Your job contains 1 sequence.
>013226
MGSHELIHRSQTSQTQDQIIGLDSSPRPSKSVKSFRNPVQYVLRSQRLIFLFIGIAISSL
IFSKLPVRQHQIANPAPLTTSETTHLSRRRVLYEAAEVQHVNAGGKVPLGLQRKSLRILV
TGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPILLEV
DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHP
QAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRV
VSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLE
LAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRH
RIFGDQKEAGGGGGGGDATSSSMYSAN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013226
(447 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 1662 5.6e-171 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 1224 1.5e-124 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 1224 1.5e-124 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 1208 7.2e-123 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 1042 2.8e-105 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 1037 9.5e-105 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 1037 9.5e-105 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 1037 9.5e-105 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 1037 9.5e-105 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 1037 9.5e-105 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 1037 9.5e-105 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 1035 1.6e-104 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 1035 1.6e-104 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 1033 2.5e-104 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 1020 6.0e-103 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 1017 1.3e-102 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 960 1.4e-96 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 602 1.2e-58 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 522 3.6e-50 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 487 1.8e-46 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 487 1.8e-46 1
UNIPROTKB|C9JFU6 - symbol:UXS1 "UDP-glucuronic acid decar... 469 1.5e-44 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 422 1.4e-39 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 371 3.6e-34 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 358 8.5e-33 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 349 7.7e-32 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 349 7.7e-32 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 332 4.9e-30 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 318 1.5e-28 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 303 5.7e-27 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 296 3.6e-26 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 294 6.4e-26 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 253 5.3e-25 2
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 282 1.7e-24 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 278 4.8e-24 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 277 6.3e-24 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 276 8.1e-24 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 273 1.8e-23 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 273 1.8e-23 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 271 3.1e-23 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 288 9.0e-23 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 288 9.1e-23 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 266 1.1e-22 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 266 1.1e-22 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 264 1.9e-22 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 264 1.9e-22 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 279 1.1e-21 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 260 1.1e-21 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 255 4.0e-21 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 258 4.6e-21 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 253 2.3e-20 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 254 2.6e-20 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 229 3.9e-20 2
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 265 4.0e-20 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 248 2.2e-19 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 241 2.9e-19 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 235 4.0e-18 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 242 5.9e-18 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 236 6.0e-18 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 238 6.5e-18 1
UNIPROTKB|C9J3T9 - symbol:UXS1 "UDP-glucuronic acid decar... 223 7.1e-18 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 232 1.8e-17 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 232 1.8e-17 1
UNIPROTKB|P77398 - symbol:arnA "fused UDP-L-Ara4N formylt... 224 3.5e-17 2
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 229 4.8e-17 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 230 5.5e-17 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 225 9.4e-17 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 223 1.1e-16 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 200 2.0e-16 2
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 200 2.0e-16 2
UNIPROTKB|Q4KC82 - symbol:arnA "Bifunctional polymyxin re... 210 2.2e-16 2
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 222 2.3e-16 1
TAIR|locus:2041974 - symbol:AXS1 "UDP-D-apiose/UDP-D-xylo... 141 2.4e-16 2
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 222 3.0e-16 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 220 3.2e-16 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 220 3.2e-16 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 151 6.8e-16 2
TAIR|locus:2200018 - symbol:AXS2 "UDP-D-apiose/UDP-D-xylo... 139 8.4e-16 2
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 210 1.0e-14 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 205 2.1e-14 1
TIGR_CMR|CBU_0689 - symbol:CBU_0689 "GDP-mannose 4,6-dehy... 207 2.7e-14 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 206 3.9e-14 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 179 5.7e-14 2
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 179 5.7e-14 2
UNIPROTKB|Q83AP4 - symbol:CBU_1837 "UDP-glucose 4-epimera... 201 1.4e-13 1
TIGR_CMR|CBU_1837 - symbol:CBU_1837 "NAD-dependent epimer... 201 1.4e-13 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 198 1.4e-13 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 197 3.5e-13 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 197 3.9e-13 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 197 3.9e-13 1
UNIPROTKB|P71790 - symbol:gmdA "GDP-D-mannose dehydratase... 194 8.3e-13 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 195 1.4e-12 1
TIGR_CMR|GSU_0626 - symbol:GSU_0626 "GDP-mannose 4,6-dehy... 172 2.7e-12 2
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 190 3.0e-12 1
UNIPROTKB|Q2KIT8 - symbol:TSTA3 "Tissue specific transpla... 188 3.2e-12 1
UNIPROTKB|Q13630 - symbol:TSTA3 "GDP-L-fucose synthase" s... 188 3.2e-12 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 189 3.9e-12 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 186 5.2e-12 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 187 5.2e-12 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 186 8.7e-12 1
WARNING: Descriptions of 136 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 1662 (590.1 bits), Expect = 5.6e-171, P = 5.6e-171
Identities = 321/446 (71%), Positives = 368/446 (82%)
Query: 5 ELIHRSQTSQTQDQIIGLDSSPRPSKSVKSFRNPVQYVLRSQRLIFLFIGIAISSLIFSK 64
ELI+R + DQ P+P K + P++Y+LR QRLIF+ +GIAI++L+F+
Sbjct: 4 ELINRRHET---DQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60
Query: 65 LPVRQHQIANPAPLT----TSETTHLSRRRVLYEAAEVQHVN----AGGKVPLGLQRKSL 116
P P + + +++ + + + ++++N GGK+PLGL+RK L
Sbjct: 61 FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPS-LEYLNRIGATGGKIPLGLKRKGL 119
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
R++VTGGAGFVGSHLVDRLM RGD+VIVVDN+FTG+K+N++HHF NP FE+IRHDVVEPI
Sbjct: 120 RVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVVEPI 179
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP
Sbjct: 180 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 239
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
LQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG +E RIARIFNTYGPRMCID
Sbjct: 240 LQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCID 299
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL+RLMEG+HVGPFNLGNPGEF
Sbjct: 300 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 359
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
TMLELA+VVQE ID NA IEFRPNTEDDPHKRKPDITKAK+LLGWEP+V+LR+GLPLMV
Sbjct: 360 TMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVK 419
Query: 417 DFRHRIFGDQKEAXXXXXXXDATSSS 442
DFR R+FGDQKE T+S+
Sbjct: 420 DFRQRVFGDQKEGSSAAATTTKTTSA 445
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 232/311 (74%), Positives = 263/311 (84%)
Query: 113 RKSLRILVTGGAGFVGSHLVDRLM-DRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHD 171
+ ++RILVTGGAGF+GSHLVD+LM + + VIV DNYFTG KDNL G+PRFELIRHD
Sbjct: 28 QSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 87
Query: 172 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 231
V EP+ +EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 88 VTEPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 147
Query: 232 VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGP 291
VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL DYHR GIE RIARIFNTYGP
Sbjct: 148 VYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 207
Query: 292 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLG 351
RM IDDGRVVSNF+AQALR E LTV G QTRSF +VSD+VEGL+RLMEGD GP N+G
Sbjct: 208 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIG 267
Query: 352 NPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 411
NPGEFTM+ELAE V+E+I + I+ NT DDP +RKPDI+KAK++LGWEP+V LR+GL
Sbjct: 268 NPGEFTMVELAETVKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGL 327
Query: 412 PLMVADFRHRI 422
PLM DFR R+
Sbjct: 328 PLMEEDFRLRL 338
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 231/311 (74%), Positives = 265/311 (85%)
Query: 113 RKSLRILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNYFTGKKDNLIHHFGNPRFELIRHD 171
+ ++RIL++GGAGF+GSHLVD+LM+ + VIV DNYFTG KDNL G+PRFELIRHD
Sbjct: 26 QSNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 85
Query: 172 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 231
V EP+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 86 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 145
Query: 232 VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGP 291
VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL DYHR GIE RIARIFNTYGP
Sbjct: 146 VYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 205
Query: 292 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLG 351
RM IDDGRVVSNF+AQALR E LTV G QTRSF +VSD+V+GL+RLMEGD GP N+G
Sbjct: 206 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIG 265
Query: 352 NPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 411
NPGEFTM+ELAE V+E+I+ + I+ NT DDP +RKPDITKAK++LGWEP+V LR+GL
Sbjct: 266 NPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGL 325
Query: 412 PLMVADFRHRI 422
PLM DFR R+
Sbjct: 326 PLMEEDFRLRL 336
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 227/309 (73%), Positives = 264/309 (85%)
Query: 115 SLRILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV 173
++RIL++GGAGF+GSHLVD+LM+ + V+V DNYFTG K+NL G+PRFELIRHDV
Sbjct: 44 NMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVT 103
Query: 174 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 233
EP+L+EVD+IYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSEVY
Sbjct: 104 EPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 163
Query: 234 GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRM 293
GDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL DYHR GIE RIARIFNTYGPRM
Sbjct: 164 GDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM 223
Query: 294 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNP 353
IDDGRVVSNF+AQALR E LTV G QTRSF +VSD+V+GLIRLMEG+ GP N+GNP
Sbjct: 224 NIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEGNDTGPINIGNP 283
Query: 354 GEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPL 413
GEFTM+ELAE V+E+I+ + I+ NT DDP +RKPDI+KAK++LGWEP+V LR+GLPL
Sbjct: 284 GEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPL 343
Query: 414 MVADFRHRI 422
M DFR R+
Sbjct: 344 MEEDFRLRL 352
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 197/304 (64%), Positives = 240/304 (78%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEP 175
+RILVTGGAGF+GSHL +RL+++G V+ +DN+FTG K N+ RFE+IRHD++EP
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEP 60
Query: 176 ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 235
ILLEVD+IY+LACPASPVHY++NPVKTIKT+V+GT+NMLGLAKRV AR L STSEVYGD
Sbjct: 61 ILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGD 120
Query: 236 PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCI 295
P HPQ E+YWGNVNPIG+RSCYDEGKR AETL MDYHR G++ RIARIFNTYGPRM
Sbjct: 121 PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAE 180
Query: 296 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV-GPFNLGNPG 354
DGRVVSNFV QALR E LTVYGDG QTRSF +V DL++GL+ LME D GP NLGNP
Sbjct: 181 HDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNPE 240
Query: 355 EFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLM 414
E ++E A + + +++I +RP DDP +R+PDIT A+ +LGWEPRV+L +GL
Sbjct: 241 ETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAKT 300
Query: 415 VADF 418
+ F
Sbjct: 301 IEYF 304
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 194/306 (63%), Positives = 235/306 (76%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RILVTGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 90 RILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 210 EVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +LGWEP V L +GL +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 417 DFRHRI 422
FR +
Sbjct: 390 YFRKEL 395
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 193/306 (63%), Positives = 236/306 (77%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 92
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 93 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 152
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 153 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 212
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 213 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 272
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +LGWEP V L +GL +
Sbjct: 273 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 332
Query: 417 DFRHRI 422
FR +
Sbjct: 333 YFRKEL 338
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 193/306 (63%), Positives = 236/306 (77%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +LGWEP V L +GL +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 417 DFRHRI 422
FR +
Sbjct: 390 YFRKEL 395
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 193/306 (63%), Positives = 236/306 (77%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +LGWEP V L +GL +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 417 DFRHRI 422
FR +
Sbjct: 390 YFRKEL 395
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 193/306 (63%), Positives = 236/306 (77%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +LGWEP V L +GL +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 417 DFRHRI 422
FR +
Sbjct: 390 YFRKEL 395
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 193/306 (63%), Positives = 236/306 (77%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +LGWEP V L +GL +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 417 DFRHRI 422
FR +
Sbjct: 390 YFRKEL 395
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 194/306 (63%), Positives = 236/306 (77%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 91 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 150
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 151 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 210
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 211 EVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 270
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 271 DGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 330
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A+++++++ + I+F +DDP KRKPDI KAK LLGWEP V L +GL +
Sbjct: 331 TILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRKAKLLLGWEPVVPLEEGLNKAIH 390
Query: 417 DFRHRI 422
FR +
Sbjct: 391 YFRKEL 396
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 192/306 (62%), Positives = 235/306 (76%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 67 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 126
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 127 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 186
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ E YWG+VNP+G R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 187 EVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 246
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 247 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 306
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +LGWEP V L +GL +
Sbjct: 307 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 366
Query: 417 DFRHRI 422
FR +
Sbjct: 367 YFRKEL 372
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 192/306 (62%), Positives = 235/306 (76%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 84 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 143
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 144 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 203
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++
Sbjct: 204 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 263
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 264 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 323
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F +DDP KRKPDI KAK +L WEP V L +GL +
Sbjct: 324 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIRKAKMMLAWEPVVPLEEGLNKAIH 383
Query: 417 DFRHRI 422
FR +
Sbjct: 384 YFRKEL 389
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 189/306 (61%), Positives = 241/306 (78%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHLVD LM +G VIVVDN+FTG+K N+ H G+ FELI HD+V P+
Sbjct: 117 RILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHDIVNPL 176
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+E+D+IYHLA PASP HY +NPVKTIKTN +GT+N+LGLAKRV A+ L+ STSEVYGDP
Sbjct: 177 FIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDP 236
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ ETYWG+VNPIG R+CYDEGKR +ETL+ Y + ++ R+ARIFNTYGPRM ++
Sbjct: 237 TVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMN 296
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QALR E +TVYG+GKQTRSFQ+VSDLV+G+I LM ++ P NLGNP E
Sbjct: 297 DGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNLGNPVEQ 356
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+ E AE++++++ + I+ EDDP +RKPDIT+A+QLL WEP+V L GL ++
Sbjct: 357 TIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQRTIS 416
Query: 417 DFRHRI 422
FR+ +
Sbjct: 417 YFRNEL 422
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 190/306 (62%), Positives = 233/306 (76%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 88 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 147
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 148 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 207
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + G+E R+ARIFNT+G RM ++
Sbjct: 208 EVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMN 267
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ E LTVYG G QTR+FQ+VSDLV GL+ LM + P NLGNP E
Sbjct: 268 DGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEH 327
Query: 357 TMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
T+LE A++++ ++ + I+F P +DDP +R+PDI KAK LLGWEP V L +GL +
Sbjct: 328 TILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQ 387
Query: 417 DFRHRI 422
F +
Sbjct: 388 YFSREL 393
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 180/307 (58%), Positives = 235/307 (76%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHLVD+LM G VI +DNYFTG+K N+ H G+P FE++ HDVV P
Sbjct: 138 RILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNVEHWIGHPNFEMVHHDVVNPY 197
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP HY +NPVKTIKTN +GT+NMLGLAKRV A LL STSEVYGDP
Sbjct: 198 FVEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVKATVLLASTSEVYGDP 257
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
HPQ ETYWG+VN IG R+CYDEGKR AE+L + Y++ I+ RIARIFNT+GPRM ++
Sbjct: 258 EVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGPRMHMN 317
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEF 356
DGRVVSNF+ QAL+ +P+T+YG+G QTRSFQ+V+DLV+GLI+LM ++ P N+GNP E
Sbjct: 318 DGRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYSLPVNIGNPEEH 377
Query: 357 TMLELAEVVQEIIDRN-ARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV 415
T+ + A ++++++ + + I + +DDP +R+PDI +A + + W P+V ++ GL V
Sbjct: 378 TIGQFATIIRDLVPGSTSEIVNLESQQDDPQQRRPDIRRAAEQISWAPQVHMKDGLLKTV 437
Query: 416 ADFRHRI 422
FR I
Sbjct: 438 DYFRAEI 444
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 111/156 (71%), Positives = 128/156 (82%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
RIL+TGGAGFVGSHL D+LM G V VVDN+FTG+K N+ H G+ FELI HDVVEP+
Sbjct: 33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 92
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 236
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 93 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 152
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDY 272
HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y
Sbjct: 153 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 95/133 (71%), Positives = 113/133 (84%)
Query: 197 FNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRS 256
+NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP HPQ+E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 257 CYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV 316
CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
Query: 317 YGDGKQTRSFQFV 329
YG G QTR+FQ+V
Sbjct: 122 YGSGSQTRAFQYV 134
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 92/135 (68%), Positives = 108/135 (80%)
Query: 216 LAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 275
LAKRVGAR LL STSEVYGDP HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y +
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 276 LGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 335
G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 336 LIRLMEGDHVGPFNL 350
L+ LM + P NL
Sbjct: 153 LVALMNSNVSSPVNL 167
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 92/135 (68%), Positives = 108/135 (80%)
Query: 216 LAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 275
LAKRVGAR LL STSEVYGDP HPQ+E YWG+VNPIG R+CYDEGKR AET+ Y +
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 276 LGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 335
G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 336 LIRLMEGDHVGPFNL 350
L+ LM + P NL
Sbjct: 153 LVALMNSNVSSPVNL 167
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 86/120 (71%), Positives = 102/120 (85%)
Query: 197 FNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRS 256
+NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP HPQ+E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 257 CYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV 316
CYDEGKR AET+ Y + G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 112/320 (35%), Positives = 171/320 (53%)
Query: 115 SLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK---DNLIHHFGNPRFELIRHD 171
S + L+TGGAGF+GSHL + L+ RG +V +VDN++ GK D L+ ++ +
Sbjct: 2 SKKCLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIPISVLDKN 61
Query: 172 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 231
+ ++ + D ++HLA ++ I+TN GT N+L A + + + STSE
Sbjct: 62 SIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFASTSE 121
Query: 232 VYGD--PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTY 289
VYG P + + +G + I R Y K ETL + Y G+ I R FN Y
Sbjct: 122 VYGKAKPPFSEEGDRLYGATSKI--RWSYAICKTLEETLCLGYALE-GLPVTIVRYFNIY 178
Query: 290 GPRMCIDDGR---VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG 346
GPR DG V+ F++ AL+ E + VYGDG+QTR F +VSD VE IR M+ G
Sbjct: 179 GPRA--KDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMDEKVNG 236
Query: 347 PF-NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPH------KRKPDITKAKQLL 399
N+G+ E ++ E+AEV++++ D +++I P E PH R+PD+TK K L+
Sbjct: 237 EIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLV 296
Query: 400 GWEPRVTLRKGLPLMVADFR 419
++ +VT GL + FR
Sbjct: 297 QFQAKVTWEDGLKETIKWFR 316
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 103/314 (32%), Positives = 151/314 (48%)
Query: 113 RKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDV 172
RK + I VTGGAGF+GSH+VD L+D G V V+DN G + NL H NP D+
Sbjct: 2 RKPIAI-VTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDLTFEIKDI 60
Query: 173 VE-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL- 226
E P+ VD ++H A V NP+ ++TNV+GT+ +L A+ + L+
Sbjct: 61 CELSAPHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVY 120
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
++S YG P E + PI + Y K E + + G+ RIF
Sbjct: 121 AASSSCYG-LADVPTREDH-----PIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIF 174
Query: 287 NTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH 344
N YG R+ G V F Q L +P TV GDG Q R F +V+D+ ++ E
Sbjct: 175 NAYGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRK 234
Query: 345 VGP-FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEP 403
VG +NLG ++ L E++ +E+ P +P DI+K K+ LGWEP
Sbjct: 235 VGETWNLGAGNPQSINRLVELI------GGEVEYIPKRPGEPDCTWADISKIKRDLGWEP 288
Query: 404 RVTLRKGLPLMVAD 417
+T G+ M+++
Sbjct: 289 TITFADGVSRMMSE 302
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 101/316 (31%), Positives = 150/316 (47%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEP 175
+R LVTG AGF+GS LVDRL+ G SV+ +DN+ TG+ NL H N + D+V
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTA 60
Query: 176 IL---LEVDQ---IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 229
L LE + ++HLA +P NV+GT+ + A++ G R ++ ++
Sbjct: 61 DLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTS 120
Query: 230 S--EVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFN 287
S +YG P ++P ET P S Y GK E + G++ N
Sbjct: 121 SGGSIYGTPPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPAN 175
Query: 288 TYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG 346
YGPR + VV+ F L +P V+GDG TR + FV D+V+ +R+ G
Sbjct: 176 VYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGGG 235
Query: 347 -PFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRV 405
FN+G E + +L V + EF P D + DI A+++LGW P++
Sbjct: 236 LRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQI 295
Query: 406 TLRKGLPLMVADFRHR 421
L G+ V FRH+
Sbjct: 296 ELADGVRRTVEYFRHK 311
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 96/311 (30%), Positives = 150/311 (48%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDS-VIVVDNYFTGKKDNLIHHFGNPRFELI------- 168
+ +V GGAG +GSH VDRL+ + VI+ DN+ G ++NL +PR ++
Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67
Query: 169 RHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 227
+ D++ L VD ++H A Y++ P +TN+ GT N+L G R + +
Sbjct: 68 QTDILNTALKGVDGVFHFAALWLLQCYEY-PRSAFQTNIQGTFNVLETCVAQGVKRLVFS 126
Query: 228 STSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFN 287
S++ VYGD L+ P E + P R+ Y K E + YH G+ R N
Sbjct: 127 SSASVYGDALEEPMTEAH-----PFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLRYMN 181
Query: 288 TYGPRMCIDDGRV-VSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV 345
YGPR + V + AL K +P+T+YGDG Q F +V D I M+ D V
Sbjct: 182 VYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMKADTV 241
Query: 346 GPF-NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPR 404
+ N+G ++LELA+ +Q+I + I+F P R KA + +G++
Sbjct: 242 DEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTTFVKNRIGCPKKAAEQIGFKAE 301
Query: 405 VTLRKGLPLMV 415
V L +GL ++
Sbjct: 302 VGLTEGLQRLI 312
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 102/322 (31%), Positives = 150/322 (46%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRF----ELIRHDV- 172
ILVTG GF+GSHL + L+ +G V + Y N H F E++ D+
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQY---NSFNFWGHLEKSPFLKDMEVVSGDLR 60
Query: 173 ----VEPILLEVDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLL 226
E I +D I+HL A A P Y P + TNV GTLNML AK+ + F+
Sbjct: 61 DSFFCEKITKNIDAIFHLGALIAIPYSYTA-PQSYVDTNVNGTLNMLEAAKKNEISHFIH 119
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
TSTSEVYG P E + P+ +S Y K A+ + + Y+ + IAR F
Sbjct: 120 TSTSEVYGTAFYVPIDEKH-----PLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPF 174
Query: 287 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG 346
NTYGPR ++ + Q L GD R FV D EG I L+ H G
Sbjct: 175 NTYGPRQSAR--AIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFG 232
Query: 347 P-FNLGNPGEFTMLELAEVVQEIIDRNARI-----EFRPNTEDDPHKRKPDITKAKQLLG 400
+N+G+ E++M E+ ++Q+I+D +I RP + + D K K+
Sbjct: 233 EVYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSE-VFRLCCDANKLKKATN 291
Query: 401 WEPRVTLRKGLPLMVADFRHRI 422
W+ +++L +GL + F+ +
Sbjct: 292 WQSKISLEEGLRQSIEYFKENL 313
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 106/323 (32%), Positives = 156/323 (48%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGD--------SVIVVDNY-FTGKKDNLIHHFGNPRFE 166
++ILVTGGAGF+GSH V L+ GD V VVD + G NL +PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFS 59
Query: 167 LIRHDVVEPILLEVDQIYH--LACPASPVHYKFNPVKT---IKTNVVGTLNMLGLAKR-- 219
+R D+ + L+E H +A A+ H + V + + +N+VGT +L A R
Sbjct: 60 FVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHH 119
Query: 220 VGARFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGI 278
+G RFL ST EVYG +T W +P+ S Y K ++ L + YH+ G+
Sbjct: 120 IG-RFLHVSTDEVYGS------IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGM 172
Query: 279 EARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIR 338
+ + R N YGPR + +++ FV + L + VYGDG+ R + VSD GL
Sbjct: 173 DVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLAL 230
Query: 339 LMEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTEDDPHKRKPDITKAK 396
+ G +++G E T LEL E++ E A RI F + + + D +K
Sbjct: 231 ALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIA 290
Query: 397 QLLGWEPRVTLRKGLPLMVADFR 419
LG+ PRV G+ VA +R
Sbjct: 291 GELGYRPRVDFTDGIAETVAWYR 313
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 94/317 (29%), Positives = 149/317 (47%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRG---DSVIVVDNYFT--GKKDNLIHHFGNPRFELIRHDV 172
+LVTG AGF+GS V L+ G D V+ + T G DNL G+PR+ R D+
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 173 VE-P---ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 227
+ P ++ DQ+ HLA + + ++TNV GT +L A R G A F+
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 228 STSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFN 287
ST EVYG L+H W P+ S Y K + + L + +H G++ R+ R N
Sbjct: 125 STDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 288 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP 347
YGPR + +++ F+ + + +YGDG R + V D V G+ + G
Sbjct: 180 NYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGR 237
Query: 348 -FNLGNPGEFTMLELAEVVQEIIDRN-ARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRV 405
+N+G + EL ++ E + +E+ + + + D T+ ++ LG+ P V
Sbjct: 238 VYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAV 297
Query: 406 TLRKGLPLMVADF-RHR 421
L GL VA + +HR
Sbjct: 298 DLADGLAATVAWYHKHR 314
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 92/308 (29%), Positives = 144/308 (46%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV 173
++L+I +TG GF+ SH+ RL G VI D K +++ F L+ V+
Sbjct: 26 ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 82
Query: 174 EPIL--LE-VDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 228
E L E VD +++LA + + + N + N + + NM+ A+ G RF S
Sbjct: 83 ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 142
Query: 229 TSEVYGD--PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
++ +Y + L+ + P + Y K E L Y++ GIE RI R
Sbjct: 143 SACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFH 202
Query: 287 NTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGD 343
N YGP GR + F +A + ++GDG QTRSF F+ + VEG++RL + D
Sbjct: 203 NIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 262
Query: 344 HVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEP 403
P N+G+ +M E+AE+V ++ I P E R D K+ LGW P
Sbjct: 263 FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEG-VRGRNSDNNLIKEKLGWAP 321
Query: 404 RVTLRKGL 411
+ L++GL
Sbjct: 322 NMRLKEGL 329
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 296 (109.3 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 99/327 (30%), Positives = 149/327 (45%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVVEPIL 177
LVTGGAGF+G + V + RG V+ +D + G + L GN ++ D+ + L
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL 64
Query: 178 L-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK----------RV 220
+ + D + + A + P I+TNVVGTL +L + R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 221 GARFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIE 279
RFL ST EVYG ET + P S Y K ++ L +H G+
Sbjct: 125 AFRFLHVSTDEVYGT-----LGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 280 ARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRL 339
N YGP + +++ +A+AL EPL VYGDGKQ R + FVSD E + +
Sbjct: 180 VLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTV 237
Query: 340 MEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTE------DDP-HKRKP 390
+ VG +N+G E +E+ + + ++D++ R + +P D P H R+
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRY 297
Query: 391 --DITKAKQLLGWEPRVTLRKGLPLMV 415
D +K K LGWEP T +G+ L V
Sbjct: 298 AIDASKLKDELGWEPAYTFEQGIALTV 324
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 294 (108.6 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 90/312 (28%), Positives = 149/312 (47%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDS--VIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVVE 174
+LVTGGAGF+GSHL+ L R +I VDN + NL + + I DV +
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68
Query: 175 PILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 226
P+ ++ +D ++H A + P + ++ NV GT ++ + RF+
Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIY 128
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
ST EVYGD + P E ++P + Y K AE++ Y A I R
Sbjct: 129 ISTDEVYGDSVDQPFDE-----LSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSS 183
Query: 287 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG 346
N YGPR + +V+ F++ +++ T+ G G Q+R F +VSD+ + + +ME +G
Sbjct: 184 NVYGPRQHHE--KVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGILG 241
Query: 347 P-FNLGNPGEFTMLELA-EVVQ---EIIDRNARIEFRPNTEDDP--HKRKPDITKAKQLL 399
+N+G E +++LA E+VQ + + + ++ ED P R P + L
Sbjct: 242 EIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNSVKLHRL 301
Query: 400 GWEPRVTLRKGL 411
GW P+V +G+
Sbjct: 302 GWRPKVAWTEGI 313
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 253 (94.1 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 81/239 (33%), Positives = 116/239 (48%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDN---YFTG--KKDNLIHHFGNPRFELIRHDV 172
ILVTG AGF+G HL RL+DRGD V+ +DN Y+ K D L G F +R +
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTSL 63
Query: 173 VE-PILLEV------DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGARF 224
+ P L ++ D + +LA A V Y NP + +N+VG +N+L + G +
Sbjct: 64 ADRPALEDLFAGQRFDVVVNLAAQAG-VRYSITNPHAYVDSNLVGFINILEGCRHHGVKH 122
Query: 225 LL-TSTSEVYGDPLQHPQAETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
L+ S+S VYG P + + NV+ P+ S Y K+ E + Y G+
Sbjct: 123 LVYASSSSVYGANTAMPFSIHH--NVDHPV---SLYAATKKANELMAHTYSSLYGLPTTG 177
Query: 283 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
R F YGP D + F L P+ VY GK R F +V D+VEG+ R+M+
Sbjct: 178 LRFFTVYGPWGRPDMALFL--FTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMD 234
Score = 55 (24.4 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 14/72 (19%), Positives = 30/72 (41%)
Query: 348 FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
+N+GN +L E +++ + A+ P D D+ +G++P +
Sbjct: 260 YNIGNNNPVELLAFIEAIEQNLGITAQKNLLPLQAGDVPATYADVDDLMNDVGFKPATPI 319
Query: 408 RKGLPLMVADFR 419
+G+ V +R
Sbjct: 320 GEGIERFVEWYR 331
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 282 (104.3 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 96/323 (29%), Positives = 146/323 (45%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVVEPIL 177
LVTG AGF+G + V + RG V+ +D + G + L GN ++ D+ + L
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL 64
Query: 178 L-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK----------RV 220
+ + D + + A + P I+TNVVGTL +L + R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 221 GARFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIE 279
RFL ST EVYG ET + P S Y K ++ L +H G+
Sbjct: 125 AFRFLHVSTDEVYGT-----LGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 280 ARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRL 339
N YGP + +++ +A+AL EPL VYGDGKQ R + FVSD E + +
Sbjct: 180 VLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTV 237
Query: 340 MEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTE------DDP-HKRKP 390
+ VG +N+G E +E+ + + ++D++ R + +P D P H R+
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRY 297
Query: 391 --DITKAKQLLGWEPRVTLRKGL 411
D +K K LGWEP T +G+
Sbjct: 298 AIDASKLKDELGWEPAYTFEQGI 320
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 278 (102.9 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 98/326 (30%), Positives = 149/326 (45%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVVEP 175
ILVTGGAGF+GS +V ++ DSV+ +D + G ++L NPR+ + D+ +
Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68
Query: 176 ILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----------K 218
L+ D + HLA + + + I+TN+VGT ++L A K
Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEK 128
Query: 219 RVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGI 278
R RF ST EVYGD H + + P S Y K A+ L + R +
Sbjct: 129 REAFRFHHISTDEVYGD--LHGTDDLFT-ETTPYAPSSPYSASKAAADHLVRAWQRTYRL 185
Query: 279 EARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIR 338
+ ++ N YGPR + +++ + AL +PL VYGDG Q R + FV D L +
Sbjct: 186 PSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQ 243
Query: 339 LMEGDHVGP-FNLGNPGEFTMLELAEVV----QEIIDRN----ARIE-FRPNTEDDP-HK 387
++ VG +N+G E T LE+ + + +E+ AR E +D P H
Sbjct: 244 VVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHD 303
Query: 388 RK--PDITKAKQLLGWEPRVTLRKGL 411
+ D K ++ LGW P T GL
Sbjct: 304 ARYAVDAAKIRRDLGWLPLETFESGL 329
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 277 (102.6 bits), Expect = 6.3e-24, P = 6.3e-24
Identities = 96/316 (30%), Positives = 157/316 (49%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGN-PRFELIRHDVVEPI 176
+LVTGG GF+GSHLVD L+ +G V V+DN G +NL G + E+I ++ +
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENL--KCGQRDKLEIINGNLTDKF 61
Query: 177 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 230
LL+ + ++HLA A+ + + ++ N + T N+L +R R + S++
Sbjct: 62 LLDSAVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLVFASSA 121
Query: 231 EVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYG 290
VYG+ E Y G + PI S Y K E L Y G++A + R N G
Sbjct: 122 AVYGESGLTVLDEDY-GPLLPI---SLYGASKLAGEGLISAYSHLYGLKATMFRFANIVG 177
Query: 291 PRMCIDDGRVVSNFVAQALRKEP--LTVYGDGKQTRSFQFVSDLVEGLIRLMEGD--HVG 346
R G V+ +FV++ LR+ P L V GDG Q++ + VSD V G++ E ++G
Sbjct: 178 SRR--HSG-VIYDFVSR-LRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNLG 233
Query: 347 PFNLGNPGEFTMLELAEVV-QEIIDRNARIEFRPNTE----DDPHKRKPDITKAKQLLGW 401
+NLG P + ++A +V E+ +N + D P R DI++ + L G+
Sbjct: 234 LYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRF-DISRIRTL-GF 291
Query: 402 EPRVTLRKGLPLMVAD 417
+P+ T + + L + +
Sbjct: 292 KPKFTSLQAVKLAIKE 307
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 276 (102.2 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 89/315 (28%), Positives = 149/315 (47%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEP 175
++ILVTGGAGF+GS V R +I+VD I + R + + DV +
Sbjct: 1 MKILVTGGAGFIGSAFV-RKYAYDHELIIVDKLTYAGDLRRIEEVRD-RIKFYKADVADK 58
Query: 176 ILLEVDQIYHLACPASPVHYKF---------NPVKTIKTNVVGTLNMLGLAKRVGA-RFL 225
+E +I+ P + VH+ +P I+TNV GT ML +++ G +F+
Sbjct: 59 TAIE--EIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFV 116
Query: 226 LTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
ST EVYG+ + Q + +P+ S Y K A+ L YHR G+ +AR
Sbjct: 117 HISTDEVYGELGKEGQ----FTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARP 172
Query: 286 FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV 345
N YGP + +++ + +AL EP+ VYG G R + +V D +E + L++
Sbjct: 173 CNNYGPWQYPE--KLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGKP 230
Query: 346 GP-FNLGNPGEFTMLELAEVVQEIIDR-NARIEFRPNTEDDP-HKRKPDIT--KAKQLLG 400
G +N+G+ E +E+ + + I+ + + I F ED P H + + K K
Sbjct: 231 GEAYNIGSGEEKGNIEVVKEILRILGKPESLITF---VEDRPGHDFRYSLNSKKIKMNYA 287
Query: 401 WEPRVTLRKGLPLMV 415
W+ +V +G+ ++
Sbjct: 288 WKHKVNFNEGIRFVI 302
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 273 (101.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 92/311 (29%), Positives = 141/311 (45%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIH----HFGNPRFELIRHDVV 173
IL+ GGAG++GSH V +L+D G SV+VVDN TG +D + + G+ R + DV
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVF 63
Query: 174 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 232
+E + H A + P++ NV G L +L + +F+ +ST+
Sbjct: 64 TQENIEA--VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAAT 121
Query: 233 YGD-PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYG- 290
YG+ + ET NP Y E K E + Y + + +I R FN G
Sbjct: 122 YGEVDVDLITEETM---TNPTNT---YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGA 175
Query: 291 -PRMCI-DDGRVVSNFVAQALR-----KEPLTVYGDGKQT------RSFQFVSDLVE--- 334
P I +D R ++ + L+ +E + ++GD T R + V DLV
Sbjct: 176 TPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF 235
Query: 335 -GLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDIT 393
GL L G +NLGN F++ E+ + V+E+ + E P DP +
Sbjct: 236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQ 295
Query: 394 KAKQLLGWEPR 404
KAK+ LGW+PR
Sbjct: 296 KAKEKLGWDPR 306
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 273 (101.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 92/331 (27%), Positives = 153/331 (46%)
Query: 117 RILVTGGAGFVGSHLVDRLM-DRGDSVIV-VDNY-FTGKKDNLIHHFGNPRFELIRHDVV 173
R+LVTGGAGF+ SH++ L+ D D +IV +D + NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 174 EP----ILLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RFL 225
+ +L EV++I + A+ H + V+ + NV GT ++ A G +F+
Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFI 138
Query: 226 LTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
ST EVYG L E+ +P + Y K AE Y I R
Sbjct: 139 YVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 286 FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV 345
N YGP + +V+ F++ ++G G Q R+F + +D+VE + ++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEP 251
Query: 346 GP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFRPNTE---DDPHK--RKPDITKAKQL 398
G +N+G E ++++LA E++Q I + N+ E + D PH R P ++
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHS 311
Query: 399 LGWEPRVTLRKGLPLMVADFRHRIFGDQKEA 429
LGW+P+V +G+ V +R F + K A
Sbjct: 312 LGWKPKVPWEEGIKKTVEWYRKN-FHNWKNA 341
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 271 (100.5 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 95/329 (28%), Positives = 154/329 (46%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHD-- 171
+ ILVTGG+GF+GS L+ +++ D VI +D + + L NPR+ + D
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 172 ---VVEPIL--LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK-------- 218
V+E I + D + HLA + ++TN+VGT +L +AK
Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 121
Query: 219 --RVGARFLLTSTSEVYGD-PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 275
+ RF ST EVYGD L P A T +P S Y K + L +HR
Sbjct: 122 AKKTTFRFHHISTDEVYGDLSLSEP-AFTEQSPYHP---SSPYSASKAASNHLVQAWHRT 177
Query: 276 LGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 335
G+ I N YG + +++ ++ A+ +PL +YGDG+Q R + FV D V+
Sbjct: 178 YGLPVIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQA 235
Query: 336 LIRLMEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNA-----RIEFRPN----TEDDP 385
++ VG +N+G E T LE+ + + ++++ A I++ + +D P
Sbjct: 236 SYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRP 295
Query: 386 -H--KRKPDITKAKQLLGWEPRVTLRKGL 411
H + D +K LGW+P++T +GL
Sbjct: 296 GHDVRYSLDCSKIHAELGWQPQITFEQGL 324
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 288 (106.4 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 91/315 (28%), Positives = 152/315 (48%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLM-DRGD-SVIVVD--NYFTGKKDNLIHHFGNPRFELIR 169
K IL+TG AGF+ SH+ +RL+ D ++V+D +Y + K NL +P F+ ++
Sbjct: 5 KPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLK-NLNPSKSSPNFKFVK 63
Query: 170 HDV-----VEPILL--EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG 221
D+ V +L+ E+D I H A V F N + K N+ GT +L K G
Sbjct: 64 GDIASADLVNYLLITEEIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
Query: 222 A--RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIE 279
RF+ ST EVYG+ + + + + + Y K AE L M Y R G+
Sbjct: 123 QIRRFIHVSTDEVYGETDEDASVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 280 ARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-IR 338
R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E +
Sbjct: 181 VITTRGNNVYGPNQFPE--KLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVV 238
Query: 339 LMEGDHVGPFNLGNPGEFTMLELAEVVQEI--IDRNARIEFRPNTEDDPHKRKPDITKAK 396
L +G+ +N+G E ++++A + ++ ID ++ I++ N + + D K K
Sbjct: 239 LHKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLK 298
Query: 397 QLLGWEPRVTLRKGL 411
+L GW R +GL
Sbjct: 299 KL-GWCERTNWEEGL 312
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 288 (106.4 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 90/315 (28%), Positives = 150/315 (47%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLM-DRGD-SVIVVD--NYFTGKKDNLIHHFGNPRFELIR 169
K IL+TG AGF+ SH+ +RL+ + D ++V+D +Y + K NL F +P F+ ++
Sbjct: 7 KPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLK-NLDPSFSSPNFKFVK 65
Query: 170 HDV-----VEPILL--EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG 221
D+ V +L+ +D I H A V F N + K N+ GT +L K G
Sbjct: 66 GDIASDDLVNYLLITENIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTG 124
Query: 222 A--RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIE 279
RF+ ST EVYG+ + + + + + Y K AE L M Y R G+
Sbjct: 125 QIRRFIHVSTDEVYGETDEDAAVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 182
Query: 280 ARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRL 339
R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E +
Sbjct: 183 VITTRGNNVYGPNQFPE--KMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVV 240
Query: 340 MEGDHVGP-FNLGNPGEFTMLELAEVVQEII--DRNARIEFRPNTEDDPHKRKPDITKAK 396
+ +G +N+G E ++++A + ++ D + I+F N + + D K K
Sbjct: 241 LHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLK 300
Query: 397 QLLGWEPRVTLRKGL 411
+L GW+ R GL
Sbjct: 301 KL-GWQERTNWEDGL 314
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 93/348 (26%), Positives = 161/348 (46%)
Query: 102 NAGGKVPLGLQRK-SLRILVTGGAGFVGSHLVDRLMDRGDSVIVVD----NYFTGKKDNL 156
+AG PLG + R+LVTGGAGF+ SH++ L++ + ++++ +Y K NL
Sbjct: 3 SAGRAEPLGPPSSFAKRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLK-NL 61
Query: 157 IHHFGNPRFELIRHDVVEP----ILLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVG 209
++ I+ D+ +L E ++I + A+ H + V+ + NV G
Sbjct: 62 ETISNKQNYKFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG 121
Query: 210 TLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETL 268
T ++ A +F+ ST EVYG L E+ +P + Y K AE
Sbjct: 122 THVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECF 176
Query: 269 TMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF 328
Y A I R N YGP + +V+ F++ ++G G QTR+F +
Sbjct: 177 VQSYWERYKFPAVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLY 234
Query: 329 VSDLVEGLIRLMEGDHVGP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFRPNTE---D 383
+D+VE + +++ G +N+G E ++L+LA E++Q I + ++ E + D
Sbjct: 235 ATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVND 294
Query: 384 DPHK--RKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRIFGDQKEA 429
P R P ++ Q LGW P+V ++G+ + +R F + K A
Sbjct: 295 RPTNDMRYPMKSEKIQGLGWRPKVPWKEGIKKTIDWYREN-FHNWKNA 341
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 84/312 (26%), Positives = 147/312 (47%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY----FTGKKDNLIHHFGNPRFELIRHD 171
+ ILVTGGAGF+GS+ V ++ ++ ++ N+ ++G +N+ +P + ++ +
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKII-NFDALTYSGNLNNVKSIQDHPNYYFVKGE 59
Query: 172 VVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-AR 223
+ LLE V I + A + NP+ TNV+GT+ +L L K+ +
Sbjct: 60 IQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIK 119
Query: 224 FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA 283
+ ST EVYG L T P+ S Y K +A+ + + Y++ + +
Sbjct: 120 LVQVSTDEVYGS-LGKTGRFT---EETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVT 175
Query: 284 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGD 343
R N YGP + +++ V AL + L +YGDG R + V+D + ++
Sbjct: 176 RCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKG 233
Query: 344 HVGP-FNLGNPGEFTMLELAEVVQEIIDRNAR-IEFRPNTEDDPHKRKPDIT--KAKQLL 399
VG +N+G E T +E+ E + ++ + + IE+ T+ H R+ I K K
Sbjct: 234 RVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYV--TDRLGHDRRYAINAEKMKNEF 291
Query: 400 GWEPRVTLRKGL 411
WEP+ T +GL
Sbjct: 292 DWEPKYTFEQGL 303
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 264 (98.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 95/327 (29%), Positives = 149/327 (45%)
Query: 117 RILVTGGAGFVGSHLVDRLM-DRGDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVVE 174
+ILVTGGAGF+GS +V ++ + DSV+ +D + G ++L NPR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62
Query: 175 PILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA---------- 217
L+ D + HLA + + + I+TN+VGT N+L A
Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSE 122
Query: 218 KRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG 277
K RF ST EVYGD L + + P S Y K +++ L + R G
Sbjct: 123 KHEAFRFHHISTDEVYGD-LSG--TDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 278 IEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLI 337
+ + N YGP + +++ + AL +PL VYGDG Q R + FV D L
Sbjct: 180 LPTIVTNCSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 338 RLMEGDHVGP-FNLGNPGEFTMLELAEVV----QEIIDRN----ARIE-FRPNTEDDP-H 386
+++ VG +N+G E +E+ + + +E+ AR E +D P H
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 387 KRK--PDITKAKQLLGWEPRVTLRKGL 411
+ D K ++ LGW+P T GL
Sbjct: 298 DARYAVDTAKIRRDLGWQPLETFESGL 324
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 264 (98.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 98/320 (30%), Positives = 149/320 (46%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRG-DS-VIVVDNYFT--GKKDNLIHHFGNPRFELIR 169
K +ILVTG GF+GSHL + L+ RG D+ V N F G D+L ++
Sbjct: 4 KGKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKS-LDVFA 62
Query: 170 HDVVEP-----ILLEVDQIYHLACP-ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A 222
D+ +P + D + HLA A P Y +P + TNV GTLN++ A+ +G A
Sbjct: 63 GDIRDPHGVREAMKGCDVVLHLAALIAIPYSYH-SPDTYVDTNVKGTLNVVQAARELGVA 121
Query: 223 RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
+ + TSTSEVYG P E + P+ +S Y K A+ + M ++ I
Sbjct: 122 KVVHTSTSEVYGTARFVPITEEH-----PLQGQSPYSASKIGADQIAMSFYSSFDTPVAI 176
Query: 283 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEG 342
R FNTYGPR + + Q G TR +V+D V G I + E
Sbjct: 177 IRPFNTYGPRQSAR--AFIPTVITQIASGARTLRLGALHPTRDLNYVADTVAGFIAVAES 234
Query: 343 DH-VGP-FNLGNPGEFTMLELAEVVQEIIDRNARI-----EFRPNTEDDPHKRKPDITKA 395
+ VG N+G+ E +M E A ++ +++ + I RP+ + + + D +KA
Sbjct: 235 EKSVGEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPD-KSEVERLWADTSKA 293
Query: 396 KQLL----GWEPRVTLRKGL 411
K+LL + + LR+GL
Sbjct: 294 KRLLDHGQNYGGKDGLRRGL 313
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 279 (103.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 91/310 (29%), Positives = 149/310 (48%)
Query: 118 ILVTGGAGFVGSHLVDRLM-DRGD-SVIVVD--NYFTGKKD-NLIHHFGNPRF---ELIR 169
IL+TG AGF+ SH+ +RL+ D ++V+D +Y + K+ N H N +F ++
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 170 HDVVEPILLE--VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 224
D+V +L+ +D I H A V F N + K N+ GT +L K G RF
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ ST EVYG+ + + + + + Y K AE L M Y R G+ R
Sbjct: 128 IHVSTDEVYGETDEDALVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH 344
N YGP + +++ F+ A+R + L ++GDG RS+ + D+ E ++
Sbjct: 186 GNNVYGPNQFPE--KLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243
Query: 345 VGP-FNLGNPGEFTMLELAEVVQEI--IDRNARIEFRPNTEDDPHKRKPDITKAKQLLGW 401
VG +N+G E + ++A+ + ++ +D A I+F N + + D K K+L GW
Sbjct: 244 VGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL-GW 302
Query: 402 EPRVTLRKGL 411
R T +GL
Sbjct: 303 SERTTWEEGL 312
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 260 (96.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 86/332 (25%), Positives = 154/332 (46%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVD----NYFTGKKDNLIHHFGNPRFELIRHDV 172
R+LVTGGAGF+ SH++ L++ + ++++ +Y K NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLK-NLETISNKQNYKFIQGDI 77
Query: 173 VEP----ILLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RF 224
+ +L E ++I + A+ H + V+ + NV GT ++ A +F
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKF 137
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ ST EVYG L E+ +P + Y K AE Y I R
Sbjct: 138 IYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH 344
N YGP + +V+ F++ ++G G QTR+F + +D+VE + +++
Sbjct: 193 SSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGK 250
Query: 345 VGP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFR---PNTEDDPHKRKPDITKAKQL- 398
G +N+G E ++L+LA E++Q I + N+ E +D P K++++
Sbjct: 251 PGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIH 310
Query: 399 -LGWEPRVTLRKGLPLMVADFRHRIFGDQKEA 429
LGW P+V ++G+ + +R F + K A
Sbjct: 311 GLGWRPKVPWKEGIKKTIEWYREN-FHNWKNA 341
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 255 (94.8 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 93/318 (29%), Positives = 149/318 (46%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSV--IVVDNY-FTGKKDNLIHHFGNPRFELIRHDV-- 172
I+VTGGAGF+GS+ V + + V V+D + G + NL G+ R EL+ D+
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGD-RVELVVGDIAD 65
Query: 173 ---VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 229
V+ + + D I H A + + +P I TN VGT +L A++ RF ST
Sbjct: 66 SELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHHVST 125
Query: 230 SEVYGD-PLQ-----HPQA--ETYWGNV--NPIGVRSCYDEGKRTAETLTMDYHRGLGIE 279
EVYGD PL+ H + E + NP S Y K ++ + + R G++
Sbjct: 126 DEVYGDLPLREDLPGHGEGPGEKFTAETKYNP---SSPYSSTKAASDLIVKAWVRSFGVK 182
Query: 280 ARIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLI 337
A I+ N YGP I+ R ++N ++ K +YG+GK R + +D G+
Sbjct: 183 ATISNCSNNYGPYQHIEKFIPRQITNILSGIKPK----LYGEGKNVRDWIHTNDHSTGVW 238
Query: 338 RLMEGDHVGP-FNLGNPGEFTMLELAEVVQEIID--RNARIEFRPNTEDDPHKRKPDITK 394
++ +G + +G GE E+ E++ E + +NA D + D TK
Sbjct: 239 AILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDL-RYAIDSTK 297
Query: 395 AKQLLGWEPRVT-LRKGL 411
++ LGW+P+ T +GL
Sbjct: 298 LREELGWKPQFTNFEEGL 315
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 258 (95.9 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 92/343 (26%), Positives = 160/343 (46%)
Query: 108 PLGLQRK-SLRILVTGGAGFVGSHLVDRLMDRGDSVIVVD----NYFTGKKDNLIHHFGN 162
PLG + R+LVTGGAGF+ SH++ L++ + ++V+ +Y K NL
Sbjct: 9 PLGPPNSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLK-NLETISDK 67
Query: 163 PRFELIRHDVVEP----ILLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLG 215
++ I+ D+ + +L E ++I + A+ H + V+ + NV GT +L
Sbjct: 68 QNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLS 127
Query: 216 LAKRVGA-RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 274
A +F+ ST EVYG L E+ +P + Y K AE Y
Sbjct: 128 AAHEARVEKFIYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWE 182
Query: 275 GLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE 334
I R N YGP + +V+ F++ ++G G QTR+F + +D+VE
Sbjct: 183 RYKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVE 240
Query: 335 GLIRLMEGDHVGP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFRPNTEDDPHKRKP-D 391
+ +++ G +N+G E ++L+LA E++Q I + + E N D + R D
Sbjct: 241 AFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEME-NWVDYVNDRPTND 299
Query: 392 IT---KAKQL--LGWEPRVTLRKGLPLMVADFRHRIFGDQKEA 429
+ K++++ LGW P+V ++G+ + +R F + K A
Sbjct: 300 MRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYREN-FHNWKNA 341
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 253 (94.1 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 84/323 (26%), Positives = 153/323 (47%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVD----NYFTGKKDNLIHHFGNPRFELIRHDV 172
R+LVTGGAGF+ SH++ L++ + ++++ +Y K NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLK-NLETISNKQNYKFIQGDI 77
Query: 173 VEP----ILLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RF 224
+ +L E ++I + A+ H + V+ + NV GT ++ A +F
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKF 137
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ ST EVYG L E+ +P + Y K AE Y I R
Sbjct: 138 IYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH 344
N YGP + +V+ F++ ++G G QTR+F + +D+VE + +++
Sbjct: 193 SSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGK 250
Query: 345 VGP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFRPNTEDDPHKRKP-DIT---KAKQL 398
G +N+G E ++++LA E++Q I + N+ E N D + R D+ K++++
Sbjct: 251 PGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEME-NWVDYVNDRPTNDMRYPMKSEKI 309
Query: 399 --LGWEPRVTLRKGLPLMVADFR 419
LGW P+V ++G+ + +R
Sbjct: 310 HGLGWRPKVPWKEGIKKTIEWYR 332
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 254 (94.5 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 93/327 (28%), Positives = 147/327 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLM-DRGDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVVE 174
+ILVTGGAGF+GS +V ++ + D+V+ VD + G ++L NPR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62
Query: 175 PILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV------- 220
L+ D + HLA + + + I+TN+VGT N+L A+
Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122
Query: 221 ---GARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG 277
RF ST EVYGD + + P S Y K +++ L + R G
Sbjct: 123 QHEAFRFHHISTDEVYGDL---GGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 278 IEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLI 337
+ + N YGP + +++ + AL +PL VYGDG Q R + FV D L
Sbjct: 180 LPTIVTNCSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 338 RLMEGDHVGP-FNLGNPGEFTMLELAEVV----QEIIDRN----ARIE-FRPNTEDDP-H 386
+++ VG +N+G E +E+ + + +E+ AR E +D P H
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 387 --KRKPDITKAKQLLGWEPRVTLRKGL 411
+ D K ++ LGW P T GL
Sbjct: 298 DVRYAVDAAKIRRDLGWLPLETFESGL 324
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 229 (85.7 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 73/244 (29%), Positives = 116/244 (47%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN---YFTG--KKDNLIH-----HFGNPRF 165
+R LVTG AGF+G HL RL+ RGD ++ +DN Y+ K+ L HF +
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKL 65
Query: 166 ELIRHDVVEPILLE--VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 222
+L + + + D + HLA A V Y NP + +N+VG ++L +
Sbjct: 66 DLADRQGMTDLFQKHLFDTVVHLAAQAG-VRYSLTNPYAYVDSNLVGFAHILEGCRHQSV 124
Query: 223 RFLL-TSTSEVYGDPLQHPQAETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
+ L+ S+S VYG ++P +E+ NV+ PI + Y K+ E + Y +
Sbjct: 125 KHLVFASSSSVYGANEKYPFSES--DNVDHPIAL---YAASKKANELMAHSYAHLFQLPC 179
Query: 281 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
R F YGP D + F L +P+ VY GK +R F ++ D+V+G++ +
Sbjct: 180 TGLRFFTVYGPWGRPD--MALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTL 237
Query: 341 EGDH 344
DH
Sbjct: 238 --DH 239
Score = 62 (26.9 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 12/64 (18%), Positives = 32/64 (50%)
Query: 348 FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
+N+G+ + ++++ +++ A F P D + D+++ ++ + PR L
Sbjct: 264 YNIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPL 323
Query: 408 RKGL 411
+KG+
Sbjct: 324 QKGV 327
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 265 (98.3 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 92/322 (28%), Positives = 143/322 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSV--IVVDNYFTGKK-DNLIHHFGN-PRFELIRHDVV 173
+++TGG GF+GS+ V+ + D + + +D N+ N PR++L+ D+
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 174 -EPILL------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RF 224
E +L E+D + H A + + ++ NV+ + L + G RF
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRF 127
Query: 225 LLTSTSEVYGDP--LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
+ ST EVYGD ++ Q + + + P G + Y K E Y +
Sbjct: 128 VHISTDEVYGDSDLSENEQGKVEFSRLVP-G--NPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 283 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME- 341
AR+ N YGP D +VV F+ A + T+ G GKQ RS+ FV D GL + E
Sbjct: 185 ARMNNIYGPNQW--DVKVVPRFIEIAKVRGEYTIQGSGKQLRSWLFVDDASAGLKAVCEK 242
Query: 342 GDHVGPFNLGNPGEFTMLELAEVVQEIIDRN-ARIEFRPNTEDDPHKRKPD------ITK 394
G+ +NLG E + +LA+ +QE +D R P + P + D I K
Sbjct: 243 GELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLISIEK 302
Query: 395 AKQLLGWEPRVTLRKGLPLMVA 416
AK LGWEP + G+ VA
Sbjct: 303 AKNDLGWEPTTSFDDGMRHTVA 324
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 248 (92.4 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 87/332 (26%), Positives = 150/332 (45%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVD----NYFTGKKDNLIHHFGNPRFELIRHDV 172
R+LVTGGAGF+ SH++ L++ + ++++ +Y K NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLK-NLEPVSNKQNYKFIQGDI 77
Query: 173 VEPI----LLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RF 224
+ L E ++I + A+ H + V+ + NV GT ++ A +F
Sbjct: 78 CDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEKF 137
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ ST EVYG L E+ +P + Y K AE Y I R
Sbjct: 138 IYVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH 344
N YGP + +V+ F++ ++G G Q R+F + +D+VE + ++
Sbjct: 193 SSNVYGPHQYPE--KVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGE 250
Query: 345 VGP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFR---PNTEDDPHK--RKPDITKAKQ 397
G +N+G E ++++LA E++Q I + N+ E D PH R P ++
Sbjct: 251 PGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIH 310
Query: 398 LLGWEPRVTLRKGLPLMVADFRHRIFGDQKEA 429
LGW+P+V +G+ V +R F + K A
Sbjct: 311 SLGWKPKVPWEEGIKKTVEWYREN-FHNWKNA 341
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 241 (89.9 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 81/314 (25%), Positives = 141/314 (44%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDR--GDSVIVVDNY-FTGKKDNLIHHFGNPRF---ELIR 169
+R+LVTGGAGF+G++ V + D+V V+D + G++++L R ++
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDAIRLVQGDITD 60
Query: 170 HDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 229
++V ++ E D + H A + + NP + TNV+GT +L +R G R ST
Sbjct: 61 AELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHIST 120
Query: 230 SEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTY 289
EVYGD +A + P S Y K A+ L + R G+ A I+ N Y
Sbjct: 121 DEVYGDLELDDRAR--FTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSNNY 178
Query: 290 GPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PF 348
GP ++ + + + L +YG G R + V D + R+++ +G +
Sbjct: 179 GPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGRTY 236
Query: 349 NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQL--LGWEPRVT 406
+ + GE L + + ++DR+ +F T+ H + I + L W P+ T
Sbjct: 237 LISSEGERDNLTVLRTLLRLMDRDPD-DFDHVTDRVGHDLRYAIDPSTLYDELCWAPKHT 295
Query: 407 -LRKGLPLMVADFR 419
+GL + +R
Sbjct: 296 DFEEGLRTTIDWYR 309
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 235 (87.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 79/303 (26%), Positives = 134/303 (44%)
Query: 116 LRILVTGGAGFVGSHLVDRLMD--RGDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDV 172
+R+LVTGGAGF+G++ V + R S+ V+D + G +++L R L++ D+
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVAD--RIRLVQGDI 58
Query: 173 VEPILL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 227
+ L+ E D + H A + +P + +NVVGT +L +R R
Sbjct: 59 TDAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 228 STSEVYGD-PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
ST EVYGD L +P + P S Y K A+ L + R G+ A I+
Sbjct: 119 STDEVYGDLELDNPAR---FNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCS 175
Query: 287 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG 346
N YGP ++ + + + L +YG G R + V D + R++ +G
Sbjct: 176 NNYGPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIG 233
Query: 347 -PFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKP--DITKAKQLLGWEP 403
+ +G E L + + +++ R+ +F T+ H + D + + LGW P
Sbjct: 234 RTYLIGAECERNNLTVMRTILKLMGRDPD-DFDHVTDRAGHDLRYAIDPSTLQDELGWAP 292
Query: 404 RVT 406
+ T
Sbjct: 293 KHT 295
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 242 (90.2 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 74/272 (27%), Positives = 129/272 (47%)
Query: 117 RILVTGGAGFVGSHLVDRLMDR--GDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVV 173
+IL+TGGAGF+GSHL L + +IV+D + +NL F+ + +++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 174 EPILLE-------VDQIYHLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVGAR-F 224
+ LLE +D + HLA + V F +K + N++GT +L K + F
Sbjct: 71 DSELLENIFEKEKIDIVIHLAA-YTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKF 129
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNP-------IGVRSCYDEGKRTAETLTMDYHRGLG 277
+ ST EVYG L + ++N + + Y K AE L Y++
Sbjct: 130 IYVSTDEVYGSGLIEDNDDNN-NSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 278 IEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL- 336
+ I R N YGP+ + +++ F+ L + T++G GK TR++ ++ D+V
Sbjct: 189 LPVIITRANNIYGPKQYPE--KIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFD 246
Query: 337 IRLMEGDHVGPFNLGNPGEFTMLELAEVVQEI 368
I L +G+ +N+G E + L++A+ + I
Sbjct: 247 IILRKGEIGNVYNIGTDFEISNLDVAKKIINI 278
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 236 (88.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 73/274 (26%), Positives = 133/274 (48%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIV-VDNY-FTGKKDNLIHHFGNPRFELIRHDV- 172
+RILVTGGAGF+GS LV L+++ +SV++ D + ++L N R+ ++ D+
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 173 ----VEPIL--LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+E +L + D + HLA + P + I+TN+VGT +L + + +
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACR---SYYQT 117
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGV---RSCYDEG------KRTAETLTMDYHRGLG 277
++ L H + +G++ G+ S YD K +A+ L +HR
Sbjct: 118 LGQAQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYA 177
Query: 278 IEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLI 337
+ I N YGP + +++ V+ AL+ +PL +YG+G+Q R + +V D V+ L
Sbjct: 178 LPIVITNCSNNYGPFQYPE--KLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALY 235
Query: 338 RLMEGDHVGP-FNLGNPGEFTMLELAEVVQEIID 370
+ +G +N+G E T L + + +++
Sbjct: 236 LVATQGQLGQTYNIGGSCEQTNLTVVRHICSLLE 269
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 238 (88.8 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 85/347 (24%), Positives = 155/347 (44%)
Query: 103 AGGKVPLGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVD----NYFTGKKDNLIH 158
+G V + R R+LVTGGAGF+ SH+V L+ + ++++ +Y K NL
Sbjct: 10 SGPPVREEVPRFEKRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLK-NLET 68
Query: 159 HFGNPRFELIRHDVVEPILLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGT 210
++ I+ D+ EP ++ +D + H A V F + ++ NV GT
Sbjct: 69 VSEKENYKFIQGDICEPHFIKQLFETEKIDIVLHFAAQTH-VDLSFWHALEFTYVNVYGT 127
Query: 211 LNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLT 269
++ A +F+ ST EVYG E+ +P + Y K AE
Sbjct: 128 NVLVAAAHEANVEKFVYVSTDEVYGGSTDQEFDES-----SPKCPTNPYASSKAAAECFV 182
Query: 270 MDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 329
Y I R N YGP + +V+ F++ + ++G G Q R+F +
Sbjct: 183 QSYWERYQFPVVITRSSNVYGPHQYPE--KVIPKFISLLQQNRKCCIHGSGLQRRNFLYA 240
Query: 330 SDLVEGLIRLMEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNA---RIE-FRPNTEDD 384
+D+VE + +++ G +N+G E ++++LA+ + +I + + +E + +D
Sbjct: 241 TDVVEAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDR 300
Query: 385 PHK--RKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRIFGDQKEA 429
P R P ++ LGW P+V ++G+ + ++ F + K A
Sbjct: 301 PTNDLRYPMSSEKMHNLGWRPKVPWKEGIKKTIEWYKEN-FHNWKNA 346
>UNIPROTKB|C9J3T9 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00915766 ProteinModelPortal:C9J3T9 SMR:C9J3T9 STRING:C9J3T9
Ensembl:ENST00000436241 ArrayExpress:C9J3T9 Bgee:C9J3T9
Uniprot:C9J3T9
Length = 52
Score = 223 (83.6 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 40/51 (78%), Positives = 45/51 (88%)
Query: 197 FNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWG 247
+NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP HPQ+E YWG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWG 52
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 232 (86.7 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 76/283 (26%), Positives = 129/283 (45%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNP----RFELIRHDV 172
L+TG AGF+GS+L+++L+ +VI +DN+ TG++ NL + RF I D+
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 173 -----VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 226
E ++ VD + H A S +P+ T N+ G LNML AK + F
Sbjct: 79 RDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTY 138
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
++S YGD P+ E GN P+ S Y K E Y R G E R F
Sbjct: 139 AASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIGLRYF 193
Query: 287 NTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE-GLIRLMEGD 343
N +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+ ++
Sbjct: 194 NVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAATAAS 253
Query: 344 HVGP--FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTED 383
+N+ T+ +L +++ ++ N + PN D
Sbjct: 254 EAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRD 296
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 65/264 (24%), Positives = 113/264 (42%)
Query: 164 RFELIRHDV-----VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 218
RF I D+ E ++ VD + H A S +P+ T N+ G LNML AK
Sbjct: 70 RFSFINGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK 129
Query: 219 RVGAR-FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG 277
+ F ++S YGD P+ E GN P+ S Y K E Y R G
Sbjct: 130 EAEVKSFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYG 184
Query: 278 IEARIARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE- 334
E R FN +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+
Sbjct: 185 FETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQM 244
Query: 335 GLIRLMEGDHVGP--FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTED----DPHK 387
++ +N+ T+ +L +++ ++ N + PN D D
Sbjct: 245 NILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRH 304
Query: 388 RKPDITKAKQLLGWEPRVTLRKGL 411
+ D++KA LG++ + +G+
Sbjct: 305 SQADVSKAVTRLGYQYTHKILEGI 328
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 232 (86.7 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 76/283 (26%), Positives = 129/283 (45%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNP----RFELIRHDV 172
L+TG AGF+GS+L+++L+ +VI +DN+ TG++ NL + RF I D+
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 173 -----VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 226
E ++ VD + H A S +P+ T N+ G LNML AK + F
Sbjct: 79 RDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTY 138
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
++S YGD P+ E GN P+ S Y K E Y R G E R F
Sbjct: 139 AASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIGLRYF 193
Query: 287 NTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE-GLIRLMEGD 343
N +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+ ++
Sbjct: 194 NVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAATAAS 253
Query: 344 HVGP--FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTED 383
+N+ T+ +L +++ ++ N + PN D
Sbjct: 254 EAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRD 296
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 65/264 (24%), Positives = 113/264 (42%)
Query: 164 RFELIRHDV-----VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 218
RF I D+ E ++ VD + H A S +P+ T N+ G LNML AK
Sbjct: 70 RFSFINGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK 129
Query: 219 RVGAR-FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG 277
+ F ++S YGD P+ E GN P+ S Y K E Y R G
Sbjct: 130 EAEVKSFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYG 184
Query: 278 IEARIARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE- 334
E R FN +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+
Sbjct: 185 FETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQM 244
Query: 335 GLIRLMEGDHVGP--FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTED----DPHK 387
++ +N+ T+ +L +++ ++ N + PN D D
Sbjct: 245 NILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRH 304
Query: 388 RKPDITKAKQLLGWEPRVTLRKGL 411
+ D++KA LG++ + +G+
Sbjct: 305 SQADVSKAVTRLGYQYTHKILEGI 328
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 224 (83.9 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 78/293 (26%), Positives = 131/293 (44%)
Query: 108 PLGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFEL 167
P R+ R+L+ G GF+G+HL +RL+ R D V G D + +P F
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLL-REDHYEVY-GLDIGS-DAISRFLNHPHFHF 364
Query: 168 IRHDV------VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
+ D+ +E + + D + L A+P+ Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 222 ARFLLTSTSEVYGDPLQHPQAETYWGN--VNPIGV-RSCYDEGKRTAETLTMDYHRGLGI 278
R + STSEVYG E + N V P+ R Y K+ + + Y G+
Sbjct: 425 KRIIFPSTSEVYGMCSDKYFDEDH-SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGL 483
Query: 279 EARIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 332
+ + R FN GPR+ I R ++ + + P+ + GKQ R F + D
Sbjct: 484 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 543
Query: 333 VEGLIRLME--GDHV-GPF-NLGNP-GEFTMLELAEVVQEIIDRNA-RIEFRP 379
+E L R++E G+ G N+GNP E ++ EL E++ +++ R F P
Sbjct: 544 IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPP 596
Score = 60 (26.2 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 384 DPHKRKPDITKAKQLLGWEPRVTLRK 409
D RKP I A + L WEP++ +++
Sbjct: 615 DVEHRKPSIRNAHRCLDWEPKIDMQE 640
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 229 (85.7 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 82/320 (25%), Positives = 145/320 (45%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY----FTGKKDNLIHHFG-NPRFELIRHDV 172
+L+TGG GF+GS+ ++ ++ + + NY F ++ +PR++ + +
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFI-NYDKLAFGASPLHVEKEIRESPRYKFVEAAL 69
Query: 173 VE-PILL------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGL---AKRVGA 222
+ P L+ EVD + H A + + TI+ N++ T +L + G
Sbjct: 70 EDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKGV 129
Query: 223 RFLL-TSTSEVYGDPLQH--PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIE 279
+ L+ ST EVYGD + P++E+ NP Y K E + Y +
Sbjct: 130 KKLVHISTDEVYGDSFEDTTPKSESA-SLPNPTNP---YAASKAACEMVIRSYWHSYKLP 185
Query: 280 ARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRL 339
+ R+ N YGPR +++ F AL +P + GDG TRS+ +V D E + R+
Sbjct: 186 YVMVRMNNVYGPRQI--HTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRV 243
Query: 340 -MEGDHVGPFNLGNPGEFTMLELAEV----VQEIIDRNARIE-FRPNTEDDPHKRKP--D 391
+EG +N+G E T +EL ++ V ++++R F P + H R+ D
Sbjct: 244 ALEGTLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPTFAPIPDRPYHDRRYYID 303
Query: 392 ITKAKQLLGWEPRVTLRKGL 411
+K + +GW+ +GL
Sbjct: 304 FSKIRNAMGWQCTTPFSEGL 323
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 230 (86.0 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 83/307 (27%), Positives = 139/307 (45%)
Query: 118 ILVTGGAGFVGSHLVDRLM--DRGDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDV-- 172
+LVTGGAGF+GS+ ++ + + G VI +D + G NL NP + ++ D+
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFVKGDIGD 69
Query: 173 ---VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR---VGA-- 222
V IL E +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 70 ADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIE 129
Query: 223 RFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
RF S D + ET Y+ P+ S Y K ++ L Y+ G+
Sbjct: 130 RFRFLHVST---DEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPVL 186
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
R N YGP + +++ + + +PL VYGDG+ R + V D + +++
Sbjct: 187 TTRCSNNYGPFQFPE--KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETVLK 244
Query: 342 GDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLG 400
G G FN+G E+ +++ ++ +++D R+ RP E + IT K LG
Sbjct: 245 GGKPGEVFNVGGNNEWFNIDIVHLLCDLLDE--RLG-RPGGES-----RGLITFVKDRLG 296
Query: 401 WEPRVTL 407
+ R +
Sbjct: 297 HDRRYAI 303
Score = 216 (81.1 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 76/264 (28%), Positives = 121/264 (45%)
Query: 171 DVVEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR---VGA--- 222
D+V IL E +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 71 DLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIER 130
Query: 223 -RFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
RFL ST EVYG ET Y+ P+ S Y K ++ L Y+ G+
Sbjct: 131 FRFLHVSTDEVYGT-----LGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 281 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
R N YGP + +++ + + +PL VYGDG+ R + V D + ++
Sbjct: 186 LTTRCSNNYGPFQFPE--KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETVL 243
Query: 341 EGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTED--------DP--HKRK 389
+G G FN+G E+ +++ ++ +++D R+ RP E D H R+
Sbjct: 244 KGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDE--RLG-RPGGESRGLITFVKDRLGHDRR 300
Query: 390 PDIT--KAKQLLGWEPRVTLRKGL 411
I+ K K+ LGWEP T +G+
Sbjct: 301 YAISAAKIKRELGWEPSYTFERGI 324
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 225 (84.3 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 86/313 (27%), Positives = 146/313 (46%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV-EPI 176
ILVTGGAG++GSH+V +L + + V+VVDN G K + + R +LI D E +
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAV-----DTRAKLIVGDFGDENL 56
Query: 177 LLEVDQIY------HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTST 229
LLE+ + Y H+A + P K + N+ TL++L + + + + +ST
Sbjct: 57 LLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSST 116
Query: 230 SEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGL-GIEARIARIFNT 288
+ VYG+P + P E + P + Y K E ++++R + G R FN
Sbjct: 117 AAVYGEPEKWPITEDF-----PQKPTNVYGYSKLVIEQC-LEWYRQIHGFNYVSLRYFNA 170
Query: 289 YG--PRMCI-DDGRVVSNFVAQALR-----KEPLTVYG------DGKQTRSFQFVSDLVE 334
G P I +D ++ + + +E LTV+G DG R + V+DL E
Sbjct: 171 AGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAE 230
Query: 335 G-LIRL--MEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPD 391
++ L + D G +NLGN F++ E+ +V +E+ ++ + DP
Sbjct: 231 AHILALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLVAS 290
Query: 392 ITKAKQLLGWEPR 404
K ++ L + P+
Sbjct: 291 SEKIQKELNFTPK 303
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 223 (83.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 87/327 (26%), Positives = 144/327 (44%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRH-DVVE 174
+++ +TG G +GSHL + L+ G V Y D F ++ V +
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDVYAT--YCRPTIDPSDLQFNGAEVDITDWCSVYD 58
Query: 175 PIL-LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSE 231
I D ++HLA + P PV+T+ TN+VGT + +RV A+ ++ +S
Sbjct: 59 SIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKIIVAGSSA 118
Query: 232 VYG--DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTY 289
YG DP + P E + P+ Y K + L YH+ G+ +ARIFN
Sbjct: 119 EYGFVDPSEVPINERR--ELRPLHP---YGVSKAATDMLAYQYHKSYGMHTVVARIFNCT 173
Query: 290 GPRMCIDDGRVVSNFVAQA--LRKEP----LTVYGDGKQTRSFQFVSDLVEGLIRLMEGD 343
GPR G +S+FV + L P + V G+ K R+ V DL L+ +++
Sbjct: 174 GPRKV---GDALSDFVRRCTWLEHHPEQSAIRV-GNLKTKRTIVDVRDLNRALMLMLDKG 229
Query: 344 HVGP-FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKP--------DITK 394
G +N+G G E+ +V++++I R + P E DP +P D +K
Sbjct: 230 EAGADYNVG--GSIAY-EMGDVLKQVIAACKRDDIVP--EVDPALLRPTDEKIIYGDCSK 284
Query: 395 AKQLLGWEPRVTLRKGLPLMVADFRHR 421
+ GW+ + L + + M +R +
Sbjct: 285 LAAITGWQQEICLTQTIADMFDYWRSK 311
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 200 (75.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 68/240 (28%), Positives = 109/240 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN----YFTGKKDNLIHHFGNPRFELIRHD 171
++ LVTG AGF+GS +V+RL G V+ +DN Y K + + F I+ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 172 VVEP-ILLEV------DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVGA 222
+ + ++ E+ D++ HLA A V Y NP+ +N++G LN+L G
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 223 RFLLTSTSEVYGDPLQHPQAETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
+ S+S VYG L + + V+ P+ S Y K++ E + Y I
Sbjct: 120 HLIYASSSSVYG--LNNKVPFSTKDTVDHPV---SLYAATKKSNELMAHSYSHLYNIPTT 174
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
R F YG D + F + L + + + +G R F V D+VEG+IR+ +
Sbjct: 175 GLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIAD 232
Score = 64 (27.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 11/72 (15%), Positives = 37/72 (51%)
Query: 348 FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
+N+G+ ++++ + +++ + A+ FR D ++ D + + P++++
Sbjct: 258 YNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISV 317
Query: 408 RKGLPLMVADFR 419
++G+ +V F+
Sbjct: 318 KEGVAELVVWFK 329
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 200 (75.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 68/240 (28%), Positives = 109/240 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN----YFTGKKDNLIHHFGNPRFELIRHD 171
++ LVTG AGF+GS +V+RL G V+ +DN Y K + + F I+ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 172 VVEP-ILLEV------DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVGA 222
+ + ++ E+ D++ HLA A V Y NP+ +N++G LN+L G
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 223 RFLLTSTSEVYGDPLQHPQAETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
+ S+S VYG L + + V+ P+ S Y K++ E + Y I
Sbjct: 120 HLIYASSSSVYG--LNNKVPFSTKDTVDHPV---SLYAATKKSNELMAHSYSHLYNIPTT 174
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
R F YG D + F + L + + + +G R F V D+VEG+IR+ +
Sbjct: 175 GLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIAD 232
Score = 64 (27.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 11/72 (15%), Positives = 37/72 (51%)
Query: 348 FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
+N+G+ ++++ + +++ + A+ FR D ++ D + + P++++
Sbjct: 258 YNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISV 317
Query: 408 RKGLPLMVADFR 419
++G+ +V F+
Sbjct: 318 KEGVAELVVWFK 329
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 210 (79.0 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 71/275 (25%), Positives = 126/275 (45%)
Query: 110 GLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHF-GNPRFELI 168
G + + R+L+ G GF+G+HL +RL+ R D D Y + I +P F +
Sbjct: 313 GRKPRRTRVLILGVNGFIGNHLSERLL-RDDKY---DVYGLDIGSDAIERLRSHPNFHFV 368
Query: 169 RHDV------VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 222
D+ +E + + D + L A+P+ Y NP++ + + L ++ +
Sbjct: 369 EGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNK 428
Query: 223 RFLLTSTSEVYGDPLQHPQAETYWGN--VNPIGV-RSCYDEGKRTAETLTMDYHRGLGIE 279
R + STSEVYG Q + N V PI R Y K+ + + Y G+
Sbjct: 429 RVIFPSTSEVYG-MCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG-AKGLN 486
Query: 280 ARIARIFNTYGPRMC-IDDGRV-----VSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 333
+ R FN GPR+ +D R+ ++ + + P+ ++ G+Q R F ++D +
Sbjct: 487 FTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGI 546
Query: 334 EGLIRLMEGDHV---GPF-NLGNP-GEFTMLELAE 363
E L R+++ ++ G N+GNP E ++ +L E
Sbjct: 547 EALARIVDNENDCCNGQIINIGNPDNEASIRQLGE 581
Score = 68 (29.0 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 384 DPHKRKPDITKAKQLLGWEPRVTL 407
D RKP I AK+LL WEP V +
Sbjct: 617 DVEHRKPSIDNAKRLLNWEPTVEM 640
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 222 (83.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 91/323 (28%), Positives = 138/323 (42%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPIL 177
+LVTGGAG++GSH+V +L + G +V+V DN TG D L+H +L ++ +
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHGERLVTGDLSDTARLDALF 62
Query: 178 LEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 234
+E + H A P+K N TLN+LG + G RF+ +ST+ VYG
Sbjct: 63 VEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSSTAAVYG 122
Query: 235 DPLQHPQAE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYG--P 291
P AE + +NP G K +E + D G+ + R FN G P
Sbjct: 123 IPDSGVAAEESATVPINPYGT------SKLMSEWMLRDVCAAHGMRSVALRYFNVAGADP 176
Query: 292 RMCIDDGRV-------VSNFVAQALRKEPLTVYG------DGKQTRSFQFVSDLVEG--- 335
+ + VS A LR + + ++G DG R + V DL
Sbjct: 177 QARMGQRTPEATHLIKVSCQAALGLR-DKVCIFGTDYPTPDGTGIRDYIHVEDLASAHLA 235
Query: 336 -LIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITK 394
L L +G N+G ++ E+ ++V+ + + E P DP +
Sbjct: 236 ALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRRPGDPPSLVARADR 295
Query: 395 AKQLLGWEPRVTLRKGLPLMVAD 417
A+ LLGW PR L +VAD
Sbjct: 296 ARTLLGWTPRYD---NLETIVAD 315
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 141 (54.7 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 46/131 (35%), Positives = 70/131 (53%)
Query: 255 RSCYDEGKRTAETLTMDYHRGL--GIEARIARIFNTYGPRMC----ID---DG--RVVSN 303
R Y K+ E L Y G G+E I R FN GPRM ID +G RV++
Sbjct: 182 RWSYACAKQLIERLV--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
Query: 304 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGD-----HVGPFNLGNPG-EFT 357
F LR+EPL + G+ R+F +++D +E ++ ++E H+ FN+GNP E T
Sbjct: 240 FSNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHI--FNVGNPNNEVT 297
Query: 358 MLELAEVVQEI 368
+ +LAE++ E+
Sbjct: 298 VRQLAEMMTEV 308
Score = 135 (52.6 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 102 NAGGKVPL-GLQRKSLRILVTGGAGFVGSHLVDRLM-DRGDSVIVVDNYFTGKKDNL--- 156
N +V L G + L I + G GF+GSHL ++L+ + V+ +D Y K L
Sbjct: 3 NGANRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPD 62
Query: 157 -IHHFGNPRFELI--RHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 212
+ G +F I +HD +E ++ D I +LA +P Y P+ TI +N + L
Sbjct: 63 TVEWSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALP 122
Query: 213 MLGLAKRVGARFLLTSTSEVYG 234
++ R + ST EVYG
Sbjct: 123 VVKYCSENNKRLIHFSTCEVYG 144
Score = 95 (38.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 348 FNLGNPG-EFTMLELAEVVQEI--------------IDRNARIEFRPNTEDDPHKRKPDI 392
FN+GNP E T+ +LAE++ E+ +D +++ EF DD KR PD+
Sbjct: 287 FNVGNPNNEVTVRQLAEMMTEVYAKVSGEGAIESPTVDVSSK-EFYGEGYDDSDKRIPDM 345
Query: 393 TKAKQLLGWEPRVTLRKGLPLMVADFRHRIFGD 425
T + LGW P+ +L L + ++HR + +
Sbjct: 346 TIINRQLGWNPKTSLWDLLESTLT-YQHRTYAE 377
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 222 (83.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 74/249 (29%), Positives = 119/249 (47%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVD---NYFTG--KKDNL--IHHFGNPRFELI 168
++ILVTG AGF+GS + RL+ G SV VD Y+ K+D + F + R E I
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 169 R---HDVVEPILLE--VDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA 222
R + +E + + + H A A V Y + P I N+VG+ N++ L++R G
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAG-VRYSLDHPRDFIDANIVGSFNIIDLSRRHGT 119
Query: 223 RFL-LTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
+ L + STS YG + P E + P + + Y K +E + + G+
Sbjct: 120 QHLVMASTSSAYGANQKFPFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTT 175
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
+ R F+ YGP D + F + + +P+ V+ G R F ++ DLVE + RLM+
Sbjct: 176 VLRFFSVYGPWGRPDMAFFL--FTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMD 233
Query: 342 -----GDHV 345
G+H+
Sbjct: 234 TPPVVGNHI 242
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 60/259 (23%), Positives = 101/259 (38%)
Query: 181 DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGARFL-LTSTSEVYGDPLQ 238
+ + H A A V Y + P I N+VG+ N++ L++R G + L + STS YG +
Sbjct: 78 EMVLHFAAQAG-VRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQHLVMASTSSAYGANQK 136
Query: 239 HPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGP----RMC 294
P E + P + + Y K +E + + G+ + R F+ YGP M
Sbjct: 137 FPFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTTVLRFFSVYGPWGRPDMA 192
Query: 295 -------IDDGRVVSNFVAQALRKEPLTVYGDGKQT-RSFQFVSDLVEGLIRLMEGDHVG 346
I G+ + F L ++ T D + R +V ++ GD +
Sbjct: 193 FFLFTDKIFKGQPIDVFNHGDLLRD-FTYIDDLVEAIRRLMDTPPVVGN--HIIRGDSLS 249
Query: 347 PF------NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLG 400
P N+GN +++ E ++ I R A D + D+ L G
Sbjct: 250 PVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGDVKQTFADVRLLDALTG 309
Query: 401 WEPRVTLRKGLPLMVADFR 419
+ P R G+ V +R
Sbjct: 310 YTPDTDYRTGIARFVDWYR 328
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 220 (82.5 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 85/316 (26%), Positives = 143/316 (45%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSV--IVVD--NYFTGKKD-NLIHHFGNPRFELIRHD 171
RI+V+GGAGF+G H + ++ + + +D NY + + + F N FE + D
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSN--FEFVHLD 65
Query: 172 VVEPI--LLEVDQ----IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLG---LAKRVG 221
+ + + LL++ + I + A +S V F +PV K N++ T N+L L +G
Sbjct: 66 LSDNLEYLLKITKNTTDIINFAAESS-VDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 222 ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
FL ST EVYGD + E +NP Y K + + Y +
Sbjct: 125 Y-FLHISTDEVYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPIT 178
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
I R N YGP + +++ + K+P+ V+G G R + +V D+V + +
Sbjct: 179 ILRPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWI 236
Query: 342 GDHVGP----FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQ 397
+ + +N+G E L L +++ EI R I+F + + D TK
Sbjct: 237 KNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTKIHN 295
Query: 398 LLGWEPRVTLRKGLPL 413
L GW P+++L +GL L
Sbjct: 296 L-GWSPKISLVQGLQL 310
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 220 (82.5 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 85/316 (26%), Positives = 143/316 (45%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSV--IVVD--NYFTGKKD-NLIHHFGNPRFELIRHD 171
RI+V+GGAGF+G H + ++ + + +D NY + + + F N FE + D
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSN--FEFVHLD 65
Query: 172 VVEPI--LLEVDQ----IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLG---LAKRVG 221
+ + + LL++ + I + A +S V F +PV K N++ T N+L L +G
Sbjct: 66 LSDNLEYLLKITKNTTDIINFAAESS-VDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 222 ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
FL ST EVYGD + E +NP Y K + + Y +
Sbjct: 125 Y-FLHISTDEVYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPIT 178
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
I R N YGP + +++ + K+P+ V+G G R + +V D+V + +
Sbjct: 179 ILRPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWI 236
Query: 342 GDHVGP----FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQ 397
+ + +N+G E L L +++ EI R I+F + + D TK
Sbjct: 237 KNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTKIHN 295
Query: 398 LLGWEPRVTLRKGLPL 413
L GW P+++L +GL L
Sbjct: 296 L-GWSPKISLVQGLQL 310
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 151 (58.2 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 49/184 (26%), Positives = 78/184 (42%)
Query: 237 LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
+QH + P S Y K +++ L + R G + N YGP +
Sbjct: 165 IQHSTLPLFT-ETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPE 223
Query: 297 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP-FNLGNPGE 355
+++ + AL +PL +YG G Q R + +V D L +++ VG +N+G E
Sbjct: 224 --KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNE 281
Query: 356 FTMLELAEVVQEIID----RNARI-EFRPNTEDDP-HKRKP--DITKAKQLLGWEPRVTL 407
LE+ + + I+D +N E D P H R+ D TK L W+P+ T
Sbjct: 282 KRNLEVVQTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETF 341
Query: 408 RKGL 411
GL
Sbjct: 342 ETGL 345
Score = 119 (46.9 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 35/112 (31%), Positives = 57/112 (50%)
Query: 116 LRILVTGGAGFVGSHLVDRLM-DRGDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVV 173
++ILVTGGAGF+GS +V ++ + D V+ VD + G ++L +PR+ + D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRYTFEKVDIC 60
Query: 174 EPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 218
+ LE D + HLA + I+TN+VGT +L A+
Sbjct: 61 DRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
Score = 72 (30.4 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 27/74 (36%), Positives = 34/74 (45%)
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK---------RVGA-RFLL 226
L + D + HLA + I+TN+VGT +L A+ R A RF
Sbjct: 71 LHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNTERKSAFRFHH 130
Query: 227 TSTSEVYGDPLQHP 240
ST EVYGD L HP
Sbjct: 131 ISTDEVYGD-LPHP 143
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 139 (54.0 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 46/131 (35%), Positives = 69/131 (52%)
Query: 255 RSCYDEGKRTAETLTMDYHRGL--GIEARIARIFNTYGPRMC----ID---DG--RVVSN 303
R Y K+ E L Y G G+E I R FN GPRM ID +G RV++
Sbjct: 182 RWSYACAKQLIERLV--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
Query: 304 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGD-----HVGPFNLGNPG-EFT 357
F LR+EPL + G+ R+F ++ D +E ++ ++E H+ FN+GNP E T
Sbjct: 240 FSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHI--FNVGNPNNEVT 297
Query: 358 MLELAEVVQEI 368
+ +LAE++ E+
Sbjct: 298 VRQLAEMMTEV 308
Score = 132 (51.5 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 42/142 (29%), Positives = 66/142 (46%)
Query: 102 NAGGKVPL-GLQRKSLRILVTGGAGFVGSHLVDRLM-DRGDSVIVVDNYFTGKKDNL--- 156
N ++ L G K + I + G GF+GSHL ++LM + V+ +D Y K L
Sbjct: 3 NGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD 62
Query: 157 -IHHFGNPRFELI--RHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 212
+ G +F I +HD +E ++ D +LA +P Y P+ TI +N + L
Sbjct: 63 TVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
Query: 213 MLGLAKRVGARFLLTSTSEVYG 234
++ R + ST EVYG
Sbjct: 123 VVKYCSENNKRLIHFSTCEVYG 144
Score = 91 (37.1 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 348 FNLGNPG-EFTMLELAEVVQEI--------------IDRNARIEFRPNTEDDPHKRKPDI 392
FN+GNP E T+ +LAE++ E+ ID +++ EF DD KR PD+
Sbjct: 287 FNVGNPNNEVTVRQLAEMMTEVYAKVSGETAIESPTIDVSSK-EFYGEGYDDSDKRIPDM 345
Query: 393 TKAKQLLGWEPRVTL 407
T + LGW P+ +L
Sbjct: 346 TIINRQLGWNPKTSL 360
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 80/308 (25%), Positives = 143/308 (46%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDV---- 172
RILVTGGAG+VGS LV +L++ G V V D F G D+ + NP ++ D+
Sbjct: 7 RILVTGGAGYVGSALVPQLLELGYRVTVYDTLFFG--DDFLPK-ENPYLNIVEGDIRDTE 63
Query: 173 -VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 230
++ + D + LAC ++ ++ + + N+ M+ AK G RF+ S+S
Sbjct: 64 RLKQCFKDADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASSS 123
Query: 231 EVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG--LGIEARIARIFNT 288
VYG E + P+ + Y++ K E L + + + R A +
Sbjct: 124 SVYGVSETKDVTEEH-----PLVPLTLYNKYKGMCEPLLFKHQSPEFVCVTIRPATLCG- 177
Query: 289 YGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE--GLIRLMEGDHV 345
Y PR +D +++N A+ +TV+G G Q R V D+ + L+ ++ + +
Sbjct: 178 YAPRQRLDLSVNILTN---HAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDEKI 233
Query: 346 G--PFNLGNPGEFTMLELAEVVQEIIDRN----ARIEFRPNTEDDPHKRKPDITKAKQLL 399
FN+G + +++E+A +V+ I++ A I+ DD + K K+ L
Sbjct: 234 AGETFNVGYENK-SIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRCL 292
Query: 400 GWEPRVTL 407
G+E + ++
Sbjct: 293 GFEAKYSI 300
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 205 (77.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 85/322 (26%), Positives = 145/322 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEP 175
+R L+TG AGFVG +L + L ++ V K N + +++ V+
Sbjct: 1 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPN-VEMIS---LDIMDSQRVKK 56
Query: 176 ILLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK--RVGARFLLTSTSE 231
++ ++ D I+HLA +S N T TNV GTL++L + + R L +SE
Sbjct: 57 VISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSE 116
Query: 232 VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGP 291
YG L P+ E+ N + S Y K + L Y + G++ R FN GP
Sbjct: 117 EYGMIL--PE-ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGP 173
Query: 292 RMCIDDGRVVSNFVAQAL-----RKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG 346
+ G V +F Q + ++EP+ G+ + R F V D+V+ L + G
Sbjct: 174 GQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTG 231
Query: 347 P-FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPD-----ITKAKQL-- 398
+N+ + G T ++ +V+ ++ A + +TE +P + +P I K+L
Sbjct: 232 DVYNVCS-GIGTRIQ--DVLDLLL---AMANVKIDTELNPLQLRPSEVPTLIGSNKRLKD 285
Query: 399 -LGWEPRVTLRKGLPLMVADFR 419
GW+PR+ L K L ++ +R
Sbjct: 286 STGWKPRIPLEKSLFEILQSYR 307
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 207 (77.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 82/291 (28%), Positives = 137/291 (47%)
Query: 146 DNYFTGKKDN--LIHHFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKFN-PVKT 202
D Y K+N L H+G+ L+ + ++ I + ++Y+LA S V F+ PV T
Sbjct: 46 DIYEEKHKENARLFLHYGDITDGLVLNKLIHEI--KPHEVYNLAAQ-SHVRVSFDIPVYT 102
Query: 203 IKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCY 258
++T +GTLN+L K RF S+SE+YGD PQ E+ P RS Y
Sbjct: 103 METIGLGTLNILEAIKNADNAKEIRFYQASSSEMYGDVKSVPQTES-----TPFNPRSPY 157
Query: 259 DEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTVY 317
K A T++Y G+ A +FN PR R +++ +A+ L +Y
Sbjct: 158 ACAKVFAHYQTINYRESYGLHASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIY 217
Query: 318 -GDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNAR-- 374
G+ + R + + D VE + +++ D + + +++ EL E +++ N R
Sbjct: 218 LGNLEAKRDWGYAKDYVEAMWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNLNWRDF 277
Query: 375 --IE---FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA-DFR 419
I+ +RP E D +P KAK+ LGW+P + K + +M+ DF+
Sbjct: 278 VVIDPKYYRP-AEVDLLLGEPK--KAKEKLGWQPNTSFHKLIKIMLEHDFK 325
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 206 (77.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 72/274 (26%), Positives = 121/274 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDR-GDSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVVE 174
+IL+TGGAGF+GS LV +++ D+V+VVD + G +L + RF + D+ +
Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 175 PILL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 227
L + D + HLA + P I+TN+VGT +L A+
Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 228 STS-----EVYGDPLQHPQAET--YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
S + D + T ++ P S Y K +++ L + R G+
Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182
Query: 281 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
I N YGP + +++ + AL + L VYG+G+Q R + +V D L +
Sbjct: 183 LITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVA 240
Query: 341 EGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNA 373
VG +N+G E L++ E + E+++ A
Sbjct: 241 TTGKVGETYNIGGHNERKNLDVVETICELLEELA 274
Score = 162 (62.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 58/213 (27%), Positives = 92/213 (43%)
Query: 212 NMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMD 271
N L K+ RF ST EVYGD H + ++ P S Y K +++ L
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGD--LH-STDDFFTETTPYAPSSPYSASKASSDHLVRA 173
Query: 272 YHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 331
+ R G+ I N YGP + +++ + AL + L VYG+G+Q R + +V D
Sbjct: 174 WLRTYGLPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVED 231
Query: 332 LVEGLIRLMEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNAR------IEFRPN---T 381
L + VG +N+G E L++ E + E+++ A +R
Sbjct: 232 HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFV 291
Query: 382 EDDP-HKRKP--DITKAKQLLGWEPRVTLRKGL 411
D P H + D +K + LGW P+ T G+
Sbjct: 292 ADRPGHDLRYAIDASKIARELGWLPQETFESGM 324
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 179 (68.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 72/240 (30%), Positives = 106/240 (44%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN---YFTG--KKDNLIHHFGNPRFELIRH 170
++ LVTG AGF+G+++ RL G V+ +DN Y+ K L F I+
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 171 DVV--EPIL-LEVDQ----IYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVG 221
D+ E I L Q + HLA A V Y NP+ +N+VG L +L G
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAG-VRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 222 ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
+ S+S VYG + P + T +PI S Y K+ E ++ Y +
Sbjct: 120 EHLVYASSSSVYGLNQKMPFS-TEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPTT 175
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
R F YGP D + F L E + VY G +R F ++ D+VEG+IR+ +
Sbjct: 176 GLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQD 233
Score = 66 (28.3 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 348 FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
FN+GN +L+ ++ + A+ +F P D H D + +G++ +V +
Sbjct: 259 FNIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDI 318
Query: 408 RKGLPLMVADFRH 420
G+ V +R+
Sbjct: 319 DTGVAKFVDWYRN 331
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 179 (68.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 72/240 (30%), Positives = 106/240 (44%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN---YFTG--KKDNLIHHFGNPRFELIRH 170
++ LVTG AGF+G+++ RL G V+ +DN Y+ K L F I+
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 171 DVV--EPIL-LEVDQ----IYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVG 221
D+ E I L Q + HLA A V Y NP+ +N+VG L +L G
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAG-VRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 222 ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
+ S+S VYG + P + T +PI S Y K+ E ++ Y +
Sbjct: 120 EHLVYASSSSVYGLNQKMPFS-TEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPTT 175
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
R F YGP D + F L E + VY G +R F ++ D+VEG+IR+ +
Sbjct: 176 GLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQD 233
Score = 66 (28.3 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 348 FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
FN+GN +L+ ++ + A+ +F P D H D + +G++ +V +
Sbjct: 259 FNIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDI 318
Query: 408 RKGLPLMVADFRH 420
G+ V +R+
Sbjct: 319 DTGVAKFVDWYRN 331
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 80/304 (26%), Positives = 134/304 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDV--VEP 175
+LVTG G++GS LV +L+++G V VD ++ G D L H P ELI DV ++P
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVDRFYFGS-DKLSQH---PHLELINEDVRRLQP 61
Query: 176 ILL-EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 233
L VD + LA ++ T + N + LAK+ R++L S+ +Y
Sbjct: 62 SLFTNVDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRYILPSSCSIY 121
Query: 234 GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRM 293
G + ET NP+ + +E K E L + R A ++ Y PRM
Sbjct: 122 GFQ-KGAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG-YSPRM 176
Query: 294 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV---GPF-N 349
D ++ V A + + + DG Q R V D + ++ L++ D G N
Sbjct: 177 RFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEINGQIIN 234
Query: 350 LG-NPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDIT--KAKQLLGWEPRVT 406
+G + + L +++ E++ + + DP R ++ K K++L W+P+
Sbjct: 235 VGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNWQPQWD 294
Query: 407 LRKG 410
KG
Sbjct: 295 AAKG 298
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 80/304 (26%), Positives = 134/304 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDV--VEP 175
+LVTG G++GS LV +L+++G V VD ++ G D L H P ELI DV ++P
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVDRFYFGS-DKLSQH---PHLELINEDVRRLQP 61
Query: 176 ILL-EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 233
L VD + LA ++ T + N + LAK+ R++L S+ +Y
Sbjct: 62 SLFTNVDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRYILPSSCSIY 121
Query: 234 GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRM 293
G + ET NP+ + +E K E L + R A ++ Y PRM
Sbjct: 122 GFQ-KGAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG-YSPRM 176
Query: 294 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV---GPF-N 349
D ++ V A + + + DG Q R V D + ++ L++ D G N
Sbjct: 177 RFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEINGQIIN 234
Query: 350 LG-NPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDIT--KAKQLLGWEPRVT 406
+G + + L +++ E++ + + DP R ++ K K++L W+P+
Sbjct: 235 VGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNWQPQWD 294
Query: 407 LRKG 410
KG
Sbjct: 295 AAKG 298
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 84/318 (26%), Positives = 144/318 (45%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
R+ VTG +GFVG HL L ++ + H R++L+ D + +
Sbjct: 4 RLFVTGLSGFVGKHLQAYLAAAHTPWALLP----------VPH----RYDLLEPDSLGDL 49
Query: 177 LLEV-DQIYHLACPAS-PVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEV 232
E+ D + HLA P ++ +P +T++ N++GTLN+L K G FL S+ +V
Sbjct: 50 WPELPDAVIHLAGQTYVPEAFR-DPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDV 108
Query: 233 YGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR 292
YG + A + P R+ Y K AE+L + + G +AR FN GP
Sbjct: 109 YGQVAE--AALPIHEELIP-HPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPG 165
Query: 293 MCIDDGRVVSNFVAQALR-KEPLTV----YGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP 347
D V+++ Q R K+ L GD +R F V D++ +RL+ G
Sbjct: 166 Q--KDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGEAGA 223
Query: 348 -FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAK--QLLGWEPR 404
+N+ + E + EL E++ +I I P +R+ + A+ GW+P
Sbjct: 224 VYNVCSGQEQKIRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSHARLHDTTGWKPE 283
Query: 405 VTLRKGLPLMVADFRHRI 422
+T+++ L +++D+ R+
Sbjct: 284 ITIKQSLRAILSDWESRV 301
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 197 (74.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 71/261 (27%), Positives = 120/261 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFG--NPRFEL--IR 169
+R+LVTGG+G++GSH +L+ G VI++DN K+ L I G +P F IR
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 170 HDVVEPILLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 225
++ + +L +D + H A + P++ NV GTL ++ + + F+
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 226 LTSTSEVYGDPLQHPQAETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGL-GIEARIA 283
+S++ VYGD + P E++ P G +S Y + K E + D + +
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 284 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLVE 334
R FN G D G + +N ++AQ R++ L ++G+ T V D +
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 335 GLIRLMEGDHVGPFNLGN-PG 354
++ L +G V L N PG
Sbjct: 236 -VMDLADGHVVAMEKLANKPG 255
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 197 (74.4 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 68/244 (27%), Positives = 108/244 (44%)
Query: 180 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQ 238
VD I H A S +P+ T N+ G L ML AK + F+ ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 239 HPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDG 298
P+ E G P+ S Y K E +H+ G+ R FN +G R D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 299 --RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNP--G 354
V+ + + E L + GDG+ +R F FV + V+ I + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 355 EFTMLE-LAEVVQEIIDRNARIEFR--PNTED----DPHKRKPDITKAKQLLGWEPRVTL 407
+ T L L ++ + N ++++ P +D D + DI+KAK L+G+EP +
Sbjct: 270 DRTSLNTLFNSLKVALQANG-VDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKI 328
Query: 408 RKGL 411
++G+
Sbjct: 329 QQGI 332
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 68/246 (27%), Positives = 105/246 (42%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL------IHHFGNPRFELIRHDV 172
L+TG AGF+GS+L++ L+ V+ +DN+ TG + N + F ++ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 173 -----VEPILLE----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 223
+ L VD I H A S +P+ T N+ G L ML AK +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 224 -FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
F+ ++S YGD P+ E G P+ S Y K E +H+ G+
Sbjct: 139 SFVYAASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTG 193
Query: 283 ARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
R FN +G R D V+ + + E L + GDG+ +R F FV + V+ I
Sbjct: 194 LRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAA 253
Query: 341 EGDHVG 346
+ G
Sbjct: 254 TANDAG 259
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 197 (74.4 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 68/244 (27%), Positives = 108/244 (44%)
Query: 180 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQ 238
VD I H A S +P+ T N+ G L ML AK + F+ ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 239 HPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDG 298
P+ E G P+ S Y K E +H+ G+ R FN +G R D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 299 --RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNP--G 354
V+ + + E L + GDG+ +R F FV + V+ I + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 355 EFTMLE-LAEVVQEIIDRNARIEFR--PNTED----DPHKRKPDITKAKQLLGWEPRVTL 407
+ T L L ++ + N ++++ P +D D + DI+KAK L+G+EP +
Sbjct: 270 DRTSLNTLFNSLKVALQANG-VDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKI 328
Query: 408 RKGL 411
++G+
Sbjct: 329 QQGI 332
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 68/246 (27%), Positives = 105/246 (42%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL------IHHFGNPRFELIRHDV 172
L+TG AGF+GS+L++ L+ V+ +DN+ TG + N + F ++ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 173 -----VEPILLE----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 223
+ L VD I H A S +P+ T N+ G L ML AK +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 224 -FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
F+ ++S YGD P+ E G P+ S Y K E +H+ G+
Sbjct: 139 SFVYAASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTG 193
Query: 283 ARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
R FN +G R D V+ + + E L + GDG+ +R F FV + V+ I
Sbjct: 194 LRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAA 253
Query: 341 EGDHVG 346
+ G
Sbjct: 254 TANDAG 259
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 194 (73.4 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 96/327 (29%), Positives = 146/327 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSV--IV--VDNYFTGKKDNLIHHFGNPRFELIRH-- 170
R L+TG G GS+L + L+ +G V ++ + T + D+L P L H
Sbjct: 3 RALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYG 62
Query: 171 DVVE-----PIL--LEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAK--RV 220
D+++ +L +E D++Y+LA S V F+ PV T T +G++ +L + RV
Sbjct: 63 DLIDGTRLVTLLSTIEPDEVYNLAAQ-SHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 221 GARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
RF S+SE++G PQ E + P RS Y K + T +Y G+ A
Sbjct: 122 HCRFYQASSSEMFGAS-PPPQNE-----LTPFYPRSPYGAAKVYSYWATRNYREAYGLFA 175
Query: 281 RIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTVY-GDGKQTRSFQFVSDLVEGLIR 338
+FN PR R ++ VA+ VY G+ R + + + VEG+ R
Sbjct: 176 VNGILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWR 235
Query: 339 LMEGDHVGPFNLGNPGEFTMLELAEVVQEI--IDRNARIEF-----RPNTEDDPHKRKPD 391
+++ D F L FT+ E A E +D ++F RP TE D D
Sbjct: 236 MLQTDEPDDFVLATGRGFTVREFARAAFEHAGLDWQQYVKFDQRYLRP-TEVD--SLIGD 292
Query: 392 ITKAKQLLGWEPRVTLRKGLPLMV-AD 417
TKA +LLGW V + +MV AD
Sbjct: 293 ATKAAELLGWRASVHTDELARIMVDAD 319
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 87/341 (25%), Positives = 144/341 (42%)
Query: 22 LDSSPRPSKSVKSFRNPVQYVLRSQRLI--FLFIGIAISSLIFSKLPVRQHQIANPAPLT 79
LD P K ++ + LR Q + F F + LI S L +R NP+ +
Sbjct: 4 LDDIPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLI-SLLFLRSPPSINPS--S 60
Query: 80 TSETTHLSRRRVLYEA-AEVQHVNAGGKVPLGLQRKSLRILVTGGAGFVGSHLVDRLMDR 138
S+ + S R Y A + + + ++ + +LVTG AGFVG+H+ L R
Sbjct: 61 PSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNN-GITVLVTGAAGFVGTHVSAALKRR 119
Query: 139 GDSVIVVDNYFTGKKDNLIHHFGNPRFE-----LIRHDV--VEPI-----LLEVDQIYHL 186
GD VI +DN F D + E ++ D+ VE + ++ + HL
Sbjct: 120 GDGVIGLDN-FNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHL 178
Query: 187 ACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQHPQAE 243
A A V Y NP + +N+ G +N+L + K V + + S+S VYG + P +E
Sbjct: 179 AAQAG-VRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSE 237
Query: 244 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSN 303
+ P S Y K+ E + Y+ G+ R F YGP D
Sbjct: 238 KDKTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFF-- 291
Query: 304 FVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEGLIRLME 341
F L+ + ++++ G R F ++ D+V+G + ++
Sbjct: 292 FTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALD 332
Score = 153 (58.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 66/273 (24%), Positives = 111/273 (40%)
Query: 177 LLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVY 233
++ + HLA A V Y NP + +N+ G +N+L + K V + + S+S VY
Sbjct: 169 IVSFTHVMHLAAQAG-VRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVY 227
Query: 234 GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRM 293
G + P +E + P S Y K+ E + Y+ G+ R F YGP
Sbjct: 228 GLNTKVPFSEKDKTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWG 283
Query: 294 CIDDGRVV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME---------GD 343
D + + + G R F ++ D+V+G + ++ G
Sbjct: 284 RPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGK 343
Query: 344 HVGP-----FNLGNPGEFTMLELAEVVQEIIDRNARIEF--RPNTEDDPHKRKPDITKAK 396
GP FNLGN + +L +++ + A+ P D P +I+ A+
Sbjct: 344 KRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHA-NISLAQ 402
Query: 397 QLLGWEPRVTLRKGLPLMVADFRHRIFGDQKEA 429
+ LG++P L+ GL V + GD+K A
Sbjct: 403 RELGYKPTTDLQTGLKKFVRWYLSYYSGDKKAA 435
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 172 (65.6 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 78/269 (28%), Positives = 121/269 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVV----DNYFTGKKDNLIHHFGNPRFELIRH-- 170
R L+TG +G GS+L + L+ +G V V ++ TG+ D+L P L H
Sbjct: 3 RALITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYG 62
Query: 171 DV-----VEPILLEV--DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVG- 221
D+ + +L EV D+IY+L S V F+ P T + + +GT+ +L + G
Sbjct: 63 DLNDASSINRVLREVRPDEIYNLGAQ-SHVRVSFDVPEYTGEIDALGTVRLLEGIRETGL 121
Query: 222 -ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
RF S+SE+YG ++ PQ ET P RS Y K A +T++Y G+ A
Sbjct: 122 NTRFYQASSSELYGKVVETPQKET-----TPFYPRSPYACAKAYAYYITVNYRESYGMYA 176
Query: 281 RIARIFNTYGPRMCIDDGRVVSNFVAQALR-KEPLT--VY-GDGKQTRSFQFVSDLVEGL 336
+FN PR + V A R K L +Y G+ R + F D VE +
Sbjct: 177 CNGILFNHESPRR--GETFVTRKITRAAGRIKTGLQDRLYLGNLDAKRDWGFAGDYVEAM 234
Query: 337 IRLMEGDHVGPFNLGNPGEFTMLELAEVV 365
+++ F + +++ E AE V
Sbjct: 235 WLMLQQQEADDFVVATGETWSVREFAERV 263
Score = 59 (25.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVAD 417
D KA++ LGW+PRV + GL M+ D
Sbjct: 310 DPAKARRQLGWQPRVDFQ-GLVDMMTD 335
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 190 (71.9 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 70/258 (27%), Positives = 112/258 (43%)
Query: 179 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML--------GL--AKRVGARFLLTS 228
++D + HLA + P I+TN+VGT +L GL K+ RF S
Sbjct: 73 QLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHIS 132
Query: 229 TSEVYGDPLQHPQA----ETY--WGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
T EVYGD L HP ET + S Y K +++ L + R G+ +
Sbjct: 133 TDEVYGD-LPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIV 191
Query: 283 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM-E 341
+ N YGP + +++ + AL + L +YG G Q R + +V D L ++ E
Sbjct: 192 SNCSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTE 249
Query: 342 GDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIE--FRPN---TEDDP-HKRKP--DIT 393
G +N+G E +++ + +++D E +R D P H R+ D
Sbjct: 250 GKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAD 309
Query: 394 KAKQLLGWEPRVTLRKGL 411
K + LGW+P+ T G+
Sbjct: 310 KISRELGWKPQETFESGI 327
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVV 173
++ILVTGGAGF+GS +V +++ DSV+ VD + G ++L + R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFENADIC 60
Query: 174 EP----ILL---EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 218
+ + ++D + HLA + P I+TN+VGT +L A+
Sbjct: 61 DAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 188 (71.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 82/303 (27%), Positives = 127/303 (41%)
Query: 109 LGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
+G R + RILVTGG+G VG + ++++ G + D F KD + R L
Sbjct: 1 MGDPRGTRRILVTGGSGLVG-RAIQKVVEDGARLPGEDWVFVSSKDADLTDAAQTR-ALF 58
Query: 169 RHDVVEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ V+P + HLA + + K+N + + N+ N+L A VG R ++
Sbjct: 59 QQ--VQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNIHINDNVLHSAFEVGVRKVV 110
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIP 170
Query: 286 FNTYGPR--MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVEGLI-R 338
N +GP I+DG V+ + + L K LTV+G G+ R F + DL I
Sbjct: 171 TNVFGPHDNFSIEDGHVLPGLIHKVHLAKSSGSALTVWGTGRPRRQFIYSLDLARLFIWA 230
Query: 339 LMEGDHVGPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAK 396
L E D V P ++G E ++ E AE V E +D + + F D K+ K +
Sbjct: 231 LREYDEVEPIILSVGEEDEVSVQEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNAKLR 290
Query: 397 QLL 399
L
Sbjct: 291 AYL 293
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 188 (71.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 82/303 (27%), Positives = 130/303 (42%)
Query: 109 LGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
+G + S+RILVTGG+G VG + +++ G + D F KD + R L
Sbjct: 1 MGEPQGSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTR-ALF 58
Query: 169 RHDVVEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 --EKVQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVV 110
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIP 170
Query: 286 FNTYGPR--MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVEGLIRL 339
N +GP I+DG V+ + + L K LTV+G G R F + DL + I +
Sbjct: 171 TNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV 230
Query: 340 M-EGDHVGPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAK 396
+ E + V P ++G E ++ E AE V E +D + + F D K+ +K +
Sbjct: 231 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLR 290
Query: 397 QLL 399
L
Sbjct: 291 TYL 293
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 189 (71.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 69/256 (26%), Positives = 110/256 (42%)
Query: 181 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR----VGA------RFLLTSTS 230
D + HLA + P I+TN+VGT +L +A++ +G RF ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134
Query: 231 EVYGDPLQHP-QAET-----YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
EVYGD L HP + E + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTN 193
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGD 343
N YGP + +++ + AL +PL +YG G Q R + +V D L ++ EG
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK 251
Query: 344 HVGPFNLGNPGEFTMLELAEVVQEIIDRNA--RIEFRPN---TEDDP-HKRKP--DITKA 395
+N+G E L++ + +++D +R D P H R+ D K
Sbjct: 252 AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKI 311
Query: 396 KQLLGWEPRVTLRKGL 411
+ LGW+P T G+
Sbjct: 312 SRELGWKPLETFESGI 327
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 186 (70.5 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 78/330 (23%), Positives = 152/330 (46%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY---FTGKKDNL--IHHFGNP-RF--EL 167
+R+ +TGGAGF+GS L L ++ + ++++D T + NL HF N F EL
Sbjct: 1 MRVAITGGAGFIGSQLALNLQEKHE-ILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL 59
Query: 168 IRHDVV-EPILLEVDQ-----IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+ E +L +++ I+H A + F+ K ++TN+ + + L+ +
Sbjct: 60 FAGDINDEKVLKKIEDFKPEIIFHQAAISDTT--VFDQTKVLQTNLNTFKDFIELSIDLN 117
Query: 222 ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
A+ + S++ VYGD + PQ T + P ++ Y K + L Y+ +
Sbjct: 118 AKLIYASSASVYGDA-KSPQ--TVGKDEEP---KNPYAFSKLMMDKLAKKYYDKAHLVG- 170
Query: 282 IARIFNTYGPRMCIDD--GRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVEGLIR 338
R FN YG + +V F Q L K P G + R F ++ D++ +
Sbjct: 171 -LRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVINANLI 229
Query: 339 LMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQL 398
++ G +N+G+ T ++ +++Q+ + + E+ PN ++ + K Q
Sbjct: 230 ALDSK-CGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTE-AKLDQT 287
Query: 399 LGWEPRVTLRKGLPLMVADFRHRIFGDQKE 428
++P+ +L +G+ + + + R+F +KE
Sbjct: 288 WDYQPKFSLEEGIKDYLDEIK-RLF--EKE 314
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 187 (70.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 67/239 (28%), Positives = 105/239 (43%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHDVV 173
+ ILVTGGAG++G+H V L++ G VIV+DN + L + + D++
Sbjct: 1 MTILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGKSVTFYQGDIL 60
Query: 174 EPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
LL+ +D + H A + P+K + NV GTL + + + L+
Sbjct: 61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLV 120
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
S+S VYGDP P E + P G + Y + K E + D H IAR+
Sbjct: 121 FSSSATVYGDPASLPITEDF-----PTGATNPYGQSKLMVEHILADLHHS-DPSWNIARL 174
Query: 286 --FNTYGPR---MCIDDGRVVSN----FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLV 333
FN G + +D + N F+AQ ++E L+V+G+ T V D +
Sbjct: 175 RYFNPVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYI 233
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 57/241 (23%), Positives = 95/241 (39%)
Query: 180 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYGDPLQ 238
+D + H A + P+K + NV GTL + + + L+ S+S VYGDP
Sbjct: 74 IDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLVFSSSATVYGDPAS 133
Query: 239 HPQAETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD 297
P E + G NP G E A+ D + R + + +D
Sbjct: 134 LPITEDFPTGATNPYGQSKLMVE-HILADLHHSDPSWNIA-RLRYFNPVGAHASGLIGED 191
Query: 298 GRVVSN----FVAQAL--RKEPLTVYG------DGKQTRSFQFVSDLVEGLIRLMEGDHV 345
+ N F+AQ ++E L+V+G DG R + V DL G ++ +E
Sbjct: 192 PNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVDLAIGHLKALEKLAT 251
Query: 346 GP----FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGW 401
P +NLG +++L++ + ++ ++ P D D AK L W
Sbjct: 252 KPGLVTYNLGTGQGYSVLDMVKAFEKACGKSIAYLIAPRRPGDIAACYADPDHAKTDLDW 311
Query: 402 E 402
+
Sbjct: 312 Q 312
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 186 (70.5 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 69/256 (26%), Positives = 108/256 (42%)
Query: 181 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----------KRVGARFLLTSTS 230
D + HLA + P I+TN+VGT +L A K+ RF ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHISTD 134
Query: 231 EVYGDPLQHP------QAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
EVYGD L HP +A + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTN 193
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGD 343
N YGP + +++ + AL + L +YG G Q R + +V D L ++ EG
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGK 251
Query: 344 HVGPFNLGNPGEF----TMLELAEVVQEIIDRNARI-EFRPNTEDDP-HKRKP--DITKA 395
+N+G E +L + +++ EI+ + E D P H R+ D K
Sbjct: 252 AGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADKI 311
Query: 396 KQLLGWEPRVTLRKGL 411
+ LGW+P+ T G+
Sbjct: 312 SRELGWKPQETFESGI 327
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVV 173
++ILVTGGAGF+GS +V +++ DSV+ VD + G ++L + R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60
Query: 174 EPILL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 218
+ + + + D + HLA + P I+TN+VGT +L A+
Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 184 (69.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 82/303 (27%), Positives = 128/303 (42%)
Query: 109 LGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
+G S+RILVTGG+G VG + +++ G + + F KD + + L
Sbjct: 1 MGEPHGSMRILVTGGSGLVG-RAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQ-ALF 58
Query: 169 RHDVVEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 QK--VQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGARKVV 110
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIP 170
Query: 286 FNTYGP--RMCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVEGLIRL 339
N +GP I+DG V+ + + L K LTV+G GK R F + DL I +
Sbjct: 171 TNVFGPYDNFNIEDGHVLPGLIHKVHLAKSSDSALTVWGTGKPRRQFIYSLDLARLFIWV 230
Query: 340 M-EGDHVGPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAK 396
+ E V P ++G E ++ E AE V E +D N + F D +K+ K +
Sbjct: 231 LREYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVTFDSTKSDGQYKKTASNGKLR 290
Query: 397 QLL 399
L
Sbjct: 291 SYL 293
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 186 (70.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 72/244 (29%), Positives = 109/244 (44%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVE- 174
L +LVTG AGFVGSH L RGD V+ DN F D + E + +VE
Sbjct: 112 LSVLVTGAAGFVGSHCSLALRKRGDGVLGFDN-FNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 175 -----PILLEV-D-----QIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 222
P+L ++ D I HLA A V Y NP I +N+ G +N+L +AK
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAG-VRYAMKNPQSYIASNIAGFVNLLEVAKAANP 229
Query: 223 R--FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
+ + S+S VYG ++P +E + + P S Y K+ E + Y+ G+
Sbjct: 230 QPAIVWASSSSVYGLNTENPFSEEHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSL 285
Query: 281 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG--DGKQT-RSFQFVSDLVEGLI 337
R F YGP D F L + + +Y D ++ R F ++ D+V+G +
Sbjct: 286 TGLRFFTVYGPWGRPDMAYFF--FTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCV 343
Query: 338 RLME 341
++
Sbjct: 344 GALD 347
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 58/249 (23%), Positives = 102/249 (40%)
Query: 183 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 239
I HLA A V Y NP I +N+ G +N+L +AK + + S+S VYG ++
Sbjct: 190 ILHLAAQAG-VRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTEN 248
Query: 240 PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR 299
P +E + + P S Y K+ E + Y+ G+ R F YGP D
Sbjct: 249 PFSEEHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 304
Query: 300 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME---------GDHVGP-- 347
+ + + + + R F ++ D+V+G + ++ G G
Sbjct: 305 FFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQ 364
Query: 348 ---FNLGNPGEFTMLELAEVVQEIIDRNARIEF--RPNTEDDPHKRKPDITKAKQLLGWE 402
+NLGN + L +++ ++ A+ P D P+ +++ A + G++
Sbjct: 365 LRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHA-NVSLAYKDFGYK 423
Query: 403 PRVTLRKGL 411
P L GL
Sbjct: 424 PTTDLAAGL 432
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 69/240 (28%), Positives = 109/240 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN---YFTGKKDNLIHHFGNPR-FELIRHD 171
+ +LVTG GFVGSH+ L RGD V+ +DN Y+ + R ++ D
Sbjct: 88 ISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGD 147
Query: 172 VVEPILL----EV---DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR 223
+ + LL +V + HLA A V Y NP + +N+ G +N+L + K +
Sbjct: 148 LNDAKLLAKLFDVVAFTHVMHLAAQAG-VRYALENPQSYVHSNIAGLVNLLEICKAANPQ 206
Query: 224 --FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
+ S+S VYG + P +E+ + P S Y K+ E +T Y+ G+
Sbjct: 207 PAIVWASSSSVYGLNEKVPFSESDRTD-QPA---SLYAATKKAGEEITHTYNHIYGLAIT 262
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ----TRSFQFVSDLVEGLI 337
R F YGP D +F L+ +P+T+Y GK R F ++ D+V+G +
Sbjct: 263 GLRFFTVYGPWGRPD--MAYFSFTRNILQGKPITIYR-GKNRVDLARDFTYIDDIVKGCL 319
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 65/255 (25%), Positives = 106/255 (41%)
Query: 183 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 239
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 166 VMHLAAQAG-VRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKV 224
Query: 240 PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR 299
P +E+ + P S Y K+ E +T Y+ G+ R F YGP D
Sbjct: 225 PFSESDRTD-QPA---SLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAY 280
Query: 300 V-VSNFVAQALRKEPLTVYGDGKQ--TRSFQFVSDLVEGLIRLME--GDHVG-------- 346
+ + Q K G + R F ++ D+V+G + ++ G G
Sbjct: 281 FSFTRNILQG--KPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGA 338
Query: 347 -P---FNLGNPGEFTMLELAEVVQEIIDRNARIEF--RPNTEDDPHKRKPDITKAKQLLG 400
P FNLGN T+ L +++++ + A+ F P D P +I+ A+ G
Sbjct: 339 APYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGDVPFTHA-NISSARNEFG 397
Query: 401 WEPRVTLRKGLPLMV 415
++P L GL V
Sbjct: 398 YKPTTDLETGLKKFV 412
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 182 (69.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 88/346 (25%), Positives = 147/346 (42%)
Query: 18 QIIGLDSSPRPSKSVKSFRNPVQYVLRSQRLIF---LFIGIAISSLIFSKLPVRQHQIAN 74
Q+ LD P K + + ++ +L F +F+G+ + F + PV +N
Sbjct: 3 QMSHLDDIPSTPGKFKPYFHRTRWQSSVAKLAFWSLVFVGLIF--IFFYRSPVS----SN 56
Query: 75 PA-PLTTSETTHLSRRRVLYEAAEVQHVNAGGKVPLGLQRKSLRILVTGGAGFVGSHLVD 133
PA P S T+ S +E + V + ++ R+ +LVTG AGFVG+H+
Sbjct: 57 PADPSRRSLRTY-SWGGPAWE----KRVRSSARLRT---RRGFSVLVTGAAGFVGTHVSA 108
Query: 134 RLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFE-----LIRHDVVEPILL----EV---D 181
L RGD V+ +DN F D + E ++ D+ + LL EV
Sbjct: 109 ALKRRGDGVLGLDN-FNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFT 167
Query: 182 QIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQ 238
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 168 HVMHLAAQAG-VRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTK 226
Query: 239 HPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDG 298
P +E + P S Y K+ E + Y+ G+ R F YGP D
Sbjct: 227 VPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMA 282
Query: 299 RVVSNFVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEGLIRLME 341
F L+ + ++++ G R F ++ D+V+G + ++
Sbjct: 283 YFF--FTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALD 326
Score = 126 (49.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 57/248 (22%), Positives = 100/248 (40%)
Query: 183 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 239
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 169 VMHLAAQAG-VRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKV 227
Query: 240 PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR 299
P +E + P S Y K+ E + Y+ G+ R F YGP D
Sbjct: 228 PFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 283
Query: 300 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME---------GDHVGP-- 347
+ + + G R F ++ D+V+G + ++ G G
Sbjct: 284 FFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQ 343
Query: 348 ---FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTED-DPHKRKPDITKAKQLLGWEP 403
FNLGN + +L +++ ++ A+ + D +I+ A++ LG++P
Sbjct: 344 LRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKP 403
Query: 404 RVTLRKGL 411
L+ GL
Sbjct: 404 TTDLQTGL 411
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 180 (68.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 68/256 (26%), Positives = 106/256 (41%)
Query: 181 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----------KRVGARFLLTSTS 230
D + HLA + P I+TN+VGT +L A K+ RF ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTD 134
Query: 231 EVYGDPLQHPQAET------YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
EVYGD L HP + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTN 193
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGD 343
N YGP + +++ + AL + L +YG G Q R + +V D L ++ EG
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGK 251
Query: 344 HVGPFNLGNPGEF----TMLELAEVVQEIIDRNARI-EFRPNTEDDP-HKRKP--DITKA 395
+N+G E +L + +++ EI+ + E D P H R+ D K
Sbjct: 252 AGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKI 311
Query: 396 KQLLGWEPRVTLRKGL 411
+ LGW+P+ T G+
Sbjct: 312 GRALGWKPQETFESGI 327
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNY-FTGKKDNLIHHFGNPRFELIRHDVV 173
++ILVTGGAGF+GS +V +++ DSV+ VD + G +++L + R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADIC 60
Query: 174 E-PILLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 218
+ P + + D + HLA + P I+TN+VGT +L A+
Sbjct: 61 DAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 177 (67.4 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 82/299 (27%), Positives = 125/299 (41%)
Query: 115 SLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPR--FELIRHDV 172
S+RILVTGG+G VG + +++ G + D F KD + R FE +R
Sbjct: 7 SVRILVTGGSGLVG-RAIQKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALFEKVR--- 62
Query: 173 VEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS 230
P + HLA + + K+N + + NV N+L A VG R +++ S
Sbjct: 63 --PT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGVRKVVSCLS 114
Query: 231 E-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTY 289
++ D +P ET N P Y KR + Y + G N +
Sbjct: 115 TCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVF 174
Query: 290 GPR--MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVEGLIRLM-EG 342
GP I+DG V+ + + L K LTV+G GK R F + DL I ++ E
Sbjct: 175 GPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVLREY 234
Query: 343 DHVGPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLL 399
+ V P ++G E ++ E AE V E +D + + F D K+ K + L
Sbjct: 235 NEVEPIILSVGEEDEVSIQEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNGKLRTYL 293
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 162 (62.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 59/188 (31%), Positives = 86/188 (45%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTG------KKDNLIHHFGNP----RFEL 167
+LVTGGAG++GSH V +L++ G S +VVDNY + L GN + +L
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 168 IRHDVVEPILLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 225
+E I E D + H A + P+ N+VGT+ +L + + G + L
Sbjct: 65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124
Query: 226 LTSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA- 283
+ S+S VYG P + P E +PI + Y K E + D HR E +I
Sbjct: 125 VFSSSATVYGWPKEVPCTEE-----SPISATNPYGRTKLFIEEICRDVHRS-DSEWKIIL 178
Query: 284 -RIFNTYG 290
R FN G
Sbjct: 179 LRYFNPVG 186
Score = 57 (25.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 27/114 (23%), Positives = 48/114 (42%)
Query: 304 FVAQ-ALRKEP-LTVYG------DGKQTRSFQFVSDLVEGLI---RLMEGDHVG--PFNL 350
+V Q A+ + P LTV+G DG R + V DL +G I R ++ + +NL
Sbjct: 207 YVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNL 266
Query: 351 GNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPR 404
G ++LE+ ++ + + D KA++ L W+ +
Sbjct: 267 GTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAK 320
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 180 (68.4 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 69/246 (28%), Positives = 112/246 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN---YFTGK----KDNLIHHFGNPRFELI 168
L +LVTG +GFVG+H+ L RGD V+ +DN Y+ K + L+ G F ++
Sbjct: 96 LTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGV--F-VV 152
Query: 169 RHDVVEPILLE--VD-----QIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRV 220
D+ + +LL D + HLA A V Y NP + +N+ G +N+L ++K
Sbjct: 153 EGDINDAVLLRKLFDVVLFTHVMHLAAQAG-VRYAMQNPGSYVNSNIAGFVNLLEVSKSA 211
Query: 221 GAR--FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGI 278
+ + S+S VYG + P +E + P S Y K+ E + Y+ G+
Sbjct: 212 NPQPAIVWASSSSVYGLNSKVPFSEKDRTD-QPA---SLYAATKKAGEGIAHTYNHIYGL 267
Query: 279 EARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD---GKQTRSFQFVSDLVEG 335
R F YGP D F L+ + +TV+ G R F ++ D+V+G
Sbjct: 268 SLTGLRFFTVYGPWGRPDMAYFF--FTKDILKGKTITVFESPDKGSVARDFTYIDDIVKG 325
Query: 336 LIRLME 341
+ ++
Sbjct: 326 CLGALD 331
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 183 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 239
+ HLA A V Y NP + +N+ G +N+L ++K + + S+S VYG +
Sbjct: 174 VMHLAAQAG-VRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKV 232
Query: 240 PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR 299
P +E + P S Y K+ E + Y+ G+ R F YGP D
Sbjct: 233 PFSEKDRTD-QPA---SLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 288
Query: 300 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME---------GDHVGP-- 347
+ + + G R F ++ D+V+G + ++ G GP
Sbjct: 289 FFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAM 348
Query: 348 ---FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTED-DPHKRKPDITKAKQLLGWEP 403
+NLGN + +L ++++++ A+ + P + D +IT A+ LG++P
Sbjct: 349 FRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKP 408
Query: 404 RVTLRKGLPLMVADFRHRIFGDQKEA 429
V L GL V + G +K++
Sbjct: 409 AVDLETGLKKFVKWYMGFYTGSKKKS 434
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 177 (67.4 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 65/252 (25%), Positives = 115/252 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHDVV 173
+R+LVTGG+G++GSH +L+ G V+++DN K+ L I + + D+
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQPTFVEGDIR 60
Query: 174 -EPILLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 225
E ++ E+ + + H A + P++ NV GTL ++ + + F+
Sbjct: 61 NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 226 LTSTSEVYGDPLQHPQAETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGLGIEARIA- 283
+S++ VYGD + P E++ P G +S Y + K E + D + E IA
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQP-EWSIAL 174
Query: 284 -RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLV 333
R FN G D G + +N ++AQ R++ L ++G+ V D +
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYI 234
Query: 334 EGLIRLMEGDHV 345
++ L +G HV
Sbjct: 235 H-VMDLADG-HV 244
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 172 (65.6 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 77/274 (28%), Positives = 120/274 (43%)
Query: 109 LGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
+G + S+RILVTGG+G VG + +++ G + D F KD + R L
Sbjct: 1 MGEPQGSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTR-ALF 58
Query: 169 RHDVVEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 --EKVQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVV 110
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIP 170
Query: 286 FNTYGPR--MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVEGLIRL 339
N +GP I+DG V+ + + L K LTV+G G R F + DL + I +
Sbjct: 171 TNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV 230
Query: 340 M-EGDHVGPF--NLGNPGEFTMLELAEVVQEIID 370
+ E + V P ++G E ++ E AE V E +D
Sbjct: 231 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMD 264
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 162 (62.1 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 64/241 (26%), Positives = 105/241 (43%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV 173
K+ R V GG GF+G H+V++L+ RG +V V D + F NPR + D+
Sbjct: 19 KAKRCTVIGGCGFLGQHMVEQLLARGYAVNVFD---------IRQGFDNPRVQFFLGDLC 69
Query: 174 E-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 227
P L V ++H C ASP + N + N +GT N++ K G + +LT
Sbjct: 70 SQQDLYPALKGVSTVFH--C-ASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILT 126
Query: 228 STSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-LGIEARIAR 284
S++ V G +++ + + PI Y E K E + H R
Sbjct: 127 SSASVIFEGVDIKNGTEDLPYAT-KPIDY---YTETKILQERAVLGAHDPEKNFLTTAIR 182
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH 344
+GPR D ++V + A + + + G+GK F FV ++V G ++ +H
Sbjct: 183 PHGIFGPR----DPQLVPILIEAAKKGKMKFMIGNGKNLVDFTFVENVVHG--HILAAEH 236
Query: 345 V 345
+
Sbjct: 237 L 237
Score = 56 (24.8 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
KAK+L+G+ P VT+ + V F H
Sbjct: 325 KAKKLMGYRPLVTMDDAVDKTVRSFHH 351
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 80/303 (26%), Positives = 128/303 (42%)
Query: 109 LGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
+G S+RILVTGG+G VG + +++ G + + F KD + + L
Sbjct: 1 MGEPHGSMRILVTGGSGLVG-RAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQ-ALF 58
Query: 169 RHDVVEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ V+P + HLA + + K+N + + NV N+L A VG R ++
Sbjct: 59 QK--VQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGTRKVV 110
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIP 170
Query: 286 FNTYGP--RMCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVEGLIRL 339
N +GP I+DG V+ + + L K LTV+G GK R F + DL I +
Sbjct: 171 TNVFGPYDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWV 230
Query: 340 M-EGDHVGPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAK 396
+ E + V P ++G E ++ E AE V E +D + + F D +K+ K +
Sbjct: 231 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFSGEVTFDSTKSDGQYKKTASNGKLR 290
Query: 397 QLL 399
L
Sbjct: 291 SYL 293
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 73/285 (25%), Positives = 124/285 (43%)
Query: 76 APLTTSETTHLSRRRVLYEA-AEVQHVNAGGKVPLGLQRKSLRILVTGGAGFVGSHLVDR 134
+P++ +++ S R + A + V + +V R + +LVTG AGFVG+H+
Sbjct: 54 SPISNPDSSRRSLRTYSWGGPAWEKRVRSSARVRT---RNGVSVLVTGAAGFVGTHVSAA 110
Query: 135 LMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFE-----LIRHDVVEPILL----EV---DQ 182
L RGD V+ +DN F D + E ++ D+ + LL EV
Sbjct: 111 LKRRGDGVLGLDN-FNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTH 169
Query: 183 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 239
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 170 VMHLAAQAG-VRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKV 228
Query: 240 PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR 299
P +E + P S Y K+ E + Y+ G+ R F YGP D
Sbjct: 229 PFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 284
Query: 300 VVSNFVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEGLIRLME 341
F L+ + ++++ G R F ++ D+V+G + ++
Sbjct: 285 FF--FTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALD 327
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 59/253 (23%), Positives = 101/253 (39%)
Query: 183 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 239
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 170 VMHLAAQAG-VRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKV 228
Query: 240 PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR 299
P +E + P S Y K+ E + Y+ G+ R F YGP D
Sbjct: 229 PFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 284
Query: 300 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME---------GDHVGP-- 347
+ + + G R F ++ D+V+G + ++ G G
Sbjct: 285 FFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQ 344
Query: 348 ---FNLGNPGEFTMLELAEVVQEIIDRNARIEFR--PNTEDDPHKRKPDITKAKQLLGWE 402
FNLGN + +L +++ ++ A+ P D P +I+ A++ G++
Sbjct: 345 LRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHA-NISSAQREFGYK 403
Query: 403 PRVTLRKGLPLMV 415
P L+ GL V
Sbjct: 404 PSTDLQTGLKKFV 416
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 161 (61.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 65/243 (26%), Positives = 113/243 (46%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHH-FGNPRFELIRHDV 172
K+ + V GG+GF+G H+V++L++RG +V V D IH F NPR + D+
Sbjct: 25 KAKKCTVIGGSGFLGQHMVEQLLERGYTVNVFD----------IHQGFDNPRVQFFIGDL 74
Query: 173 VE-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 226
P L V ++H C ASP Y N + N +GT ++ + G + +L
Sbjct: 75 CNQQDLYPALKGVSTVFH--C-ASPPPYSNNKELFYRVNFIGTKTVIETCREAGVQKLIL 131
Query: 227 TSTSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYH--RGLGIEARI 282
TS++ V G +++ + + + PI Y E K E +D + + + A I
Sbjct: 132 TSSASVVFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKKNFLTAAI 187
Query: 283 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEG 342
R +GPR D ++V + A + + + G+G+ F FV ++V G ++
Sbjct: 188 -RPHGIFGPR----DPQLVPILIDAARKGKMKFMIGNGENLVDFTFVENVVHG--HILAA 240
Query: 343 DHV 345
+H+
Sbjct: 241 EHL 243
Score = 56 (24.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
KAK+L G+ P VT+ + + V F H
Sbjct: 331 KAKKLFGYRPLVTMDEAVERTVQSFHH 357
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 157 (60.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 63/237 (26%), Positives = 104/237 (43%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV 173
K + V GG+GF+G H+V++L++RG +V V D K+ F NPR + D+
Sbjct: 24 KDRKCTVIGGSGFLGQHMVEQLLERGYAVNVFD-----KRQG----FDNPRVQFFLGDLC 74
Query: 174 E-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 227
P L V ++H A PA + N + N +GT N++ + G + +LT
Sbjct: 75 NQQDLYPALKGVSTVFHCASPAPSSN---NKELFYRVNYIGTKNVIETCREAGVQKLILT 131
Query: 228 STSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR-GLGIEARIAR 284
S++ V G +++ + + + PI Y E K E + + R
Sbjct: 132 SSASVIFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQEKTVLGANDPDKNFLTTAIR 187
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
+GPR D ++V + A + + V G+GK F FV ++V G I E
Sbjct: 188 PHGIFGPR----DPQLVPILIEAARKGKMKFVIGNGKNLVDFTFVENVVHGHILAAE 240
Score = 60 (26.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
KAK+LLG++P VT+ + V F H
Sbjct: 330 KAKKLLGYQPLVTMDDAVERTVQSFHH 356
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 147 (56.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 56/186 (30%), Positives = 80/186 (43%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKD--NLIHH-FGNP-RFELIRHDV- 172
+LVTGGAG++GSH RL+ V +VDN G ++ F P R + I D+
Sbjct: 73 VLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLG 132
Query: 173 ----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
V I E D + H A A P+K TL +L G + L+
Sbjct: 133 DAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLI 192
Query: 227 -TSTSEVYGDPLQHP-QAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ST YG+P P ET +NP Y + K+ AE + +D+ + + I R
Sbjct: 193 YSSTCATYGEPDIMPITEETPQVPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
Query: 285 IFNTYG 290
FN G
Sbjct: 247 YFNVIG 252
Score = 73 (30.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 23/97 (23%), Positives = 46/97 (47%)
Query: 319 DGKQTRSFQFVSDLVEGLIRLMEGDH---VGPFNLGNPGEFTMLELAEVVQEIIDRNARI 375
DG R + V+DLV+ ++ ++ VG +N+G ++ E E ++ +I
Sbjct: 299 DGTCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKI 358
Query: 376 EFRPNTEDDPHKRKPDITKAKQLLGWEPRVT-LRKGL 411
++ P D + D +K ++ L W + T L++ L
Sbjct: 359 DYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESL 395
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 71/251 (28%), Positives = 114/251 (45%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHDVVE 174
RI+VTGGAG++GSH V L++ G + ++VDN + + + E D++
Sbjct: 7 RIMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKEIEFHHVDIMN 66
Query: 175 PILLEVDQIYHLACPASPVHY-------KFN--PVKTIKTNVVGTLNMLGLA-KRVGARF 224
L D+I+ S +H+ + N P+K N+ GTL +L L K +
Sbjct: 67 EKAL--DEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKL 124
Query: 225 LLTSTSEVYGDPLQHPQAETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA 283
+ +S++ VYGDP P E + NP G Y EG + L I +
Sbjct: 125 VFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEG--ILQDLCASDPEWNCI---ML 179
Query: 284 RIFNTYG--PRMCI-DDGRVVSN----FVAQ-ALRKEP-LTVYGDGKQTRSFQFVSDLVE 334
R FN G P I +D + + N +V Q A+ K P L+++G+ T V D +
Sbjct: 180 RYFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIH 239
Query: 335 GLIRLMEGDHV 345
++ L +G H+
Sbjct: 240 -VVDLAKG-HI 248
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 150 (57.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 54/185 (29%), Positives = 86/185 (46%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGN-PRFELIRHDVV--- 173
+LVTGGAG++GSH L+++G V++VDN + + +H ++I H V
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVE-AVHRIEKLTGKKVIFHQVDLLD 67
Query: 174 EPILLEV--DQ----IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 226
EP L +V +Q + H A + P+ K N+ GT+N++ K+ R F+
Sbjct: 68 EPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFVF 127
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR-GLGIEARIARI 285
+S++ VYGDP + P P S Y K E + D + + A + R
Sbjct: 128 SSSATVYGDPTR-PGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAALLRY 186
Query: 286 FNTYG 290
FN G
Sbjct: 187 FNPGG 191
Score = 66 (28.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 26/112 (23%), Positives = 47/112 (41%)
Query: 304 FVAQAL--RKEPLTVYGD------GKQTRSFQFVSDLVEGLIRLME--GDHV---GPFNL 350
++AQ R + L V+GD G R + V DL E + ++ H P+NL
Sbjct: 212 YIAQVAVGRLDHLNVFGDDYPTSDGTPIRDYIHVCDLAEAHVAALDYLRQHFVSCRPWNL 271
Query: 351 GNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWE 402
G+ T+ ++ + + R+ + P D + T+A + L W+
Sbjct: 272 GSGTGSTVFQVLNAFSKAVGRDLPYKVTPRRAGDVVNLTANPTRANEELKWK 323
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 169 (64.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 86/328 (26%), Positives = 137/328 (41%)
Query: 104 GGKVPLGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNP 163
G +V + KS +I V G G VGS +V +L ++G FT NL+ +
Sbjct: 6 GSEVS-SMSDKSAKIFVAGHRGLVGSAIVRKLQEQG---------FT----NLVLKT-HA 50
Query: 164 RFELIRHDVVEPILLEVDQIYHL--ACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRV 220
+L R VE + +Y + A +H P I N+ N++ A
Sbjct: 51 ELDLTRQADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEH 110
Query: 221 GARFLL-TSTSEVYGD--PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG 277
G + LL +S +Y P P++ ++ P Y K Y G
Sbjct: 111 GVKKLLFLGSSCIYPKFAPQPIPESALLTASLEP--TNEWYAIAKIAGIKTCQAYRIQHG 168
Query: 278 IEARIARIFNTYGPRMCIDDGRVVSNFVAQALRK----------EPLTVYGDGKQTRSFQ 327
+A N YGP D+ ++ V AL + E + V+G G R F
Sbjct: 169 WDAISGMPTNLYGPN---DNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFL 225
Query: 328 FVSDLVEGLIRLME---G-DHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTED 383
V DL + + L++ G +HV N+G+ E T+ ELAE+V+E++ ++ + D
Sbjct: 226 HVDDLADACVFLLDRYSGLEHV---NIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPD 282
Query: 384 DPHKRKPDITKAKQLLGWEPRVTLRKGL 411
++ D +K L GW P+V+LR GL
Sbjct: 283 GTPRKLMDSSKLASL-GWTPKVSLRDGL 309
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 142 (55.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 59/196 (30%), Positives = 86/196 (43%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL-------IHHFGNPRF---EL 167
+LV+GGAG++GSH V +L+ G SV+VVDN +L H F +L
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 168 IRHDVVEPILLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 225
+E I E D + H A + P+ N+VGT+ +L + + G + L
Sbjct: 66 RDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNL 125
Query: 226 LTSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA- 283
+ S+S VYG P + P E + PI + Y K E + D + G E +I
Sbjct: 126 VFSSSATVYGSPKEVPCTEEF-----PISALNPYGRTKLFIEEICRDVY-GSDPEWKIIL 179
Query: 284 -RIFNTYGPRMCIDDG 298
R FN G D G
Sbjct: 180 LRYFNPVGAHPSGDIG 195
Score = 68 (29.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/114 (25%), Positives = 49/114 (42%)
Query: 304 FVAQ-ALRKEP-LTVYG------DGKQTRSFQFVSDLVEGLI---RLMEGDHVG--PFNL 350
FV Q A+ + P LTV+G DG R + V DL +G I R +E +G +NL
Sbjct: 208 FVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVIDLADGHIAALRKLEDCKIGCEVYNL 267
Query: 351 GNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPR 404
G ++LE+ + ++ + + D +A+ L W+ +
Sbjct: 268 GTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAK 321
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 82/321 (25%), Positives = 137/321 (42%)
Query: 113 RKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDV 172
+K I VTG G GS ++ RL +G S ++ T ++ +L + FE ++
Sbjct: 2 QKDAPIFVTGHRGLAGSAILRRLKKQGYSSLITR---THQELDLTNK--EKVFEFFANNC 56
Query: 173 VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 231
E + L ++ + S +H PV I+ N+ N++ + R R L +S
Sbjct: 57 PEYVFLAAARVGGIN--DSNLH----PVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSSC 110
Query: 232 VYGDPLQHPQAETYW--GNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTY 289
+Y + P E Y+ G + P Y K Y+R + A N +
Sbjct: 111 IYSNDAPRPLKEIYFNSGKLEP--TNRAYSTAKIAGIEHCWAYNRQYKTQYLCAMPTNLF 168
Query: 290 GPR--MCIDDGRVVSNFVA---QAL-RKEP-LTVYGDGKQTRSFQFVSDLVEGLIRLME- 341
GP +++G VV++ ++ QA +K+P ++G GK R F + DL E LM
Sbjct: 169 GPNDNYDLENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLAEACCHLMNL 228
Query: 342 ---------G-DHVGPF-NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKP 390
G D P N+G+ E ++ ELA ++Q+II I + + D +
Sbjct: 229 PDDIVKSVFGQDDQPPIVNIGSGKEISIYELALLIQDIIGYQGDIIWDHSKPDGALTKVM 288
Query: 391 DITKAKQLLGWEPRVTLRKGL 411
D++ Q LGW R L G+
Sbjct: 289 DVS-LMQYLGWSAREGLVSGI 308
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 83/329 (25%), Positives = 136/329 (41%)
Query: 102 NAGGKVPLG--LQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHH 159
N G ++ G + KS +I V G G VGS +V +L D+G FT NL+
Sbjct: 4 NTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQG---------FT----NLVLR 50
Query: 160 FGNPRFELIRHDVVEPILLEVDQIYHL--ACPASPVHYKFN-PVKTIKTNVVGTLNMLGL 216
+ +L VE +Y + A +H P I N+ N++
Sbjct: 51 T-HSELDLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHS 109
Query: 217 AKRVGARFLL-TSTSEVYGD--PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 273
A G + LL +S +Y P P++ G + P Y K + Y
Sbjct: 110 AYTHGVKKLLFLGSSCIYPKFAPQPIPESALLTGPLEP--TNEWYAIAKIAGIKMCQAYR 167
Query: 274 RGLGIEARIARIFNTYGPRMCI--DDGRVVSNFV-----AQALRKEPLTVYGDGKQTRSF 326
+A N YG ++ V+ + A+A + + V+G G R F
Sbjct: 168 LQHQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREF 227
Query: 327 QFVSDLVEGLIRLME---G-DHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTE 382
V DL + + LM+ G +HV N+G+ E T+ ELAE+V+E++ ++ +
Sbjct: 228 LHVDDLADACVFLMDQYSGFEHV---NVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKP 284
Query: 383 DDPHKRKPDITKAKQLLGWEPRVTLRKGL 411
D ++ D +K L GW P+++L+ GL
Sbjct: 285 DGTPRKLMDSSKLASL-GWTPKISLKDGL 312
>TAIR|locus:2827733 [details] [associations]
symbol:AT2G28755 "AT2G28755" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AC005727 GO:GO:0016829 IPI:IPI00528391
RefSeq:NP_180442.1 UniGene:At.52956 ProteinModelPortal:Q8S8L8
SMR:Q8S8L8 EnsemblPlants:AT2G28755.1 GeneID:817425
KEGG:ath:AT2G28755 TAIR:At2g28755 Genevestigator:Q8S8L8
Uniprot:Q8S8L8
Length = 56
Score = 146 (56.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 333 VEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHK 387
+EGL RLM GD GP N+GNPGEF+++ELAE V+ +I + I+ N DDP +
Sbjct: 1 MEGLKRLMAGDKSGPINIGNPGEFSIVELAETVKALIKPDVEIKIVENIPDDPRQ 55
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 151 (58.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 68/241 (28%), Positives = 107/241 (44%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNP--RF---E 166
Q ++ R V GG+GF+G H+V++L+ RG +V V D + F NP RF +
Sbjct: 34 QNQAKRCTVIGGSGFLGQHMVEQLLARGYAVNVFD---------IQQGFDNPQVRFFLGD 84
Query: 167 LIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 225
L + P L V+ ++H C ASP N + N +GT N++ K G + +
Sbjct: 85 LCSRQDLYPALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
Query: 226 LTSTSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTM---DYHRGLGIEA 280
LTS++ V G +++ + + + PI Y E K E + D + A
Sbjct: 142 LTSSASVIFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLGANDPEKNFLTTA 197
Query: 281 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
R +GPR D ++V + A + V G+GK F FV ++V G I
Sbjct: 198 --IRPHGIFGPR----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAA 251
Query: 341 E 341
E
Sbjct: 252 E 252
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
+AK+ +G++P VT+ + V FRH
Sbjct: 342 RAKKAMGYQPLVTMDDAMERTVQSFRH 368
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 151 (58.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 78/279 (27%), Positives = 124/279 (44%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDN----YFTGKKDNLIH--HFGNPRFELIRHDV 172
L+TG G GS+L + L+++G V + + T + D+L H + F+L D+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 173 VEP-----ILLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--- 221
+ IL EV D++Y+L S V F +P T + +GTL +L + +G
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQ-SHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTK 125
Query: 222 -ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
+F STSE+YG + PQ ET P RS Y K A +T++Y GI A
Sbjct: 126 KTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAYWITINYRESYGIYA 180
Query: 281 RIARIFNTYGPR-----MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 335
+FN PR + R ++N +AQ L K G+ R + D V+
Sbjct: 181 CNGILFNHESPRRGETFVTRKITRGMAN-IAQGLEK--CLFMGNLDALRDWGHAKDYVKM 237
Query: 336 LIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNAR 374
+++ D F + +++ V+E ID +AR
Sbjct: 238 QWMMLQQDEPRDFVIATGVQYS-------VREFIDMSAR 269
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVA 416
D + AK+ LGW P +TL++ + MVA
Sbjct: 324 DPSLAKKELGWVPEITLQQMVSEMVA 349
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 151 (58.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 78/279 (27%), Positives = 124/279 (44%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDN----YFTGKKDNLIH--HFGNPRFELIRHDV 172
L+TG G GS+L + L+++G V + + T + D+L H + F+L D+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 173 VEP-----ILLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--- 221
+ IL EV D++Y+L S V F +P T + +GTL +L + +G
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQ-SHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTK 125
Query: 222 -ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
+F STSE+YG + PQ ET P RS Y K A +T++Y GI A
Sbjct: 126 KTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAYWITINYRESYGIYA 180
Query: 281 RIARIFNTYGPR-----MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 335
+FN PR + R ++N +AQ L K G+ R + D V+
Sbjct: 181 CNGILFNHESPRRGETFVTRKITRGMAN-IAQGLEK--CLFMGNLDALRDWGHAKDYVKM 237
Query: 336 LIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNAR 374
+++ D F + +++ V+E ID +AR
Sbjct: 238 QWMMLQQDEPRDFVIATGVQYS-------VREFIDMSAR 269
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVA 416
D + AK+ LGW P +TL++ + MVA
Sbjct: 324 DPSLAKKELGWVPEITLQQMVSEMVA 349
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 164 (62.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 63/250 (25%), Positives = 113/250 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHDVV 173
+++LVTGG G++GSH +++ G + +++DN + K L I R + ++ D+
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQFVQGDIR 60
Query: 174 EPILL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ LL ++ + H A + P++ NV GTL ++ + G + L+
Sbjct: 61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLV 120
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGL-GIEARIAR 284
S+S VYG+P P E++ P + Y K E D+ + + R
Sbjct: 121 FSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSITLLR 175
Query: 285 IFNTYG--PRMCI-DDGRVVSN----FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLVEG 335
FN G P + +D + + N FV Q R+E L+V+G T+ V D +
Sbjct: 176 YFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIH- 234
Query: 336 LIRLMEGDHV 345
++ L +G H+
Sbjct: 235 VMDLADG-HI 243
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 59/224 (26%), Positives = 96/224 (42%)
Query: 199 PVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYGDPLQHPQAETYWGNV-NPIGVRS 256
P++ NV GTL ++ + G + L+ S+S VYG+P P E++ NP G RS
Sbjct: 93 PLEYYDNNVNGTLVLVAAMREAGVKSLVFSSSATVYGEPTSVPITESFPTKAANPYG-RS 151
Query: 257 --CYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSN----FVAQAL- 309
+E + D+ L R ++ +D + + N FV Q
Sbjct: 152 KLMVEECLTDFQKANPDWSITL---LRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAV 208
Query: 310 -RKEPLTVYG------DGKQTRSFQFVSDLVEGLIRLME--GDHVGP--FNLGNPGEFTM 358
R+E L+V+G DG R + V DL +G I ++ G G +NLG +++
Sbjct: 209 GRREYLSVFGSDYPTKDGTGVRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGTGKGYSV 268
Query: 359 LELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWE 402
L++ + + R + D + D TKA Q LGW+
Sbjct: 269 LDVVKAFETASGRTVPYKLVDRRPGDIAEYWADPTKAAQDLGWK 312
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 164 (62.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 63/250 (25%), Positives = 113/250 (45%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHDVV 173
+++LVTGG G++GSH +++ G + +++DN + K L I R + ++ D+
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQFVQGDIR 60
Query: 174 EPILL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ LL ++ + H A + P++ NV GTL ++ + G + L+
Sbjct: 61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLV 120
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGL-GIEARIAR 284
S+S VYG+P P E++ P + Y K E D+ + + R
Sbjct: 121 FSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSITLLR 175
Query: 285 IFNTYG--PRMCI-DDGRVVSN----FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLVEG 335
FN G P + +D + + N FV Q R+E L+V+G T+ V D +
Sbjct: 176 YFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIH- 234
Query: 336 LIRLMEGDHV 345
++ L +G H+
Sbjct: 235 VMDLADG-HI 243
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 59/224 (26%), Positives = 96/224 (42%)
Query: 199 PVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYGDPLQHPQAETYWGNV-NPIGVRS 256
P++ NV GTL ++ + G + L+ S+S VYG+P P E++ NP G RS
Sbjct: 93 PLEYYDNNVNGTLVLVAAMREAGVKSLVFSSSATVYGEPTSVPITESFPTKAANPYG-RS 151
Query: 257 --CYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSN----FVAQAL- 309
+E + D+ L R ++ +D + + N FV Q
Sbjct: 152 KLMVEECLTDFQKANPDWSITL---LRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAV 208
Query: 310 -RKEPLTVYG------DGKQTRSFQFVSDLVEGLIRLME--GDHVGP--FNLGNPGEFTM 358
R+E L+V+G DG R + V DL +G I ++ G G +NLG +++
Sbjct: 209 GRREYLSVFGSDYPTKDGTGVRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGTGKGYSV 268
Query: 359 LELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWE 402
L++ + + R + D + D TKA Q LGW+
Sbjct: 269 LDVVKAFETASGRTVPYKLVDRRPGDIAEYWADPTKAAQDLGWK 312
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 137 (53.3 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 70/277 (25%), Positives = 119/277 (42%)
Query: 120 VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIH--HFGNPRFELIRHDVVEP- 175
VTG G ++ L+++ + ++ T + D++ H NP+F L D+ +
Sbjct: 10 VTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTS 69
Query: 176 ----ILLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG----ARF 224
IL EV D++Y+L S V F +P T + +GTL +L + +G RF
Sbjct: 70 NLTRILREVQPDEVYNLGA-MSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 128
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
STSE+YG + PQ ET P RS Y K A +T++Y G+ A
Sbjct: 129 YQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGI 183
Query: 285 IFNTYGPR-----MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRL 339
+FN PR + R ++N +AQ L E G+ R + D V+ +
Sbjct: 184 LFNHESPRRGETFVTRKITRAIAN-IAQGL--ESCLYLGNMDSLRDWGHAKDYVKMQWMM 240
Query: 340 MEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIE 376
++ + F + ++++ + E+ + R E
Sbjct: 241 LQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFE 277
Score = 71 (30.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVAD 417
D TKA + LGW+P +TLR+ + MVA+
Sbjct: 323 DPTKAHEKLGWKPEITLREMVSEMVAN 349
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 149 (57.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 63/242 (26%), Positives = 109/242 (45%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV 173
K+ + V GG+GF+G H+V++L+ RG +V V D + F NPR + D+
Sbjct: 25 KAKKCTVIGGSGFLGQHMVEQLLSRGYAVNVFD---------VRQGFDNPRVQFFIGDLC 75
Query: 174 E-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 227
P L V ++H A P S + N + N GT ++ K G + +LT
Sbjct: 76 NQQDLYPALKGVSTVFHCASPPSNSN---NKELFYRVNSTGTKTVIETCKEAGVQKLILT 132
Query: 228 STSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYH--RGLGIEARIA 283
S++ V G +++ + + + PI Y E K E +D + + + A I
Sbjct: 133 SSASVVFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKKNFLTAAI- 187
Query: 284 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGD 343
R +GPR D ++V + A + + + G+GK F FV ++V G ++ +
Sbjct: 188 RPHGIFGPR----DPQLVPVLIDAARKGKMKFMIGNGKNLVDFTFVENVVHG--HILAAE 241
Query: 344 HV 345
H+
Sbjct: 242 HL 243
Score = 57 (25.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 24/94 (25%), Positives = 40/94 (42%)
Query: 328 FVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIID-RNARIEFRPNTEDDPH 386
F+S ++ GL H+ P+ + F + L V+ +I + FR H
Sbjct: 267 FLSRILTGLNYEAPKYHI-PYRVAYYLAFLLSLLVMVLSPLIQIQTTFTPFRVALAGTFH 325
Query: 387 KRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRH 420
+ KAK+L+G+ P VT+ + V F H
Sbjct: 326 YYSCE--KAKKLIGYRPLVTMDDAVERTVQSFHH 357
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 114 (45.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 52/190 (27%), Positives = 88/190 (46%)
Query: 181 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQH 239
D I HLA + P++ N+V +LN++ + + + F+ +S++ VYG P +
Sbjct: 83 DGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSEL 142
Query: 240 PQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA--RIFNTYGPR---MC 294
P E + G+ + Y + K E + +D + E + R FN G +
Sbjct: 143 PITEK---SQTGQGITNPYGQTKYMMEQILIDVGKA-NPEWNVVLLRYFNPVGAHKSGLI 198
Query: 295 IDDGRVVSN----FVAQ-ALRKEP-LTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPF 348
+D + V N +V+Q A+ K P LT+YGD T V D + ++ L +G HV F
Sbjct: 199 GEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIH-VVDLAKG-HVKAF 256
Query: 349 N----LGNPG 354
+ +GN G
Sbjct: 257 DRIKTVGNIG 266
Score = 94 (38.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY 148
+ ILVTG AGF+GSH V L++ G +V+ +DN+
Sbjct: 1 MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNF 33
Score = 78 (32.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 304 FVAQ-ALRKEP-LTVYGD------GKQTRSFQFVSDLVEGLI----RLMEGDHVGP--FN 349
+V+Q A+ K P LT+YGD G R + V DL +G + R+ ++G +N
Sbjct: 212 YVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYN 271
Query: 350 LGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRK 409
LG +++ ++ + ++++ R+ ++ D D + A++ LGW
Sbjct: 272 LGTGVGYSVRQMVDALKKVSGRDIPVKIGVPRPGDVASVYCDPSLAQEKLGWRAET---- 327
Query: 410 GLPLMVAD 417
GL M AD
Sbjct: 328 GLEEMCAD 335
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 124 (48.7 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 54/220 (24%), Positives = 92/220 (41%)
Query: 179 EVDQIYHLA--CPASPVHYKF-NPVKTIKTNVVGTLNMLG-----LAKRVGAR----FLL 226
E+++I H+ S V F +P+ K N++ T N+L L K+ R F+
Sbjct: 87 EINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILLGKKEELRNRLNFVH 146
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIF 286
ST EVYG+ ++ + +NP S Y K + + Y I + R
Sbjct: 147 VSTDEVYGEQDENASVDEK-SKLNPT---SPYAASKAAVDLIIQSYRYSYKISVTVIRAN 202
Query: 287 NTYGPR--------MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG--L 336
N YGPR M + + N +Q + ++ +T++GDG R + + D + L
Sbjct: 203 NVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKYLHIYDFINAIDL 262
Query: 337 IRLMEGDHV----------GP-FNLGNPGEFTMLELAEVV 365
+ + +G V G FN+G+ E L L + +
Sbjct: 263 VWMKQGSEVYHSTLESKMSGQIFNIGSDDEIDNLSLVKFI 302
Score = 68 (29.0 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 119 LVTGGAGFVGSHLVDRLMDRG--------DSVIVVDNYFTGKKDNLIHHFGNPRFELIRH 170
L+TGGAGF+GS+ +D +D+ D + V NY T +++ P F +
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQ---PNFRFLEM 69
Query: 171 DV 172
D+
Sbjct: 70 DL 71
Score = 52 (23.4 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 348 FNLGNPGEFTMLELAEVVQEI----------IDRNARIEFRPNTEDDPHKRKPDITKAKQ 397
FN+G+ E L L + + + +D + I F + + + + K K
Sbjct: 285 FNIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYSKYITFVQDRNYNDSRYSLNYEKIKS 344
Query: 398 LLGWEPRVTLRKGLPLMVADF 418
L GW P++ L GL ++ ++
Sbjct: 345 L-GWRPQIPLETGLRKLIDEY 364
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 160 (61.4 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 64/251 (25%), Positives = 116/251 (46%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHDVV 173
+ IL+TGGAG++GSH L++ +IVVDN ++L + +FE + +V+
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGKQFEFYKENVL 60
Query: 174 E-----PILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 225
I LE ++ + H A + P+ N++ + + + ++ + F+
Sbjct: 61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFI 120
Query: 226 LTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA-- 283
+S++ VYG P P E + P+ V + Y + K E + D + E IA
Sbjct: 121 FSSSATVYGIPKTLPITEEF-----PLSVTNPYGQTKLMIEQIMRDVAKA-DDEWSIALL 174
Query: 284 RIFNTYGP----RMCIDDGRVVSN---FVAQ-ALRK-EPLTVYGDGKQTRSFQFVSDLVE 334
R FN +G R+ D + +N +V Q A+ K + L ++G+ T+ V D +
Sbjct: 175 RYFNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIH 234
Query: 335 GLIRLMEGDHV 345
++ L +G HV
Sbjct: 235 -VVDLAKG-HV 243
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 159 (61.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 78/316 (24%), Positives = 126/316 (39%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
R+ + G G VGS + +L RGD +V+ T + NL+ + R HD
Sbjct: 5 RVFIAGHRGMVGSAIRRQLEQRGDVELVLR---TRDELNLL----DSRAV---HDFFASE 54
Query: 177 LLEVDQIYHLACPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 234
+DQ+Y A V P I N++ N++ A + + L +S +Y
Sbjct: 55 --RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP 112
Query: 235 DPLQHPQAET--YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR 292
+ P AE+ G + P Y K L Y+R G + R N YGP
Sbjct: 113 KLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 170
Query: 293 MCI--DDGRVVSNFV-----AQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH- 344
+ V+ + A A + V+G G R F V D+ I +ME H
Sbjct: 171 DNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHE 230
Query: 345 ---------VGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKA 395
+ N+G + T+ ELA+ + +++ R+ F + D ++ D+T+
Sbjct: 231 VWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRL 290
Query: 396 KQLLGWEPRVTLRKGL 411
QL GW ++L GL
Sbjct: 291 HQL-GWYHEISLEAGL 305
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 123 (48.4 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 40/165 (24%), Positives = 68/165 (41%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKD--NLIHHFGNPRFELIRHDVVEP 175
+LVTGG G++GS L++ G V+V DN + + N I + E + DV +
Sbjct: 6 VLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTDE 65
Query: 176 ILLE--------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGARFLL 226
+ +D + H A + P+ NV GT+ +L + + +
Sbjct: 66 AAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTNIVF 125
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMD 271
+S++ VYGD + P + P+G + Y K E D
Sbjct: 126 SSSATVYGDATRFPDMIPIPEHC-PLGPTNPYGNTKFAIELAITD 169
Score = 81 (33.6 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 27/111 (24%), Positives = 49/111 (44%)
Query: 310 RKEPLTVYGD------GKQTRSFQFVSDLVEGLIRLME---GDHVG--PFNLGNPGEFTM 358
++E L V+GD G R + + DL +G ++ + ++ G +NLG T+
Sbjct: 231 KREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTV 290
Query: 359 LELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRK 409
E+ + + R+ E P D + T+A LGW+ + TL +
Sbjct: 291 YEMIRAFSKAVGRDLPYEVAPRRAGDVLNLTSNPTRANTELGWKAQRTLEQ 341
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 161 (61.7 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 55/188 (29%), Positives = 84/188 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKD---NLIHHFGNP-RFELIRHDVV 173
+LVTGGAG++GSH RL+ V +VDN G L F R + I D+
Sbjct: 97 VLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLG 156
Query: 174 EPILLE-------VDQIYHLACPASPVHYKFNPVK---TIKTNVVGTLNMLGLAKRVGAR 223
+P+ +E D + H A A P+K I +N +G L +A+ +
Sbjct: 157 DPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLE--AMARHKVKK 214
Query: 224 FLLTSTSEVYGDPLQHPQAE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
+ +ST YG+P + P E T +NP Y + K+ AE + +D+ + + I
Sbjct: 215 LIYSSTCATYGEPEKMPITEDTPQVPINP------YGKAKKMAEDMILDFSKNSDMAVMI 268
Query: 283 ARIFNTYG 290
R FN G
Sbjct: 269 LRYFNVIG 276
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 128 (50.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 56/201 (27%), Positives = 91/201 (45%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDN----YFTGKK--DNL--IHHFGNPRFELIR 169
+LVTGGAG++GSH V +++ G +VI VDN Y +G K + L + + R
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYR 65
Query: 170 HDV-----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVG 221
D+ V + E +D + H A + P++ N+ GT +L +A
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNV 125
Query: 222 ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGLGIEA 280
+F+ +S++ VYG+P P E + P G S Y + K E + D + A
Sbjct: 126 FKFVYSSSATVYGEPKFLPVTEEH-----PTGNCTSPYGKTKYFTEEILKDLCKSDKRWA 180
Query: 281 RIA-RIFNTYGPRMCIDDGRV 300
++ R FN G + GR+
Sbjct: 181 VVSLRYFNPVGAHI---SGRI 198
Score = 72 (30.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 304 FVAQ-ALRKEP-LTVYG------DGKQTRSFQFVSDLVEGLIRLMEG----DHVGPF--N 349
++AQ A+ + P L+VYG DG R + + DL EG ++ ++ G F N
Sbjct: 212 YIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYN 271
Query: 350 LGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWE 402
LG +++L++ + ++ + D D T A + LGW+
Sbjct: 272 LGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWK 324
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 59/236 (25%), Positives = 101/236 (42%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPR-FELIRHDVVE 174
++IL++GGAG++GSH + + + + V+DN G K I R F+ D+ +
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKI-AIEDLQKIRAFKFFEQDLSD 59
Query: 175 ----PILLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 226
L E D I H A NP+K N V T N++ + G +F+
Sbjct: 60 FQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIF 119
Query: 227 TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG-IEARIARI 285
+ST+ YG+P +ET +P+ + Y K +E + D + I R
Sbjct: 120 SSTAATYGEPQTPVVSET-----SPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRY 174
Query: 286 FNTYGPRMCIDDGR------VVSNFVAQ--ALRKEPLTVYGDGKQTRSFQFVSDLV 333
FN G M G+ ++ A+ A +++ L ++GD T+ + D +
Sbjct: 175 FNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFI 230
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 57/239 (23%), Positives = 100/239 (41%)
Query: 181 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH 239
D I H A NP+K N V T N++ + G +F+ +ST+ YG+P
Sbjct: 73 DAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIFSSTAATYGEPQTP 132
Query: 240 PQAETY-WGNVNPIGVRS--CYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID 296
+ET +NP G RS +E R A ++ + +A Y
Sbjct: 133 VVSETSPLAPINPYG-RSKLMSEEVLRDASMANPEFKHCILRYFNVAGACMDYTLGQRYP 191
Query: 297 DGRVVSNFVAQ--ALRKEPLTVYGDGKQT------RSFQFVSDLVEG-LIRL--MEGDHV 345
++ A+ A +++ L ++GD T R F V D+ L L ++ +
Sbjct: 192 KATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHLATLDYLQENES 251
Query: 346 GPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPR 404
FN+G F++ E+ E ++++ + ++E P DP D +K + L W+P+
Sbjct: 252 NVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPSVLISDASKIRNLTSWQPK 310
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 123 (48.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPR------FEL-- 167
ILVTGGAGF+G+H V +L+ G V ++DN+ + + + P F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLGD 68
Query: 168 IRHDV-VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARF 224
+R+ +E + + D + H A + NP + N+VGT+N+ + +
Sbjct: 69 LRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCKM 128
Query: 225 LLTSTSE-VYGDPLQHPQAETY-WGNVNPIG 253
++ S+S VYG P + P E + +NP G
Sbjct: 129 MVFSSSATVYGQPEKIPCMEDFELKAMNPYG 159
Score = 76 (31.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 28/107 (26%), Positives = 44/107 (41%)
Query: 310 RKEPLTVYG------DGKQTRSFQFVSDLVEGLI----RLMEGDHVG--PFNLGNPGEFT 357
R L VYG DG R + V DL +G I +L +G +NLG +
Sbjct: 220 RLPELNVYGHDYPTEDGSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTS 279
Query: 358 MLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPR 404
+LE+ ++ + I+ P D KA++ LGW+ +
Sbjct: 280 VLEMVAAFEKASGKKIPIKLCPRRSGDATAVYASTEKAEKELGWKAK 326
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 136 (52.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 155 NLIHHFGNPRFELIRHDVVEPILL-------EVDQIYHLACPASPVHYKFN-PVKTIKTN 206
N + H G+ F L D+ + L E +IYHLA S V F+ P T + +
Sbjct: 81 NPVTHNGSASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQ-SHVKVSFDLPEYTAEVD 139
Query: 207 VVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGK 262
VGTL +L A R+ RF STSE+YG + PQ+E + P RS Y K
Sbjct: 140 AVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE-----LTPFYPRSPYAVAK 194
Query: 263 RTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQ-ALRKEPLTVYGDG 320
+ ++Y + A +FN PR R ++ VA+ +LR++ G+
Sbjct: 195 MYGYWIVVNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNL 254
Query: 321 KQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEV 364
R + + VE + R+++ D F + +F++ E +
Sbjct: 255 SALRDWGHAKEYVEAMWRILQQDTPDDFVIATGKQFSVREFCNL 298
Score = 63 (27.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
+RP TE + P KA++ LGWEP++T+ + + MVA
Sbjct: 334 YRP-TEVETLLGNP--AKARKTLGWEPKITVPELVKEMVA 370
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 136 (52.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 155 NLIHHFGNPRFELIRHDVVEPILL-------EVDQIYHLACPASPVHYKFN-PVKTIKTN 206
N + H G+ F L D+ + L E +IYHLA S V F+ P T + +
Sbjct: 81 NPVTHNGSASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQ-SHVKVSFDLPEYTAEVD 139
Query: 207 VVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGK 262
VGTL +L A R+ RF STSE+YG + PQ+E + P RS Y K
Sbjct: 140 AVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE-----LTPFYPRSPYAVAK 194
Query: 263 RTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQ-ALRKEPLTVYGDG 320
+ ++Y + A +FN PR R ++ VA+ +LR++ G+
Sbjct: 195 MYGYWIVVNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNL 254
Query: 321 KQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEV 364
R + + VE + R+++ D F + +F++ E +
Sbjct: 255 SALRDWGHAKEYVEAMWRILQQDTPDDFVIATGKQFSVREFCNL 298
Score = 63 (27.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 416
+RP TE + P KA++ LGWEP++T+ + + MVA
Sbjct: 334 YRP-TEVETLLGNP--AKARKTLGWEPKITVPELVKEMVA 370
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 151 (58.2 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 68/241 (28%), Positives = 107/241 (44%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNP--RF---E 166
Q ++ R V GG+GF+G H+V++L+ RG +V V D + F NP RF +
Sbjct: 34 QNQAKRCTVIGGSGFLGQHMVEQLLARGYAVNVFD---------IQQGFDNPQVRFFLGD 84
Query: 167 LIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 225
L + P L V+ ++H C ASP N + N +GT N++ K G + +
Sbjct: 85 LCSRQDLYPALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
Query: 226 LTSTSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTM---DYHRGLGIEA 280
LTS++ V G +++ + + + PI Y E K E + D + A
Sbjct: 142 LTSSASVIFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLGANDPEKNFLTTA 197
Query: 281 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
R +GPR D ++V + A + V G+GK F FV ++V G I
Sbjct: 198 --IRPHGIFGPR----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAA 251
Query: 341 E 341
E
Sbjct: 252 E 252
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 151 (58.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 63/239 (26%), Positives = 107/239 (44%)
Query: 111 LQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRH 170
++ S R V GG+GF+G HLV+RL+DRG +V V D + + + G +L
Sbjct: 5 IRPSSKRCTVIGGSGFLGRHLVERLVDRGYTVNVFDIRQAYELPGVTFYQG----DLCDK 60
Query: 171 DVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST 229
+ L EV ++H C ASP + + N+ GT ++ G + +LTS+
Sbjct: 61 LALVMALKEVSIVFH--C-ASPAPGSDDGALFQRVNIDGTRTVIQACHEAGVQKLILTSS 117
Query: 230 SEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDY-HRGLGIEARIARIF 286
+ V G +++ + + + PI Y E K E L ++ + G R
Sbjct: 118 ASVVFEGTDIKNGKEDLPYAK-KPIDY---YTETKIKQEKLVLEACSKEKGFLTVAIRPH 173
Query: 287 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV 345
+GPR D ++V V A R + + GDG F +V ++V G ++ +H+
Sbjct: 174 GIFGPR----DPQLVPILVDTARRGKMKFIIGDGSNLVDFTYVENVVHG--HILAAEHL 226
Score = 44 (20.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
+AKQ +G+ P V L++ + V + H
Sbjct: 314 RAKQDMGYRPLVPLQEAVVRTVESYPH 340
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 125 (49.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 55/200 (27%), Positives = 88/200 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNP----RFELIRHD 171
ILVTGGAGF+G+H V +L+++G V ++DN + + + P + E D
Sbjct: 9 ILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLGD 68
Query: 172 V-----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARF 224
+ +E + D + H A + NP + N+VGT+N+ + +
Sbjct: 69 LRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCKM 128
Query: 225 LLTSTSE-VYGDPLQHPQAETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARI 282
++ S+S VYG P P E + +NP G R+ K E + D H E +I
Sbjct: 129 MVFSSSATVYGQPEIVPCVEDFELQAMNPYG-RT-----KLFLEEIARDIHAAEP-EWKI 181
Query: 283 A--RIFNTYGPRMCIDDGRV 300
R FN G + GR+
Sbjct: 182 ILLRYFNPVGAH---ESGRI 198
Score = 73 (30.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 319 DGKQTRSFQFVSDLVEG----LIRLMEGDHVG--PFNLGNPGEFTMLELAEVVQEIIDRN 372
DG R + V DL +G L +L +G +NLG ++LE+ ++ +
Sbjct: 235 DGSAVRDYIHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKK 294
Query: 373 ARIEFRPNTEDDPHKRKPDITKAKQLLGWEPR 404
I+ P D KA++ LGW+ +
Sbjct: 295 IPIKLCPRRAGDATAVYASTQKAEKELGWKAK 326
>UNIPROTKB|E2QVH4 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0005811 GO:GO:0008203 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 ProteinModelPortal:E2QVH4 Ensembl:ENSCAFT00000030435
Uniprot:E2QVH4
Length = 373
Score = 153 (58.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 63/243 (25%), Positives = 110/243 (45%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHD 171
Q ++ + V GG+GF+G H+V++L+ RG +V V D + F NPR + D
Sbjct: 34 QNQASKCTVIGGSGFLGQHMVEQLLARGYTVNVFD---------MRQGFDNPRVQFFLGD 84
Query: 172 VVE-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 225
+ P L V ++H C ASP N + N +GT N++ K G + +
Sbjct: 85 LCSQQDLYPALKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
Query: 226 LTSTSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA 283
LTS++ V G +++ + + + PI Y E K E +D + +A
Sbjct: 142 LTSSASVIFEGVNIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKRNFLTMA 197
Query: 284 -RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEG 342
R +GPR D ++V + A + + + G+G+ F FV ++V G ++
Sbjct: 198 IRPHGIFGPR----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHG--HILAA 251
Query: 343 DHV 345
+H+
Sbjct: 252 EHL 254
Score = 42 (19.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
+A++++G+ P VT+ + V F +
Sbjct: 342 RARKVMGYRPLVTMDDAIERTVQSFHY 368
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 155 (59.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 62/234 (26%), Positives = 105/234 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
+ +V GG+GF+G H+V++L+D+G SV V D D + G +L + + P
Sbjct: 11 KCVVIGGSGFLGQHMVEKLLDKGYSVNVFDIQKRFDHDRVQFFLG----DLCNKEALLPA 66
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY-- 233
L +V +H C ASP N K N +GT ++ K G + +LTS++ V
Sbjct: 67 LQDVSVAFH--C-ASPAPSSDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTSSASVVFE 123
Query: 234 GDPLQHPQAETYWGNVNPIGVRSCYDEGK--RTAETLTMDYHRGLGIEARIARIFNTYGP 291
G +++ + + PI Y E K + E L+ + I R +GP
Sbjct: 124 GTDIKNGTEDLPYAK-KPIDY---YTETKILQEKEVLSANDPDNNFFTTAI-RPHGIFGP 178
Query: 292 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV 345
R D ++V + A + + GDGK F +V ++V G ++ +H+
Sbjct: 179 R----DPQLVPILIQAAKSGKMKFIIGDGKNLVDFTYVENVVHG--HILAAEHL 226
Score = 38 (18.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
+AK+ +G++P V+L + + + + H
Sbjct: 314 RAKRDMGYKPVVSLDEAIDRTLQSYPH 340
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 151 (58.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 65/245 (26%), Positives = 110/245 (44%)
Query: 110 GLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIR 169
GL S + V GG+GF+G H+V++L+ RG +V V D + F NPR +
Sbjct: 21 GLPNAS-KCTVIGGSGFLGQHMVEQLLARGYTVNVFD---------MRQGFDNPRVQFFL 70
Query: 170 HDVVE-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-R 223
D+ P L V ++H C ASP N + N +GT N++ K G +
Sbjct: 71 GDLCSQQDLYPALKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQK 127
Query: 224 FLLTSTSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEAR 281
+LTS++ V G +++ + + + PI Y E K E +D +
Sbjct: 128 LILTSSASVIFEGVNIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKRNFLT 183
Query: 282 IA-RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM 340
+A R +GPR D ++V + A + + + G+G+ F FV ++V G ++
Sbjct: 184 MAIRPHGIFGPR----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHG--HIL 237
Query: 341 EGDHV 345
+H+
Sbjct: 238 AAEHL 242
Score = 42 (19.8 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVADFRH 420
+A++++G+ P VT+ + V F +
Sbjct: 330 RARKVMGYRPLVTMDDAIERTVQSFHY 356
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 157 (60.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/185 (26%), Positives = 83/185 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLI-------HHFGNPRFELIRH 170
+LVTGGAG++GSH V L++ G +V DN D++ HH +L
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 73
Query: 171 DVVEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 227
+E + E +D + H A + P++ N++GT+ +L L ++ ++F+ +
Sbjct: 74 KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 133
Query: 228 STSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG--LGIEARIARI 285
S++ VYGD + P P+G + Y K E + D + + I R
Sbjct: 134 SSATVYGDATRFPNMIPIPEEC-PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 192
Query: 286 FNTYG 290
FN G
Sbjct: 193 FNPIG 197
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 112 (44.5 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 58/220 (26%), Positives = 92/220 (41%)
Query: 153 KDNLIHHFGNPRFELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVG 209
KD++ H+G +L + I+ EV +IY+L S V F+ + T + VG
Sbjct: 82 KDHMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVG 136
Query: 210 TLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTA 265
TL +L K G RF STSE+YG + PQ ET P RS Y K A
Sbjct: 137 TLRLLDAVKTCGLTDTVRFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYA 191
Query: 266 ETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQT 323
+ +++ + A +FN PR + R +S VA+ L + G+
Sbjct: 192 YWIVINFREAYNLFAVNGILFNHESPRRGSNFVTRKISRSVAKIHLGQLECFSLGNLDSM 251
Query: 324 RSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
R + D VE + +++ + F + ++ E E
Sbjct: 252 RDWGHAKDYVEAMWLMLQQEEPVDFVIATGEVHSVREFVE 291
Score = 65 (27.9 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-ADFR 419
+RP TE D + D +KA ++LGW+PRVT + + MV AD +
Sbjct: 329 YRP-TEVD--YLQGDSSKAFKVLGWKPRVTFEELVKEMVDADIK 369
Score = 57 (25.1 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 96 AEVQHVNAGGKVPLGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVV----DNYFTG 151
A+ GG + +RK ++TG G GS+L + L+ +G V + ++ TG
Sbjct: 2 AQCTATTTGGGMNGDSKRKRKVAIITGITGQDGSYLAELLLAKGYEVHGILRRSSSFNTG 61
Query: 152 KKDNLIHH 159
+ ++L H+
Sbjct: 62 RIEHLYHN 69
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 151 (58.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 82/341 (24%), Positives = 142/341 (41%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGN-----PRFELIRHDVV 173
L+TG G VGS + D L+ D ++ + DN I+H + R + D+
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDN-IYHLSDRINKKDRISIFYADLN 64
Query: 174 EPILLEV-------DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGAR-- 223
+ L+ D I+HLA + P F+ P++T++TN++GT N+L + + A+
Sbjct: 65 DYSSLQKLFESQRPDVIFHLAAQSYP-KTSFDIPIETLQTNIIGTANILENIRILKAKDG 123
Query: 224 ----FLLTSTSEVYGDP---LQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGL 276
+ S+SEVYG ++ + T+ G +P Y K + L Y
Sbjct: 124 YDPVVHVCSSSEVYGRAKVGIKLNEDTTFHG-ASP------YSISKIGTDYLGRFYGEAY 176
Query: 277 GIEARIARIFNTYGPRMC-IDDGRVVSNFVA--QALRKEPLTVYGDGKQTRSFQFVSDLV 333
I + R+ GPR + V+ +A + +EP+ G+ R+FQ D +
Sbjct: 177 NIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDAI 236
Query: 334 EGLIRLMEGDHVGPFNLGNP----GEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRK 389
L G G GE +L EV++ ++ + R + + E D + +
Sbjct: 237 RAYYLLSLESQKGKVPCGEAFNIAGE-EAFKLPEVIEILLSFSTRKDIK--IEQDEERLR 293
Query: 390 P--------DITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 422
P D TK K + W+P + RK ++ +R I
Sbjct: 294 PIDADYQMFDNTKIKSFINWKPEIAARKMFEDLLNHWRDEI 334
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 150 (57.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 75/310 (24%), Positives = 130/310 (41%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV 173
++ RI V G G VGS +V +L G +++ +G+ D F + D V
Sbjct: 3 RNARIYVAGHRGLVGSAIVRKLTAEGYGNLLLRT--SGELDLRDQAAVAAFFAAEQPDYV 60
Query: 174 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 233
+V I +A P + ++ + I+ NV+ + G++K + L ST +Y
Sbjct: 61 FLAAAKVGGI--VANNTYPAEFIYDNLM-IEANVIHSSYRTGVSKLL----FLGSTC-IY 112
Query: 234 GDPLQHPQAETYW--GNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGP 291
P E Y G + P Y K +L Y+R G A N YGP
Sbjct: 113 PKMASQPIREEYLLTGPLEP--TNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGP 170
Query: 292 RMCIDDGR------VVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVEGLIRLM---E 341
D + ++ F + P +TV+G G R F V D+ + + LM E
Sbjct: 171 NDNFDLEKSHVLPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRHHE 230
Query: 342 GDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGW 401
G+ + N+G+ E ++ +LA +V+ ++ + F + D ++ D+++ L GW
Sbjct: 231 GNDI--VNIGSGEEISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLHSL-GW 287
Query: 402 EPRVTLRKGL 411
R+ L G+
Sbjct: 288 RHRIGLEDGV 297
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 69/264 (26%), Positives = 114/264 (43%)
Query: 171 DVVEPILLEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA------R 223
DV++P D++Y+LA S V F P T G L +L + +
Sbjct: 91 DVIKP-----DEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHNIDNGRAIK 144
Query: 224 FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA 283
+ +SE++G PQ+ET P RS Y K A T++Y G+ A
Sbjct: 145 YYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLYACNG 198
Query: 284 RIFNTYGPRMCIDDGRVVSNFVAQALRK-----EPLTVYGDGKQTRSFQFVSDLVEGLIR 338
+FN PR V+ + +AL + + G+ + +R + F D VE +
Sbjct: 199 ILFNHESPRR---GENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAMWL 255
Query: 339 LMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNAR--IE-----FRPNTEDDPHKRKPD 391
+++ + + + T+ E +V + N + +E FRP TE D K D
Sbjct: 256 MLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRP-TEVD--NLKGD 312
Query: 392 ITKAKQLLGWEPRVTLRKGLPLMV 415
+KAK++LGW+P+V K + +MV
Sbjct: 313 ASKAKEMLGWKPKVGFEKLVKMMV 336
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 123 (48.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 42/168 (25%), Positives = 75/168 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK---DNLIHHFGN-PRFELIRHDVV 173
+L+TGG G++GS L++ V++VDN + D + G P F + D+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGKRPAFHNV--DIT 63
Query: 174 EPILL--------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGARF 224
+ L E+D + H A + P++ + NV G++++L + K
Sbjct: 64 DEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCNI 123
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDY 272
+ +S++ VYGD + P + PIG + Y K T E + D+
Sbjct: 124 VFSSSATVYGDATRVPNMIPIPEHC-PIGPTNTYGRTKSTIEDVISDH 170
Score = 71 (30.1 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 310 RKEPLTVYGD------GKQTRSFQFVSDLVEGLIRLME--GDH---VGPFNLGNPGEFTM 358
++E L V+GD G R + V DL +G + + D+ V +NLG+ T+
Sbjct: 229 QREKLLVFGDDYSSRDGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTV 288
Query: 359 LELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
E+ + ++ R+ E P + D + A + LGW+ + +
Sbjct: 289 FEMIKAFSSVVGRDLPYEVVPRRQGDVLDLTANPALANKELGWKTELRM 337
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 72/294 (24%), Positives = 120/294 (40%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPR-FELIRHDVVE 174
+R+LVTGG+G VG ++R++ + + K+ NL+ FE R V
Sbjct: 42 MRVLVTGGSGLVG-RAIERVVKEEGRGGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVI 100
Query: 175 PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 234
+ V ++ + + N V I NV+ T N G+ K V ST ++
Sbjct: 101 HLAAMVGGLFRNM--RQNLDFWRNNV-FINDNVLQTANEFGVVKVVSC----LSTC-IFP 152
Query: 235 DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR-- 292
D +P ET N P Y KR + + G + N +G
Sbjct: 153 DKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILTNVFGAHDN 212
Query: 293 MCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGDHVGP 347
I+DG V+ + + +KE PL V+G GK R F + DL + ++ E D V P
Sbjct: 213 FNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDP 272
Query: 348 F--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLL 399
++G E ++ + A+ V + + N + + + D K+ K +Q L
Sbjct: 273 IILSVGEEDELSIKDCADAVVDALGFNGDVIYDTSKADGQFKKTASNAKLRQYL 326
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 128 (50.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 61/230 (26%), Positives = 99/230 (43%)
Query: 143 IVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPILLEV--DQIYHLACPASPVHYKFN-P 199
I DN+ +K L H+G +L + IL +V D++Y+L S V F P
Sbjct: 49 IYQDNHEKNQKFFL--HYG----DLTDSSNLTRILKDVQPDEVYNLGAQ-SHVAVSFECP 101
Query: 200 VKTIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVR 255
T + +GTL +L + +G +F STSE+YG+ + PQ+ET P R
Sbjct: 102 EYTADVDAIGTLRLLEAIRFLGLEKKTKFYQASTSELYGEVQEIPQSET-----TPFHPR 156
Query: 256 SCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR-----MCIDDGRVVSNFVAQALR 310
S Y K A + ++Y G+ A +FN PR + R ++N +AQ L
Sbjct: 157 SPYAVAKMYAYWIVVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIAN-IAQGL- 214
Query: 311 KEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLE 360
E G+ R + D V +++ +H F + + ++ E
Sbjct: 215 -ESCLYLGNMDALRDWGHAKDYVRMQWMMLQQEHPDDFVIATGKQISVRE 263
Score = 61 (26.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVAD 417
D +KAK+ LGW P++T+ + MVA+
Sbjct: 325 DPSKAKEKLGWVPQITVEEMCSEMVAN 351
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 132 (51.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 60/224 (26%), Positives = 96/224 (42%)
Query: 155 NLIHHFGNPRFELIRHDVVEPILL-------EVDQIYHLACPASPVHYKFN-PVKTIKTN 206
N I H G+ F L D+ + L E ++YHLA S V F+ P T + +
Sbjct: 98 NPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQ-SHVKVSFDLPEYTAEVD 156
Query: 207 VVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGK 262
VGTL +L A R+ RF STSE+YG + PQ+E P RS Y K
Sbjct: 157 AVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEK-----TPFYPRSPYAVAK 211
Query: 263 RTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQ-ALRKEPLTVYGDG 320
+ ++Y + A +FN PR R ++ VA+ +L ++ G+
Sbjct: 212 MYGYWIVVNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNL 271
Query: 321 KQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEV 364
R + + VE + R+++ D F + +F++ E +
Sbjct: 272 SALRDWGHAREYVEAMWRILQHDSPDDFVIATGKQFSVREFCNL 315
Score = 56 (24.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVA 416
KAK+ LGWE +VT+ + + MVA
Sbjct: 365 KAKKTLGWEAKVTVPELVKEMVA 387
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 132 (51.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 60/224 (26%), Positives = 96/224 (42%)
Query: 155 NLIHHFGNPRFELIRHDVVEPILL-------EVDQIYHLACPASPVHYKFN-PVKTIKTN 206
N I H G+ F L D+ + L E ++YHLA S V F+ P T + +
Sbjct: 98 NPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQ-SHVKVSFDLPEYTAEVD 156
Query: 207 VVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGK 262
VGTL +L A R+ RF STSE+YG + PQ+E P RS Y K
Sbjct: 157 AVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEK-----TPFYPRSPYAVAK 211
Query: 263 RTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQ-ALRKEPLTVYGDG 320
+ ++Y + A +FN PR R ++ VA+ +L ++ G+
Sbjct: 212 MYGYWIVVNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNL 271
Query: 321 KQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEV 364
R + + VE + R+++ D F + +F++ E +
Sbjct: 272 SALRDWGHAREYVEAMWRILQHDSPDDFVIATGKQFSVREFCNL 315
Score = 56 (24.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 394 KAKQLLGWEPRVTLRKGLPLMVA 416
KAK+ LGWE +VT+ + + MVA
Sbjct: 365 KAKKTLGWEAKVTVPELVKEMVA 387
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 56/192 (29%), Positives = 94/192 (48%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFT---GKKD---NL--IHHFGNPRFELI 168
+ILVTGG G++GSH V L++ G +V+DN+ G+ D +L I F + + E
Sbjct: 4 KILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQIEFH 63
Query: 169 RHDVVE-PILLEVDQIY------HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ P L ++ +++ H A + P++ + N+ GT+N+L + + G
Sbjct: 64 ELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-LGI 278
R L+ S+S VYGDP + P E + P+G + Y + K E + D
Sbjct: 124 VRNLVFSSSATVYGDPQKLPIDEQH-----PVGGCTNPYGKTKYFIEEMIRDQCTAEKDW 178
Query: 279 EARIARIFNTYG 290
A + R FN G
Sbjct: 179 NAVLLRYFNPIG 190
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 68/296 (22%), Positives = 123/296 (41%)
Query: 118 ILVTGGAGFVGSHLVDRLM--DRGDSVIVVDNYFTGKKDNLIHHFGNPR--FELIRHDVV 173
+LVTGG+G VG + + D+ + V V F D + + R FE I+ V
Sbjct: 10 VLVTGGSGLVGKGIEKYVKETDKSNDVWV----FMRSSDCDLKSRESTRSYFEKIKPTHV 65
Query: 174 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-V 232
+ V ++ S + YK V+ + N+ N+L K ++ S +
Sbjct: 66 IHLAARVGGLF------SNMKYK---VEFFRENIDINDNVLACCKEFNVVKCVSCLSTCI 116
Query: 233 YGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR 292
+ D +P ET N P Y KR + L Y+ G + N YGP
Sbjct: 117 FPDKTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPH 176
Query: 293 --MCIDDGRVVSNFVAQ---ALRK-EPLTVYGDGKQTRSFQFVSDLVEGLIRLMEG-DHV 345
+ DG V+ + + A++ + LT+ G GK R F + DL + + + + +
Sbjct: 177 DNYHLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLNNYEEM 236
Query: 346 GPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLL 399
P ++G E ++ ++A ++ E ++ ++ F + D +K+ K K L+
Sbjct: 237 SPLILSVGEEDEISIADVARLITEAMEFKGKLIFDTSKADGQYKKTASNLKLKSLV 292
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 72/294 (24%), Positives = 119/294 (40%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPR-FELIRHDVVE 174
+R+LVTGG+G VG ++R++ + + K+ NL+ FE R V
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKEEGREGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVI 66
Query: 175 PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 234
+ V ++ + + N V I NV+ T N G+ K V ST ++
Sbjct: 67 HLAAMVGGLFRNM--RQNLDFWRNNV-FINDNVLQTANEFGVVKVVSC----LSTC-IFP 118
Query: 235 DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR-- 292
D +P ET N P Y KR + + G N +G
Sbjct: 119 DKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPTNVFGAHDN 178
Query: 293 MCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGDHVGP 347
I+DG V+ + + +KE PL V+G GK R F + DL + ++ E D V P
Sbjct: 179 FNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDP 238
Query: 348 F--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLL 399
++G E ++ + A+ V + + N + + + D K+ K +Q L
Sbjct: 239 IILSVGEEDELSIKDCADAVVDALGFNGDVIYDTSKADGQFKKTASNAKLRQYL 292
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 141 (54.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 83/313 (26%), Positives = 126/313 (40%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY-FTGKKDNLIHHFGNP-RFELIRHDVVE 174
RIL+TG GFVG +++ L+ G + +G + +L G R +L +
Sbjct: 5 RILITGANGFVGGYMIRELVAAGYQHSELHTLTVSGAEQSL--RIGQAHRCDLRDSASIH 62
Query: 175 PILLEVDQ--IYHLACPASPVHYKFNPVKTIKTN--VVGTLNMLGLAKRVGARFLLTSTS 230
+L EV I HLA A P K +P N V L LA A + +S
Sbjct: 63 RLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPHAVLVFAGSS 122
Query: 231 EVYGDPLQHPQAETYWGN-VNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTY 289
E YG G + P+ + Y K A+ + + R G+ A R FN
Sbjct: 123 ESYGASFNTVAGAVNEGTALRPL---TPYAATKAAAD-VALGQMRNDGLNAVRFRAFNHT 178
Query: 290 GPRMCIDDGRVVSNFVAQALR-----KEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEG-- 342
GP D VV++F AQ + P+ G+ R F V D+V G +E
Sbjct: 179 GPGQSPD--YVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDVVRGYRLALETEL 236
Query: 343 DHV--GPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNT--EDDPHKRKPDITKAKQL 398
D V G FNL + ++ + + +I + IE P ++D + D +A+
Sbjct: 237 DPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRKNDVPRTWGDANRARTE 296
Query: 399 LGWEPRVTLRKGL 411
LGW P + + L
Sbjct: 297 LGWVPYLAFEQTL 309
>UNIPROTKB|K7GMD9 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 EMBL:CU468868
Ensembl:ENSSSCT00000033816 Uniprot:K7GMD9
Length = 215
Score = 131 (51.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVV 173
K + V GG+GF+G H+V++L++RG +V V D K+ F NPR + D+
Sbjct: 24 KDRKCTVIGGSGFLGQHMVEQLLERGYAVNVFD-----KRQG----FDNPRVQFFLGDLC 74
Query: 174 E-----PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 227
P L V ++H A PA + N + N +GT N++ + G + +LT
Sbjct: 75 NQQDLYPALKGVSTVFHCASPAPSSN---NKELFYRVNYIGTKNVIETCREAGVQKLILT 131
Query: 228 STSEV 232
S++ V
Sbjct: 132 SSASV 136
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 75/296 (25%), Positives = 120/296 (40%)
Query: 116 LRILVTGGAGFVGSHLVDRLM-DRGDSVIVVDNYFTGKKD-NLIH-HFGNPRFELIRHDV 172
+R+LVTGG+G VG ++R++ D G + F KD NL+ F+ R
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKDEGREG--EEWTFLSSKDANLLSAEETRAIFQKYRPTH 64
Query: 173 VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV 232
V + V ++ + + N V I NV+ T N G+ K V ST +
Sbjct: 65 VIHLAAMVGGLFRNM--RQNLDFWRNNV-FINDNVLQTANEFGVVKVVSC----LSTC-I 116
Query: 233 YGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR 292
+ D +P ET N P Y KR + + G N +G
Sbjct: 117 FPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPTNVFGAH 176
Query: 293 --MCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGDHV 345
IDDG V+ + + +KE PL V+G GK R F + DL + ++ E D V
Sbjct: 177 DNFNIDDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEV 236
Query: 346 GPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLL 399
P ++G E ++ + A+ V + + + + + D K+ K +Q L
Sbjct: 237 DPIILSVGEEDELSIKDCADAVVDALGFKGDVIYDTSKADGQFKKTASNAKLRQYL 292
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 67/264 (25%), Positives = 114/264 (43%)
Query: 171 DVVEPILLEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKR----VG--AR 223
DV++P D++Y+LA S V F P T G L +L + G +
Sbjct: 103 DVIKP-----DEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVK 156
Query: 224 FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA 283
+ +SE++G PQ+ET P RS Y K A T++Y G+ A
Sbjct: 157 YYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNG 210
Query: 284 RIFNTYGPRMCIDDGRVVSNFVAQALRK-----EPLTVYGDGKQTRSFQFVSDLVEGLIR 338
+FN PR V+ + +AL + + G+ + +R + F D VE +
Sbjct: 211 ILFNHESPRR---GENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 267
Query: 339 LMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNAR--IE-----FRPNTEDDPHKRKPD 391
+++ + + + T+ E +V + N + +E FRP D+ + D
Sbjct: 268 MLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDN---LQGD 324
Query: 392 ITKAKQLLGWEPRVTLRKGLPLMV 415
+KAK++LGW+P+V K + +MV
Sbjct: 325 ASKAKEVLGWKPQVGFEKLVKMMV 348
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 73/261 (27%), Positives = 108/261 (41%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRG--DSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEP 175
+LVTG F+G +L RL + VI VD K +++ G R E +R D+ P
Sbjct: 26 VLVTGACRFLGGYLTARLAQNPLINRVIAVDAIAPSK--DMLRRMG--RAEFVRADIRNP 81
Query: 176 ILL------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLT 227
+ EVD + H A AS + NV+G + + ++ + R +L
Sbjct: 82 FIAKVIRNGEVDTVVHAAA-ASYAPRSGGSAALKELNVMGAMQLFAACQKAPSVRRVVLK 140
Query: 228 STSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMD-YHRGLG-----IEAR 281
STSEVYG P T R + +G ++L ++ Y R LG I
Sbjct: 141 STSEVYGSSPHDPVMFT-----EDSSSRRPFSQGF-PKDSLDIEGYVRALGRRRPDIAVT 194
Query: 282 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
I R+ N GP M D +S ++A L P T++G + + D + L R
Sbjct: 195 ILRLANMIGPAM--DT--TLSRYLAGPL--VP-TIFGRDARLQLLH-EQDALGALERAAM 246
Query: 342 GDHVGPFNLGNPGEFTMLELA 362
G FN+G G ML A
Sbjct: 247 AGKAGTFNIGADG-ILMLSQA 266
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 127 (49.8 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 41/127 (32%), Positives = 68/127 (53%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
R+LVTGGAGFVG++LV L+DRG V D + +L+ +P+ E+++ D+ +
Sbjct: 16 RVLVTGGAGFVGANLVTTLLDRGHWVRSFD-----RAPSLLP--AHPQLEVLQGDITDAD 68
Query: 177 LLE-----VDQIYHLAC-----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 225
+ +D I+H A + V ++ ++ NV GT N+L +R G RF+
Sbjct: 69 VCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQ-RSFAVNVGGTENLLHAGQRAGVQRFV 127
Query: 226 LTSTSEV 232
TS++ V
Sbjct: 128 YTSSNSV 134
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 301 VSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEG 342
V + A+R P ++G+G QT + +++G ++++ G
Sbjct: 175 VDGMLTCAIR--PSGIWGNGDQTMFRKLFESVLKGHVKVLVG 214
Score = 43 (20.2 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 392 ITKAKQLLGWEPRVTLRKGL 411
I KA++ LG+EP T ++ L
Sbjct: 322 IAKARRDLGYEPLFTTQQAL 341
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 55/208 (26%), Positives = 93/208 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK------DNL--IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G S +V+DN+ + ++L + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFE 63
Query: 169 RHDVVEPILLE-VDQIYHLACPASPVHYKF------NPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + + YH K P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-LGI 278
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKAW 178
Query: 279 EARIARIFNTYGPRM--CI-DDGRVVSN 303
A + R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPIGAHASGCIGEDPQGIPN 206
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK--DNL------IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G S +V+DN+ + D++ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFE 63
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ GT+ +L + + G
Sbjct: 64 EMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-LGI 278
+ L+ S+S VYG+P P E + P G + Y + K E + D R
Sbjct: 124 VKSLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIQDLCRADTAW 178
Query: 279 EARIARIFNTYG 290
A + R FN G
Sbjct: 179 NAVLLRYFNPIG 190
>WB|WBGene00019813 [details] [associations]
symbol:ger-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose
reductase activity" evidence=IEA] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 KO:K02377 GO:GO:0050577 OMA:IHCAGRV HSSP:P32055
GeneTree:ENSGT00390000004681 EMBL:FO081121 EMBL:AM231686 PIR:T16645
RefSeq:NP_498540.1 UniGene:Cel.10235 ProteinModelPortal:G5EER4
SMR:G5EER4 EnsemblMetazoa:R01H2.5 GeneID:187512
KEGG:cel:CELE_R01H2.5 CTD:187512 WormBase:R01H2.5 NextBio:935530
Uniprot:G5EER4
Length = 315
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 73/295 (24%), Positives = 116/295 (39%)
Query: 118 ILVTGGAGFVGSHL---VDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVE 174
ILVTGG G VGS + V+ R D V F G KD + + R EL + V+
Sbjct: 4 ILVTGGTGLVGSAIKKVVETTEKRDDEKWV----FIGSKDCDLENLEETR-ELF--ESVK 56
Query: 175 PILLEVDQIYHLACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-V 232
P + HLA + H + ++ + N+ N+L L ++ S +
Sbjct: 57 PT-----HVIHLAAMVGGLFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLSTCI 111
Query: 233 YGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR 292
+ D +P ET P Y KR + L Y + G + N +GP
Sbjct: 112 FPDKTSYPIDETMVHLGPPHDSNFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGPH 171
Query: 293 --MCIDDGRVVSNFVAQALRKE----PLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGDHV 345
+ G V+ + +A + PL VYG G R F + DL IR++ E + V
Sbjct: 172 DNYNLQSGHVLPALIHKAYVAQRDGTPLQVYGSGTPLRQFIYSIDLARLFIRVVREYEDV 231
Query: 346 GPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQL 398
P ++ E ++ + V + ID +E+ + D K+ K +L
Sbjct: 232 EPIILSVNESDEVSIRDAVSAVVKAIDFTGDVEYDTSKADGQFKKTASNEKLLKL 286
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 134 (52.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 67/296 (22%), Positives = 120/296 (40%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKD-NLIHHFGNPRFELIRHDVVE 174
+R+LVTGG+G VG ++R++ G+ + F KD NL+ +P +
Sbjct: 5 MRVLVTGGSGLVG-RAIERVVKEGEGREGEEWIFLSSKDANLL----SPEETKAVFEKHR 59
Query: 175 PILLEVDQIYHLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-V 232
P + HLA + + ++NV N+L A G +++ S +
Sbjct: 60 PT-----HVIHLAAMVGGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCI 114
Query: 233 YGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYG-- 290
+ D +P ET N P Y KR + + + N +G
Sbjct: 115 FPDKTTYPIDETMIHNGPPHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGCH 174
Query: 291 PRMCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVEGLIRLM-EGDHV 345
I+DG V+ + + +KE PL V+G G+ R F + DL + ++ E D V
Sbjct: 175 DNFNIEDGHVLPGLIHKTYIAKKEGKPLVVWGSGRPLRQFIYSLDLARLFVWVLREYDEV 234
Query: 346 GPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLL 399
P ++G E ++ + A+ V E ++ + + + D K+ K ++ L
Sbjct: 235 EPIILSVGEEDELSIKDAADAVVEALEFTGDVIYDTSKADGQFKKTASNAKLRKYL 290
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 134 (52.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK--DNL------IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G S +V+DN+ + D++ + E
Sbjct: 3 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFE 62
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ GT+ +L + + G
Sbjct: 63 EMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHG 122
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-LGI 278
+ L+ S+S VYG+P P E + P G + Y + K E + D R
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCRADTAW 177
Query: 279 EARIARIFNTYG 290
A + R FN G
Sbjct: 178 NAVLLRYFNPIG 189
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 133 (51.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 65/253 (25%), Positives = 107/253 (42%)
Query: 116 LRILVTGGAGFVGSHLVDRLMD--RGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHD 171
+ +L+TGG G++GSH V L+ + +++VDN L I N I+ D
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKTVTFIKAD 60
Query: 172 VVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG-LAKRVGAR 223
V + LE ++ + H A + P+ + NV GT+ +L +AK
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKN 120
Query: 224 FLLTSTSEVYGDPLQHPQAETYWGNV-NPIGVRSCYDEGKRTAETLTMDYHRG-LGIEAR 281
+ +S++ VYG+ + P ET + NP Y + K E + D +
Sbjct: 121 LVFSSSATVYGNNVS-PLNETMATSATNP------YGQTKLMVEHVLFDLAKSDASWSIA 173
Query: 282 IARIFNTYGPRMC--IDDGR--VVSN---FVAQAL--RKEPLTVYGDGKQTRSFQFVSDL 332
R FN G I + + +N +VAQ R E L ++GD T+ V D
Sbjct: 174 CLRYFNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDY 233
Query: 333 VEGLIRLMEGDHV 345
+ ++ L +G HV
Sbjct: 234 IH-VVDLAQG-HV 244
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 114 (45.2 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 58/218 (26%), Positives = 90/218 (41%)
Query: 155 NLIHHFGNPRFELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTL 211
N+ H+G +L + I+ EV +IY+L S V F+ + T + VGTL
Sbjct: 57 NMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTL 111
Query: 212 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAET 267
+L K G RF STSE+YG + PQ ET P RS Y K A
Sbjct: 112 RLLDAVKTCGLIGSVRFYQASTSELYGKVQETPQKET-----TPFYPRSPYGAAKLYAYW 166
Query: 268 LTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRS 325
+ +++ + A +FN PR + R +S VA+ L + G+ R
Sbjct: 167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 226
Query: 326 FQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
+ D VE + +++ D F + ++ E E
Sbjct: 227 WGHAKDYVEAMWLMLQSDEPEDFVIATGEVHSVREFVE 264
Score = 61 (26.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRV 405
+RP TE D + D TKAKQ L W+PRV
Sbjct: 302 YRP-TEVD--FLQGDCTKAKQKLNWKPRV 327
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 111 (44.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 68/280 (24%), Positives = 120/280 (42%)
Query: 102 NAGGKVPLGLQRKSLRILVTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGK-----KDN 155
+ GG+ +G ++ +L +TG G ++ L+++ + V ++ TG+ K++
Sbjct: 1 DGGGE--MGDKKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNS 58
Query: 156 LIHHFGNPRF---ELIRHDVVEPILLEV--DQIYHLACPASPVHYKFNPVK-TIKTNVVG 209
H GN + +L + I+ EV ++IY+L S V F+ + T + VG
Sbjct: 59 QAHIEGNMKLHYGDLTDSTCLVKIINEVKPNEIYNLGAQ-SHVKISFDLAEYTADVDGVG 117
Query: 210 TLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTA 265
TL +L K G +F STSE++G + PQ ET P RS Y K A
Sbjct: 118 TLRLLDAIKTCGLINSVKFYQASTSELFGKVQEIPQKET-----TPFYPRSPYGAAKLYA 172
Query: 266 ETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQT 323
+ +++ + A +FN PR + R +S VA+ L + G+
Sbjct: 173 YWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMDSFSLGNLDAK 232
Query: 324 RSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
R + D VE + +++ D F + ++ E E
Sbjct: 233 RDWGHARDYVEAMWLMLQTDEPEDFVIATGEVHSVREFVE 272
Score = 64 (27.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D TKA+Q L W+PRVT + + MV AD
Sbjct: 310 YRP-TEVD--FLQGDCTKARQKLNWKPRVTFDELVREMVDAD 348
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 56/188 (29%), Positives = 82/188 (43%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGK-------KDNLIHHFGN---PRFEL 167
ILVTGGAG++GSH V +L+ G + +V+DN KD H N + +L
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 168 IRHDVVEPILLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 225
+E + E D + H A + P+ N++ T+ +L + G + L
Sbjct: 65 RDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKKL 124
Query: 226 LTSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIA- 283
+ S+S VYG P + P E +P+ S Y K E + D RG E RI
Sbjct: 125 VFSSSATVYGWPKEVPCTEE-----SPLSGMSPYGRTKLFIEDICRDVQRG-DPEWRIIM 178
Query: 284 -RIFNTYG 290
R FN G
Sbjct: 179 LRYFNPVG 186
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 114 (45.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 70/290 (24%), Positives = 117/290 (40%)
Query: 93 YEAAEVQHVNAGGKVPLGLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFT 150
+ +A G +G R I +TG G ++ L+++ + V ++ T
Sbjct: 3 HASARFPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT 62
Query: 151 GKKDNLI-----HHFGNPRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPV 200
G+ ++L H GN + +L + I+ EV +IY+L S V F+
Sbjct: 63 GRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLA 121
Query: 201 K-TIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVR 255
+ T + VGTL +L K G +F STSE+YG + PQ ET P R
Sbjct: 122 EYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPR 176
Query: 256 SCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEP 313
S Y K A + +++ + A +FN PR + R +S VA+ L +
Sbjct: 177 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLE 236
Query: 314 LTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
G+ R + D VE + +++ D F + ++ E E
Sbjct: 237 CFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 286
Score = 61 (26.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRV 405
+RP TE D + D TKAKQ L W+PRV
Sbjct: 324 YRP-TEVD--FLQGDCTKAKQKLNWKPRV 349
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 113 (44.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 70/287 (24%), Positives = 115/287 (40%)
Query: 96 AEVQHVNAGGKVPLGLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKK 153
A G +G R I +TG G ++ L+++ + V ++ TG+
Sbjct: 6 ARCSSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI 65
Query: 154 DNLI-----HHFGNPRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-T 202
++L H GN + +L + I+ EV +IY+L S V F+ + T
Sbjct: 66 EHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYT 124
Query: 203 IKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCY 258
+ VGTL +L K G +F STSE+YG + PQ ET P RS Y
Sbjct: 125 ADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPY 179
Query: 259 DEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTV 316
K A + +++ + A +FN PR + R +S VA+ L +
Sbjct: 180 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFS 239
Query: 317 YGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
G+ R + D VE + +++ D F + ++ E E
Sbjct: 240 LGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 286
Score = 62 (26.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D TKAKQ L W+PRV + + MV AD
Sbjct: 324 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMVHAD 362
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 73/252 (28%), Positives = 106/252 (42%)
Query: 117 RILVTGGAGFVGSHLVDRLMD-RGDS-VIVVDNYFTGKKDNLIHHFGNPRFELIR----- 169
+ILVTG G +GS LV +L D G S VI D T D+ + G P FE +
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRET---DSEVVTSG-P-FETLDVTDGQ 57
Query: 170 --HDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 227
HD+ + EVD I HLA S K NP+ N+ G +N L A+ + +F
Sbjct: 58 KLHDIAKRN--EVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTP 114
Query: 228 STSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFN 287
S+ +G P P+ T + + Y K E L YH+ G++ R R F
Sbjct: 115 SSIGAFG-P-STPKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVR-FP 169
Query: 288 TYGPRMCIDDGRVVSNFVA---QALRKEPLTVY-GDGKQTRSFQFVSDLVEGLIRLMEGD 343
+ G V +A++K T Y +G ++ D ++ +I LME D
Sbjct: 170 GLISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEAD 228
Query: 344 -----HVGPFNL 350
H FN+
Sbjct: 229 PSKLVHRNAFNI 240
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 73/252 (28%), Positives = 106/252 (42%)
Query: 117 RILVTGGAGFVGSHLVDRLMD-RGDS-VIVVDNYFTGKKDNLIHHFGNPRFELIR----- 169
+ILVTG G +GS LV +L D G S VI D T D+ + G P FE +
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRET---DSEVVTSG-P-FETLDVTDGQ 57
Query: 170 --HDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 227
HD+ + EVD I HLA S K NP+ N+ G +N L A+ + +F
Sbjct: 58 KLHDIAKRN--EVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTP 114
Query: 228 STSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFN 287
S+ +G P P+ T + + Y K E L YH+ G++ R R F
Sbjct: 115 SSIGAFG-P-STPKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVR-FP 169
Query: 288 TYGPRMCIDDGRVVSNFVA---QALRKEPLTVY-GDGKQTRSFQFVSDLVEGLIRLMEGD 343
+ G V +A++K T Y +G ++ D ++ +I LME D
Sbjct: 170 GLISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEAD 228
Query: 344 -----HVGPFNL 350
H FN+
Sbjct: 229 PSKLVHRNAFNI 240
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/185 (27%), Positives = 83/185 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIH-HF----GNPRFEL-IR-H 170
ILVTGGAG++GSH V L+ G V++VDN D + F P +++ IR +
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 171 DVVEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 228
+ + + + + + H A + P+ NV GT+N+L + K + ++ S
Sbjct: 66 EQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTIVFS 125
Query: 229 TSE-VYGDPLQHPQAETYWGNVN-PIGVRSCYDEGKRTAETLTMD-YHRGLGIEARIARI 285
+S VYGD + + P+ + Y K E++ D Y+ + I R
Sbjct: 126 SSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRY 185
Query: 286 FNTYG 290
FN G
Sbjct: 186 FNPIG 190
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/121 (24%), Positives = 49/121 (40%)
Query: 304 FVAQAL--RKEPLTVYG------DGKQTRSFQFVSDLVEGLI-------RLMEGDHVGPF 348
++AQ R+E L+++G DG R + V DL +G I L +
Sbjct: 211 YLAQVAIGRREKLSIFGNDYNSRDGTPIRDYIHVVDLAKGHIAALAYLKNLQSKGLYREW 270
Query: 349 NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDD--PHKRKPDITKAKQLLGWEPRVT 406
NLG T+ E+ +++ R E D KPD +A + L W+ +T
Sbjct: 271 NLGTGKGSTVFEVYHAFSKVVGRELPHEVVGRRAGDVLDLTAKPD--RANKELQWKTELT 328
Query: 407 L 407
+
Sbjct: 329 I 329
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/185 (27%), Positives = 83/185 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIH-HF----GNPRFEL-IR-H 170
ILVTGGAG++GSH V L+ G V++VDN D + F P +++ IR +
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 171 DVVEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 228
+ + + + + + H A + P+ NV GT+N+L + K + ++ S
Sbjct: 66 EQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTIVFS 125
Query: 229 TSE-VYGDPLQHPQAETYWGNVN-PIGVRSCYDEGKRTAETLTMD-YHRGLGIEARIARI 285
+S VYGD + + P+ + Y K E++ D Y+ + I R
Sbjct: 126 SSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRY 185
Query: 286 FNTYG 290
FN G
Sbjct: 186 FNPIG 190
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/121 (24%), Positives = 49/121 (40%)
Query: 304 FVAQAL--RKEPLTVYG------DGKQTRSFQFVSDLVEGLI-------RLMEGDHVGPF 348
++AQ R+E L+++G DG R + V DL +G I L +
Sbjct: 211 YLAQVAIGRREKLSIFGNDYNSRDGTPIRDYIHVVDLAKGHIAALAYLKNLQSKGLYREW 270
Query: 349 NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDD--PHKRKPDITKAKQLLGWEPRVT 406
NLG T+ E+ +++ R E D KPD +A + L W+ +T
Sbjct: 271 NLGTGKGSTVFEVYHAFSKVVGRELPHEVVGRRAGDVLDLTAKPD--RANKELQWKTELT 328
Query: 407 L 407
+
Sbjct: 329 I 329
>WB|WBGene00012394 [details] [associations]
symbol:hsd-1 species:6239 "Caenorhabditis elegans"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0016616 "oxidoreductase activity, acting
on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IGI] [GO:0016126 "sterol biosynthetic process"
evidence=IMP] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0002119 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0016126
EMBL:AL032655 PIR:T27323 RefSeq:NP_493402.1 UniGene:Cel.28002
ProteinModelPortal:Q9XWF0 EnsemblMetazoa:Y6B3B.11 GeneID:189371
KEGG:cel:CELE_Y6B3B.11 UCSC:Y6B3B.11 CTD:189371 WormBase:Y6B3B.11
HOGENOM:HOG000020706 InParanoid:Q9XWF0 OMA:VLRFNGI NextBio:942172
Uniprot:Q9XWF0
Length = 462
Score = 111 (44.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 48/186 (25%), Positives = 77/186 (41%)
Query: 156 LIHHFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG 215
L HH + ++ L +VD +YHLA Y + + N VGT+N+L
Sbjct: 119 LKHHVAFVKCSFDDECTMKTALEQVDTVYHLAAVGMTGQYARDRKACMDINAVGTMNLLI 178
Query: 216 LAKRVGA-RFLLTSTSEVY--GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDY 272
A+ G RF+ TS+ V G+P+ + E + P + Y E K AE +
Sbjct: 179 WARNSGVQRFIYTSSVGVVFSGEPMYNATEEVGY----PDDFYNYYCESKAHAERIVQKA 234
Query: 273 HRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 332
G + + R YGP RVV F+ + G QT+ V++
Sbjct: 235 S-GHRMRTTVLRFNGIYGPGEKRVTERVVK-FMLTGMWIATCKPNGVEAQTQ-LSSVANC 291
Query: 333 VEGLIR 338
++GL++
Sbjct: 292 IQGLVK 297
Score = 54 (24.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 117 RILVTGGAGFVGSHLVDRL--MDRGDSV 142
++L+TGGAG + +LV +L M R DS+
Sbjct: 46 KVLITGGAGHLAENLVAKLEEMTR-DSI 72
Score = 50 (22.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 422
+I KA++ LG+EP V+ +P ++ + HR+
Sbjct: 383 NIEKAERDLGYEPSVS---AIPEIIEHYLHRL 411
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/208 (25%), Positives = 93/208 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFT---GK---KDNL--IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G S +V+DN+ GK ++L + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFE 63
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ G++ +L + + G
Sbjct: 64 EMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMRAHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-LGI 278
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKYFIEEMIRDLCQADKAW 178
Query: 279 EARIARIFNTYGPRM--CI-DDGRVVSN 303
A + R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPIGAHASGCIGEDPQGIPN 206
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 112 (44.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 70/287 (24%), Positives = 115/287 (40%)
Query: 96 AEVQHVNAGGKVPLGLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKK 153
A G +G R I +TG G ++ L+++ + V ++ TG+
Sbjct: 6 ARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI 65
Query: 154 DNLI-----HHFGNPRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-T 202
++L H GN + +L + I+ EV +IY+L S V F+ + T
Sbjct: 66 EHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYT 124
Query: 203 IKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCY 258
+ VGTL +L K G +F STSE+YG + PQ ET P RS Y
Sbjct: 125 ADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPY 179
Query: 259 DEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTV 316
K A + +++ + A +FN PR + R +S VA+ L +
Sbjct: 180 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFS 239
Query: 317 YGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
G+ R + D VE + +++ D F + ++ E E
Sbjct: 240 LGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 286
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D TKAKQ L W+PRV + + MV AD
Sbjct: 324 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMVHAD 362
>UNIPROTKB|F1NYB5 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 OMA:ASVHVMN
GO:GO:0042350 EMBL:AADN02037342 IPI:IPI00585390
Ensembl:ENSGALT00000025982 Uniprot:F1NYB5
Length = 260
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 50/198 (25%), Positives = 80/198 (40%)
Query: 212 NMLGLAKRVGARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTM 270
N+L A G + +++ S ++ D +P ET N P Y KR +
Sbjct: 35 NVLHSAYECGVQKVVSCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNR 94
Query: 271 DYHRGLGIEARIARIFNTYGPR--MCIDDGRVVSNFVAQA-LRKE---PLTVYGDGKQTR 324
Y G N +GP I+DG V+ + + L K+ LTV+G GK R
Sbjct: 95 GYFEQHGCRFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVYLAKQNGSALTVWGTGKPRR 154
Query: 325 SFQFVSDLVEGLIRLM-EGDHVGPF--NLGNPGEFTMLELAEVVQEIIDRNARIEFRPNT 381
F + DL + ++ E + V P ++G E ++ E AE + E +D + F
Sbjct: 155 QFIYSLDLARLFVWVLREYEEVEPIILSVGEEDEVSIREAAEAIVEAMDFRGELIFDTTK 214
Query: 382 EDDPHKRKPDITKAKQLL 399
D K+ K + L
Sbjct: 215 ADGQFKKTASNAKLRHYL 232
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 55/224 (24%), Positives = 97/224 (43%)
Query: 118 ILVTGGAGFVGSHLVDRLMD--RGDSVIVVDNYFT-GKKDNLIHHFGNPRFELIRHDVVE 174
+LV GG GF+GSH+V L+D + +V VD T +++ + +H ++ + +
Sbjct: 13 VLVVGGCGFLGSHIVRMLLDDYKCSAVSAVDLRCTRNRREGVQYHDA----DITNAERLV 68
Query: 175 PILLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTSE 231
+ EV D + H A P + + + K NV GT ++ K+ G + L+ TS++
Sbjct: 69 SVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAGVKALVFTSSAS 128
Query: 232 VYGDPLQHP-QAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR-GLGIEARIARIFNTY 289
V D + A+ W + Y + K AE + + + G + A I R +
Sbjct: 129 VISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPGKLLTAAI-RPSGIF 187
Query: 290 GPRMCIDDGRVVSNFVAQALRKEPLTVY-GDGKQTRSFQFVSDL 332
G D V +N V + R+ V GD F + ++
Sbjct: 188 GE----GDSMVTANLV-KTYREGKWKVQVGDNNNLFDFTYAGNV 226
Score = 57 (25.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 391 DITKAKQLLGWEPRVTLRKGL 411
+ITKAKQ LG+ P V++ +G+
Sbjct: 332 NITKAKQRLGYAPIVSMEEGV 352
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 72/276 (26%), Positives = 118/276 (42%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNYFTGKKD-NLIHHFGNPRFELIRHDVVEP 175
I+VTGGAGF+GS++V L D+G ++VVDN G K NL+ N + + D +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFLIQ 59
Query: 176 ILL-----EVDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 229
I+ +V+ I+H AC ++ +++ + N + +L FL S+
Sbjct: 60 IMAGEEFGDVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116
Query: 230 SEVYGDPLQH-PQAETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGLGIEARIARIFN 287
+ YG ++ Y +N G + +DE R + L + +G R FN
Sbjct: 117 AATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVR--QILPEANSQIVGF-----RYFN 169
Query: 288 TYGPRMCIDDGRVVS---NFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVEGLIRLMEGD 343
YGPR G + S + Q E P G R F +V D+ + + +E
Sbjct: 170 VYGPREG-HKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228
Query: 344 HVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRP 379
G FNLG + +A+ + +IE+ P
Sbjct: 229 VSGIFNLGTGRAESFQAVADATLAY-HKKGQIEYIP 263
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 110 (43.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 57/218 (26%), Positives = 90/218 (41%)
Query: 155 NLIHHFGNPRFELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTL 211
N+ H+G +L + I+ EV +IY+L S V F+ + T + VGTL
Sbjct: 49 NMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTL 103
Query: 212 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAET 267
+L K G +F STSE+YG + PQ ET P RS Y K A
Sbjct: 104 RLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYW 158
Query: 268 LTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRS 325
+ +++ + A +FN PR + R +S VA+ L + G+ R
Sbjct: 159 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 218
Query: 326 FQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
+ D VE + +++ D F + ++ E E
Sbjct: 219 WGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 256
Score = 62 (26.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D TKAKQ L W+PRV + + MV AD
Sbjct: 294 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMVHAD 332
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 110 (43.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 57/218 (26%), Positives = 90/218 (41%)
Query: 155 NLIHHFGNPRFELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTL 211
N+ H+G +L + I+ EV +IY+L S V F+ + T + VGTL
Sbjct: 50 NMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTL 104
Query: 212 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAET 267
+L K G +F STSE+YG + PQ ET P RS Y K A
Sbjct: 105 RLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYW 159
Query: 268 LTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRS 325
+ +++ + A +FN PR + R +S VA+ L + G+ R
Sbjct: 160 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 219
Query: 326 FQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
+ D VE + +++ D F + ++ E E
Sbjct: 220 WGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 257
Score = 62 (26.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D TKAKQ L W+PRV + + MV AD
Sbjct: 295 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMVDAD 333
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 65/262 (24%), Positives = 110/262 (41%)
Query: 181 DQIYHLAC-PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GARFLLTSTSEVYGDPLQ 238
D + H+A P + Y+ P++T TNV+GTL++L A+ R ++ T++
Sbjct: 85 DVLIHMAAQPLVRLSYR-EPLETYATNVMGTLHVLEAARLCPNLRAIVNVTTDKC----- 138
Query: 239 HPQAETYWG--NVNPIGVRSCYDEGKRTAETLTMDYHRGL-----GIEARIARIFNTYGP 291
+ E WG P+G Y K E +T Y AR N G
Sbjct: 139 YENREWEWGYREDEPMGGHDPYSNSKGCVELITASYRNSFFNTPQAAALASARAGNVIGG 198
Query: 292 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME-----GDHVG 346
+D R++ + + + +P+TV + TR +Q V + + G + L E G
Sbjct: 199 GDWAED-RLIPDILRAFEKGQPVTVRNP-QATRPWQHVLEPLSGYLVLAEHLWKNGHQFA 256
Query: 347 P-FNLGNPGEFTMLELAEVVQEIIDR-NARIEFRPNTEDDPHKR---KPDITKAKQLLGW 401
+N G P + + ++ ++D ++ + + PH+ K DI+KA+ L W
Sbjct: 257 QGWNFG-PKDEDARPVEWILNYMVDSWGDGAHWQLDRDSHPHEANYLKLDISKARARLNW 315
Query: 402 EPRVTLRKGLPLMVADFRHRIF 423
P L K L +V HR F
Sbjct: 316 APTWNLEKTLSRIVQ--WHRAF 335
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 109 (43.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 55/228 (24%), Positives = 88/228 (38%)
Query: 119 LVTGGAGFVGSHLVD----------RLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRF--- 165
+VTGG GF HLV+ R+ D ++++ G D + G ++
Sbjct: 13 VVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRS-GRVQYISA 71
Query: 166 ELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 224
+L V + ++H+A P S ++ N NV GT N++ VG R
Sbjct: 72 DLRDKSQVVKAFQGAEVVFHMAAPDSSIN---NHQLQYSVNVQGTQNVIDACVDVGVKRL 128
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ TS+ V D + H PI Y K E L M + G+ R
Sbjct: 129 IYTSSPSVVFDGV-HGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCIR 187
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 332
+ +GP D +V + VA A + + GDG F +V ++
Sbjct: 188 PSSIFGP----GDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENV 231
Score = 69 (29.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVADFRHRIFGDQKE 428
D TKAK LG+ P V L++G+ + F H G Q +
Sbjct: 331 DSTKAKDRLGYAPVVPLQEGIRRTIDSFSHLTAGSQSK 368
>UNIPROTKB|I3LGP6 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 GO:GO:0042350
Ensembl:ENSSSCT00000029895 OMA:KNTHINI Uniprot:I3LGP6
Length = 318
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 78/295 (26%), Positives = 127/295 (43%)
Query: 109 LGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
+G ++S RILVTGG+G VG + +++ G + D F KD + + R L
Sbjct: 3 MGEPQRSTRILVTGGSGLVG-RAIQKVVADGARLPGEDWVFVSSKDADLTNAAQTR-ALF 60
Query: 169 RHDVVEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ V+P + HLA + + K+N + + NV ++L A VGAR ++
Sbjct: 61 --EKVQPT-----HVIHLAAMVGGLFRNMKYN-LDFWRKNVHINDSVLHSAFEVGARKVV 112
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
+ S ++ D +P E+ V IG R+ G+ A +A R+
Sbjct: 113 SCLSTCIFPDKTTYPIDESM---VREIG-RA--XRGRARAACSGRP-GPAFQTQAPPGRL 165
Query: 286 FNTYGPRMCIDDGRVVSNFVAQ----AL-----RKEPLTVYGDGKQTRSFQFVSDLVEGL 336
F + I+DG V+ + + AL R L V+G G+ R F + DL
Sbjct: 166 FGPHD-NFNIEDGHVLPGLIHKVHLAALPLPTGRGSALMVWGTGRPRRQFIYSLDLARLF 224
Query: 337 IRLM-EGDHVGPFNL--GNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKR 388
+ ++ E D V P L G G ++ E AE V E +D + + F D K+
Sbjct: 225 LWVLREYDQVEPIILSGGTLGPXSIREAAEAVVEAMDFHGEVIFDTTKSDGQFKK 279
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 116 (45.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 64/267 (23%), Positives = 112/267 (41%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVD-NYFTGK--KDNLIHHFGNPRFELIRHDV 172
+++LVTGG GF+G L RL + G V N GK + N I P + R V
Sbjct: 1 MKMLVTGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLED--RERV 58
Query: 173 VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTSE 231
++ + + D I+H +SP K+ NV+GT +++ +++ G + L+ ST
Sbjct: 59 LQ-VCKDKDYIFHSGAHSSPWG-KYEDF--YNANVLGTKHIIEGSQKYGIKRLIHVSTPS 114
Query: 232 VYGDPLQHPQAETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYG 290
+Y + + + N P + Y K AE +D G+ R +G
Sbjct: 115 IY---FYYDERQNVVENAKLPDTFVNHYATTKYMAEQ-AIDQAFAHGLPVITIRPRALFG 170
Query: 291 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGD-H-VGP- 347
P D ++ + + K L G +V ++V+ L+ M H +G
Sbjct: 171 P----GDNAILPRLI-KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQK 225
Query: 348 FNLGNPGEFTMLELAEVVQEIIDRNAR 374
+N+ N + E+ E V + +D+ R
Sbjct: 226 YNITNDERINLYEVIENVMKRLDKEVR 252
Score = 53 (23.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 392 ITKAKQLLGWEPRVTLRKGLPLMV 415
I KAK+ LG+ P+V++ +G+ V
Sbjct: 299 IDKAKEELGYAPKVSIEEGITKFV 322
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 115 (45.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 71/287 (24%), Positives = 117/287 (40%)
Query: 96 AEVQHVNAGGKVPLGLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKK 153
A + G +G RK I +TG G ++ L+++ + V ++ TG+
Sbjct: 6 ASCRRYPGSGDGEMGKLRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI 65
Query: 154 DNLI-----HHFGNPRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-T 202
++L H GN + +L + I+ EV +IY+L S V F+ + T
Sbjct: 66 EHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYT 124
Query: 203 IKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCY 258
+ VGTL +L K G +F STSE+YG + PQ ET P RS Y
Sbjct: 125 ADVDGVGTLRLLDAIKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPY 179
Query: 259 DEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTV 316
K A + +++ + A +FN PR + R +S VA+ L +
Sbjct: 180 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFS 239
Query: 317 YGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
G+ R + D VE + +++ D F + ++ E E
Sbjct: 240 LGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 286
Score = 54 (24.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D +KA+Q L W+PRV + + MV AD
Sbjct: 324 YRP-TEVD--FLQGDCSKAQQKLNWKPRVAFDELVREMVQAD 362
>TAIR|locus:2123797 [details] [associations]
symbol:SQD1 "sulfoquinovosyldiacylglycerol 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0008146 "sulfotransferase
activity" evidence=IDA] [GO:0009247 "glycolipid biosynthetic
process" evidence=IDA] [GO:0046506 "sulfolipid biosynthetic
process" evidence=IDA] [GO:0046507 "UDPsulfoquinovose synthase
activity" evidence=IDA] [GO:0016036 "cellular response to phosphate
starvation" evidence=IEP;IMP;RCA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0008270 GO:GO:0009247 GO:GO:0016036 EMBL:AL031804
EMBL:AL161582 GO:GO:0008146 EMBL:AF022082 EMBL:AF380641
EMBL:AY113071 IPI:IPI00524549 PIR:T05311 RefSeq:NP_195029.1
UniGene:At.2479 PDB:1I24 PDB:1I2B PDB:1I2C PDB:1QRR PDBsum:1I24
PDBsum:1I2B PDBsum:1I2C PDBsum:1QRR ProteinModelPortal:O48917
SMR:O48917 IntAct:O48917 STRING:O48917 PaxDb:O48917 PRIDE:O48917
ProMEX:O48917 EnsemblPlants:AT4G33030.1 GeneID:829440
KEGG:ath:AT4G33030 TAIR:At4g33030 HOGENOM:HOG000014371
InParanoid:O48917 KO:K06118 OMA:QMTETHR PhylomeDB:O48917
ProtClustDB:PLN02572 BioCyc:MetaCyc:MONOMER-1201
EvolutionaryTrace:O48917 Genevestigator:O48917 GermOnline:AT4G33030
GO:GO:0046507 Uniprot:O48917
Length = 477
Score = 102 (41.0 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 41/142 (28%), Positives = 61/142 (42%)
Query: 298 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-IRLMEGDHVGPFNLGNP--G 354
G ++ F QA PLTVYG G QTR + + D V+ + I + G F + N
Sbjct: 320 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 379
Query: 355 EFTMLELAEVVQEI-----IDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRV---T 406
+F++ ELA +V + +D P E + H TK +L G EP +
Sbjct: 380 QFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMEL-GLEPHYLSDS 438
Query: 407 LRKGLPLMVADFRHRIFGDQKE 428
L L F+ R+ D K+
Sbjct: 439 LLDSLLNFAVQFKDRV--DTKQ 458
Score = 57 (25.1 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 179 EVDQIYHL----ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS--TSEV 232
E D + H + P S + + V T NV+GTLN+L K G L T
Sbjct: 173 EPDSVVHFGEQRSAPYSMID-RSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE 231
Query: 233 YGDP 236
YG P
Sbjct: 232 YGTP 235
Score = 52 (23.4 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 114 KSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDN 147
K R++V GG G+ G L + V +VDN
Sbjct: 83 KPKRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 116
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK--DNL------IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G S +V+DN+ + D++ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFE 63
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ GT+ +L + + +G
Sbjct: 64 EMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMG 123
Query: 222 ARFLLTSTSE-VYGDPL 237
+ L+ S+S VYG P+
Sbjct: 124 VKSLVFSSSATVYGKPV 140
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 119 (46.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY---FTGK---KDNL--IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G +V+DN+ F G ++L + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETY 245
+ L+ S+S VYG+P P E +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 119 (46.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY---FTGK---KDNL--IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G +V+DN+ F G ++L + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETY 245
+ L+ S+S VYG+P P E +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH 148
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 114 (45.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 70/278 (25%), Positives = 115/278 (41%)
Query: 105 GKVPLGLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLI----- 157
G +G RK I +TG G ++ L+++ + V ++ TG+ ++L
Sbjct: 15 GDGEMGKLRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA 74
Query: 158 HHFGNPRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTL 211
H GN + +L + I+ EV +IY+L S V F+ + T + VGTL
Sbjct: 75 HIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTL 133
Query: 212 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAET 267
+L K G +F STSE+YG + PQ ET P RS Y K A
Sbjct: 134 RLLDAIKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYW 188
Query: 268 LTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRS 325
+ +++ + A +FN PR + R +S VA+ L + G+ R
Sbjct: 189 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 248
Query: 326 FQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
+ D VE + +++ D F + ++ E E
Sbjct: 249 WGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 286
Score = 54 (24.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D +KA+Q L W+PRV + + MV AD
Sbjct: 324 YRP-TEVD--FLQGDCSKAQQKLNWKPRVAFDELVREMVQAD 362
>GENEDB_PFALCIPARUM|PF08_0077 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase,
putative" species:5833 "Plasmodium falciparum" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 117 (46.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 64/269 (23%), Positives = 120/269 (44%)
Query: 116 LRI-LVTGGAGFVGSHLVDRLMDRG---DSVIVVDNYFTGKK-----DNLIHHFGNPRFE 166
+R+ L+ G G GS+L + L+++ VI + F K+ D LI H+G +
Sbjct: 1 MRVALIFGITGQDGSYLSELLLEKNYHVHGVIRRCSSFNTKRIDHIFDKLILHYG----D 56
Query: 167 LIRHDVVEPILLEV--DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNML-GL--AKRV 220
L+ + ++ E+ ++IY+LA S V F P T + +GTL +L G+ +K
Sbjct: 57 LLDSSNICSLICEIKPNEIYNLAAQ-SHVKVSFEMPEYTTEATALGTLRILEGIRISKVK 115
Query: 221 GARFLLTSTSEVYGD---PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG 277
+F STSE++G P+Q+ Y V+P + Y A +T++Y
Sbjct: 116 NIKFYNASTSELFGKVQCPIQNENTPFY--PVSPYAIAKLY------AHYITINYRESYN 167
Query: 278 IEARIARIFNTYGPRMCIDD-GRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEG 335
+ +FN PR R ++ +A+ +K E + G+ R + D V
Sbjct: 168 MFCINGILFNHESPRRGETFVTRKITRGIAKIQKKLETSIILGNIDTYRDWGHAKDYVYA 227
Query: 336 LIRLMEGDHVGPFNLGNPGEFTMLELAEV 364
+ +++ + F + + + ++ E E+
Sbjct: 228 MYLMLQQNEADDFVICSNEQHSVREFCEI 256
Score = 50 (22.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 391 DITKAKQLLGWEPRVT 406
D +KAK +L WEP T
Sbjct: 303 DCSKAKNILKWEPTYT 318
>UNIPROTKB|Q8IAX4 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 117 (46.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 64/269 (23%), Positives = 120/269 (44%)
Query: 116 LRI-LVTGGAGFVGSHLVDRLMDRG---DSVIVVDNYFTGKK-----DNLIHHFGNPRFE 166
+R+ L+ G G GS+L + L+++ VI + F K+ D LI H+G +
Sbjct: 1 MRVALIFGITGQDGSYLSELLLEKNYHVHGVIRRCSSFNTKRIDHIFDKLILHYG----D 56
Query: 167 LIRHDVVEPILLEV--DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNML-GL--AKRV 220
L+ + ++ E+ ++IY+LA S V F P T + +GTL +L G+ +K
Sbjct: 57 LLDSSNICSLICEIKPNEIYNLAAQ-SHVKVSFEMPEYTTEATALGTLRILEGIRISKVK 115
Query: 221 GARFLLTSTSEVYGD---PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG 277
+F STSE++G P+Q+ Y V+P + Y A +T++Y
Sbjct: 116 NIKFYNASTSELFGKVQCPIQNENTPFY--PVSPYAIAKLY------AHYITINYRESYN 167
Query: 278 IEARIARIFNTYGPRMCIDD-GRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEG 335
+ +FN PR R ++ +A+ +K E + G+ R + D V
Sbjct: 168 MFCINGILFNHESPRRGETFVTRKITRGIAKIQKKLETSIILGNIDTYRDWGHAKDYVYA 227
Query: 336 LIRLMEGDHVGPFNLGNPGEFTMLELAEV 364
+ +++ + F + + + ++ E E+
Sbjct: 228 MYLMLQQNEADDFVICSNEQHSVREFCEI 256
Score = 50 (22.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 391 DITKAKQLLGWEPRVT 406
D +KAK +L WEP T
Sbjct: 303 DCSKAKNILKWEPTYT 318
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 125 (49.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 53/208 (25%), Positives = 92/208 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK------DNL--IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G S +V+DN+ + ++L + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSVEFE 63
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ GT+ +L + + G
Sbjct: 64 EMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-LGI 278
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKAW 178
Query: 279 EARIARIFNTYGPRM--CI-DDGRVVSN 303
A + R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPIGAHASGCIGEDPQGIPN 206
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 117 (46.2 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 51/202 (25%), Positives = 87/202 (43%)
Query: 177 LLEVDQIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAKRVG----ARFLLTSTSE 231
+++ +IY+LA S V F+ + T + + VGTL +L + G RF STSE
Sbjct: 122 MVKPTEIYNLAAQ-SHVKVSFDLSEYTAEVDAVGTLRILDAIRTCGMEKNVRFYQASTSE 180
Query: 232 VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGP 291
+YG ++ PQ E P RS Y K + ++Y + A +FN P
Sbjct: 181 LYGKVVETPQNEQ-----TPFYPRSPYACAKMYGFWIVINYREAYNMYACNGILFNHESP 235
Query: 292 RMCIDD-GRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFN 349
R + R ++ VA+ K+ G+ R + SD VE + +++ + +
Sbjct: 236 RRGENFVTRKITRSVAKIYHKQMEYFELGNLDSKRDWGHASDYVEAMWMMLQRESPSDYV 295
Query: 350 LGNPGEFTMLELAEVVQEIIDR 371
+ ++ E E + IDR
Sbjct: 296 IATGETHSVREFVEAAFKHIDR 317
Score = 51 (23.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVT 406
FRP TE D + D +KA + L W P+VT
Sbjct: 347 FRP-TEVD--LLQGDASKANRELNWTPKVT 373
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 75/296 (25%), Positives = 127/296 (42%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
R L+TG GF G ++ D L G + + +++ +R VVE +
Sbjct: 9 RALITGLEGFTGRYVADELRRSGYEIFGTRHSGADEREAGCFRVDICDLAALRR-VVEEV 67
Query: 177 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLA--KRVGARFLLTSTSEVY 233
EV + HLA + H + + + + NVVGT N+L LA R LL S++ VY
Sbjct: 68 EPEV--VVHLAAISFVAHGEADAI--YRANVVGTRNLLEALAGLSRTPRAVLLASSANVY 123
Query: 234 GDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRM 293
G+ P E +V+ + + Y K E + + L I IAR FN G
Sbjct: 124 GNA---P-VELIDESVS-LAPANDYAVSKLAMEYMARLWMHRLPIV--IARPFNYTGVGQ 176
Query: 294 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNP 353
++ V+ R+ + G+ R F V + +RL+E G + N
Sbjct: 177 A--SHFLIPKIVSHFQRRASVIELGNLDVERDFSDVRVVALAYVRLLEVVPAG--QVVNV 232
Query: 354 GEFTMLELAEVVQEIIDRNAR-IEFRPNTE----DDPHKRKPDITKAKQLLG-WEP 403
G ++ L EV+ + + IE R N E ++ + + D+++ K+L+G ++P
Sbjct: 233 GSGQVVSLREVLAMMSGISGHEIEVRVNPEFVRANEVKRLQGDVSRLKELIGGYQP 288
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 106 (42.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 118 ILVTGGAGFVGSHLVDRLMD---RGDSVIV--------VDNYFTGKKDNLIHHFGNPRFE 166
+L+ GG+GF+G HL+ + D + D I + FT D++ H G +
Sbjct: 7 VLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVDDIKFHKG----D 62
Query: 167 LIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
L D +E + E + C ASP+H + NP NV GT N++ + K+ G L+
Sbjct: 63 LTSPDDMENAINESKANVVVHC-ASPMHGQ-NPDIYDIVNVKGTRNVIDMCKKCGVNILV 120
Query: 227 -TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTM 270
TS++ V + A+ W P Y+E K AE + +
Sbjct: 121 YTSSAGVIFNGQDVHNADETWPI--PEVPMDAYNETKAIAEDMVL 163
Score = 61 (26.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 388 RKPDITKAKQLLGWEPRVTLRKGL 411
R +I KAK+LLG+ PRV + +G+
Sbjct: 315 RYHNIAKAKKLLGYTPRVGIEEGI 338
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 68/301 (22%), Positives = 118/301 (39%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPI 176
++LVTGG G VG L + ++ +F G KD + + + R +P
Sbjct: 3 KVLVTGGTGLVGKALEAVIKEQSPED--EQWFFAGSKDADLTNLAATQALFARE---KPT 57
Query: 177 LLEVDQIYHLACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYG 234
+ HLA + H N + ++ N++ N+L A G +++ S ++
Sbjct: 58 -----HVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFP 112
Query: 235 DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLG-IEARI--ARIF---NT 288
D +P ET N P Y KR + YH G + + IF +
Sbjct: 113 DKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDN 172
Query: 289 YGPRMC-IDDGRV--VSNFVAQAL----RKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME 341
Y P + + G + + V + + TV+G G R F + DL E +I ++
Sbjct: 173 YNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLR 232
Query: 342 G-DHVGPFNLG--NPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQL 398
+ V P L E T+ E+A+ V + + N R+ + D +K+ K +
Sbjct: 233 NYESVEPIILSADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSF 292
Query: 399 L 399
L
Sbjct: 293 L 293
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 67/277 (24%), Positives = 122/277 (44%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSV-----IVVDNYFTGKKDNLIHHFGNPRFELIRH 170
+ ILVTG AGF+G L+ L++RG + T + + +PR ++
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGSLTDRHGQLHPIQRITAFDRDPVQGLDDPRVQVKGG 60
Query: 171 DVVEPILLE--VDQ----IYHLACP-ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA- 222
D+ +P +L +D I+HLA +S F+ ++ N T +L A+++G
Sbjct: 61 DITDPQVLANLIDANTQGIFHLAAVVSSQAESDFD--LGMRVNFSATQGLLERARQLGTC 118
Query: 223 -RFLLTSTSEVYGDPLQHPQAETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEA 280
++++TS+ V+G L + W +P +S Y K + L DY R ++
Sbjct: 119 PKWVMTSSVAVFGGQLPDTVGDDQVW---SP---QSSYGTQKAMNDLLLADYSRRGFVDG 172
Query: 281 RIARIFNTYGPRMCIDDGR---VVSNFVAQALRKEPL----TVYGDGKQTRSFQFVSDLV 333
R R+ P + + G+ S+F + +R EPL +V TR + +S
Sbjct: 173 RSLRM-----PTIVVRPGKPNLAASSFASGIIR-EPLNGQASVCPVPLNTRLW-LMSP-A 224
Query: 334 EGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIID 370
+ + L+ G + L M L++ V+++ID
Sbjct: 225 QAIANLVHGHELAAERLNQGRVINMPGLSQTVEQMID 261
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 113 (44.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 69/273 (25%), Positives = 114/273 (41%)
Query: 110 GLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLI---H-HF-GN 162
G RK I +TG G ++ L+++ + V ++ TG+ ++L H H GN
Sbjct: 31 GKSRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHIEGN 90
Query: 163 PRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGL 216
+ +L + I+ EV +IY+L S V F+ + T + +GTL +L
Sbjct: 91 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGLGTLRLLDA 149
Query: 217 AKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDY 272
K G +F STSE+YG + PQ ET P RS Y K A + +++
Sbjct: 150 TKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNF 204
Query: 273 HRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVS 330
+ A +FN PR + R +S VA+ L + G+ R +
Sbjct: 205 REAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMEFVSLGNLDAKRDWGHAK 264
Query: 331 DLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
D VE + +++ D F + ++ E E
Sbjct: 265 DYVEAMWLMLQTDEPEDFVISTGEVHSVREFVE 297
Score = 54 (24.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMV-AD 417
D +KAK LGW P+V+ + + MV AD
Sbjct: 346 DCSKAKNKLGWIPKVSFNELVKEMVEAD 373
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 124 (48.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 49/192 (25%), Positives = 80/192 (41%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKK------DNL--IHHFGNPRFELI 168
RILVTGGAG++GSH V +L + G +V+DN + ++L +
Sbjct: 8 RILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPIAFQ 67
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+ + L + H A + P++ N+ GT+ +L +
Sbjct: 68 ELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAMEAYS 127
Query: 222 AR-FLLTSTSEVYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-LGI 278
R + +S++ VYGDP P E + P+G + Y + K E + D + G
Sbjct: 128 VRNIVFSSSATVYGDPQYLPLDEKH-----PVGGCTNPYGKSKYFIEEMIQDLCKAEKGW 182
Query: 279 EARIARIFNTYG 290
A + R FN G
Sbjct: 183 NAILLRYFNPIG 194
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 68/263 (25%), Positives = 109/263 (41%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNYFTGKK-DNLIHHFGNPRFELIRHDVVEP 175
I+VTGGAG +GS+++ L +RG ++VVD+ G+K NL+ + R D +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADYMD--RDDFLAQ 59
Query: 176 ILLE-----VDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 229
I+ +D I+H AC A+ +++ + N + +L FL S+
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASS 116
Query: 230 SEVYGDPLQHPQAETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGLGIEARIARIFNT 288
+ YG+ + Y G +N G + +D R L H + R FN
Sbjct: 117 AATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVRRL-WLDAKQHDETLSQITGFRYFNV 175
Query: 289 YGPRMCIDDGRVVSNFVAQALRKE------PLTVYGDGKQTRSFQFVSDLVEGLIRLMEG 342
YGPR G + S VA L + P G R F +V D+ + ++
Sbjct: 176 YGPREQ-HKGSMAS--VAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLDH 232
Query: 343 DHVGPFNLGNPGEFTMLELAEVV 365
G FN G + E+A+ V
Sbjct: 233 GVSGIFNCGTGKAESFNEVAKAV 255
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 68/263 (25%), Positives = 109/263 (41%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRG-DSVIVVDNYFTGKK-DNLIHHFGNPRFELIRHDVVEP 175
I+VTGGAG +GS+++ L +RG ++VVD+ G+K NL+ + R D +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADYMD--RDDFLAQ 59
Query: 176 ILLE-----VDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 229
I+ +D I+H AC A+ +++ + N + +L FL S+
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASS 116
Query: 230 SEVYGDPLQHPQAETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGLGIEARIARIFNT 288
+ YG+ + Y G +N G + +D R L H + R FN
Sbjct: 117 AATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVRRL-WLDAKQHDETLSQITGFRYFNV 175
Query: 289 YGPRMCIDDGRVVSNFVAQALRKE------PLTVYGDGKQTRSFQFVSDLVEGLIRLMEG 342
YGPR G + S VA L + P G R F +V D+ + ++
Sbjct: 176 YGPREQ-HKGSMAS--VAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLDH 232
Query: 343 DHVGPFNLGNPGEFTMLELAEVV 365
G FN G + E+A+ V
Sbjct: 233 GVSGIFNCGTGKAESFNEVAKAV 255
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 76/298 (25%), Positives = 125/298 (41%)
Query: 137 DRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYK 196
DR D + VD + K L H+G+ ++E + + +IY+L S V
Sbjct: 44 DRIDH-LYVDPHDLEAKLRL--HYGDLTDGTTLRRILEDV--KPTEIYNLGAQ-SHVRVS 97
Query: 197 FN-PVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQAETYWGNV 249
F+ P T+ + +GTL +L + R G RF +SE++G + PQ ET
Sbjct: 98 FDSPEYTVDSVAMGTLRLLEAIRDYQHRTGIQVRFYQAGSSEMFGKVQEIPQKET----- 152
Query: 250 NPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA 308
P RS Y K T++Y + A +FN PR R ++ +A+
Sbjct: 153 TPFYPRSPYACAKVYGHWQTVNYRESYDLFACNGILFNHESPRRGETFVTRKITRAIARI 212
Query: 309 LRKEPLTVY-GDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQE 367
+ +Y G+ R + + D V + +++ + + + + E E+
Sbjct: 213 VAGTQKKLYLGNIDSKRDWGYAKDYVRAMWAMLQQEQPDDYVVATGETHEVKEFLEIAFG 272
Query: 368 IIDRNAR--IEF-----RPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
++ N + + F RP E D P TKA+ LGWEP VT + + LMV AD
Sbjct: 273 YVNLNWQNYVAFDERYLRP-AEVDLLIGDPAKTKAQ--LGWEPSVTFTELVHLMVEAD 327
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 112 (44.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 69/273 (25%), Positives = 113/273 (41%)
Query: 110 GLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLI-----HHFGN 162
G RK I +TG G ++ L+++ + V ++ TG+ ++L H GN
Sbjct: 20 GKPRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 79
Query: 163 PRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGL 216
+ +L + I+ EV +IY+L S V F+ + T + VGTL +L
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDA 138
Query: 217 AKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDY 272
K G +F STSE+YG + PQ ET P RS Y K A + +++
Sbjct: 139 IKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNF 193
Query: 273 HRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVS 330
+ A +FN PR + R +S VA+ L + G+ R +
Sbjct: 194 REAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK 253
Query: 331 DLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
D VE + +++ D F + ++ E E
Sbjct: 254 DYVEAMWLMLQNDEPEDFVIATGEVHSVREFVE 286
Score = 54 (24.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV-AD 417
+RP TE D + D +KA+Q L W+PRV + + MV AD
Sbjct: 324 YRP-TEVD--FLQGDCSKAQQKLNWKPRVAFDELVREMVQAD 362
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 119 (46.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 72/277 (25%), Positives = 114/277 (41%)
Query: 104 GGKVPLGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNP 163
G K+P + ++++ILVTG G++G+ L L+ RG SV + T +L P
Sbjct: 2 GPKMP-NTETENMKILVTGSTGYLGARLCHVLLRRGHSVRALVRR-TSDLSDL-----PP 54
Query: 164 RFELIRHDVVEPILLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 218
EL DV + L D ++H A P + +P + I NV G N+L K
Sbjct: 55 EVELAYGDVTDYRSLTDACSGCDIVFHAAALVEP--WLPDPSRFISVNVGGLKNVLEAVK 112
Query: 219 RVGA--RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGL 276
+ + TS+ G E N Y+ K A+ + ++
Sbjct: 113 ETKTVQKIIYTSSFFALGSTDGSVANENQVHNERFFCTE--YERSKAVADKMALNA-ASE 169
Query: 277 GIEARIARIFNTYGPRMCIDDGRVVS-NFVAQALRKE---PLTVY-GDGKQTRSFQFVSD 331
G+ I Y P + G++ S N VA+ L + L Y G G SF V D
Sbjct: 170 GVP-----IILLY-PGVIFGPGKLTSANMVARMLIERFNGRLPGYIGSGTDRYSFSHVDD 223
Query: 332 LVEGLIRLMEGDHVGPFNL--GNPGEFTML-ELAEVV 365
+VEG + ME +G L G F ++ ++A ++
Sbjct: 224 VVEGHVAAMEKGRLGERYLLTGENASFKLVFDMAALI 260
Score = 45 (20.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 386 HKRKPDITKAKQLLGWEPRVTLRKGLPLMV 415
H+ KAK LG+ PR +L++GL M+
Sbjct: 305 HQWSYSCDKAKLELGYNPR-SLKEGLEEML 333
>UNIPROTKB|E9PP14 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI01012947
ProteinModelPortal:E9PP14 SMR:E9PP14 Ensembl:ENST00000533817
ArrayExpress:E9PP14 Bgee:E9PP14 Uniprot:E9PP14
Length = 198
Score = 117 (46.2 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 54/202 (26%), Positives = 85/202 (42%)
Query: 109 LGLQRKSLRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
+G + S+RILVTGG+G VG + +++ G + D F KD + R L
Sbjct: 1 MGEPQGSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTR-ALF 58
Query: 169 RHDVVEPILLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 226
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 --EKVQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVV 110
Query: 227 TSTSE-VYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARI 285
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIP 170
Query: 286 FNTYGPR--MCIDDGRVVSNFV 305
N +GP I+DG V+ +
Sbjct: 171 TNVFGPHDNFNIEDGHVLPGLI 192
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 84 (34.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDN 147
ILVTGG GF+GSH L+ +V+V+DN
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDN 78
Score = 66 (28.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/96 (21%), Positives = 40/96 (41%)
Query: 319 DGKQTRSFQFVSDLVEGLIRLMEG-------DHVGPFNLGNPGEFTMLELAEVVQEIIDR 371
DG R F V+DL G I ++ ++ FNLG ++ E+ + ++ + +
Sbjct: 315 DGTAVRDFIHVTDLARGHIAALDAANERKLAENFRAFNLGTGRGHSVKEVVDAMESVSRK 374
Query: 372 NARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 407
+ P D T+++Q L W+ +L
Sbjct: 375 QIPVRAAPRRPGDVGSCVAVATRSQQELRWKTEKSL 410
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 179 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYG 234
++ + H A + NP+K NV G ++ + G + F+ +S++ VYG
Sbjct: 140 KISGVIHFAAYKAVEESIKNPLKYYANNVSGLIDFASTLGKYGIKTFIFSSSATVYG 196
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNY---FTGK---KDNL--IHHFGNPRFELI 168
++LVTGGAG++GSH V L++ G +V+DN+ F G ++L + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 169 RHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 221
D+++ L+ + H A + P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 222 ARFLLTSTSE-VYGDPLQHPQAETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGLGI- 278
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 279 EARIARIFNTYGPRM--CI-DDGRVVSN 303
A + R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPN 206
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 76/318 (23%), Positives = 130/318 (40%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEP 175
++IL+TG G VG ++++ L + + + K NL+ + L+ H +P
Sbjct: 1 MKILLTGANGMVGKNILE-LASKHQHTFLTPS---SKVLNLLDAASTQAY-LVEH---KP 52
Query: 176 ILLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVY 233
D I H A + +PVK + N+ LN+L AK G + FL S+S +Y
Sbjct: 53 -----DMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMY 107
Query: 234 GDPLQHPQAETYW--GNVNPIGVRSCYDEGKRTAETLTMDY--HRGLGIEARIARIFNTY 289
+P +E G + P Y K A T +Y H + + N Y
Sbjct: 108 PRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPCNLY 164
Query: 290 G--PRMCIDDGRVVSNFVAQAL--RKEPLT---VYGDGKQTRSFQFVSDLVEGLIRLMEG 342
G + + ++ + + + +++ LT ++GDGK R F + DL + + +
Sbjct: 165 GRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYAIAN 224
Query: 343 DHVGPFNLG-NPGE-FTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLG 400
P NL GE FT+ + + + EII + + T+ K+K G
Sbjct: 225 FSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFK-HDLTKPVGMKQKLIDDNKLNAFG 283
Query: 401 WEPRVTLRKGLPLMVADF 418
W + L +GL V F
Sbjct: 284 WSYKTDLTEGLKNTVQFF 301
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 76/318 (23%), Positives = 130/318 (40%)
Query: 116 LRILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEP 175
++IL+TG G VG ++++ L + + + K NL+ + L+ H +P
Sbjct: 1 MKILLTGANGMVGKNILE-LASKHQHTFLTPS---SKVLNLLDAASTQAY-LVEH---KP 52
Query: 176 ILLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVY 233
D I H A + +PVK + N+ LN+L AK G + FL S+S +Y
Sbjct: 53 -----DMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMY 107
Query: 234 GDPLQHPQAETYW--GNVNPIGVRSCYDEGKRTAETLTMDY--HRGLGIEARIARIFNTY 289
+P +E G + P Y K A T +Y H + + N Y
Sbjct: 108 PRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPCNLY 164
Query: 290 G--PRMCIDDGRVVSNFVAQAL--RKEPLT---VYGDGKQTRSFQFVSDLVEGLIRLMEG 342
G + + ++ + + + +++ LT ++GDGK R F + DL + + +
Sbjct: 165 GRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYAIAN 224
Query: 343 DHVGPFNLG-NPGE-FTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLG 400
P NL GE FT+ + + + EII + + T+ K+K G
Sbjct: 225 FSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFK-HDLTKPVGMKQKLIDDNKLNAFG 283
Query: 401 WEPRVTLRKGLPLMVADF 418
W + L +GL V F
Sbjct: 284 WSYKTDLTEGLKNTVQFF 301
>UNIPROTKB|Q3Z6W4 [details] [associations]
symbol:DET1324 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 102 (41.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSV-IVVDNYFTGKKDNLIHHFGNPRFELIRHDVVE- 174
R+ V+GG+GFVG HL+ RL + G + ++V N K+ P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMNEAEAKRVK------TPGVEFVYGTVNDL 57
Query: 175 PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 233
P+L+E + + + + K N+ GT NML A + G RF+
Sbjct: 58 PVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVKRFIHMGILGAS 117
Query: 234 GDP 236
DP
Sbjct: 118 ADP 120
Score = 60 (26.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 291 PRMCIDDGRVVSNFVAQALRKEPLT--VYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP- 347
P + G + ++ + PL V G+GK +V D+V L+++++G+ +
Sbjct: 147 PSVMFGQGAGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQS 206
Query: 348 FNLGNPGEFTMLE-LAEVVQEIIDRNARI 375
+G P FT E L V+Q + + R+
Sbjct: 207 VQIGGPRIFTYDEVLLAVMQAMGVKKPRL 235
>TIGR_CMR|DET_1324 [details] [associations]
symbol:DET_1324 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 102 (41.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 117 RILVTGGAGFVGSHLVDRLMDRGDSV-IVVDNYFTGKKDNLIHHFGNPRFELIRHDVVE- 174
R+ V+GG+GFVG HL+ RL + G + ++V N K+ P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMNEAEAKRVK------TPGVEFVYGTVNDL 57
Query: 175 PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 233
P+L+E + + + + K N+ GT NML A + G RF+
Sbjct: 58 PVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVKRFIHMGILGAS 117
Query: 234 GDP 236
DP
Sbjct: 118 ADP 120
Score = 60 (26.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 291 PRMCIDDGRVVSNFVAQALRKEPLT--VYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP- 347
P + G + ++ + PL V G+GK +V D+V L+++++G+ +
Sbjct: 147 PSVMFGQGAGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQS 206
Query: 348 FNLGNPGEFTMLE-LAEVVQEIIDRNARI 375
+G P FT E L V+Q + + R+
Sbjct: 207 VQIGGPRIFTYDEVLLAVMQAMGVKKPRL 235
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 105 (42.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 54/229 (23%), Positives = 88/229 (38%)
Query: 119 LVTGGAGFVGSHLVD----------RLMDRGDSVIVVDNYFTGKKDNLIHHFGNPRF--- 165
+VTGG GF HLV+ R+ D ++++ + TG I G ++
Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRS-GRVQYVSA 71
Query: 166 ELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 224
+L V + ++H+A P S ++ N NV GT N++ VG R
Sbjct: 72 DLRNKTQVVKGFQGAEVVFHMAAPDSSIN---NHQLQYSVNVQGTTNVIDACIEVGVKRL 128
Query: 225 LLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ TS+ V D + H P Y K E L + + G+ R
Sbjct: 129 IYTSSPSVVFDGV-HGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLTCCIR 187
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 333
+ +GP D +V + V A + + GDG F +V ++V
Sbjct: 188 PSSIFGP----GDKLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVV 232
Score = 60 (26.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 391 DITKAKQLLGWEPRVTLRKGLPLMVADFRH 420
D +KAK LG+ P V L++G+ + F H
Sbjct: 331 DSSKAKDRLGYSPVVPLQEGIKRTIDSFSH 360
>TIGR_CMR|SPO_0852 [details] [associations]
symbol:SPO_0852 "oxidoreductase, Gfo/Idh/MocA family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR000683 InterPro:IPR001509 Pfam:PF01370
Pfam:PF01408 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0050662 GO:GO:0016491
GO:GO:0044237 GO:GO:0055114 RefSeq:YP_166105.1
ProteinModelPortal:Q5LV50 GeneID:3195862 KEGG:sil:SPO0852
PATRIC:23374985 HOGENOM:HOG000138564 OMA:VHILTPP
ProtClustDB:CLSK767254 Uniprot:Q5LV50
Length = 699
Score = 120 (47.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 73/289 (25%), Positives = 107/289 (37%)
Query: 96 AEVQHVNAGGKVPLGLQRKSL-RILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKD 154
A ++ V+ VP RK +V GG GF+G L L+ RG V V+ G
Sbjct: 348 AVLERVDWPAPVPASPSRKPAPSAMVIGGTGFIGRALTRELVARGSDVRVISRGRQGSFA 407
Query: 155 NLIHHFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML 214
+L L + + + +D +Y+LA + + N V +
Sbjct: 408 DLPDQVETVSLSLRDTEGLARAMAGIDTVYNLARSTD------SSWEDCLQNDVAVAEGI 461
Query: 215 GLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNP--IGVRSCYDEGKRTAETLTMDY 272
G A L T + + P A P + R+ Y K E M
Sbjct: 462 GKAALAAGVRRLVYTGTIASFDMSDPAATITDATPLPDEMDERNLYARSKAECERRLMAL 521
Query: 273 HRGLGIEARIAR---IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 329
HR + IAR + GP GR A A+R ++G+G+ F +
Sbjct: 522 HRQSALPLVIARPGIVLGAGGPLQHWGIGRWHG---AGAVR-----LWGNGRNPLPFVLI 573
Query: 330 SDLVEGLIRLMEGDHV-G-PFNLGNPGEFTMLELAEVVQEIIDR-NARI 375
D V+GLIR E + + G FNL P +L + I DR ARI
Sbjct: 574 GDCVDGLIRCAEAEGIEGRAFNLVGP---PILSARDYFDAIHDRLGARI 619
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 378 RPNTED---DPHKRKPDITKAKQLLGWEP 403
RP+ D H+ + DI+ A+ LGW P
Sbjct: 651 RPSRADWLSRAHQSRFDISGARSALGWHP 679
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 113 (44.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 54/226 (23%), Positives = 96/226 (42%)
Query: 152 KKDNLIHHFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVK-TIKTNVVGT 210
+K++L H+G+ H +V + +IY+L S V F+ + T + +G
Sbjct: 59 EKESLTLHYGDLTDASNLHSIVSKV--NPTEIYNLGAQ-SHVKVSFDMSEYTGDVDGLGC 115
Query: 211 LNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAE 266
L +L + G ++ STSE+YG + PQ+ET P RS Y K+ A
Sbjct: 116 LRLLDAIRSCGMEKKVKYYQASTSELYGKVQEIPQSET-----TPFYPRSPYAVAKQYAY 170
Query: 267 TLTMDYHRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQ-ALRKEPLTVYGDGKQTR 324
+ ++Y + A +FN PR R ++ FVA A ++ + G+ R
Sbjct: 171 WIVVNYREAYDMYACNGILFNHESPRRGPTFVTRKITRFVAGIACGRDEILYLGNINAKR 230
Query: 325 SFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIID 370
+ D VE + +++ + F + ++ E E + ID
Sbjct: 231 DWGHARDYVEAMWLMLQQEKPEDFVIATGETHSVREFVEKSFKEID 276
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA-DFRHRIFGDQ 426
+RP TE D P+ KAK+LL W+ + + + + MVA D + GD+
Sbjct: 307 YRP-TEVDLLLGNPN--KAKKLLQWQIKTSFGELVKEMVAKDIEYIKNGDK 354
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 63/214 (29%), Positives = 94/214 (43%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMDRGD---SVIVVDNYFTGKKDNLIHHFGNPRFELI 168
Q + L LVTGG GF+G H+V L+ R + V D + + L G R I
Sbjct: 6 QAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEEL--KTGPVRVTAI 63
Query: 169 RHDV-----VEPILLEVDQIYHLACPASPVHYKFNPVKTI-KTNVVGTLNMLGLAKRVGA 222
+ DV V + + H A V + +P KTI + NV GT N++ + G
Sbjct: 64 QGDVTQAHEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGT 121
Query: 223 RFLL-TSTSEVYGDPLQ-HPQAETYWGNVN-PIGV--RSCYDEGKRTAETLTMDYHRGLG 277
RFL+ TS+ EV G + HP Y GN + P R Y K AE L ++ + G
Sbjct: 122 RFLVYTSSMEVVGPNTKGHP---FYRGNEDTPYEAVHRHPYPCSKALAEWLVLEAN-GRK 177
Query: 278 IEARIARIFNTYGPRMCIDDG-RVVSNFVAQALR 310
+ + + P +G +++ +F Q LR
Sbjct: 178 VRGGLPLVTCALRPTGIYGEGHQIMRDFYRQGLR 211
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 64/214 (29%), Positives = 98/214 (45%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMDRGD---SVIVVDNYFTGKKDNLIHHFGNPRFELI 168
Q +L LVTGG GF+G H+V L++R + V D + + + L G + I
Sbjct: 6 QVPTLVYLVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEEL--KAGPVQVTAI 63
Query: 169 RHDV-----VEPILLEVDQIYHLACPASPVHYKFNPVKTI-KTNVVGTLNMLGLAKRVGA 222
+ DV V + + H A V K +P KTI K NV GT N++ + G
Sbjct: 64 QGDVTQAHEVAAAMSGSHVVIHTAGLVD-VFGKASP-KTIHKVNVQGTQNVIDACVQTGT 121
Query: 223 RFLL-TSTSEVYGDPLQ-HPQAETYWGNVN-PI-GVRSC-YDEGKRTAETLTMDYHRGLG 277
++L+ TS+ EV G ++ HP Y GN + P V S Y K AE L ++ + G
Sbjct: 122 QYLVYTSSMEVVGPNIKGHP---FYRGNEDTPYEAVHSHPYPCSKALAEQLVLEAN-GRK 177
Query: 278 IEARIARIFNTYGPRMCIDDG-RVVSNFVAQALR 310
+ + + P +G +V+ +F Q LR
Sbjct: 178 VNGGLPLVTCALRPTGIYGEGHQVMRDFYYQGLR 211
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 111 (44.1 bits), Expect = 0.00028, P = 0.00028
Identities = 56/174 (32%), Positives = 78/174 (44%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMDRGD---SVIVVDNYFTGKKDNLIHHFGNPRFELI 168
Q + L LVTGG GF+G H+V L+ R + V D + + L G R I
Sbjct: 6 QAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEEL--KTGPVRVTAI 63
Query: 169 RHDV-----VEPILLEVDQIYHLACPASPVHYKFNPVKTI-KTNVVGTLNMLGLAKRVGA 222
+ DV V + + H A V + +P KTI + NV GT N++ + G
Sbjct: 64 QGDVTQAHEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGT 121
Query: 223 RFLL-TSTSEVYGDPLQ-HPQAETYWGNVN-PIGV--RSCYDEGKRTAETLTMD 271
RFL+ TS+ EV G + HP Y GN + P R Y K AE L ++
Sbjct: 122 RFLVYTSSMEVVGPNTKGHP---FYRGNEDTPYEAVHRHPYPCSKALAEWLVLE 172
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 109 (43.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 68/273 (24%), Positives = 113/273 (41%)
Query: 110 GLQRKSLRIL-VTGGAG-FVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLI-----HHFGN 162
G RK I +TG G ++ L+++ + V ++ TG+ ++L H GN
Sbjct: 17 GKPRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHTEGN 76
Query: 163 PRF---ELIRHDVVEPILLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGL 216
+ +L + I+ EV +IY+L S V F+ + T + +GTL +L
Sbjct: 77 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGLGTLRLLDA 135
Query: 217 AKRVG----ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDY 272
K G +F STSE+YG + PQ ET P RS Y K A + +++
Sbjct: 136 TKTCGLINTVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNF 190
Query: 273 HRGLGIEARIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVS 330
+ A +FN PR + R +S VA+ L + G+ R +
Sbjct: 191 REAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMESFSLGNLDAKRDWGHAK 250
Query: 331 DLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAE 363
D VE + +++ D F + ++ E E
Sbjct: 251 DYVEAMWLMLQTDEPEDFVISTGEVHSVREFVE 283
Score = 51 (23.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 377 FRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV 415
+RP TE D + D ++AK LGW P+V+ + + MV
Sbjct: 321 YRP-TEVD--FLQGDCSQAKNKLGWTPKVSFDELVKEMV 356
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 51/191 (26%), Positives = 81/191 (42%)
Query: 118 ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNL--IHHFGNPRFELIRHDV--- 172
ILVTGGAG++GSH V L++ G VI+VDN D + + + + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRDK 67
Query: 173 --VEPIL--LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 228
+ I ++ + H A + P++ N+ GT+ +L + + + ++ S
Sbjct: 68 EGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVFS 127
Query: 229 TSE-VYGDPLQHPQAETYWGNVNPIGVRSC-------YDEGKRTAETLTMDYHRGLGI-E 279
+S VYGD T + N+ PI SC Y + K E + D H
Sbjct: 128 SSATVYGDA-------TRFDNMIPIP-ESCPNDPTNPYGKTKYAIENIIKDLHTSDNTWR 179
Query: 280 ARIARIFNTYG 290
I R FN G
Sbjct: 180 GAILRYFNPIG 190
>FB|FBgn0036997 [details] [associations]
symbol:CG5955 species:7227 "Drosophila melanogaster"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF EMBL:AY058410
RefSeq:NP_649230.1 UniGene:Dm.4281 SMR:Q9VPE8 STRING:Q9VPE8
EnsemblMetazoa:FBtr0078197 GeneID:40268 KEGG:dme:Dmel_CG5955
UCSC:CG5955-RA FlyBase:FBgn0036997 InParanoid:Q9VPE8
OrthoDB:EOG4VT4CZ GenomeRNAi:40268 NextBio:817884 Uniprot:Q9VPE8
Length = 367
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 76/354 (21%), Positives = 149/354 (42%)
Query: 90 RVLYEAAEVQHVNAGGKVPLGLQRKSLRILVTGGAGFVGSHLVDRLMDR-GDSVIVVDNY 148
R+ A+++ A +VP + + +IL+TGG G +G L + G +++ +
Sbjct: 22 RITPIASQLVQRRAFHQVPR--ESRPPKILITGGLGQLGIECAKLLRTQYGSQNVILSDI 79
Query: 149 FTGKKDNLIHHFGNPRF-ELIRHDVVEPILLE--VDQIYHLACPASPVHYKFNPVKTIKT 205
K + G F +++ ++ I+++ +D + H + S V + P+ ++
Sbjct: 80 I--KPSQSVLENGPYIFADILDFKGLQKIVVDHRIDWLIHFSALLSAVGEQNVPL-AVRV 136
Query: 206 NVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTA 265
N+ G N++ LAK+ R + ST +G P P+ T NV R+ Y K A
Sbjct: 137 NIEGVHNVIELAKQYKLRIFVPSTIGAFG-P-DSPRNPT--PNVTIQRPRTIYGVSKVHA 192
Query: 266 ETLTMDYHRGLGIEARIAR---IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ 322
E + Y+ G++ R R + ++ P D V+ F +ALR T Y
Sbjct: 193 ELIGEYYYHKFGLDFRCLRFPGVISSDPPGGGTTD-YAVAVF-HEALRNGKYTCYLRPDT 250
Query: 323 TRSFQFVSDLVEGLIRLMEGDHVG----PFNLGNPGEFTMLEL-AEVVQEIIDRNARIEF 377
++ D + L+ M + +N+ FT EL A++ + + N + +
Sbjct: 251 RLPMMYIEDCLRALLEFMRAPNEQLKRRVYNV-TAMSFTPEELFAQLGKHV--PNLHVTY 307
Query: 378 RPNTED---DPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRIFGDQKE 428
+P++ D + D + A++ W+ + L + M+ D + Q E
Sbjct: 308 KPDSRQLIADAWPQVFDDSDARRDWHWQHKYDLSNLVDFMIKDVQDNYINVQPE 361
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 112 (44.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 52/225 (23%), Positives = 99/225 (44%)
Query: 119 LVTGGAGFVGSHLVDRLMDRGD-SVIVVDNYFTGKKDNLIHHFGNPRFELIRHDVVEPIL 177
LV GG GF+G ++V+ L+ RG+ +V V D + + D + H G+ R + + +E
Sbjct: 6 LVVGGCGFLGRYIVESLLARGEKNVHVFDIRKSFEDDRVTFHIGDIR----KTEDLESAC 61
Query: 178 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTSEVY--G 234
+ ++H A P + Y NV+GT ++ + G + L+ TS+S V G
Sbjct: 62 KGITTVFHTASPTHGMGYDIY----YSVNVIGTERLIEACIKCGVKQLVYTSSSSVVFNG 117
Query: 235 -DPLQHPQAETYWG-NVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPR 292
D + + Y +++P Y++ K E + +G + R +GPR
Sbjct: 118 KDIVNGDETLPYVDKHIDP------YNKTKELGERAVLKA-KGSNLLVCALRPAGIFGPR 170
Query: 293 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLI 337
+ + F+ A + ++GDG + ++ ++V I
Sbjct: 171 ----EVQGWPQFLKAAKEGKNKFMFGDGNNLCDWTYIDNVVHAHI 211
Score = 46 (21.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 391 DITKAKQLLGWEPRVTLRKGL 411
+I KAK+ L ++P V+LR G+
Sbjct: 302 NIEKAKKELKYKPIVSLRDGM 322
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 100 (40.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 114 KSLR-ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFG-NP-RFELIRH 170
+SL+ +L+ GG+GF+G HL+++ +V + + L +F +P + + +
Sbjct: 3 ESLQSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSKIQFFKG 62
Query: 171 DVVEPILLEVDQIYHLACP-----ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 225
D+ + D I C ASP+H + K NV GT N+L +A+++ + L
Sbjct: 63 DLTSDKDVS-DAINQSKCDVIVHSASPMHGLPQEIYE-KVNVQGTKNLLSVAQKLHVKAL 120
Query: 226 L-TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ TS++ V + A+ W P Y+E K AE M + + R
Sbjct: 121 VYTSSAGVIFNGQDVINADETWPY--PEVHMDGYNETKAAAEEAVMKANDNDQLRTVCLR 178
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE 334
+GP D ++V A A + GD + +V ++ +
Sbjct: 179 PAGIFGP----GDRQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVAD 224
Score = 59 (25.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 388 RKPDITKAKQLLGWEPRVTLRKGL 411
R +I KAK+LLG++P V L G+
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGI 339
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 100 (40.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 114 KSLR-ILVTGGAGFVGSHLVDRLMDRGDSVIVVDNYFTGKKDNLIHHFG-NP-RFELIRH 170
+SL+ +L+ GG+GF+G HL+++ +V + + L +F +P + + +
Sbjct: 3 ESLQSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSKIQFFKG 62
Query: 171 DVVEPILLEVDQIYHLACP-----ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 225
D+ + D I C ASP+H + K NV GT N+L +A+++ + L
Sbjct: 63 DLTSDKDVS-DAINQSKCDVIVHSASPMHGLPQEIYE-KVNVQGTKNLLSVAQKLHVKAL 120
Query: 226 L-TSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIAR 284
+ TS++ V + A+ W P Y+E K AE M + + R
Sbjct: 121 VYTSSAGVIFNGQDVINADETWPY--PEVHMDGYNETKAAAEEAVMKANDNDQLRTVCLR 178
Query: 285 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE 334
+GP D ++V A A + GD + +V ++ +
Sbjct: 179 PAGIFGP----GDRQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVAD 224
Score = 59 (25.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 388 RKPDITKAKQLLGWEPRVTLRKGL 411
R +I KAK+LLG++P V L G+
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGI 339
>RGD|628727 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IDA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IDA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:628727 GO:GO:0043231
GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558 EMBL:AB000199
IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 115 (45.5 bits), Expect = 0.00074, P = 0.00074
Identities = 62/208 (29%), Positives = 91/208 (43%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMD---RGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
Q +L LVTGG GF+G H+V L++ R + V D + + + L G + I
Sbjct: 6 QVPALVYLVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEEL--KTGPVQVTAI 63
Query: 169 RHDV-----VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 223
+ DV V + + H A V K +P K NV GT N++ + G R
Sbjct: 64 QGDVTQAHEVAAAMAGSHVVIHTAGLVD-VFGKASPETIHKVNVQGTQNVIDACVQTGTR 122
Query: 224 FLL-TSTSEVYGDPLQ-HPQAETYWGNVN-PIGV--RSCYDEGKRTAETLTMDYHRGLGI 278
L+ TS+ EV G ++ HP Y GN + P R Y K AE L ++ + G+
Sbjct: 123 LLVYTSSMEVVGPNVKGHP---FYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGL 179
Query: 279 EARIARIFNTYGPRMCIDDGRVVSNFVA 306
R+F P ++ GRV VA
Sbjct: 180 RFG-GRLFRAI-PAS-VEHGRVYVGNVA 204
>UNIPROTKB|O35048 [details] [associations]
symbol:Hsd3b7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:628727
GO:GO:0043231 GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0006694 CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558
EMBL:AB000199 IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 115 (45.5 bits), Expect = 0.00074, P = 0.00074
Identities = 62/208 (29%), Positives = 91/208 (43%)
Query: 112 QRKSLRILVTGGAGFVGSHLVDRLMD---RGDSVIVVDNYFTGKKDNLIHHFGNPRFELI 168
Q +L LVTGG GF+G H+V L++ R + V D + + + L G + I
Sbjct: 6 QVPALVYLVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEEL--KTGPVQVTAI 63
Query: 169 RHDV-----VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 223
+ DV V + + H A V K +P K NV GT N++ + G R
Sbjct: 64 QGDVTQAHEVAAAMAGSHVVIHTAGLVD-VFGKASPETIHKVNVQGTQNVIDACVQTGTR 122
Query: 224 FLL-TSTSEVYGDPLQ-HPQAETYWGNVN-PIGV--RSCYDEGKRTAETLTMDYHRGLGI 278
L+ TS+ EV G ++ HP Y GN + P R Y K AE L ++ + G+
Sbjct: 123 LLVYTSSMEVVGPNVKGHP---FYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGL 179
Query: 279 EARIARIFNTYGPRMCIDDGRVVSNFVA 306
R+F P ++ GRV VA
Sbjct: 180 RFG-GRLFRAI-PAS-VEHGRVYVGNVA 204
>WB|WBGene00017429 [details] [associations]
symbol:F13D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00390000002618 HOGENOM:HOG000167998 EMBL:FO081142
PIR:T16059 RefSeq:NP_508978.3 ProteinModelPortal:Q19391 SMR:Q19391
PaxDb:Q19391 EnsemblMetazoa:F13D11.4.1 EnsemblMetazoa:F13D11.4.2
GeneID:184416 KEGG:cel:CELE_F13D11.4 UCSC:F13D11.4.1 CTD:184416
WormBase:F13D11.4 InParanoid:Q19391 OMA:ESDNERI NextBio:924666
Uniprot:Q19391
Length = 343
Score = 115 (45.5 bits), Expect = 0.00077, P = 0.00076
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 111 LQRKSLRILVTGGAGFVGSHLVDRLMDRGDSV--IVVDNYFTGKKDNLIHHFGNPRFELI 168
+ ++LVTG +GF+G+H V+ L+ G V V D K + EL+
Sbjct: 1 MNNNETKVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLNNKAKVQPIKKLDKKNHLELV 60
Query: 169 RHDVVEPILLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGA 222
D+++ + D + H+A P P+ + + I T V GT+N+L +A+
Sbjct: 61 EADLLDSTCWKKAVAGCDYVLHVASPF-PI---VSDERCITTAVEGTMNVLKAIAEDGNV 116
Query: 223 RFL-LTSTSEVYGDPLQHPQA--ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIE 279
R L LTS+ + + E W N+ V CY + K AE D+ L +
Sbjct: 117 RKLVLTSSCAAVNEGYTQDRVFDEDSWSNLESDMV-DCYIKSKTLAEKAAWDFIERLPED 175
Query: 280 ARIAR-IFN---TYGPRMCIDDGRVVS 302
+ + N +GP + G ++
Sbjct: 176 KKFPMTVINPTLVFGPAYITEQGASIT 202
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 447 440 0.00089 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 236
No. of states in DFA: 606 (64 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.47u 0.15s 33.62t Elapsed: 00:00:02
Total cpu time: 33.52u 0.15s 33.67t Elapsed: 00:00:02
Start: Fri May 10 03:50:43 2013 End: Fri May 10 03:50:45 2013
WARNINGS ISSUED: 1