BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013227
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus
GN=Hgsnat PE=1 SV=2
Length = 656
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 192/427 (44%), Gaps = 69/427 (16%)
Query: 19 ISKSTSAPANEKLERDPLLPPSNSNSKQTRPQHQQRR-----LISLDVFRGLTVALMILV 73
ISK+ ++ ++L L PS ++ Q + RR L +D FRGL + LM+ V
Sbjct: 219 ISKTIASRETDRLINSELGSPSRADPLSADYQPETRRSSANRLRCVDTFRGLALVLMVFV 278
Query: 74 DDVGGILPAINHSPWNGLTLADFVMPFFLFIVGVSLALTYKNF----PCKVVATRKAILR 129
+ GG HS WNGLT+AD V P+F+FI+G S+ L+ + K+ K + R
Sbjct: 279 NYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQRGCSKLKLLGKIVWR 338
Query: 130 ALNLFLLGIFLQGGFFHGINNLKY---GVDIAQIRWMGVLQRIAIAYLVAALCE--IWLK 184
+ L +G+ I N Y + ++R GVLQR+ + Y V A+ E W
Sbjct: 339 SFLLICIGVI--------IVNPNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLEFFFWKP 390
Query: 185 GDGHVSSKLSLFR-----KYRGHWVVALVLTTLYLLLLYGLYVPDWQYEFPVETSSSSPW 239
+ + S F W+ L L +++L L + L VP T P
Sbjct: 391 VPDSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVPG------CPTGYLGP- 443
Query: 240 IFNVTCGVRGSTG--PACN--AVGMIDRKILGIQHLYRKPIYSRTKQCSINSPDYGPMPL 295
G G G P C A G IDR +LG HLY+ P + +
Sbjct: 444 ------GGIGDLGKYPHCTGGAAGYIDRLLLGDNHLYQHPSSTVLYHTEV---------- 487
Query: 296 DAPSWCQAPFDPEGLLSSVMATVTCLIGLHFGHLIVHFKDHRDRMLNWIILSSCLIGL-- 353
+DPEG+L ++ + V +G+ G ++V++KD +L C++GL
Sbjct: 488 --------AYDPEGVLGTINSIVMAFLGVQAGKILVYYKDQTKAILTRFAAWCCILGLIS 539
Query: 354 ----GLSLDFVGMHLNKALYSLSYTCLTAGASGVLLAGIYFMVDVQGHRRVTMVFEWMGL 409
+S + + +NK L+S+SY + + +L +Y +VDV+G T F + G+
Sbjct: 540 IVLTKVSANEGFIPINKNLWSISYVTTLSCFAFFILLILYPVVDVKGLWTGTPFF-YPGM 598
Query: 410 HALMIYI 416
+++++Y+
Sbjct: 599 NSILVYV 605
>sp|Q68CP4|HGNAT_HUMAN Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens
GN=HGSNAT PE=1 SV=2
Length = 663
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 200/453 (44%), Gaps = 78/453 (17%)
Query: 19 ISKSTSAPANEKLERDPLLPPSNSN--SKQTRPQHQQ-----RRLISLDVFRGLTVALMI 71
ISK+ S+ ++L L PS ++ +P + RL S+D FRG+ + LM+
Sbjct: 224 ISKAISSRETDRLINSELGSPSRTDPLDGDVQPATWRLSALPPRLRSVDTFRGIALILMV 283
Query: 72 LVDDVGGILPAINHSPWNGLTLADFVMPFFLFIVGVSLALTYKNF----PCKVVATRKAI 127
V+ GG H+ WNGLT+AD V P+F+FI+G S+ L+ + K K
Sbjct: 284 FVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQRGCSKFRLLGKIA 343
Query: 128 LRALNLFLLGIFLQGGFFHGINNLKY---GVDIAQIRWMGVLQRIAIAYLVAALCEIWLK 184
R+ L +GI I N Y + ++R GVLQR+ + Y V A+ E+
Sbjct: 344 WRSFLLICIGII--------IVNPNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLELLFA 395
Query: 185 G--DGHVSSKLSLFR-----KYRGHWVVALVLTTLYLLLLYGLYVPDWQYEFPVETSSSS 237
H +S+ S W++ LVL L+L L + L VP T
Sbjct: 396 KPVPEHCASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVPG------CPTGYLG 449
Query: 238 PWIFNVTCGVRGSTG--PACN--AVGMIDRKILGIQHLYRKPIYSRTKQCSINSPDYGPM 293
P G G G P C A G IDR +LG HLY+ P + +
Sbjct: 450 P-------GGIGDFGKYPNCTGGAAGYIDRLLLGDDHLYQHPSSAVLYHTEV-------- 494
Query: 294 PLDAPSWCQAPFDPEGLLSSVMATVTCLIGLHFGHLIVHFKDHRDRMLNWIILSSCLIGL 353
+DPEG+L ++ + V +G+ G +++++K +L C++GL
Sbjct: 495 ----------AYDPEGILGTINSIVMAFLGVQAGKILLYYKARTKDILIRFTAWCCILGL 544
Query: 354 -GLSLDFVGMH-----LNKALYSLSYTCLTAGASGVLLAGIYFMVDVQGHRRVTMVFEWM 407
++L V + +NK L+SLSY + + +L +Y +VDV+G T F +
Sbjct: 545 ISVALTKVSENEGFIPVNKNLWSLSYVTTLSSFAFFILLVLYPVVDVKGLWTGTPFF-YP 603
Query: 408 GLHALMIYI--LVACNILPVLLQGFYWRQPQNN 438
G++++++Y+ V N P F W+ N
Sbjct: 604 GMNSILVYVGHEVFENYFP-----FQWKLKDNQ 631
>sp|P57999|ZAN_RABIT Zonadhesin (Fragment) OS=Oryctolagus cuniculus GN=ZAN PE=2 SV=2
Length = 2282
Score = 35.8 bits (81), Expect = 0.70, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 242 NVTCGVRGSTGPACNAVGMIDR--KILGIQHLYRKPIYSRTKQCSINSPDYGPMPLDAPS 299
N C RGS P C A+ + + G+Q PI+ + C + P Y PS
Sbjct: 1627 NSLCEFRGSLQPLCKALQALGAACRSKGLQ----PPIWRNSSFCPLACPAYSTYTNCLPS 1682
Query: 300 WCQAPFDPEGLLSSVMATVTCLIG 323
+ FDP+G A +C G
Sbjct: 1683 CSPSCFDPDGRCEGARAPSSCAEG 1706
>sp|Q8W9L2|CYB_HETGU Cytochrome b OS=Heteromys gaumeri GN=MT-CYB PE=3 SV=1
Length = 379
Score = 32.0 bits (71), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 28 NEKLERDPLLPPSNSNSKQTRPQHQQRRLISLDVFRGLTVALMILVDDVGGILPAINHSP 87
+E +PL PSN + + P + + L+ + + GL +++++ D+ G N++P
Sbjct: 201 HETGSNNPLGIPSNCDKIPSHPYYTFKELLGVIMLLGLYLSIVLFFPDLLG--DPDNYTP 258
Query: 88 WNGLTLADFVMPFFLFIVGVSLALTYKNFPCKVVATRKAIL 128
N L + P + F+ ++ + N V+A +IL
Sbjct: 259 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSIL 299
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,820,177
Number of Sequences: 539616
Number of extensions: 7080601
Number of successful extensions: 19867
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 19853
Number of HSP's gapped (non-prelim): 11
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)