BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013221
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1
Length = 427
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 182/435 (41%), Gaps = 54/435 (12%)
Query: 14 IVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWW 73
++QV++I++ G A+ LL +++ ++ + +FTP L+F+ LAK++++ +I
Sbjct: 18 VLQVVIIALAGFWSASS--GLLPKQSQKIISLLNVDLFTPCLIFSKLAKSLSMAKIFEIA 75
Query: 74 FMPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNL-------LLIIVPA 126
+P+ +T I I G I+ ++L V+A GN +L L +P
Sbjct: 76 IIPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPN 135
Query: 127 ICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSY-QLIKQSSVRYKALAQAAEPE 185
+ +Q P NRD +S G+ Y +G WS+ Y +L+K S Q P
Sbjct: 136 LTWDQ-IPNDNRDNVASRGILYLLIFQQIGQMLRWSWGYNKLMKWSGEN----TQHMPPS 190
Query: 186 EVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKES 245
+V Q+ L R D E++ + + E + + +
Sbjct: 191 QV------------QSLLERTPNIDNEELVNEEQEEQELLEEENNRMNSSFLSSSSIGDK 238
Query: 246 FWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWL-RNLIIGDSAPLRVIQDSIEILGY 304
W++S ++ L PP + I + A+ L R L + D +++ LG
Sbjct: 239 IWQKSCTVFERIRAN-LNPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQLGS 297
Query: 305 VFVSAQFYCFVGWLATSSFSYCRDGTIPCITLILG---GNLIQGLRSSTLKPLIIIAVVC 361
V + L S+ + + T+ L++G G +I L S L P+I IA
Sbjct: 298 VSIPLILVVLGSNLYPSAEVFPK--TVHHSKLLIGSIIGRMI--LPSCFLLPIIAIA--- 350
Query: 362 VRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECS 421
V+YI + + DP++ V + PPA+ + +TQL + + E +
Sbjct: 351 VKYINVSIL---------------DDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMA 395
Query: 422 VLFLWTYLVAALALT 436
+ W Y V +L ++
Sbjct: 396 DILFWGYAVLSLPVS 410
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/443 (18%), Positives = 171/443 (38%), Gaps = 62/443 (13%)
Query: 15 VQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWWF 74
++V++I++ G ++A + L DA++ ++ + FTP L+F + + L+ +I
Sbjct: 24 LEVIVIALGGYVLAKK--GFLPRDAQKVISSLNVYFFTPCLVFEKVGNGLNLKMLIDLSL 81
Query: 75 MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGS- 133
+PV + ++ +++ KL R P A N +L L +V ++
Sbjct: 82 LPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPLALVSSLATTVKDL 141
Query: 134 -----PFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSS-------VRYKALAQA 181
P D +S G+ Y LG WSY Y+++ + + ++ + +
Sbjct: 142 LWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRILLSPNQPEDPLPIGNRSWSHS 201
Query: 182 AEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQT 241
EE E+ ++A ++ + E +V S+ S + Q+ + S+ +
Sbjct: 202 DVNEE---EIQNLLASSANVDGVQNSVQANEGSTVQTDSSAISKNDNVQV---ETSNEEV 255
Query: 242 RKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEI 301
+ LL + +PP + + V L+ + +
Sbjct: 256 GGFGAASSKISKFIVLLLDFFSPPLYSLFIALFIAVVPPLQRFFFEEGS----------- 304
Query: 302 LGYVFVSAQFYCFVGWLATSSFSYCRDGTIPCITLILGGNL---------IQGLRSSTLK 352
FV TS +P I ++LG +L Q +R +
Sbjct: 305 ------------FVEGSITSGIRMAGQVAVPMILVVLGASLATDISKTEPTQEVRKNNDT 352
Query: 353 PLIIIAVVCVRYIALPFIGVWVVKAAAALGFLP-----SDPLYHYVLMVQFTLPPAMNIG 407
+II+ ++ R + +P ++ A + L + DP++ V+ + P A+ +
Sbjct: 353 RVIIVCLLG-RMVVVPLA---LLPAFSLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQLT 408
Query: 408 TMTQLFDVAQEECSVLFLWTYLV 430
+ QL V + EC+ + W+Y V
Sbjct: 409 QICQLNGVFERECAKVLWWSYAV 431
>sp|P53932|YNJ5_YEAST Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL095C PE=1 SV=1
Length = 642
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 17/229 (7%)
Query: 9 VASMPIVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEE 68
V+ PI+++ LI +G LMA +LT +A R ++ +V TV PSL F + + ++
Sbjct: 12 VSVKPIIKIYLIIGVGFLMAKM--GILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKD 69
Query: 69 IISWWFMPVNVAMTFLIGGILGWIVVKLLRPKPHL-EGLVIATCASGNLGNLLLIIVPAI 127
I S + ++ + F G + VV+L P P G ++A N+ +L + + ++
Sbjct: 70 IKSVGIICLSALLIFGSGFFFAY-VVRLFLPVPKQWYGGILAGGMFPNISDLPIAYLQSM 128
Query: 128 CHEQGSPFGNRDVCSSVGLSYASFSM------ALGGFFIWSYSYQLIKQSSVRYKALAQA 181
+QG F + V +M LGGF + ++ S +
Sbjct: 129 --DQGLVFSEEEGNKGVANVIIFLTMFLICIFNLGGFRLIESDFEYNDDESAVRVSETTK 186
Query: 182 AEPEEVPKEVNKD----FDANAQTQLLRGTTDDQEDVSVLVASTKSSSD 226
+P N D F +N Q QL ++ ++ + + ++D
Sbjct: 187 TQPAVSANTTNTDTSERFFSNEQ-QLFNNKYTARDSLTEAIGTKGENAD 234
>sp|Q58437|Y1031_METJA Uncharacterized transporter MJ1031 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1031 PE=3 SV=1
Length = 308
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 29 TQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWWFMPVNVAMTFLIGGI 88
++ + +L + + LN +V + PS +F +++K V+ +I+ + +PV + + L GI
Sbjct: 20 SKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGI 79
Query: 89 LGWIVVK-LLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQG 132
L +++ K + + K G +I GN G L + + E+G
Sbjct: 80 LAYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMFGEEG 124
>sp|Q99252|ECM3_YEAST Protein ECM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ECM3 PE=1 SV=1
Length = 613
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 26/244 (10%)
Query: 13 PIVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISW 72
PI+++ LI +G N+LT A RS++ +V T+ P L F + + +I
Sbjct: 16 PIIKIYLI--IGVGFGLCKMNILTVQATRSISDIVLTILLPCLSFNKIVANIEDNDIKDV 73
Query: 73 WFMPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQG 132
+ + + F G +IV +L G ++A N+ +L + + ++ +QG
Sbjct: 74 GIICLTSVILFATGLGFAFIVRSVLPVPKRWRGGILAGGMFPNISDLPIAYLQSM--DQG 131
Query: 133 SPFGNRDVCSSVGLSYASFSMALGGFFIWSYS---YQLIKQSSVRYKALAQAAEPEEVPK 189
F + V A+ + L F I ++ ++LI ++ YK + EE
Sbjct: 132 FIFTEAEGEKGV----ANVIIFLAMFLICVFNLGGFRLI-ENDFHYK----GDDDEE--N 180
Query: 190 EVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKR 249
+ D A TQ + G + + +L +S+ VP +S E K
Sbjct: 181 TLTNDDSAQQPTQPIEGNSSSSSNQDILKEPNEST--------VPNSSQASYISEKNKKE 232
Query: 250 SLEF 253
E
Sbjct: 233 KTEL 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,589,629
Number of Sequences: 539616
Number of extensions: 6026372
Number of successful extensions: 18934
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 18920
Number of HSP's gapped (non-prelim): 24
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)