g~~Pf~~~~~~~~~~~~~~~~~~~ 332 (447)
.+.+..| ..|.|||.+... + .+++.||||+||+++||++ |+.||.- .++.
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-------------SQL~ 245 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-------------SQLL 245 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-------------HHHH
Confidence 1111222 469999998531 2 5789999999999999987 6777732 1222
Q ss_pred HHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcC
Q 013220 333 ELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 412 (447)
Q Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~h 412 (447)
+ ++.......+..+.+-. ...++.||..|++.||.+|.+|++.|+-
T Consensus 246 a----------------------------Yr~~~~~~~e~~Le~Ie------d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 246 A----------------------------YRSGNADDPEQLLEKIE------DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred h----------------------------HhccCccCHHHHHHhCc------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1 11111111222222211 2368899999999999999999999976
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=3.9e-21 Score=196.22 Aligned_cols=239 Identities=28% Similarity=0.394 Sum_probs=191.5
Q ss_pred ecccCceEEEEEEeC---CCCeEEEEEEechhHH---hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 44 LGWGQFSIVWLAYDT---RTSSYVALKIQKSAAQ---FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
+|.|+||.|++++.. ..+..+|.|++++... .......|-.++...+ +|+.++++.-+|... ..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-----~~~f~v~lhyafqt~----~kl 72 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-----NTPFLVKLHYAFQTD----GKL 72 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-----CCCceeeeeeeeccc----cch
Confidence 689999999998533 3477889998765431 1124555777777775 689999999888854 679
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
+++++|. +++++....... .+.+.....+...++.|++++|+- +|+|||+|++||++
T Consensus 73 ~l~ld~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enill------------------- 130 (612)
T KOG0603|consen 73 YLILDFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLL------------------- 130 (612)
T ss_pred hHhhhhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceee-------------------
Confidence 9999999 778876665433 377778888889999999999995 99999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccccCCCC
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT 276 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~gt 276 (447)
+..+.+++.|||.++........ |||
T Consensus 131 -----------------------------------------------------d~~Ghi~~tdfglske~v~~~~~-cgt 156 (612)
T KOG0603|consen 131 -----------------------------------------------------LLEGHIKLTDFGLSKEAVKEKIA-CGT 156 (612)
T ss_pred -----------------------------------------------------cccCccccCCchhhhHhHhhhhc-ccc
Confidence 55788999999999765444333 999
Q ss_pred CCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhccc
Q 013220 277 RQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 356 (447)
Q Consensus 277 ~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 356 (447)
..|||||++. ....++|.||+|+++++|++|..||... .
T Consensus 157 ~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~----------~----------------------------- 195 (612)
T KOG0603|consen 157 YEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD----------T----------------------------- 195 (612)
T ss_pred hhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH----------H-----------------------------
Confidence 9999999998 5678999999999999999999999641 1
Q ss_pred chhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCC-----hHHHhcCcccccccCC
Q 013220 357 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNST 421 (447)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpt-----a~elL~hp~f~~~~~~ 421 (447)
...|+.....+|+..+..+.+++..++..+|..|.- +.++++|+||..+.-.
T Consensus 196 -------------~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 196 -------------MKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred -------------HHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 233444456678888999999999999999999975 4899999999987644
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=8.3e-20 Score=170.67 Aligned_cols=131 Identities=16% Similarity=0.180 Sum_probs=96.9
Q ss_pred ccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH----hHH------HHHHHHHHHHHhhcCCCCCc
Q 013220 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ----FAQ------AALHEIEVLSAVADGDPSNE 97 (447)
Q Consensus 28 ~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----~~~------~~~~E~~~l~~l~~~~~~~~ 97 (447)
..-+.+. ++|++.+.||.|+||.||++.+ ++..+|+|++..... ... .+.+|++.+.++ .|
T Consensus 24 ~~~~~l~-~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL------~~ 94 (232)
T PRK10359 24 IFDDFLS-YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV------RS 94 (232)
T ss_pred HHHHHhh-CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH------HH
Confidence 3344554 8999999999999999999755 466899999864321 111 157888899999 56
Q ss_pred ceeeeecccccccCCC----cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCC
Q 013220 98 KCVIRLIDHFKHAGPN----GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKP 172 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~~~----~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp 172 (447)
++|....+++...... ....+++|||+ |.+|.+... +++ ....+++.+|..+|+. |++|||+||
T Consensus 95 ~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~-gi~H~Dikp 163 (232)
T PRK10359 95 EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH-GMVSGDPHK 163 (232)
T ss_pred CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc-CCccCCCCh
Confidence 6777777765543111 23589999999 667866521 332 3456899999999996 999999999
Q ss_pred CCeEee
Q 013220 173 ENILLV 178 (447)
Q Consensus 173 ~Nill~ 178 (447)
.||++.
T Consensus 164 ~Nili~ 169 (232)
T PRK10359 164 GNFIVS 169 (232)
T ss_pred HHEEEe
Confidence 999993
No 417
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=4.4e-20 Score=170.84 Aligned_cols=243 Identities=16% Similarity=0.249 Sum_probs=181.4
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
++..++-+|.+...|..|+|++. |..+++|+++.+. +..+.|+.|.-.|+.+ .||||+.+++++...
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrif------shpnilpvlgacnsp-- 259 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIF------SHPNILPVLGACNSP-- 259 (448)
T ss_pred hhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeee------cCCchhhhhhhccCC--
Confidence 34567788999999999999885 4456678776554 4566899999999988 899999999998865
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc-cCCCCCeEeeecCCCCCCcccC
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHT-DLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~-Dikp~Nill~~~~~~~~~~~~~ 190 (447)
..+.++..|| -++|++++.....-..+..++..++..++.|++|||+--.++-| -++...+++...
T Consensus 260 --pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmided---------- 327 (448)
T KOG0195|consen 260 --PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDED---------- 327 (448)
T ss_pred --CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecch----------
Confidence 6799999999 88999998655444467788999999999999999983244443 677888888442
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
-..++..+|--++...
T Consensus 328 ------------------------------------------------------------ltarismad~kfsfqe---- 343 (448)
T KOG0195|consen 328 ------------------------------------------------------------LTARISMADTKFSFQE---- 343 (448)
T ss_pred ------------------------------------------------------------hhhheecccceeeeec----
Confidence 1223334444443221
Q ss_pred ccCCCCCCccChHHhhcCCCC---ccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCC
Q 013220 271 AEEIQTRQYRAPEVILRAGYS---FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 347 (447)
Q Consensus 271 ~~~~gt~~y~aPE~l~~~~~~---~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (447)
....-.+.|++||.+.+++-+ .++|+|||++++++|.+...||.+.+.- ...+...+-|.
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm-------ecgmkialegl---------- 406 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM-------ECGMKIALEGL---------- 406 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch-------hhhhhhhhccc----------
Confidence 223347899999999987643 6899999999999999999999876421 11111222111
Q ss_pred CccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHh
Q 013220 348 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 410 (447)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL 410 (447)
+..+|+.++..+..|+.-|+..||.+||.++.++
T Consensus 407 -----------------------------rv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 407 -----------------------------RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -----------------------------cccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 3347888899999999999999999999988764
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=2.8e-19 Score=164.07 Aligned_cols=121 Identities=21% Similarity=0.185 Sum_probs=88.7
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHh---------------------------HHHHHHHHHHHHHhhcCC
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF---------------------------AQAALHEIEVLSAVADGD 93 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~ 93 (447)
.+.||+|++|.||+|.+. +|+.||+|+++..... ......|++++..+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999986 8999999998654210 012234999999996543
Q ss_pred CCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH-HhhCCcccccCC
Q 013220 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL-HRELGIIHTDLK 171 (447)
Q Consensus 94 ~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~l-H~~~gIiH~Dik 171 (447)
. .+|.++. . ...+|||||+ |+++...... ...++...+..++.|++.+|+++ |+. ||+|||||
T Consensus 81 v-~~p~~~~-----~------~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDlk 145 (190)
T cd05147 81 I-PCPEPIL-----L------KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDC-RLVHADLS 145 (190)
T ss_pred C-CCCcEEE-----e------cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCCC
Confidence 2 2233321 1 1237999999 4444433222 24588999999999999999999 685 99999999
Q ss_pred CCCeEe
Q 013220 172 PENILL 177 (447)
Q Consensus 172 p~Nill 177 (447)
|+||++
T Consensus 146 P~NIli 151 (190)
T cd05147 146 EYNLLY 151 (190)
T ss_pred HHHEEE
Confidence 999999
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=2.5e-18 Score=157.76 Aligned_cols=121 Identities=21% Similarity=0.211 Sum_probs=88.0
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHH---------------------------hHHHHHHHHHHHHHhhcCC
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ---------------------------FAQAALHEIEVLSAVADGD 93 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~E~~~l~~l~~~~ 93 (447)
.+.||+|++|.||+|++. +|+.||||++..... ......+|.+.+..+.+.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~- 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA- 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 468999999999999987 899999998765321 012345788999998543
Q ss_pred CCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-hCCcccccCC
Q 013220 94 PSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR-ELGIIHTDLK 171 (447)
Q Consensus 94 ~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~gIiH~Dik 171 (447)
+|.....+.. ...++||||+ |+++....... ..++...+..++.|++.++.++|+ . ||+|||||
T Consensus 80 -----~i~~p~~~~~------~~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDlk 145 (190)
T cd05145 80 -----GVPVPEPILL------KKNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDLS 145 (190)
T ss_pred -----CCCCceEEEe------cCCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCC
Confidence 3321111111 1248999999 44343322221 347788999999999999999999 7 99999999
Q ss_pred CCCeEe
Q 013220 172 PENILL 177 (447)
Q Consensus 172 p~Nill 177 (447)
|+||++
T Consensus 146 P~NIll 151 (190)
T cd05145 146 EYNILY 151 (190)
T ss_pred hhhEEE
Confidence 999999
No 420
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.76 E-value=8.6e-19 Score=187.24 Aligned_cols=221 Identities=29% Similarity=0.424 Sum_probs=154.8
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
..|..++.|-.|+||-||+.+|+.+.+.||+|+-+.+-. .+. ++... +.+.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~li-----lRn--ilt~a------~npfvv-------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLI-----LRN--ILTFA------GNPFVV-------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccchh-----hhc--ccccc------CCccee--------------
Confidence 568999999999999999999999999999975543321 000 22222 222222
Q ss_pred eEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCC
Q 013220 116 HLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPI 195 (447)
Q Consensus 116 ~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~ 195 (447)
|++ ...++.- ..++. +++.|++|+|+. ||+|||+||+|.+|+.
T Consensus 136 ---------gDc-~tllk~~--g~lPv--------dmvla~Eylh~y-givhrdlkpdnllIT~---------------- 178 (1205)
T KOG0606|consen 136 ---------GDC-ATLLKNI--GPLPV--------DMVLAVEYLHSY-GIVHRDLKPDNLLITS---------------- 178 (1205)
T ss_pred ---------chh-hhhcccC--CCCcc--------hhhHHhHhhccC-CeecCCCCCCcceeee----------------
Confidence 111 1111110 11221 226789999995 9999999999999954
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccc--------
Q 013220 196 LERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-------- 267 (447)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~-------- 267 (447)
-+.+|+.|||+++...
T Consensus 179 --------------------------------------------------------mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 179 --------------------------------------------------------MGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred --------------------------------------------------------cccccccchhhhhhhhhhccchhh
Confidence 5779999999985321
Q ss_pred ----------cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCC
Q 013220 268 ----------KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK 337 (447)
Q Consensus 268 ----------~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~ 337 (447)
-.....+||+.|+|||++....|+..+|.|++|+|+|+.+-|++||.+.. .+......+.....
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt------peelfg~visd~i~ 276 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT------PEELFGQVISDDIE 276 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC------HHHHHhhhhhhhcc
Confidence 01233489999999999999999999999999999999999999998773 22222222222112
Q ss_pred CCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCC---ChHHHhcCcc
Q 013220 338 MPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP---TAQQCLQHPW 414 (447)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRp---ta~elL~hp~ 414 (447)
.|+. ....+.++.++|.++|+.+|..|. .+-++-+|+|
T Consensus 277 wpE~---------------------------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~f 317 (1205)
T KOG0606|consen 277 WPEE---------------------------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGF 317 (1205)
T ss_pred cccc---------------------------------------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccc
Confidence 1110 123467899999999999999996 4667779999
Q ss_pred cccccCC
Q 013220 415 LSLRNST 421 (447)
Q Consensus 415 f~~~~~~ 421 (447)
|+.-.-+
T Consensus 318 f~~LDw~ 324 (1205)
T KOG0606|consen 318 FQLLDWK 324 (1205)
T ss_pred eeecccc
Confidence 9976655
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=8.7e-18 Score=162.92 Aligned_cols=195 Identities=19% Similarity=0.213 Sum_probs=144.6
Q ss_pred CCCcceeeeecccccccCC-----------------------CcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHH
Q 013220 94 PSNEKCVIRLIDHFKHAGP-----------------------NGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICK 150 (447)
Q Consensus 94 ~~~~~~Iv~~~~~~~~~~~-----------------------~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~ 150 (447)
+..|||||++..+|.+.-+ .+..+|+||..+..+|..++... ..+-...+-++.
T Consensus 272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~---~~s~r~~~~~la 348 (598)
T KOG4158|consen 272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTR---HRSYRTGRVILA 348 (598)
T ss_pred cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcC---CCchHHHHHHHH
Confidence 4689999999999887432 23579999999999998887543 366677888999
Q ss_pred HHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhh
Q 013220 151 YILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANIS 230 (447)
Q Consensus 151 qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (447)
|+++|+.|||.+ ||.|||+|.+|||+...+
T Consensus 349 QlLEav~hL~~h-gvAhRDlKSDNiL~Eldd------------------------------------------------- 378 (598)
T KOG4158|consen 349 QLLEAVTHLHKH-GVAHRDLKSDNILLELDD------------------------------------------------- 378 (598)
T ss_pred HHHHHHHHHHHc-cchhhcccccceEEEecC-------------------------------------------------
Confidence 999999999997 999999999999995431
Q ss_pred hhhcccCCCCCCCCCccCCCcccceeEeecCcccccc---------cccccCCCCCCccChHHhhcCC-----C-Cccch
Q 013220 231 IRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---------KQFAEEIQTRQYRAPEVILRAG-----Y-SFSVD 295 (447)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~---------~~~~~~~gt~~y~aPE~l~~~~-----~-~~~~D 295 (447)
+.-..+.++|||.+.-.+ ......-|.-..+|||+...-+ . -.++|
T Consensus 379 -------------------D~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD 439 (598)
T KOG4158|consen 379 -------------------DEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKAD 439 (598)
T ss_pred -------------------CCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhh
Confidence 333457889999884322 1122234677889999986432 1 25899
Q ss_pred hHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhh
Q 013220 296 MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLV 375 (447)
Q Consensus 296 iwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (447)
.|+.|.+.|+++....||+..-+ +-- ....+..
T Consensus 440 ~WA~GalaYEIfg~~NPFY~rGe-------------------m~L----------------------------~~r~Yqe 472 (598)
T KOG4158|consen 440 TWAAGALAYEIFGRSNPFYKRGE-------------------MLL----------------------------DTRTYQE 472 (598)
T ss_pred hhhhhhhHHHHhccCCcccccch-------------------hee----------------------------chhhhhh
Confidence 99999999999999999986310 000 0001111
Q ss_pred h-hcCCChhhHHHHHHHHhhccccCCCCCCChH
Q 013220 376 D-KYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 407 (447)
Q Consensus 376 ~-~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~ 407 (447)
. -+.+++.++..+++++..+|+.||.||+++.
T Consensus 473 ~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 473 SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred hhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 1 1236677888999999999999999999853
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=3.8e-17 Score=151.84 Aligned_cols=129 Identities=18% Similarity=0.204 Sum_probs=99.7
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechh-HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
.+.||+|+||.||. +..++.. +||+.... ....+.+.+|+++++.+.+.. ..|+||+++++++......+..+.+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~-~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRL-IDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccC-CCCcccceeeEEEEeCCCCeEEEEE
Confidence 45799999999996 6666555 69976643 223467899999999997643 4799999999999875433444568
Q ss_pred EEecc---cccHHHHHHhhccCCCCHHHHHHHHHHHHHHH-HHHHhhCCcccccCCCCCeEeee
Q 013220 120 VLEFL---GDSLLRLIKYSRYKGLELNKVREICKYILTGL-DYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 120 vmE~~---~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL-~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
||||+ +++|.+++... .+++. ..++.|++.++ +|||++ +|+||||||+|||+..
T Consensus 83 I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~ 140 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQR 140 (210)
T ss_pred EecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEec
Confidence 99995 47999999643 25554 35678888877 899997 9999999999999954
No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=1.1e-16 Score=146.89 Aligned_cols=182 Identities=18% Similarity=0.136 Sum_probs=131.5
Q ss_pred EEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHH-----HHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQ-----AALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 39 ~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~-----~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
-+...|+.|+||+||++.. .+..++.+.+.......+ .+.+|+++|+.+. ++++|.++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~-----~~~~vP~ll~~------- 70 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLD-----GLPRTPRLLHW------- 70 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcC-----CCCCCCEEEEE-------
Confidence 3567899999999998854 678888887776655444 5788999999996 34556666553
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccC-CCCCeEeeecCCCCCCcccCC
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDL-KPENILLVSTIDPSKDPIRSG 191 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Di-kp~Nill~~~~~~~~~~~~~~ 191 (447)
...+++|||+ |.+|..... .. ...++.|++.+|+++|+. ||+|||| ||.|||++
T Consensus 71 -~~~~lvmeyI~G~~L~~~~~--------~~-~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~------------- 126 (218)
T PRK12274 71 -DGRHLDRSYLAGAAMYQRPP--------RG-DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQ------------- 126 (218)
T ss_pred -cCEEEEEeeecCccHHhhhh--------hh-hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEc-------------
Confidence 2368999999 777754321 11 135788999999999996 9999999 79999993
Q ss_pred CCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCcccccccccc
Q 013220 192 LTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 271 (447)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~~ 271 (447)
.++.++|+|||++........
T Consensus 127 -----------------------------------------------------------~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 127 -----------------------------------------------------------EDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred -----------------------------------------------------------CCCCEEEEECCCceecCCcch
Confidence 345799999999974332110
Q ss_pred ----------------cCCCCCCccChHHhhcC-CCC-ccchhHhHHHHHHHHhhCCCCCCCCC
Q 013220 272 ----------------EEIQTRQYRAPEVILRA-GYS-FSVDMWSFACTAFELATGDMLFAPKS 317 (447)
Q Consensus 272 ----------------~~~gt~~y~aPE~l~~~-~~~-~~~DiwSlGvil~~l~~g~~Pf~~~~ 317 (447)
..-.++.+++|+...-. ..+ ...+.++.|+-+|.++|+..|+.+..
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 00246777777765432 344 44556688999999999999887653
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=1.3e-16 Score=151.30 Aligned_cols=132 Identities=25% Similarity=0.248 Sum_probs=95.5
Q ss_pred ccccCC-ceEEEEeecccCceEEEEEE-eCCCCeEEEEEEechhHH-------------------------hHHHHHHHH
Q 013220 31 DLFNGG-RYIAQRKLGWGQFSIVWLAY-DTRTSSYVALKIQKSAAQ-------------------------FAQAALHEI 83 (447)
Q Consensus 31 ~~~~~~-~y~l~~~lG~G~~g~Vy~a~-~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~E~ 83 (447)
.++..| -|.+.+.||+|++|.||+|. +..++..||+|+++.... ....+.+|+
T Consensus 22 ~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 101 (237)
T smart00090 22 SLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEF 101 (237)
T ss_pred HHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHH
Confidence 345544 48899999999999999998 667899999998764310 112356899
Q ss_pred HHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhh
Q 013220 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRE 162 (447)
Q Consensus 84 ~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~ 162 (447)
+++..+.+. ...+.+++.. ...++||||+ |.++....... ..+....+..++.|++.+|++||+.
T Consensus 102 ~~L~~L~~~----~i~~p~~~~~--------~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~ 167 (237)
T smart00090 102 RNLQRLYEA----GVPVPKPIAW--------RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE 167 (237)
T ss_pred HHHHHHHhc----CCCCCeeeEe--------cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc
Confidence 999999642 1222233321 1247999999 54554433221 2355666789999999999999996
Q ss_pred CC-cccccCCCCCeEe
Q 013220 163 LG-IIHTDLKPENILL 177 (447)
Q Consensus 163 ~g-IiH~Dikp~Nill 177 (447)
| |+|+|+||+||++
T Consensus 168 -g~iiH~Dikp~NIli 182 (237)
T smart00090 168 -GELVHGDLSEYNILV 182 (237)
T ss_pred -CCEEeCCCChhhEEE
Confidence 9 9999999999999
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=1.8e-16 Score=159.40 Aligned_cols=174 Identities=28% Similarity=0.440 Sum_probs=128.7
Q ss_pred eEEEEEecc-cccHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCC
Q 013220 116 HLCMVLEFL-GDSLLRLIKYSR-YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLT 193 (447)
Q Consensus 116 ~~~lvmE~~-~~~L~~~~~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~ 193 (447)
++||.|+.| ..+|.+.+.+.+ ....+......++.|+..|++| + |.+|+|+||.||.+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~--------------- 390 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFS--------------- 390 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccc---------------
Confidence 799999999 788888886432 3346667889999999999999 6 999999999999993
Q ss_pred CCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccc-----
Q 013220 194 PILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----- 268 (447)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~----- 268 (447)
.+..+|+.|||+......
T Consensus 391 ---------------------------------------------------------~d~q~kIgDFgl~ts~~~~~~~~ 413 (516)
T KOG1033|consen 391 ---------------------------------------------------------DDDQLKIGDFGLVTSQDKDETVA 413 (516)
T ss_pred ---------------------------------------------------------cchhhhhhhhhheeecccCCccc
Confidence 345799999999865442
Q ss_pred ----ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhC-CCCCCCCCCCCCCCchHHHHHHHHHh-CCCCHHh
Q 013220 269 ----QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG-DMLFAPKSGQGFCEDEDHLALMMELI-GKMPRKI 342 (447)
Q Consensus 269 ----~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 342 (447)
..+..+||..|++||.+.+.-|+.++||||||++|++++.- ...|. .+.-...+. |..|+.+
T Consensus 414 ~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e------------r~~t~~d~r~g~ip~~~ 481 (516)
T KOG1033|consen 414 PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE------------RIATLTDIRDGIIPPEF 481 (516)
T ss_pred chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH------------HHHhhhhhhcCCCChHH
Confidence 24556899999999999999999999999999999999972 12211 111111110 1111111
Q ss_pred hhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 343 AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
-.+.+ .-.+||..||.+.|.+||++.+...|+|.+
T Consensus 482 --------------------------------------~~d~p-~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 482 --------------------------------------LQDYP-EEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred --------------------------------------hhcCc-HHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 01112 344899999999999999988888888753
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.61 E-value=2.1e-15 Score=139.15 Aligned_cols=132 Identities=30% Similarity=0.370 Sum_probs=93.3
Q ss_pred ccccccCccccCCc-eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH-----------------------hHHHH
Q 013220 24 YHAVRVGDLFNGGR-YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ-----------------------FAQAA 79 (447)
Q Consensus 24 ~~~~~~g~~~~~~~-y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-----------------------~~~~~ 79 (447)
|..+..+.+.-.+. |.+.+.||.|+||.||+|.+. +++.||||++..... .....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (198)
T cd05144 2 YDYLALHTLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAA 80 (198)
T ss_pred ccHHHHHHHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHH
Confidence 34444555555443 889999999999999999874 789999997653210 11235
Q ss_pred HHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Q 013220 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDY 158 (447)
Q Consensus 80 ~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~ 158 (447)
..|+.++..+.+.. ..+...++. ...++||||+ |.++..... ......++.+++.++.+
T Consensus 81 ~~E~~~l~~l~~~~----i~v~~~~~~--------~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~ 140 (198)
T cd05144 81 QKEFAALKALYEEG----FPVPKPIDW--------NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVK 140 (198)
T ss_pred HHHHHHHHHHHHcC----CCCCceeec--------CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHH
Confidence 67888888885432 123333321 2358999999 666654321 13456788999999999
Q ss_pred HHhhCCcccccCCCCCeEe
Q 013220 159 LHRELGIIHTDLKPENILL 177 (447)
Q Consensus 159 lH~~~gIiH~Dikp~Nill 177 (447)
+|+. ||+|+||||+||++
T Consensus 141 lh~~-gi~H~Dl~p~Nill 158 (198)
T cd05144 141 AYKH-GIIHGDLSEFNILV 158 (198)
T ss_pred HHHC-CCCcCCCCcccEEE
Confidence 9996 99999999999999
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.58 E-value=1.8e-14 Score=133.87 Aligned_cols=117 Identities=21% Similarity=0.276 Sum_probs=87.6
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH---------HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
+.||+|++|.||+|.+ .+..+++|+..... .....+.+|++++..+.+ ++|.....++..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~~~~--- 70 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK------AGVNVPAVYFVD--- 70 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCeEEEEe---
Confidence 5789999999999976 56678889754221 112357789999999853 334333333332
Q ss_pred CcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 113 NGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 113 ~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
....+++|||+ |.+|.+.+.... . ....++.+++.+|+++|+. |++|+|++|.||++
T Consensus 71 -~~~~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~ 128 (211)
T PRK14879 71 -PENFIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMIL 128 (211)
T ss_pred -CCCCEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEE
Confidence 24678999999 788988775321 2 7788999999999999996 99999999999999
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.56 E-value=3.4e-14 Score=130.87 Aligned_cols=113 Identities=21% Similarity=0.284 Sum_probs=82.0
Q ss_pred eecccCceEEEEEEeCCCCeEEEEEEechhH---------HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAA---------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.||+|+||+||+|.. .+..+++|+..... .....+.+|+++++.+.+.. ..+..++.. .
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~----i~~p~~~~~--~---- 68 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG----VNTPVVYDV--D---- 68 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC----CCCCEEEEE--E----
Confidence 379999999999974 56788889744211 11345778999999996432 122222222 1
Q ss_pred cceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 114 GQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 114 ~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
....+++|||+ |.+|.+.+.... ..++.+++.+|+++|+. |++|+|++|+||++
T Consensus 69 ~~~~~lv~e~~~g~~l~~~~~~~~---------~~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~ 123 (199)
T TIGR03724 69 PDNKTIVMEYIEGKPLKDVIEEGN---------DELLREIGRLVGKLHKA-GIVHGDLTTSNIIV 123 (199)
T ss_pred CCCCEEEEEEECCccHHHHHhhcH---------HHHHHHHHHHHHHHHHC-CeecCCCCcceEEE
Confidence 23568999999 788887664321 17889999999999996 99999999999999
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.53 E-value=2.6e-14 Score=146.09 Aligned_cols=200 Identities=20% Similarity=0.239 Sum_probs=144.0
Q ss_pred CcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCc-ccccCCCC
Q 013220 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGI-IHTDLKPE 173 (447)
Q Consensus 96 ~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gI-iH~Dikp~ 173 (447)
.|.|+.++++...+. ..+++|.+|| .|+|.+.+... ...++..-...+++.++.||+|+|.. .| .|+.++..
T Consensus 5 ~h~n~~~f~g~~~~~----~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s-~i~~hg~l~s~ 78 (484)
T KOG1023|consen 5 DHDNLNKFIGASVDG----PEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS-PIGYHGALKSS 78 (484)
T ss_pred chhhhhhheeeEecC----CceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC-cceeeeeeccc
Confidence 789999999998854 7899999999 89999988652 24477777888899999999999986 44 89999999
Q ss_pred CeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc
Q 013220 174 NILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM 253 (447)
Q Consensus 174 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (447)
|+++ +..+
T Consensus 79 nClv------------------------------------------------------------------------d~~w 86 (484)
T KOG1023|consen 79 NCLV------------------------------------------------------------------------DSRW 86 (484)
T ss_pred ccee------------------------------------------------------------------------eeeE
Confidence 9999 5578
Q ss_pred ceeEeecCccccccc-----ccccCCCCCCccChHHhhcC---C----CCccchhHhHHHHHHHHhhCCCCCCCCCCCCC
Q 013220 254 RCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILRA---G----YSFSVDMWSFACTAFELATGDMLFAPKSGQGF 321 (447)
Q Consensus 254 ~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~l~~~---~----~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~ 321 (447)
.+||.|||+...... ......-..-|.|||.+.+. . .+.+.||||+|++++++++..-||.......
T Consensus 87 ~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~- 165 (484)
T KOG1023|consen 87 VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE- 165 (484)
T ss_pred EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccC-
Confidence 899999999865432 11111124568999999763 1 3678999999999999999999998754221
Q ss_pred CCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCC
Q 013220 322 CEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE 401 (447)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~ 401 (447)
...+.+..+.+..... . ...+... .+..+++..++..||..+|+
T Consensus 166 ----~~~eii~~~~~~~~~~-------~--------------------rP~i~~~-----~e~~~~l~~l~~~cw~e~P~ 209 (484)
T KOG1023|consen 166 ----DPDEIILRVKKGGSNP-------F--------------------RPSIELL-----NELPPELLLLVARCWEEIPE 209 (484)
T ss_pred ----ChHHHHHHHHhcCCCC-------c--------------------Ccchhhh-----hhcchHHHHHHHHhcccChh
Confidence 1122222221100000 0 0000000 03344788999999999999
Q ss_pred CCCChHHHh
Q 013220 402 KRPTAQQCL 410 (447)
Q Consensus 402 kRpta~elL 410 (447)
+||+++++-
T Consensus 210 ~rPs~~~i~ 218 (484)
T KOG1023|consen 210 KRPSIEQIR 218 (484)
T ss_pred hCccHHHHH
Confidence 999998874
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.52 E-value=7.7e-14 Score=147.97 Aligned_cols=121 Identities=18% Similarity=0.231 Sum_probs=87.7
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEech---h----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS---A----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~---~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
..|...+.||+|+||+||+|.+......+.+++.+. . ......+.+|+++++.+ .|++|+....+..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~~~~i~~p~~~~~ 406 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA------RRAGVPTPVIYDV 406 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh------cccCCCeeEEEEE
Confidence 446778899999999999997654433222222221 1 11234678899999999 4555555444333
Q ss_pred ccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 109 HAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
. ....++||||+ +++|.+.+. ....++.+++.+|++||+. ||+|||+||+||++
T Consensus 407 ~----~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl 461 (535)
T PRK09605 407 D----PEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV 461 (535)
T ss_pred e----CCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE
Confidence 2 23578999999 888887664 3467899999999999996 99999999999999
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.51 E-value=8.4e-14 Score=126.83 Aligned_cols=119 Identities=31% Similarity=0.399 Sum_probs=79.2
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhH---HH----------------------HHHHHHHHHHhhcCCCC
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFA---QA----------------------ALHEIEVLSAVADGDPS 95 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~---~~----------------------~~~E~~~l~~l~~~~~~ 95 (447)
.+.||+|+||+||+|.+. +++.||||++....... .. ...|.+.+..+.+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--- 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA--- 77 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc---
Confidence 457999999999999876 78999999876432110 11 13456666666432
Q ss_pred CcceeeeecccccccCCCcceEEEEEecc-cccHH-HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-hCCcccccCCC
Q 013220 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLL-RLIKYSRYKGLELNKVREICKYILTGLDYLHR-ELGIIHTDLKP 172 (447)
Q Consensus 96 ~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~-~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~gIiH~Dikp 172 (447)
...+.+.+.. ...++||||+ ++.+. ..+.... . ...+..++.+++.++.++|. . ||+|+|+||
T Consensus 78 -~~~~~~~~~~--------~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p 143 (187)
T cd05119 78 -GVPVPKPIDL--------NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREA-GLVHGDLSE 143 (187)
T ss_pred -CCCCCceEec--------CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhcc-CcCcCCCCh
Confidence 1112222222 2358999999 42221 1111111 1 15678899999999999999 7 999999999
Q ss_pred CCeEe
Q 013220 173 ENILL 177 (447)
Q Consensus 173 ~Nill 177 (447)
+||++
T Consensus 144 ~Nili 148 (187)
T cd05119 144 YNILV 148 (187)
T ss_pred hhEEE
Confidence 99999
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=1.6e-15 Score=161.30 Aligned_cols=257 Identities=23% Similarity=0.308 Sum_probs=187.6
Q ss_pred CceEEEEeecccCceEEEEEEeCC-CCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTR-TSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
..|.+.+.||+|+|+.|-++.... +...+|.|.+... .........|..+-..+. .|.|++.+++...+.
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s-----~h~n~~~~~~~~~~~- 93 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS-----KHSNTVHMIEPSSSP- 93 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc-----ccccccccCCccCCC-
Confidence 578899999999999999987643 4556666654433 223334444666666663 499999999988754
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-hhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH-RELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH-~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
+..+++++|. |++++..+.......++...+..++.|+..++.|+| .. ++.|+|+||+|.++..
T Consensus 94 ---~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~---------- 159 (601)
T KOG0590|consen 94 ---RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDE---------- 159 (601)
T ss_pred ---cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhcc----------
Confidence 7899999999 888887773222125677788899999999999999 75 9999999999999843
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCccc-ceeEeecCccccccc
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANK 268 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kL~Dfg~a~~~~~ 268 (447)
.. .++..|||+|.....
T Consensus 160 --------------------------------------------------------------s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 160 --------------------------------------------------------------SGSALKIADFGLATAYRN 177 (601)
T ss_pred --------------------------------------------------------------CCCcccCCCchhhccccc
Confidence 33 689999999964432
Q ss_pred ------ccccCCC-CCCccChHHhhcCC-CCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCH
Q 013220 269 ------QFAEEIQ-TRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 340 (447)
Q Consensus 269 ------~~~~~~g-t~~y~aPE~l~~~~-~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (447)
.....+| ++.|.|||...+.. .....|+||.|+++..+++|..|+........
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~------------------- 238 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG------------------- 238 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-------------------
Confidence 2233478 99999999998854 46889999999999999999999876542210
Q ss_pred HhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCccccc
Q 013220 341 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 417 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~ 417 (447)
.++...... . ...............+++.+++..+|.+|.+.+++-.+||+..
T Consensus 239 ----------~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 239 ----------RYSSWKSNK---G-----------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ----------cceeecccc---c-----------ccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 000000000 0 0000112234557779999999999999999999999999998
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.41 E-value=3.1e-12 Score=121.60 Aligned_cols=122 Identities=20% Similarity=0.191 Sum_probs=81.9
Q ss_pred eec-ccCceEEEEEEeCCCCeEEEEEEechhH--------------HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccc
Q 013220 43 KLG-WGQFSIVWLAYDTRTSSYVALKIQKSAA--------------QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHF 107 (447)
Q Consensus 43 ~lG-~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~ 107 (447)
.|| .|+.|+||.+... +..+++|.+.... .....+.+|++++..+.+.. ..+++.++..
T Consensus 38 ~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g----i~vP~pl~~~ 111 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG----LPVPRPIAAR 111 (239)
T ss_pred eeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC----CCCceeEeee
Confidence 466 7888888888653 6788998764210 11235678999999996532 1234444443
Q ss_pred cccCCCcceEEEEEecc-c-ccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEee
Q 013220 108 KHAGPNGQHLCMVLEFL-G-DSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 108 ~~~~~~~~~~~lvmE~~-~-~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
..........++|||++ | .+|...+.. ..+++. .+.+++.+|.+||++ ||+|+|+||.|||+.
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv~ 176 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILLD 176 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEEc
Confidence 22211112356999999 5 478777643 234443 367899999999997 999999999999993
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.41 E-value=1.5e-12 Score=112.81 Aligned_cols=118 Identities=23% Similarity=0.291 Sum_probs=90.0
Q ss_pred EEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
+.+.||.|.++.||++.... ..+++|....... ...+.+|+++++.+.+. ...+++++..+.. ....++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~----~~~~~~ 70 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK----GLPVPKVLASGES----DGWSYL 70 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCC----CCccEE
Confidence 45789999999999998754 7899998766543 45788999999999753 2456666655543 257999
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhh--CCcccccCCCCCeEe
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRE--LGIIHTDLKPENILL 177 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~--~gIiH~Dikp~Nill 177 (447)
+|||+ +..+..+ +......++.+++.+++.+|.. .+++|+|++|.||++
T Consensus 71 v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~ 122 (155)
T cd05120 71 LMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV 122 (155)
T ss_pred EEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE
Confidence 99999 5545332 3445567889999999999983 169999999999999
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=7.1e-13 Score=135.83 Aligned_cols=253 Identities=22% Similarity=0.237 Sum_probs=183.4
Q ss_pred CceEEEEeecc--cCceEEEEEEe--CCCCeEEEEEEechh---HHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccc
Q 013220 36 GRYIAQRKLGW--GQFSIVWLAYD--TRTSSYVALKIQKSA---AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFK 108 (447)
Q Consensus 36 ~~y~l~~~lG~--G~~g~Vy~a~~--~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~ 108 (447)
..+.+.+.+|. |.+|.||.+.- ..+...+|+|..+.. ......-.+|+....++. .|++.++.+..|.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~-----~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKID-----SHENPVRDSPAWE 188 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccC-----ccccccccCcccc
Confidence 56788889999 99999999977 778899999963322 111223445665555554 8899999888877
Q ss_pred ccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHH----HHHHHHhhCCcccccCCCCCeEeeecCCCC
Q 013220 109 HAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILT----GLDYLHRELGIIHTDLKPENILLVSTIDPS 184 (447)
Q Consensus 109 ~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~----aL~~lH~~~gIiH~Dikp~Nill~~~~~~~ 184 (447)
. +...++-.|.|+.++...... ...-++...+.....+... ||..+|+. +|+|.|+||+||+...+
T Consensus 189 ~----~~~lfiqtE~~~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~~~~---- 258 (524)
T KOG0601|consen 189 G----SGILFIQTELCGESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFTTSD---- 258 (524)
T ss_pred c----CCcceeeeccccchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheecccc----
Confidence 4 579999999999888887753 3334788888899999999 99999996 99999999999999431
Q ss_pred CCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc
Q 013220 185 KDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC 264 (447)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~ 264 (447)
...++++|||...
T Consensus 259 -------------------------------------------------------------------~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 259 -------------------------------------------------------------------WTSCKLTDFGLVS 271 (524)
T ss_pred -------------------------------------------------------------------cceeecCCcceeE
Confidence 2668999999887
Q ss_pred cccccc-c------cC-CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhC
Q 013220 265 RANKQF-A------EE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG 336 (447)
Q Consensus 265 ~~~~~~-~------~~-~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g 336 (447)
.+.... . .. .|..-|++||.+.+ .++.+.||+++|.++.+...+..++.... ...+.++...+
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~----~~~W~~~r~~~---- 342 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK----NSSWSQLRQGY---- 342 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC----CCCcccccccc----
Confidence 654321 1 11 46788999999854 57899999999999999888876554320 00111110000
Q ss_pred CCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 337 KMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
.|. .+-...+.++...+..|++.+|..|++++.+++|+++.
T Consensus 343 -ip~--------------------------------------e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 343 -IPL--------------------------------------EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH 383 (524)
T ss_pred -Cch--------------------------------------hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence 000 01112234555689999999999999999999999988
Q ss_pred cc
Q 013220 417 LR 418 (447)
Q Consensus 417 ~~ 418 (447)
..
T Consensus 384 s~ 385 (524)
T KOG0601|consen 384 SK 385 (524)
T ss_pred ch
Confidence 54
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.8e-11 Score=116.88 Aligned_cols=204 Identities=21% Similarity=0.283 Sum_probs=136.3
Q ss_pred CcceeeeecccccccCC-CcceEEEEEecc-cccHHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhh-CCcccccC
Q 013220 96 NEKCVIRLIDHFKHAGP-NGQHLCMVLEFL-GDSLLRLIKYSRYK--GLELNKVREICKYILTGLDYLHRE-LGIIHTDL 170 (447)
Q Consensus 96 ~~~~Iv~~~~~~~~~~~-~~~~~~lvmE~~-~~~L~~~~~~~~~~--~l~~~~~~~i~~qil~aL~~lH~~-~gIiH~Di 170 (447)
.|.||++++.+|.+... +.....++.||| .+++.+++++-.++ .+..+...+|+.||+.||.|||+. --|+|+++
T Consensus 125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgnl 204 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNL 204 (458)
T ss_pred HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCc
Confidence 57789999999998765 556899999999 88999988764433 377888899999999999999982 26999999
Q ss_pred CCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCC
Q 013220 171 KPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG 250 (447)
Q Consensus 171 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (447)
.-+-|++.+
T Consensus 205 Tc~tifiq~----------------------------------------------------------------------- 213 (458)
T KOG1266|consen 205 TCDTIFIQH----------------------------------------------------------------------- 213 (458)
T ss_pred chhheeecC-----------------------------------------------------------------------
Confidence 999998843
Q ss_pred cccceeEeecCcc-----cccc--cccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCC-CCCCCCCCCC
Q 013220 251 IDMRCKVVDFGNA-----CRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML-FAPKSGQGFC 322 (447)
Q Consensus 251 ~~~~~kL~Dfg~a-----~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~P-f~~~~~~~~~ 322 (447)
++-+|+.--... .... -......+-++|.|||.-.-...+.++|||++|.-..+|..+..- -.+.++.
T Consensus 214 -ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~--- 289 (458)
T KOG1266|consen 214 -NGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKV--- 289 (458)
T ss_pred -CceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCccee---
Confidence 222232111100 0000 011112356789999886655667899999999888888877542 1111110
Q ss_pred CchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCC
Q 013220 323 EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK 402 (447)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~k 402 (447)
..+..++. .++|. ....-++++.+||+..|..
T Consensus 290 ~~ee~ia~--~i~~l----------------------------------------------en~lqr~~i~kcl~~eP~~ 321 (458)
T KOG1266|consen 290 EVEENIAN--VIIGL----------------------------------------------ENGLQRGSITKCLEGEPNG 321 (458)
T ss_pred ehhhhhhh--heeec----------------------------------------------cCccccCcCcccccCCCCC
Confidence 00000000 00000 0112347899999999999
Q ss_pred CCChHHHhcCcccccccCCc
Q 013220 403 RPTAQQCLQHPWLSLRNSTR 422 (447)
Q Consensus 403 Rpta~elL~hp~f~~~~~~~ 422 (447)
||++.++|.||-+-..++..
T Consensus 322 rp~ar~llfHpllfeVhslk 341 (458)
T KOG1266|consen 322 RPDARLLLFHPLLFEVHSLK 341 (458)
T ss_pred CcchhhhhcCceeeecchHH
Confidence 99999999999777665443
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.19 E-value=2.1e-10 Score=120.24 Aligned_cols=129 Identities=17% Similarity=0.263 Sum_probs=76.2
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhH-----------------------------------HhHHH--
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-----------------------------------QFAQA-- 78 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-----------------------------------~~~~~-- 78 (447)
..|.. +.||+|++|.||+|+...+|+.||||+++... ...+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35776 78999999999999988889999999976331 11112
Q ss_pred ----HHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCC-----CCHHHHHHH
Q 013220 79 ----ALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKG-----LELNKVREI 148 (447)
Q Consensus 79 ----~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~-----l~~~~~~~i 148 (447)
+.+|.+.+..+.... .+...+.+-.+|.+. ....++||||+ |..+.++-.... .+ +.+..+..+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f--~~~~~v~VP~v~~d~---st~~VLvmE~i~G~~l~d~~~l~~-~g~d~~~la~~~v~~~ 272 (537)
T PRK04750 199 DELDLMREAANASQLRRNF--EDSDMLYVPEVYWDY---CSETVMVMERMYGIPVSDVAALRA-AGTDMKLLAERGVEVF 272 (537)
T ss_pred HhhCHHHHHHHHHHHHHHc--cCCCCeecceeeccc---CCCceEEEeeecCccHHhHHHHHh-cCCCHHHHHHHHHHHH
Confidence 233444444443221 111112222222221 13577999999 777866422111 22 233334444
Q ss_pred HHHHHHHHHHHHhhCCcccccCCCCCeEeee
Q 013220 149 CKYILTGLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 149 ~~qil~aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
+.|++ .. |++|+|+||.||++..
T Consensus 273 ~~Qif-------~~-GffHaDpHPGNIlv~~ 295 (537)
T PRK04750 273 FTQVF-------RD-GFFHADMHPGNIFVSY 295 (537)
T ss_pred HHHHH-------hC-CeeeCCCChHHeEEec
Confidence 44443 45 9999999999999943
No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.18 E-value=1.3e-11 Score=133.01 Aligned_cols=320 Identities=18% Similarity=0.137 Sum_probs=187.6
Q ss_pred CCCCccccCCCCCCCccccccC-ccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHH
Q 013220 9 SEDDDEGIDSYRKGGYHAVRVG-DLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLS 87 (447)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~ 87 (447)
+..+..+=+.-++..+-|...- +...-+.+.+.+-+-+|.++.++.+.-..++..+++|+..........-..++.--+
T Consensus 776 ss~eS~pgdp~~sls~sP~sp~~yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s 855 (1205)
T KOG0606|consen 776 SSSESLPGDPTRSLSASPRSPTKYRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKS 855 (1205)
T ss_pred cccccCCCCcccccccCCCCcccccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCcc
Confidence 3333333344455555555433 222236678888999999999999987777888888865544321110000110000
Q ss_pred HhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q 013220 88 AVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGII 166 (447)
Q Consensus 88 ~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIi 166 (447)
.+ .....+|.++.....|. -....+++|+|+ +++|.+.+.... +.+.+-++.+...+..++++||+. .+.
T Consensus 856 ~~--~i~p~~P~v~~~~~s~~----~rsP~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~-~r~ 926 (1205)
T KOG0606|consen 856 NI--LITPRSPAVVRSFPSFP----CRSPLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS-LRK 926 (1205)
T ss_pred Cc--cccCCCCceecccCCCC----CCCCcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc-hhh
Confidence 01 01124466665544432 446899999999 778888775433 366667778888899999999985 799
Q ss_pred cccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCc
Q 013220 167 HTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPER 246 (447)
Q Consensus 167 H~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (447)
|+|++|+|++....... +... .+. -. ..+......+...+
T Consensus 927 h~~~~p~~~l~~~~gh~-~l~~-~~t----~~-----------------------------~vg~~~p~~~~sg~----- 966 (1205)
T KOG0606|consen 927 HRDLKPDSLLIAYDGHR-PLTD-FGT----LS-----------------------------KVGLIPPTTDLSGP----- 966 (1205)
T ss_pred cccccccchhhcccCCc-ccCc-ccc----cc-----------------------------ccccccCcCCcccc-----
Confidence 99999999997442100 0000 000 00 00000000000000
Q ss_pred cCCCcccceeEeecCccccccc-------ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCC
Q 013220 247 CLDGIDMRCKVVDFGNACRANK-------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQ 319 (447)
Q Consensus 247 ~~~~~~~~~kL~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~ 319 (447)
...+..-.++......+ .....++|+-|.+||.+.+.....++|.|++|+++++.++|..||.....+
T Consensus 967 -----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 967 -----SSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred -----cccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence 00000111111111110 112236899999999999999999999999999999999999999766422
Q ss_pred CCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccC
Q 013220 320 GFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFT 399 (447)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d 399 (447)
. +++-+......| +.-+...+....+++.+.|..+
T Consensus 1042 ~----------~f~ni~~~~~~~-----------------------------------p~g~~~~s~~aq~~~~~ll~~~ 1076 (1205)
T KOG0606|consen 1042 Q----------IFENILNRDIPW-----------------------------------PEGPEEGSYEAQDLINRLLTEE 1076 (1205)
T ss_pred h----------hhhccccCCCCC-----------------------------------CCCccccChhhhhhhhhhhccC
Confidence 1 111111111111 0122334667889999999999
Q ss_pred CCCCCChH---HHhcCcccccccCCcccccc
Q 013220 400 PEKRPTAQ---QCLQHPWLSLRNSTRDETKN 427 (447)
Q Consensus 400 P~kRpta~---elL~hp~f~~~~~~~~~~~~ 427 (447)
|.+|..+. ++-.||||+...--+...++
T Consensus 1077 ~~qr~~a~~~~e~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1077 PTQRLGAKGAAEVKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred chhccCcccccccccCCccCCCCcccccccc
Confidence 99999887 88899999987644444443
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=4e-11 Score=123.12 Aligned_cols=247 Identities=18% Similarity=0.132 Sum_probs=172.2
Q ss_pred CceEEEEeecccCceEEEEEEeC-CCCeEEEEEEechhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDT-RTSSYVALKIQKSAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
++|.++..||.|.|+.|+..... .++..|++|...... .....-..|+-+...+. .|.++++++..|...
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~-----~~~~~~g~~~~W~~~- 338 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG-----SHLPSVGKNSSWSQL- 338 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh-----cccccCCCCCCcccc-
Confidence 67999999999999999998644 678899999544321 11223344666666665 788899988888854
Q ss_pred CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccC
Q 013220 112 PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRS 190 (447)
Q Consensus 112 ~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~ 190 (447)
+..|+-.||| ++++....... ..+++...+.+..|++.++-++|+. .++|+|+||.||++..+
T Consensus 339 ---r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~---------- 402 (524)
T KOG0601|consen 339 ---RQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISND---------- 402 (524)
T ss_pred ---ccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccc----------
Confidence 6788999999 66655443222 2378888999999999999999996 99999999999999431
Q ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc
Q 013220 191 GLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 270 (447)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~ 270 (447)
.+..++.|||......-..
T Consensus 403 -------------------------------------------------------------~~~~~~~~~~~~t~~~~~~ 421 (524)
T KOG0601|consen 403 -------------------------------------------------------------GFFSKLGDFGCWTRLAFSS 421 (524)
T ss_pred -------------------------------------------------------------hhhhhccccccccccceec
Confidence 1456788888775432222
Q ss_pred ccCCCCCCcc--ChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCC
Q 013220 271 AEEIQTRQYR--APEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 348 (447)
Q Consensus 271 ~~~~gt~~y~--aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (447)
.-....-++. ++.......+..++|++|||+.+.+.+++...-.... +
T Consensus 422 ~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~---------~--------------------- 471 (524)
T KOG0601|consen 422 GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV---------Q--------------------- 471 (524)
T ss_pred ccccccccccccchhhccccccccccccccccccccccccCcccCcccc---------c---------------------
Confidence 2222333344 4555556678899999999999999998854322111 0
Q ss_pred ccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccc
Q 013220 349 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 416 (447)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~ 416 (447)
+..+..............+..+...++..++..|+.+-++..|+=|-
T Consensus 472 ---------------------~~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 472 ---------------------SLTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ---------------------ceeeecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 11111122222333446777899999999999999999998886443
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.13 E-value=4e-10 Score=116.32 Aligned_cols=124 Identities=19% Similarity=0.268 Sum_probs=77.4
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHh-----------------------------------H------HHH
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQF-----------------------------------A------QAA 79 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-----------------------------------~------~~~ 79 (447)
.+.||+|++|.||+|+.. +|+.||||+.+..... . -.+
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 356999999999999864 6899999996532100 0 024
Q ss_pred HHHHHHHHHhhcCCCCCcce--eeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHH-H
Q 013220 80 LHEIEVLSAVADGDPSNEKC--VIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILT-G 155 (447)
Q Consensus 80 ~~E~~~l~~l~~~~~~~~~~--Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~-a 155 (447)
.+|.+.+..+.... .++++ |.+++..+. ...++||||+ |.++.+...... .+.+ ...++.+++. .
T Consensus 201 ~~Ea~n~~~~~~~~-~~~~~v~vP~v~~~~~------~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~ 269 (437)
T TIGR01982 201 RREAANASELGENF-KNDPGVYVPEVYWDRT------SERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSF 269 (437)
T ss_pred HHHHHHHHHHHHhc-CCCCCEEeCCEehhhc------CCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHH
Confidence 44555555554321 12222 223332221 2468999999 777776654321 1222 2345555555 4
Q ss_pred HHHHHhhCCcccccCCCCCeEe
Q 013220 156 LDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 156 L~~lH~~~gIiH~Dikp~Nill 177 (447)
+..+|.. |++|+|++|.||++
T Consensus 270 l~ql~~~-g~~H~D~hPgNilv 290 (437)
T TIGR01982 270 LNQVLRD-GFFHADLHPGNIFV 290 (437)
T ss_pred HHHHHhC-CceeCCCCcccEEE
Confidence 6788986 99999999999999
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.12 E-value=1.9e-10 Score=102.67 Aligned_cols=113 Identities=21% Similarity=0.191 Sum_probs=79.6
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMV 120 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lv 120 (447)
.+.|+.|.++.||+++.. +..|++|+.............|+++++.+.+.. .+.+++.... ...++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~-----~~P~~~~~~~------~~~~lv 69 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAG-----IGPKLYYFDP------ETGVLI 69 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhC-----CCCceEEEeC------CCCeEE
Confidence 467889999999999764 778999987655432345678999999986432 1223333221 234799
Q ss_pred Eecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCc-----ccccCCCCCeEe
Q 013220 121 LEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGI-----IHTDLKPENILL 177 (447)
Q Consensus 121 mE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gI-----iH~Dikp~Nill 177 (447)
|||+ |.++... .. ....++.+++.+|+.||+. ++ +|+|++|.||++
T Consensus 70 ~e~i~G~~l~~~-------~~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~ 121 (170)
T cd05151 70 TEFIEGSELLTE-------DF---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLL 121 (170)
T ss_pred EEecCCCccccc-------cc---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEE
Confidence 9999 5555322 01 1134567899999999985 75 999999999999
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.08 E-value=8.4e-10 Score=101.16 Aligned_cols=121 Identities=18% Similarity=0.232 Sum_probs=82.2
Q ss_pred EeecccCceEEEEEEeCC------CCeEEEEEEechh-------H----------------HhHHHHH----HHHHHHHH
Q 013220 42 RKLGWGQFSIVWLAYDTR------TSSYVALKIQKSA-------A----------------QFAQAAL----HEIEVLSA 88 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~------~~~~vaiK~~~~~-------~----------------~~~~~~~----~E~~~l~~ 88 (447)
..||.|--+.||.|.... .+..+|||+.+.. . .....+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 3578999985421 1 0112233 79999999
Q ss_pred hhcCCCCCcceeeeecccccccCCCcceEEEEEeccccc-HHH-HHHhhccCCCCHHHHHHHHHHHHHHHHHH-HhhCCc
Q 013220 89 VADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDS-LLR-LIKYSRYKGLELNKVREICKYILTGLDYL-HRELGI 165 (447)
Q Consensus 89 l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~-L~~-~~~~~~~~~l~~~~~~~i~~qil~aL~~l-H~~~gI 165 (447)
+.... ..+.+.+.. ..-+|||||++++ +.. .+.. ..++.+.+..+..+++.+|..| |.. ||
T Consensus 83 l~~~G----v~vP~pi~~--------~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~-gl 146 (197)
T cd05146 83 MQKAG----IPCPEVVVL--------KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC-NL 146 (197)
T ss_pred HHHcC----CCCCeEEEe--------cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC-Ce
Confidence 87542 223333432 2467999999543 321 1211 1245566778889999999998 885 99
Q ss_pred ccccCCCCCeEee
Q 013220 166 IHTDLKPENILLV 178 (447)
Q Consensus 166 iH~Dikp~Nill~ 178 (447)
||+|+++.||++.
T Consensus 147 VHGDLs~~NIL~~ 159 (197)
T cd05146 147 VHADLSEYNMLWH 159 (197)
T ss_pred ecCCCCHHHEEEE
Confidence 9999999999993
No 443
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.00 E-value=4.9e-09 Score=109.07 Aligned_cols=182 Identities=16% Similarity=0.226 Sum_probs=126.5
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHH-hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcce
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ-FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQH 116 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~ 116 (447)
|.+ +..+-++.+..-.|..+.++..|.+.+++.... ......+-++-|+.+ .||+|++|++.+... ..
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl------RHP~Il~yL~t~e~~----~~ 83 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL------RHPNILSYLDTTEEE----GT 83 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhc------cCchhhhhhhhhccc----Cc
Confidence 666 455555554332466667778888887665433 233455666777777 899999999999865 58
Q ss_pred EEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCc
Q 013220 117 LCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPIL 196 (447)
Q Consensus 117 ~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~ 196 (447)
+|+|.|.+... ...+.. +........+.||+.||.|||.+++++|++|.-+.++|
T Consensus 84 ~ylvTErV~Pl-~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV------------------- 138 (690)
T KOG1243|consen 84 LYLVTERVRPL-ETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV------------------- 138 (690)
T ss_pred eEEEeeccccH-HHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE-------------------
Confidence 99999998331 112221 23567788899999999999976799999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccccccccc--ccC-
Q 013220 197 ERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--AEE- 273 (447)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~- 273 (447)
...+..||++|..+...+... .+.
T Consensus 139 -----------------------------------------------------n~~GeWkLggle~v~~~~~~~~~~~~~ 165 (690)
T KOG1243|consen 139 -----------------------------------------------------NESGEWKLGGLELVSKASGFNAPAKSL 165 (690)
T ss_pred -----------------------------------------------------cCCCcEEEeeeEEEeccccCCcccccc
Confidence 457889999998876544322 111
Q ss_pred CCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCC
Q 013220 274 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 310 (447)
Q Consensus 274 ~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~ 310 (447)
.---.|..|+.+... +...|.|-|||++++++.|.
T Consensus 166 ~~~~s~~~P~~~~~s--~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 166 YLIESFDDPEEIDPS--EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhcccChhhcCcc--ccchhhhhHHHHHHHHhCcc
Confidence 112345566554322 25679999999999999993
No 444
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.87 E-value=3.2e-08 Score=88.21 Aligned_cols=127 Identities=20% Similarity=0.133 Sum_probs=87.4
Q ss_pred EEEeecccCceEEEEEEeCCCCeEEEEEE-e-c-------hhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTSSYVALKI-Q-K-------SAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA 110 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~-~-~-------~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~ 110 (447)
..+.|-+|+-+.|+++.+ .|+..+||. + | ...........|+++|.++....+ ..|-+ +|.+.
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI-~~P~l-----~~~D~ 82 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGI-PAPRL-----IFIDT 82 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC-CCceE-----EEEec
Confidence 556778999999999954 577888883 1 1 122345677889999988854321 22222 22222
Q ss_pred CCCcceEEEEEecccc--cHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeee
Q 013220 111 GPNGQHLCMVLEFLGD--SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 111 ~~~~~~~~lvmE~~~~--~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
..-.|+|||+.+ ++.+++...-...........+++++=+.+..||.+ +|||||+...||++..
T Consensus 83 ----~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~ 148 (229)
T KOG3087|consen 83 ----YGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRS 148 (229)
T ss_pred ----CCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEec
Confidence 235689999955 677766543333344444478899999999999997 9999999999999954
No 445
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.76 E-value=1.7e-09 Score=112.86 Aligned_cols=154 Identities=24% Similarity=0.359 Sum_probs=108.7
Q ss_pred HHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhh
Q 013220 152 ILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISI 231 (447)
Q Consensus 152 il~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+..|+.|+|...++||++|.|++|.+.
T Consensus 108 v~dgl~flh~sAk~VH~ni~p~~i~~n----------------------------------------------------- 134 (700)
T KOG2137|consen 108 VADGLAFLHRSAKVVHGNIQPEAIVVN----------------------------------------------------- 134 (700)
T ss_pred ccchhhhhccCcceeecccchhheeec-----------------------------------------------------
Confidence 347999999988999999999999993
Q ss_pred hhcccCCCCCCCCCccCCCcccceeEeecCcccccccc----ccc--------CCCCCCccChHHhhcCCCCccchhHhH
Q 013220 232 RRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAE--------EIQTRQYRAPEVILRAGYSFSVDMWSF 299 (447)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~~~~~~----~~~--------~~gt~~y~aPE~l~~~~~~~~~DiwSl 299 (447)
..+..|++.|+++.....+ +.. .....-|.|||++....-++++|++|+
T Consensus 135 -------------------a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSl 195 (700)
T KOG2137|consen 135 -------------------ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSL 195 (700)
T ss_pred -------------------cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceee
Confidence 3556788888877543321 111 123567999999998777899999999
Q ss_pred HHHHHHHh-hCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhc
Q 013220 300 ACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKY 378 (447)
Q Consensus 300 Gvil~~l~-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (447)
||++|.+. .|+..+.......++ .... . .. -....
T Consensus 196 G~li~~i~~~gk~i~~a~~~~~~~-------~~~~------------------------~-----------~~--~~~~~ 231 (700)
T KOG2137|consen 196 GVLIYTIYNGGKSIIAANGGLLSY-------SFSR------------------------N-----------LL--NAGAF 231 (700)
T ss_pred eeEEEEEecCCcchhhccCCcchh-------hhhh------------------------c-----------cc--ccccc
Confidence 99999999 555555433111000 0000 0 00 00011
Q ss_pred CCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccccCC
Q 013220 379 RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 421 (447)
Q Consensus 379 ~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~~~~ 421 (447)
.+..+++.++++-|.++|..++..||++.+++..|||++..-.
T Consensus 232 ~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~ 274 (700)
T KOG2137|consen 232 GYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLK 274 (700)
T ss_pred cccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCchhh
Confidence 2345678899999999999999999999999999999986543
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.73 E-value=5.9e-08 Score=90.22 Aligned_cols=111 Identities=21% Similarity=0.195 Sum_probs=71.9
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHH--hHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--FAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
+.|+.|.++.||++.... ++.+++|+...... ....+..|.++++.+... +..+.+++....... .....++
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~----~~~vp~~~~~~~~~~-~~~~~~~ 77 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT----GVPVPKVLALCEDPS-VLGTPFY 77 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCC----CCCCCCEEEECCCCC-ccCCceE
Confidence 568999999999997643 57899998765432 355788999999999653 122344444433211 1125689
Q ss_pred EEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Q 013220 120 VLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161 (447)
Q Consensus 120 vmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~ 161 (447)
||||+ |.++...... ..++......++.+++.+|+.||+
T Consensus 78 v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~ 117 (223)
T cd05154 78 VMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHS 117 (223)
T ss_pred EEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 99999 6555443321 125556666667777777777774
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.61 E-value=4.2e-07 Score=81.41 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=77.2
Q ss_pred eecccCceEEEEEEeCCCCeEEEEEE-ech----h----HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 43 KLGWGQFSIVWLAYDTRTSSYVALKI-QKS----A----AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~~~~~vaiK~-~~~----~----~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.+++|+-+.+|.+.+. +..+++|. +++ . ..-.....+|.+++..+.... ...|- ++++..
T Consensus 3 ~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~G-V~~P~---v~dvD~----- 71 (204)
T COG3642 3 LIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAG-VPVPI---VYDVDP----- 71 (204)
T ss_pred hhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCe---EEEEcC-----
Confidence 5688999999999553 44466773 211 1 122346778999999986432 12232 233322
Q ss_pred cceEEEEEecccc-cHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeee
Q 013220 114 GQHLCMVLEFLGD-SLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 114 ~~~~~lvmE~~~~-~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
+...|+|||.+| .|.+.+... ...++..+=..+.-||.. ||+|+|+.+.||++..
T Consensus 72 -~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~ 127 (204)
T COG3642 72 -DNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSG 127 (204)
T ss_pred -CCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeC
Confidence 457799999954 555566533 145677777788999997 9999999999999943
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.55 E-value=4e-07 Score=83.12 Aligned_cols=111 Identities=28% Similarity=0.327 Sum_probs=66.2
Q ss_pred EEEEEEeCCCCeEEEEEEechhH---------------------------HhHHHHHHHHHHHHHhhcCCCCCcceeeee
Q 013220 51 IVWLAYDTRTSSYVALKIQKSAA---------------------------QFAQAALHEIEVLSAVADGDPSNEKCVIRL 103 (447)
Q Consensus 51 ~Vy~a~~~~~~~~vaiK~~~~~~---------------------------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~ 103 (447)
.||.|.. ..+..+|+|+.+... .......+|.+.|..+.... -++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G----v~vP~p 75 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG----VPVPKP 75 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-----SS--E
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC----ccCCcE
Confidence 3888876 456789999844210 11224667999999986432 224444
Q ss_pred cccccccCCCcceEEEEEeccc--ccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH-HHhhCCcccccCCCCCeEee
Q 013220 104 IDHFKHAGPNGQHLCMVLEFLG--DSLLRLIKYSRYKGLELNKVREICKYILTGLDY-LHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 104 ~~~~~~~~~~~~~~~lvmE~~~--~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~-lH~~~gIiH~Dikp~Nill~ 178 (447)
+.+. .-+|||||++ |.....+.... ++.+....++.+++..+.. +|.. ||+|||+.+.||++.
T Consensus 76 ~~~~--------~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~~NIlv~ 141 (188)
T PF01163_consen 76 YDYN--------RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSEYNILVD 141 (188)
T ss_dssp EEEE--------TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-STTSEEEE
T ss_pred EEEe--------CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhc-CceecCCChhhEEee
Confidence 4332 2469999996 54333232211 2234567788888886665 5674 999999999999994
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.52 E-value=1.6e-06 Score=83.77 Aligned_cols=96 Identities=18% Similarity=0.109 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhhcCCCCCcceeeeeccccccc-CCCcceEEEEEecccc--cHHHHHHhhccCCCCHHHHHHHHHHHHH
Q 013220 78 AALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA-GPNGQHLCMVLEFLGD--SLLRLIKYSRYKGLELNKVREICKYILT 154 (447)
Q Consensus 78 ~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~-~~~~~~~~lvmE~~~~--~L~~~~~~~~~~~l~~~~~~~i~~qil~ 154 (447)
.+.+|.+.+..+....+ ..|.+|-+ .... .+.....++|||++++ +|.+++........+......++.++..
T Consensus 74 ~a~rE~~~l~~L~~~GI-ptP~pVa~---~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 74 GADREWRAIHRLHEVGV-DTMTGVAF---GERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHHHcCC-CCCCeeEE---EEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 37789998888865432 33433333 2211 1113467899999944 5777765332334566777899999999
Q ss_pred HHHHHHhhCCcccccCCCCCeEee
Q 013220 155 GLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 155 aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
.+..||.. ||+|+|+++.|||+.
T Consensus 150 ~i~~LH~~-Gi~HgDL~~~NiLl~ 172 (268)
T PRK15123 150 MVRDMHAA-GINHRDCYICHFLLH 172 (268)
T ss_pred HHHHHHHC-cCccCCCChhhEEEe
Confidence 99999997 999999999999994
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.44 E-value=6e-06 Score=84.14 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=93.4
Q ss_pred CceEEEEEEeCCCCeEEEEEEechhHHh-HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc--
Q 013220 48 QFSIVWLAYDTRTSSYVALKIQKSAAQF-AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-- 124 (447)
Q Consensus 48 ~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-- 124 (447)
...+.|+|....+|.-|++|.+..+... ......-++..+.+ .|.|||++.++|....-....+++|++|+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl------~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL------CHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh------ccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 3468999999999999999988433221 11223345677777 78899999999984433456899999999
Q ss_pred cccHHHHHHhhc-------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 125 GDSLLRLIKYSR-------------YKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 125 ~~~L~~~~~~~~-------------~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
.++|.+..-... ....++..+..++.|+..||.++|+. |+.-+-+.|.+|++
T Consensus 362 s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv 426 (655)
T KOG3741|consen 362 SPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILV 426 (655)
T ss_pred CchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEe
Confidence 456777552111 12366788999999999999999997 99999999999999
No 451
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.36 E-value=1.2e-05 Score=80.03 Aligned_cols=194 Identities=14% Similarity=0.206 Sum_probs=120.4
Q ss_pred EEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc----cCCCcc
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH----AGPNGQ 115 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~----~~~~~~ 115 (447)
+.+.||+|+.+.+|-.- .-+.. +.|++....... ..+.+.++.... .||-+-. --+|-. -...+.
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~-VAKIYh~Pppa~-----~aqk~a~la~~p--~~p~~~~-rvaWPqa~L~G~~~~~ 83 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQ-VAKIYHAPPPAA-----QAQKVAELAATP--DAPLLNY-RVAWPQATLHGGRRGK 83 (637)
T ss_pred CCccccCCccceeeecc--hhhch-hheeecCCCchH-----HHHHHHHhccCC--CCcchhh-hhcccHHHhhCCCccc
Confidence 45678999999998652 12223 457665443211 112222232222 3433322 111111 111233
Q ss_pred eEEEEEecc-cc-cHHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEeeecCCCCCCccc
Q 013220 116 HLCMVLEFL-GD-SLLRLIKY----SRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLVSTIDPSKDPIR 189 (447)
Q Consensus 116 ~~~lvmE~~-~~-~L~~~~~~----~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~ 189 (447)
.+-++|+.+ |. -+..++.- ..+...+...+.+..+.++.|.+-||.. |.+-||++++|+|+++
T Consensus 84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~-Gh~vGDVn~~~~lVsd---------- 152 (637)
T COG4248 84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH-GHVVGDVNQNSFLVSD---------- 152 (637)
T ss_pred eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc-CCcccccCccceeeec----------
Confidence 478889988 33 24444321 1123366778899999999999999997 9999999999999954
Q ss_pred CCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeEeecCccc-cc-c
Q 013220 190 SGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNAC-RA-N 267 (447)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL~Dfg~a~-~~-~ 267 (447)
+..+.|+|-..-- .. +
T Consensus 153 --------------------------------------------------------------~~~V~LVdsDsfqi~~ng 170 (637)
T COG4248 153 --------------------------------------------------------------DSKVVLVDSDSFQINANG 170 (637)
T ss_pred --------------------------------------------------------------CceEEEEcccceeeccCC
Confidence 4557776543211 11 1
Q ss_pred cccccCCCCCCccChHHhh-----cCCCCccchhHhHHHHHHHHhhC-CCCCCCCC
Q 013220 268 KQFAEEIQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELATG-DMLFAPKS 317 (447)
Q Consensus 268 ~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~~l~~g-~~Pf~~~~ 317 (447)
......+|...|.+||.-. +..-+...|.|.|||++++++.| +.||.+..
T Consensus 171 ~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~ 226 (637)
T COG4248 171 TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIP 226 (637)
T ss_pred ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccc
Confidence 2234558899999999854 23346789999999999998876 99998763
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.31 E-value=4.6e-06 Score=79.06 Aligned_cols=120 Identities=31% Similarity=0.347 Sum_probs=80.2
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEech----------hH-------------HhHHHHHHHHHHHHHhhcCCC
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS----------AA-------------QFAQAALHEIEVLSAVADGDP 94 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~----------~~-------------~~~~~~~~E~~~l~~l~~~~~ 94 (447)
+.+..+||.|--|.||.|.+. .+..+|+|+-+. .. .......+|.+.|++|....
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G- 170 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG- 170 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC-
Confidence 568889999999999999875 678899997221 00 12235677999999995320
Q ss_pred CCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 95 SNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 95 ~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
-.|.+-++ -+.-++|||+. |-.|..+- ++.+....++..|+.-+.-.-. .||||+|+++-
T Consensus 171 ---~~VP~P~~--------~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~-~GiVHGDlSef 231 (304)
T COG0478 171 ---VKVPKPIA--------WNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYR-RGIVHGDLSEF 231 (304)
T ss_pred ---CCCCCccc--------cccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHH-cCccccCCchh
Confidence 12222222 24567999999 54454332 1234445566666666665555 49999999999
Q ss_pred CeEee
Q 013220 174 NILLV 178 (447)
Q Consensus 174 Nill~ 178 (447)
||+++
T Consensus 232 NIlV~ 236 (304)
T COG0478 232 NILVT 236 (304)
T ss_pred eEEEe
Confidence 99993
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.29 E-value=1.7e-05 Score=73.20 Aligned_cols=127 Identities=9% Similarity=-0.030 Sum_probs=86.5
Q ss_pred cccCceEEEEEEeCCCCeEEEEEEec-hh------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 45 GWGQFSIVWLAYDTRTSSYVALKIQK-SA------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 45 G~G~~g~Vy~a~~~~~~~~vaiK~~~-~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
|.||-|-|++.... |+.|=+|... .- ......+.+|+..|+.+...... -|-++ +.+. ...+.....
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvP-VP~pv-f~~~--~k~~~~~rA 100 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVI-VPKIV-FGEA--VKIEGEWRA 100 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCC-CCccc-eeee--eccCCceEE
Confidence 45777777776432 3356677543 10 22345789999999999765432 33333 2221 222234578
Q ss_pred EEEEeccc--ccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEee
Q 013220 118 CMVLEFLG--DSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 118 ~lvmE~~~--~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill~ 178 (447)
+||+|-++ .+|.+.+........+......+..++..+++-||+. |+.|+|+.+.||++.
T Consensus 101 ~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~-Gv~Hgdly~khIll~ 162 (216)
T PRK09902 101 LLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV-NRQHGCCYVRHIYVK 162 (216)
T ss_pred EEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHhheeec
Confidence 99999886 5787776543333456777788999999999999996 999999999999994
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.18 E-value=1.3e-05 Score=74.36 Aligned_cols=96 Identities=24% Similarity=0.293 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cc-cHHHHHHhhccCCCCHHHHHHHHHHHHH
Q 013220 77 QAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GD-SLLRLIKYSRYKGLELNKVREICKYILT 154 (447)
Q Consensus 77 ~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~-~L~~~~~~~~~~~l~~~~~~~i~~qil~ 154 (447)
....+|.+.+..+....+ ..|..+-+ ...........++|+|++ +. +|.+++..... .+......++.++..
T Consensus 56 ~ra~~E~~~~~~L~~~Gi-~tP~pva~---~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGI-PTPEPVAY---GERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALAR 129 (206)
T ss_pred hHHHHHHHHHHHHHHcCC-CCCcEEEE---EEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHH
Confidence 457788888888765332 33444333 332222225679999999 43 57777764322 566677899999999
Q ss_pred HHHHHHhhCCcccccCCCCCeEeee
Q 013220 155 GLDYLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 155 aL~~lH~~~gIiH~Dikp~Nill~~ 179 (447)
.++-||.. ||+|+|+++.|||+..
T Consensus 130 ~i~~lH~~-gi~H~Dl~~~NILv~~ 153 (206)
T PF06293_consen 130 LIAKLHDA-GIYHGDLNPSNILVDP 153 (206)
T ss_pred HHHHHHHC-cCCCCCCCcccEEEeC
Confidence 99999996 9999999999999954
No 455
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.16 E-value=2.6e-05 Score=73.26 Aligned_cols=122 Identities=27% Similarity=0.316 Sum_probs=77.7
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhH------------------------H-HHHHHHHHHHHhhcCCCC
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFA------------------------Q-AALHEIEVLSAVADGDPS 95 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~------------------------~-~~~~E~~~l~~l~~~~~~ 95 (447)
...|.+|.-+.||+|.. ..+..+|+|+++.....- . =...|..-|+++...
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA--- 128 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA--- 128 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 34667777789999965 457899999876432100 0 123477777776432
Q ss_pred CcceeeeecccccccCCCcceEEEEEecccccHH--HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCC
Q 013220 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLL--RLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPE 173 (447)
Q Consensus 96 ~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~--~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~ 173 (447)
+-.+.+=+.+ ..-.+||||+|.... -.++ .-++..+.+..+..+++..+.-|-...++||+|++.-
T Consensus 129 -GVrvP~Pi~~--------~~nVLvMEfIg~~g~pAP~Lk---Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEy 196 (268)
T COG1718 129 -GVRVPEPIAF--------RNNVLVMEFIGDDGLPAPRLK---DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEY 196 (268)
T ss_pred -CCCCCCceee--------cCCeEEEEeccCCCCCCCCcc---cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhh
Confidence 1112222222 356799999965411 1111 1223444677888899999988877459999999999
Q ss_pred CeEee
Q 013220 174 NILLV 178 (447)
Q Consensus 174 Nill~ 178 (447)
|||+.
T Consensus 197 NiL~~ 201 (268)
T COG1718 197 NILVH 201 (268)
T ss_pred heEEE
Confidence 99994
No 456
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.02 E-value=4.8e-05 Score=70.62 Aligned_cols=135 Identities=14% Similarity=0.164 Sum_probs=80.3
Q ss_pred ccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHH----------HHHHHHHHHHHhhcCCCCCc
Q 013220 28 RVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQ----------AALHEIEVLSAVADGDPSNE 97 (447)
Q Consensus 28 ~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~----------~~~~E~~~l~~l~~~~~~~~ 97 (447)
.+++-+-.++|...+.+-......|.+-. -.+..+++|.+.....-.+ ...+++..+..+... +-
T Consensus 23 ~l~~~i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~---g~ 97 (229)
T PF06176_consen 23 ELGEKILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNE---GF 97 (229)
T ss_pred HHHHHHHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHc---Cc
Confidence 34444445899999999988888888774 3568899998765432111 122344434444221 11
Q ss_pred ceeeeecccccccC-CCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCe
Q 013220 98 KCVIRLIDHFKHAG-PNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENI 175 (447)
Q Consensus 98 ~~Iv~~~~~~~~~~-~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Ni 175 (447)
.....++.+-.... .-....+++|||+ |..|.+... +++ .+...+.+++.-+|+. |+.|+|.+|.|+
T Consensus 98 ~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~-G~~HGD~hpgNF 166 (229)
T PF06176_consen 98 TEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKH-GFYHGDPHPGNF 166 (229)
T ss_pred cccccceeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHc-CCccCCCCcCcE
Confidence 12222111111110 0113567899999 656654321 222 2445677789999996 999999999999
Q ss_pred Eee
Q 013220 176 LLV 178 (447)
Q Consensus 176 ll~ 178 (447)
++.
T Consensus 167 lv~ 169 (229)
T PF06176_consen 167 LVS 169 (229)
T ss_pred EEE
Confidence 994
No 457
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.88 E-value=0.00033 Score=65.12 Aligned_cols=82 Identities=20% Similarity=0.194 Sum_probs=55.6
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMV 120 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lv 120 (447)
++.|+.|..+.||+..... ..+++|+.... .....+..|.++++.+..... . +.+++...... ......+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~-p---vP~~~~~~~~~-~~~~~~~~~ 73 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGI-P---VPRVLAFDTSD-EFNGFPYLL 73 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTS-B---S--EEEEEEET-EETSEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCC-C---CceEEeecccc-cccccceEE
Confidence 4678999999999998765 48999987766 556778899999999975432 2 33334322111 122358999
Q ss_pred Eecc-cccHHH
Q 013220 121 LEFL-GDSLLR 130 (447)
Q Consensus 121 mE~~-~~~L~~ 130 (447)
|+++ |..+..
T Consensus 74 ~~~i~g~~~~~ 84 (239)
T PF01636_consen 74 MEYIPGRPLDD 84 (239)
T ss_dssp EEEESSEEHHH
T ss_pred EEEeccccccc
Confidence 9999 555555
No 458
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.86 E-value=0.00013 Score=76.30 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=71.8
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHH--------------------------------hHH------HHHHH
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQ--------------------------------FAQ------AALHE 82 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--------------------------------~~~------~~~~E 82 (447)
.+.||.-+.|.|++|+... |+.||||+.+..-. ... +|..|
T Consensus 166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 3569999999999998765 99999999553210 011 23334
Q ss_pred HHHHHHhh----cCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Q 013220 83 IEVLSAVA----DGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157 (447)
Q Consensus 83 ~~~l~~l~----~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~ 157 (447)
.+-..++. +.+...--.|.+++-.+. ....++|||| |..+.++- .-...+++...+. ..+.++..
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s------t~RVLtME~~~G~~i~Dl~-~i~~~gi~~~~i~---~~l~~~~~ 314 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLS------TKRVLTMEYVDGIKINDLD-AIDKRGISPHDIL---NKLVEAYL 314 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcC------cceEEEEEecCCccCCCHH-HHHHcCCCHHHHH---HHHHHHHH
Confidence 44333332 222111222444444433 2588999999 54443321 1122346665443 33333322
Q ss_pred HHHhhCCcccccCCCCCeEeee
Q 013220 158 YLHRELGIIHTDLKPENILLVS 179 (447)
Q Consensus 158 ~lH~~~gIiH~Dikp~Nill~~ 179 (447)
.+=-..|.+|.|-+|.||++..
T Consensus 315 ~qIf~~GffHaDPHPGNilv~~ 336 (538)
T KOG1235|consen 315 EQIFKTGFFHADPHPGNILVRP 336 (538)
T ss_pred HHHHhcCCccCCCCCCcEEEec
Confidence 2111139999999999999954
No 459
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.83 E-value=0.00012 Score=76.87 Aligned_cols=126 Identities=17% Similarity=0.259 Sum_probs=72.0
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH-----------------------------------HhHH------HHH
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-----------------------------------QFAQ------AAL 80 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-----------------------------------~~~~------~~~ 80 (447)
+.|+.++=|.||+|+... |+.||||++...- ...+ ++.
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 568999999999998754 9999999954211 0111 234
Q ss_pred HHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Q 013220 81 HEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYL 159 (447)
Q Consensus 81 ~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~l 159 (447)
+|..-+..+..+-. +.+.|. +=.+|.+. ...-.++|||+ |..+.+...... .+++.+.+.....++.- .-+
T Consensus 210 ~EA~n~~~~~~nf~-~~~~v~-VP~V~we~---t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~--~q~ 281 (517)
T COG0661 210 REAANAERFRENFK-DDPDVY-VPKVYWEY---TTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFL--RQL 281 (517)
T ss_pred HHHHHHHHHHHHcC-CCCCeE-eceeehhc---cCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHH--HHH
Confidence 45555555543321 223322 12222221 13578999999 666666543222 45664444333222221 112
Q ss_pred HhhCCcccccCCCCCeEe
Q 013220 160 HRELGIIHTDLKPENILL 177 (447)
Q Consensus 160 H~~~gIiH~Dikp~Nill 177 (447)
-.. |..|.|.+|.||++
T Consensus 282 ~~d-gffHaDpHpGNi~v 298 (517)
T COG0661 282 LRD-GFFHADPHPGNILV 298 (517)
T ss_pred Hhc-CccccCCCccceEE
Confidence 224 99999999999999
No 460
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.73 E-value=0.00053 Score=64.63 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=46.9
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEE
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVL 121 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvm 121 (447)
..||.|..+.||+. .+..+++|+..... ......+|.++++.+.... ...|.++ .+... .....+||
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~g-lpvP~~~---~~~~~----~~~~glv~ 73 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLG-IPTPHPF---DLVED----GGRLGLIY 73 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcC-CCCCceE---EEEec----CCeeeeee
Confidence 57899999999984 24467889876533 2345788999999986432 1233333 33222 23467899
Q ss_pred ecccc
Q 013220 122 EFLGD 126 (447)
Q Consensus 122 E~~~~ 126 (447)
|++.|
T Consensus 74 e~i~G 78 (226)
T TIGR02172 74 ELIVG 78 (226)
T ss_pred eecCC
Confidence 99933
No 461
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.69 E-value=0.00048 Score=63.26 Aligned_cols=121 Identities=20% Similarity=0.249 Sum_probs=82.7
Q ss_pred CceEEEEeecccCc-eEEEEEEeCCCCeEEEEEEech---h------------H-------HhHHHHHHHHHHHHHhhcC
Q 013220 36 GRYIAQRKLGWGQF-SIVWLAYDTRTSSYVALKIQKS---A------------A-------QFAQAALHEIEVLSAVADG 92 (447)
Q Consensus 36 ~~y~l~~~lG~G~~-g~Vy~a~~~~~~~~vaiK~~~~---~------------~-------~~~~~~~~E~~~l~~l~~~ 92 (447)
..++..+.||.|.. |.||+++. .|+.||+|+.+. . . .....|..|.+...+|...
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 78999999999999 99999965 577999998321 0 0 2234678899998888754
Q ss_pred CCCCccee--eeecccccccC--------------CCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Q 013220 93 DPSNEKCV--IRLIDHFKHAG--------------PNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGL 156 (447)
Q Consensus 93 ~~~~~~~I--v~~~~~~~~~~--------------~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL 156 (447)
++.++ ++.++++.-.. .......||.||....- .++. .-+.+|+.-+
T Consensus 115 ---~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~----~~~~~~~~dl 177 (207)
T PF13095_consen 115 ---GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQI----RDIPQMLRDL 177 (207)
T ss_pred ---cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccch----hHHHHHHHHH
Confidence 33334 77777653321 11124577888762221 1222 3356677788
Q ss_pred HHHHhhCCcccccCCCCCeE
Q 013220 157 DYLHRELGIIHTDLKPENIL 176 (447)
Q Consensus 157 ~~lH~~~gIiH~Dikp~Nil 176 (447)
..+|. .||+-+|+++.|..
T Consensus 178 ~~~~k-~gI~~~Dv~~~ny~ 196 (207)
T PF13095_consen 178 KILHK-LGIVPRDVKPRNYR 196 (207)
T ss_pred HHHHH-CCeeeccCcccccc
Confidence 99999 59999999998865
No 462
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.69 E-value=6.3e-06 Score=85.90 Aligned_cols=198 Identities=20% Similarity=0.148 Sum_probs=133.2
Q ss_pred CCCccccccCccccCCceEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcce-
Q 013220 21 KGGYHAVRVGDLFNGGRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKC- 99 (447)
Q Consensus 21 ~~~~~~~~~g~~~~~~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~- 99 (447)
+++|.|..+-|-- .-|...+.+++|+++.+++.+...++..+ .++.... ....-++++|..+ +|||
T Consensus 229 kS~~qpp~lkDk~--kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~------n~P~~ 295 (829)
T KOG0576|consen 229 KSGFQPPTLKDKT--KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKV------NNPNP 295 (829)
T ss_pred ccCCCCCcccCCc--cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHc------cCCCC
Confidence 4577777766543 34666677899999999999877666555 5654433 2345678899998 6777
Q ss_pred eeeecccccccCCCcceEEEEEeccccc--HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 100 VIRLIDHFKHAGPNGQHLCMVLEFLGDS--LLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 100 Iv~~~~~~~~~~~~~~~~~lvmE~~~~~--L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
.+.+++-+. ..++.++.|+++++. ....+.... ..+..-+...+++.-..+++++|+. -=+|+| ||+.
T Consensus 296 ~v~~~~d~~----~E~~~~i~~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~-~~~~~d----~~l~ 365 (829)
T KOG0576|consen 296 VVRYLEDYD----GEDYLWIPMRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSS-YKVHRD----NILG 365 (829)
T ss_pred cccccccCC----cccccchhhhhhcCCccccccCChhh-Hhhhhhhhhhhhhhhcccccccccc-cccCcc----cccc
Confidence 555554433 457999999999332 211111000 1133334455566667788999984 457777 7765
Q ss_pred eecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccCCCcccceeE
Q 013220 178 VSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKV 257 (447)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kL 257 (447)
+ ....++
T Consensus 366 s-------------------------------------------------------------------------~~~~~~ 372 (829)
T KOG0576|consen 366 S-------------------------------------------------------------------------EEEVKL 372 (829)
T ss_pred c-------------------------------------------------------------------------cccccc
Confidence 2 234677
Q ss_pred eecCcccccccc--cccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCCC
Q 013220 258 VDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFA 314 (447)
Q Consensus 258 ~Dfg~a~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf~ 314 (447)
.||+.....+.. .....+++.++|||+..+..+..+.|.|++|+-..++.-|-.|-.
T Consensus 373 ~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 373 LDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 888877554433 345578999999999999999999999999987777777766543
No 463
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.63 E-value=0.00023 Score=79.05 Aligned_cols=207 Identities=19% Similarity=0.239 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Q 013220 78 AALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGL 156 (447)
Q Consensus 78 ~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL 156 (447)
....|++.+..+ .|+|++.++.+-....-.+-.+.+..++| ..++.+.+..- ..++....+.+..+.+.|+
T Consensus 228 ~~E~e~~~l~k~------~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL 299 (1351)
T KOG1035|consen 228 TTEIELESLSKI------AHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGL 299 (1351)
T ss_pred HHHHHHHHHHhh------ccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhH
Confidence 344456666666 67778777766443321222334455667 55666666543 2377888999999999999
Q ss_pred HHHHhhCCcccccCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhccc
Q 013220 157 DYLHRELGIIHTDLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASM 236 (447)
Q Consensus 157 ~~lH~~~gIiH~Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
+++|+. .+ .+..+...-.
T Consensus 300 ~~~h~~-~l-------~~v~L~~s~~------------------------------------------------------ 317 (1351)
T KOG1035|consen 300 AYLHSL-SL-------EHVVLSASSS------------------------------------------------------ 317 (1351)
T ss_pred HHHHHh-cc-------ceeEEecccc------------------------------------------------------
Confidence 999985 43 3344422100
Q ss_pred CCCCCCCCCccCCCcccceeEe--ecCcccccccccccC--CCCCCccChHHhhcCCCCc--cchhHhHHHHHHHHhhCC
Q 013220 237 GGIELPKPERCLDGIDMRCKVV--DFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSF--SVDMWSFACTAFELATGD 310 (447)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~kL~--Dfg~a~~~~~~~~~~--~gt~~y~aPE~l~~~~~~~--~~DiwSlGvil~~l~~g~ 310 (447)
+..+. +..+..... ||+.+.+........ ..+.-+.+||......+.. ..|+|.+|..+..+..|.
T Consensus 318 -------~~~~~-~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~ 389 (1351)
T KOG1035|consen 318 -------KESTV-DGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGE 389 (1351)
T ss_pred -------ccccc-CccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcC
Confidence 00000 122233333 777766554433222 3456778888887766554 479999999999998875
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchhHHhhhhcCCChhhHHHHHH
Q 013220 311 MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAE 390 (447)
Q Consensus 311 ~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 390 (447)
.+-.... .+..+ .+........+
T Consensus 390 ~i~~~~~--------------------~~~~~-------------------------------------l~~~~~~~~~d 412 (1351)
T KOG1035|consen 390 DISEKSA--------------------VPVSL-------------------------------------LDVLSTSELLD 412 (1351)
T ss_pred ccccccc--------------------chhhh-------------------------------------hccccchhhhh
Confidence 4321110 00000 00111115678
Q ss_pred HHhhccccCCCCCCChHHHhcCccccccc
Q 013220 391 FLVPLLDFTPEKRPTAQQCLQHPWLSLRN 419 (447)
Q Consensus 391 ll~~~L~~dP~kRpta~elL~hp~f~~~~ 419 (447)
++.+|+.-++++|+.+.++|.|||.+.--
T Consensus 413 ~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 413 ALPKCLDEDSEERLSALELLTHPFLRFPT 441 (1351)
T ss_pred hhhhhcchhhhhccchhhhhhchhccccc
Confidence 99999999999999999999999998643
No 464
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.43 E-value=0.00074 Score=60.41 Aligned_cols=113 Identities=24% Similarity=0.241 Sum_probs=71.7
Q ss_pred EEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEE
Q 013220 39 IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLC 118 (447)
Q Consensus 39 ~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~ 118 (447)
...+.||+|++|.||+|.+. +..+|+|+...+.. ...+..|.++|+.+..-. -.|-| |.+ ....
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~-r~~l~kEakiLeil~g~~--~~p~v---y~y--------g~~~ 88 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSP-RRNLEKEAKILEILAGEG--VTPEV---YFY--------GEDF 88 (201)
T ss_pred hhhhhhhcccccEEEEeecc--CceEEEEEecCCcc-hhhHHHHHHHHHHhhhcC--CCceE---EEe--------chhh
Confidence 45677999999999999764 56899998887654 678899999999996433 12222 222 2234
Q ss_pred EEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCC-CCCeEe
Q 013220 119 MVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLK-PENILL 177 (447)
Q Consensus 119 lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dik-p~Nill 177 (447)
+.|||. |-.|...... .+. .-...++++---|-. +||-|+.+. |..+++
T Consensus 89 i~me~i~G~~L~~~~~~-----~~r----k~l~~vlE~a~~LD~-~GI~H~El~~~~k~vl 139 (201)
T COG2112 89 IRMEYIDGRPLGKLEIG-----GDR----KHLLRVLEKAYKLDR-LGIEHGELSRPWKNVL 139 (201)
T ss_pred hhhhhhcCcchhhhhhc-----ccH----HHHHHHHHHHHHHHH-hccchhhhcCCceeEE
Confidence 559999 5566554321 122 223345555333444 599999886 344444
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.28 E-value=0.0023 Score=60.65 Aligned_cols=74 Identities=20% Similarity=0.106 Sum_probs=47.2
Q ss_pred eecccCc-eEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEE
Q 013220 43 KLGWGQF-SIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVL 121 (447)
Q Consensus 43 ~lG~G~~-g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvm 121 (447)
.|..|.+ +.||+.... +..+.+|+..... ......|+++++.+... .-+.+++..... ....++||
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-----~~vP~v~~~~~~----~~~~~lv~ 71 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-----LPVPEVIDYGSD----DGRAWLLT 71 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-----CCCCeEEEEEec----CCccEEEE
Confidence 4445555 789999643 4678889766543 34577899999999743 224444444332 23578999
Q ss_pred ecc-cccHH
Q 013220 122 EFL-GDSLL 129 (447)
Q Consensus 122 E~~-~~~L~ 129 (447)
|++ |..+.
T Consensus 72 e~i~G~~l~ 80 (244)
T cd05150 72 SAVPGVPAA 80 (244)
T ss_pred EeeCCccHh
Confidence 999 55554
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=97.25 E-value=0.0026 Score=71.24 Aligned_cols=83 Identities=19% Similarity=0.186 Sum_probs=51.0
Q ss_pred EEEeecccCceEEEEEEeCCCC--eEEEEEEechhH--HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTS--SYVALKIQKSAA--QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~--~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
-.++++.|.++.+|+......+ ..+++|...... .....+.+|.++++.+.... ..-|.+++..+.+.... .
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~---~vpVP~v~~~~~d~~v~-G 117 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHT---DVPVPKVYCLCTDASVI-G 117 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcC---CCCCCcEEEEecCCCcC-C
Confidence 4577899999999998765432 467777643321 22356889999999996211 11234444444332111 2
Q ss_pred eEEEEEecccc
Q 013220 116 HLCMVLEFLGD 126 (447)
Q Consensus 116 ~~~lvmE~~~~ 126 (447)
..++||||+.+
T Consensus 118 ~~flVME~v~G 128 (822)
T PLN02876 118 TAFYIMEYLEG 128 (822)
T ss_pred CceEEEEecCC
Confidence 46799999944
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.13 E-value=0.0047 Score=58.35 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=45.0
Q ss_pred EeecccCce-EEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEE
Q 013220 42 RKLGWGQFS-IVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMV 120 (447)
Q Consensus 42 ~~lG~G~~g-~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lv 120 (447)
+.|+.|+.. .||+.. ..+++|+..... ....+..|.++++.+........|.++ ...... ......+++
T Consensus 3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~-~~~~~~~E~~~l~~L~~~~~v~vP~~~---~~~~~~-~~~~~~~~l 72 (235)
T cd05155 3 EPVDSGGTDNATFRLG-----DDMSVRLPSAAG-YAGQVRKEQRWLPRLAPHLPLPVPEPL---GKGEPG-EGYPWPWSV 72 (235)
T ss_pred eeccCCCcccceEEcC-----CceEEEcCCccc-hHHHHHHHHHHHHHHhccCCCCCCcee---ecCCCc-cCCCcceEE
Confidence 567766665 599762 357789766532 345788999999999643112333332 221111 011245789
Q ss_pred Eecc-cccH
Q 013220 121 LEFL-GDSL 128 (447)
Q Consensus 121 mE~~-~~~L 128 (447)
|+++ |.++
T Consensus 73 ~~~i~G~~l 81 (235)
T cd05155 73 YRWLEGETA 81 (235)
T ss_pred EEeecCCCC
Confidence 9998 5444
No 468
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.13 E-value=0.0035 Score=62.26 Aligned_cols=130 Identities=22% Similarity=0.285 Sum_probs=84.2
Q ss_pred cccCCce-EEEEeecccCceEEEEEEeCCCCeEEEEEEechh-------HHh-------------------HH-HHHHHH
Q 013220 32 LFNGGRY-IAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-------AQF-------------------AQ-AALHEI 83 (447)
Q Consensus 32 ~~~~~~y-~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-------~~~-------------------~~-~~~~E~ 83 (447)
+++.|-+ .+..+|..|--+.||.|.. .+|..+|||+++.. ... .. =...|+
T Consensus 139 ll~RG~i~~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~ 217 (520)
T KOG2270|consen 139 LLNRGVIVEINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEM 217 (520)
T ss_pred HHhcCeeeecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHH
Confidence 4443333 4677889999999999974 45677999986531 111 11 123488
Q ss_pred HHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecccccHH--HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Q 013220 84 EVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLGDSLL--RLIKYSRYKGLELNKVREICKYILTGLDYLHR 161 (447)
Q Consensus 84 ~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~~~L~--~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~ 161 (447)
+-|.++.... |.-=-..+. ..-.|||+|+|.+-. ..+ ....++...+..+-.|++.-+.-|-+
T Consensus 218 RNLkRl~~aG------IP~PePIlL------k~hVLVM~FlGrdgw~aPkL---Kd~~ls~~ka~~~Y~~~v~~MR~lY~ 282 (520)
T KOG2270|consen 218 RNLKRLNNAG------IPCPEPILL------KNHVLVMEFLGRDGWAAPKL---KDASLSTSKARELYQQCVRIMRRLYQ 282 (520)
T ss_pred HHHHHHHhcC------CCCCCceee------ecceEeeeeccCCCCcCccc---ccccCChHHHHHHHHHHHHHHHHHHH
Confidence 8888885332 110011111 235699999964322 122 12346777888888888888888887
Q ss_pred hCCcccccCCCCCeEe
Q 013220 162 ELGIIHTDLKPENILL 177 (447)
Q Consensus 162 ~~gIiH~Dikp~Nill 177 (447)
.+++||.||.--|+|+
T Consensus 283 ~c~LVHADLSEfN~Ly 298 (520)
T KOG2270|consen 283 KCRLVHADLSEFNLLY 298 (520)
T ss_pred HhceeccchhhhhheE
Confidence 7899999999999998
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.88 E-value=0.027 Score=51.87 Aligned_cols=124 Identities=16% Similarity=0.197 Sum_probs=82.8
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechhH-----------------HhHHHHHHHHHHHHHhhcCCCCCcceeeeec
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSAA-----------------QFAQAALHEIEVLSAVADGDPSNEKCVIRLI 104 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~ 104 (447)
..||.|+.=.||.-- .....+||+..... .......+|+.....+.......+.+|.+++
T Consensus 7 ~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 357999999999763 23456889877655 2245677788877777623344788899999
Q ss_pred ccccccCCCcceEEEEEecc---c----ccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 105 DHFKHAGPNGQHLCMVLEFL---G----DSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 105 ~~~~~~~~~~~~~~lvmE~~---~----~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
+..... .-.-+|+|.+ . .+|.+++.. ..++. ..... +-.-..+|-++ +|+.+|++|.||++
T Consensus 84 G~veT~----~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~~---L~~f~~~l~~~-~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 84 GFVETN----LGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQA---LDEFKRYLLDH-HIVIRDLNPHNIVV 151 (199)
T ss_pred EEEecC----CceEEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHHH---HHHHHHHHHHc-CCeecCCCcccEEE
Confidence 987754 4567788876 2 246666643 23544 33332 23334577775 99999999999999
Q ss_pred eec
Q 013220 178 VST 180 (447)
Q Consensus 178 ~~~ 180 (447)
...
T Consensus 152 ~~~ 154 (199)
T PF10707_consen 152 QRR 154 (199)
T ss_pred Eec
Confidence 663
No 470
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.84 E-value=0.022 Score=58.16 Aligned_cols=76 Identities=24% Similarity=0.207 Sum_probs=51.4
Q ss_pred EEEeecccCceEEEEEEeCCCCeEEEEEEech------h--HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS------A--AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~------~--~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
-.+.||.|..+.||++.+...++.++||.... . ....+....|.+.|+.+..... ..+.+++.+-.
T Consensus 30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p---~~VPkV~~~D~--- 103 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVP---DLVPKVYHYDE--- 103 (401)
T ss_pred eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCC---CCCCeEEEECC---
Confidence 34689999999999998865446899996331 1 1234567789999998764322 23444454421
Q ss_pred CCcceEEEEEecc
Q 013220 112 PNGQHLCMVLEFL 124 (447)
Q Consensus 112 ~~~~~~~lvmE~~ 124 (447)
...++|||++
T Consensus 104 ---~~~~lVME~L 113 (401)
T PRK09550 104 ---ELAVTVMEDL 113 (401)
T ss_pred ---CCCEEEEecC
Confidence 4578999998
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=96.69 E-value=0.015 Score=54.65 Aligned_cols=74 Identities=11% Similarity=0.209 Sum_probs=45.7
Q ss_pred EEeecccCceEEEEEEeCC-CCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTR-TSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCM 119 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~l 119 (447)
.+.|..|-.+.+|+..... .+..|++|+........-...+|+++++.+..... .| +++..+. -.+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl--~P---~v~~~~~--------~~~ 69 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL--AP---KLYATFQ--------NGL 69 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC--CC---eEEEEeC--------CcE
Confidence 4567778889999996543 35678899766433222234579999999864331 23 3333221 137
Q ss_pred EEecc-ccc
Q 013220 120 VLEFL-GDS 127 (447)
Q Consensus 120 vmE~~-~~~ 127 (447)
+|||+ |.+
T Consensus 70 l~e~i~G~~ 78 (235)
T cd05157 70 IYEFIPGRT 78 (235)
T ss_pred EEEeeCCCc
Confidence 99998 543
No 472
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.62 E-value=0.006 Score=63.00 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=57.6
Q ss_pred ccchhHhHHHHHHHHhhCCCCCCCCCCCCCCCchHHHHHHHHHhCCCCHHhhhCCCCccchhcccchhhhhhhcccCchh
Q 013220 292 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD 371 (447)
Q Consensus 292 ~~~DiwSlGvil~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (447)
+|+||||+|.++.++.-|...+.... ....+..+.+ .+..+... .
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~------~s~~l~~i~k-~~~~d~~~----------------------------~ 154 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELT------ESEYLEILLK-YYTDDQEL----------------------------L 154 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHH------HHHHHHHHHH-hccCchhH----------------------------H
Confidence 49999999999999999977664331 1111111111 11111110 0
Q ss_pred HHhhhhcCCChhhHHHHHHHHhhccccCCCCCCChHHHhcCcccccc
Q 013220 372 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 418 (447)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~kRpta~elL~hp~f~~~ 418 (447)
.+.... .+-......+.+++.+|+-..|..||...++..++-|.+.
T Consensus 155 ~~a~e~-~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 155 STAMEH-LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred HHHHHH-HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 000000 1223445678899999999999999999999999999876
No 473
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.17 E-value=0.024 Score=55.33 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=47.5
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeeccccccc--CCCcceEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHA--GPNGQHLC 118 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~--~~~~~~~~ 118 (447)
.+.|..|....+|+.... +..+++|+... ........|+++++.+..... . +.+.+..-... ...+...+
T Consensus 19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~-~---vp~~i~~~~g~~~~~~~~~~~ 90 (296)
T cd05153 19 FEGISAGIENTNYFVTTD--SGRYVLTLFEK--VSAEELPFFLALLDHLAERGL-P---VPRPIADRDGEYLSELAGKPA 90 (296)
T ss_pred eecccCccccceEEEEeC--CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCC-C---CCccccCCCCcEeeeeCCceE
Confidence 556777888899998543 34688998764 234567789999999865421 1 33332211000 00123568
Q ss_pred EEEecc-ccc
Q 013220 119 MVLEFL-GDS 127 (447)
Q Consensus 119 lvmE~~-~~~ 127 (447)
+||+++ |..
T Consensus 91 ~l~~~i~G~~ 100 (296)
T cd05153 91 ALVEFLAGEH 100 (296)
T ss_pred EEEEeCCCCC
Confidence 999999 433
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.16 E-value=0.02 Score=54.74 Aligned_cols=69 Identities=16% Similarity=0.137 Sum_probs=42.7
Q ss_pred ecccCceEEEEEEeCCCCeEEEEEEechhHHhH-HHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEe
Q 013220 44 LGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFA-QAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLE 122 (447)
Q Consensus 44 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE 122 (447)
+..|-.+.+|+.. .++..+++|+........ -...+|.++++.+..... .|.++ ... .-++|||
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~--~P~~i---~~~--------~~~~v~e 68 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL--APKPI---LVN--------EHWLLVE 68 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC--CCceE---EEe--------CCEEEEE
Confidence 4567888999886 346678899765432211 235789999999975432 23333 211 1368999
Q ss_pred cc-ccc
Q 013220 123 FL-GDS 127 (447)
Q Consensus 123 ~~-~~~ 127 (447)
|+ |..
T Consensus 69 ~i~G~~ 74 (256)
T TIGR02721 69 WLEGEV 74 (256)
T ss_pred eccCcc
Confidence 99 533
No 475
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=95.75 E-value=0.093 Score=51.37 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=36.7
Q ss_pred EeecccCceEEEEEEeCC------CCeEEEEEEechhHHhHHHHHHHHHHHHHhhcC
Q 013220 42 RKLGWGQFSIVWLAYDTR------TSSYVALKIQKSAAQFAQAALHEIEVLSAVADG 92 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 92 (447)
+.|..|-...+|+..... .++.+++|+............+|.++++.+...
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~ 60 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER 60 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC
Confidence 456667778999986533 257899998776544345678899999998754
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=95.75 E-value=0.021 Score=52.22 Aligned_cols=85 Identities=19% Similarity=0.234 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEeccc-ccHHHHHHh-hccCCCCHHHHHHHHHHHHHHHH
Q 013220 80 LHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFLG-DSLLRLIKY-SRYKGLELNKVREICKYILTGLD 157 (447)
Q Consensus 80 ~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~~-~~L~~~~~~-~~~~~l~~~~~~~i~~qil~aL~ 157 (447)
.+|.-+++.+.+ ..++.+++|++-. .++.||.+ +.+...... ..+-..+......++.++++.+.
T Consensus 7 ~~E~lll~~l~~-----~~~~pk~lG~CG~--------~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~ 73 (188)
T PF12260_consen 7 NNEPLLLQLLQG-----SEPFPKLLGSCGR--------FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLE 73 (188)
T ss_pred ccHHHHHHHcCC-----CCCCCCeeeECCC--------EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence 458888999864 2479999998742 36779985 444311000 01122577888999999999999
Q ss_pred HHHh---hCCcccccCCCCCeEee
Q 013220 158 YLHR---ELGIIHTDLKPENILLV 178 (447)
Q Consensus 158 ~lH~---~~gIiH~Dikp~Nill~ 178 (447)
+++. . .+.-.|++|+|+.+.
T Consensus 74 ~l~~~~~~-~~~lcDv~~~nfgv~ 96 (188)
T PF12260_consen 74 ELDHGPLG-FFYLCDVSPDNFGVN 96 (188)
T ss_pred HHhcCCCC-cEEEeecchHHeEEe
Confidence 9987 3 455679999999994
No 477
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.75 E-value=0.1 Score=52.49 Aligned_cols=74 Identities=20% Similarity=0.234 Sum_probs=47.9
Q ss_pred EeecccCceEEEEEEeCCCCeEEEEEEechh--------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 42 RKLGWGQFSIVWLAYDTRTSSYVALKIQKSA--------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 42 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
++||.|.-..||++.+...++.|+||..... +...+...-|.+.|+......+. .+.++|.+ +
T Consensus 1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~---~vP~vy~~------D 71 (370)
T TIGR01767 1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPH---LVPRIFHF------D 71 (370)
T ss_pred CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCcc---ccCeEEEE------c
Confidence 3689999999999987544468999953211 23345667788888887643221 34443432 2
Q ss_pred cceEEEEEecc
Q 013220 114 GQHLCMVLEFL 124 (447)
Q Consensus 114 ~~~~~lvmE~~ 124 (447)
.....+|||++
T Consensus 72 ~e~~~~vMEdL 82 (370)
T TIGR01767 72 TEMAVTVMEDL 82 (370)
T ss_pred cccceehHhhC
Confidence 24567999998
No 478
>PRK05231 homoserine kinase; Provisional
Probab=95.59 E-value=0.26 Score=48.54 Aligned_cols=77 Identities=10% Similarity=0.024 Sum_probs=44.3
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc-cccccCCCcceEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLID-HFKHAGPNGQHLCM 119 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~-~~~~~~~~~~~~~l 119 (447)
.+.|+.|...++|+.... +..+++|+.. . ........|+++++.|..... ..|.++...+ ..... -+...++
T Consensus 27 ~~~l~~G~~n~~y~v~t~--~g~~vLK~~~-~-~~~~~l~~~~~~l~~L~~~gl-pvP~~i~~~~G~~~~~--~~g~~~~ 99 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT--QGEYVLTLFE-R-LTAEDLPFFLGLMQHLAARGV-PVPAPVARRDGAALGE--LAGKPAA 99 (319)
T ss_pred cchhccccccceEEEEeC--CCcEEEEEec-c-CChHHhHHHHHHHHHHHHCCC-CCCcceeCCCCCEeee--eCCEEEE
Confidence 345677887899998643 3368899875 1 223445567788888765432 2344433211 01000 1235789
Q ss_pred EEecc
Q 013220 120 VLEFL 124 (447)
Q Consensus 120 vmE~~ 124 (447)
+|+|+
T Consensus 100 l~~~l 104 (319)
T PRK05231 100 IVTFL 104 (319)
T ss_pred EEEec
Confidence 99998
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=95.53 E-value=0.013 Score=57.44 Aligned_cols=134 Identities=22% Similarity=0.331 Sum_probs=83.3
Q ss_pred CccccccCccccCC-ceEEEEeecccCceEEEEEEeCCCCeEEEEEEech----------hHH-------------hHHH
Q 013220 23 GYHAVRVGDLFNGG-RYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKS----------AAQ-------------FAQA 78 (447)
Q Consensus 23 ~~~~~~~g~~~~~~-~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~----------~~~-------------~~~~ 78 (447)
||-.+.+-.+.+.+ -+.+.++||-|.-+.||.+-+ ..|.+.++|+-.. ... +.-.
T Consensus 78 GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRla 156 (465)
T KOG2268|consen 78 GYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLA 156 (465)
T ss_pred cchHHHHHHHHhcchhhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHH
Confidence 44444444455533 578999999999999999975 3577888885211 110 1113
Q ss_pred HHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Q 013220 79 ALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLD 157 (447)
Q Consensus 79 ~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~ 157 (447)
..+|...|+.|.... --|.+-++ ...-++|||++ |..|..+-. ...+..+...+..-+-
T Consensus 157 a~kEfafmkaL~e~g----fpVPkpiD--------~~RH~Vvmelv~g~Pl~~v~~--------v~d~~~ly~~lm~~Iv 216 (465)
T KOG2268|consen 157 ATKEFAFMKALYERG----FPVPKPID--------HNRHCVVMELVDGYPLRQVRH--------VEDPPTLYDDLMGLIV 216 (465)
T ss_pred HHHHHHHHHHHHHcC----CCCCCccc--------ccceeeHHHhhcccceeeeee--------cCChHHHHHHHHHHHH
Confidence 456888888885321 01222222 24567999999 655654321 1123344455555566
Q ss_pred HHHhhCCcccccCCCCCeEee
Q 013220 158 YLHRELGIIHTDLKPENILLV 178 (447)
Q Consensus 158 ~lH~~~gIiH~Dikp~Nill~ 178 (447)
-|-.+ |+||+|.+-=||++.
T Consensus 217 ~la~~-GlIHgDFNEFNimv~ 236 (465)
T KOG2268|consen 217 RLANH-GLIHGDFNEFNIMVK 236 (465)
T ss_pred HHHHc-CceecccchheeEEe
Confidence 67776 999999999999993
No 480
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=95.49 E-value=0.0089 Score=68.69 Aligned_cols=144 Identities=11% Similarity=0.022 Sum_probs=100.4
Q ss_pred CcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhhCC----cccc
Q 013220 96 NEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYK--GLELNKVREICKYILTGLDYLHRELG----IIHT 168 (447)
Q Consensus 96 ~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~--~l~~~~~~~i~~qil~aL~~lH~~~g----IiH~ 168 (447)
.|+++.......... +....|..|+++ +|.+++.+..+-.+ ...+.-+-....+.+.+..-+|+..+ -+|+
T Consensus 1287 ~h~~~~~~p~rI~ps--~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~ 1364 (2724)
T KOG1826|consen 1287 KHYLTEVDPLRIPPS--ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSK 1364 (2724)
T ss_pred hceeeecccccCCCC--CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhh
Confidence 667777666655544 445788999999 99999988754322 23333333333333666666665324 3688
Q ss_pred cCCCCCeEeeecCCCCCCcccCCCCCCcCCCCCCCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCccC
Q 013220 169 DLKPENILLVSTIDPSKDPIRSGLTPILERPEGSINGGSTSTMTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCL 248 (447)
Q Consensus 169 Dikp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (447)
++|+-|.++
T Consensus 1365 ~Lkf~lpmI----------------------------------------------------------------------- 1373 (2724)
T KOG1826|consen 1365 SLKFTLPMI----------------------------------------------------------------------- 1373 (2724)
T ss_pred hhhhhccce-----------------------------------------------------------------------
Confidence 999999988
Q ss_pred CCcccceeEeecCccccccc---ccccCCCCCCccChHHhhcCCCCccchhHhHHHHHHHHhhCCCCC
Q 013220 249 DGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 313 (447)
Q Consensus 249 ~~~~~~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~DiwSlGvil~~l~~g~~Pf 313 (447)
..+.++++.++|+.+.... ...-.++++.|++|+....-.++.++|+|+.|+-+|..-.|..+|
T Consensus 1374 -Vtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1374 -VTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred -ecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 3356789999999873322 233347788999999988878888899999999999887776554
No 481
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.45 E-value=0.11 Score=52.86 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=50.7
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechh-------HHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSA-------AQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
.+.||.|.-..||++.+...+..|+||..... ....+...-|.++|+.+....+. .+.++|.+ +
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~---~VP~vy~~------D 104 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPG---LVPKVYLF------D 104 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCC---cCCeEEEE------C
Confidence 67899999999999987544678999952211 23456677899999988653321 24444433 2
Q ss_pred cceEEEEEecc
Q 013220 114 GQHLCMVLEFL 124 (447)
Q Consensus 114 ~~~~~lvmE~~ 124 (447)
.....+|||++
T Consensus 105 ~e~~~~vMEdL 115 (409)
T PRK12396 105 SVMNCCVMEDL 115 (409)
T ss_pred cHHhhHHHHhC
Confidence 35677999988
No 482
>PRK10593 hypothetical protein; Provisional
Probab=95.29 E-value=0.13 Score=50.51 Aligned_cols=110 Identities=18% Similarity=0.172 Sum_probs=71.4
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
-.-.+.||.|..+.||+..... ..+.+|+.+.. .....+..|.+.|+.+..... ..|.++++.+.... .....
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~--~~~~~k~~~~~-~~~~~~~~Ea~~L~~L~~~~~---vpVP~V~~~~~~~~-~~g~~ 88 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQ--GNPMPLMARSF-STPGVAQQEAWKLSMLARSGT---VRMPTVYGVMTHEQ-SPGPD 88 (297)
T ss_pred hheeeecCCccceeEEEEEcCC--CCEEEEEeccc-ccchHHHHHHHHHHHHccCCC---CCcCcEEEEeccCC-cCCCe
Confidence 3446679999999999985432 24677875431 134588999999999975422 23445555443211 22458
Q ss_pred EEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Q 013220 118 CMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161 (447)
Q Consensus 118 ~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~ 161 (447)
++|||++ |..+.+. ..+......+..+++.+|+-||+
T Consensus 89 ~LVmE~i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~ 126 (297)
T PRK10593 89 VLLLERLRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHR 126 (297)
T ss_pred EEEEeccCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999999 5555431 12333455667788899999997
No 483
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=95.06 E-value=0.3 Score=48.01 Aligned_cols=79 Identities=11% Similarity=0.034 Sum_probs=44.8
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEE
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMV 120 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lv 120 (447)
.+.++.|....+|+.... +..+++|+..... .......|+++++.|..... ..|.++....-..... .....+++
T Consensus 27 i~~~~~G~~n~~y~v~t~--~~~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~-pvp~~i~t~~g~~~~~-~~g~~~~l 101 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTD--VGRYILTLYEKRV-KAEELPFFLALTTHLAARGL-PVPKPVKSRDGRQLST-LAGKPACL 101 (307)
T ss_pred ccccCCccccceEEEEeC--CCcEEEEEecCCC-CHHHHHHHHHHHHHHHHCCC-CCCccccCCCCCeehh-cCCeEEEE
Confidence 556777777899998643 3367889765421 13455677888888865432 2333333211100000 12357899
Q ss_pred Eecc
Q 013220 121 LEFL 124 (447)
Q Consensus 121 mE~~ 124 (447)
|+|+
T Consensus 102 ~e~i 105 (307)
T TIGR00938 102 VEFL 105 (307)
T ss_pred EEeC
Confidence 9998
No 484
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.79 E-value=0.43 Score=48.85 Aligned_cols=75 Identities=15% Similarity=0.180 Sum_probs=48.8
Q ss_pred EEEeecccCceEEEEEEeCCCCeEEEEEEec-----hhH---HhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccC
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTSSYVALKIQK-----SAA---QFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAG 111 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~-----~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~ 111 (447)
-.+.||.|.-..||+..+ .+..|+||... ..+ ........|.+.|+.+..... ..|.+++.+..
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p---~~VPkVy~~de--- 107 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCP---DHVPEVYHFDR--- 107 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCC---CCCCeEEEECC---
Confidence 477899999999999976 34568999644 111 134455667888877754322 24555555543
Q ss_pred CCcceEEEEEeccc
Q 013220 112 PNGQHLCMVLEFLG 125 (447)
Q Consensus 112 ~~~~~~~lvmE~~~ 125 (447)
+..+++||++.
T Consensus 108 ---d~~vlvME~L~ 118 (418)
T PLN02756 108 ---TMALIGMRYLE 118 (418)
T ss_pred ---CCCEEEEeecC
Confidence 34678899993
No 485
>PLN02236 choline kinase
Probab=94.46 E-value=0.23 Score=49.81 Aligned_cols=56 Identities=11% Similarity=-0.008 Sum_probs=36.5
Q ss_pred ceEEEEeecccCceEEEEEEeCC----CCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTR----TSSYVALKIQKSAAQFAQAALHEIEVLSAVADGD 93 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~----~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 93 (447)
...+. .|-.|-+..+|++.... +++.|++|+........-.-..|.++++.+....
T Consensus 38 ~~~i~-~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~g 97 (344)
T PLN02236 38 ALQVI-PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHG 97 (344)
T ss_pred cEEEE-EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcC
Confidence 44444 55458889999986432 3468999987654322223467999999987543
No 486
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=94.36 E-value=0.45 Score=46.20 Aligned_cols=45 Identities=22% Similarity=0.125 Sum_probs=31.3
Q ss_pred cccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhc
Q 013220 45 GWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVAD 91 (447)
Q Consensus 45 G~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~ 91 (447)
++|-...|+... ...+..+++|+.+... ......+|.++|+.+..
T Consensus 20 ~~g~~~~v~~i~-~~~g~~~VlR~p~~~~-~~~~l~rE~~vL~~L~~ 64 (276)
T cd05152 20 ESGLDFQVVFAK-DTDGVPWVLRIPRRPD-VSERAAAEKRVLALVRK 64 (276)
T ss_pred CCcceeEEEEEE-cCCCCeEEEEecCCHH-HHHHHHHHHHHHHHHHh
Confidence 555556677663 2346789999886433 24567899999999975
No 487
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=94.22 E-value=0.18 Score=50.41 Aligned_cols=71 Identities=17% Similarity=0.121 Sum_probs=50.5
Q ss_pred eeecccccccCCCcceEEEEEecccccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccccCCCCCeEe
Q 013220 101 IRLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHRELGIIHTDLKPENILL 177 (447)
Q Consensus 101 v~~~~~~~~~~~~~~~~~lvmE~~~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~gIiH~Dikp~Nill 177 (447)
+.+...+.....++.+.|++|++.|+.+... . -...+++..++.+.+.-+.-+..++..=|||+..+||++
T Consensus 285 ~~~e~~~vv~~de~~y~yl~~kdhgt~is~i-k-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI 355 (488)
T COG5072 285 VFLETLKVVSLDETLYLYLHFKDHGTPISII-K-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI 355 (488)
T ss_pred hhhhcceEEecCCceEEEEEEecCCceeeee-e-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee
Confidence 3333333333345679999999988776432 1 134567778888888877777777778899999999999
No 488
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=93.31 E-value=0.7 Score=45.74 Aligned_cols=80 Identities=18% Similarity=0.105 Sum_probs=45.6
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEec--hhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcc
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQK--SAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQ 115 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~ 115 (447)
..+.+.+-.|....+|...+. ++.++++... ..........+|+++++.+.... .-+...++.+.... -.
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~----vP~p~~~~~~~~~~--~g 98 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGDT--GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVD----VPVPRAFGLCGEGY--LG 98 (321)
T ss_pred CceeeeccCCcccceEEEecC--CceEEEecCCccccchhhhHHHhHHHHHHHhcCCC----CCCcccccccccCC--CC
Confidence 345555544444556666443 7788888332 22345667888999999986431 11222333333221 13
Q ss_pred eEEEEEeccc
Q 013220 116 HLCMVLEFLG 125 (447)
Q Consensus 116 ~~~lvmE~~~ 125 (447)
..+.||+++.
T Consensus 99 ~pf~v~~~ve 108 (321)
T COG3173 99 TPFYVMEWVE 108 (321)
T ss_pred CceEEEEEec
Confidence 6789999993
No 489
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=92.64 E-value=0.84 Score=44.61 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=46.9
Q ss_pred eEEEEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceE
Q 013220 38 YIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHL 117 (447)
Q Consensus 38 y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~ 117 (447)
-+-.+.++.|..+.+|+.. .+++.+.+|+-. ......+..|.+-|+.|....... +.+.+...... +..
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~---vP~vi~~G~~~----~~~ 87 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANPIR---VPKVIAWGEYD----DDA 87 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSB---S--EEEEEE-S----SCC
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCCCC---CCeEEEEEeec----CCc
Confidence 3455668889999999986 567789999766 333567899999999996554334 44444443322 334
Q ss_pred EEEEecc
Q 013220 118 CMVLEFL 124 (447)
Q Consensus 118 ~lvmE~~ 124 (447)
++||||+
T Consensus 88 fLlle~l 94 (288)
T PF03881_consen 88 FLLLEFL 94 (288)
T ss_dssp EEEEE--
T ss_pred eEEEEee
Confidence 8999998
No 490
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=92.25 E-value=0.85 Score=45.46 Aligned_cols=56 Identities=9% Similarity=0.190 Sum_probs=35.8
Q ss_pred ceEEEEeecccCceEEEEEEeCCC---CeEEEEEEechhHHhHHHHHHHHHHHHHhhcCC
Q 013220 37 RYIAQRKLGWGQFSIVWLAYDTRT---SSYVALKIQKSAAQFAQAALHEIEVLSAVADGD 93 (447)
Q Consensus 37 ~y~l~~~lG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 93 (447)
...+....| |-+..+|+...... ...|++|+........-.-.+|.++++.+....
T Consensus 16 ~i~i~~l~g-GlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~g 74 (330)
T PLN02421 16 DFSVERISG-GITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAG 74 (330)
T ss_pred ceEEEEeCC-cccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcC
Confidence 445544444 88889999864332 247899987654332233467899999987543
No 491
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=92.20 E-value=0.46 Score=44.45 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHH
Q 013220 76 AQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILT 154 (447)
Q Consensus 76 ~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~ 154 (447)
...++++.+++.+++ +|+++.. .++...-++.|+| ..... . ..++.-=+.
T Consensus 102 ~~~y~nky~v~Armh--------GilrL~N------Dn~~~yGvIlE~Cy~~~i~-----------~----~N~i~agi~ 152 (308)
T PF07387_consen 102 DALYFNKYRVFARMH--------GILRLKN------DNNYKYGVILERCYKIKIN-----------F----SNFITAGIK 152 (308)
T ss_pred hhhhhhhhhHHHHhh--------heeEeec------CCCceeEEEEeeccCcccc-----------h----hHHHHHhHH
Confidence 456788899999885 2666552 2566788999999 33221 0 011111134
Q ss_pred HHHHHH-hhCCcccccCCCCCeEe
Q 013220 155 GLDYLH-RELGIIHTDLKPENILL 177 (447)
Q Consensus 155 aL~~lH-~~~gIiH~Dikp~Nill 177 (447)
+|.-.| ++.+.+|||..|+|||-
T Consensus 153 ~L~~fH~~~~~~lHGD~np~NiM~ 176 (308)
T PF07387_consen 153 DLMDFHSENQHCLHGDCNPDNIMC 176 (308)
T ss_pred HHHHhhccCCCeecCCCChhheee
Confidence 677788 34589999999999998
No 492
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=92.07 E-value=0.62 Score=47.39 Aligned_cols=59 Identities=27% Similarity=0.445 Sum_probs=40.1
Q ss_pred EEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-hhCCcccccCCCCCeEeee
Q 013220 117 LCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLH-RELGIIHTDLKPENILLVS 179 (447)
Q Consensus 117 ~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH-~~~gIiH~Dikp~Nill~~ 179 (447)
..++-+|. |-.+..++... +.+++..+.++.-...|+-.|- -. +.+|.|+.|.||++.-
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~---~~pe~l~kkva~lg~~AllkMl~vD-NFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWK---SQPEALVKKVAKLGVNALLKMLIVD-NFVHADLHPGNVLIRF 380 (565)
T ss_pred ceeeeeccccccHHhhhhcc---cChHHHHHHHHHHHHHHHHHHHHhh-cceecccCCCcEEEEe
Confidence 45565666 77888887643 2455555666666666655433 33 8999999999999954
No 493
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=90.67 E-value=3.1 Score=41.50 Aligned_cols=82 Identities=17% Similarity=0.151 Sum_probs=47.4
Q ss_pred eecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCC-CcceeeeecccccccCCCcceEEEEE
Q 013220 43 KLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPS-NEKCVIRLIDHFKHAGPNGQHLCMVL 121 (447)
Q Consensus 43 ~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~-~~~~Iv~~~~~~~~~~~~~~~~~lvm 121 (447)
.|.+ .-..||+.+... ..+++|+.... .....+.-|++.++-|....+. --| |...=+.....-.++.+..-++
T Consensus 33 ~l~s-~eN~~f~~~~~~--g~~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf 107 (331)
T COG2334 33 GLNS-EENSNFRVQTED--GRYILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALF 107 (331)
T ss_pred cccc-ccCceEEEEecC--CCeEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEE
Confidence 3444 456788886543 33499998887 6677888899999998754321 111 2222222221111113677888
Q ss_pred ecc-cccHH
Q 013220 122 EFL-GDSLL 129 (447)
Q Consensus 122 E~~-~~~L~ 129 (447)
+|+ |..+.
T Consensus 108 ~~l~G~~~~ 116 (331)
T COG2334 108 EYLPGRPLE 116 (331)
T ss_pred EecCCcCcC
Confidence 998 43343
No 494
>PRK11768 serine/threonine protein kinase; Provisional
Probab=89.09 E-value=7.8 Score=38.44 Aligned_cols=45 Identities=16% Similarity=0.052 Sum_probs=31.9
Q ss_pred cCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcC
Q 013220 47 GQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADG 92 (447)
Q Consensus 47 G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~ 92 (447)
+.-..||+... ..+..+++|+..........+..|++.+..|...
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~ 80 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEA 80 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC
Confidence 44467888864 3456799998865444566788899999888653
No 495
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=85.07 E-value=0.56 Score=39.37 Aligned_cols=46 Identities=17% Similarity=0.209 Sum_probs=35.8
Q ss_pred EEeecccCceEEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHh
Q 013220 41 QRKLGWGQFSIVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAV 89 (447)
Q Consensus 41 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l 89 (447)
.+.||.|+-|.||+|+... |+.||||+.+.... +.+...+++++.+
T Consensus 16 ~~PlasASiaQVh~a~l~~-g~~VaVKV~rP~i~--~~i~~Dl~~l~~~ 61 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKD-GEEVAVKVQRPGIE--EQIEADLRILRRL 61 (119)
T ss_pred cchhhheehhhheeeeecc-cchhhhhhcchHHH--HHHHHHHHHHHHH
Confidence 3569999999999998644 89999998876543 5566677777766
No 496
>PTZ00384 choline kinase; Provisional
Probab=84.90 E-value=6.4 Score=40.11 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=40.2
Q ss_pred EEEeecccCceEEEEEEeCCCC------eEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCCC
Q 013220 40 AQRKLGWGQFSIVWLAYDTRTS------SYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGPN 113 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~~~------~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~~ 113 (447)
-.+.|..|-.+.+|++...... +.|++++........-.-..|+++++.+.... .-.++++.|.
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~g-----lgP~l~~~f~----- 123 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNN-----FGPKIIGRFG----- 123 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCC-----CCCeEEEecC-----
Confidence 3445555899999999643321 22555543222111223456889999986432 2233444442
Q ss_pred cceEEEEEecc
Q 013220 114 GQHLCMVLEFL 124 (447)
Q Consensus 114 ~~~~~lvmE~~ 124 (447)
-+++.||+
T Consensus 124 ---~g~l~efI 131 (383)
T PTZ00384 124 ---DFTIQEWV 131 (383)
T ss_pred ---CEEEEEEe
Confidence 35888988
No 497
>PTZ00296 choline kinase; Provisional
Probab=81.69 E-value=11 Score=39.29 Aligned_cols=54 Identities=11% Similarity=0.046 Sum_probs=36.5
Q ss_pred EEEeecccCceEEEEEEeCC--------CCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCC
Q 013220 40 AQRKLGWGQFSIVWLAYDTR--------TSSYVALKIQKSAAQFAQAALHEIEVLSAVADGD 93 (447)
Q Consensus 40 l~~~lG~G~~g~Vy~a~~~~--------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~ 93 (447)
-.+.|..|-...+|++.... .++.|++|+........-.-..|.++++.+....
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~g 170 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYR 170 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCC
Confidence 45566668888999986432 1468999987655433334567888888886543
No 498
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=80.01 E-value=3.2 Score=40.45 Aligned_cols=66 Identities=14% Similarity=0.111 Sum_probs=36.5
Q ss_pred EEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecc-cccccCCCcceEEEEEecc
Q 013220 51 IVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLID-HFKHAGPNGQHLCMVLEFL 124 (447)
Q Consensus 51 ~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~-~~~~~~~~~~~~~lvmE~~ 124 (447)
.||+.... +..+++|+.... ......|++++..|..... .-|.++...+ .+... .+...+++++++
T Consensus 11 ~v~~v~t~--~g~~~LK~~~~~---~~~~~~~~~~~~~L~~~g~-~vp~~i~t~~g~~~~~--~~~~~~~l~~~i 77 (313)
T TIGR02906 11 NVYKVETD--SGNKCLKKINYP---PERLLFILGAQEHLRKNGF-NIPKILKTKDGELYVK--YNGDLYVLTEWI 77 (313)
T ss_pred cEEEEEeC--CCCeEEEEcCCC---HHHHHHHHHHHHHHHHcCC-CCCceeecCCCCEEEE--ECCEEEEEehhc
Confidence 38888642 336889977533 2345667888888765432 3233333211 11111 134688999998
No 499
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=75.01 E-value=0.73 Score=47.83 Aligned_cols=71 Identities=20% Similarity=0.299 Sum_probs=55.0
Q ss_pred CceEEEEeecccCceEEEEEEeCCCCeEEEEEEe--chhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccccCC
Q 013220 36 GRYIAQRKLGWGQFSIVWLAYDTRTSSYVALKIQ--KSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKHAGP 112 (447)
Q Consensus 36 ~~y~l~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~~~~ 112 (447)
..|.....+|.|+||+|+.+.....+..+|||.+ +..........+|..-+.++ .|++++.+.-.|....+
T Consensus 49 ~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~f------eh~g~~~~~ha~~~~~~ 121 (516)
T KOG1033|consen 49 NDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEF------EHPGIKRYFHAWYERPP 121 (516)
T ss_pred ccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhh------cccchhhheeceecCCC
Confidence 4588999999999999999998888888999954 34444455666677777776 88889988888876544
No 500
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=74.95 E-value=28 Score=32.90 Aligned_cols=109 Identities=20% Similarity=0.221 Sum_probs=60.6
Q ss_pred ccccCCceEEEEeecccCce-EEEEEEeCCCCeEEEEEEechhHHhHHHHHHHHHHHHHhhcCCCCCcceeeeecccccc
Q 013220 31 DLFNGGRYIAQRKLGWGQFS-IVWLAYDTRTSSYVALKIQKSAAQFAQAALHEIEVLSAVADGDPSNEKCVIRLIDHFKH 109 (447)
Q Consensus 31 ~~~~~~~y~l~~~lG~G~~g-~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~Iv~~~~~~~~ 109 (447)
.++++-++. .+..|..| +||+-........ -+|+.... ....+..|.+.++.+....+ ..|.|+.+.+
T Consensus 16 ~l~~g~~w~---~v~~geS~~~v~rl~a~~r~g~-~~k~~~~~--~~a~L~~Ea~RlrWla~~~l-~~P~V~~~~~---- 84 (266)
T COG3231 16 RLLSGRRWR---RVTEGESGAGVFRLFADSRPGL-YLKIASSG--PAAELEGEAARLRWLAGQGL-GCPRVLGLED---- 84 (266)
T ss_pred HhccCCccc---eeeccCCCCeEEEEeccCCCce-EEEEecCc--chhhhhhHHHHHHHhcccCC-CCCceEeecc----
Confidence 344443343 44555554 7887533322223 34433222 23568889999999975432 5666665444
Q ss_pred cCCCcceEEEEEecc-cccHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Q 013220 110 AGPNGQHLCMVLEFL-GDSLLRLIKYSRYKGLELNKVREICKYILTGLDYLHR 161 (447)
Q Consensus 110 ~~~~~~~~~lvmE~~-~~~L~~~~~~~~~~~l~~~~~~~i~~qil~aL~~lH~ 161 (447)
.+.+-|++|+-+ |.++...-. .++.+ ..+--|+.+|..||.
T Consensus 85 ---~~~~~wLl~salpG~~~s~~~~-----~~~p~---r~v~~la~aLR~LH~ 126 (266)
T COG3231 85 ---DADQAWLLMSALPGEDASHPRY-----ALDPK---RAVPLLAEALRRLHE 126 (266)
T ss_pred ---CcchhHHhhhhcCCCcccchhh-----cCCHH---HHHHHHHHHHHHHhc
Confidence 346789999998 555433211 13333 334446777888886
Done!