BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013234
(447 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LF5|A Chain A, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
pdb|3LF5|B Chain B, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
Length = 88
Score = 59.3 bits (142), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 8 ISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+++++LK HNK D WI ++G VYNV+ + ++HPGG+ L+ AG D T+ F H
Sbjct: 8 VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVH 63
>pdb|3KS0|A Chain A, Crystal Structure Of The Heme Domain Of Flavocytochrome
B2 In Complex With Fab B2b4
pdb|3KS0|B Chain B, Crystal Structure Of The Heme Domain Of Flavocytochrome
B2 In Complex With Fab B2b4
Length = 95
Score = 53.5 bits (127), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 4 SKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+K+ IS ++ HNKP D W+ + G VY++T + +HPGG + AG+DVT F H
Sbjct: 2 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLH 61
Query: 64 PGAAWQYLDKF 74
A +DK+
Sbjct: 62 ---APNVIDKY 69
>pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
Length = 511
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 4 SKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+K+ IS ++ HNKP D W+ + G VY++T + +HPGG + AG+DVT F H
Sbjct: 7 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLH 66
Query: 64 PGAAWQYLDKFFT 76
A +DK+
Sbjct: 67 ---APNVIDKYIA 76
>pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
Length = 506
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 4 SKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+K+ IS ++ HNKP D W+ + G VY++T + +HPGG + AG+DVT F H
Sbjct: 2 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLH 61
Query: 64 PGAAWQYLDKFFT 76
A +DK+
Sbjct: 62 ---APNVIDKYIA 71
>pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
Length = 511
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 4 SKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+K+ IS ++ HNKP D W+ + G VY++T + +HPGG + AG+DVT F H
Sbjct: 7 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLH 66
Query: 64 PGAAWQYLDKFFT 76
A +DK+
Sbjct: 67 ---APNVIDKYIA 76
>pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4
Angstroms Resolution
pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4
Angstroms Resolution
pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
Length = 511
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 4 SKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+K+ IS ++ HNKP D W+ + G VY++T + +HPGG + AG+DVT F H
Sbjct: 7 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLH 66
Query: 64 PGAAWQYLDKFFT 76
A +DK+
Sbjct: 67 ---APNVIDKYIA 76
>pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate
pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate
Length = 511
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 4 SKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+K+ IS ++ HNKP D W+ + G VY++T + +HPGG + AG+DVT F H
Sbjct: 7 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLH 66
Query: 64 PGAAWQYLDKFFT 76
A +DK+
Sbjct: 67 ---APNVIDKYIA 76
>pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate
Bound
pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate
Bound
pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound
pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound
Length = 511
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 4 SKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYH 63
+K+ IS ++ HNKP D W+ + G VY++T + +HPGG + AG+DVT F H
Sbjct: 7 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLH 66
Query: 64 PGAAWQYLDKFFT 76
A +DK+
Sbjct: 67 ---APNVIDKYIA 76
>pdb|3OZZ|B Chain B, Structure Of A Cytochrome B5 Core-Swap Mutant
Length = 82
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF--VAYH 63
K+ + ++++ HN W+ + KVY++T + HPGG+ LL AG D T++F V +
Sbjct: 3 KYYTLEEIQKHNNAKSTWMIIHYKVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHS 62
Query: 64 PGAAWQYLDKFFTG 77
P A + L F G
Sbjct: 63 PDAR-EMLKTFIIG 75
>pdb|1X3X|A Chain A, Crystal Structure Of Cytochrome B5 From Ascaris Suum
pdb|1X3X|B Chain B, Crystal Structure Of Cytochrome B5 From Ascaris Suum
Length = 82
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYHP 64
K +++++ HN DLWI G+V+++T + K HPGG + +L+ AGQD T P
Sbjct: 4 KKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGGKV-ILNKAGQDATSVLKTLAP 61
>pdb|3NER|A Chain A, Structure Of Human Type B Cytochrome B5
pdb|3NER|B Chain B, Structure Of Human Type B Cytochrome B5
Length = 92
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAY-HPGAAWQ 69
+++ N +LW+ + G+VY+VT + HPGG+ LL AG D +++F H A +
Sbjct: 15 EEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDARE 74
Query: 70 YLDKFFTG 77
L +++ G
Sbjct: 75 MLKQYYIG 82
>pdb|1B5M|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 84
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF--VAYHPGAAW 68
+++ N + W+ + G+VY++T + HPGG+ LL AG D T++F V + P A
Sbjct: 8 EEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAR- 66
Query: 69 QYLDKFFTG 77
+ L +++ G
Sbjct: 67 EMLKQYYIG 75
>pdb|3MUS|A Chain A, 2a Resolution Structure Of Rat Type B Cytochrome B5
pdb|3MUS|B Chain B, 2a Resolution Structure Of Rat Type B Cytochrome B5
Length = 87
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF--VAYHPGAAW 68
+++ N + W+ + G+VY++T + HPGG+ LL AG D T++F V + P A
Sbjct: 10 EEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAR- 68
Query: 69 QYLDKFFTG 77
+ L +++ G
Sbjct: 69 EMLKQYYIG 77
>pdb|1EUE|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1EUE|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 86
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF--VAYHPGAAW 68
+++ N + W+ + G+VY++T + HPGG+ LL AG D T++F + + P A
Sbjct: 10 EEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEILLEQAGADATESFEDIGHSPDAR- 68
Query: 69 QYLDKFFTG 77
+ L +++ G
Sbjct: 69 EMLKQYYIG 77
>pdb|1AWP|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1AWP|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 92
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAY-HPGAAWQ 69
+++ N + W+ + G+VY++T + HPGG+ LL AG D T++F H A +
Sbjct: 15 EEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEELLLEQAGADATESFEDLGHSPDARE 74
Query: 70 YLDKFFTG 77
L +++ G
Sbjct: 75 MLKQYYIG 82
>pdb|2M33|A Chain A, Solution Nmr Structure Of Full-length Oxidized
Microsomal Rabbit Cytochrome B5
Length = 104
Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + +++K HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 10 KYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 63
>pdb|1DO9|A Chain A, Solution Structure Of Oxidized Microsomal Rabbit
Cytochrome B5. Factors Determining The Heterogeneous
Binding Of The Heme
Length = 94
Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + +++K HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 5 KYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 58
>pdb|2I89|A Chain A, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|B Chain B, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|C Chain C, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|D Chain D, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
Length = 93
Score = 44.7 bits (104), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF--VAYHPGA 66
+++ HN W+ + G+VY++T + HPGG+ L AG D T++F V + P A
Sbjct: 16 EEVAKHNTSESTWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDA 73
>pdb|1ICC|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|C Chain C, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|D Chain D, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 87
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF--VAYHPGAAW 68
+++ N + W+ + G+VY++T + HPGG+ L AG D T++F V + P A
Sbjct: 10 EEVAKRNTSEETWMVIHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAR- 68
Query: 69 QYLDKFFTG 77
+ L +++ G
Sbjct: 69 EMLKQYYIG 77
>pdb|1M2M|A Chain A, Crystal Structure Of E44aE48AE56AD60A MUTANT OF
Cytochrome B5
Length = 82
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYHPG 65
K+ + ++++ HN W+ + KVY++T + + HPGG+ L + AG D T F A
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHS 62
Query: 66 AAWQYLDKFF 75
+ L K F
Sbjct: 63 TDARELSKTF 72
>pdb|1F03|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
pdb|1F04|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
Length = 82
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYHPG 65
K+ + ++++ HN W+ + KVY++T + + HPGG+ L + AG D T F A
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHS 62
Query: 66 AAWQYLDKFF 75
+ L K F
Sbjct: 63 TDARELSKTF 72
>pdb|1LQX|A Chain A, Crystal Structure Of V45e Mutant Of Cytochrome B5
Length = 82
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEELREQAGGDATENF 56
>pdb|1M20|A Chain A, Crystal Structure Of F35y Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKYLEEHPGGEEVLREQAGGDATENF 56
>pdb|2I96|A Chain A, Solution Structure Of The Oxidized Microsomal Human
Cytochrome B5
Length = 108
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 3 DSKKHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
++ K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 7 EAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 63
>pdb|1CXY|A Chain A, Structure And Characterization Of Ectothiorhodospira
Vacuolata Cytochrome B558, A Prokaryotic Homologue Of
Cytochrome B5
Length = 90
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 16 HNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAY-----HPGAAWQY 70
H+ P D W+++ GKVY++T + +HPG +L GQ+ T+A+ H A +
Sbjct: 18 HHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARL 77
Query: 71 LDKFFTGYYLEDYT 84
L ++ G LE+ T
Sbjct: 78 LQRYLIG-TLEEIT 90
>pdb|1I5U|A Chain A, Solution Structure Of Cytochrome B5 Triple Mutant
(E48aE56AD60A)
Length = 82
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYHPG 65
K+ + ++++ HN W+ + KVY++T + + HPGG+ L + AG D T F A
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLRAQAGGDATANFEAVGHS 62
Query: 66 AAWQYLDKFF 75
+ L K F
Sbjct: 63 TDARELSKTF 72
>pdb|1SH4|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V45h
Length = 82
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEHLREQAGGDATENF 56
>pdb|1J0Q|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V61h
Length = 82
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENF 56
>pdb|1ES1|A Chain A, Crystal Structure Of Val61his Mutant Of
Trypsin-Solubilized Fragment Of Cytochrome B5
Length = 82
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENF 56
>pdb|1CYO|A Chain A, Bovine Cytochrome B(5)
Length = 93
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 5 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENF 58
>pdb|1EHB|A Chain A, Crystal Structure Of Recombinant Trypsin-Solubilized
Fragment Of Cytochrome B5
pdb|1NX7|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5
Length = 82
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENF 56
>pdb|1HKO|A Chain A, Nmr Structure Of Bovine Cytochrome B5
Length = 104
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 9 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENF 62
>pdb|1LR6|A Chain A, Crystal Structure Of V45y Mutant Of Cytochrome B5
Length = 82
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEYLREQAGGDATENF 56
>pdb|1M2I|A Chain A, Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME B5
Length = 82
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLREQAGGDATANF 56
>pdb|1LJ0|A Chain A, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|B Chain B, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|C Chain C, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|D Chain D, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5
Length = 92
Score = 42.4 bits (98), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 11 QDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF--VAYHPGA 66
+++ N + W+ + G+VY++T + HPGG+ L AG D T++F V + P A
Sbjct: 15 EEVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDA 72
>pdb|1U9U|A Chain A, Crystal Structure Of F58y Mutant Of Cytochrome B5
Length = 82
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+ +
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENY 56
>pdb|1IB7|A Chain A, Solution Structure Of F35y Mutant Of Rat Ferro
Cytochrome B5, A Conformation, Ensemble Of 20
Structures
Length = 94
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ H W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 5 KYYTLEEIQKHKDSKSTWVILHHKVYDLTKYLEEHPGGEEVLREQAGGDATENF 58
>pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro
Cytochrome B5
Length = 94
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ H W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 5 KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 58
>pdb|1BFX|A Chain A, The Solution Nmr Structure Of The B Form Of Oxidized Rat
Microsomal Cytochrome B5, Minimized Average Structure
Length = 99
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ H W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 10 KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 63
>pdb|1BLV|A Chain A, Solution Structure Of Oxidized Rat Microsomal Cytochrome
B5 In The Presence Of 2 M Guanidinium Chloride:
Monitoring The Early Steps In Protein Unfolding
pdb|1AW3|A Chain A, The Solution Nmr Structure Of Oxidized Rat Microsomal
Cytochrome B5, Minimized Average Structure
pdb|1AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 19 Structures
pdb|1B5A|A Chain A, Rat Ferrocytochrome B5 A Conformation, Nmr, 1 Structure
pdb|1B5B|A Chain A, Rat Ferrocytochrome B5 B Conformation, Nmr, 1 Structure
Length = 94
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ H W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 5 KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 58
>pdb|1AQA|A Chain A, Solution Structure Of Reduced Microsomal Rat Cytochrome
B5, Nmr, Minimized Average Structure
pdb|1MNY|A Chain A, Dimethyl Propionate Ester Heme-Containing Cytochrome B5
pdb|2AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 21 Structures
Length = 94
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ H W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 5 KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 58
>pdb|1I87|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1I8C|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1IET|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, Minimized Average
Structure
pdb|1IEU|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, 10 Structures
Length = 98
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ H W+ + KVY++T + + HPGG+ L AG D T+ F
Sbjct: 9 KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 62
>pdb|1U9M|A Chain A, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|B Chain B, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|C Chain C, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|D Chain D, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|E Chain E, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|F Chain F, Crystal Structure Of F58w Mutant Of Cytochrome B5
Length = 82
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTD 57
K+ + ++++ HN W+ + KVY++T + + HPGG+ L AG D T+
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATE 54
>pdb|2IBJ|A Chain A, Structure Of House Fly Cytochrome B5
Length = 88
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ ++ ++ +N W + VY+VT + HPGG+ L+ AG+D T+ F
Sbjct: 7 KYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHF 60
>pdb|1M59|A Chain A, Crystal Structure Of P40v Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 6 KHISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAF 59
K+ + ++++ HN W+ + KVY++T + + H GG+ L AG D T+ F
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHVGGEEVLREQAGGDATENF 56
>pdb|2KEO|A Chain A, Solution Nmr Structure Of Human Protein Hs00059,
Cytochrome-B5-Like Domain Of The Herc2 E3 Ligase.
Northeast Structural Genomics Consortium (Nesg) Target
Ht98a
Length = 112
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 12 DLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYHPGAAWQYL 71
DL+ HN G W + GKVY++ D+ + L AG+D A AA Q+
Sbjct: 30 DLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFAGEDPVVAL-----EAALQFE 84
Query: 72 DK------FFTGYYLE 81
D F G YLE
Sbjct: 85 DTRESMHAFCVGQYLE 100
>pdb|1MJ4|A Chain A, Crystal Structure Analysis Of The Cytochrome B5 Domain
Of Human Sulfite Oxidase
Length = 82
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 7 HI-SQQDLKGHNKP-GDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAG 52
HI +++++ H P +W+++ +V++VT++ HPGG L+ AG
Sbjct: 5 HIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAG 52
>pdb|2IDB|A Chain A, Crystal Structure Of 3-Octaprenyl-4-Hydroxybenzoate
Decarboxylase (Ubid) From Escherichia Coli, Northeast
Structural Genomics Target Er459.
pdb|2IDB|B Chain B, Crystal Structure Of 3-Octaprenyl-4-Hydroxybenzoate
Decarboxylase (Ubid) From Escherichia Coli, Northeast
Structural Genomics Target Er459.
pdb|2IDB|C Chain C, Crystal Structure Of 3-Octaprenyl-4-Hydroxybenzoate
Decarboxylase (Ubid) From Escherichia Coli, Northeast
Structural Genomics Target Er459
Length = 505
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 8 ISQQDLKGHNKPGDLWISVQGKVYNVTDWTKHHPGGDLPLLSLAGQDVTDAFVAYHP 64
I +Q L G NK W+S +G + +W HPG P+ G D A P
Sbjct: 178 IYRQQLIGKNKLIXRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTP 234
>pdb|3HC2|A Chain A, Crystal Structure Of Chicken Sulfite Oxidase Mutant Tyr
322 Phe
Length = 466
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 4 SKKHISQQDLKGHNKPGD-LWISVQGKVYNVTDWTKHHPGGDLPLLSLAG 52
S +++++ H P + +W++ V++VTD+ + HPGG +L AG
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG 52
>pdb|1SOX|A Chain A, Sulfite Oxidase From Chicken Liver
pdb|1SOX|B Chain B, Sulfite Oxidase From Chicken Liver
Length = 466
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 4 SKKHISQQDLKGHNKPGD-LWISVQGKVYNVTDWTKHHPGGDLPLLSLAG 52
S +++++ H P + +W++ V++VTD+ + HPGG +L AG
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG 52
>pdb|3HBQ|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant Cys 185 Ala
Length = 466
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 4 SKKHISQQDLKGHNKPGD-LWISVQGKVYNVTDWTKHHPGGDLPLLSLAG 52
S +++++ H P + +W++ V++VTD+ + HPGG +L AG
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG 52
>pdb|3R19|A Chain A, Chicken Sulfite Oxidase Triple Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 4 SKKHISQQDLKGHNKPGD-LWISVQGKVYNVTDWTKHHPGGDLPLLSLAG 52
S +++++ H P + +W++ V++VTD+ + HPGG +L AG
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG 52
>pdb|3HBG|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant C185s
pdb|3HBP|A Chain A, The Crystal Structure Of C185s Mutant Of Recombinant
Sulfite Oxidase With Bound Substrate, Sulfite, At The
Active Site
Length = 466
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 4 SKKHISQQDLKGHNKPGD-LWISVQGKVYNVTDWTKHHPGGDLPLLSLAG 52
S +++++ H P + +W++ V++VTD+ + HPGG +L AG
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG 52
>pdb|3R18|A Chain A, Chicken Sulfite Oxidase Double Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 4 SKKHISQQDLKGHNKPGD-LWISVQGKVYNVTDWTKHHPGGDLPLLSLAG 52
S +++++ H P + +W++ V++VTD+ + HPGG +L AG
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG 52
>pdb|1XUV|A Chain A, X-Ray Crystal Structure Of Protein Mm0500 From
Methanosarcina Mazei. Northeast Structural Genomics
Consortium Target Mar10.
pdb|1XUV|B Chain B, X-Ray Crystal Structure Of Protein Mm0500 From
Methanosarcina Mazei. Northeast Structural Genomics
Consortium Target Mar10.
pdb|1XUV|C Chain C, X-Ray Crystal Structure Of Protein Mm0500 From
Methanosarcina Mazei. Northeast Structural Genomics
Consortium Target Mar10
Length = 178
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 56 TDAFVAYHP--GAAWQYLDKFFTGYYLEDYTVSEASKDYRKLVAEFSKMGLFEKKGHCAL 113
T A + P G +WQY+ K G + V+ + ++++ F GL E KGH L
Sbjct: 57 TTALKIFEPKNGGSWQYIQKDPEGNEYAFHGVNHDVTEPERIISTFEFEGLPE-KGHVIL 115
Query: 114 YTFVFMAM 121
T F A+
Sbjct: 116 DTARFEAL 123
>pdb|4IEL|A Chain A, Crystal Structure Of A Glutathione S-Transferase Family
Protein From Burkholderia Ambifaria, Target Efi-507141,
With Bound Glutathione
pdb|4IEL|B Chain B, Crystal Structure Of A Glutathione S-Transferase Family
Protein From Burkholderia Ambifaria, Target Efi-507141,
With Bound Glutathione
Length = 229
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 359 SSWMDWFHGGLQFQVEHHLFPRLPRCNLRKVSPFVVELCKKHNLPYN 405
SS +D L FQ H+ ++P N+RK V+ LC + NLP+
Sbjct: 8 SSGVDLGTENLYFQSMLHILGKIPSINVRK----VLWLCTELNLPFE 50
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.138 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,585,175
Number of Sequences: 62578
Number of extensions: 604524
Number of successful extensions: 1649
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1595
Number of HSP's gapped (non-prelim): 56
length of query: 447
length of database: 14,973,337
effective HSP length: 102
effective length of query: 345
effective length of database: 8,590,381
effective search space: 2963681445
effective search space used: 2963681445
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 53 (25.0 bits)