Query 013235
Match_columns 447
No_of_seqs 312 out of 2215
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 01:47:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013235.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013235hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1404 Alanine-glyoxylate ami 100.0 3.7E-99 8E-104 718.9 34.3 394 51-445 2-404 (442)
2 COG0160 GabT 4-aminobutyrate a 100.0 4.2E-92 9.2E-97 704.8 42.4 388 55-445 13-411 (447)
3 COG4992 ArgD Ornithine/acetylo 100.0 3.4E-90 7.4E-95 671.9 35.5 357 59-445 5-366 (404)
4 COG0161 BioA Adenosylmethionin 100.0 2E-80 4.4E-85 616.6 36.4 380 65-445 7-412 (449)
5 PRK05965 hypothetical protein; 100.0 1.4E-77 3.1E-82 618.3 40.5 383 61-445 4-415 (459)
6 PRK07678 aminotransferase; Val 100.0 2.9E-77 6.4E-82 615.1 40.8 385 59-445 6-411 (451)
7 PRK07482 hypothetical protein; 100.0 5.2E-77 1.1E-81 614.4 40.9 385 59-444 4-420 (461)
8 PRK06062 hypothetical protein; 100.0 1.8E-76 3.8E-81 608.9 40.2 384 60-444 13-413 (451)
9 PRK06938 diaminobutyrate--2-ox 100.0 7.7E-76 1.7E-80 605.2 42.0 384 59-444 23-425 (464)
10 PRK07481 hypothetical protein; 100.0 4.4E-76 9.6E-81 606.1 39.7 364 81-445 24-414 (449)
11 PRK07483 hypothetical protein; 100.0 1.1E-75 2.4E-80 601.7 39.7 364 80-444 11-397 (443)
12 PRK06931 diaminobutyrate--2-ox 100.0 2.2E-75 4.7E-80 601.6 40.9 382 60-444 19-419 (459)
13 PRK05639 4-aminobutyrate amino 100.0 4.4E-75 9.5E-80 598.5 40.9 386 55-445 10-409 (457)
14 TIGR03372 putres_am_tran putre 100.0 1.6E-75 3.4E-80 597.9 35.8 362 60-444 28-409 (442)
15 PRK08742 adenosylmethionine--8 100.0 9.4E-75 2E-79 597.3 41.8 385 58-445 18-436 (472)
16 PRK06916 adenosylmethionine--8 100.0 1.3E-74 2.8E-79 596.4 41.5 385 58-445 11-424 (460)
17 PRK07030 adenosylmethionine--8 100.0 1.2E-74 2.6E-79 596.6 40.7 361 82-445 30-415 (466)
18 PRK06943 adenosylmethionine--8 100.0 1.6E-74 3.5E-79 594.2 40.7 379 61-445 12-415 (453)
19 PRK07480 putative aminotransfe 100.0 1.8E-74 3.8E-79 594.4 40.0 383 61-445 8-417 (456)
20 KOG1403 Predicted alanine-glyo 100.0 2.9E-76 6.3E-81 543.3 23.2 380 59-445 6-403 (452)
21 PRK06058 4-aminobutyrate amino 100.0 5.1E-74 1.1E-78 591.0 42.6 384 55-445 14-408 (443)
22 PRK07036 hypothetical protein; 100.0 3.1E-74 6.8E-79 594.0 41.0 382 62-445 10-421 (466)
23 PRK06082 4-aminobutyrate amino 100.0 7.2E-74 1.6E-78 590.3 42.5 384 55-445 29-419 (459)
24 PRK06148 hypothetical protein; 100.0 3.4E-74 7.3E-79 639.7 42.8 383 59-445 584-976 (1013)
25 PRK06105 aminotransferase; Pro 100.0 7.7E-74 1.7E-78 590.7 40.7 382 62-445 7-418 (460)
26 PRK08593 4-aminobutyrate amino 100.0 2.8E-73 6.2E-78 584.6 41.7 385 59-445 3-397 (445)
27 PRK12403 putative aminotransfe 100.0 3.5E-73 7.6E-78 585.8 42.1 384 61-445 12-421 (460)
28 PRK11522 putrescine--2-oxoglut 100.0 1E-73 2.2E-78 588.2 37.9 363 61-445 36-417 (459)
29 PLN02760 4-aminobutyrate:pyruv 100.0 6E-73 1.3E-77 587.7 40.6 382 62-445 49-460 (504)
30 PRK06917 hypothetical protein; 100.0 8.9E-73 1.9E-77 580.8 40.2 362 82-445 15-398 (447)
31 TIGR00709 dat 2,4-diaminobutyr 100.0 9.5E-73 2.1E-77 581.0 38.9 363 81-445 21-401 (442)
32 PRK06541 hypothetical protein; 100.0 4.7E-72 1E-76 577.0 41.2 385 59-445 8-421 (460)
33 PRK05769 4-aminobutyrate amino 100.0 1.5E-71 3.4E-76 571.1 42.9 384 55-445 12-407 (441)
34 PRK07495 4-aminobutyrate amino 100.0 1.3E-71 2.9E-76 569.0 41.6 377 61-444 4-386 (425)
35 PRK06149 hypothetical protein; 100.0 1.5E-71 3.2E-76 618.5 43.2 386 57-445 543-936 (972)
36 KOG1402 Ornithine aminotransfe 100.0 4E-72 8.6E-77 522.0 29.3 362 58-445 21-395 (427)
37 PRK06918 4-aminobutyrate amino 100.0 2.5E-70 5.5E-75 565.0 42.7 389 54-445 11-409 (451)
38 PRK13360 omega amino acid--pyr 100.0 7.3E-71 1.6E-75 565.9 38.3 360 80-444 27-408 (442)
39 PRK08360 4-aminobutyrate amino 100.0 5.2E-70 1.1E-74 559.7 43.0 383 60-444 3-393 (443)
40 PF00202 Aminotran_3: Aminotra 100.0 1.1E-71 2.4E-76 554.5 29.4 329 84-416 1-338 (339)
41 PRK08117 4-aminobutyrate amino 100.0 4.1E-70 8.9E-75 561.5 41.8 382 59-444 4-394 (433)
42 PRK05630 adenosylmethionine--8 100.0 1.1E-70 2.3E-75 561.5 36.4 350 81-445 22-389 (422)
43 PRK12389 glutamate-1-semialdeh 100.0 8.8E-70 1.9E-74 557.1 40.3 376 58-445 4-397 (428)
44 PRK09221 beta alanine--pyruvat 100.0 5E-70 1.1E-74 560.2 38.1 360 80-444 30-411 (445)
45 PRK06173 adenosylmethionine--8 100.0 4.8E-70 1E-74 557.4 37.2 370 62-445 5-394 (429)
46 TIGR00699 GABAtrns_euk 4-amino 100.0 1.2E-69 2.6E-74 555.3 39.8 376 50-445 12-434 (464)
47 PRK06777 4-aminobutyrate amino 100.0 2.2E-69 4.7E-74 553.1 41.4 378 61-445 4-387 (421)
48 TIGR00700 GABAtrnsam 4-aminobu 100.0 1.3E-69 2.7E-74 555.5 39.6 365 79-445 13-386 (420)
49 PRK07986 adenosylmethionine--8 100.0 9.8E-70 2.1E-74 554.5 37.8 351 81-445 25-392 (428)
50 PRK09792 4-aminobutyrate trans 100.0 3E-69 6.4E-74 552.1 41.1 376 62-444 5-386 (421)
51 PLN02482 glutamate-1-semialdeh 100.0 6.7E-69 1.4E-73 553.0 40.2 375 57-445 50-443 (474)
52 KOG1401 Acetylornithine aminot 100.0 6.9E-69 1.5E-73 515.5 30.2 353 78-445 35-404 (433)
53 COG0001 HemL Glutamate-1-semia 100.0 1.2E-67 2.5E-72 519.2 36.9 379 57-446 4-399 (432)
54 PRK04013 argD acetylornithine/ 100.0 3.6E-68 7.8E-73 531.7 33.7 324 78-445 3-328 (364)
55 PRK04612 argD acetylornithine 100.0 2E-67 4.2E-72 535.7 38.1 342 80-445 21-371 (408)
56 PRK00615 glutamate-1-semialdeh 100.0 3.3E-67 7.1E-72 536.2 39.3 375 58-445 5-398 (433)
57 TIGR02407 ectoine_ectB diamino 100.0 1.9E-67 4.1E-72 537.4 37.1 349 81-444 17-377 (412)
58 PRK09264 diaminobutyrate--2-ox 100.0 2.8E-67 6.1E-72 538.4 36.3 350 81-445 21-382 (425)
59 PRK05964 adenosylmethionine--8 100.0 2E-66 4.3E-71 532.6 38.3 351 81-445 24-391 (423)
60 PRK07046 aminotransferase; Val 100.0 4.2E-66 9.1E-71 531.4 39.6 371 58-445 28-421 (453)
61 PLN02974 adenosylmethionine-8- 100.0 2.8E-66 6E-71 557.9 39.7 386 58-445 312-787 (817)
62 PRK08297 L-lysine aminotransfe 100.0 4.7E-66 1E-70 530.5 37.4 349 82-445 27-409 (443)
63 PLN00144 acetylornithine trans 100.0 6.4E-66 1.4E-70 521.4 34.0 332 85-445 1-347 (382)
64 TIGR03246 arg_catab_astC succi 100.0 2.1E-65 4.6E-70 521.0 37.9 339 80-444 16-362 (397)
65 PRK03715 argD acetylornithine 100.0 1.1E-65 2.4E-70 521.4 33.8 334 80-444 17-360 (395)
66 TIGR03251 LAT_fam L-lysine 6-t 100.0 1.3E-64 2.8E-69 519.1 35.7 366 62-445 3-402 (431)
67 PRK12381 bifunctional succinyl 100.0 1.1E-63 2.3E-68 510.0 36.5 339 80-444 20-366 (406)
68 PLN02624 ornithine-delta-amino 100.0 5.4E-63 1.2E-67 512.3 42.2 363 59-445 38-412 (474)
69 TIGR00508 bioA adenosylmethion 100.0 2.2E-63 4.8E-68 509.1 38.2 373 59-445 3-395 (427)
70 PRK00062 glutamate-1-semialdeh 100.0 4.2E-62 9.2E-67 500.6 37.3 377 58-445 2-394 (426)
71 TIGR00713 hemL glutamate-1-sem 100.0 6.1E-62 1.3E-66 500.1 37.7 375 60-445 2-392 (423)
72 PRK08088 4-aminobutyrate amino 100.0 8.7E-61 1.9E-65 491.2 42.4 378 61-444 5-388 (425)
73 PRK04073 rocD ornithine--oxo-a 100.0 2.2E-61 4.8E-66 491.7 37.0 351 59-444 3-364 (396)
74 PRK01278 argD acetylornithine 100.0 4.2E-60 9E-65 481.4 37.1 336 80-445 12-356 (389)
75 PRK06209 glutamate-1-semialdeh 100.0 2.2E-59 4.9E-64 480.4 37.8 361 61-444 2-379 (431)
76 PRK03244 argD acetylornithine 100.0 6.4E-58 1.4E-62 466.8 37.1 353 60-445 7-362 (398)
77 PRK05093 argD bifunctional N-s 100.0 7.8E-58 1.7E-62 466.7 37.6 340 80-445 21-368 (403)
78 TIGR01885 Orn_aminotrans ornit 100.0 2.1E-57 4.6E-62 463.3 38.0 358 61-445 2-370 (401)
79 PRK02936 argD acetylornithine 100.0 3.5E-57 7.6E-62 458.1 36.5 336 80-445 10-347 (377)
80 PRK00854 rocD ornithine--oxo-a 100.0 1.9E-55 4E-60 449.1 37.9 353 60-444 5-368 (401)
81 PTZ00125 ornithine aminotransf 100.0 8.6E-55 1.9E-59 444.0 37.1 342 79-445 11-363 (400)
82 PRK04260 acetylornithine amino 100.0 1.3E-54 2.7E-59 439.1 36.5 334 80-445 10-345 (375)
83 PRK02627 acetylornithine amino 100.0 2E-54 4.3E-59 440.6 37.7 353 60-445 3-362 (396)
84 cd00610 OAT_like Acetyl ornith 100.0 2E-53 4.4E-58 435.3 39.1 362 80-445 17-383 (413)
85 KOG1405 4-aminobutyrate aminot 100.0 1.2E-53 2.5E-58 401.4 25.9 386 38-444 20-450 (484)
86 TIGR00707 argD acetylornithine 100.0 2E-46 4.2E-51 379.6 35.6 335 80-445 8-349 (379)
87 PRK07505 hypothetical protein; 100.0 3.5E-36 7.5E-41 307.2 30.3 314 81-445 28-360 (402)
88 PLN02822 serine palmitoyltrans 100.0 3.5E-33 7.6E-38 289.9 30.7 324 83-445 94-436 (481)
89 PRK13393 5-aminolevulinate syn 100.0 5.4E-31 1.2E-35 269.3 29.7 297 97-445 43-357 (406)
90 TIGR01821 5aminolev_synth 5-am 100.0 1.9E-29 4.2E-34 257.5 31.2 300 96-445 42-357 (402)
91 PRK09064 5-aminolevulinate syn 100.0 3.8E-29 8.1E-34 255.8 30.2 297 98-445 45-358 (407)
92 PLN03227 serine palmitoyltrans 100.0 5.2E-29 1.1E-33 253.0 26.3 305 102-444 1-338 (392)
93 PRK05958 8-amino-7-oxononanoat 100.0 1.2E-27 2.7E-32 242.3 32.1 316 78-445 19-348 (385)
94 PRK07179 hypothetical protein; 100.0 1E-27 2.2E-32 245.2 30.3 301 78-443 41-357 (407)
95 COG0156 BioF 7-keto-8-aminopel 100.0 1.8E-26 3.8E-31 229.8 28.7 306 87-444 28-350 (388)
96 TIGR01825 gly_Cac_T_rel pyrido 100.0 2.9E-26 6.3E-31 232.6 30.0 313 79-444 14-341 (385)
97 PLN02955 8-amino-7-oxononanoat 99.9 1.6E-25 3.4E-30 227.8 29.1 297 97-445 100-422 (476)
98 PRK06939 2-amino-3-ketobutyrat 99.9 4.8E-25 1E-29 224.3 30.9 312 82-444 25-353 (397)
99 PRK13392 5-aminolevulinate syn 99.9 3.1E-25 6.8E-30 227.1 28.7 299 97-445 44-358 (410)
100 TIGR01822 2am3keto_CoA 2-amino 99.9 1.7E-24 3.7E-29 220.3 31.1 316 79-444 18-349 (393)
101 TIGR00858 bioF 8-amino-7-oxono 99.9 8E-24 1.7E-28 212.2 31.5 307 86-444 4-325 (360)
102 PRK03317 histidinol-phosphate 99.9 8.8E-23 1.9E-27 206.0 27.1 297 100-445 27-334 (368)
103 PRK05937 8-amino-7-oxononanoat 99.9 1.2E-21 2.5E-26 198.0 25.8 287 99-444 4-314 (370)
104 PRK03158 histidinol-phosphate 99.9 1.2E-21 2.5E-26 197.2 25.3 294 100-446 30-329 (359)
105 PLN02483 serine palmitoyltrans 99.9 5.7E-21 1.2E-25 199.1 30.8 304 96-444 97-426 (489)
106 PRK06225 aspartate aminotransf 99.9 5.9E-21 1.3E-25 193.6 26.3 308 97-445 26-339 (380)
107 PRK02731 histidinol-phosphate 99.9 5.3E-21 1.2E-25 192.9 25.6 298 97-445 30-333 (367)
108 COG0079 HisC Histidinol-phosph 99.9 8.6E-21 1.9E-25 189.2 25.7 292 100-445 23-320 (356)
109 KOG1360 5-aminolevulinate synt 99.9 7.4E-21 1.6E-25 182.6 23.4 295 100-444 172-484 (570)
110 PRK01533 histidinol-phosphate 99.9 6.3E-21 1.4E-25 192.3 22.6 297 97-445 27-327 (366)
111 KOG1359 Glycine C-acetyltransf 99.9 5.5E-20 1.2E-24 170.5 25.8 327 61-444 23-372 (417)
112 PRK08153 histidinol-phosphate 99.9 9.8E-21 2.1E-25 191.2 22.9 295 99-444 32-331 (369)
113 cd06454 KBL_like KBL_like; thi 99.9 5.4E-20 1.2E-24 183.8 27.8 297 99-445 1-312 (349)
114 PRK07682 hypothetical protein; 99.9 6E-20 1.3E-24 186.0 28.0 307 100-446 21-341 (378)
115 PRK14809 histidinol-phosphate 99.9 3.1E-20 6.7E-25 186.7 23.5 296 97-445 28-324 (357)
116 PRK06358 threonine-phosphate d 99.9 1.2E-19 2.7E-24 182.2 27.1 297 99-445 19-320 (354)
117 PRK06108 aspartate aminotransf 99.9 2E-19 4.4E-24 182.3 27.9 307 100-445 25-346 (382)
118 PRK07681 aspartate aminotransf 99.9 8.8E-20 1.9E-24 186.2 25.3 308 98-445 31-352 (399)
119 COG0436 Aspartate/tyrosine/aro 99.9 3.2E-19 7E-24 180.8 28.4 306 99-445 28-354 (393)
120 PRK07366 succinyldiaminopimela 99.9 3.2E-19 6.8E-24 181.4 26.9 313 97-446 28-355 (388)
121 cd00613 GDC-P Glycine cleavage 99.9 2.5E-19 5.4E-24 182.6 26.1 301 106-444 23-368 (398)
122 PRK00950 histidinol-phosphate 99.8 1.8E-19 4E-24 181.2 24.7 294 96-445 31-327 (361)
123 PRK07324 transaminase; Validat 99.8 1.1E-19 2.4E-24 183.8 22.9 311 94-446 21-337 (373)
124 PRK06207 aspartate aminotransf 99.8 6.6E-19 1.4E-23 180.1 28.6 312 98-445 38-366 (405)
125 PRK08960 hypothetical protein; 99.8 3.9E-19 8.4E-24 180.7 26.4 308 98-445 31-350 (387)
126 PRK02610 histidinol-phosphate 99.8 3E-19 6.5E-24 180.7 24.6 304 99-445 28-343 (374)
127 PRK08056 threonine-phosphate d 99.8 3.9E-19 8.4E-24 178.7 24.8 295 96-445 17-320 (356)
128 PRK07392 threonine-phosphate d 99.8 6.9E-19 1.5E-23 177.2 26.6 298 99-446 22-325 (360)
129 PRK08636 aspartate aminotransf 99.8 1.2E-18 2.5E-23 178.1 28.6 322 97-446 31-365 (403)
130 PRK09148 aminotransferase; Val 99.8 6.4E-19 1.4E-23 180.2 26.2 310 97-446 28-355 (405)
131 PRK08068 transaminase; Reviewe 99.8 1E-18 2.2E-23 177.8 27.2 307 97-445 30-353 (389)
132 PLN03026 histidinol-phosphate 99.8 4.6E-19 9.9E-24 179.7 24.6 292 97-445 50-349 (380)
133 PLN00175 aminotransferase fami 99.8 1.5E-18 3.2E-23 177.8 28.5 304 100-445 55-374 (413)
134 PRK08361 aspartate aminotransf 99.8 6.4E-19 1.4E-23 179.3 25.5 310 99-445 33-354 (391)
135 TIGR01141 hisC histidinol-phos 99.8 4.4E-19 9.6E-24 177.4 23.9 292 99-445 19-317 (346)
136 PRK06348 aspartate aminotransf 99.8 1.3E-18 2.9E-23 176.6 27.6 304 100-445 30-349 (384)
137 TIGR01140 L_thr_O3P_dcar L-thr 99.8 4.8E-19 1E-23 176.2 23.4 280 99-445 17-300 (330)
138 PRK06290 aspartate aminotransf 99.8 1.2E-18 2.6E-23 178.2 26.6 310 97-444 42-368 (410)
139 TIGR03537 DapC succinyldiamino 99.8 1.8E-18 3.9E-23 173.4 27.4 303 100-445 1-317 (350)
140 cd00609 AAT_like Aspartate ami 99.8 4.8E-19 1E-23 176.2 22.3 296 111-445 8-318 (350)
141 PRK05764 aspartate aminotransf 99.8 1.9E-18 4.2E-23 175.9 25.9 309 98-445 30-357 (393)
142 TIGR03540 DapC_direct LL-diami 99.8 2.6E-18 5.6E-23 174.4 26.8 311 97-446 27-351 (383)
143 PRK05942 aspartate aminotransf 99.8 3.1E-18 6.7E-23 174.5 27.4 306 98-445 34-356 (394)
144 PRK03321 putative aminotransfe 99.8 1.3E-18 2.8E-23 174.6 23.7 294 100-445 23-322 (352)
145 TIGR01264 tyr_amTase_E tyrosin 99.8 2.1E-18 4.6E-23 176.1 25.4 310 98-445 30-365 (401)
146 PRK09276 LL-diaminopimelate am 99.8 2.8E-18 6E-23 174.3 25.9 305 98-446 30-353 (385)
147 PRK09147 succinyldiaminopimela 99.8 5E-18 1.1E-22 173.1 27.9 306 97-445 27-354 (396)
148 PTZ00433 tyrosine aminotransfe 99.8 2.6E-18 5.7E-23 176.1 25.9 322 92-445 26-374 (412)
149 PRK09105 putative aminotransfe 99.8 2.5E-18 5.3E-23 173.7 25.3 293 99-446 43-339 (370)
150 PRK09082 methionine aminotrans 99.8 3.2E-18 7E-23 173.9 25.9 307 99-445 30-351 (386)
151 PRK14808 histidinol-phosphate 99.8 2E-18 4.3E-23 172.1 23.9 294 87-444 7-308 (335)
152 PRK07777 aminotransferase; Val 99.8 7.9E-18 1.7E-22 171.1 28.1 306 100-445 25-347 (387)
153 PRK15481 transcriptional regul 99.8 2.9E-18 6.2E-23 176.8 24.8 296 100-445 86-393 (431)
154 PRK12414 putative aminotransfe 99.8 7.6E-18 1.7E-22 171.1 27.4 307 100-445 30-349 (384)
155 PRK14807 histidinol-phosphate 99.8 6.8E-18 1.5E-22 169.4 25.9 292 100-445 23-318 (351)
156 TIGR03576 pyridox_MJ0158 pyrid 99.8 5.1E-18 1.1E-22 169.6 24.4 271 116-446 34-310 (346)
157 PF00155 Aminotran_1_2: Aminot 99.8 3E-18 6.6E-23 172.3 22.7 309 100-445 2-334 (363)
158 COG1167 ARO8 Transcriptional r 99.8 3E-18 6.5E-23 177.3 23.0 311 96-445 86-415 (459)
159 PRK07309 aromatic amino acid a 99.8 1.7E-17 3.7E-22 168.9 28.3 307 99-445 30-352 (391)
160 PRK08175 aminotransferase; Val 99.8 1.4E-17 3E-22 169.8 27.5 311 98-446 28-354 (395)
161 TIGR03538 DapC_gpp succinyldia 99.8 7.4E-18 1.6E-22 171.7 25.3 305 95-445 24-353 (393)
162 PRK05387 histidinol-phosphate 99.8 8.2E-18 1.8E-22 168.7 25.2 290 98-444 23-319 (353)
163 PLN00143 tyrosine/nicotianamin 99.8 8.7E-18 1.9E-22 172.0 25.6 316 95-446 28-371 (409)
164 PRK07550 hypothetical protein; 99.8 5.3E-18 1.1E-22 172.3 23.7 309 97-445 27-350 (386)
165 PRK05166 histidinol-phosphate 99.8 6E-18 1.3E-22 171.0 23.8 299 98-446 35-339 (371)
166 PLN02187 rooty/superroot1 99.8 1.3E-17 2.7E-22 173.1 26.3 318 97-445 64-404 (462)
167 PRK05664 threonine-phosphate d 99.8 6E-18 1.3E-22 168.3 22.7 272 99-444 20-296 (330)
168 PRK07865 N-succinyldiaminopime 99.8 1.7E-17 3.7E-22 167.2 25.4 298 97-445 25-332 (364)
169 PRK04870 histidinol-phosphate 99.8 2.1E-17 4.5E-22 166.1 25.8 293 98-445 25-323 (356)
170 TIGR03539 DapC_actino succinyl 99.8 1.6E-17 3.4E-22 167.1 24.7 294 97-445 19-326 (357)
171 PLN02656 tyrosine transaminase 99.8 2.8E-17 6.1E-22 168.3 26.6 320 97-446 29-370 (409)
172 PRK05957 aspartate aminotransf 99.8 3.8E-17 8.2E-22 166.2 27.4 304 100-446 28-349 (389)
173 PRK08912 hypothetical protein; 99.8 2.7E-17 5.9E-22 167.1 26.3 303 100-445 27-348 (387)
174 PRK05839 hypothetical protein; 99.8 1.3E-17 2.8E-22 168.8 23.7 302 97-446 22-337 (374)
175 PRK06425 histidinol-phosphate 99.8 1.7E-17 3.6E-22 165.3 23.4 275 100-445 17-298 (332)
176 PRK13355 bifunctional HTH-doma 99.8 1.9E-17 4.2E-22 174.4 24.8 314 96-445 143-478 (517)
177 PRK07683 aminotransferase A; V 99.8 6.8E-17 1.5E-21 164.3 27.7 304 99-445 28-347 (387)
178 PLN00145 tyrosine/nicotianamin 99.8 4.6E-17 1E-21 167.6 26.7 317 98-446 51-391 (430)
179 PRK07568 aspartate aminotransf 99.8 4.6E-17 1E-21 165.9 26.4 302 98-445 29-353 (397)
180 PRK06107 aspartate aminotransf 99.8 1E-16 2.2E-21 163.9 28.0 320 98-446 32-367 (402)
181 PRK08363 alanine aminotransfer 99.8 7.2E-17 1.6E-21 164.7 26.1 308 97-445 28-358 (398)
182 TIGR01265 tyr_nico_aTase tyros 99.8 9E-17 1.9E-21 164.3 26.1 314 97-445 29-367 (403)
183 PRK07337 aminotransferase; Val 99.8 1.2E-16 2.6E-21 162.5 26.9 308 98-445 29-352 (388)
184 PRK01688 histidinol-phosphate 99.8 1.9E-17 4.1E-22 166.1 20.7 289 100-445 29-322 (351)
185 PRK06959 putative threonine-ph 99.8 2.8E-17 6E-22 164.2 21.2 269 99-444 24-301 (339)
186 PRK03967 histidinol-phosphate 99.8 6.4E-17 1.4E-21 161.4 23.3 279 97-444 16-301 (337)
187 PRK13520 L-tyrosine decarboxyl 99.8 2.4E-16 5.3E-21 159.0 27.2 285 114-445 30-338 (371)
188 PRK06855 aminotransferase; Val 99.8 1.2E-16 2.6E-21 164.8 25.3 291 98-417 31-345 (433)
189 PRK08354 putative aminotransfe 99.8 1.8E-16 4E-21 156.4 25.5 270 97-445 6-279 (311)
190 PRK07590 L,L-diaminopimelate a 99.8 1E-16 2.2E-21 164.1 23.5 311 98-445 33-375 (409)
191 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1E-16 2.2E-21 162.0 22.6 272 140-444 50-336 (370)
192 PRK09265 aminotransferase AlaT 99.8 3.1E-16 6.7E-21 160.4 25.8 310 97-445 31-365 (404)
193 PLN02672 methionine S-methyltr 99.7 4.8E-16 1E-20 171.4 27.6 325 93-446 691-1047(1082)
194 PRK07908 hypothetical protein; 99.7 8.1E-16 1.8E-20 154.2 27.2 282 98-445 21-312 (349)
195 PTZ00377 alanine aminotransfer 99.7 3.6E-16 7.8E-21 163.4 25.0 232 117-369 90-348 (481)
196 PLN02721 threonine aldolase 99.7 4.4E-16 9.5E-21 156.0 24.1 300 100-445 6-320 (353)
197 PRK04781 histidinol-phosphate 99.7 1.3E-16 2.7E-21 161.0 20.2 269 137-445 55-329 (364)
198 TIGR03542 DAPAT_plant LL-diami 99.7 3.8E-16 8.3E-21 159.6 22.3 311 98-445 32-368 (402)
199 PLN02376 1-aminocyclopropane-1 99.7 6.8E-16 1.5E-20 161.2 24.4 267 156-446 117-402 (496)
200 PRK10534 L-threonine aldolase; 99.7 4.4E-16 9.5E-21 155.0 20.6 291 101-445 1-303 (333)
201 PLN02607 1-aminocyclopropane-1 99.7 2E-15 4.3E-20 155.9 25.6 321 93-446 39-401 (447)
202 PTZ00376 aspartate aminotransf 99.7 5.8E-16 1.3E-20 158.3 21.4 312 99-446 29-377 (404)
203 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 2.2E-15 4.7E-20 153.2 25.4 300 112-443 28-347 (387)
204 PRK06836 aspartate aminotransf 99.7 2.2E-15 4.9E-20 153.5 25.6 303 98-446 32-358 (394)
205 PLN02368 alanine transaminase 99.7 1.1E-15 2.4E-20 155.9 23.1 206 143-369 109-340 (407)
206 cd06502 TA_like Low-specificit 99.7 1.5E-15 3.1E-20 151.3 22.3 296 103-445 1-309 (338)
207 PRK09257 aromatic amino acid a 99.7 1.7E-15 3.7E-20 154.5 23.2 311 100-445 27-371 (396)
208 PRK04635 histidinol-phosphate 99.7 1.2E-15 2.5E-20 153.4 21.5 285 98-444 30-321 (354)
209 cd06453 SufS_like Cysteine des 99.7 2.5E-14 5.3E-19 144.6 29.8 294 112-445 7-335 (373)
210 PLN02450 1-aminocyclopropane-1 99.7 8.1E-15 1.8E-19 152.4 26.2 278 142-446 87-394 (468)
211 PRK09440 avtA valine--pyruvate 99.7 3.1E-15 6.6E-20 153.6 22.3 311 100-445 31-368 (416)
212 TIGR03392 FeS_syn_CsdA cystein 99.7 2.2E-14 4.8E-19 146.3 28.5 299 98-445 16-351 (398)
213 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 3.8E-15 8.1E-20 150.1 22.5 298 114-443 11-328 (361)
214 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 1.5E-14 3.3E-19 144.7 26.6 287 116-446 10-323 (355)
215 TIGR01976 am_tr_V_VC1184 cyste 99.7 2.6E-14 5.6E-19 145.7 28.5 298 99-445 18-356 (397)
216 KOG0257 Kynurenine aminotransf 99.7 2.7E-15 5.9E-20 146.5 19.9 278 117-416 46-344 (420)
217 PRK10874 cysteine sulfinate de 99.7 4.3E-14 9.4E-19 144.4 28.9 297 98-445 19-354 (401)
218 PLN02231 alanine transaminase 99.7 1.5E-14 3.3E-19 152.1 25.2 231 117-368 142-399 (534)
219 cd00614 CGS_like CGS_like: Cys 99.7 4.1E-15 8.9E-20 150.2 20.1 240 136-416 35-293 (369)
220 PRK09295 bifunctional cysteine 99.7 8.6E-14 1.9E-18 142.4 28.7 299 98-445 23-360 (406)
221 TIGR03812 tyr_de_CO2_Arch tyro 99.7 8.7E-14 1.9E-18 140.5 28.4 287 116-445 32-343 (373)
222 TIGR03402 FeS_nifS cysteine de 99.7 9E-14 2E-18 140.9 28.0 293 101-445 2-317 (379)
223 KOG0259 Tyrosine aminotransfer 99.6 5.4E-14 1.2E-18 135.3 23.8 215 99-338 61-286 (447)
224 TIGR02326 transamin_PhnW 2-ami 99.6 7.3E-14 1.6E-18 140.7 25.8 286 116-446 14-328 (363)
225 PRK13238 tnaA tryptophanase/L- 99.6 1.5E-13 3.2E-18 142.2 28.0 311 98-444 44-382 (460)
226 PLN02397 aspartate transaminas 99.6 4.1E-14 8.9E-19 145.5 23.6 272 140-444 90-393 (423)
227 PLN02651 cysteine desulfurase 99.6 6.3E-14 1.4E-18 141.3 22.8 247 114-393 9-277 (364)
228 cd06451 AGAT_like Alanine-glyo 99.6 1.7E-13 3.6E-18 137.6 25.7 282 116-445 10-321 (356)
229 TIGR01325 O_suc_HS_sulf O-succ 99.6 4.3E-14 9.4E-19 143.3 21.5 241 135-416 48-306 (380)
230 cd00616 AHBA_syn 3-amino-5-hyd 99.6 7.4E-14 1.6E-18 139.8 22.9 273 122-445 3-298 (352)
231 PRK13034 serine hydroxymethylt 99.6 2.5E-13 5.4E-18 139.3 26.6 288 116-445 40-346 (416)
232 TIGR02006 IscS cysteine desulf 99.6 9.2E-14 2E-18 142.0 23.4 259 99-394 4-282 (402)
233 TIGR01979 sufS cysteine desulf 99.6 1E-12 2.2E-17 134.3 30.4 300 100-445 20-357 (403)
234 PRK02948 cysteine desulfurase; 99.6 4E-13 8.8E-18 136.2 26.8 295 100-445 2-319 (381)
235 PRK08637 hypothetical protein; 99.6 2E-13 4.2E-18 139.0 24.5 253 159-444 70-354 (388)
236 PRK00011 glyA serine hydroxyme 99.6 6.4E-13 1.4E-17 136.4 28.4 302 99-445 25-343 (416)
237 PRK09275 aspartate aminotransf 99.6 7.4E-14 1.6E-18 145.5 21.3 157 159-340 162-328 (527)
238 PRK07049 methionine gamma-lyas 99.6 1.5E-13 3.2E-18 141.2 22.5 241 136-416 78-349 (427)
239 TIGR03235 DNA_S_dndA cysteine 99.6 3.3E-13 7.1E-18 135.5 24.3 250 113-393 7-279 (353)
240 cd00378 SHMT Serine-glycine hy 99.6 7.5E-13 1.6E-17 135.2 26.1 302 99-445 19-339 (402)
241 PLN02242 methionine gamma-lyas 99.6 1.6E-13 3.5E-18 140.5 20.8 255 136-437 71-347 (418)
242 PRK13479 2-aminoethylphosphona 99.6 1.1E-12 2.3E-17 132.5 26.6 285 116-445 16-328 (368)
243 KOG1358 Serine palmitoyltransf 99.6 4.6E-14 9.9E-19 136.2 15.5 316 85-444 81-422 (467)
244 PLN02855 Bifunctional selenocy 99.6 1.6E-12 3.4E-17 133.9 27.9 302 98-445 32-374 (424)
245 TIGR03801 asp_4_decarbox aspar 99.6 2.4E-13 5.3E-18 141.4 21.2 202 114-340 105-327 (521)
246 PLN02409 serine--glyoxylate am 99.6 5.9E-13 1.3E-17 136.0 23.7 289 116-446 20-337 (401)
247 PF00266 Aminotran_5: Aminotra 99.6 2E-12 4.3E-17 130.7 27.3 291 113-445 8-337 (371)
248 TIGR03403 nifS_epsilon cystein 99.6 1.8E-12 4E-17 131.5 26.1 295 101-445 2-320 (382)
249 TIGR01814 kynureninase kynuren 99.5 1.8E-12 4E-17 132.6 25.8 302 97-444 26-373 (406)
250 PRK06767 methionine gamma-lyas 99.5 4.1E-13 8.9E-18 136.4 20.6 254 136-442 56-327 (386)
251 PRK07810 O-succinylhomoserine 99.5 6.7E-13 1.4E-17 135.4 21.7 236 136-416 65-323 (403)
252 PRK08249 cystathionine gamma-s 99.5 8.5E-13 1.8E-17 134.4 22.3 237 135-416 58-316 (398)
253 TIGR02379 ECA_wecE TDP-4-keto- 99.5 2.1E-12 4.6E-17 130.6 24.7 277 118-445 11-319 (376)
254 TIGR02080 O_succ_thio_ly O-suc 99.5 1.1E-12 2.4E-17 132.9 22.4 236 136-416 46-304 (382)
255 COG1168 MalY Bifunctional PLP- 99.5 8E-12 1.7E-16 121.3 27.0 272 116-416 39-327 (388)
256 TIGR01977 am_tr_V_EF2568 cyste 99.5 5.4E-12 1.2E-16 127.5 27.2 289 116-445 12-333 (376)
257 TIGR01437 selA_rel uncharacter 99.5 1E-11 2.2E-16 125.2 28.2 248 100-394 9-282 (363)
258 KOG1357 Serine palmitoyltransf 99.5 1.1E-12 2.4E-17 128.8 19.6 242 120-394 156-424 (519)
259 PRK07504 O-succinylhomoserine 99.5 1.2E-12 2.7E-17 133.3 20.3 242 134-416 58-318 (398)
260 PRK07269 cystathionine gamma-s 99.5 2.9E-12 6.3E-17 129.0 22.5 233 136-416 49-288 (364)
261 PRK08045 cystathionine gamma-s 99.5 3.3E-12 7.1E-17 129.6 23.0 237 135-416 46-305 (386)
262 PRK06460 hypothetical protein; 99.5 1.6E-12 3.6E-17 131.5 20.4 240 136-416 40-297 (376)
263 PRK08247 cystathionine gamma-s 99.5 3.8E-12 8.3E-17 128.4 22.5 234 136-416 47-288 (366)
264 PRK14012 cysteine desulfurase; 99.5 4.4E-12 9.5E-17 129.7 23.2 258 99-393 4-283 (404)
265 PRK07582 cystathionine gamma-l 99.5 2.3E-12 5.1E-17 129.9 20.6 232 136-416 46-300 (366)
266 PRK07050 cystathionine beta-ly 99.5 4.5E-12 9.8E-17 129.0 22.0 194 136-368 60-258 (394)
267 cd00617 Tnase_like Tryptophana 99.5 1.1E-11 2.5E-16 126.7 24.7 311 96-443 17-356 (431)
268 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2.9E-12 6.2E-17 131.5 20.3 165 136-339 52-219 (418)
269 PRK08133 O-succinylhomoserine 99.5 3E-12 6.4E-17 130.2 20.1 236 136-416 56-313 (390)
270 cd06450 DOPA_deC_like DOPA dec 99.5 1.7E-11 3.8E-16 122.3 25.3 250 142-444 39-310 (345)
271 COG1104 NifS Cysteine sulfinat 99.5 6E-12 1.3E-16 124.2 21.4 257 100-394 3-279 (386)
272 COG0520 csdA Selenocysteine ly 99.5 5.2E-11 1.1E-15 121.1 28.9 298 99-446 23-362 (405)
273 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.5 1.8E-11 3.8E-16 124.1 25.1 277 118-445 11-318 (375)
274 cd01494 AAT_I Aspartate aminot 99.5 2.3E-12 5E-17 114.3 16.4 167 143-338 2-170 (170)
275 PRK08574 cystathionine gamma-s 99.5 8.3E-12 1.8E-16 126.7 22.0 235 136-416 48-307 (385)
276 TIGR01324 cysta_beta_ly_B cyst 99.5 3E-12 6.6E-17 129.4 18.2 255 137-438 46-318 (377)
277 PRK11658 UDP-4-amino-4-deoxy-L 99.5 1.4E-11 2.9E-16 125.1 23.0 278 118-445 14-322 (379)
278 PRK08776 cystathionine gamma-s 99.5 1.3E-11 2.9E-16 125.9 23.0 236 136-416 55-313 (405)
279 TIGR01328 met_gam_lyase methio 99.5 5.6E-12 1.2E-16 128.2 20.2 241 135-416 53-313 (391)
280 PRK06234 methionine gamma-lyas 99.5 5.1E-12 1.1E-16 128.9 19.9 252 134-437 57-334 (400)
281 PRK07811 cystathionine gamma-s 99.5 1.3E-11 2.7E-16 125.6 22.7 236 136-416 56-314 (388)
282 KOG0256 1-aminocyclopropane-1- 99.4 2.8E-11 6.1E-16 117.8 23.0 284 115-445 121-424 (471)
283 PRK05968 hypothetical protein; 99.4 7.9E-12 1.7E-16 127.1 20.3 251 136-440 58-326 (389)
284 PLN03226 serine hydroxymethylt 99.4 5.7E-11 1.2E-15 123.4 26.2 293 115-446 45-375 (475)
285 PRK08861 cystathionine gamma-s 99.4 2.6E-11 5.6E-16 122.9 22.5 234 136-416 48-306 (388)
286 PRK07503 methionine gamma-lyas 99.4 1.9E-11 4.1E-16 124.8 21.4 236 136-416 60-319 (403)
287 COG2008 GLY1 Threonine aldolas 99.4 2.1E-11 4.6E-16 118.0 19.6 299 102-444 2-311 (342)
288 COG0075 Serine-pyruvate aminot 99.4 1E-10 2.3E-15 116.2 25.0 244 116-394 16-284 (383)
289 PRK15407 lipopolysaccharide bi 99.4 9.3E-11 2E-15 120.9 25.3 276 120-444 46-375 (438)
290 KOG0633 Histidinol phosphate a 99.4 2E-11 4.2E-16 112.3 17.4 270 138-444 66-342 (375)
291 PRK06084 O-acetylhomoserine am 99.4 2.4E-11 5.3E-16 124.7 19.6 163 136-337 53-218 (425)
292 cd00615 Orn_deC_like Ornithine 99.4 2.3E-11 4.9E-16 119.1 18.1 227 138-392 56-293 (294)
293 PRK09028 cystathionine beta-ly 99.4 1.1E-10 2.4E-15 118.3 22.8 195 138-371 58-256 (394)
294 TIGR03588 PseC UDP-4-keto-6-de 99.4 4.8E-10 1E-14 113.8 27.2 282 118-446 10-326 (380)
295 PRK05994 O-acetylhomoserine am 99.3 4E-11 8.7E-16 123.3 18.6 162 137-337 59-223 (427)
296 PTZ00094 serine hydroxymethylt 99.3 3.9E-10 8.5E-15 117.0 25.4 307 99-444 34-362 (452)
297 PRK06176 cystathionine gamma-s 99.3 2.5E-10 5.4E-15 115.7 22.9 171 136-346 45-220 (380)
298 PRK00451 glycine dehydrogenase 99.3 1.1E-09 2.4E-14 113.6 27.5 170 142-345 113-290 (447)
299 KOG1368 Threonine aldolase [Am 99.3 7E-11 1.5E-15 110.7 16.1 295 100-445 22-336 (384)
300 PRK08248 O-acetylhomoserine am 99.3 2.1E-10 4.6E-15 117.9 21.3 163 136-337 59-224 (431)
301 PRK07671 cystathionine beta-ly 99.3 3.3E-10 7.2E-15 114.7 21.7 238 136-415 45-301 (377)
302 PRK05967 cystathionine beta-ly 99.3 3.3E-10 7.2E-15 114.7 20.7 240 137-416 60-316 (395)
303 TIGR03531 selenium_SpcS O-phos 99.3 1.7E-09 3.7E-14 110.8 25.1 271 140-441 104-386 (444)
304 PRK07812 O-acetylhomoserine am 99.3 4.7E-10 1E-14 115.3 20.9 162 137-336 65-230 (436)
305 PF01041 DegT_DnrJ_EryC1: DegT 99.3 3E-09 6.6E-14 107.3 26.4 280 118-446 5-309 (363)
306 PRK04366 glycine dehydrogenase 99.3 3.1E-09 6.7E-14 111.0 26.7 288 115-444 81-410 (481)
307 TIGR01329 cysta_beta_ly_E cyst 99.2 4.2E-10 9E-15 114.1 19.2 192 139-370 45-241 (378)
308 PRK05939 hypothetical protein; 99.2 7.7E-10 1.7E-14 112.7 21.1 163 136-338 42-207 (397)
309 KOG0634 Aromatic amino acid am 99.2 1.4E-09 3.1E-14 106.8 21.9 263 160-445 126-424 (472)
310 PRK08134 O-acetylhomoserine am 99.2 1.1E-09 2.3E-14 112.7 22.2 161 136-335 59-222 (433)
311 PRK13580 serine hydroxymethylt 99.2 3.1E-09 6.8E-14 109.2 25.3 182 240-445 209-399 (493)
312 PLN02509 cystathionine beta-ly 99.2 5.2E-10 1.1E-14 115.5 19.6 231 139-415 131-384 (464)
313 PF01053 Cys_Met_Meta_PP: Cys/ 99.2 2.2E-09 4.7E-14 108.5 22.8 247 136-436 50-323 (386)
314 PRK06702 O-acetylhomoserine am 99.2 1.9E-09 4.2E-14 110.3 22.1 153 138-328 58-212 (432)
315 PRK04311 selenocysteine syntha 99.2 3.4E-09 7.4E-14 109.5 23.4 222 117-369 99-337 (464)
316 TIGR02618 tyr_phenol_ly tyrosi 99.2 6.5E-09 1.4E-13 105.4 23.6 285 97-416 36-346 (450)
317 PRK02769 histidine decarboxyla 99.2 6.4E-09 1.4E-13 105.2 23.3 226 142-394 66-311 (380)
318 PRK08114 cystathionine beta-ly 99.1 2E-09 4.4E-14 109.0 18.4 234 136-416 57-316 (395)
319 PRK08064 cystathionine beta-ly 99.1 2.2E-09 4.7E-14 109.3 18.6 193 137-369 50-247 (390)
320 TIGR00474 selA seryl-tRNA(sec) 99.1 1.2E-08 2.7E-13 105.1 23.7 221 116-370 93-333 (454)
321 PRK13237 tyrosine phenol-lyase 99.1 1.1E-08 2.4E-13 104.1 22.4 284 97-414 43-351 (460)
322 PLN02414 glycine dehydrogenase 99.1 2.4E-08 5.2E-13 110.8 25.6 268 140-444 567-871 (993)
323 COG0399 WecE Predicted pyridox 99.1 1.3E-08 2.9E-13 101.4 21.2 273 118-442 15-311 (374)
324 PLN03032 serine decarboxylase; 99.1 2.9E-08 6.3E-13 99.9 23.5 227 141-394 66-314 (374)
325 KOG1549 Cysteine desulfurase N 99.1 3.5E-09 7.5E-14 105.3 15.8 203 99-339 44-257 (428)
326 PRK06434 cystathionine gamma-l 99.1 1.6E-08 3.4E-13 102.4 20.9 232 137-416 60-308 (384)
327 PF01212 Beta_elim_lyase: Beta 99.1 2.2E-10 4.7E-15 111.5 6.7 199 116-343 7-213 (290)
328 KOG2862 Alanine-glyoxylate ami 99.1 5.9E-08 1.3E-12 91.8 22.5 235 110-394 38-301 (385)
329 TIGR01788 Glu-decarb-GAD gluta 99.0 1.5E-07 3.3E-12 96.6 26.2 295 116-443 53-388 (431)
330 PRK05613 O-acetylhomoserine am 99.0 1.8E-08 3.9E-13 103.7 17.8 162 137-336 65-229 (437)
331 COG2873 MET17 O-acetylhomoseri 99.0 1.6E-08 3.4E-13 98.0 16.0 192 112-343 34-228 (426)
332 PRK12566 glycine dehydrogenase 98.9 5.8E-07 1.2E-11 98.4 26.2 262 142-444 544-840 (954)
333 COG1103 Archaea-specific pyrid 98.9 3.5E-07 7.6E-12 85.1 20.0 224 140-394 60-298 (382)
334 TIGR00461 gcvP glycine dehydro 98.9 6.7E-07 1.5E-11 98.4 25.8 268 141-444 530-831 (939)
335 TIGR02617 tnaA_trp_ase tryptop 98.9 3.1E-07 6.8E-12 92.6 21.1 286 98-409 40-356 (467)
336 PRK03080 phosphoserine aminotr 98.8 4.2E-07 9.1E-12 92.2 21.6 279 116-444 23-336 (378)
337 COG0626 MetC Cystathionine bet 98.8 4.7E-07 1E-11 90.9 21.4 234 137-417 59-319 (396)
338 KOG0053 Cystathionine beta-lya 98.8 8.6E-08 1.9E-12 95.3 15.8 214 138-390 74-294 (409)
339 PLN02724 Molybdenum cofactor s 98.8 1.6E-06 3.4E-11 96.2 27.5 319 99-446 35-418 (805)
340 PRK05367 glycine dehydrogenase 98.8 6.7E-07 1.4E-11 99.7 24.3 268 141-445 542-840 (954)
341 TIGR01364 serC_1 phosphoserine 98.8 9.5E-07 2.1E-11 88.6 21.5 278 117-445 4-314 (349)
342 COG3977 Alanine-alpha-ketoisov 98.8 7.7E-07 1.7E-11 84.0 18.9 275 140-446 77-369 (417)
343 PRK05355 3-phosphoserine/phosp 98.7 1.7E-06 3.7E-11 87.2 20.7 275 116-444 14-323 (360)
344 TIGR01366 serC_3 phosphoserine 98.7 1.5E-06 3.2E-11 87.7 19.7 275 117-446 15-325 (361)
345 KOG0258 Alanine aminotransfera 98.7 9.8E-07 2.1E-11 86.0 16.3 270 118-415 89-399 (475)
346 TIGR03799 NOD_PanD_pyr putativ 98.6 8.2E-06 1.8E-10 85.8 24.0 214 161-394 162-419 (522)
347 PLN02880 tyrosine decarboxylas 98.6 6E-06 1.3E-10 86.4 21.4 280 142-442 123-444 (490)
348 PLN02263 serine decarboxylase 98.5 4.9E-05 1.1E-09 78.3 25.0 225 142-394 134-381 (470)
349 PLN02271 serine hydroxymethylt 98.5 0.00011 2.4E-09 76.6 26.1 213 165-401 221-459 (586)
350 PLN02452 phosphoserine transam 98.5 3.4E-05 7.3E-10 77.7 21.9 290 100-446 7-330 (365)
351 COG0112 GlyA Glycine/serine hy 98.5 9.9E-05 2.2E-09 72.8 24.2 292 115-446 37-345 (413)
352 COG0076 GadB Glutamate decarbo 98.4 4.1E-05 8.9E-10 79.2 22.6 252 116-394 74-361 (460)
353 PF00464 SHMT: Serine hydroxym 98.4 1.2E-05 2.6E-10 81.1 17.4 248 164-446 92-361 (399)
354 cd00611 PSAT_like Phosphoserin 98.4 1.4E-05 3.1E-10 80.3 17.0 281 116-444 10-321 (355)
355 PRK12462 phosphoserine aminotr 98.3 9.6E-05 2.1E-09 74.1 21.7 280 117-446 16-329 (364)
356 PLN02590 probable tyrosine dec 98.3 0.00075 1.6E-08 71.2 28.7 279 144-443 173-493 (539)
357 PF12897 Aminotran_MocR: Alani 98.3 2.6E-05 5.7E-10 76.7 15.9 273 140-445 68-374 (425)
358 COG1448 TyrB Aspartate/tyrosin 98.3 3.1E-05 6.7E-10 76.0 16.2 253 140-411 68-349 (396)
359 TIGR01365 serC_2 phosphoserine 98.2 0.00013 2.8E-09 73.7 20.0 285 117-446 15-338 (374)
360 PF00282 Pyridoxal_deC: Pyrido 98.2 0.0005 1.1E-08 69.6 23.8 228 144-394 82-354 (373)
361 PF01276 OKR_DC_1: Orn/Lys/Arg 98.1 7.5E-05 1.6E-09 75.8 16.1 229 139-394 64-317 (417)
362 COG1003 GcvP Glycine cleavage 98.1 0.00039 8.4E-09 69.3 19.9 260 141-443 109-408 (496)
363 COG1921 SelA Selenocysteine sy 98.1 0.00036 7.9E-09 69.5 19.9 223 117-375 40-273 (395)
364 PF03841 SelA: L-seryl-tRNA se 98.0 7.9E-06 1.7E-10 80.5 6.3 223 111-373 11-261 (367)
365 PLN02414 glycine dehydrogenase 98.0 0.0015 3.2E-08 73.3 24.1 276 116-445 117-437 (993)
366 PRK05367 glycine dehydrogenase 98.0 0.00088 1.9E-08 75.2 21.7 247 143-444 123-409 (954)
367 PRK15029 arginine decarboxylas 97.9 0.0011 2.4E-08 72.3 21.1 231 142-395 206-465 (755)
368 COG3844 Kynureninase [Amino ac 97.9 0.005 1.1E-07 59.5 21.9 293 94-443 27-367 (407)
369 COG3033 TnaA Tryptophanase [Am 97.7 0.0085 1.9E-07 58.6 20.1 287 97-411 44-361 (471)
370 TIGR03811 tyr_de_CO2_Ent tyros 97.4 0.062 1.4E-06 57.6 23.8 151 240-394 262-475 (608)
371 PRK13578 ornithine decarboxyla 97.3 0.014 3.1E-07 63.2 18.3 165 141-327 174-358 (720)
372 COG0403 GcvP Glycine cleavage 97.3 0.19 4.1E-06 50.6 24.0 168 145-348 124-300 (450)
373 PF02347 GDC-P: Glycine cleava 97.2 0.02 4.3E-07 58.4 16.7 210 142-394 111-364 (429)
374 TIGR00461 gcvP glycine dehydro 97.1 0.1 2.3E-06 58.3 23.2 250 143-445 111-399 (939)
375 PF06838 Met_gamma_lyase: Meth 97.1 0.039 8.4E-07 54.5 17.2 207 116-347 25-247 (403)
376 PRK15399 lysine decarboxylase 96.9 0.076 1.7E-06 57.7 18.9 225 141-395 195-443 (713)
377 KOG2040 Glycine dehydrogenase 96.8 0.1 2.2E-06 54.8 18.4 268 141-442 582-880 (1001)
378 COG1982 LdcC Arginine/lysine/o 96.8 0.18 4E-06 52.9 20.1 164 140-328 69-236 (557)
379 PRK15400 lysine decarboxylase 96.7 0.069 1.5E-06 58.1 16.7 227 141-395 195-443 (714)
380 KOG1411 Aspartate aminotransfe 96.3 0.26 5.5E-06 48.3 16.4 226 82-345 52-298 (427)
381 PRK12566 glycine dehydrogenase 95.3 2.9 6.3E-05 47.0 21.5 159 143-348 126-297 (954)
382 PF05889 SLA_LP_auto_ag: Solub 94.5 0.91 2E-05 45.7 13.7 189 240-442 141-340 (389)
383 KOG3846 L-kynurenine hydrolase 94.5 3.8 8.2E-05 39.8 17.0 296 111-444 74-427 (465)
384 KOG1412 Aspartate aminotransfe 94.2 0.63 1.4E-05 45.1 11.1 81 263-346 187-279 (410)
385 KOG2467 Glycine/serine hydroxy 93.8 3.8 8.1E-05 40.8 15.7 48 277-328 206-256 (477)
386 KOG0629 Glutamate decarboxylas 93.7 0.88 1.9E-05 45.9 11.6 157 160-341 161-338 (510)
387 KOG1383 Glutamate decarboxylas 93.2 11 0.00023 38.8 18.4 182 240-444 208-411 (491)
388 COG1932 SerC Phosphoserine ami 92.0 14 0.0003 36.8 23.1 161 256-444 146-328 (365)
389 PLN02994 1-aminocyclopropane-1 92.0 0.86 1.9E-05 40.0 8.1 56 139-196 94-153 (153)
390 PF04864 Alliinase_C: Allinase 90.7 13 0.00028 36.9 15.4 173 157-373 65-245 (363)
391 COG4100 Cystathionine beta-lya 82.2 29 0.00063 33.8 12.2 185 140-347 64-258 (416)
392 KOG0628 Aromatic-L-amino-acid/ 77.9 13 0.00027 38.3 8.7 63 231-299 214-276 (511)
393 cd01522 RHOD_1 Member of the R 70.5 14 0.0003 30.4 6.1 52 148-201 55-106 (117)
394 cd01393 recA_like RecA is a b 63.3 82 0.0018 28.8 10.5 45 253-297 113-169 (226)
395 cd01821 Rhamnogalacturan_acety 55.9 24 0.00051 31.8 5.3 58 235-292 88-150 (198)
396 COG1105 FruK Fructose-1-phosph 54.3 37 0.00081 33.3 6.5 36 257-296 132-167 (310)
397 KOG2433 Uncharacterized conser 48.7 68 0.0015 32.4 7.3 63 116-181 434-498 (577)
398 cd00158 RHOD Rhodanese Homolog 46.8 38 0.00083 25.4 4.5 41 155-197 48-88 (89)
399 PF13580 SIS_2: SIS domain; PD 45.2 1.3E+02 0.0028 25.5 7.9 32 140-171 18-49 (138)
400 KOG1465 Translation initiation 45.2 3.1E+02 0.0067 26.9 12.9 115 159-304 163-277 (353)
401 PLN02160 thiosulfate sulfurtra 45.0 39 0.00084 28.8 4.6 47 152-200 76-122 (136)
402 cd01444 GlpE_ST GlpE sulfurtra 44.8 42 0.00092 25.9 4.5 42 154-197 53-94 (96)
403 PF13481 AAA_25: AAA domain; P 44.0 26 0.00057 31.2 3.6 52 240-293 129-184 (193)
404 PLN02672 methionine S-methyltr 43.2 1.7E+02 0.0036 34.2 10.3 21 276-296 545-565 (1082)
405 COG0108 RibB 3,4-dihydroxy-2-b 42.3 29 0.00063 31.7 3.4 34 254-292 156-189 (203)
406 cd01523 RHOD_Lact_B Member of 41.4 51 0.0011 25.9 4.5 43 152-197 56-98 (100)
407 PRK00162 glpE thiosulfate sulf 40.1 52 0.0011 26.3 4.5 51 145-198 47-97 (108)
408 PF13167 GTP-bdg_N: GTP-bindin 39.8 1.9E+02 0.004 23.1 7.4 61 237-298 7-68 (95)
409 PF13407 Peripla_BP_4: Peripla 39.7 87 0.0019 29.0 6.6 46 235-293 40-85 (257)
410 COG2515 Acd 1-aminocyclopropan 39.6 3.8E+02 0.0083 26.4 12.6 42 257-300 244-285 (323)
411 COG0216 PrfA Protein chain rel 39.0 1.2E+02 0.0025 30.2 7.1 86 117-210 74-175 (363)
412 cd01528 RHOD_2 Member of the R 38.5 60 0.0013 25.5 4.5 40 157-198 58-97 (101)
413 cd01535 4RHOD_Repeat_4 Member 38.1 71 0.0015 27.5 5.2 59 144-205 37-95 (145)
414 COG0742 N6-adenine-specific me 37.1 1.2E+02 0.0027 27.4 6.7 82 95-195 41-125 (187)
415 cd01836 FeeA_FeeB_like SGNH_hy 36.5 2.9E+02 0.0063 24.2 9.3 32 145-176 28-59 (191)
416 cd01449 TST_Repeat_2 Thiosulfa 35.9 1E+02 0.0022 24.9 5.6 52 144-197 64-116 (118)
417 smart00642 Aamy Alpha-amylase 35.9 65 0.0014 28.5 4.7 47 254-300 32-95 (166)
418 cd01123 Rad51_DMC1_radA Rad51_ 34.8 2.4E+02 0.0052 25.9 8.7 57 240-298 103-171 (235)
419 cd01533 4RHOD_Repeat_2 Member 34.7 74 0.0016 25.5 4.6 39 158-198 67-106 (109)
420 cd01524 RHOD_Pyr_redox Member 33.4 1.4E+02 0.003 22.9 5.8 48 146-197 41-88 (90)
421 cd01838 Isoamyl_acetate_hydrol 33.3 3.2E+02 0.007 23.8 9.0 57 236-292 87-160 (199)
422 PF03853 YjeF_N: YjeF-related 33.2 1.3E+02 0.0027 26.6 6.2 64 255-323 99-164 (169)
423 cd01822 Lysophospholipase_L1_l 33.0 62 0.0014 28.1 4.2 55 237-292 84-139 (177)
424 cd01534 4RHOD_Repeat_3 Member 32.4 1.1E+02 0.0023 23.8 5.0 37 158-197 57-93 (95)
425 cd00984 DnaB_C DnaB helicase C 32.3 1.2E+02 0.0026 28.1 6.2 51 240-293 112-168 (242)
426 PF12138 Spherulin4: Spherulat 31.7 92 0.002 29.7 5.2 50 242-292 20-71 (253)
427 cd01519 RHOD_HSP67B2 Member of 31.6 79 0.0017 24.9 4.2 50 145-196 53-103 (106)
428 PRK10949 protease 4; Provision 30.9 83 0.0018 34.2 5.3 50 239-293 352-401 (618)
429 TIGR03865 PQQ_CXXCW PQQ-depend 30.9 97 0.0021 27.2 5.0 52 146-199 103-157 (162)
430 TIGR03772 anch_rpt_subst ancho 30.4 4.3E+02 0.0094 27.8 10.3 43 241-292 407-449 (479)
431 cd01018 ZntC Metal binding pro 30.2 4.8E+02 0.01 24.7 11.2 30 252-292 215-244 (266)
432 KOG4166 Thiamine pyrophosphate 30.1 31 0.00068 35.2 1.8 76 257-340 461-542 (675)
433 cd01834 SGNH_hydrolase_like_2 30.0 83 0.0018 27.5 4.5 57 236-292 84-151 (191)
434 PRK06371 translation initiatio 30.0 2.6E+02 0.0056 27.8 8.2 37 255-293 216-254 (329)
435 cd01527 RHOD_YgaP Member of th 29.9 66 0.0014 25.1 3.4 42 154-197 51-92 (99)
436 PRK09875 putative hydrolase; P 29.8 3.3E+02 0.0073 26.5 8.9 68 254-324 118-186 (292)
437 COG0352 ThiE Thiamine monophos 28.5 46 0.00099 30.8 2.5 65 275-343 52-118 (211)
438 PRK10886 DnaA initiator-associ 27.5 4.7E+02 0.01 23.8 11.6 34 251-293 108-141 (196)
439 cd01529 4RHOD_Repeats Member o 27.5 1.1E+02 0.0024 23.7 4.3 41 155-197 54-94 (96)
440 PRK05954 precorrin-8X methylmu 27.4 1.5E+02 0.0034 27.2 5.7 48 314-369 145-197 (203)
441 COG2159 Predicted metal-depend 27.0 2E+02 0.0043 28.0 6.8 56 239-303 114-169 (293)
442 PF01008 IF-2B: Initiation fac 26.8 5.6E+02 0.012 24.4 10.1 106 159-293 108-215 (282)
443 PLN02723 3-mercaptopyruvate su 25.8 1.3E+02 0.0029 29.6 5.5 53 144-198 255-308 (320)
444 smart00450 RHOD Rhodanese Homo 25.8 87 0.0019 23.7 3.4 41 156-198 55-95 (100)
445 TIGR02981 phageshock_pspE phag 25.4 2.1E+02 0.0045 22.9 5.6 50 144-196 44-94 (101)
446 PRK13936 phosphoheptose isomer 25.4 5.1E+02 0.011 23.4 11.6 17 277-293 127-143 (197)
447 cd07571 ALP_N-acyl_transferase 25.4 1.3E+02 0.0028 28.7 5.2 56 237-293 22-77 (270)
448 cd01448 TST_Repeat_1 Thiosulfa 25.3 1.3E+02 0.0029 24.4 4.7 53 143-197 64-118 (122)
449 COG0296 GlgB 1,4-alpha-glucan 25.1 64 0.0014 35.0 3.2 31 274-304 213-243 (628)
450 cd04501 SGNH_hydrolase_like_4 24.9 1.2E+02 0.0026 26.6 4.5 56 237-292 79-142 (183)
451 cd01125 repA Hexameric Replica 24.8 93 0.002 29.0 4.0 40 254-293 111-154 (239)
452 COG0648 Nfo Endonuclease IV [D 24.6 5.2E+02 0.011 25.1 9.0 58 240-302 124-182 (280)
453 PF03602 Cons_hypoth95: Conser 24.3 2.4E+02 0.0052 25.3 6.4 85 96-195 41-125 (183)
454 PF13401 AAA_22: AAA domain; P 24.1 58 0.0013 26.7 2.2 25 274-298 73-98 (131)
455 KOG3843 Predicted serine hydro 24.0 1.3E+02 0.0029 28.8 4.6 54 240-297 143-196 (432)
456 cd01518 RHOD_YceA Member of th 23.9 1E+02 0.0022 24.2 3.5 41 155-197 59-99 (101)
457 PRK11493 sseA 3-mercaptopyruva 23.8 1.6E+02 0.0035 28.3 5.5 53 144-198 217-270 (281)
458 PF02570 CbiC: Precorrin-8X me 23.7 91 0.002 28.6 3.5 48 314-369 143-195 (198)
459 PF12310 Elf-1_N: Transcriptio 23.6 69 0.0015 26.2 2.4 35 252-302 28-62 (108)
460 PF04909 Amidohydro_2: Amidohy 23.5 1.8E+02 0.004 27.0 5.8 54 236-294 83-136 (273)
461 cd01422 MGS Methylglyoxal synt 23.2 2.3E+02 0.005 23.2 5.6 45 242-293 61-106 (115)
462 cd01530 Cdc25 Cdc25 phosphatas 23.0 2.5E+02 0.0055 23.1 5.9 41 157-197 68-119 (121)
463 COG3598 RepA RecA-family ATPas 22.9 1.5E+02 0.0033 29.5 5.0 53 239-294 182-238 (402)
464 PHA03297 envelope glycoprotein 22.8 1.8E+02 0.0038 25.2 4.7 63 352-419 94-160 (185)
465 COG0616 SppA Periplasmic serin 22.7 1.3E+02 0.0029 29.6 4.7 83 254-347 97-179 (317)
466 cd01525 RHOD_Kc Member of the 22.2 1.1E+02 0.0023 24.1 3.4 37 158-196 66-102 (105)
467 PRK09545 znuA high-affinity zi 21.9 6.1E+02 0.013 24.8 9.2 40 241-291 239-278 (311)
468 smart00545 JmjN Small domain f 21.2 86 0.0019 21.0 2.1 21 273-293 15-35 (42)
469 TIGR00789 flhB_rel flhB C-term 20.8 77 0.0017 24.6 2.1 23 276-298 28-50 (82)
470 cd01828 sialate_O-acetylestera 20.7 1.3E+02 0.0028 26.0 3.8 55 237-292 68-128 (169)
471 TIGR02012 tigrfam_recA protein 20.3 6.5E+02 0.014 24.9 9.0 59 237-298 119-193 (321)
472 PRK13938 phosphoheptose isomer 20.1 6.6E+02 0.014 22.8 11.0 16 277-292 129-144 (196)
473 COG4422 Bacteriophage protein 20.0 1E+02 0.0023 27.7 2.9 25 270-294 198-222 (250)
No 1
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-99 Score=718.88 Aligned_cols=394 Identities=63% Similarity=1.037 Sum_probs=378.3
Q ss_pred CCCCCCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHh
Q 013235 51 SPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (447)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~ 130 (447)
.|++|.++.+++.+++++++++|.+..++.+|++|++|+|+||||.+|++|||+++|++++++|||||+|++|+.+|+.+
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~ls~~~~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~ 81 (442)
T KOG1404|consen 2 MPPPYTGPSTDQVLQKRRAFLSPGLTSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKK 81 (442)
T ss_pred CCCccCCcchhhHHHHhhhcCCcceeccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhh
Confidence 45578888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCc
Q 013235 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW 210 (447)
Q Consensus 131 ~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~ 210 (447)
++|++..|.++...+||++|++.+|++++.+||+||||||||+||+|||.||++.+||+++++|||.+..++++|+.+.|
T Consensus 82 l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~ 161 (442)
T KOG1404|consen 82 LYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPW 161 (442)
T ss_pred hEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC--CCeEeecCCCCcCCCCCCC-----hHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 211 KFNVVQ--TGVHHALNPDPYRGVFGAD-----GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 211 ~~~~~~--~g~~~~~~p~~~~~~~~~d-----~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
+++++. +++++.++|++||++|+++ .++|.+++++++....++.+|+||+|||||.||++.+|++||++++++
T Consensus 162 k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~ 241 (442)
T KOG1404|consen 162 KQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKV 241 (442)
T ss_pred cccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHH
Confidence 998876 5999999999999999987 567889999999988888999999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCc-ccccCCCChHHHH
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN-YFNTFGGNPVCTA 362 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~-~~~T~~~np~a~a 362 (447)
||++|+++|+||||||||||| +||++|.+|+.|||+||+|+||||+|||||++++||++.+.+.. |++||+|||++|+
T Consensus 242 v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~a 320 (442)
T KOG1404|consen 242 VRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACA 320 (442)
T ss_pred HHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhccccccccCCCchhHH
Confidence 999999999999999999999 99999999999999999999999999999999999999999876 9999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCC-CCCCCCHHHHHHHHHHHHhCCc
Q 013235 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDR-QLKTPAKAETLYIMDKMKGICA 441 (447)
Q Consensus 363 aala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~-~~~~p~~~~~~~~~~~l~~~Gv 441 (447)
+++++|++|+++++++++..+|.+|+++|.++.++|++|++|||+|||+|+|+++++ ..+.|+......+.++|+++||
T Consensus 321 vg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gv 400 (442)
T KOG1404|consen 321 VGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGV 400 (442)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCe
Confidence 999999999999999999999999999999999999999999999999999999998 5566777778889999999999
Q ss_pred eeec
Q 013235 442 LFFS 445 (447)
Q Consensus 442 lv~~ 445 (447)
+++.
T Consensus 401 lvg~ 404 (442)
T KOG1404|consen 401 LVGK 404 (442)
T ss_pred eeec
Confidence 9964
No 2
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-92 Score=704.80 Aligned_cols=388 Identities=40% Similarity=0.625 Sum_probs=353.9
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 013235 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (447)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~ 134 (447)
.++++..++++++.+++.++...+ ..|+++++++|+||||+|||+||||++|+++.++|||||+|++|+++|++++.|+
T Consensus 13 ~~~~~~~~~~~r~~~~~~r~~~~~-~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~ 91 (447)
T COG0160 13 APGPKALELIERREEALARSYGRF-RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHT 91 (447)
T ss_pred CCCcchHHHHHHHHHHhccccccc-cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcc
Confidence 346677889999999888875542 5699999999999999999999999999999999999999999999999999998
Q ss_pred cccccc-hHHHHHHHHHHHhCCC-CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCc-c
Q 013235 135 TVLYLN-HAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW-K 211 (447)
Q Consensus 135 ~~~~~~-~~~~elae~L~~~~~~-~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~-~ 211 (447)
...+.+ +...+++|+|.+.+|. ..++++|+|||+||||+|||+||.+|++..||+|.++|||+|.+++++|+.... +
T Consensus 92 ~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~ 171 (447)
T COG0160 92 HTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYK 171 (447)
T ss_pred cCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccc
Confidence 887765 9999999999999998 688999999999999999999999999999999999999999999999986543 3
Q ss_pred cccc--CCCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHc--cCCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 212 FNVV--QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~--~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
..+. ..+++++|+|++||++|+.+.+ ...+.+++.+.. ..++++||||+|||||+||++++|++||++|+++
T Consensus 172 ~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~ 251 (447)
T COG0160 172 AGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKL 251 (447)
T ss_pred cCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHH
Confidence 3332 2569999999999999875422 234556665543 3467999999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHH
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aa 363 (447)
|+|||++||+||||||||||| +||++|++|+.||||||||++|+|+|+|+|++++++++ .....|.+||+|||++||+
T Consensus 252 ~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aa 329 (447)
T COG0160 252 CREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAA 329 (447)
T ss_pred HHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999999 6667799999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 364 ala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
|+++|++|++++|++++.++|++|+++|.+|+++|+.|++|||+|+|+||||++++.++.|+.+.+.+++++|+++|+++
T Consensus 330 a~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil 409 (447)
T COG0160 330 ALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLL 409 (447)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ec
Q 013235 444 FS 445 (447)
Q Consensus 444 ~~ 445 (447)
.+
T Consensus 410 ~~ 411 (447)
T COG0160 410 LT 411 (447)
T ss_pred ec
Confidence 53
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-90 Score=671.92 Aligned_cols=357 Identities=37% Similarity=0.626 Sum_probs=332.1
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 013235 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~ 138 (447)
.++...+...+|+.+. |.+.|+++++|+|+|+||.+||+||||.+|+++++||||||+|++|+++|+++++|.++.|
T Consensus 5 ~~~~~~~~~~~~~~~~---Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~ 81 (404)
T COG4992 5 LTAATIELFMKYLMPT---YGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF 81 (404)
T ss_pred cHHHHHHHHHHhhhcc---cCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc
Confidence 3456677777787666 5567899999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcC---CCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG---CNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~---~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++...+|+++|++..| ..++|||+|||+||||+|||+||.|++ +.+||+|.++|||+|++++++|+++.|+..+.
T Consensus 82 ~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~ 160 (404)
T COG4992 82 YNEPQAELAEKLVELSP-FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFG 160 (404)
T ss_pred CChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCC
Confidence 99999999999999998 689999999999999999999999998 78999999999999999999999998887664
Q ss_pred C--CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 216 Q--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 216 ~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
+ +++.++|+ +| +++++++++. ++||||+|||||+||+++++++||+++++||++||+|||+
T Consensus 161 Pl~~g~~~vpf---------nD----i~al~~ai~~----~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~ 223 (404)
T COG4992 161 PLLPGFRHVPF---------ND----IEALEAAIDE----DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLIL 223 (404)
T ss_pred CCCCCceecCC---------CC----HHHHHHHhcc----CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEE
Confidence 3 68888875 34 7888888863 8999999999999999999999999999999999999999
Q ss_pred eccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh
Q 013235 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (447)
Q Consensus 294 DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~ 373 (447)
||||||+|||| ++|++||+|+.|||+|++|+||||+||||+++++++++.+..+.|++||+|||++||++.++|+++.+
T Consensus 224 DEVQtG~GRTG-k~fA~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~ 302 (404)
T COG4992 224 DEVQTGLGRTG-KLFAYEHYGVEPDILTLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE 302 (404)
T ss_pred eccccCCCccc-hHHHHHHhCCCCCEEEeeccccCCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc
Confidence 99999999999 89999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 374 DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 374 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++.++++++|++|+++|+++..+|+++.+|||+|||+|++|..+. .+..+++.|+++||++..
T Consensus 303 e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~--------~a~~~~~~~~~~gvL~~~ 366 (404)
T COG4992 303 EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY--------RARDIVRALREEGVLVLP 366 (404)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc--------cHHHHHHHHHHCCeEEec
Confidence 9999999999999999999999999999999999999999997542 256799999999999864
No 4
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2e-80 Score=616.64 Aligned_cols=380 Identities=34% Similarity=0.512 Sum_probs=336.7
Q ss_pred HHHhhhcCCccccc--cCC-CeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccc
Q 013235 65 AKRKTFLSPSLFHL--YSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLN 140 (447)
Q Consensus 65 ~~~~~~~~~~~~~~--~~~-p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~ 140 (447)
+...+|++...... +.. |.+|++|+|.||||.|||+|||.+||+|++++||+||+|.+|+.+|++++.|... .+.+
T Consensus 7 ~~d~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~ 86 (449)
T COG0161 7 AADLSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTH 86 (449)
T ss_pred hhhhhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCC
Confidence 33667776543322 222 8999999999999999999999999999999999999999999999999998754 4566
Q ss_pred hHHHHHHHHHHHhCC-CCCceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCcc-c
Q 013235 141 HAIADFAEALASKMP-GNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWK-F 212 (447)
Q Consensus 141 ~~~~elae~L~~~~~-~~~~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~-~ 212 (447)
.+..+|+++|+++.| +++++|||++|||||||.|||||+.|. +|+++|+.+++|||.|.+++|+++..... .
T Consensus 87 ~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~ 166 (449)
T COG0161 87 EPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHA 166 (449)
T ss_pred chHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhh
Confidence 779999999999999 669999999999999999999999883 46779999999999999999999943322 2
Q ss_pred --cccCCCeEeecCCCCcCCCCCC-ChH---HHHHHHHHHHHccCCCCeEEEEEccccCC-CceeeCCCChHHHHHHHHH
Q 013235 213 --NVVQTGVHHALNPDPYRGVFGA-DGE---MYAKDVQDLIDFGTSGHVAGFLSESIQGV-GGIIELAPGYLPAVYKSIK 285 (447)
Q Consensus 213 --~~~~~g~~~~~~p~~~~~~~~~-d~~---~~~~~le~~i~~~~~~~~aavi~Epi~~~-gG~~~~~~~~l~~l~~l~~ 285 (447)
.....++.+++.|+.|+.+... +.+ .++++||++|.++++++|||||+||+++. ||+++||++||++++++|+
T Consensus 167 ~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ 246 (449)
T COG0161 167 FYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICD 246 (449)
T ss_pred hccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHH
Confidence 2234678899999988876633 333 66889999999988899999999997777 9999999999999999999
Q ss_pred HhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC-----cccccCCCChH
Q 013235 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-----NYFNTFGGNPV 359 (447)
Q Consensus 286 ~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~-----~~~~T~~~np~ 359 (447)
+||+|||+|||.||||||| ++|+++++|++|||+|+||+|+|| +|+|+++++++|.+.+... .|+.||+|||+
T Consensus 247 ky~ILlI~DEV~tGFGRTG-~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPl 325 (449)
T COG0161 247 KYGILLIADEVATGFGRTG-KMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPL 325 (449)
T ss_pred HcCcEEEeecceeCCCcCc-hhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHH
Confidence 9999999999999999999 799999999999999999999999 5999999999999998764 48899999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHH-HHHHHHHHHHh
Q 013235 360 CTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKA-ETLYIMDKMKG 438 (447)
Q Consensus 360 a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~-~~~~~~~~l~~ 438 (447)
+||+|+++|++++++++++++++++.+|+++|+++..+++.+++|||.|+|.+||++.++.++.|... ...++.+.+++
T Consensus 326 acAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e 405 (449)
T COG0161 326 ACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALE 405 (449)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999997777899999999999999999999988877633 35678889999
Q ss_pred CCceeec
Q 013235 439 ICALFFS 445 (447)
Q Consensus 439 ~Gvlv~~ 445 (447)
+||++++
T Consensus 406 ~Gl~iRp 412 (449)
T COG0161 406 RGLLIRP 412 (449)
T ss_pred CCeEEee
Confidence 9999985
No 5
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-77 Score=618.29 Aligned_cols=383 Identities=30% Similarity=0.472 Sum_probs=329.5
Q ss_pred HHHHHHHhhhcCCccccc--c--CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 013235 61 DEILAKRKTFLSPSLFHL--Y--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~--~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 136 (447)
++++++.+++++.....+ + ..|+++++++|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~ 83 (459)
T PRK05965 4 NSLIELDRAHLIHPVASYRGHEARGVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATG 83 (459)
T ss_pred HHHHHhhhhccccccccccccccCCCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccc
Confidence 345555555654333211 1 247899999999999999999999999999999999999999999999999876544
Q ss_pred --cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCC
Q 013235 137 --LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQS 208 (447)
Q Consensus 137 --~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~ 208 (447)
.+.++...+|+++|++.+|.++++|+|+||||||||+|||+||.| ++|.+||+++++|||++.+++++++..
T Consensus 84 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~ 163 (459)
T PRK05965 84 YFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALP 163 (459)
T ss_pred ccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCc
Confidence 356888999999999999877899999999999999999999998 458899999999999999999998866
Q ss_pred Ccccccc--CCCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHH
Q 013235 209 NWKFNVV--QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (447)
Q Consensus 209 ~~~~~~~--~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~ 282 (447)
.++..+. ..++..++.|++++.++++|.+ .++++++++++...++++||||+||+||++|++++|++||++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~ 243 (459)
T PRK05965 164 AFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE 243 (459)
T ss_pred hhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHH
Confidence 5554332 2456677888888877766542 345678888876555799999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcC-------CcccccC
Q 013235 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR-------RNYFNTF 354 (447)
Q Consensus 283 l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~-------~~~~~T~ 354 (447)
+|++||++||+||||||||||| ++|+++++|++|||+|+||+|+||+ |+|++++++++++.+.. ..|++||
T Consensus 244 lc~~~gillI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~ 322 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTG-PLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTY 322 (459)
T ss_pred HHHHcCCEEEEechhccCccCc-hhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCC
Confidence 9999999999999999999999 7999999999999999999999995 99999999999988753 1478999
Q ss_pred CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCC---CHHHHHH
Q 013235 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP---AKAETLY 431 (447)
Q Consensus 355 ~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p---~~~~~~~ 431 (447)
+|||++|++++++|++++++++.++++++|++|+++|+++. +++.+++|||.|+|++|||++++..+.| ......+
T Consensus 323 ~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~ 401 (459)
T PRK05965 323 SAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADR 401 (459)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHH
Confidence 99999999999999999999999999999999999999986 6899999999999999999876544433 1234677
Q ss_pred HHHHHHhCCceeec
Q 013235 432 IMDKMKGICALFFS 445 (447)
Q Consensus 432 ~~~~l~~~Gvlv~~ 445 (447)
+.+.|+++||+++.
T Consensus 402 i~~~~~~~Gll~~~ 415 (459)
T PRK05965 402 IFDRAYANGLVFRA 415 (459)
T ss_pred HHHHHHhCCeEEEe
Confidence 89999999999864
No 6
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=2.9e-77 Score=615.12 Aligned_cols=385 Identities=31% Similarity=0.490 Sum_probs=335.0
Q ss_pred CHHHHHHHHhhhcCCcccccc-CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 013235 59 SADEILAKRKTFLSPSLFHLY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~ 137 (447)
++++++++.++++++....+. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~ 85 (451)
T PRK07678 6 QTDELLAKDEQYVWHGMKPYNPNATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLT 85 (451)
T ss_pred CHHHHHHHhhcccCCCccccccCCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccc
Confidence 466778777777655433233 2489999999999999999999999999999999999999999999999998776555
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCcc
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWK 211 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~ 211 (447)
+.++...+|+++|++.+|. .++|+|+||||||||.|||+||.|+ +|.+||+++++|||++.+++++++...++
T Consensus 86 ~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 164 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRK 164 (451)
T ss_pred cCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccc
Confidence 6788899999999999986 3689999999999999999999996 57899999999999999999998876554
Q ss_pred cccc--CCCeEeecCCCCcCCCCCCC----hHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHH
Q 013235 212 FNVV--QTGVHHALNPDPYRGVFGAD----GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIK 285 (447)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d----~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~ 285 (447)
..+. .+++..++.|+.++.+|+.+ ...+++.++++++...++++||||+||+||++|+++||++||++|+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 165 YKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred cccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 4332 36788888888888776432 12345667888864445799999999999999999999999999999999
Q ss_pred HhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC------cccccCCCCh
Q 013235 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR------NYFNTFGGNP 358 (447)
Q Consensus 286 ~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~------~~~~T~~~np 358 (447)
+||+++|+||||||||||| ++|+++++|++|||+||||+|||| +|+|++++++++++.+... .|++||+|||
T Consensus 245 ~~g~llI~DEV~tGfGRtG-~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp 323 (451)
T PRK07678 245 KHGALLISDEVICGFGRTG-KAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNP 323 (451)
T ss_pred HcCCEEEEeehhhcCCcCc-hhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCH
Confidence 9999999999999999999 799999999999999999999999 6999999999999988642 3789999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCC-CHHHHHHHHHHHH
Q 013235 359 VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP-AKAETLYIMDKMK 437 (447)
Q Consensus 359 ~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p-~~~~~~~~~~~l~ 437 (447)
++|++|+++|++++++++.++++++|++|+++|+++.++++.+.+|||.|+|++|+++++..++.| +...+.++++.|+
T Consensus 324 ~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~ 403 (451)
T PRK07678 324 AACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACK 403 (451)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHH
Confidence 999999999999999999999999999999999998889999999999999999999876554444 3455778999999
Q ss_pred hCCceeec
Q 013235 438 GICALFFS 445 (447)
Q Consensus 438 ~~Gvlv~~ 445 (447)
++||++..
T Consensus 404 ~~Gv~~~~ 411 (451)
T PRK07678 404 EKGLIIGK 411 (451)
T ss_pred HCCcEEee
Confidence 99999853
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-77 Score=614.41 Aligned_cols=385 Identities=30% Similarity=0.442 Sum_probs=330.3
Q ss_pred CHHHHHHHHhhhcCCcccc---cc---CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc
Q 013235 59 SADEILAKRKTFLSPSLFH---LY---SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~---~~---~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~ 132 (447)
+++++.++.+++++..... +. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~ 83 (461)
T PRK07482 4 KIDELLAWDRDHFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA 83 (461)
T ss_pred cHHHHHHhhhhhccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC
Confidence 5667777666665443221 11 23899999999999999999999999999999999999999999999999986
Q ss_pred cccc--cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhc
Q 013235 133 HSTV--LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGA 204 (447)
Q Consensus 133 ~~~~--~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~ 204 (447)
|... .+.++...+|+++|++..|.++++|+|+||||||||+|||+||.++ +|++||+++++|||++.+++++
T Consensus 84 ~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~ 163 (461)
T PRK07482 84 YYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSL 163 (461)
T ss_pred ccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhc
Confidence 5432 4678999999999999998778999999999999999999999873 5889999999999999999999
Q ss_pred cCCCCcccccc--CCCeEeecCCCCcCCCCCC-Ch----HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChH
Q 013235 205 TAQSNWKFNVV--QTGVHHALNPDPYRGVFGA-DG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (447)
Q Consensus 205 t~~~~~~~~~~--~~g~~~~~~p~~~~~~~~~-d~----~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l 277 (447)
++.+.++..+. ..++.+++.|+.+++++.. .. ..+++.+++++....++++||||+||+||++|++++|++||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl 243 (461)
T PRK07482 164 TGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYW 243 (461)
T ss_pred cCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHH
Confidence 98766554332 3577788888776654311 11 22467788888654557899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcC-------Cc
Q 013235 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR-------RN 349 (447)
Q Consensus 278 ~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~-------~~ 349 (447)
++|+++|++||++||+||||||||||| ++|+++++|++|||+|+||+|+||+ |+|++++++++++.+.. ..
T Consensus 244 ~~lr~lc~~~giLlI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 322 (461)
T PRK07482 244 PAIQAVLKKYDILLIADEVVTGFGRLG-SMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIG 322 (461)
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCc-chhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccc
Confidence 999999999999999999999999999 7999999999999999999999996 99999999999988752 14
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCH---
Q 013235 350 YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK--- 426 (447)
Q Consensus 350 ~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~--- 426 (447)
|.+||+|||++|++|+++|++++++++.++++++|++|+++|+++.++++.+.+|||.|+|++|||++++.++.|..
T Consensus 323 h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~ 402 (461)
T PRK07482 323 HGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPAL 402 (461)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhh
Confidence 77999999999999999999999999999999999999999999999999999999999999999987654444421
Q ss_pred HHHHHHHHHHHhCCceee
Q 013235 427 AETLYIMDKMKGICALFF 444 (447)
Q Consensus 427 ~~~~~~~~~l~~~Gvlv~ 444 (447)
..+.++++.|+++||++.
T Consensus 403 ~~~~~i~~~~~~~Gvl~~ 420 (461)
T PRK07482 403 KIGPQVSAAALERGVIAR 420 (461)
T ss_pred HHHHHHHHHHHHCCcEEe
Confidence 235788999999999984
No 8
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-76 Score=608.90 Aligned_cols=384 Identities=33% Similarity=0.513 Sum_probs=332.9
Q ss_pred HHHHHHHHhhhcCCccccc-cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 013235 60 ADEILAKRKTFLSPSLFHL-YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~ 138 (447)
+.+.++...+++++..... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+....+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~ 92 (451)
T PRK06062 13 GARAYALDRAHVFHSWSAQGKINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAH 92 (451)
T ss_pred hHHHHHhhhhhccccccccccCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCcc
Confidence 3455666566655443321 235899999999999999999999999999999999999999999999999988766677
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc-CC
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV-QT 217 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~-~~ 217 (447)
.++...+|+++|++..|.++++|+|+||||||||.|||+||.+|+|.+||+++++|||++.+++++++.+.++...+ ..
T Consensus 93 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~ 172 (451)
T PRK06062 93 ANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRA 172 (451)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCC
Confidence 89999999999999998778899999999999999999999999999999999999999999999987654332222 25
Q ss_pred CeEeecCCCCcCCCCC--CCh---HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEE
Q 013235 218 GVHHALNPDPYRGVFG--ADG---EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 218 g~~~~~~p~~~~~~~~--~d~---~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
++..++.|++++.+|. +|. ..++++++++++...++++|+||+||+||++|+++||++||++|+++|++||++||
T Consensus 173 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI 252 (451)
T PRK06062 173 GVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLI 252 (451)
T ss_pred CCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 7788888888887763 332 23467788888754457899999999999999999999999999999999999999
Q ss_pred EeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcCC--cccccCCCChHHHHHHHHHHH
Q 013235 293 ADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 293 ~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~~--~~~~T~~~np~a~aaala~L~ 369 (447)
+|||||||||+| .+|+++++|+.|||+||||+||||+ |+|++++++++++.+... .|.+||+|||++|++++++|+
T Consensus 253 ~DEV~tGfGRtG-~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 331 (451)
T PRK06062 253 ADEVMAGFGRTG-KWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATIN 331 (451)
T ss_pred eeccccCCCcCc-HHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999 7999999999999999999999995 999999999999988643 477899999999999999999
Q ss_pred HHhhhhHHHHHHHHH-HHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC------HHHHHHHHHHHHhCCce
Q 013235 370 VIQKDKLQNNAHVVG-SYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA------KAETLYIMDKMKGICAL 442 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g-~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~------~~~~~~~~~~l~~~Gvl 442 (447)
+|+++++.++++++| ++|+++|+++.++++.+.+|||.|+|++|+|++++.++.|. ...+.++++.|+++||+
T Consensus 332 ~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl 411 (451)
T PRK06062 332 AMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLL 411 (451)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcE
Confidence 999999999999999 69999999999999999999999999999998654433331 12456899999999999
Q ss_pred ee
Q 013235 443 FF 444 (447)
Q Consensus 443 v~ 444 (447)
+.
T Consensus 412 ~~ 413 (451)
T PRK06062 412 PF 413 (451)
T ss_pred Ee
Confidence 75
No 9
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-76 Score=605.24 Aligned_cols=384 Identities=29% Similarity=0.455 Sum_probs=324.1
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc-ccccc
Q 013235 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTVL 137 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~ 137 (447)
+.++++++..++...........|+++++|+|+||||.|||+||||++|++++++||+||+|++|+++|+++.. +....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~ 102 (464)
T PRK06938 23 SNSPLLERQSRRESNARSYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLD 102 (464)
T ss_pred cHHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccc
Confidence 34567777655532211111245899999999999999999999999999999999999999999999997533 33334
Q ss_pred ccchHHHHHHHHHHHhCCCCC---ceEEEc-CCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccc
Q 013235 138 YLNHAIADFAEALASKMPGNL---KVVFFT-NSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~---~~v~~~-~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~ 213 (447)
+.++...+|+++|.+.+|..+ ++++|+ ||||||||.|||+||.+|+|++||+++++|||++.+++++++...++..
T Consensus 103 ~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~ 182 (464)
T PRK06938 103 LTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKP 182 (464)
T ss_pred cCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCcccccc
Confidence 678999999999999998654 256665 8999999999999999999999999999999999999999886544433
Q ss_pred cc--CCCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHH
Q 013235 214 VV--QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIK 285 (447)
Q Consensus 214 ~~--~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~ 285 (447)
+. .+++.++++|+.++.+++.+.+ .+++.++++++.. .++++||||+||+||++|+++||++||++|+++|+
T Consensus 183 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~ 262 (464)
T PRK06938 183 LGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE 262 (464)
T ss_pred CCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 22 2467788888877776654322 3467788888642 23589999999999999999999999999999999
Q ss_pred HhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHH
Q 013235 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGH 365 (447)
Q Consensus 286 ~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaal 365 (447)
+||++||+||||||||||| ++|+++++|++|||+|+||+|+||+|+|++++++++ +.+....|.+||+|||++|++|+
T Consensus 263 ~~giLlI~DEV~tGfGRtG-~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~ 340 (464)
T PRK06938 263 EAGIPLIVDEIQSGFGRTG-KMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGS 340 (464)
T ss_pred HcCCEEEEeccccCCCcCc-HHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHH
Confidence 9999999999999999999 799999999999999999999999999999999886 66655568899999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCC-----CC-CHHHHHHHHHHHHhC
Q 013235 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK-----TP-AKAETLYIMDKMKGI 439 (447)
Q Consensus 366 a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~-----~p-~~~~~~~~~~~l~~~ 439 (447)
++|+++++++++++++++|++|+++|+++.++++.+.+|||.|+|++++|++++.++ .| +...+..+++.|+++
T Consensus 341 a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (464)
T PRK06938 341 ATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRR 420 (464)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999999999999999998654321 22 234567789999999
Q ss_pred Cceee
Q 013235 440 CALFF 444 (447)
Q Consensus 440 Gvlv~ 444 (447)
||++.
T Consensus 421 Gll~~ 425 (464)
T PRK06938 421 GLILE 425 (464)
T ss_pred CeEEe
Confidence 99985
No 10
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-76 Score=606.06 Aligned_cols=364 Identities=32% Similarity=0.559 Sum_probs=321.6
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc--cccchHHHHHHHHHHHhC-CCC
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV--LYLNHAIADFAEALASKM-PGN 157 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~--~~~~~~~~elae~L~~~~-~~~ 157 (447)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+++|++++.|.+. .+.++...+|+++|++.+ |.+
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 103 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG 103 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999999999999999999999876543 357899999999999998 455
Q ss_pred CceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcC
Q 013235 158 LKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYR 229 (447)
Q Consensus 158 ~~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~ 229 (447)
+++|+|++|||||||+|||+||.|+ +|.+||+++++|||++.+++++++...++..+. .+++..++.|+.++
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYR 183 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccc
Confidence 7899999999999999999999985 688999999999999999999988665543322 36788888898888
Q ss_pred CCCC-CChHH----HHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccC
Q 013235 230 GVFG-ADGEM----YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (447)
Q Consensus 230 ~~~~-~d~~~----~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G 304 (447)
.+|+ .|.+. +.+.+|+++....++++||||+||+||++|++++|++||++|+++|++||+++|+|||||||||||
T Consensus 184 ~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (449)
T PRK07481 184 NPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG 263 (449)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc
Confidence 8886 34333 345567777644467999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC-------cccccCCCChHHHHHHHHHHHHHhhhhH
Q 013235 305 SHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNTFGGNPVCTAAGHAVLKVIQKDKL 376 (447)
Q Consensus 305 ~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~-------~~~~T~~~np~a~aaala~L~~i~~~~l 376 (447)
++|+++++|++|||+|+||+++|| +|+|++++++++++.+... .|.+||+|||++|++|+++|++++++++
T Consensus 264 -~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l 342 (449)
T PRK07481 264 -SWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDL 342 (449)
T ss_pred -hhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 799999999999999999999999 5999999999999988532 4779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC---HHHHHHHHHHHHhCCceeec
Q 013235 377 QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 377 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~---~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.++++++|++|+++|+++.++++++.+|||.|+|++++|++++.++.|. .....++.+.|+++||++.+
T Consensus 343 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 414 (449)
T PRK07481 343 PANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRP 414 (449)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEe
Confidence 9999999999999999999999999999999999999998665444342 23567789999999999864
No 11
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-75 Score=601.65 Aligned_cols=364 Identities=32% Similarity=0.527 Sum_probs=318.5
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCC
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNL 158 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~ 158 (447)
..|+++++|+|+||||.|||+||||++|++++++||+||+|.+|+++|++++.+... .+.++...+|+++|++.+|.++
T Consensus 11 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 90 (443)
T PRK07483 11 ATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGL 90 (443)
T ss_pred CCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 458999999999999999999999999999999999999999999999999865443 3568889999999999998778
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCC
Q 013235 159 KVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRG 230 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~ 230 (447)
++|+|+||||||||+|||+||.+ ++|.+||+|+++|||++.+++++++...++..+. ..++.+++.|..|+.
T Consensus 91 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~ 170 (443)
T PRK07483 91 EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRE 170 (443)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccc
Confidence 89999999999999999999998 6789999999999999999999998654443322 246677777766765
Q ss_pred CCCC-C----hHHHHHHHHHHHHccCCCCeEEEEEccccC-CCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccC
Q 013235 231 VFGA-D----GEMYAKDVQDLIDFGTSGHVAGFLSESIQG-VGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (447)
Q Consensus 231 ~~~~-d----~~~~~~~le~~i~~~~~~~~aavi~Epi~~-~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G 304 (447)
.+.. + .+.+++++++++....++++||||+||||| .+|++++|++||++|+++|++||+++|+|||||||||||
T Consensus 171 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG 250 (443)
T PRK07483 171 QRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG 250 (443)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc
Confidence 4321 1 122456777767654457999999999999 589999999999999999999999999999999999999
Q ss_pred CCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcCC----cccccCCCChHHHHHHHHHHHHHhhhhHHHH
Q 013235 305 SHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR----NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNN 379 (447)
Q Consensus 305 ~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~~----~~~~T~~~np~a~aaala~L~~i~~~~l~~~ 379 (447)
++|+++++|++|||+|+||+|+||+ |+|++++++++++.+... .|.+||+|||++|++++++|++|+++++.++
T Consensus 251 -~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~ 329 (443)
T PRK07483 251 -TLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLAN 329 (443)
T ss_pred -HHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 7999999999999999999999996 999999999999988643 4779999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC---HHHHHHHHHHHHhCCceee
Q 013235 380 AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKGICALFF 444 (447)
Q Consensus 380 ~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~---~~~~~~~~~~l~~~Gvlv~ 444 (447)
++++|++|+++|+++.++++.+.+|||.|+|++|+|++++.++.|. ......+.+.|+++||++.
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 397 (443)
T PRK07483 330 VRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVY 397 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEE
Confidence 9999999999999999999999999999999999998765444442 2345678999999999985
No 12
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-75 Score=601.62 Aligned_cols=382 Identities=32% Similarity=0.498 Sum_probs=322.7
Q ss_pred HHHHHHHHhhhcCCccccc-cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc-cccc
Q 013235 60 ADEILAKRKTFLSPSLFHL-YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVL 137 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~ 137 (447)
.++++++..++.... ..+ ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|+++..+ .+..
T Consensus 19 ~~~~~~~~~~~~~~~-~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~ 97 (459)
T PRK06931 19 NETYLARQAEFESNV-RSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLD 97 (459)
T ss_pred hHHHHHHHHhhhhhc-cccccCCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccc
Confidence 446677666553221 112 2458999999999999999999999999999999999999999999999987432 2234
Q ss_pred ccchHHHHHHHHHHHhCCCCC---ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 138 YLNHAIADFAEALASKMPGNL---KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~---~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
+.++...+|+++|++.+|... ..+||+||||||||.|||+||.+|+|.+||+++++|||++.+++++++...++..+
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~ 177 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV 177 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCC
Confidence 578888999999999998542 35677799999999999999999999999999999999999999998866554333
Q ss_pred c--CCCeEeecCCCCcCCCCCCCh----HHHHHHHHHHHHc--cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH
Q 013235 215 V--QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK 286 (447)
Q Consensus 215 ~--~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~--~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~ 286 (447)
. .+++.++++|+.++.+|+... +.+.+.+++.++. ..++++||||+||+||++|++++|++||++|+++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~ 257 (459)
T PRK06931 178 NGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK 257 (459)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 2 367888999999988886332 2233334555542 1346899999999999999999999999999999999
Q ss_pred hCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHH
Q 013235 287 AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHA 366 (447)
Q Consensus 287 ~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala 366 (447)
||+++|+||||||||||| ++|+++++|++|||+|+||+|+||+|+|++++++++ +.+....|.+||+|||++|++|++
T Consensus 258 ~g~LlI~DEV~tGfGRtG-~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala 335 (459)
T PRK06931 258 HGILLIVDEVQAGFARTG-KMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLT 335 (459)
T ss_pred cCCEEEEecchhcCCcCc-hHHHhhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999 799999999999999999999999999999988775 767656688999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCC-----CC-CHHHHHHHHHHHHhCC
Q 013235 367 VLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK-----TP-AKAETLYIMDKMKGIC 440 (447)
Q Consensus 367 ~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~-----~p-~~~~~~~~~~~l~~~G 440 (447)
+|++++++++.++++++|++|+++|+++.++++.+.+|||.|+|++|||++++..+ .+ +...+.++++.|+++|
T Consensus 336 ~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 415 (459)
T PRK06931 336 TLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENG 415 (459)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999998654321 12 2345678899999999
Q ss_pred ceee
Q 013235 441 ALFF 444 (447)
Q Consensus 441 vlv~ 444 (447)
|++.
T Consensus 416 vl~~ 419 (459)
T PRK06931 416 LLLE 419 (459)
T ss_pred cEEe
Confidence 9985
No 13
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-75 Score=598.54 Aligned_cols=386 Identities=30% Similarity=0.466 Sum_probs=331.8
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 013235 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (447)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~ 134 (447)
.+.+++.+++++..+++.+... ....|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+++|++++.+.
T Consensus 10 ~~~~~s~~~~~~~~~~~~~~~~-~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~ 88 (457)
T PRK05639 10 PPGPKAKELIEREKRVLSPGIG-VKLFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHS 88 (457)
T ss_pred CCCCCHHHHHHHHHHhhccccC-cCCCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccc
Confidence 3456777888777777655431 123589999999999999999999999999999999999999999999999998765
Q ss_pred ccc-ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCC-CCccc
Q 013235 135 TVL-YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKF 212 (447)
Q Consensus 135 ~~~-~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~-~~~~~ 212 (447)
... +.++...+|+++|++.+|.+.++|+|+||||||||+|+|+||.+|+|.+||+++++|||++.+++++++. ..++.
T Consensus 89 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~ 168 (457)
T PRK05639 89 MIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKR 168 (457)
T ss_pred ccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCccccc
Confidence 443 3467889999999999987678999999999999999999999999999999999999999999998864 22333
Q ss_pred ccc--CCCeEeecCCCCcCCCCCC----ChHH----HHHHHHHHHHc--cCCCCeEEEEEccccCCCceeeCCCChHHHH
Q 013235 213 NVV--QTGVHHALNPDPYRGVFGA----DGEM----YAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAV 280 (447)
Q Consensus 213 ~~~--~~g~~~~~~p~~~~~~~~~----d~~~----~~~~le~~i~~--~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l 280 (447)
.+. .+++..+++|++++.+|.. +.+. +++.+++.+.. ..++++||||+||+||++|+++||++||++|
T Consensus 169 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l 248 (457)
T PRK05639 169 GFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKEL 248 (457)
T ss_pred CCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHH
Confidence 222 2578888998888766542 2222 34556666532 1357999999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHH
Q 013235 281 YKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVC 360 (447)
Q Consensus 281 ~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a 360 (447)
+++|++||+++|+|||||||||+| .+|+++++|+.|||+||||+|+||+|+|++++++++++ +....+.+||++||++
T Consensus 249 ~~lc~~~g~llI~DEv~tG~GrtG-~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~-~~~~~~~~T~~g~p~~ 326 (457)
T PRK05639 249 KKLLDEHGILLVMDEVQTGIGRTG-KWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMD-LTSGSALLTPAANPVI 326 (457)
T ss_pred HHHHHHcCCEEEEechhhccCcCc-hHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHh-hcCCCcccCCCcCHHH
Confidence 999999999999999999999999 79999999999999999999999999999999999999 4344577999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCC
Q 013235 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGIC 440 (447)
Q Consensus 361 ~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~G 440 (447)
|++++++|++++++++.++++++|++|+++|+++.++++++.+|||.|+|+++++.++.. .|+...+..+++.|+++|
T Consensus 327 ~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~--~~~~~~~~~~~~~~~~~G 404 (457)
T PRK05639 327 SAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG--KPDPELTGKICWRAFELG 404 (457)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC--CCCHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999986532 345556778999999999
Q ss_pred ceeec
Q 013235 441 ALFFS 445 (447)
Q Consensus 441 vlv~~ 445 (447)
|++..
T Consensus 405 v~~~~ 409 (457)
T PRK05639 405 LILPS 409 (457)
T ss_pred eEEee
Confidence 99863
No 14
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.6e-75 Score=597.88 Aligned_cols=362 Identities=32% Similarity=0.535 Sum_probs=312.5
Q ss_pred HHHHHHHHhhhcCCccccccCC---------CeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHh
Q 013235 60 ADEILAKRKTFLSPSLFHLYSK---------PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~ 130 (447)
.++.++++++++.+.+ ..|.. ++++++++|+||||.|||+||||++|++++++||+||+|++|+.+|+++
T Consensus 28 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~ 106 (442)
T TIGR03372 28 NQEVIECFKEHVNPGF-LEYRKSVTAGGDYGAVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAK 106 (442)
T ss_pred cHHHHHHHhhccCHHH-HHHHHhhhccCCCCeeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHh
Confidence 3466777777765543 11211 3345677789999999999999999999999999999999999999999
Q ss_pred cccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc---CCCeEEEEcCCcccCchhhhhccCC
Q 013235 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---GCNDIISLRNAYHGNAAGTMGATAQ 207 (447)
Q Consensus 131 ~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t---~~~~ii~~~~~yHG~~~~~~~~t~~ 207 (447)
+.+.+..+.++...+|+|+|++.+|.++++++|+||||||||+|+|+||.++ ||.+||+++++|||++.+++++++.
T Consensus 107 l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~ 186 (442)
T TIGR03372 107 QPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAK 186 (442)
T ss_pred CCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCC
Confidence 8776655668999999999999999878899999999999999999999996 8899999999999999999999886
Q ss_pred CCcccccc--CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc--cCCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 208 SNWKFNVV--QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 208 ~~~~~~~~--~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~--~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
+.++..+. .+++.++++|+ .+++++.++. ..++++|+||+||+||++|+++||++||++|+++
T Consensus 187 ~~~~~~~~p~~~~~~~~p~~d-------------~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~l 253 (442)
T TIGR03372 187 PAFRKPFMPLLPGFHHVAFGD-------------IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRAL 253 (442)
T ss_pred cccCCCCCCCCCCCEEeCCCC-------------HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHH
Confidence 65543322 25666776543 2334444432 1246899999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcC--CcccccCCCChHH
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVC 360 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~--~~~~~T~~~np~a 360 (447)
|++||+++|+||||||||||| ++|+++++|+.|||+||||+|||| +|+|++++++++++.+.. ..|++||+|||++
T Consensus 254 c~~~g~llI~DEV~tG~GRtG-~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~ 332 (442)
T TIGR03372 254 CDEFGALLILDEVQTGMGRTG-KMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLA 332 (442)
T ss_pred HHHcCCEEEEeecccCCCccc-cchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHH
Confidence 999999999999999999999 799999999999999999999999 699999999999998843 3578999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC
Q 013235 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI 439 (447)
Q Consensus 361 ~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~ 439 (447)
|++++++|+++++++++++++++|++|+++|+++.++++ .+.+|||.|+|++|+|.++ .....+++.|+++
T Consensus 333 ~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~--------~~~~~i~~~l~~~ 404 (442)
T TIGR03372 333 CAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN--------EIGYAFAKELFQQ 404 (442)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh--------HHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999998 7899999999999999753 2356799999999
Q ss_pred Cceee
Q 013235 440 CALFF 444 (447)
Q Consensus 440 Gvlv~ 444 (447)
||++.
T Consensus 405 Gvl~~ 409 (442)
T TIGR03372 405 NILVA 409 (442)
T ss_pred CcEEe
Confidence 99985
No 15
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9.4e-75 Score=597.26 Aligned_cols=385 Identities=24% Similarity=0.393 Sum_probs=327.5
Q ss_pred CCHHHHHHHHhhhcCCcccc---cc-C-CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc
Q 013235 58 PSADEILAKRKTFLSPSLFH---LY-S-KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~---~~-~-~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~ 132 (447)
+..+++.+...++++..... ++ . .|+.+++|+|+||||.|||+||||++|++++++||+||+|.+|+.+|++++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~ 97 (472)
T PRK08742 18 QTAEHWRQRDLAVLWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELE 97 (472)
T ss_pred CcHHHHHHhhhcccccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCC
Confidence 44567777666665433222 11 1 2578999999999999999999999999999999999999999999999887
Q ss_pred cccc-cccchHHHHHHHHHHHhCCC-----CCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchh
Q 013235 133 HSTV-LYLNHAIADFAEALASKMPG-----NLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAG 200 (447)
Q Consensus 133 ~~~~-~~~~~~~~elae~L~~~~~~-----~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~ 200 (447)
+.+. .+.++...+|+++|.+.+|. ++++|+|+||||||||+|||+||.| ++|.+||+++++|||++.+
T Consensus 98 ~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~g 177 (472)
T PRK08742 98 QVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIG 177 (472)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchh
Confidence 6544 46788899999999999975 4679999999999999999999998 5688999999999999999
Q ss_pred hhhccCCCCccccccC--CCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCCeEEEEEcc-ccCCCceeeCC
Q 013235 201 TMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELA 273 (447)
Q Consensus 201 ~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~aavi~Ep-i~~~gG~~~~~ 273 (447)
++++++...++..+.+ .++.+++.|+.++.+++...+ .+++.++++++. .++++||||+|| +||+||++++|
T Consensus 178 als~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iAAvI~EPviqg~gG~~~~p 256 (472)
T PRK08742 178 ALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ-SPGEICALILEPRLQCAGGMRMHH 256 (472)
T ss_pred hhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEccccccCCCcccCC
Confidence 9999886655543322 567888888888776654332 245677777764 356999999999 79999999999
Q ss_pred CChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcC-----
Q 013235 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR----- 347 (447)
Q Consensus 274 ~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~----- 347 (447)
++||++|+++|++||++||+||||||||||| ++|+++++|++|||+|+||+|+||+ |+|++++++++++.+..
T Consensus 257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG-~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~ 335 (472)
T PRK08742 257 PAYLRRARELCDAHGAFLIADEIATGFGRTG-TLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRER 335 (472)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCCCc-cchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccC
Confidence 9999999999999999999999999999999 7999999999999999999999995 99999999999998752
Q ss_pred -CcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC-
Q 013235 348 -RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA- 425 (447)
Q Consensus 348 -~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~- 425 (447)
..|.+||+|||++|++++++|++++++++.++++++|++|++.++.+ ++++.+++|||.|+|++|||+.++.++.|.
T Consensus 336 ~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~ 414 (472)
T PRK08742 336 AFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKRTPFP 414 (472)
T ss_pred ccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCccccccCC
Confidence 13789999999999999999999999999999999999999777765 668999999999999999998765554442
Q ss_pred --HHHHHHHHHHHHhCCceeec
Q 013235 426 --KAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 426 --~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.....++.+.|+++||++.+
T Consensus 415 ~~~~~~~~~~~~~~~~Gll~~~ 436 (472)
T PRK08742 415 PAARVGLHAYRAALARGVVLRP 436 (472)
T ss_pred chhHHHHHHHHHHHHCCeEEEe
Confidence 22356788999999999864
No 16
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.3e-74 Score=596.44 Aligned_cols=385 Identities=29% Similarity=0.453 Sum_probs=332.2
Q ss_pred CCHHHHHHHHhhhcCCccc---cc-cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc
Q 013235 58 PSADEILAKRKTFLSPSLF---HL-YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH 133 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~---~~-~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~ 133 (447)
.+++++.++++++++.... .+ ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~ 90 (460)
T PRK06916 11 YTYEELSEKNKAYVWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH 90 (460)
T ss_pred CChHHHHHHHhhccccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC
Confidence 4456788877777654332 12 1458999999999999999999999999999999999999999999999999877
Q ss_pred ccc-cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccC
Q 013235 134 STV-LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATA 206 (447)
Q Consensus 134 ~~~-~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~ 206 (447)
.+. .+.++...+|+++|++.+|.++++|+|+||||||||.|||+||.+ |+|++||+|+++|||++.+++++++
T Consensus 91 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~ 170 (460)
T PRK06916 91 STLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGA 170 (460)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccC
Confidence 654 457889999999999999877789999999999999999999985 6789999999999999999999998
Q ss_pred CCCcccccc--CCCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCCeEEEEEcc-ccCCCceeeCCCChHHH
Q 013235 207 QSNWKFNVV--QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPA 279 (447)
Q Consensus 207 ~~~~~~~~~--~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~aavi~Ep-i~~~gG~~~~~~~~l~~ 279 (447)
...++..+. ..++..+++|+.++.+++.+.+ .++++++++++. .++++||||+|| |||++|++++|++||++
T Consensus 171 ~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~ 249 (460)
T PRK06916 171 IDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE-KHEEIAAIIVEPLVQGAGGMITMPKGYLKG 249 (460)
T ss_pred CcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcccCCHHHHHH
Confidence 665554332 2567788888888776654432 345677888864 356999999999 79999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcC-------Cccc
Q 013235 280 VYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYF 351 (447)
Q Consensus 280 l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~-------~~~~ 351 (447)
|+++|++||+++|+|||||||||+| ++|+++++|+.|||+|+||+|+|| +|+|++++++++++.+.. ..|.
T Consensus 250 lr~lc~~~g~llI~DEV~TG~GRtG-~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~ 328 (460)
T PRK06916 250 LRNLCTKYNVLFITDEVATGFGRTG-KMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHG 328 (460)
T ss_pred HHHHHHHcCCEEEeechhhCCCcCc-hhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccC
Confidence 9999999999999999999999999 799999999999999999999999 599999999999987742 2377
Q ss_pred ccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC---HHH
Q 013235 352 NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAE 428 (447)
Q Consensus 352 ~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~---~~~ 428 (447)
+||+|||++|++++++|++++++++++++++++++|++.|+++.+ ++.+++|||.|+|++++|++++.++.|. ...
T Consensus 329 ~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~ 407 (460)
T PRK06916 329 HSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKETKEPFEWTERV 407 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeecCCceeeEEeecccccccCCCchhhH
Confidence 899999999999999999999999999999999999999999965 8899999999999999998766554442 223
Q ss_pred HHHHHHHHHhCCceeec
Q 013235 429 TLYIMDKMKGICALFFS 445 (447)
Q Consensus 429 ~~~~~~~l~~~Gvlv~~ 445 (447)
..++++.|+++||++.+
T Consensus 408 ~~~i~~~~~~~Gvl~~~ 424 (460)
T PRK06916 408 GVQVCKRSRELGMLTRP 424 (460)
T ss_pred HHHHHHHHHHCCeEEEe
Confidence 46789999999999864
No 17
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-74 Score=596.62 Aligned_cols=361 Identities=25% Similarity=0.420 Sum_probs=317.8
Q ss_pred CeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCCce
Q 013235 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLKV 160 (447)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~~~ 160 (447)
|+++++++|+||||.|||+||||++|++++++||+||+|.+|+++|++++.+.+. .+.++...+|+++|++.+|.++++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 4789999999999999999999999999999999999999999999999877554 567899999999999999877889
Q ss_pred EEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCCCC
Q 013235 161 VFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGVF 232 (447)
Q Consensus 161 v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~~~ 232 (447)
|+|+||||||||.|||+||.+ |+|.+||+++++|||++.+++++++...++..+. ..++.++++|+.++.++
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 189 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPE 189 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccccc
Confidence 999999999999999999987 5788999999999999999999988665543322 25677888888877666
Q ss_pred CCChH----HHHHHHHHHHHccCCCCeEEEEEcc-ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCc
Q 013235 233 GADGE----MYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF 307 (447)
Q Consensus 233 ~~d~~----~~~~~le~~i~~~~~~~~aavi~Ep-i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~ 307 (447)
+.+.+ .++++++++++. .++++||||+|| +||++|++++|++||++|+++|++||+++|+||||||||||| ++
T Consensus 190 ~~~~~~~~~~~l~~le~~~~~-~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG-~~ 267 (466)
T PRK07030 190 GMSWEEHSRRMFAHMEQTLAE-HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG-TM 267 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc-cc
Confidence 54432 235667888864 357999999999 799999999999999999999999999999999999999999 79
Q ss_pred ccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcC-------CcccccCCCChHHHHHHHHHHHHHhhhhHHHH
Q 013235 308 WGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNN 379 (447)
Q Consensus 308 ~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~-------~~~~~T~~~np~a~aaala~L~~i~~~~l~~~ 379 (447)
|+++++|++|||+||||+|+|| +|+|++++++++++.+.. ..|.+||+|||++|++++++|++++++++.++
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~ 347 (466)
T PRK07030 268 FACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIEN 347 (466)
T ss_pred hHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 9999999999999999999999 599999999999998742 24789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC---HHHHHHHHHHHHhCCceeec
Q 013235 380 AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 380 ~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~---~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++++|++|+++|+++. +++.+.+|||.|+|++|++++++.++.|. .....++.+.|+++||++.+
T Consensus 348 ~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~ 415 (466)
T PRK07030 348 NRALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRP 415 (466)
T ss_pred HHHHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEe
Confidence 9999999999999995 68999999999999999998765544332 22346789999999999864
No 18
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.6e-74 Score=594.17 Aligned_cols=379 Identities=25% Similarity=0.383 Sum_probs=323.6
Q ss_pred HHHHHHHhhhcCCcccc---cc-CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 013235 61 DEILAKRKTFLSPSLFH---LY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~---~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 136 (447)
+++.++.+++++..... +. ..|+++++++|+||||.|||+||||.+|++++++||+||+|.+|+++|++++.|...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~ 91 (453)
T PRK06943 12 DDWVARSLRAVWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML 91 (453)
T ss_pred hhHHHHhhcccccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 45666666665433221 22 248999999999999999999999999999999999999999999999999877544
Q ss_pred -cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 137 -LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 137 -~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
.+.++...+|+++|++..|..+++|+|+||||||||.|||+||.+ ++|.+||+++++|||++.+++++++...
T Consensus 92 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~ 171 (453)
T PRK06943 92 AGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVAL 171 (453)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChh
Confidence 467889999999999999876789999999999999999999765 4688999999999999999999998765
Q ss_pred ccccccC--CCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCCeEEEEEcc-ccCCCceeeCCCChHHHHHH
Q 013235 210 WKFNVVQ--TGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYK 282 (447)
Q Consensus 210 ~~~~~~~--~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~aavi~Ep-i~~~gG~~~~~~~~l~~l~~ 282 (447)
++..+.+ .++..++.|+.++.++....+ .++++++++++.. ++++||||+|| +||++|++++|++||++|++
T Consensus 172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~ 250 (453)
T PRK06943 172 FKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER-AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRA 250 (453)
T ss_pred hhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC-CCceEEEEEeccccccCCcccCCHHHHHHHHH
Confidence 5544322 466778888766655443221 2356778888643 56999999999 59999999999999999999
Q ss_pred HHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC------cccccCC
Q 013235 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR------NYFNTFG 355 (447)
Q Consensus 283 l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~------~~~~T~~ 355 (447)
+|++||++||+||||||||||| ++|+++++|++|||+|+||+|+|| +|+|++++++++++.+... .|.+||+
T Consensus 251 lc~~~gillI~DEV~TG~GRtG-~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 251 LCDRYGVHLIADEIAVGCGRTG-TFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHHHcCCEEEeechhhCCCCCc-chhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 9999999999999999999999 799999999999999999999999 5999999999999988531 3789999
Q ss_pred CChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHH
Q 013235 356 GNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK 435 (447)
Q Consensus 356 ~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~ 435 (447)
|||++|++++++|++++++++.++++++|++|+++|+++. +++.+.+|||.|+|++++|+.++ .+......++.+.
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~---~~~~~~~~~i~~~ 405 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDG---DAARTFSRRFFEA 405 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCC---CcchHHHHHHHHH
Confidence 9999999999999999999999999999999999999985 57889999999999999998542 2333346788999
Q ss_pred HHhCCceeec
Q 013235 436 MKGICALFFS 445 (447)
Q Consensus 436 l~~~Gvlv~~ 445 (447)
|+++||++.+
T Consensus 406 ~~~~Gll~~~ 415 (453)
T PRK06943 406 ALERELLLRP 415 (453)
T ss_pred HHHCCcEEEe
Confidence 9999999864
No 19
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=1.8e-74 Score=594.41 Aligned_cols=383 Identities=28% Similarity=0.404 Sum_probs=324.3
Q ss_pred HHHHHHHhhhcCCccc---ccc-CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 013235 61 DEILAKRKTFLSPSLF---HLY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~---~~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 136 (447)
.++++..++++++... .+. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~ 87 (456)
T PRK07480 8 AELQALDAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT 87 (456)
T ss_pred HHHHhhhhcccccCcccccccccCCCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 4555555555443322 111 347899999999999999999999999999999999999999999999999876443
Q ss_pred --cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCC
Q 013235 137 --LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQS 208 (447)
Q Consensus 137 --~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~ 208 (447)
.+.++...+|+++|++.+|.++++|+|+||||||||.|||+||.+ ++|.+||+++++|||++.+++++++..
T Consensus 88 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~ 167 (456)
T PRK07480 88 FFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMK 167 (456)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCCh
Confidence 367899999999999999877889999999999999999999998 568899999999999999999998765
Q ss_pred Ccccccc--CCCeEeecCCCCcCCCCCCChHH----HHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHH
Q 013235 209 NWKFNVV--QTGVHHALNPDPYRGVFGADGEM----YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (447)
Q Consensus 209 ~~~~~~~--~~g~~~~~~p~~~~~~~~~d~~~----~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~ 282 (447)
.++...+ .+++.+++.|+.++.++..+.+. +.+.+++.+....++++||||+||+||++|++++|++||++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~ 247 (456)
T PRK07480 168 YMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQR 247 (456)
T ss_pred hhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 4443322 35677888888887665433332 24667665554456799999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhc--CC--cccccCCCC
Q 013235 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLT--RR--NYFNTFGGN 357 (447)
Q Consensus 283 l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~--~~--~~~~T~~~n 357 (447)
+|++||++||+||||||||||| ++|+++++|++|||+||||+|+||+ |+|++++++++++.+. .. .|.+||+||
T Consensus 248 lc~~~g~llI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 248 ICRKYDILLVADEVICGFGRTG-EWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHHHcCCEEEEechhhCCCcCc-chhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 9999999999999999999999 7999999999999999999999995 9999999999999883 22 478999999
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC--H-HHHHHHH
Q 013235 358 PVCTAAGHAVLKVIQKDKLQNNA-HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA--K-AETLYIM 433 (447)
Q Consensus 358 p~a~aaala~L~~i~~~~l~~~~-~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~--~-~~~~~~~ 433 (447)
|++|++|+++|++++++++.+++ +++|++|+++|+++ ++++.+.+|||.|+|++|+|+++..++.|. . .....+.
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~ 405 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICR 405 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHH
Confidence 99999999999999999999999 69999999999996 578999999999999999998765444332 1 1235678
Q ss_pred HHHHhCCceeec
Q 013235 434 DKMKGICALFFS 445 (447)
Q Consensus 434 ~~l~~~Gvlv~~ 445 (447)
+.|+++||++..
T Consensus 406 ~~~~~~Gll~~~ 417 (456)
T PRK07480 406 DHCFANGLIMRA 417 (456)
T ss_pred HHHHHCCcEEee
Confidence 899999999864
No 20
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=2.9e-76 Score=543.28 Aligned_cols=380 Identities=43% Similarity=0.746 Sum_probs=345.3
Q ss_pred CHHHHHHHHhhhcCCcccccc-CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 013235 59 SADEILAKRKTFLSPSLFHLY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~ 137 (447)
+..+.+..+++++.+....|| ..|+.|+|++|+|++|.+|++|||+.+++..+ |||||+|++|...|+..+ .++.+
T Consensus 6 SK~etlklRk~hIG~~Cq~Fy~sDP~kivRaq~QYmfDE~g~~yLDCInNVaHv--ghchp~VV~A~~kQmat~-~tN~R 82 (452)
T KOG1403|consen 6 SKTETLKLRKQHIGQACQLFYRSDPLKIVRAQGQYMFDEEGTRYLDCINNVAHV--GHCHPEVVRAGAKQMATI-STNNR 82 (452)
T ss_pred hhHHHHhHHHhccCcceeEEecCCchhhehhccceeeccCcccHHHHhhhhhhc--ccCCHHHHHHHHHHHhHh-cccch
Confidence 456889999999998876665 46999999999999999999999999988854 999999999999999987 34568
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC-
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ- 216 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~- 216 (447)
|.+..+.+.++.|...+|. ++.++|+|||||||++|+|+||.+|+..++|+++.+|||.....+-+ +.|+|+.+.
T Consensus 83 Flhd~lv~cA~~l~stlPe-Lsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~---SPYKF~~g~~ 158 (452)
T KOG1403|consen 83 FLHDELVQCARTLTSTLPE-LSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEV---SPYKFNQGGG 158 (452)
T ss_pred hhHHHHHHHHHHHhhcCCC-ceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeec---cceeccCCCC
Confidence 8999999999999999997 99999999999999999999999999999999999999998877766 467777643
Q ss_pred ---C-CeEeecCCCCcCCCCCCC-------hHHHHHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 217 ---T-GVHHALNPDPYRGVFGAD-------GEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 217 ---~-g~~~~~~p~~~~~~~~~d-------~~~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
+ -++..|+|+.||+.|..+ ...|.++++++++.. ....+|++|.|..|+.||-+.||.+|++.+.+.
T Consensus 159 v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~ 238 (452)
T KOG1403|consen 159 VAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADA 238 (452)
T ss_pred cCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHH
Confidence 3 356789999999988642 235788888888642 234799999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcC--CcccccCCCChHHH
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVCT 361 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~--~~~~~T~~~np~a~ 361 (447)
.+.+|.++|+||||+||||.|+++|+++.+++.||||||||.||||.|+++|+++++|++.+.. ..+++||+|||++|
T Consensus 239 Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsC 318 (452)
T KOG1403|consen 239 VRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSC 318 (452)
T ss_pred HhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhH
Confidence 9999999999999999999999999999999999999999999999999999999999999976 35889999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-C
Q 013235 362 AAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-C 440 (447)
Q Consensus 362 aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-G 440 (447)
|+++++++++++|+++++..++|++|...|+++..+|++|++|||.||||||++++|+.+++|+..++..++..|++. |
T Consensus 319 Av~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~ 398 (452)
T KOG1403|consen 319 AVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYR 398 (452)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999875 7
Q ss_pred ceeec
Q 013235 441 ALFFS 445 (447)
Q Consensus 441 vlv~~ 445 (447)
||+..
T Consensus 399 VLlsa 403 (452)
T KOG1403|consen 399 VLLSA 403 (452)
T ss_pred EEEec
Confidence 88763
No 21
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-74 Score=590.97 Aligned_cols=384 Identities=33% Similarity=0.508 Sum_probs=326.7
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 013235 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (447)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~ 134 (447)
++.+++.+++++..+++.+.... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|.
T Consensus 14 ~~~~~s~~~~~~~~~~~~~~~~~--~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~ 91 (443)
T PRK06058 14 IPGPKSQALAERRAAAVAAGVGS--TLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHT 91 (443)
T ss_pred CCCccHHHHHHHHHHhhcccccc--CCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCc
Confidence 34466777887777776554322 3489999999999999999999999999999999999999999999999988654
Q ss_pred cc-cccchHHHHHHHHHHHhCCCC-CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccc
Q 013235 135 TV-LYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWK 211 (447)
Q Consensus 135 ~~-~~~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~ 211 (447)
.. .+.++...+|+++|++.+|.. .++++|+||||||||.|+|+||.+++|++||+++++|||++.+++++++.. .++
T Consensus 92 ~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~ 171 (443)
T PRK06058 92 CFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYK 171 (443)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccc
Confidence 43 246788899999999999854 368999999999999999999999999999999999999999999998643 233
Q ss_pred cccc--CCCeEeecCCCCcCCCCC--CChHHH----HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 212 FNVV--QTGVHHALNPDPYRGVFG--ADGEMY----AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~--~d~~~~----~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
..+. ..++..++.|++++.+.. .+.+.+ .+.+++.+ .++++|+||+||+||++|+++||++||++|+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~l 248 (443)
T PRK06058 172 SGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEW 248 (443)
T ss_pred cccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhh---CCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 3221 245666776766654321 111222 22333333 246899999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHH
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aa 363 (447)
|++||+++|+|||||||||+| ++|+++++|++|||+|+||+++||+|+|++++++++++.+....|.+||+|||++|++
T Consensus 249 c~~~gillI~DEV~tGfgRtG-~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aa 327 (443)
T PRK06058 249 CRENGVVFIADEVQTGFARTG-AWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAA 327 (443)
T ss_pred HHHcCCEEEEeccccCCCcCh-hhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999 7999999999999999999999999999999999999988777788999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 364 ala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
|+++|++++++++.+++++++++|+++|+++.++++.+.+|||.|+|+++++++++ ++.++...+.++.+.|+++||++
T Consensus 328 a~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~~ 406 (443)
T PRK06058 328 ALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPG-TTEPDAELTKALAAAAHAAGVIV 406 (443)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCC-CCCCcHHHHHHHHHHHHHCCeEE
Confidence 99999999999999999999999999999999899999999999999999998764 23455556788999999999998
Q ss_pred ec
Q 013235 444 FS 445 (447)
Q Consensus 444 ~~ 445 (447)
.+
T Consensus 407 ~~ 408 (443)
T PRK06058 407 LT 408 (443)
T ss_pred ec
Confidence 63
No 22
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-74 Score=594.04 Aligned_cols=382 Identities=31% Similarity=0.487 Sum_probs=326.7
Q ss_pred HHHHHHhhhcCCccccc----cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 013235 62 EILAKRKTFLSPSLFHL----YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (447)
Q Consensus 62 ~~~~~~~~~~~~~~~~~----~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~ 137 (447)
++++..+++++...... ...|+++++|+|+||||.|||+||||++|++++++||+||+|.+|+.+|++++.|.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~ 89 (466)
T PRK07036 10 ALAQADKRHLLHPWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF 89 (466)
T ss_pred HHHHHhhcccccCccCccccccCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc
Confidence 34455566655443211 12489999999999999999999999999999999999999999999999998765442
Q ss_pred --ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 138 --YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 138 --~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
+.++...+|+++|++..|.++++|+|+||||||||.|||+||.+ ++|++||+|+++|||++.+++++++...
T Consensus 90 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~ 169 (466)
T PRK07036 90 GDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAA 169 (466)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCc
Confidence 57889999999999999887889999999999999999999998 4588999999999999999999988665
Q ss_pred cccccc--CCCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 210 WKFNVV--QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 210 ~~~~~~--~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
++..+. ..++.+++.|+.++.+++.+.+ .+.+.+++.+....++++||||+||+||++|+++||++||++|+++
T Consensus 170 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~l 249 (466)
T PRK07036 170 DRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREI 249 (466)
T ss_pred ccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHH
Confidence 443332 2467788888888776654322 2355677777655567999999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCccccc-ccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcC-------CcccccC
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFE-AHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYFNTF 354 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~-~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~-------~~~~~T~ 354 (447)
|++||+++|+|||||||||+| ++|+++ ++|+.|||+|+||+++|| +|+|++++++++++.+.. ..|.+||
T Consensus 250 c~~~g~llI~DEV~tGfGRtG-~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 250 CRRYDILYISDEVVTGFGRLG-HFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HHHcCCEEEEeechhCCCcCc-hhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999999999999999 799998 789999999999999999 499999999999998753 1466899
Q ss_pred CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCC---CHHHHHH
Q 013235 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP---AKAETLY 431 (447)
Q Consensus 355 ~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p---~~~~~~~ 431 (447)
+|||++|++++++|+++++++++++++++|++|+++|+++ ++++.+.+|||.|+|++|+|++++.++.| +......
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~ 407 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQR 407 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHH
Confidence 9999999999999999999999999999999999999987 57899999999999999999876544433 2235677
Q ss_pred HHHHHHhCCceeec
Q 013235 432 IMDKMKGICALFFS 445 (447)
Q Consensus 432 ~~~~l~~~Gvlv~~ 445 (447)
+.+.|+++||++.+
T Consensus 408 ~~~~~~~~Gvl~~~ 421 (466)
T PRK07036 408 IDRHCQERGLLVRP 421 (466)
T ss_pred HHHHHHHCCcEEee
Confidence 89999999999863
No 23
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-74 Score=590.31 Aligned_cols=384 Identities=26% Similarity=0.435 Sum_probs=327.7
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 013235 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (447)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~ 134 (447)
++++.+++++++..++....... ...|+++++|+|+||||.|||+||||++ .+++++||+||+|++|+.+|++++.+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~a~G~~l~D~dG~~ylD~~g-~~~~~lGh~~p~v~~Ai~~ql~~~~~~ 106 (459)
T PRK06082 29 MNDERTQALLKRDSEVFLHQAMS-TPCLDVLASAEGIYIEDVDGKKYMDFHG-NNVHQLGYGHPHVIEKVKEQMAKLPFS 106 (459)
T ss_pred CCCcchHHHHHHHHHHhcccccC-CCCCceEEeeeeeEEEECCCCEEEEccc-HhhcccCCCCHHHHHHHHHHHHhCCCc
Confidence 44455666666444443222111 1337899999999999999999999974 488999999999999999999998776
Q ss_pred cccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 135 ~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
...+.++...+|+++|++.+|..+++++|+||||||||+|+|+||.+++|.+||+|+++|||++.+++++++...++..+
T Consensus 107 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~ 186 (459)
T PRK06082 107 PRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGM 186 (459)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCC
Confidence 55678999999999999999876789999999999999999999999999999999999999999999998866555333
Q ss_pred c--CCCeEeecCCCCcCCCCCCC---hHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC
Q 013235 215 V--QTGVHHALNPDPYRGVFGAD---GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (447)
Q Consensus 215 ~--~~g~~~~~~p~~~~~~~~~d---~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ 289 (447)
. .+++..++.|+.++.+|... .+.+++.+++++++ .+++|+||+||+||+| .+++|++||++|+++|++||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~g~ 263 (459)
T PRK06082 187 GPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK--EGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKHNV 263 (459)
T ss_pred CCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc--CCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHcCC
Confidence 2 26788888888888777532 12346678888864 3489999999999985 677899999999999999999
Q ss_pred EEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC-cccccCCCChHHHHHHHHH
Q 013235 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-NYFNTFGGNPVCTAAGHAV 367 (447)
Q Consensus 290 llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~-~~~~T~~~np~a~aaala~ 367 (447)
++|+||||||||||| ++|+++++|++|||+||||+|+|| +|+|++++++++++.+... .| +||++||++|++++++
T Consensus 264 llI~DEV~tG~GRtG-~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~-~T~~gnpl~~aaa~a~ 341 (459)
T PRK06082 264 LLIIDEIPNGMGRTG-EWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGH-YTHEKSPLGCAAALAT 341 (459)
T ss_pred EEEEechhhCCCccc-hhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCC-CCCCcCHHHHHHHHHH
Confidence 999999999999999 799999999999999999999999 5999999999998765422 34 8999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 368 L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
|++++++++.++++++|++|+++|+++.++++.+++|||.|+|+++||+++..++.+....+..++..|+++||++.+
T Consensus 342 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 419 (459)
T PRK06082 342 IEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKV 419 (459)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEe
Confidence 999999999999999999999999999999999999999999999999876555555555667889999999999864
No 24
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-74 Score=639.69 Aligned_cols=383 Identities=45% Similarity=0.723 Sum_probs=338.3
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 013235 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~ 138 (447)
+..++++++++++.+....+|..|+++++|+|+||||.|||+||||++|+ .++||+||+|++|+.+|++++.. ...|
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~-~~~~ 660 (1013)
T PRK06148 584 DKAEILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNT-NTRY 660 (1013)
T ss_pred CHHHHHHHHHHhcCcccccccCCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCC-cCCc
Confidence 34567888888888887767788999999999999999999999999985 68999999999999999998733 3367
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc---
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--- 215 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--- 215 (447)
.++...+|+++|++.+|.++++|+|+||||||||+|||+||.+|||++||+++++|||++.+++++++.. ++....
T Consensus 661 ~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~ 739 (1013)
T PRK06148 661 LHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGR 739 (1013)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchh-hcccCCCCC
Confidence 8999999999999999977889999999999999999999999999999999999999999999987632 222211
Q ss_pred CCCeEeecCCCCcCCCCCCCh----HHHHHHHHHHHHc--cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC
Q 013235 216 QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~--~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ 289 (447)
..++..++.|+.++.+|+.+. ..+.+++++.++. ..++++||||+||+||++|.+++|++||++|+++|++||+
T Consensus 740 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~ 819 (1013)
T PRK06148 740 PDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGG 819 (1013)
T ss_pred CCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 245677788888888886322 2355667766652 2246899999999999999999999999999999999999
Q ss_pred EEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCC-cccccCCCChHHHHHHHHHH
Q 013235 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR-NYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 290 llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~-~~~~T~~~np~a~aaala~L 368 (447)
++|+|||||||||+|.++|+++++|++|||+||||+||||+|+|++++++++++.+... .|++||+|||++|++++++|
T Consensus 820 llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L 899 (1013)
T PRK06148 820 VCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVL 899 (1013)
T ss_pred EEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHH
Confidence 99999999999999954899999999999999999999999999999999999988764 37899999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++|++++++++++++|++|+++|+++.++++++++|||.|+|+++||+.++.++.|+...+..+++.|+++||++.+
T Consensus 900 ~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~ 976 (1013)
T PRK06148 900 DIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGT 976 (1013)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEec
Confidence 99999999999999999999999999999999999999999999999877666667666778899999999999963
No 25
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=7.7e-74 Score=590.71 Aligned_cols=382 Identities=27% Similarity=0.426 Sum_probs=325.3
Q ss_pred HHHHHHhhhcCCcccc---cc-CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-
Q 013235 62 EILAKRKTFLSPSLFH---LY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV- 136 (447)
Q Consensus 62 ~~~~~~~~~~~~~~~~---~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~- 136 (447)
+++++..+++++.... +. ..|+++++|+|+|+||.|||+||||++|++++++||+||+|++|+++|++++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~ 86 (460)
T PRK06105 7 SLEARDIAYHLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTF 86 (460)
T ss_pred HHHHhhhhhcccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecc
Confidence 4666666665443321 11 358999999999999999999999999999999999999999999999999865432
Q ss_pred -cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 137 -LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 137 -~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
.+.++...+|+++|++.+|.++++|+|+||||||||+|||+||.+ ++|.+||+++++|||++.+++++++...
T Consensus 87 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~ 166 (460)
T PRK06105 87 SHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPN 166 (460)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcc
Confidence 467889999999999999877889999999999999999999877 4688999999999999999999987654
Q ss_pred ccccc--cCCCeEeecCCCCcCCCCC-CC----hHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHH
Q 013235 210 WKFNV--VQTGVHHALNPDPYRGVFG-AD----GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (447)
Q Consensus 210 ~~~~~--~~~g~~~~~~p~~~~~~~~-~d----~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~ 282 (447)
++..+ ...++.+++.|+.++.... .. ...+.+++++++....++++|+||+||+||++|++++|++||++|++
T Consensus 167 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~ 246 (460)
T PRK06105 167 NHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQA 246 (460)
T ss_pred cccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 44332 2357788888876654211 11 12245778888865445789999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC-------cccccC
Q 013235 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNTF 354 (447)
Q Consensus 283 l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~-------~~~~T~ 354 (447)
+|++||+++|+|||||||||+| ++|+++++|++|||+|+||+|+|| +|+|++++++++++.+... .|.+||
T Consensus 247 lc~~~~~llI~DEv~tG~GRtG-~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~ 325 (460)
T PRK06105 247 VLRKYDILLVADEVICGFGRTG-NMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTA 325 (460)
T ss_pred HHHHcCCeEEEeccccCCCcCc-hhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCC
Confidence 9999999999999999999999 799999999999999999999999 6999999999999987531 267999
Q ss_pred CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC---HHHHHH
Q 013235 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLY 431 (447)
Q Consensus 355 ~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~---~~~~~~ 431 (447)
+|||++|++++++|+++++++++++++++|++|+++|+++ ++++.+.+|||.|+|++|||++++.++.|. ...+.+
T Consensus 326 ~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~ 404 (460)
T PRK06105 326 SGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGAR 404 (460)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHH
Confidence 9999999999999999999999999999999999999999 789999999999999999998665444442 234567
Q ss_pred HHHHHHhCCceeec
Q 013235 432 IMDKMKGICALFFS 445 (447)
Q Consensus 432 ~~~~l~~~Gvlv~~ 445 (447)
+.+.|+++||++.+
T Consensus 405 i~~~~~~~Gvl~~~ 418 (460)
T PRK06105 405 ANAAAHEHGVISRA 418 (460)
T ss_pred HHHHHHHCCeEEEe
Confidence 89999999999864
No 26
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-73 Score=584.61 Aligned_cols=385 Identities=31% Similarity=0.517 Sum_probs=334.1
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-c
Q 013235 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-L 137 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~ 137 (447)
+++++++..++++.+.... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.+.+. .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~ 81 (445)
T PRK08593 3 KAHQLIQEDEHYFAKSGRI-KYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAY 81 (445)
T ss_pred hHHHHHHHHHHhhcccccc-CCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccc
Confidence 3456777777776554321 2248999999999999999999999999999999999999999999999999877654 3
Q ss_pred ccchHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCC-ccccc-
Q 013235 138 YLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN-WKFNV- 214 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~-~~~~~- 214 (447)
+.++...+|+++|++.+|... ++|+|+||||||||+|||+||.+|+|++||+++++|||++.+++++++... ++..+
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 578999999999999998653 689999999999999999999999999999999999999999999987432 22222
Q ss_pred -cCCCeEeecCCCCcCCCCCCCh----HHHHHHHHHHHHcc-CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC
Q 013235 215 -VQTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (447)
Q Consensus 215 -~~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~-~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g 288 (447)
..+++.++++|+.+++++.... +.++++++++++.. .++++|+||+||+||++|++++|++||++|+++|++||
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 2367888999988877654332 23456677666542 24689999999999999999999999999999999999
Q ss_pred CEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHH
Q 013235 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L 368 (447)
++||+|||||||||+| ++|+++++|+.|||+||||+++||+|+|++++++++++.+....+.+||++||++|++++++|
T Consensus 242 ~llI~DEv~tg~GrtG-~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l 320 (445)
T PRK08593 242 ILFAVDDIQQGLGRTG-KWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATI 320 (445)
T ss_pred CEEEEechhhCCCcCc-hHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999 788999999999999999999999999999999999998876667889999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++++++++.+++++++++|+++|+++.++++.+++|||.|+|+++++..+..++.++...+..+++.|+++||++..
T Consensus 321 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~ 397 (445)
T PRK08593 321 DMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIA 397 (445)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEec
Confidence 99999999999999999999999999999999999999999999999876545556656678899999999999853
No 27
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=3.5e-73 Score=585.79 Aligned_cols=384 Identities=26% Similarity=0.370 Sum_probs=323.4
Q ss_pred HHHHHHHhhhcCCcccc--cc--CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 013235 61 DEILAKRKTFLSPSLFH--LY--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~--~~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 136 (447)
+++.+...++.+..... .+ ..|+++++|+|+||||.|||+||||.+|+++.+|||+||+|++|+++|++++.+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~ 91 (460)
T PRK12403 12 RDYQAADAAHHIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM 91 (460)
T ss_pred HHHHHhhhcccccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec
Confidence 45566555554433221 11 248999999999999999999999999999999999999999999999999876544
Q ss_pred c--ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc---C---CCeEEEEcCCcccCchhhhhccCCC
Q 013235 137 L--YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---G---CNDIISLRNAYHGNAAGTMGATAQS 208 (447)
Q Consensus 137 ~--~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t---~---~~~ii~~~~~yHG~~~~~~~~t~~~ 208 (447)
. +.++...+|+++|++.+|.++++++|+||||||||+|||+||.|+ + +..|+++.++|||++.+++++++..
T Consensus 92 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~ 171 (460)
T PRK12403 92 FFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMK 171 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCc
Confidence 2 457889999999999998777899999999999999999999883 4 4568899999999999999998865
Q ss_pred Ccccccc-CCCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 209 NWKFNVV-QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 209 ~~~~~~~-~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
.++...+ .+++.+++.|+.|+.+++.... .+.+++++.+....++++|+||+|||||++|++.+|++||++|+++
T Consensus 172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~l 251 (460)
T PRK12403 172 FMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRI 251 (460)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 4442221 2567888888887765533222 2345676666544457899999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcC--C--cccccCCCCh
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR--R--NYFNTFGGNP 358 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~--~--~~~~T~~~np 358 (447)
|++||++||+||||||||||| ++|+++++|++|||+||||+|+||+ |+|++++++++++.+.. . .|.+||++||
T Consensus 252 c~~~g~lLI~DEV~tGfGRtG-~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnP 330 (460)
T PRK12403 252 CRQYDVLLCADEVIGGFGRTG-EWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHP 330 (460)
T ss_pred HHHcCCEEEEeccccCCCcCc-hhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCH
Confidence 999999999999999999999 7999999999999999999999995 99999999999998853 1 3678999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCH---HHHHHHHH
Q 013235 359 VCTAAGHAVLKVIQKDKLQNNAH-VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK---AETLYIMD 434 (447)
Q Consensus 359 ~a~aaala~L~~i~~~~l~~~~~-~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~---~~~~~~~~ 434 (447)
++|++++++|++|+++++.++++ +++++|+++|+++.++++++++|||.|+|++++|++++.++.+.. ....++.+
T Consensus 331 l~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~ 410 (460)
T PRK12403 331 VAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRT 410 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHH
Confidence 99999999999999999999996 999999999999999999999999999999999987655444422 23455778
Q ss_pred HHHhCCceeec
Q 013235 435 KMKGICALFFS 445 (447)
Q Consensus 435 ~l~~~Gvlv~~ 445 (447)
.|+++||++..
T Consensus 411 ~~~~~Gll~~~ 421 (460)
T PRK12403 411 IGFEEGVIIRS 421 (460)
T ss_pred HHHhCCEEEEe
Confidence 88999999864
No 28
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1e-73 Score=588.25 Aligned_cols=363 Identities=32% Similarity=0.507 Sum_probs=315.0
Q ss_pred HHHHHHHhhhcCCccccc-------cCCCeEEEeecc-cEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc
Q 013235 61 DEILAKRKTFLSPSLFHL-------YSKPLNVVDGKM-QYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-------~~~p~~~~~g~G-~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~ 132 (447)
.+.++.++.++.|.+..+ ...|+++++|+| +||||.|||+||||.+|++++++||+||+|++|+.+|++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~ 115 (459)
T PRK11522 36 REVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP 115 (459)
T ss_pred HHHHHHHHhhcCHHHHHhhhcccccCCCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCc
Confidence 455677777776553111 134779999999 999999999999999999999999999999999999999987
Q ss_pred cccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcC---CCeEEEEcCCcccCchhhhhccCCCC
Q 013235 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG---CNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 133 ~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~---~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
+.+..+.++...+|+++|++.+|.+.++++|+||||||||.|+|+||.+|+ |.+||+++++|||++.+++++++...
T Consensus 116 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~ 195 (459)
T PRK11522 116 LHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKST 195 (459)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcc
Confidence 766566789999999999999998788999999999999999999999995 77899999999999999999988665
Q ss_pred ccccccC--CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHH
Q 013235 210 WKFNVVQ--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIK 285 (447)
Q Consensus 210 ~~~~~~~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~ 285 (447)
++.++.+ +++.+++++ | .+++++.++.. .++++|+||+||+||++|+++||++||++|+++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~---------d----~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~ 262 (459)
T PRK11522 196 FRKPFMPLLPGFRHVPFG---------N----IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCD 262 (459)
T ss_pred cccCCCCCCCCCcccCCC---------C----HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHH
Confidence 5543222 344444432 3 35566665431 24589999999999999999999999999999999
Q ss_pred HhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcC--CcccccCCCChHHHH
Q 013235 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVCTA 362 (447)
Q Consensus 286 ~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~--~~~~~T~~~np~a~a 362 (447)
+||+++|+|||||||||+| ++|+++++|+.|||+||||+|||| +|+|++++++++++.+.. ..|++||+|||++|+
T Consensus 263 ~~g~llI~DEV~tG~GRtG-~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~A 341 (459)
T PRK11522 263 EFGALLILDEVQTGMGRTG-KMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACA 341 (459)
T ss_pred HcCCEEEeccceecCCccc-hhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHH
Confidence 9999999999999999999 799999999999999999999999 699999999999987743 357899999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCc
Q 013235 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICA 441 (447)
Q Consensus 363 aala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gv 441 (447)
+++++|++++++++.++++++|++|+++|+++.++++ .+.+|||.|+|++|+|.++ ..+..+.+.|+++||
T Consensus 342 aala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~--------~~~~~i~~~l~~~Gv 413 (459)
T PRK11522 342 AALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN--------EIGYNFASEMFRQRV 413 (459)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--------hHHHHHHHHHHHCCe
Confidence 9999999999999999999999999999999999998 7899999999999999753 235678999999999
Q ss_pred eeec
Q 013235 442 LFFS 445 (447)
Q Consensus 442 lv~~ 445 (447)
++..
T Consensus 414 l~~~ 417 (459)
T PRK11522 414 LVAG 417 (459)
T ss_pred EEEe
Confidence 9853
No 29
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=6e-73 Score=587.70 Aligned_cols=382 Identities=26% Similarity=0.428 Sum_probs=321.5
Q ss_pred HHHHHHhhhcCCccccc---cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc--
Q 013235 62 EILAKRKTFLSPSLFHL---YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-- 136 (447)
Q Consensus 62 ~~~~~~~~~~~~~~~~~---~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-- 136 (447)
+...+....+.|..... ...|+++++++|+||||.|||+||||.+|+++.+|||+||+|++|+++|++++.+...
T Consensus 49 ~~~~~~~~~~~p~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~ 128 (504)
T PLN02760 49 ENGFKGHDMLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFW 128 (504)
T ss_pred hhhhccCCcccCcccccccccCCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceeccc
Confidence 33344444544543221 2358999999999999999999999999999999999999999999999999865433
Q ss_pred cccchHHHHHHHHHHHhC-CCCCceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 137 LYLNHAIADFAEALASKM-PGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~-~~~~~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
.+.++...+|+++|.+.+ +.++++|+|+||||||||+|||+||.|+ +|++||+++++|||++.+++++++.+.
T Consensus 129 ~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~ 208 (504)
T PLN02760 129 NRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPA 208 (504)
T ss_pred ccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChh
Confidence 356888999999999985 4556789999999999999999999773 578999999999999999999988665
Q ss_pred cccc--ccCCCeEeecCCCCcCCCCC-CCh----HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHH
Q 013235 210 WKFN--VVQTGVHHALNPDPYRGVFG-ADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (447)
Q Consensus 210 ~~~~--~~~~g~~~~~~p~~~~~~~~-~d~----~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~ 282 (447)
++.. .+..++.+++.|+.++.... .+. ..+.+++++++....++++|+||+||+||++|+++||++||++|++
T Consensus 209 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~ 288 (504)
T PLN02760 209 LHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQA 288 (504)
T ss_pred hccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 4332 23356778888877664321 121 2235678887764445689999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcC-------CcccccC
Q 013235 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR-------RNYFNTF 354 (447)
Q Consensus 283 l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~-------~~~~~T~ 354 (447)
+|++||++||+|||||||||+| ++|+++++|++|||+||||+||||+ |+|++++++++++.+.. ..|.+||
T Consensus 289 lc~~~g~lLI~DEV~TGfGRtG-~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~ 367 (504)
T PLN02760 289 VLKKYDILFIADEVICAFGRLG-TMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTY 367 (504)
T ss_pred HHHHcCCEEEecchhhCCcccc-hhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCC
Confidence 9999999999999999999999 6999999999999999999999995 99999999999998853 2478999
Q ss_pred CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC---HHHHHH
Q 013235 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLY 431 (447)
Q Consensus 355 ~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~---~~~~~~ 431 (447)
+|||++|++|+++|++++++++.+++++++++|+++|+++ .+++++.+|||.|+|++|+|++++..+.|. ...+..
T Consensus 368 ~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~ 446 (504)
T PLN02760 368 SGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAY 446 (504)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHH
Confidence 9999999999999999999999999999999999999998 678999999999999999998765443332 234677
Q ss_pred HHHHHHhCCceeec
Q 013235 432 IMDKMKGICALFFS 445 (447)
Q Consensus 432 ~~~~l~~~Gvlv~~ 445 (447)
+.+.|+++||++..
T Consensus 447 i~~~~~~~Gvl~~~ 460 (504)
T PLN02760 447 FGAECKKRGMLVRV 460 (504)
T ss_pred HHHHHHhCCcEEEe
Confidence 89999999999864
No 30
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-73 Score=580.84 Aligned_cols=362 Identities=31% Similarity=0.495 Sum_probs=316.5
Q ss_pred CeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCCce
Q 013235 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLKV 160 (447)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~~~ 160 (447)
| ++++++|+||||+|||+||||.+|++++++||+||+|.+|+++|++++.+... .+.++...+|+++|++.+|..+++
T Consensus 15 p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 93 (447)
T PRK06917 15 P-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNW 93 (447)
T ss_pred C-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 5 58999999999999999999999999999999999999999999999766533 367888999999999999987789
Q ss_pred EEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCCCC
Q 013235 161 VFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGVF 232 (447)
Q Consensus 161 v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~~~ 232 (447)
++|+||||||||+|||+||.+ |+|.+||+|+++|||++.+++++++...++..+. ..++..++.|..++.++
T Consensus 94 v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 173 (447)
T PRK06917 94 SFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPV 173 (447)
T ss_pred EEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccccccc
Confidence 999999999999999999876 6789999999999999999999887654443322 24566777777777666
Q ss_pred CCChH----HHHHHHHHHHHccCCCCeEEEEEccccCC-CceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCc
Q 013235 233 GADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGV-GGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF 307 (447)
Q Consensus 233 ~~d~~----~~~~~le~~i~~~~~~~~aavi~Epi~~~-gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~ 307 (447)
+.+.+ .+.+.++++++...++++||||+||+|++ ||+++||++||++|+++|++||+++|+|||||||||+| ++
T Consensus 174 ~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG-~~ 252 (447)
T PRK06917 174 QKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG-AM 252 (447)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc-ch
Confidence 54322 24567788887655568999999999995 78999999999999999999999999999999999999 79
Q ss_pred ccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcCC----cccccCCCChHHHHHHHHHHHHHhhhhHHHHHHH
Q 013235 308 WGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR----NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHV 382 (447)
Q Consensus 308 ~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~~----~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~ 382 (447)
|+++++|+.|||+||||+|+||+ |+|++++++++++.+... .|.+||++||++|++++++|++++++++++++++
T Consensus 253 ~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~ 332 (447)
T PRK06917 253 FAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAE 332 (447)
T ss_pred hhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 99999999999999999999996 999999999999988642 2568999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC---HHHHHHHHHHHHhCCceeec
Q 013235 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 383 ~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~---~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+|++|+++|+++.++++.+.+|||.|+|++|+|++++..+.|. ......+++.|+++||++.+
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 398 (447)
T PRK06917 333 KGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYP 398 (447)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEe
Confidence 9999999999999999999999999999999998765544442 23567899999999999863
No 31
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=9.5e-73 Score=581.02 Aligned_cols=363 Identities=29% Similarity=0.451 Sum_probs=313.0
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCC--
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGN-- 157 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~-- 157 (447)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.++...+|+++|++.+|..
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 100 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKM 100 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCC
Confidence 58999999999999999999999999999999999999999999999998765443 356889999999999999853
Q ss_pred -CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCCCCCC
Q 013235 158 -LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGVFGA 234 (447)
Q Consensus 158 -~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~~~~~ 234 (447)
.+.+||+||||||||.|||+||.||+|.+||+++++|||++.+++++++...++.... ..++..+++|+.++.+|+.
T Consensus 101 ~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (442)
T TIGR00709 101 DYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGI 180 (442)
T ss_pred CccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccC
Confidence 3556777999999999999999999999999999999999999999987554433221 2567788888888887754
Q ss_pred ChH----HHHHHHHHHHHc--cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcc
Q 013235 235 DGE----MYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308 (447)
Q Consensus 235 d~~----~~~~~le~~i~~--~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~ 308 (447)
+.+ .+.+.+++.++. ..++++|+||+||+||++|.+++|++||++|+++|++||+++|+|||||||||+| ++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG-~~~ 259 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG-TMF 259 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC-chh
Confidence 322 223334555532 1246899999999999999999999999999999999999999999999999999 799
Q ss_pred cccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 013235 309 GFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLK 388 (447)
Q Consensus 309 ~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~ 388 (447)
+++++|+.|||+|+||+++||+|+|+++++++ ++.+....|.+||++||++|++|+++|++++++++.++++++|++|+
T Consensus 260 a~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~ 338 (442)
T TIGR00709 260 AFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERIT 338 (442)
T ss_pred HHHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 46555556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCC------CCHHHHHHHHHHHHhCCceeec
Q 013235 389 ERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT------PAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 389 ~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~------p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++|+++.++++.+.+|||.|+|++|+|++++.++. ++...+..+...|+++||++.+
T Consensus 339 ~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 401 (442)
T TIGR00709 339 SFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLET 401 (442)
T ss_pred HHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEee
Confidence 99999999999999999999999999987643321 2233567889999999999853
No 32
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-72 Score=576.97 Aligned_cols=385 Identities=31% Similarity=0.490 Sum_probs=331.0
Q ss_pred CHHHHHHHHhhhcCCccccc--c-C-CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 013235 59 SADEILAKRKTFLSPSLFHL--Y-S-KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~--~-~-~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~ 134 (447)
++.++.++.+++++..+... + . .|+++++|+|+||||.|||+||||++|++++++||+||+|++|+++|++++.|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~ 87 (460)
T PRK06541 8 SDTDLQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF 87 (460)
T ss_pred cHHHHHHHhhcccccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCc
Confidence 45667777677876544332 2 2 478899999999999999999999999999999999999999999999998765
Q ss_pred cc-cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh---c---CCCeEEEEcCCcccCchhhhhccCC
Q 013235 135 TV-LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---T---GCNDIISLRNAYHGNAAGTMGATAQ 207 (447)
Q Consensus 135 ~~-~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~---t---~~~~ii~~~~~yHG~~~~~~~~t~~ 207 (447)
+. .+.++...+|+++|++.+|.++++|+|+||||||||.|||+||.+ + +|.+||+++++|||++.+++++++.
T Consensus 88 ~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~ 167 (460)
T PRK06541 88 PLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGL 167 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCC
Confidence 44 567899999999999999877889999999999999999999998 3 4789999999999999999999886
Q ss_pred CCcccccc--CCCeEeecCCCCcCCC-CCCChHH----HHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHH
Q 013235 208 SNWKFNVV--QTGVHHALNPDPYRGV-FGADGEM----YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAV 280 (447)
Q Consensus 208 ~~~~~~~~--~~g~~~~~~p~~~~~~-~~~d~~~----~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l 280 (447)
+.++..+. ..++.+++.|+.++.+ |+++.+. +++.+++++....++++|+||+||+||++|++++|++||++|
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l 247 (460)
T PRK06541 168 PAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERV 247 (460)
T ss_pred hhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHH
Confidence 65543322 3688889988888776 6555422 356788888754457899999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcCC----cccccCC
Q 013235 281 YKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR----NYFNTFG 355 (447)
Q Consensus 281 ~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~~----~~~~T~~ 355 (447)
+++|++||+++|+|||||||||+| ++|+++++|++|||+||||+++||+ |+|++++++++++.+... .|.+||+
T Consensus 248 ~~lc~~~g~llI~DEV~tGfGR~G-~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~ 326 (460)
T PRK06541 248 REICDRYDVLLVSDEVICAFGRLG-EMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFG 326 (460)
T ss_pred HHHHHHcCCEEEEechhhCCCcCc-hhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCC
Confidence 999999999999999999999999 7899999999999999999999997 999999999999887532 3568999
Q ss_pred CChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCH------HHH
Q 013235 356 GNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK------AET 429 (447)
Q Consensus 356 ~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~------~~~ 429 (447)
+||++|++++++|++++++++.+++++++++|+++|+++.+ ++++.++||.|+|++|+|++++.++.|.. ...
T Consensus 327 gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~ 405 (460)
T PRK06541 327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLR 405 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHH
Confidence 99999999999999999999999999999999999999975 88899999999999999987654444421 112
Q ss_pred HHHHHHHHhCCceeec
Q 013235 430 LYIMDKMKGICALFFS 445 (447)
Q Consensus 430 ~~~~~~l~~~Gvlv~~ 445 (447)
..+.+.|+++||++.+
T Consensus 406 ~~~~~~l~~~Gi~~~~ 421 (460)
T PRK06541 406 GFLSPALFEAGLYCRA 421 (460)
T ss_pred HHHHHHHHhCCeEEEe
Confidence 3678899999999864
No 33
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-71 Score=571.12 Aligned_cols=384 Identities=38% Similarity=0.583 Sum_probs=332.1
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 013235 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (447)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~ 134 (447)
++.+.+++++++.++++.+... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.+.
T Consensus 12 ~~~~~s~~l~~~~~~~~~~~~~--~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~ 89 (441)
T PRK05769 12 LPGPKAREIIERDEKYLAQSTR--RWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHY 89 (441)
T ss_pred CCCccHHHHHHHHHHhhCcccc--cCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCc
Confidence 5567788888877777665422 23589999999999999999999999999999999999999999999999998765
Q ss_pred cc-cccchHHHHHHHHHHHhCCCC-CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccc
Q 013235 135 TV-LYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWK 211 (447)
Q Consensus 135 ~~-~~~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~ 211 (447)
.. .+.++...+|+++|++.+|.+ .++|+|+||||||||+|+|+||.+|+|.+||+++++|||++.+++++++.. .++
T Consensus 90 ~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~ 169 (441)
T PRK05769 90 SLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQR 169 (441)
T ss_pred cCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccc
Confidence 44 466888999999999999853 579999999999999999999999999999999999999999999987642 233
Q ss_pred ccc--cCCCeEeecCCCCcCCCCC-CChH----HHHHHHHH-HHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHH
Q 013235 212 FNV--VQTGVHHALNPDPYRGVFG-ADGE----MYAKDVQD-LIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (447)
Q Consensus 212 ~~~--~~~g~~~~~~p~~~~~~~~-~d~~----~~~~~le~-~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~ 282 (447)
..+ ...++..++.|+.++.+|+ ++.+ .+++.+++ +++. ..++++|+||+||+||++|++++|++||++|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~ 249 (441)
T PRK05769 170 KGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRK 249 (441)
T ss_pred cCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHH
Confidence 222 2367888999988888876 3332 24556777 4432 235689999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHH
Q 013235 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTA 362 (447)
Q Consensus 283 l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~a 362 (447)
+|++||+++|+|||||||||+| .+|+++++|+.||++||||+++||+|+|++++++++++.+ ...|.+||++||++|+
T Consensus 250 l~~~~g~lli~DEv~tG~gr~G-~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~~g~p~~~a 327 (441)
T PRK05769 250 LADKYGILLIDDEVQTGMGRTG-KMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTFGGNPVAAA 327 (441)
T ss_pred HHHHcCCEEEEechhhCCCccc-ceehhhccCCCCCEEEEcccccCCcccEEEEEehhhhhcC-CCCCCCCCCcCHHHHH
Confidence 9999999999999999999999 7889999999999999999999999999999999998654 3458899999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCce
Q 013235 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICAL 442 (447)
Q Consensus 363 aala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvl 442 (447)
+++++|+++++ ++.+++++++++|+++|+++.++++++.+|||.|+|++++|++++ +.++......+.+.|+++||+
T Consensus 328 aa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~Gil 404 (441)
T PRK05769 328 AALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAFKRGLL 404 (441)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC--ccccHHHHHHHHHHHHhCCcE
Confidence 99999999998 999999999999999999999999999999999999999997654 234455667899999999999
Q ss_pred eec
Q 013235 443 FFS 445 (447)
Q Consensus 443 v~~ 445 (447)
+.+
T Consensus 405 ~~~ 407 (441)
T PRK05769 405 LLG 407 (441)
T ss_pred Eec
Confidence 853
No 34
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-71 Score=569.04 Aligned_cols=377 Identities=31% Similarity=0.476 Sum_probs=327.3
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccc
Q 013235 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYL 139 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~ 139 (447)
+++++....++.+.... ..|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|++++.|... .++
T Consensus 4 ~~~~~~~~~~~~~~~~~--~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~ 81 (425)
T PRK07495 4 TSLTDRRNAAISRGVGM--TTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVP 81 (425)
T ss_pred HHHHHHHHhhhccccCc--CCCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccC
Confidence 45555555555443221 238999999999999999999999999999999999999999999999999876543 567
Q ss_pred chHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCC-CCccccccC-
Q 013235 140 NHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNVVQ- 216 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~-~~~~~~~~~- 216 (447)
++...+|+++|++.+|.+. ++|+|+||||||||.|||+||.+|+|.+||+|+++|||++.+++++++. ..++..+.+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAM 161 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCC
Confidence 8899999999999998653 6899999999999999999999999999999999999999999998875 334433332
Q ss_pred -CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 217 -TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 217 -~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
.++.++++|+.+++ .+.+.+++++++++.. ..++++|+||+||+|+++|++++|++|+++|+++|++||+++|+|
T Consensus 162 ~~~~~~~~~~~~~~g---~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 162 MPDVYHVPFPVELHG---VSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCeEEecCCccccc---ccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 57788888876553 2344556777887763 235689999999999999999999999999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhh
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~ 374 (447)
||||||||+| ++|+++++|+.|||+||||+++||+|+|++++++++++.+....+.+||++||++|++++++|++++++
T Consensus 239 Ev~tG~gr~G-~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~ 317 (425)
T PRK07495 239 EVQTGFARTG-KLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEE 317 (425)
T ss_pred chhhcCCcCC-CceeecccCCCCCEEeehhhhcCCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999 688999999999999999999999999999999999998877678899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 375 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++.+++++++++|+++|+++.++++.+.+|||.|+|++++|.+++ .+.|+...+.++++.|+++||++.
T Consensus 318 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~-~~~~~~~~~~~~~~~~~~~Gvl~~ 386 (425)
T PRK07495 318 DLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDAD-SGLPSAEFANRVRLKALEKGLILL 386 (425)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCC-CCCccHHHHHHHHHHHHHCCeEEe
Confidence 999999999999999999999999999999999999999997543 345655567789999999999985
No 35
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-71 Score=618.46 Aligned_cols=386 Identities=41% Similarity=0.677 Sum_probs=337.6
Q ss_pred CCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 013235 57 GPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (447)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 136 (447)
.+++.++++++++++.+....+++.|+.+++|+|+|+||.|||+||||++|+. ++||+||+|++|+++|++++.+. .
T Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~~~~--~lGh~hp~v~~Ai~~q~~~l~~~-~ 619 (972)
T PRK06149 543 PPDAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDMVNNVT--VLGHGHPRLAAAAARQWSLLNTN-S 619 (972)
T ss_pred CCCHHHHHHHHHHhhccchhhcccCCCeEEEeeeeEEEeCCCCEEEECCCCcc--ccCCCCHHHHHHHHHHHHhcccc-c
Confidence 35778999999898877665667788999999999999999999999999864 79999999999999999988653 3
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcc--c-c
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--F-N 213 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~--~-~ 213 (447)
.+.++...+|+++|++.+|.++++|+|+||||||||+|||+||.+++|++||+++++|||++.+++++++..... . .
T Consensus 620 ~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~ 699 (972)
T PRK06149 620 RFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALE 699 (972)
T ss_pred cccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccC
Confidence 467788999999999999977889999999999999999999999999999999999999999998886532111 1 1
Q ss_pred ccCCCeEeecCCCCcCCCCCCC--hHHHHHHHHHHHHc--cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC
Q 013235 214 VVQTGVHHALNPDPYRGVFGAD--GEMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (447)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d--~~~~~~~le~~i~~--~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ 289 (447)
....+++.++.|+.++++|..+ ...|.+++++.++. ..++++|+||+||+||++|.+++|++||++|+++|++||+
T Consensus 700 ~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~ 779 (972)
T PRK06149 700 TRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGG 779 (972)
T ss_pred CCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 1124677888888888888532 34455666655542 2346899999999999999999999999999999999999
Q ss_pred EEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcC-CcccccCCCChHHHHHHHHHH
Q 013235 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR-RNYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 290 llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~-~~~~~T~~~np~a~aaala~L 368 (447)
++|+|||||||||+|+.+|+++++|++|||+||||+||||+|+|++++++++++.+.. ..+++||+|||++|++|+++|
T Consensus 780 llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L 859 (972)
T PRK06149 780 VCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVL 859 (972)
T ss_pred EEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHH
Confidence 9999999999999995578999999999999999999999999999999999998864 346689999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++|++++++++++++|++|+++|+++.++++++++|||.|+|+|+||+.++.++.|+...+.++++.|+++||++.+
T Consensus 860 ~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~ 936 (972)
T PRK06149 860 DVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQP 936 (972)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEee
Confidence 99999999999999999999999999999999999999999999999877666667666778899999999999864
No 36
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-72 Score=521.97 Aligned_cols=362 Identities=29% Similarity=0.489 Sum_probs=317.3
Q ss_pred CCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 013235 58 PSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~ 137 (447)
.+++++++...+|-..+ |.+.|+++++++|+++||.+|++|+||.++++.++.|||||.|++|+++|.+++.-++..
T Consensus 21 ~aS~~~~~~E~k~~ahn---yhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssra 97 (427)
T KOG1402|consen 21 TASQQIMERENKYGAHN---YHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRA 97 (427)
T ss_pred cchhhhhchhhhccccc---CCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHH
Confidence 34566777767765444 667899999999999999999999999999999999999999999999999998777777
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc--------CCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--------GCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t--------~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
+.++...++++.+.++++ .+.|+-.|+|.||+|.|+|+||.+. .+.+|++..++|||+|.++.+++..+.
T Consensus 98 fYnd~~~~f~~~vt~lf~--~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~d 175 (427)
T KOG1402|consen 98 FYNDVLGEFAEYVTKLFG--YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPD 175 (427)
T ss_pred HhhhhHHHHHHHHHHhcC--cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcc
Confidence 889999999999999994 6789999999999999999999652 245788899999999999999988653
Q ss_pred -cc-ccccCCC-eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH
Q 013235 210 -WK-FNVVQTG-VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK 286 (447)
Q Consensus 210 -~~-~~~~~~g-~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~ 286 (447)
|. |....++ +..+++ +| +++|+.+++. +++|+||+|||||++|++.||++||+++++||++
T Consensus 176 s~~~fgp~~P~~~~~v~Y---------~d----~eale~~l~~---~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtk 239 (427)
T KOG1402|consen 176 SWDGFGPFLPGVVDKVPY---------GD----AEALEVALKS---PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTK 239 (427)
T ss_pred hhhccCCCCCCcceeecc---------CC----HHHHHHHhcC---CCeeEEEeeccccccceEeCCchhHHHHHHHHHh
Confidence 32 2222245 455543 23 6788888874 5899999999999999999999999999999999
Q ss_pred hCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCCcccccCCCChHHHHHHH
Q 013235 287 AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGH 365 (447)
Q Consensus 287 ~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaal 365 (447)
|++++|+||||||+|||| ++|++++.++.||||+|||+++|| +|+++++.++++|-.+.++.|++||+|||++|++|.
T Consensus 240 ynvl~I~DEvQTGl~RTG-k~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vai 318 (427)
T KOG1402|consen 240 YNVLLIADEVQTGLARTG-KLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAI 318 (427)
T ss_pred hcEEEEehhhhhcccccC-cEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHH
Confidence 999999999999999999 899999999999999999999999 699999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 366 a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
|+|++|.+++|.++++.+|..|+.+|.++..+++ ++.+|||+|++.+|++...+.+ ...+..++-.|+++|+|..
T Consensus 319 Aalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~----~~~aw~~cl~lk~~g~LAk 394 (427)
T KOG1402|consen 319 AALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTS----GQDAWDVCLALKENGLLAK 394 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccccc----chhHHHHHHcccccccccC
Confidence 9999999999999999999999999999999885 5789999999999999754321 2346778888899999864
Q ss_pred c
Q 013235 445 S 445 (447)
Q Consensus 445 ~ 445 (447)
+
T Consensus 395 p 395 (427)
T KOG1402|consen 395 P 395 (427)
T ss_pred C
Confidence 3
No 37
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=2.5e-70 Score=565.05 Aligned_cols=389 Identities=32% Similarity=0.518 Sum_probs=336.5
Q ss_pred CCCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc
Q 013235 54 PYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH 133 (447)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~ 133 (447)
.++.+++.+++++..+++.+.... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+++|++++.|
T Consensus 11 ~~~~~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~ 88 (451)
T PRK06918 11 QIPGPKAASLLERRQNIVPKGVSN--GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIH 88 (451)
T ss_pred cCCCCCHHHHHHHHHHhhcccccc--CCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccC
Confidence 345678889999888887554322 237899999999999999999999999999999999999999999999999877
Q ss_pred ccc-cccchHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCC-CCc
Q 013235 134 STV-LYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNW 210 (447)
Q Consensus 134 ~~~-~~~~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~-~~~ 210 (447)
... .+.++...+|+++|++.+|... ++|+|+||||||||+|||+||.+|+|.+||+++++|||++.+++++++. ..+
T Consensus 89 ~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~ 168 (451)
T PRK06918 89 TGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPY 168 (451)
T ss_pred ccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccc
Confidence 543 4568899999999999998655 5899999999999999999999999999999999999999999998874 234
Q ss_pred ccccc--CCCeEeecCCCCcCCCCCCChHH----HHHHHHHHHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 211 KFNVV--QTGVHHALNPDPYRGVFGADGEM----YAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 211 ~~~~~--~~g~~~~~~p~~~~~~~~~d~~~----~~~~le~~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
+..+. .+++.++++|+.++.+.+...+. +.+.+++++.. ..++++||||+||+||++|.++++++|+++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l 248 (451)
T PRK06918 169 KFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNI 248 (451)
T ss_pred cccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHH
Confidence 33222 25678888888777655432222 23456665532 2356899999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHH
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aa 363 (447)
|++||+++|+||||+||||+| .+|+++++++.|||++|||++++|+|+|++++++++++.+....+.+||++||++|++
T Consensus 249 ~~~~gillI~DEV~tg~gr~g-~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aa 327 (451)
T PRK06918 249 CSEHGILFVADEIQTGFARTG-KYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAA 327 (451)
T ss_pred HHHcCCEEEEeccccCcCccC-ceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHH
Confidence 999999999999999999999 6888899999999999999999999999999999999988766788999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 364 ala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
++++|++++++++.+++++++++|+++|+++.++++.+.+|||.|+|+++++.+++.++.|+...+.++.+.|+++||++
T Consensus 328 a~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv 407 (451)
T PRK06918 328 ALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLL 407 (451)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEE
Confidence 99999999999999999999999999999998888889999999999999998655455566666788999999999999
Q ss_pred ec
Q 013235 444 FS 445 (447)
Q Consensus 444 ~~ 445 (447)
.+
T Consensus 408 ~~ 409 (451)
T PRK06918 408 LS 409 (451)
T ss_pred ee
Confidence 64
No 38
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.3e-71 Score=565.87 Aligned_cols=360 Identities=27% Similarity=0.409 Sum_probs=313.0
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCC
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNL 158 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~ 158 (447)
+.|+++++++|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.++...+|+++|++.+|.++
T Consensus 27 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~ 106 (442)
T PRK13360 27 KAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGL 106 (442)
T ss_pred CCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999999876554 3568889999999999998778
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCC-CcC
Q 013235 159 KVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPD-PYR 229 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~-~~~ 229 (447)
++|+|+||||||||.|+|+||.++ +|.+||+|+++|||++.+++++++...++..+. ..++.+++.+. .++
T Consensus 107 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~ 186 (442)
T PRK13360 107 NHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLAR 186 (442)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhc
Confidence 899999999999999999999985 578999999999999999999998765544332 24567777764 455
Q ss_pred CCCCCCh----HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC
Q 013235 230 GVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS 305 (447)
Q Consensus 230 ~~~~~d~----~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~ 305 (447)
++|..+. ..+.+++++++....++++|+||+||+||++|++++|++||++|+++|++||+++|+|||||||||+|
T Consensus 187 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG- 265 (442)
T PRK13360 187 NAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG- 265 (442)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-
Confidence 5554322 23467788888755557899999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC-------cccccCCCChHHHHHHHHHHHHHhhhhHH
Q 013235 306 HFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQ 377 (447)
Q Consensus 306 ~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~-------~~~~T~~~np~a~aaala~L~~i~~~~l~ 377 (447)
++|+++++|+.|||+||||+|+|| +|+|++++++++++.+... .|.+||++||++|++++++|++++++++.
T Consensus 266 ~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~ 345 (442)
T PRK13360 266 APFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLL 345 (442)
T ss_pred cchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 799999999999999999999999 7999999999999987542 26689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 378 NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 378 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++++++++|+++|+++. +++.+.+|||.|+|++++++..... + ...+.++++.|+++||++.
T Consensus 346 ~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~~--~-~~~~~~~~~~l~~~Gvl~~ 408 (442)
T PRK13360 346 TRAARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDGK--P-GKRAYEVFLKCFEKGLMIR 408 (442)
T ss_pred HHHHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCCC--c-chhHHHHHHHHHHCCcEEE
Confidence 999999999999999985 4888999999999999999753211 1 2345678889999999985
No 39
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-70 Score=559.74 Aligned_cols=383 Identities=32% Similarity=0.464 Sum_probs=332.6
Q ss_pred HHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc-c
Q 013235 60 ADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL-Y 138 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-~ 138 (447)
+.+++++.++++.+.... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|.+.. +
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~ 81 (443)
T PRK08360 3 PLEIIERYSKVISPANRV-TYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYG 81 (443)
T ss_pred HHHHHHHHHHhccccccc-ccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccccc
Confidence 456777777776655321 13489999999999999999999999999999999999999999999999998776553 4
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc-C
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV-Q 216 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~-~ 216 (447)
.++...+|+++|++.+|.+.++|+|+||||||||+|||+||.+|+|++|+.+.++|||++.+++++++.. .++..+. .
T Consensus 82 ~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 161 (443)
T PRK08360 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGEL 161 (443)
T ss_pred CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCC
Confidence 4788899999999999877789999999999999999999999999999999999999999999988743 2222211 3
Q ss_pred CCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHcc-CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEE
Q 013235 217 TGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~-~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ll 291 (447)
.++.++++|+.++.++..+.. .+++.++++++.. .++++|+||+||+||++|.++++++|+++|+++|++||+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~ll 241 (443)
T PRK08360 162 SDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILL 241 (443)
T ss_pred CCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 577888888887766643211 2355567777542 24689999999999999999999999999999999999999
Q ss_pred EEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 292 I~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
|+||||+||||+| ++|+++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|+.+
T Consensus 242 I~DEv~~g~gr~G-~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l 320 (443)
T PRK08360 242 VVDEVQSGLGRTG-KWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEI 320 (443)
T ss_pred EEeccccCCCcCc-cchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999 688888899999999999999999999999999999998876668899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 372 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++++.+++++++++|+++|+++.++++.+.+|||.|+|++++|++++.++.|+...+.++.+.|+++||++.
T Consensus 321 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 393 (443)
T PRK08360 321 EEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVT 393 (443)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEe
Confidence 9889999999999999999999998999999999999999999987665555655567789999999999985
No 40
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1.1e-71 Score=554.55 Aligned_cols=329 Identities=37% Similarity=0.638 Sum_probs=292.0
Q ss_pred EEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccc-ccccchHHHHHHHHHHHhCCCCCceEE
Q 013235 84 NVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST-VLYLNHAIADFAEALASKMPGNLKVVF 162 (447)
Q Consensus 84 ~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~~~~~~elae~L~~~~~~~~~~v~ 162 (447)
+|++++|+||||.||++||||+++++++++||+||+|.+|+++|++++.+.+ ..+.++...+|+++|.+.+|.+.++|+
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 5789999999999999999999999999999999999999999999988765 467799999999999999988899999
Q ss_pred EcCCHHHHHHHHHHHHH------hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCCCCC
Q 013235 163 FTNSGTEANELAIMMAR------LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGA 234 (447)
Q Consensus 163 ~~~sGseA~e~Aik~ar------~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~ 234 (447)
|++||+||||.|||+|| ..++|.+|++|+++|||++.+++++++.+.++..... .++.++|.|++.+. .
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~ 157 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAAD---E 157 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHH---H
T ss_pred eccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchh---h
Confidence 99999999999999999 7899999999999999999999999877665544332 56788888775430 0
Q ss_pred ChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccC
Q 013235 235 DGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG 314 (447)
Q Consensus 235 d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~g 314 (447)
......+++++.+....++++||||+||+|+++|.++++++||++|+++|++||+++|+|||||||||+| ++|+++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG-~~~a~~~~g 236 (339)
T PF00202_consen 158 EEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTG-KFFASEHYG 236 (339)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTS-SSSGHHHHT
T ss_pred hHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccC-Cccceeccc
Confidence 1122344555555444456999999999999999999999999999999999999999999999999999 799999999
Q ss_pred CCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 013235 315 VVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 315 v~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 394 (447)
++|||+|+||+|+||+|+|++++++++++.+....+.+||++||++|++++++|++++++++.+++++++++|+++|+++
T Consensus 237 v~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 237 VDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLREL 316 (339)
T ss_dssp SSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccchhhhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998777999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeeeEeecceeEEEEEe
Q 013235 395 KDKYGIIGDVRGRGFLLGVEFV 416 (447)
Q Consensus 395 ~~~~~~i~~vrg~Gl~~giel~ 416 (447)
.++|+.+.+|||.|+|++|||+
T Consensus 317 ~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 317 AARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHTTTEEEEEEETTEEEEEES
T ss_pred HHhCCCeEEEeeeCeEEEEEEE
Confidence 9999999999999999999995
No 41
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-70 Score=561.47 Aligned_cols=382 Identities=37% Similarity=0.551 Sum_probs=329.5
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccc-cc
Q 013235 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST-VL 137 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~ 137 (447)
...+++++..+++.+....++ .|+++++++|+||||.|||+||||++|+++++|||+||+|++|+++|++++.+.+ ..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~ 82 (433)
T PRK08117 4 TWSDLVERYPQLLAPALAKDH-PNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGV 82 (433)
T ss_pred CHHHHHHHHHHHhhhhccccC-CCceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccc
Confidence 345677777666655432222 2489999999999999999999999999999999999999999999999987755 34
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCC-CCccccc-c
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNV-V 215 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~-~~~~~~~-~ 215 (447)
+.++...+|+++|++.+|...++|+|+||||||||.|||+||.+++|++||+++++|||++.+++++++. ..++... +
T Consensus 83 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 162 (433)
T PRK08117 83 IYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQP 162 (433)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCC
Confidence 6788999999999999987788999999999999999999999999999999999999999999988764 2233222 2
Q ss_pred -CCCeEeecCCCCcCCCCCCChH----HHHHHHHHHHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC
Q 013235 216 -QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (447)
Q Consensus 216 -~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ 289 (447)
..++.+++.|+.++.+++.+.+ ...+++++++++ ..++++|+||+||+||++|+++++++||++|+++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 242 (433)
T PRK08117 163 LLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGI 242 (433)
T ss_pred CCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 3678888888877766543322 235667777764 2356899999999999999999999999999999999999
Q ss_pred EEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 290 llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
++|+||||+||||+| ++|+++++|+.|||+||||++++|+|+|++++++++++.+....+.+||++||++|++++++|+
T Consensus 243 llI~DEv~tG~gr~G-~~~~~~~~gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~ 321 (433)
T PRK08117 243 LLIFDEVQTGFGRTG-EWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLE 321 (433)
T ss_pred EEEEecchhccCccc-cchhHhhcCCCCCEeehhhhccCCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 999999999999999 6888899999999999999999999999999999999988766788999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++++++++++++++++|+++|+++.++++.+.++||.|+|++++|.+++ ..|+......+.+.|+++||++.
T Consensus 322 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~--~~~~~~~~~~~~~~l~~~Gv~~~ 394 (433)
T PRK08117 322 VIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPD--GEPDGDAVEKILDKCLEKGLLFY 394 (433)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCC--CCcchHHHHHHHHHHHHCCCEEe
Confidence 99888999999999999999999998889999999999999999998654 33444556778999999999874
No 42
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-70 Score=561.53 Aligned_cols=350 Identities=24% Similarity=0.311 Sum_probs=303.0
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCCc
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~~ 159 (447)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|... .+.++...+|+++|++..|.+++
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 101 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLD 101 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcC
Confidence 58999999999999999999999999999999999999999999999999877654 35688899999999999987788
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCC-Ccccccc--CCCeEeecCCCCcCC
Q 013235 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--QTGVHHALNPDPYRG 230 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~--~~g~~~~~~p~~~~~ 230 (447)
+|+|++|||||||.|||+||.++ +|.+||+++++|||.+.+++++++.. .++..+. ..++..++.|.....
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 181 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGS 181 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCC
Confidence 99999999999999999999985 57899999999999999999998742 2222221 135566666532211
Q ss_pred CCCCChHHHHHHHHHHHHccCCCCeEEEEEccc-cCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc
Q 013235 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (447)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi-~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~ 309 (447)
.+ ++.+.+.+.+++++. +++||||+||+ ||.||++++|++||++|+++|++||+++|+|||||||||+| ++|+
T Consensus 182 ~~-~~~~~~~~~~~~~~~----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG-~~~a 255 (422)
T PRK05630 182 SP-QEISEYLRSLELLID----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG-ELFA 255 (422)
T ss_pred Ch-HHHHHHHHHHHHHHh----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc-hhhH
Confidence 11 234456677777764 48999999996 99999999999999999999999999999999999999999 7999
Q ss_pred ccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcCC------cccccCCCChHHHHHHHHHHHHHhhhhHHHHHHH
Q 013235 310 FEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHV 382 (447)
Q Consensus 310 ~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~~------~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~ 382 (447)
++++|+.|||+||||+++||+ |+|++++++++++.+... .|.+||++||++|++++++|++++++++.+++++
T Consensus 256 ~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~ 335 (422)
T PRK05630 256 TLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKR 335 (422)
T ss_pred HHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 999999999999999999995 999999999999987532 4789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 383 ~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++++|+++|+++. +++.+.+|||+|+|++|+|.++. .+..+.+.|+++||++..
T Consensus 336 ~g~~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~~--------~~~~~~~~~~~~Gl~~~~ 389 (422)
T PRK05630 336 IEAELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQPV--------DMEEATQAAVDHGVWLRP 389 (422)
T ss_pred HHHHHHHHHHHhh-cCCCeeeeeccccEEEEEECCcc--------cHHHHHHHHHHCCeEEEe
Confidence 9999999999875 48889999999999999996431 135788999999999863
No 43
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.8e-70 Score=557.14 Aligned_cols=376 Identities=27% Similarity=0.394 Sum_probs=316.9
Q ss_pred CCHHHHHHHHhhhcCCccc---ccc-----CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHH
Q 013235 58 PSADEILAKRKTFLSPSLF---HLY-----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIK 129 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~---~~~-----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~ 129 (447)
+++.+++++.+++++.... +++ ..|+++++++|+||||.|||+||||.+|++++++||+||+|.+|+.+|++
T Consensus 4 ~~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~ 83 (428)
T PRK12389 4 TKSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAE 83 (428)
T ss_pred hhhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHH
Confidence 5778899999988865432 222 35899999999999999999999999999999999999999999999999
Q ss_pred hcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 130 RIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 130 ~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
++.+ ..++++...+|+++|.+.+|. .++|+|+||||||||.|+|+||.+|+|.+||+|+++|||++.+++++++...
T Consensus 84 ~~~~--~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~ 160 (428)
T PRK12389 84 NGVL--YGTPTELEIEFAKMLKEAIPS-LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGP 160 (428)
T ss_pred hCCc--cCCCCHHHHHHHHHHHHhCCC-CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcc
Confidence 8754 235788999999999999884 7899999999999999999999999999999999999999999999887543
Q ss_pred ccccccC-CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC
Q 013235 210 WKFNVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (447)
Q Consensus 210 ~~~~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g 288 (447)
++...+. .++.....|+.++.+++ | .+.++++++.. ++++|+||+||+||++|+++||++||++|+++|++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-d----~~~l~~~l~~~-~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g 234 (428)
T PRK12389 161 STLGTPDSAGVPKSIAQEVITVPFN-D----IEALKEALDKW-GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAG 234 (428)
T ss_pred cccCCCCCCCCCCcccCceEEcCCC-C----HHHHHHHHHhc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 3221111 12221122233333442 3 56777777644 3689999999999999999999999999999999999
Q ss_pred CEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcC---CcccccCCCChHHHHHHH
Q 013235 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---RNYFNTFGGNPVCTAAGH 365 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~---~~~~~T~~~np~a~aaal 365 (447)
+++|+||||||| |+| .+|+++++|++|||+||||+|+||+|+|++++++++++.+.. ..|++||+|||++|++++
T Consensus 235 ~llI~DEV~tG~-Rt~-~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaal 312 (428)
T PRK12389 235 ALVIYDEVITAF-RFM-YGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGI 312 (428)
T ss_pred CEEEEEcccccc-ccC-cchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHH
Confidence 999999999999 998 577788999999999999999999999999999999998853 247799999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE-eecceeEEEEEeeCCCC-----CCCCHHHHHHHHHHHHhC
Q 013235 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV-RGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKGI 439 (447)
Q Consensus 366 a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~Gl~~giel~~~~~~-----~~p~~~~~~~~~~~l~~~ 439 (447)
++|++++++++++++++++++|+++|+++.++++.+.++ |+.| |++++|.+++.. ..++......+.+.|+++
T Consensus 313 a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 391 (428)
T PRK12389 313 ACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ 391 (428)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999988887 7888 889999765321 112334567899999999
Q ss_pred Cceeec
Q 013235 440 CALFFS 445 (447)
Q Consensus 440 Gvlv~~ 445 (447)
||++.+
T Consensus 392 Gv~~~~ 397 (428)
T PRK12389 392 GINLAP 397 (428)
T ss_pred CcEeec
Confidence 999864
No 44
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=5e-70 Score=560.17 Aligned_cols=360 Identities=29% Similarity=0.434 Sum_probs=312.2
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCC
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNL 158 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~ 158 (447)
..|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+++|++++.|.+. .+.++...+|+++|++.+|.++
T Consensus 30 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~ 109 (445)
T PRK09221 30 AAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGL 109 (445)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999999877654 3678899999999999998778
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCC-CcC
Q 013235 159 KVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPD-PYR 229 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~-~~~ 229 (447)
++|+|+||||||||.|+|+||.++ +|.+||+|+++|||++.+++++++...++..+. ..++.+++.|+ .++
T Consensus 110 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (445)
T PRK09221 110 DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPE 189 (445)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccc
Confidence 899999999999999999999985 477999999999999999999988655443322 24667777765 455
Q ss_pred CCCCCCh----HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC
Q 013235 230 GVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS 305 (447)
Q Consensus 230 ~~~~~d~----~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~ 305 (447)
+++.... +.+.++++++++...++++|+||+||+||++|++.+|++||++|+++|++||+++|+|||||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG- 268 (445)
T PRK09221 190 NAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG- 268 (445)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc-
Confidence 4443322 23456788888765557899999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC-------cccccCCCChHHHHHHHHHHHHHhhhhHH
Q 013235 306 HFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQ 377 (447)
Q Consensus 306 ~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~-------~~~~T~~~np~a~aaala~L~~i~~~~l~ 377 (447)
++|+++++|+.|||+|+||+++|| +|+|++++++++++.+... .|.+||++||++|++++++|++++++++.
T Consensus 269 ~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~ 348 (445)
T PRK09221 269 AAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLF 348 (445)
T ss_pred hhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHH
Confidence 799999999999999999999999 7999999999999987531 36689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 378 NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 378 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++++++++|+++|+++. +++.+.+|||.|+|++++|++.... + ...+.++.+.|+++||++.
T Consensus 349 ~~~~~~g~~l~~~l~~l~-~~~~v~~vrg~Gl~~~v~~~~~~~~--~-~~~~~~~~~~~~~~Gv~~~ 411 (445)
T PRK09221 349 ERAAELAPYFEDAVHSLK-GLPHVIDIRNIGLVAGIELAPRPGA--P-GARGYEAFMKCFEKGLLVR 411 (445)
T ss_pred HHHHHHHHHHHHHHHhhc-cCCCEEEEecCceEEEEEEeccccc--c-cchHHHHHHHHHHCCeEEe
Confidence 999999999999999984 6888999999999999999753211 1 1234678899999999985
No 45
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.8e-70 Score=557.40 Aligned_cols=370 Identities=24% Similarity=0.356 Sum_probs=311.9
Q ss_pred HHHHHHhhhcCCccccc-cCCC-eEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cc
Q 013235 62 EILAKRKTFLSPSLFHL-YSKP-LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LY 138 (447)
Q Consensus 62 ~~~~~~~~~~~~~~~~~-~~~p-~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~ 138 (447)
++++...+++++..... ...| +++++|+|+||||.|||+||||++|++++++||+||+|++|+++|++++.|... .+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~ 84 (429)
T PRK06173 5 ELLELDRQHIWHPYSSVTDPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGF 84 (429)
T ss_pred HHhhhhhcccccccccccccCCCceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcccccc
Confidence 44555556655433221 1234 468999999999999999999999999999999999999999999999877554 46
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCC-Ccc
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQS-NWK 211 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~ 211 (447)
.++...+|+++|++.+|.++++|+|+||||||||+|||+||.+ ++|.+||+++++|||.+.+++++++.. .++
T Consensus 85 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 164 (429)
T PRK06173 85 THEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMH 164 (429)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhh
Confidence 7899999999999999877899999999999999999999998 468899999999999999999987642 233
Q ss_pred cccc--CCCeEeecCCCCcCCCCCCC-hHHHHHHHHHHHHccCCCCeEEEEEccc-cCCCceeeCCCChHHHHHHHHHHh
Q 013235 212 FNVV--QTGVHHALNPDPYRGVFGAD-GEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKA 287 (447)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d-~~~~~~~le~~i~~~~~~~~aavi~Epi-~~~gG~~~~~~~~l~~l~~l~~~~ 287 (447)
..+. ..++.+++.|+.+ +..+ .+.+++.++++++.. ++++||||+||+ ||+||++++|++|+++|+++|++|
T Consensus 165 ~~~~~~~~~~~~~~~p~~~---~~~~~~~~~l~~l~~~i~~~-~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~ 240 (429)
T PRK06173 165 GLFNHSLPVQYFLPQPSIK---FGEEWNDEAIEPLQDLLEQK-GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY 240 (429)
T ss_pred hcccccCCCCeEeCCCCcc---cchhHHHHHHHHHHHHHHhC-CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence 2222 2456667666543 1111 123467788888643 468999999997 999999999999999999999999
Q ss_pred CCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcC-----CcccccCCCChHHH
Q 013235 288 GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR-----RNYFNTFGGNPVCT 361 (447)
Q Consensus 288 g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~-----~~~~~T~~~np~a~ 361 (447)
|+++|+|||||||||+| ++|+++++|+.|||+||||+++||+ |+|++++++++++.+.. ..|++||++||++|
T Consensus 241 g~llI~DEv~tG~GrtG-~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~ 319 (429)
T PRK06173 241 GVLLIFDEIATGFGRTG-KLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLAC 319 (429)
T ss_pred CCeEEecchhcCCCcCC-cchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHH
Confidence 99999999999999999 7999999999999999999999994 99999999999998853 24778999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCc
Q 013235 362 AAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICA 441 (447)
Q Consensus 362 aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gv 441 (447)
++++++|++++++++.+++++++++|+++|+++ .+++.+.+|||.|+|++|++.++. .+..+.+.|+++||
T Consensus 320 aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~~--------~~~~i~~~l~e~Gi 390 (429)
T PRK06173 320 AIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMKEPV--------NMATLQPRFVEHGI 390 (429)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeCCcc--------cHHHHHHHHHHCCe
Confidence 999999999999999999999999999999987 568889999999999999995431 24578899999999
Q ss_pred eeec
Q 013235 442 LFFS 445 (447)
Q Consensus 442 lv~~ 445 (447)
++..
T Consensus 391 ~v~~ 394 (429)
T PRK06173 391 WVRP 394 (429)
T ss_pred EEEe
Confidence 9864
No 46
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.2e-69 Score=555.33 Aligned_cols=376 Identities=24% Similarity=0.340 Sum_probs=308.5
Q ss_pred CCCCCCCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHH--
Q 013235 50 YSPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQ-- 127 (447)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~-- 127 (447)
--+.+.+++++.+++++..+++... .+..|+.+++|+|+||||.|||+||||++|++++++||+||+|++|+++|
T Consensus 12 ~~~~~~~~~~s~~l~~~~~~~~~~~---~~~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~ 88 (464)
T TIGR00699 12 LMKTEIPGPKSKAAMKQLNEVFDAR---AVHFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEM 88 (464)
T ss_pred ccccCCCCccHHHHHHHHHhhhccc---CcccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHH
Confidence 3344566788999999888875332 12459999999999999999999999999999999999999999999985
Q ss_pred HHhcccccccccchHHHHHHHHHHH----hCCCCCceEEEcCCHHHHHHHHHHHHHhhcC--------------------
Q 013235 128 IKRIQHSTVLYLNHAIADFAEALAS----KMPGNLKVVFFTNSGTEANELAIMMARLYTG-------------------- 183 (447)
Q Consensus 128 l~~~~~~~~~~~~~~~~elae~L~~----~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~-------------------- 183 (447)
...+.+.. .+.++...+|+++|.+ .+|.++++|+|+||||||||+|||+||.|++
T Consensus 89 ~~~l~~~~-~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~ 167 (464)
T TIGR00699 89 ATTLINRP-ALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMD 167 (464)
T ss_pred HHhhcccc-cCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCccccccccccccccc
Confidence 44554433 3567778889999854 6777788999999999999999999998732
Q ss_pred -------CCeEEEEcCCcccCchhhhhccCCCCccc-cccCCCeEeecCCCCcCCCCCC-----C--hHHHHHHHHHHHH
Q 013235 184 -------CNDIISLRNAYHGNAAGTMGATAQSNWKF-NVVQTGVHHALNPDPYRGVFGA-----D--GEMYAKDVQDLID 248 (447)
Q Consensus 184 -------~~~ii~~~~~yHG~~~~~~~~t~~~~~~~-~~~~~g~~~~~~p~~~~~~~~~-----d--~~~~~~~le~~i~ 248 (447)
|.+||+|+++|||++.+++++++.+.++. ..+..++.++++|+ +++++.. + ...++++++++++
T Consensus 168 ~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~ 246 (464)
T TIGR00699 168 NQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIK 246 (464)
T ss_pred ccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCC-cccccccccccchhHHHHHHHHHHHHHH
Confidence 23899999999999999999988654332 22235667777775 3333221 1 2235677888887
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCC--CCEEEeeccc
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVV--PDIVTMAKGI 326 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~--pDivt~sK~l 326 (447)
.. ++++||||+||+||++|++++|++||++|+++|++||++||+|||||||||+| .+|+++++|+. |||+|+||+|
T Consensus 247 ~~-~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG-~~fa~e~~gv~~~PDi~t~gK~l 324 (464)
T TIGR00699 247 KW-HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATG-KFWAHEHWNLDDPPDMVTFSKKF 324 (464)
T ss_pred hc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCc-chhHHHhcCCCCCCCEEEehhhh
Confidence 53 45799999999999999999999999999999999999999999999999999 79999999997 9999999999
Q ss_pred c-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-CeeeE
Q 013235 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDV 404 (447)
Q Consensus 327 g-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~v 404 (447)
+ ||+++ .+ +.+.......|++||++||++|++++++|++++++++.++++++|++|+++|+++.++++ .+++|
T Consensus 325 g~gG~~~----~~-~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~v 399 (464)
T TIGR00699 325 QTAGYFF----HD-PAFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNL 399 (464)
T ss_pred ccCCccc----cc-hhccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeee
Confidence 6 67643 22 222211223478999999999999999999999999999999999999999999998998 79999
Q ss_pred e--ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 405 R--GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 405 r--g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
| |.|+|++|++. +...+.++.+.|+++||++..
T Consensus 400 Rg~G~Glm~gie~~--------~~~~~~~i~~~~~~~Gvl~~~ 434 (464)
T TIGR00699 400 RGKGRGTFIAWDTP--------DEAKRDKLLKKARNNGVNIGG 434 (464)
T ss_pred cccCeEEEEEEecC--------CHHHHHHHHHHHHHCCcEEec
Confidence 9 99999999983 223467899999999999863
No 47
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-69 Score=553.12 Aligned_cols=378 Identities=32% Similarity=0.443 Sum_probs=324.1
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccc
Q 013235 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYL 139 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~ 139 (447)
.+++++..+++...... ..|+++++|+|+||||.|||+||||++|++++++||+||+|++|+.+|++++.|... .++
T Consensus 4 ~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~ 81 (421)
T PRK06777 4 SELNQRRLEATPRGVGV--MCDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVP 81 (421)
T ss_pred HHHHHHHHHhcccccCc--CCCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccC
Confidence 45566655666444332 238999999999999999999999999999999999999999999999999876543 356
Q ss_pred chHHHHHHHHHHHhCCC-CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc--
Q 013235 140 NHAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV-- 215 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~-~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~-- 215 (447)
++...+|+++|++..|. +.++++|+||||||||.|+|+||.+|+|.+||+|+++|||++.+++++++.. .++..+.
T Consensus 82 ~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~ 161 (421)
T PRK06777 82 YASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPF 161 (421)
T ss_pred ChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCC
Confidence 88889999999999874 4678999999999999999999999999999999999999999999998752 3433321
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
..++.++++|+.+++ ...+..++.++++++. ..++++|+||+||+||++|+.++|++||++|+++|++||+++|+|
T Consensus 162 ~~~~~~~~~p~~~~~---~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK06777 162 PGSIFHALYPNELHG---VSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIAD 238 (421)
T ss_pred CCCcEEcCCCccccC---cCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 246677777765432 1223346678887763 235689999999999999999999999999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhh
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~ 374 (447)
||||||||+| ++|+++++++.||++|+||++++|+|+|++++++++++.+....+.+||++||++|++++++|++++++
T Consensus 239 Ev~tg~gr~g-~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~ 317 (421)
T PRK06777 239 EVQTGFARTG-KLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEE 317 (421)
T ss_pred chhhCCccCC-chhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999 688999999999999999999999999999999999998877778899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 375 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+++++++++|+++|+++.++++.+.+|||.|+|+++++.++. ...|+.+.+..+.+.|+++||++.+
T Consensus 318 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~i~~ 387 (421)
T PRK06777 318 KLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQ-TGKPSPEFTRQYQRQALEEGLLLLS 387 (421)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCc-cCCccHHHHHHHHHHHHhCCeEEee
Confidence 999999999999999999999889999999999999999997532 2234455667888899999999864
No 48
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.3e-69 Score=555.55 Aligned_cols=365 Identities=33% Similarity=0.475 Sum_probs=319.4
Q ss_pred cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCC-
Q 013235 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPG- 156 (447)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~- 156 (447)
.+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|... .+.++...+|+++|++.+|.
T Consensus 13 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~ 92 (420)
T TIGR00700 13 VTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS 92 (420)
T ss_pred CCCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC
Confidence 3458999999999999999999999999999999999999999999999999876544 35678889999999999984
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc--CCCeEeecCCCCcCCCCC
Q 013235 157 NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--QTGVHHALNPDPYRGVFG 233 (447)
Q Consensus 157 ~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~--~~g~~~~~~p~~~~~~~~ 233 (447)
+.++|+|+||||||||.|+|+||.+|+|.+||+++++|||++.+++++++.. .++..+. ..++..+++|++++.+++
T Consensus 93 ~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
T TIGR00700 93 GPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLL 172 (420)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 3578999999999999999999999999999999999999999999988753 2333221 256778888887775543
Q ss_pred CC---hHHHHHHHHHHHH-ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc
Q 013235 234 AD---GEMYAKDVQDLID-FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (447)
Q Consensus 234 ~d---~~~~~~~le~~i~-~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~ 309 (447)
.. ...+++.+++++. ...++++||||+||+||++|+++++++|+++|+++|++||+++|+||||+||||+| .+|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g-~~~a 251 (420)
T TIGR00700 173 DKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG-AMFA 251 (420)
T ss_pred ccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc-hhHH
Confidence 21 1123556777764 22357999999999999999999999999999999999999999999999999999 6889
Q ss_pred ccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 013235 310 FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKE 389 (447)
Q Consensus 310 ~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~ 389 (447)
++++++.|||++|||++++|+|+|++++++++++.+....+.+||++||++|++++++|++++++++.+++++++++|++
T Consensus 252 ~~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 331 (420)
T TIGR00700 252 CEHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTD 331 (420)
T ss_pred HhhcCCCCCEEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998876678899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 390 RLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 390 ~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+|+++.++++.+.+|||.|+|+++++.++ .+..|+...+.++.+.|+++||++.+
T Consensus 332 ~L~~l~~~~~~~~~vrg~G~~~~i~~~~~-~~~~~~~~~~~~l~~~~~~~Gv~i~p 386 (420)
T TIGR00700 332 RLTTLKAVDPRIGDVRGLGAMIAVELVDP-GTTEPDAGLAERIATAAHAAGLLLLT 386 (420)
T ss_pred HHHHHHhhCCCEEEeeccceEEEEEEecC-CCCCccHHHHHHHHHHHHHCCeEEec
Confidence 99999998998999999999999999753 23345566678899999999999864
No 49
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=9.8e-70 Score=554.51 Aligned_cols=351 Identities=26% Similarity=0.364 Sum_probs=303.9
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCCc
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~~ 159 (447)
.|+.+++|+|+|+||.|||+||||++|++++++||+||+|++|+++|++++.+... .+.++...+|+++|++.+|.+++
T Consensus 25 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~ 104 (428)
T PRK07986 25 PVYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLE 104 (428)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcC
Confidence 34789999999999999999999999999999999999999999999999876554 35788999999999999987788
Q ss_pred eEEEcCCHHHHHHHHHHHHHhh-----cCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc--CCCeEeecCCCCcCC-
Q 013235 160 VVFFTNSGTEANELAIMMARLY-----TGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--QTGVHHALNPDPYRG- 230 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~-----t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~--~~g~~~~~~p~~~~~- 230 (447)
+|+|+||||||||.|||+||.+ ++|.+||+++++|||.+.+++++++.. .++..+. .+++.+++.|+.+..
T Consensus 105 ~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 184 (428)
T PRK07986 105 CVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDG 184 (428)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccch
Confidence 9999999999999999999998 678999999999999999999997642 2322221 245666666643211
Q ss_pred CCCCChHHHHHHHHHHHHccCCCCeEEEEEccc-cCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc
Q 013235 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (447)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi-~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~ 309 (447)
.+ ....+++++++++.. ++++++||+||+ |+.||+++++++||++|+++|++||+++|+|||||||||+| ++|+
T Consensus 185 ~~---~~~d~~~l~~~l~~~-~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG-~~fa 259 (428)
T PRK07986 185 EW---DERDIAPFARLMAAH-RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG-KLFA 259 (428)
T ss_pred hh---HHHHHHHHHHHHHhC-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC-Ceee
Confidence 01 012256777777643 468999999996 99999999999999999999999999999999999999999 7999
Q ss_pred ccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC-----cccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHH
Q 013235 310 FEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-----NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVV 383 (447)
Q Consensus 310 ~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~-----~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~ 383 (447)
++++|++|||+||||+++|| +|+|++++++++++.+... .|.+||+|||++|++++++|+++++++++++++++
T Consensus 260 ~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~ 339 (428)
T PRK07986 260 CEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAI 339 (428)
T ss_pred ecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999 5999999999999998653 27799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 384 GSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 384 g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++|+++|+++. +++.+.+|||.|+|+++++.++. .+..+.+.|+++||++.+
T Consensus 340 g~~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~--------~~~~~~~~l~~~Gl~~~~ 392 (428)
T PRK07986 340 EAQLREELAPLR-DAPMVADVRVLGAIGVVETTRPV--------NMAALQRFFVEQGVWIRP 392 (428)
T ss_pred HHHHHHHHHHHh-cCCCEEeEeccceEEEEEeCCcc--------cHHHHHHHHHHCCcEEEe
Confidence 999999999986 48889999999999999996431 145789999999999864
No 50
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=3e-69 Score=552.13 Aligned_cols=376 Identities=28% Similarity=0.408 Sum_probs=321.6
Q ss_pred HHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccc
Q 013235 62 EILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLN 140 (447)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~ 140 (447)
++++....++.+... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|... .+.+
T Consensus 5 ~~~~~~~~~~~~~~~--~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~ 82 (421)
T PRK09792 5 EFHQRRLSATPRGVG--VMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPY 82 (421)
T ss_pred HHHHHHHhhcccccc--cCCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCC
Confidence 455544444433322 2237899999999999999999999999999999999999999999999999876543 3568
Q ss_pred hHHHHHHHHHHHhCCC-CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc--C
Q 013235 141 HAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--Q 216 (447)
Q Consensus 141 ~~~~elae~L~~~~~~-~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~--~ 216 (447)
+...+|+++|++..|. +.++++|+||||||||.|+|+||.+|+|.+||+++++|||++.+++++++.. .++..+. .
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~ 162 (421)
T PRK09792 83 ESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFP 162 (421)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCC
Confidence 8889999999999874 3568999999999999999999999999999999999999999999998742 3443322 2
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc-CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~-~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
.++.++++|+.+++ .+....++.++++++.. .++++|+||+||+|+++|++++|++|+++|+++|++||+++|+||
T Consensus 163 ~~~~~v~~p~~~~~---~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 239 (421)
T PRK09792 163 GSVYHVPYPSDLHG---ISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADE 239 (421)
T ss_pred CCcEEcCCCccccc---ccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 46777777765543 12233467788887642 346899999999999999999999999999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhh
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDK 375 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~ 375 (447)
|||||||+| .+|+++++++.|||+||||+|+||+|+|++++++++++.+....+.+||++||++|++++++|+++++++
T Consensus 240 v~tg~gr~G-~~~a~~~~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~ 318 (421)
T PRK09792 240 VQSGFARTG-KLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKES 318 (421)
T ss_pred cccCCCCCC-chhHHHhcCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 999999999 6899999999999999999999999999999999999988776788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 376 LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 376 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++++++++++++++.|+++.++++.+.++||.|+|++++|.++. .+.|+.....++++.|+++||++.
T Consensus 319 ~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~-~~~~~~~~~~~l~~~~~~~Gv~i~ 386 (421)
T PRK09792 319 LCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQ-TGEPSAAIAQKIQQRALAQGLLLL 386 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCc-cCCcchHHHHHHHHHHHHCCcEEe
Confidence 99999999999999999999999999999999999999997432 233444456789999999999985
No 51
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=6.7e-69 Score=553.00 Aligned_cols=375 Identities=25% Similarity=0.359 Sum_probs=309.3
Q ss_pred CCCHHHHHHHHhhhcCCccccc---c----CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHH
Q 013235 57 GPSADEILAKRKTFLSPSLFHL---Y----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIK 129 (447)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~---~----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~ 129 (447)
.+++.+++++.+++++...... + ..|+++++|+|+||||+|||+||||.+|++++++||+||+|.+|+.+|++
T Consensus 50 ~~~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~ 129 (474)
T PLN02482 50 TTKSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK 129 (474)
T ss_pred ChHHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHh
Confidence 4678999999999986543221 1 35899999999999999999999999999999999999999999999999
Q ss_pred hcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 130 RIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 130 ~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
++.+. ..+++...+|+|+|++.+|. .++|+|+||||||++.|||+||.+|||.+||.|+++|||++...+..+....
T Consensus 130 ~~~~~--~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~ 206 (474)
T PLN02482 130 KGTSF--GAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGV 206 (474)
T ss_pred hCCCC--CCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCc
Confidence 87542 34688889999999999986 7899999999999999999999999999999999999998865443322111
Q ss_pred cccccc-CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC
Q 013235 210 WKFNVV-QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (447)
Q Consensus 210 ~~~~~~-~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g 288 (447)
.....+ ..++.....++....+|+ | +++++++++.. ++++|+||+||+|+++|+++|+++||++|+++|++||
T Consensus 207 ~~~~~~~~~g~~~~~~~~~~~~~~n-d----~~~l~~~l~~~-~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g 280 (474)
T PLN02482 207 ATLGLPDSPGVPKAATSATLTAPYN-D----LEAVKKLFEAN-KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENG 280 (474)
T ss_pred cccCCCCCCCCCCCCCCCeEEecCC-C----hHHHHHHHHhC-CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 111111 123222222233344553 4 56788887653 5689999999999999999999999999999999999
Q ss_pred CEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcC---CcccccCCCChHHHHHHH
Q 013235 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---RNYFNTFGGNPVCTAAGH 365 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~---~~~~~T~~~np~a~aaal 365 (447)
+++|+|||+||| |+| .+|+++++|++|||+||||+||||+|+|++++++++++.+.. ..|.+||++||++|++++
T Consensus 281 ~lLI~DEV~tGf-R~g-~~ga~~~~gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAal 358 (474)
T PLN02482 281 ALLVFDEVMTGF-RIA-YGGAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGI 358 (474)
T ss_pred CEEEEeccccCe-ecC-cchHhHHhCCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHH
Confidence 999999999999 999 688889999999999999999999999999999999998863 236789999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC--Ce-eeEeecceeEEEEEeeCCC-----CCCCCHHHHHHHHHHHH
Q 013235 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG--II-GDVRGRGFLLGVEFVTDRQ-----LKTPAKAETLYIMDKMK 437 (447)
Q Consensus 366 a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~--~i-~~vrg~Gl~~giel~~~~~-----~~~p~~~~~~~~~~~l~ 437 (447)
++|++++++++.+++++++++|+++|+++..+++ .+ .+++| |++++|.+++. .+.++.....++++.|+
T Consensus 359 a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g---~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~ 435 (474)
T PLN02482 359 HTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG---MFGFFFTEGPVYNFADAKKSDTAKFARFHRGML 435 (474)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce---EEEEEEecCCccChhhhccCCHHHHHHHHHHHH
Confidence 9999999899999999999999999999988864 33 34554 88999986532 12234455678999999
Q ss_pred hCCceeec
Q 013235 438 GICALFFS 445 (447)
Q Consensus 438 ~~Gvlv~~ 445 (447)
++||++.+
T Consensus 436 ~~Gv~~~~ 443 (474)
T PLN02482 436 EEGVYLAP 443 (474)
T ss_pred HCCeEEec
Confidence 99999864
No 52
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-69 Score=515.54 Aligned_cols=353 Identities=32% Similarity=0.481 Sum_probs=306.3
Q ss_pred ccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCC-C
Q 013235 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP-G 156 (447)
Q Consensus 78 ~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~-~ 156 (447)
+.+.|+++.+++|+.+||.||++||||+++|++..+||+||+|.+|+.+|+.++.|+++.+.+....+++++|.+... .
T Consensus 35 ~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~ 114 (433)
T KOG1401|consen 35 YARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKG 114 (433)
T ss_pred cCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCC
Confidence 456789999999999999999999999999999999999999999999999999999887776668999999998873 3
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHhhcCCC------eEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCc
Q 013235 157 NLKVVFFTNSGTEANELAIMMARLYTGCN------DIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPY 228 (447)
Q Consensus 157 ~~~~v~~~~sGseA~e~Aik~ar~~t~~~------~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~ 228 (447)
..++|+|+||||||||.|||+||+.+..+ ++|.|+++|||++.+++++++.+.|+..+.+ +++....+
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y---- 190 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY---- 190 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc----
Confidence 47899999999999999999999987654 4999999999999999999988877765432 34444332
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcc
Q 013235 229 RGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308 (447)
Q Consensus 229 ~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~ 308 (447)
+| ..+++++++.+ .++|||||+||+||+||++++.|+|+..|+++|+++|++||+|||||||||+| ..|
T Consensus 191 -----nd----~t~l~k~~~~h-~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g-~~~ 259 (433)
T KOG1401|consen 191 -----ND----STALEKLFESH-KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG-YGW 259 (433)
T ss_pred -----CC----HHHHHHHHHhC-CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc-hHH
Confidence 33 67888988875 45899999999999999999999999999999999999999999999999999 799
Q ss_pred cccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcc---cccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 013235 309 GFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNY---FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGS 385 (447)
Q Consensus 309 ~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~---~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~ 385 (447)
++++++++|||.|++|.|+||+|+||+++++++++.+....+ ++||+|||++|.++..+|+.+.+++..+++...++
T Consensus 260 a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k 339 (433)
T KOG1401|consen 260 AQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGK 339 (433)
T ss_pred HHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988765 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCe-eeEeecceeEEEEEeeCCCCCCCC----HHHHHHHHHHHHhCCceeec
Q 013235 386 YLKERLTALKDKYGII-GDVRGRGFLLGVEFVTDRQLKTPA----KAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 386 ~l~~~L~~l~~~~~~i-~~vrg~Gl~~giel~~~~~~~~p~----~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.|++.|.+...+.+.. ...+|+|+++|+++..+....... ......+...+++.|+++.+
T Consensus 340 ~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P 404 (433)
T KOG1401|consen 340 ELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAP 404 (433)
T ss_pred HHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEec
Confidence 9999999998888654 344999999999997543221111 11223444555667887765
No 53
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.2e-67 Score=519.16 Aligned_cols=379 Identities=26% Similarity=0.394 Sum_probs=314.8
Q ss_pred CCCHHHHHHHHhhhcCCccc----cccC---CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHH
Q 013235 57 GPSADEILAKRKTFLSPSLF----HLYS---KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIK 129 (447)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~----~~~~---~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~ 129 (447)
.++++++.++.+++++.+.. .+.. .|+++.+|+|+||||+|||+||||+.+++.+.|||+||.|++|+++|++
T Consensus 4 ~~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~ 83 (432)
T COG0001 4 FPKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLE 83 (432)
T ss_pred ccchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHH
Confidence 35788999999988864432 1222 6999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 130 RIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 130 ~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
+... ...+++...+++|.|.+++|. .+.|.|+||||||+..|||+||.+|||++||.|+|+|||+.+..+.-.+...
T Consensus 84 ~G~~--fg~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~ 160 (432)
T COG0001 84 RGLS--FGAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGA 160 (432)
T ss_pred hcCC--CCCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCc
Confidence 9733 344788899999999999985 6899999999999999999999999999999999999999999886544222
Q ss_pred ccccccC-CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC
Q 013235 210 WKFNVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (447)
Q Consensus 210 ~~~~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g 288 (447)
-.+..|. .|++.-...+..-.+| || ++.+++++++. ++++||||+||++|+.|.++|.++||++|+++|++||
T Consensus 161 ~t~g~p~s~Gvp~~~a~~ti~~~y-ND----~~al~~~~~~~-g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G 234 (432)
T COG0001 161 ATLGSPSSPGVPADVAKHTLVLPY-ND----LEALEEAFEEY-GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHG 234 (432)
T ss_pred ccCCCCCCCCCChhhhccEEEecC-CC----HHHHHHHHHHc-CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 2222122 3332211111112233 45 77888888764 5699999999999999999999999999999999999
Q ss_pred CEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCc---ccccCCCChHHHHHHH
Q 013235 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN---YFNTFGGNPVCTAAGH 365 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~---~~~T~~~np~a~aaal 365 (447)
++||+|||.||| |.. ...+.++||++||+.||||.+|||+|+|++.+++++|+.+.... +.+||+|||++++|++
T Consensus 235 ~lLI~DEViTGF-R~~-~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~ 312 (432)
T COG0001 235 ALLIFDEVITGF-RVA-LGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGL 312 (432)
T ss_pred cEEEEecchhhc-ccC-CcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHH
Confidence 999999999999 443 23345789999999999999999999999999999999887643 5599999999999999
Q ss_pred HHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCC-----CCCHHHHHHHHHHHHhC
Q 013235 366 AVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK-----TPAKAETLYIMDKMKGI 439 (447)
Q Consensus 366 a~L~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~-----~p~~~~~~~~~~~l~~~ 439 (447)
++|+.++++ ...+++.+.+++|+++|++..+++++...|.+.|.|+.|.|.+.+... ..+.+...++...|+++
T Consensus 313 atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~ 392 (432)
T COG0001 313 ATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR 392 (432)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC
Confidence 999999874 589999999999999999999999999999999999999998754221 11223455677799999
Q ss_pred Cceeecc
Q 013235 440 CALFFSQ 446 (447)
Q Consensus 440 Gvlv~~~ 446 (447)
||++.++
T Consensus 393 GV~l~ps 399 (432)
T COG0001 393 GVYLAPS 399 (432)
T ss_pred CcccCCc
Confidence 9998753
No 54
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=3.6e-68 Score=531.72 Aligned_cols=324 Identities=33% Similarity=0.567 Sum_probs=285.0
Q ss_pred ccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCC
Q 013235 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN 157 (447)
Q Consensus 78 ~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~ 157 (447)
.|+.|+.+++|+|+||||.|||+||||.+|+++.++||+||+|++|+++|++++.+....+.++...+|+++|++.. +
T Consensus 3 ~~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~--~ 80 (364)
T PRK04013 3 LYRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV--N 80 (364)
T ss_pred CcCCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc--C
Confidence 46789999999999999999999999999999999999999999999999999877666788999999999999987 3
Q ss_pred CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCCCCCC
Q 013235 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGAD 235 (447)
Q Consensus 158 ~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d 235 (447)
.++++|+||||||+|+|+|+||.+++|++||+++++|||++.+++++++.+.++..+.+ .++..++++ |
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~---------d 151 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN---------D 151 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC---------C
Confidence 57899999999999999999999999999999999999999999999886655443322 345444432 2
Q ss_pred hHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCC
Q 013235 236 GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV 315 (447)
Q Consensus 236 ~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv 315 (447)
.+.+++.+. +++++||+||+||++|++++|++||++|+++|++||+++|+||||||| |+| ++|+++++++
T Consensus 152 ----~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG-~~~a~~~~gv 221 (364)
T PRK04013 152 ----VEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG-KFLAIEHYKV 221 (364)
T ss_pred ----HHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCC-chhHHHhcCC
Confidence 456676664 489999999999999999999999999999999999999999999999 999 7999999999
Q ss_pred CCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 013235 316 VPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK 395 (447)
Q Consensus 316 ~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~ 395 (447)
.|||+||||+++||+|+|+++.++++ ....|.+||+|||++|++++++|++|+++++.++++++ |+++.
T Consensus 222 ~PDiv~~gK~lggG~P~~a~~~~~~~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~ 290 (364)
T PRK04013 222 EPDIVTMGKGIGNGVPVSLTLTNFDV----ERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK 290 (364)
T ss_pred CCCEEEecccccCCceeEEEEecccc----cCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc
Confidence 99999999999999999999999886 23458899999999999999999999999999998875 33442
Q ss_pred HhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 396 DKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 396 ~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+.+.+|||.|+|+++||.++ +..+.+.|+++||++..
T Consensus 291 --~~~v~~vRG~Gl~~gve~~~~----------~~~i~~~~~~~Gll~~~ 328 (364)
T PRK04013 291 --GERVVTTRGRGLMIGIVLKKP----------VGKYVEELQNRGYLVHT 328 (364)
T ss_pred --cCcceeeeeCcEEEEEEeCCc----------HHHHHHHHHhCCcEEee
Confidence 267899999999999999531 35688999999999864
No 55
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2e-67 Score=535.65 Aligned_cols=342 Identities=30% Similarity=0.517 Sum_probs=303.0
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
..|+++++++|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|....+.++...+|+++|++..|. .+
T Consensus 21 ~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~ 99 (408)
T PRK04612 21 PRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AE 99 (408)
T ss_pred CCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CC
Confidence 45899999999999999999999999999999999999999999999999987766556788899999999999875 47
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhc-------CCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCC
Q 013235 160 VVFFTNSGTEANELAIMMARLYT-------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRG 230 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t-------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~ 230 (447)
+|+|++|||||||.|||+||.|+ +|++||+|+++|||++.+++++++.+.++..+. ..++..+++|
T Consensus 100 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~----- 174 (408)
T PRK04612 100 KVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN----- 174 (408)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCC-----
Confidence 89999999999999999999984 356899999999999999999988665554332 1344444433
Q ss_pred CCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc
Q 013235 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310 (447)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~ 310 (447)
| .+.+++++. ++++++||+||+|++||+++++++|+++|+++|++||+++|+||||+||||+| .+|+.
T Consensus 175 ----d----~~~l~~~~~---~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G-~~~a~ 242 (408)
T PRK04612 175 ----D----VEALEAAMA---GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG-TLFAH 242 (408)
T ss_pred ----C----HHHHHHhhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-chhhh
Confidence 2 466777764 45899999999999999999999999999999999999999999999999999 68888
Q ss_pred cccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 013235 311 EAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKER 390 (447)
Q Consensus 311 ~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~ 390 (447)
+++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|++++++++.+++++++++|+++
T Consensus 243 ~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 322 (408)
T PRK04612 243 WQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAG 322 (408)
T ss_pred hhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999988776788999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 391 L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
|+++.++++.+.+|||.|+|++++|+++. ...+..+.+.|+++||++.+
T Consensus 323 l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~------~~~a~~i~~~l~~~Gvlv~~ 371 (408)
T PRK04612 323 LEALNAEFGVFAQVRGRGLMLGAVLAPAH------AGQAGAILDLAAEHGLLLLQ 371 (408)
T ss_pred HHHHHhhCCCeeeeeccceEEEEEecCch------hhHHHHHHHHHHHCCeEEee
Confidence 99999999999999999999999997421 12356788999999999853
No 56
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.3e-67 Score=536.22 Aligned_cols=375 Identities=22% Similarity=0.287 Sum_probs=309.6
Q ss_pred CCHHHHHHHHhhhcCCcccc---cc----CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHh
Q 013235 58 PSADEILAKRKTFLSPSLFH---LY----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~---~~----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~ 130 (447)
+.+.+++++.+++++....+ .+ ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|+++
T Consensus 5 ~~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~ 84 (433)
T PRK00615 5 QEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAER 84 (433)
T ss_pred HHHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHh
Confidence 56788889888888654322 22 368999999999999999999999999999999999999999999999998
Q ss_pred cccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCc---hhhhhccCC
Q 013235 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA---AGTMGATAQ 207 (447)
Q Consensus 131 ~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~---~~~~~~t~~ 207 (447)
+.+ ..++++...+|+++|.+.+|...++|+|+||||||+|.|||+||.+|||.+||.++++|||++ .+++++++.
T Consensus 85 ~~~--~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~ 162 (433)
T PRK00615 85 GTS--YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSET 162 (433)
T ss_pred CCC--CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCC
Confidence 743 345688899999999999986667999999999999999999999999999999999999998 556666543
Q ss_pred CCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHh
Q 013235 208 SNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA 287 (447)
Q Consensus 208 ~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~ 287 (447)
........ .+ ...+.++....++ +| .++++++++... +++++||+||+|+++|+++|+++||++|+++|++|
T Consensus 163 ~~~~~~~~-~~-~~~~~~~~~~~~~-~d----~~~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~ 234 (433)
T PRK00615 163 SLDTLTHL-VD-TDLAHPLTLSLPY-ND----FQIFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT 234 (433)
T ss_pred CcCcCCCC-CC-CCCCCCCeEeCCC-CC----HHHHHHHHHhcC-CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 21110000 00 0000111111223 33 567888886543 58999999999999999999999999999999999
Q ss_pred CCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCC---cccccCCCChHHHHHH
Q 013235 288 GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR---NYFNTFGGNPVCTAAG 364 (447)
Q Consensus 288 g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~---~~~~T~~~np~a~aaa 364 (447)
|+++|+||||||| |+| .+|+++++|+.|||+||||++|||+|+|++++++++++.+... .+.+||++||++|+++
T Consensus 235 g~llI~DEv~tG~-R~G-~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~ 312 (433)
T PRK00615 235 GSLSIMDEVVTGF-RVA-QGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAG 312 (433)
T ss_pred CCEEEEEcccccc-ccc-HhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHH
Confidence 9999999999999 999 6888899999999999999999999999999999999988542 2668999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCC-eeeEeecceeEEEEEeeCCCC--C---CCCHHHHHHHHHHHHh
Q 013235 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGI-IGDVRGRGFLLGVEFVTDRQL--K---TPAKAETLYIMDKMKG 438 (447)
Q Consensus 365 la~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~-i~~vrg~Gl~~giel~~~~~~--~---~p~~~~~~~~~~~l~~ 438 (447)
+++|++++++++++++++++++|+++|+++..+++. +..+| .|+|++++|.+++.+ + ..+.+...++.++|++
T Consensus 313 la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 391 (433)
T PRK00615 313 KASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS 391 (433)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999877433 77788 999999999865432 1 1133456789999999
Q ss_pred CCceeec
Q 013235 439 ICALFFS 445 (447)
Q Consensus 439 ~Gvlv~~ 445 (447)
+||++.+
T Consensus 392 ~Gv~~~~ 398 (433)
T PRK00615 392 KGVYLSP 398 (433)
T ss_pred CCeeecC
Confidence 9999864
No 57
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.9e-67 Score=537.36 Aligned_cols=349 Identities=26% Similarity=0.397 Sum_probs=300.4
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhC--CCC
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKM--PGN 157 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~--~~~ 157 (447)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|+++..+... .+.++...+|+++|++.+ |.+
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 96 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG 96 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC
Confidence 58999999999999999999999999999999999999999999999997655433 345788899999999985 322
Q ss_pred Cc-eEEE-cCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc--cCCCeEeecCCCCcCCCCC
Q 013235 158 LK-VVFF-TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFG 233 (447)
Q Consensus 158 ~~-~v~~-~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~--~~~g~~~~~~p~~~~~~~~ 233 (447)
.. +++| +||||||||.|+|+||.+|+|++||+|+++|||++.+++++++...++... +..++..+|+|+...
T Consensus 97 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~---- 172 (412)
T TIGR02407 97 LDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLG---- 172 (412)
T ss_pred CCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccc----
Confidence 32 4555 699999999999999999999999999999999999999998865444333 224666676664321
Q ss_pred CChHHHHHHHHHHHHccC--CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc
Q 013235 234 ADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (447)
Q Consensus 234 ~d~~~~~~~le~~i~~~~--~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~ 311 (447)
+....++.+++++++.. .+++|+||+||+||++|++++|++||++|+++|++||+++|+||||||||||| ++|+++
T Consensus 173 -~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-~~~a~~ 250 (412)
T TIGR02407 173 -GDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG-TFFSFE 250 (412)
T ss_pred -cchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-hhHHhc
Confidence 11123667888886432 25799999999999999999999999999999999999999999999999999 799999
Q ss_pred ccCCCCCEEEeeccccC-CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHH
Q 013235 312 AHGVVPDIVTMAKGIGN-GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV-IQKDKLQNNAHVVGSYLKE 389 (447)
Q Consensus 312 ~~gv~pDivt~sK~lg~-G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~-i~~~~l~~~~~~~g~~l~~ 389 (447)
++++.|||+++||+|+| |+|+|++++++++ +.+....+.+||++||++|+++.++|++ ++++++.+++++++++|++
T Consensus 251 ~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~ 329 (412)
T TIGR02407 251 PAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQE 329 (412)
T ss_pred ccCCCCCEEEechhccCCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999998 9999999999987 6665556889999999999999999995 8888899999999999999
Q ss_pred HHHHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 390 RLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 390 ~L~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+|+++.++++ .+.++||.|+|++++|.+ ...+.++.+.|+++||++.
T Consensus 330 ~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~--------~~~~~~~~~~~~~~Gv~v~ 377 (412)
T TIGR02407 330 RLDRIVAEYPELIKQVRGRGLMQGIECGD--------GDLAGKIAKAAFENGLIIE 377 (412)
T ss_pred HHHHHHhhCCCceEeeecceeEEEEEecC--------hHHHHHHHHHHHHCCCEEe
Confidence 9999999887 688999999999999953 2345679999999999985
No 58
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=2.8e-67 Score=538.44 Aligned_cols=350 Identities=28% Similarity=0.443 Sum_probs=300.4
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhC--CCC
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKM--PGN 157 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~--~~~ 157 (447)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+++|+++..+... .+.++...+|+++|++.+ |.+
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 100 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG 100 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC
Confidence 58999999999999999999999999999999999999999999999998655444 346788899999999975 333
Q ss_pred Cc-eEEE-cCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc--cCCCeEeecCCCCcCCCCC
Q 013235 158 LK-VVFF-TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFG 233 (447)
Q Consensus 158 ~~-~v~~-~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~--~~~g~~~~~~p~~~~~~~~ 233 (447)
.+ +++| +||||||||.|||+||.+|+|.+||+++++|||++.+++++++...++..+ +..++.++++|+.++..
T Consensus 101 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-- 178 (425)
T PRK09264 101 LDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGD-- 178 (425)
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccc--
Confidence 43 5656 599999999999999999999999999999999999999998866554332 22567778777643211
Q ss_pred CChHHHHHHHHHHHHccC--CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc
Q 013235 234 ADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (447)
Q Consensus 234 ~d~~~~~~~le~~i~~~~--~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~ 311 (447)
...++++++++++.. ++++|+||+||+||++|++++|++||++|+++|++||+++|+|||||||||+| ++|+++
T Consensus 179 ---~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG-~~~~~~ 254 (425)
T PRK09264 179 ---VDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG-TFFSFE 254 (425)
T ss_pred ---hhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc-HHHHHh
Confidence 112567888886532 35799999999999999999999999999999999999999999999999999 789999
Q ss_pred ccCCCCCEEEeeccccC-CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHH
Q 013235 312 AHGVVPDIVTMAKGIGN-GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL-KVIQKDKLQNNAHVVGSYLKE 389 (447)
Q Consensus 312 ~~gv~pDivt~sK~lg~-G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L-~~i~~~~l~~~~~~~g~~l~~ 389 (447)
++++.|||+|+||++++ |+|+|++++++++. .+....+.+||++||++|++++++| ++++++++.+++++++++|++
T Consensus 255 ~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~ 333 (425)
T PRK09264 255 RAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRE 333 (425)
T ss_pred hcCCCCCEEEeccccCCCccceEEEEEchhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999999984 5554557899999999999999999 667777899999999999999
Q ss_pred HHHHHHHhcCC-eeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 390 RLTALKDKYGI-IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 390 ~L~~l~~~~~~-i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+|+++.++++. +.++||.|+|+++++.+ .....++.+.|+++||++.+
T Consensus 334 ~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~--------~~~~~~l~~~~~~~Gv~~~~ 382 (425)
T PRK09264 334 RLEEIAAKYPGLGAEVRGRGMMQGIDFGD--------GELAGKIAAEAFENGLIIET 382 (425)
T ss_pred HHHHHHHhCCCceecceecccEEEEEecC--------hHHHHHHHHHHHHCCCEEec
Confidence 99999888874 58899999999999953 23456789999999999853
No 59
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2e-66 Score=532.60 Aligned_cols=351 Identities=28% Similarity=0.457 Sum_probs=305.2
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-cccchHHHHHHHHHHHhCCCCCc
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~~~ 159 (447)
.|+++.+|+|+||||.|||+||||++|++++++||+||+|.+|+++|++++.+... .++++...+|+++|++.+|.+.+
T Consensus 24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 103 (423)
T PRK05964 24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLD 103 (423)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 58999999999999999999999999999999999999999999999999876544 46788899999999999987788
Q ss_pred eEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCC
Q 013235 160 VVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGV 231 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~ 231 (447)
+|+|+||||||||+|+|+||.+ |+|.+||+++++|||++.+++++++...++..... .++..+++|+.
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~---- 179 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD---- 179 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc----
Confidence 9999999999999999999998 68999999999999999999999876544322211 34555655431
Q ss_pred CCCChHHHHHHHHHHHHccCCCCeEEEEEcc-ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc
Q 013235 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310 (447)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~aavi~Ep-i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~ 310 (447)
+..+.+++++++++... ++++|+||+|| +|+++|+++++++||++|+++|++||+++|+|||||||||+| .+|++
T Consensus 180 --d~~~~~~~~l~~~l~~~-~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G-~~~a~ 255 (423)
T PRK05964 180 --GYEQATLDALEALLEKH-AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG-TLFAC 255 (423)
T ss_pred --hhHHHHHHHHHHHHHhC-CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc-chhHH
Confidence 11234577788888643 46899999999 799999999999999999999999999999999999999999 78889
Q ss_pred cccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCC------cccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHH
Q 013235 311 EAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVV 383 (447)
Q Consensus 311 ~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~------~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~ 383 (447)
+++++.|||+++||+++|| +|+|++++++++++.+... .|.+||++||++|++++++|++++++++.++++++
T Consensus 256 ~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~ 335 (423)
T PRK05964 256 EQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAAL 335 (423)
T ss_pred HhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999998 7999999999999987532 36789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 384 GSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 384 g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++|+++|+++. +++.+.++||.|+|+++++.++.. .....++++.|+++||++..
T Consensus 336 g~~l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~~-----~~~~~~l~~~l~~~Gv~v~~ 391 (423)
T PRK05964 336 SAGLAEGLEPFR-DLPGVADVRVLGAIGAVELDRPVL-----ERDGPALRAFALERGVLLRP 391 (423)
T ss_pred HHHHHHHHHhhc-cCCCeEEeecccEEEEEEeccCcc-----hhHHHHHHHHHHHCCeEEEe
Confidence 999999999984 577888999999999999965421 12356789999999999864
No 60
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=4.2e-66 Score=531.38 Aligned_cols=371 Identities=21% Similarity=0.258 Sum_probs=303.9
Q ss_pred CCHHHHHHHHhhhcCCcc-cc---cc--CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhc
Q 013235 58 PSADEILAKRKTFLSPSL-FH---LY--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI 131 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~---~~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~ 131 (447)
++|.+++++.+++++... .+ .+ ..|+++++|+|+|+||+|||+||||.++++++++||+||+|.+|+++|++++
T Consensus 28 ~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~ 107 (453)
T PRK07046 28 PRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRG 107 (453)
T ss_pred hhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhC
Confidence 567889999998886543 22 12 3589999999999999999999999999999999999999999999999987
Q ss_pred ccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhcc--CCCC
Q 013235 132 QHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGAT--AQSN 209 (447)
Q Consensus 132 ~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t--~~~~ 209 (447)
.+ ..++++...+|+|+|++..+ .++|+|+||||||++.|+|+||.+|||++||.|+++|||++.+++... +...
T Consensus 108 ~~--~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~ 183 (453)
T PRK07046 108 LT--TMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPV 183 (453)
T ss_pred CC--CCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCC
Confidence 43 34578899999999999984 689999999999999999999999999999999999999988776542 1111
Q ss_pred ccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC
Q 013235 210 WKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (447)
Q Consensus 210 ~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ 289 (447)
++... .++..-..++....+| +| ++.+++++. ++++||||+||+|+++|.++|+++||++|+++|++||+
T Consensus 184 ~~~~~--~g~~~~~~~~~~~~~~-nd----~~~l~~~l~---~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~ 253 (453)
T PRK07046 184 QRPGL--LGQVHDLTATTRVVEF-ND----LAALEAALA---DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGT 253 (453)
T ss_pred CCCCC--CCCCccccCceEeeCC-CC----HHHHHHHhC---CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 11111 1111000111122334 34 577887774 35899999999999999999999999999999999999
Q ss_pred EEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcC-------C--cccccCCCChHH
Q 013235 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR-------R--NYFNTFGGNPVC 360 (447)
Q Consensus 290 llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~-------~--~~~~T~~~np~a 360 (447)
++|+|||+| | |+| .....+++|++|||+||||+||||+|+|++++++++++.+.. . .+.+||++||++
T Consensus 254 llI~DEV~t-f-r~g-~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~ 330 (453)
T PRK07046 254 LLVIDETHT-I-SSG-PGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALA 330 (453)
T ss_pred EEEEEcccc-C-ccC-CcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHH
Confidence 999999999 5 354 122346789999999999999999999999999999998752 1 366899999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCC-----C-CCHHHHHHHHH
Q 013235 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK-----T-PAKAETLYIMD 434 (447)
Q Consensus 361 ~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~-----~-p~~~~~~~~~~ 434 (447)
|++++++|++++++++++++++++++|+++|+++.++++++..|+|.|+|+.++|.+++... . .+......++.
T Consensus 331 ~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (453)
T PRK07046 331 MAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHL 410 (453)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999986542210 1 13345567888
Q ss_pred HHHhCCceeec
Q 013235 435 KMKGICALFFS 445 (447)
Q Consensus 435 ~l~~~Gvlv~~ 445 (447)
.|+++||++.+
T Consensus 411 ~~~~~Gv~~~~ 421 (453)
T PRK07046 411 YLLNRGVLITP 421 (453)
T ss_pred HHHHCCCEEec
Confidence 99999999864
No 61
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=2.8e-66 Score=557.91 Aligned_cols=386 Identities=19% Similarity=0.221 Sum_probs=309.6
Q ss_pred CCHHHHHHHHhhhcCCccccc--c--CCCeEEEeeccc----EEEecCCC----eEEEecCCcccccCC-CCCHHHHHHH
Q 013235 58 PSADEILAKRKTFLSPSLFHL--Y--SKPLNVVDGKMQ----YLFDENGR----RYLDAFGGIATVCCG-HCHPYVVDSI 124 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~--~--~~p~~~~~g~G~----~l~d~dG~----~ylD~~~g~~~~~lG-h~~p~v~~A~ 124 (447)
++.+++.++.+++++..+... + ..|.+|++++|. |++|.+|+ +|||++++++++++| |+||+|++|+
T Consensus 312 ~~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai 391 (817)
T PLN02974 312 QRLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAV 391 (817)
T ss_pred HHHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHH
Confidence 344666777777876543221 1 247889999998 99999998 999999999999999 6899999999
Q ss_pred HHHHHhcccccc-cccchHHHHHHHHHHHhCCCC-CceEEEcCCHHHHHHHHHHHHH-hhc------------------C
Q 013235 125 VNQIKRIQHSTV-LYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMAR-LYT------------------G 183 (447)
Q Consensus 125 ~~~l~~~~~~~~-~~~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~e~Aik~ar-~~t------------------~ 183 (447)
.+|++++.|... .+.++...+|+|+|.+..+.+ +++|||++|||||||.|||+|| .|+ +
T Consensus 392 ~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~ 471 (817)
T PLN02974 392 AYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLI 471 (817)
T ss_pred HHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCC
Confidence 999999988765 467899999999999955423 6899999999999999999995 452 4
Q ss_pred CCeEEEEcCCcccCchhhhhccCCCCccccc--c--CCCeEeecCC--------------CCcCCC-------CCC----
Q 013235 184 CNDIISLRNAYHGNAAGTMGATAQSNWKFNV--V--QTGVHHALNP--------------DPYRGV-------FGA---- 234 (447)
Q Consensus 184 ~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~--~--~~g~~~~~~p--------------~~~~~~-------~~~---- 234 (447)
|.+||+++++|||.|.+++++++.+.+...+ + .+...+++.| ..++.. |.+
T Consensus 472 r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 551 (817)
T PLN02974 472 ELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEV 551 (817)
T ss_pred CCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccccccccc
Confidence 7789999999999999999999754433211 1 1122222222 222111 100
Q ss_pred -----C----hHHHHHHHHHHHHc----cCCCCeEEEEEccc-cCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCc
Q 013235 235 -----D----GEMYAKDVQDLIDF----GTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300 (447)
Q Consensus 235 -----d----~~~~~~~le~~i~~----~~~~~~aavi~Epi-~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGf 300 (447)
+ .+.+.+.+++.|+. ..++++||||+||+ ||.||++++|++|+++|+++|++||++||+|||+|||
T Consensus 552 f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGf 631 (817)
T PLN02974 552 FDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGL 631 (817)
T ss_pred ccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCC
Confidence 0 12345677777763 34578999999995 9999999999999999999999999999999999999
Q ss_pred cccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcC------CcccccCCCChHHHHHHHHHHHHHhh
Q 013235 301 ARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR------RNYFNTFGGNPVCTAAGHAVLKVIQK 373 (447)
Q Consensus 301 gr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~------~~~~~T~~~np~a~aaala~L~~i~~ 373 (447)
|||| ++|+++++|++|||+|+||+|+|| +|+|++++++++++.+.. ..|++||+|||++||+|+++|+++++
T Consensus 632 GRtG-~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~ 710 (817)
T PLN02974 632 WRLG-VESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKD 710 (817)
T ss_pred Cccc-chhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHc
Confidence 9999 799999999999999999999999 599999999999998853 13789999999999999999999998
Q ss_pred hh----HHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCC-HHHHHHHHHHHH-hCCceeec
Q 013235 374 DK----LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA-KAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 374 ~~----l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~-~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
++ +.++.++++++|++.|.+...+++.+++|||.|+|++|||++++.+ .|. ...+.++.+.|+ ++||++++
T Consensus 711 ~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~~~~~a~~v~~~~~~~~Gl~~r~ 787 (817)
T PLN02974 711 PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGYSSLYARSVVRRLRREDGIYARP 787 (817)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-cccchHHHHHHHHHHHHhCCEEEEe
Confidence 74 5555666667777777444467899999999999999999876543 232 234677889999 99999874
No 62
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=4.7e-66 Score=530.46 Aligned_cols=349 Identities=27% Similarity=0.391 Sum_probs=287.9
Q ss_pred CeEEEeecccEEEec-CCCeEEEecCCcccccCCCCCHHHHH--HHHHHHHhccc--ccc-cccchHHHHHHHHHHHhC-
Q 013235 82 PLNVVDGKMQYLFDE-NGRRYLDAFGGIATVCCGHCHPYVVD--SIVNQIKRIQH--STV-LYLNHAIADFAEALASKM- 154 (447)
Q Consensus 82 p~~~~~g~G~~l~d~-dG~~ylD~~~g~~~~~lGh~~p~v~~--A~~~~l~~~~~--~~~-~~~~~~~~elae~L~~~~- 154 (447)
++.+.+++|+||||. |||+||||.+|++++++||+||+|++ |+++|++++.+ .+. .+.++...+|+++|++..
T Consensus 27 ~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~ 106 (443)
T PRK08297 27 VLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG 106 (443)
T ss_pred ceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC
Confidence 455899999999996 99999999999999999999999999 99999998653 222 467889999999999987
Q ss_pred CCCCceEEEcCCHHHHHHHHHHHHHhhc------------CCCeEEEEcCCcccCchhhhhccCCCCcccc-ccCCCeEe
Q 013235 155 PGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWKFN-VVQTGVHH 221 (447)
Q Consensus 155 ~~~~~~v~~~~sGseA~e~Aik~ar~~t------------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~-~~~~g~~~ 221 (447)
|.+.++|+|+||||||||.|||+||.|+ +|.+||+++++|||++.+++++++...++.. .+..+..+
T Consensus 107 p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 186 (443)
T PRK08297 107 DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPR 186 (443)
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccc
Confidence 6667899999999999999999999883 2578999999999999999999875332211 12112222
Q ss_pred ecCCCCcCCCCC-C---Ch----HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 222 ALNPDPYRGVFG-A---DG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 222 ~~~p~~~~~~~~-~---d~----~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
++.|..+ .++. . +. ..+++++++++... ++++|+||+||+||++|+++||++||++|+++|++||+++|+
T Consensus 187 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~ 264 (443)
T PRK08297 187 IDNPKLR-FPLPGEDLEEVEALEAEALAQARAAFERH-PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIF 264 (443)
T ss_pred cCCCCCC-CCCcccccchhhHHHHHHHHHHHHHHHhC-CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3323221 1110 0 11 12356677778753 579999999999999999999999999999999999999999
Q ss_pred eccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhh----c-CCcccccCCCChHHHHHHHHHH
Q 013235 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVL----T-RRNYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 294 DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l----~-~~~~~~T~~~np~a~aaala~L 368 (447)
|||||||||+| ++|+++++|+.|||+||||++ |+|++++.+++.+.. . ...|++||++||++|++++++|
T Consensus 265 DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gK~l----~~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 339 (443)
T PRK08297 265 DEVQTGVGLTG-TAWAYQQLGVRPDIVAFGKKT----QVCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRIL 339 (443)
T ss_pred echhhccCccc-hHHHHHhcCCCCCEEEecccc----cccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHH
Confidence 99999999999 799999999999999999987 456777777655432 1 2247899999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee-eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++++++++.+++++++++|+++|+++.++++.+. +|||.|+|++++|.+ ......+++.|+++||++.+
T Consensus 340 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~--------~~~~~~~~~~l~~~Gvl~~~ 409 (443)
T PRK08297 340 EVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT--------TADRDEVIRRLWEEGVLVLP 409 (443)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC--------HHHHHHHHHHHHHCCEEEec
Confidence 9999999999999999999999999999998765 999999999999943 12456789999999999854
No 63
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=6.4e-66 Score=521.44 Aligned_cols=332 Identities=33% Similarity=0.529 Sum_probs=296.0
Q ss_pred EEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEc
Q 013235 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFT 164 (447)
Q Consensus 85 ~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~ 164 (447)
+++++|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+.+..+.++...+|+++|++..+ .++|+|+
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~ 78 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFC 78 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEe
Confidence 46899999999999999999999999999999999999999999998776665668889999999999874 5689999
Q ss_pred CCHHHHHHHHHHHHHhhcC-------------CCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcC
Q 013235 165 NSGTEANELAIMMARLYTG-------------CNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYR 229 (447)
Q Consensus 165 ~sGseA~e~Aik~ar~~t~-------------~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~ 229 (447)
||||||||.|+|+||.+++ +.+||+++++|||++.+++++++...++..+. .+++.+++++
T Consensus 79 ~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~---- 154 (382)
T PLN00144 79 NSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG---- 154 (382)
T ss_pred CCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC----
Confidence 9999999999999999975 47899999999999999999988655543322 1455555432
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc
Q 013235 230 GVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (447)
Q Consensus 230 ~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~ 309 (447)
| .+.+++++. ++++++||+||+||+||+.+++++|+++|+++|++||+++|+|||||||||+| .+|+
T Consensus 155 -----d----~~~l~~~~~---~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g-~~~~ 221 (382)
T PLN00144 155 -----N----LEAARKLIQ---KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG-YLWA 221 (382)
T ss_pred -----C----HHHHHHhcC---CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-hHhh
Confidence 3 567777764 35899999999999999999999999999999999999999999999999999 6888
Q ss_pred ccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 013235 310 FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKE 389 (447)
Q Consensus 310 ~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~ 389 (447)
++++++.|||+||||+|++|+|+|++++++++++.+....+.+||++||++|++++++|++|+++++.+++++++++|++
T Consensus 222 ~~~~~~~PDi~t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 301 (382)
T PLN00144 222 HEAYGVEPDIMTLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRE 301 (382)
T ss_pred hhhcCCCCCEEEecccccCCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999877678899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 390 RLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 390 ~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.|+++.++++.+.+|||.|+|++++|.. + ..++++.|+++||++.+
T Consensus 302 ~l~~~~~~~~~~~~vrg~G~~~~l~l~~------~----~~~~~~~~~~~Gv~i~~ 347 (382)
T PLN00144 302 LLRRKLGGNPHVKEVRGVGLLVGIQLDV------P----AGPLVDACRDSGLLVLT 347 (382)
T ss_pred HHHHHHhhCCCceeeecCceEEEEEecC------c----cHHHHHHHHHCCeEEee
Confidence 9999998998899999999999999921 1 35688999999999864
No 64
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=2.1e-65 Score=521.02 Aligned_cols=339 Identities=30% Similarity=0.533 Sum_probs=300.8
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
..|+++++|+|+|+||.|||+||||.+|+++.+|||+||+|.+|+.+|++++.+....+.++...+|+++|++..+ .+
T Consensus 16 ~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~ 93 (397)
T TIGR03246 16 PAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATF--AD 93 (397)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CC
Confidence 4589999999999999999999999999999999999999999999999987655555678889999999999884 46
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCCC
Q 013235 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGV 231 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~~ 231 (447)
+++|+|||+||||.|||+||.++ +|.+||+++++|||++.+++++++...++..+. ..++..++++
T Consensus 94 ~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 167 (397)
T TIGR03246 94 KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN------ 167 (397)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC------
Confidence 89999999999999999999985 788999999999999999999887654443222 2455555443
Q ss_pred CCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc
Q 013235 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (447)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~ 311 (447)
| .+++++++. +++++||+||+|+++|+++++++||++|+++|++||+++|+|||||||||+| .+|+++
T Consensus 168 ---d----~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G-~~~a~~ 235 (397)
T TIGR03246 168 ---D----LAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYM 235 (397)
T ss_pred ---C----HHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc-cchhhh
Confidence 3 567777774 3799999999999999999999999999999999999999999999999999 688889
Q ss_pred ccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 013235 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (447)
Q Consensus 312 ~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L 391 (447)
++|+.||++|+||+++||+|+|++++++++++.+....+.+||++||++|++++++|++++++++.+++++++++|+++|
T Consensus 236 ~~gv~pDi~t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L 315 (397)
T TIGR03246 236 HYGVTPDILTSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGL 315 (397)
T ss_pred hcCCCCCEEEeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987666889999999999999999999988899999999999999999
Q ss_pred HHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 392 TALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 392 ~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++..+++.+.++||.|+|+++++.++. ......+++.|+++||++.
T Consensus 316 ~~l~~~~~~~~~vrg~G~~~~i~~~~~~------~~~~~~~~~~l~~~Gv~~~ 362 (397)
T TIGR03246 316 EKINARYNVFSEIRGKGLLIGAVLTEAY------QGKAKQFVNAAAEEGVIAL 362 (397)
T ss_pred HHHHhcCCCeEeeecCceEEEEEEcCch------hhHHHHHHHHHHHCCeEEe
Confidence 9998888889999999999999996421 1245689999999999985
No 65
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.1e-65 Score=521.39 Aligned_cols=334 Identities=33% Similarity=0.582 Sum_probs=288.2
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
..|+++++++|+|+||.|||+||||++|+++.++||+||+|.+|+.+|++++.+.+..+.++...+|+++|.+.. +.+
T Consensus 17 ~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~--~~~ 94 (395)
T PRK03715 17 RPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHS--CFD 94 (395)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhcc--CCC
Confidence 457899999999999999999999999999999999999999999999999877665566888899999999864 357
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhc-----CCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCCC
Q 013235 160 VVFFTNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVF 232 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t-----~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~~ 232 (447)
+++|+|||+||||.|+|+||.++ ++++||+++++|||++.+++++++...|+....+ .++.+.++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-------- 166 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL-------- 166 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCC--------
Confidence 89999999999999999999874 6789999999999999999999876544432211 23333321
Q ss_pred CCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc
Q 013235 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA 312 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~ 312 (447)
+| ++++++.+. +++++||+||+|+++|++++|++||++|+++|++||+++|+|||||||||+| ++|++++
T Consensus 167 -~d----~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG-~~~a~~~ 236 (395)
T PRK03715 167 -ND----IASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG-TLFAYEL 236 (395)
T ss_pred -ch----HHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc-chhhHhh
Confidence 23 566777664 3789999999999999999999999999999999999999999999999999 7999999
Q ss_pred cCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 013235 313 HGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT 392 (447)
Q Consensus 313 ~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~ 392 (447)
+|+.|||+||||+|+||+|+|+++++++++. +....+++||++||++|++++++|++++++++.+++++++++|+++|+
T Consensus 237 ~gv~PDi~t~gK~lg~G~p~~av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~ 315 (395)
T PRK03715 237 SGIEPDIMTLGKGIGGGVPLAALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLL 315 (395)
T ss_pred cCCCCceeeehhhhhCCcceEEEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999874 334457899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC---Cceee
Q 013235 393 ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI---CALFF 444 (447)
Q Consensus 393 ~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~---Gvlv~ 444 (447)
++.++++ +.+|||.|+|++|++.++ ...++.+.++++ ||++.
T Consensus 316 ~l~~~~~-i~~vrG~Glm~~i~l~~~---------~~~~~~~~~~~~~~~Gi~~~ 360 (395)
T PRK03715 316 ELSEERG-LEGERGEGLLRALLLGKD---------IGPQIVEKARDMQPDGLLLN 360 (395)
T ss_pred HHhhcCC-cCeEEcceeEEEEEecCc---------hHHHHHHHHHhccCCCEEEe
Confidence 9988887 678999999999999642 123444555555 99985
No 66
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=1.3e-64 Score=519.13 Aligned_cols=366 Identities=25% Similarity=0.369 Sum_probs=294.6
Q ss_pred HHHHHHhhhcCCccccccCCCeEEEeecccEEEec-CCCeEEEecCCcccccCCCCCHHHH--HHHHHHHHhccc---cc
Q 013235 62 EILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDE-NGRRYLDAFGGIATVCCGHCHPYVV--DSIVNQIKRIQH---ST 135 (447)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~-dG~~ylD~~~g~~~~~lGh~~p~v~--~A~~~~l~~~~~---~~ 135 (447)
.+++...+|.... .|..++.+++++|+||||. |||+||||.+|++++++||+||+|+ +|+.+|++++.+ ..
T Consensus 3 ~~~~~~~~~~~~~---~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~ 79 (431)
T TIGR03251 3 RVHEVLSRHMLTD---GFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSN 79 (431)
T ss_pred hHHHHHHHHhhcc---CCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhccccc
Confidence 4555556664332 2323344699999999996 9999999999999999999999999 999999998743 22
Q ss_pred ccccchHHHHHHHHHHHhC-CCCCceEEEcCCHHHHHHHHHHHHHhhcC------------CCeEEEEcCCcccCchhhh
Q 013235 136 VLYLNHAIADFAEALASKM-PGNLKVVFFTNSGTEANELAIMMARLYTG------------CNDIISLRNAYHGNAAGTM 202 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~-~~~~~~v~~~~sGseA~e~Aik~ar~~t~------------~~~ii~~~~~yHG~~~~~~ 202 (447)
..+.++...+++++|++.. +.++++|+|+||||||||+|||+||.|++ |++||+|+++|||++.+++
T Consensus 80 ~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~al 159 (431)
T TIGR03251 80 SDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTL 159 (431)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhh
Confidence 2456888899999999986 55678999999999999999999999863 4789999999999999999
Q ss_pred hccCCCCccccc-cCCCeEeecCCCCcCCCCC----CCh----HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCC
Q 013235 203 GATAQSNWKFNV-VQTGVHHALNPDPYRGVFG----ADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (447)
Q Consensus 203 ~~t~~~~~~~~~-~~~g~~~~~~p~~~~~~~~----~d~----~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~ 273 (447)
++++...++... +..+..+++.|+. +.++. .+. ..+++++++.++.. ++++||||+||+||++|++++|
T Consensus 160 s~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~iAavivEPv~g~~G~~~~~ 237 (431)
T TIGR03251 160 SLTNTDPRKTARFPKFDWPRIDNPKL-TFPLDAPNLDQVIALEEEALRQARAAFAER-PHDIACFIAEPIQGEGGDNHFR 237 (431)
T ss_pred hccCCccccccCCCCCCCccCCCCcc-cCCccccccchhhHHHHHHHHHHHHHHHhC-CCcEEEEEEeccccCCCCcCCC
Confidence 998854333221 1112222333322 11111 111 13456677777643 5799999999999999999999
Q ss_pred CChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhh----c-CC
Q 013235 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVL----T-RR 348 (447)
Q Consensus 274 ~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l----~-~~ 348 (447)
++||++|+++|++||++||+|||||||||+| .+|+++++|+.|||+|+||++ |+++++..+++.+.. . ..
T Consensus 238 ~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG-~~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~ 312 (431)
T TIGR03251 238 PEFLRAMRALCDEHDALLIFDEVQTGVGLTG-TAWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPS 312 (431)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccCccc-hHHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCcc
Confidence 9999999999999999999999999999999 799999999999999999986 666677666543322 1 12
Q ss_pred cccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHH
Q 013235 349 NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKA 427 (447)
Q Consensus 349 ~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~ 427 (447)
.+.+||++||++|++++++|++++++++.+++++++++|+++|+++.++++ .+.++||.|+|+++++.+ ..
T Consensus 313 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~--------~~ 384 (431)
T TIGR03251 313 RLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS--------TA 384 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC--------HH
Confidence 477999999999999999999999999999999999999999999988898 899999999999999942 22
Q ss_pred HHHHHHHHHHhCCceeec
Q 013235 428 ETLYIMDKMKGICALFFS 445 (447)
Q Consensus 428 ~~~~~~~~l~~~Gvlv~~ 445 (447)
...++.+.|+++||++.+
T Consensus 385 ~~~~~~~~l~~~Gvl~~~ 402 (431)
T TIGR03251 385 DRDEVIRQLYREGVLLLG 402 (431)
T ss_pred HHHHHHHHHHhCCeEEec
Confidence 456789999999999853
No 67
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=1.1e-63 Score=509.95 Aligned_cols=339 Identities=31% Similarity=0.545 Sum_probs=299.2
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
..|+++++++|+||||.|||+||||.+|+++++|||+||+|++|+.+|++++.+....+.++...+|+++|++..+ .+
T Consensus 20 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 97 (406)
T PRK12381 20 PAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--AD 97 (406)
T ss_pred CCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CC
Confidence 4578999999999999999999999999999999999999999999999987665555678888999999999874 47
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCC
Q 013235 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGV 231 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~ 231 (447)
+|+|++||+||||.|+|+||.++ ++.+|++++++|||++.+++++++.+.++..+.. .++.+++.
T Consensus 98 ~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 170 (406)
T PRK12381 98 RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY------- 170 (406)
T ss_pred eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-------
Confidence 89999999999999999999985 7889999999999999999999886655433211 23333332
Q ss_pred CCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc
Q 013235 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (447)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~ 311 (447)
+| ++++++++. +++++||+||+|++||+++++++|+++|+++|++||+++|+||||+||||+| .+|+++
T Consensus 171 --~d----~~~l~~~l~----~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G-~~~~~~ 239 (406)
T PRK12381 171 --ND----LNSASALID----DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYM 239 (406)
T ss_pred --CC----HHHHHHhcc----CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc-chhhhH
Confidence 23 567777764 3799999999999999999999999999999999999999999999999999 688888
Q ss_pred ccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 013235 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (447)
Q Consensus 312 ~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L 391 (447)
++++.||++||||+++||+|+|++++++++++.+....+.+||++||+++++++++|++++++++.+++++++++|+++|
T Consensus 240 ~~~v~pDi~t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 319 (406)
T PRK12381 240 HYGVTPDVLTTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERL 319 (406)
T ss_pred hhCCCCCEEEehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987767889999999999999999999998899999999999999999
Q ss_pred HHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 392 TALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 392 ~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++..+++.+.++||.|+|+++++.++. ...+..+.+.|+++||++.
T Consensus 320 ~~l~~~~~~~~~vrg~Gl~~~~~l~~~~------~~~~~~~~~~l~~~Gv~v~ 366 (406)
T PRK12381 320 NTINARYGLFSEIRGLGLLIGCVLNAEY------AGKAKQISQEAAKAGVMVL 366 (406)
T ss_pred HHHHhhCCCEEEEecCeEEEEEEecCch------hhHHHHHHHHHHHCCcEEe
Confidence 9998888888999999999999996421 1235678899999999985
No 68
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=5.4e-63 Score=512.26 Aligned_cols=363 Identities=28% Similarity=0.459 Sum_probs=313.1
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 013235 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~ 138 (447)
.++++++..+++..+. +++.|+++++++|+||||.||++||||++|++++++||+||+|++|+++|++++.+.+..+
T Consensus 38 ~~~~~~~~~~~~~~~~---~~~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~ 114 (474)
T PLN02624 38 SSAHLIELEEKYSAHN---YHPIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAF 114 (474)
T ss_pred chHHHHHHHHHhhccc---cCCCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccccc
Confidence 3467788777775553 4466899999999999999999999999999999999999999999999999987766667
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc--------CCCeEEEEcCCcccCchhhhhccCCCCc
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--------GCNDIISLRNAYHGNAAGTMGATAQSNW 210 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t--------~~~~ii~~~~~yHG~~~~~~~~t~~~~~ 210 (447)
.++...+|+++|++.++ .++++|+|||+||||.|||+||.++ ++.+||.+.++|||++.+++++++...+
T Consensus 115 ~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~ 192 (474)
T PLN02624 115 YNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (474)
T ss_pred CCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccc
Confidence 78999999999999984 5789999999999999999999863 3457999999999999999999876544
Q ss_pred ccccc--CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC
Q 013235 211 KFNVV--QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (447)
Q Consensus 211 ~~~~~--~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g 288 (447)
+..+. .+++.++++ +| .+.++++++.. ++++++||+||+|+++|.+.++++||++|+++|++||
T Consensus 193 ~~~~~~~~~~~~~~~~---------~d----~~~l~~~l~~~-~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 193 TRGFGPLLPGHLKVDF---------GD----LDALEKIFEED-GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred cccCCCCCCCceEeCC---------CC----HHHHHHHHHhC-CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 43321 134444433 23 56778878643 4689999999999999999999999999999999999
Q ss_pred CEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHH
Q 013235 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAV 367 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~ 367 (447)
+++|+||||+||||+| ++|+++++++.||+++|||++++| +|+|++++++++++.+....+++||++||++++++.++
T Consensus 259 illI~DEv~tG~GrtG-~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aa 337 (474)
T PLN02624 259 VLMIADEIQTGLARTG-KMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAA 337 (474)
T ss_pred CEEEEeccccCcCcCc-chhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHH
Confidence 9999999999999999 688888899999999999999987 79999999999998887667889999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 368 L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
|+.++++++.+++.+++++|+++|.++.++++ .+.+++|.|+|++|++.++. +....+.++++.|+++||++.+
T Consensus 338 Le~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~----~~~~~a~~~~~~L~e~GV~v~p 412 (474)
T PLN02624 338 LQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPK----LGPVSAYDVCLKLKERGLLAKP 412 (474)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCC----cChHHHHHHHHHHHhCCeEEec
Confidence 99999889999999999999999999988887 57889999999999995331 1123456789999999999864
No 69
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=2.2e-63 Score=509.09 Aligned_cols=373 Identities=26% Similarity=0.370 Sum_probs=308.0
Q ss_pred CHHHHHHHHhhhcCCccccc-cC-CCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 013235 59 SADEILAKRKTFLSPSLFHL-YS-KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~-~~-~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 136 (447)
+.+++++...+++++..... .. .++.+++++|+|+||.|||+||||++|+++++|||+||+|++|+.+|++++.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~ 82 (427)
T TIGR00508 3 DTASLLAFDQRHIWHPYTSMSSPLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF 82 (427)
T ss_pred ChHHHHhccccccccCccCccccCCCceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 34456665555544322111 12 24678999999999999999999999999999999999999999999999865443
Q ss_pred -cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCC
Q 013235 137 -LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSN 209 (447)
Q Consensus 137 -~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~ 209 (447)
.+.++...+++++|++.+|.++++|+|++||+||||.|+|+||.++ +|.+||+|.++|||.+.+++++++...
T Consensus 83 ~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 162 (427)
T TIGR00508 83 GGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPEN 162 (427)
T ss_pred cccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcc
Confidence 3568889999999999998878899999999999999999999885 578999999999999999999887432
Q ss_pred -ccccc--cCCCeEeecCCCC-cCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccc-cCCCceeeCCCChHHHHHHHH
Q 013235 210 -WKFNV--VQTGVHHALNPDP-YRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSI 284 (447)
Q Consensus 210 -~~~~~--~~~g~~~~~~p~~-~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi-~~~gG~~~~~~~~l~~l~~l~ 284 (447)
++... ..+++..++.|.. +...|. ...+++++++++.. ++++|+||+||+ |+.||+++++++||++|+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~l~~~l~~~-~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc 238 (427)
T TIGR00508 163 SMHSLYKGYLPEQIFAPAPQNRFDEEWN---EEAITPLAKLMELH-SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALC 238 (427)
T ss_pred cccccccccCCCCeEcCCCCccccchhH---HHHHHHHHHHHHhc-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHH
Confidence 22111 1134455555532 111121 12356777777643 458999999997 999999999999999999999
Q ss_pred HHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcCC-----cccccCCCCh
Q 013235 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR-----NYFNTFGGNP 358 (447)
Q Consensus 285 ~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~~-----~~~~T~~~np 358 (447)
++||+++|+|||||||||+| ++|+++++++.|||+|+||+++||+ |++++++++++++.+... .+.+||++||
T Consensus 239 ~~~~~llI~DEv~tG~Gr~G-~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p 317 (427)
T TIGR00508 239 KQYDILLIADEIATGFGRTG-KLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNP 317 (427)
T ss_pred HHcCCEEEEeccccCCCcCC-ccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCH
Confidence 99999999999999999999 7899999999999999999999995 999999999999988642 2678999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh
Q 013235 359 VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG 438 (447)
Q Consensus 359 ~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~ 438 (447)
++|++++++|++++++++.+++++++++|+++|+++. +++.+.++||.|+|++|++.++. .+..+.+.|++
T Consensus 318 ~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~-~~~~i~~vrg~G~~~~i~~~~~~--------~~~~~~~~l~~ 388 (427)
T TIGR00508 318 LACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR-KNPVVKDVRVLGAIGVVEMYKPV--------NVEELQKKFVE 388 (427)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCEEeEeccccEEEEEECCcc--------CHHHHHHHHHH
Confidence 9999999999999999999999999999999999985 46678899999999999996431 13578899999
Q ss_pred CCceeec
Q 013235 439 ICALFFS 445 (447)
Q Consensus 439 ~Gvlv~~ 445 (447)
+||++..
T Consensus 389 ~Gv~~~~ 395 (427)
T TIGR00508 389 QGVWIRP 395 (427)
T ss_pred CCeEEEe
Confidence 9999863
No 70
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4.2e-62 Score=500.59 Aligned_cols=377 Identities=26% Similarity=0.400 Sum_probs=312.8
Q ss_pred CCHHHHHHHHhhhcCCcccc-------ccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHh
Q 013235 58 PSADEILAKRKTFLSPSLFH-------LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (447)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~ 130 (447)
+++++++++.++++.....+ +...|+.+++++|+|+||.||++||||.+|+++.++||+||+|++|+.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~ 81 (426)
T PRK00062 2 SKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK 81 (426)
T ss_pred chhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh
Confidence 56889999998888654321 12347899999999999999999999999999999999999999999999988
Q ss_pred cccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCc
Q 013235 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW 210 (447)
Q Consensus 131 ~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~ 210 (447)
.. ...+.++...+|+++|++.+|. .++|+|+|||+||||.|+|+||.++++++||+++++|||++.++.+.++....
T Consensus 82 ~~--~~~~~~~~~~~la~~L~~~~~~-~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~ 158 (426)
T PRK00062 82 GL--SFGAPTELEVELAELVIELVPS-IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAA 158 (426)
T ss_pred CC--cCCCCCHHHHHHHHHHHHhCCC-CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCcccc
Confidence 53 2345688889999999999874 67899999999999999999999999999999999999999888777543221
Q ss_pred cccccC-CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC
Q 013235 211 KFNVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (447)
Q Consensus 211 ~~~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ 289 (447)
.+..+. .++.....+..++.++ +| .+++++.++.. ++++++||+||+|+++|.++++++||++|+++|++||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~-~d----~~~l~~~i~~~-~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~ 232 (426)
T PRK00062 159 TLGLPDSPGVPEDFAKHTLTAPY-ND----LEAVEELFEEY-GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGA 232 (426)
T ss_pred ccCCCCCCCCCcccccceEEcCC-CC----HHHHHHHHHhC-CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 111111 1111000011222233 23 56777777643 45899999999999999999999999999999999999
Q ss_pred EEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcC---CcccccCCCChHHHHHHHH
Q 013235 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---RNYFNTFGGNPVCTAAGHA 366 (447)
Q Consensus 290 llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~---~~~~~T~~~np~a~aaala 366 (447)
++|+||||+|| |+| .+|+++++++.||++++||++++|+|+|++++++++++.+.. ..+++||++||++|+++++
T Consensus 233 llI~DEv~~G~-r~g-~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a 310 (426)
T PRK00062 233 LLIFDEVMTGF-RVA-LGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLA 310 (426)
T ss_pred EEEEeechhcc-ccC-CccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHH
Confidence 99999999999 888 577788899999999999999999999999999999998853 2356899999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCC-----CCCCHHHHHHHHHHHHhCCc
Q 013235 367 VLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKGICA 441 (447)
Q Consensus 367 ~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~-----~~p~~~~~~~~~~~l~~~Gv 441 (447)
+|++++++++.+++++++++++++|+++.++++.+.++||.|+|+++++.+++.. +.++...+.++.+.|+++||
T Consensus 311 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv 390 (426)
T PRK00062 311 TLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGV 390 (426)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCe
Confidence 9999998899999999999999999999999999999999999999999764321 23444556789999999999
Q ss_pred eeec
Q 013235 442 LFFS 445 (447)
Q Consensus 442 lv~~ 445 (447)
++.+
T Consensus 391 ~v~~ 394 (426)
T PRK00062 391 YLAP 394 (426)
T ss_pred Eeec
Confidence 9864
No 71
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=6.1e-62 Score=500.09 Aligned_cols=375 Identities=26% Similarity=0.396 Sum_probs=309.9
Q ss_pred HHHHHHHHhhhcCCcccc---cc----CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc
Q 013235 60 ADEILAKRKTFLSPSLFH---LY----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~---~~----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~ 132 (447)
|++++++.+++++..... +. +.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.
T Consensus 2 s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~ 81 (423)
T TIGR00713 2 SENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT 81 (423)
T ss_pred cHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC
Confidence 567888888887654311 11 45899999999999999999999999999999999999999999999999864
Q ss_pred cccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccc
Q 013235 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (447)
Q Consensus 133 ~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~ 212 (447)
+ ..++++...+|+++|++.+|. .++|+|++|||||+++|+|+||.++++++||+++++|||++..+++.++......
T Consensus 82 ~--~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 158 (423)
T TIGR00713 82 S--YGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATL 158 (423)
T ss_pred c--CCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCccccc
Confidence 3 234678889999999999875 3689999999999999999999999999999999999999988877654321111
Q ss_pred cccC-CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEE
Q 013235 213 NVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291 (447)
Q Consensus 213 ~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ll 291 (447)
..+. .++.....++.++.++ +| .+++++++... ++++++||+||+++++|.++++++|+++|+++|++||+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-~d----~~~l~~~i~~~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~ll 232 (423)
T TIGR00713 159 GLPTSPGVPEDFAKLTLVLPY-ND----LEALEEVFEEY-GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLL 232 (423)
T ss_pred CCCCCCCCCcccccceEEeCC-CC----HHHHHHHHHHc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEE
Confidence 1111 1111111222233333 23 57788887643 3589999999999999999888999999999999999999
Q ss_pred EEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCC---cccccCCCChHHHHHHHHHH
Q 013235 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR---NYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 292 I~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~---~~~~T~~~np~a~aaala~L 368 (447)
|+||||+|| |+| .+|+++++++.||++||||++++|+|+|++++++++++.+... .+.+||++||++|++++++|
T Consensus 233 I~DEv~~g~-r~g-~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l 310 (423)
T TIGR00713 233 IFDEVMTGF-RVA-LGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATL 310 (423)
T ss_pred EEEcccccc-ccC-cchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHH
Confidence 999999999 888 5777788999999999999999999999999999999988642 36789999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCC-----CCCCHHHHHHHHHHHHhCCcee
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~-----~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
+.++++++.++++++++++++.|.++.++++.+.++||.|+|+++++..++.+ +.++...+.++++.|+++||++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 390 (423)
T TIGR00713 311 KLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFL 390 (423)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEE
Confidence 99998889999999999999999999999999999999999999999754321 1233345667899999999998
Q ss_pred ec
Q 013235 444 FS 445 (447)
Q Consensus 444 ~~ 445 (447)
..
T Consensus 391 ~~ 392 (423)
T TIGR00713 391 PP 392 (423)
T ss_pred ec
Confidence 63
No 72
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=8.7e-61 Score=491.15 Aligned_cols=378 Identities=29% Similarity=0.491 Sum_probs=322.8
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc-cc
Q 013235 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL-YL 139 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-~~ 139 (447)
+++.++.+++..+.... ..|+++++++|+||||+||++||||.+|++++++||+||+|.+|+.+|++++.|.... +.
T Consensus 5 ~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~ 82 (425)
T PRK08088 5 KSLMQRRSAAVPRGVGQ--IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLA 82 (425)
T ss_pred HHHHHHHHHhhccccCC--CCCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccC
Confidence 45566665665444322 3489999999999999999999999999999999999999999999999998665432 34
Q ss_pred chHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Cccccc--c
Q 013235 140 NHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNV--V 215 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~--~ 215 (447)
++...+|+++|++..|.+. ++++|++||+||||.|+|+||.++++.+||+++++|||++.+++++++.. .+...+ .
T Consensus 83 ~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK08088 83 YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCC
Confidence 7788899999999887554 58999999999999999999999999999999999999999999988642 233222 1
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
..++.+++.|..+++ .+.+..+++++++++. ..++++++||+||+|+++|.+.++++|+++|+++|++||+++|+|
T Consensus 163 ~~~~~~~~~p~~~~~---~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~D 239 (425)
T PRK08088 163 PGHVYRALYPCPLHG---VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIAD 239 (425)
T ss_pred CCCcEEcCCCccccC---ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 245666666654432 2233446778888863 235689999999999999999999999999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhh
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~ 374 (447)
|||+||||+| .+++++++++.|||++|||++++|+|+|++++++++++.+....+.+||++||+.++++.++|+.++.+
T Consensus 240 ev~~g~g~~g-~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 240 EVQTGAGRTG-TLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred ccccCCCcCc-chhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999 688888899999999999999999999999999999999887778899999999999999999999888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 375 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++.+++++.++++++.|.++.++++.+..++|.|+|++++|.++..++.|......++.+.|+++||++.
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~ 388 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILL 388 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEe
Confidence 9999999999999999999999998889999999999999976655555666667889999999998874
No 73
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=2.2e-61 Score=491.71 Aligned_cols=351 Identities=27% Similarity=0.465 Sum_probs=302.7
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 013235 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (447)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~ 138 (447)
++++++++..++..+. +...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+.+..+
T Consensus 3 ~~~~~~~~~~~~~~~~---~~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~ 79 (396)
T PRK04073 3 KSEKIIELTNHYGAHN---YHPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAF 79 (396)
T ss_pred hHHHHHHHHHHhcccc---cCCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccccc
Confidence 4567777777775553 3356899999999999999999999999999999999999999999999999987765556
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh--------cCCCeEEEEcCCcccCchhhhhccCCCCc
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNW 210 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~--------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~ 210 (447)
.++...+|+++|++..+ .++++|+|||+|||++|||+||.+ ++|++||+++++|||++.+++++++.+.+
T Consensus 80 ~~~~~~~l~~~l~~~~~--~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~ 157 (396)
T PRK04073 80 HSDQLGPWYEKVAKLTG--KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEY 157 (396)
T ss_pred CCHHHHHHHHHHHhcCC--CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccc
Confidence 78888999999999875 468999999999999999999987 57889999999999999999999876544
Q ss_pred ccccc--CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC
Q 013235 211 KFNVV--QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (447)
Q Consensus 211 ~~~~~--~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g 288 (447)
+.... ..++.+++++ | .+++++.+. +++++||+||+++++|.+.++++||++|+++|++||
T Consensus 158 ~~~~~~~~~~~~~~~~~---------d----~~~l~~~i~----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 158 KRGFGPMLPGIKKIPYG---------D----LEALKAAIT----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred ccCCCCCCCCceEeCCC---------C----HHHHHHhcc----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 43221 1344444432 3 466776664 368999999999999999999999999999999999
Q ss_pred CEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHH
Q 013235 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAV 367 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~ 367 (447)
+++|+||||+||||+| .+|+++++++.||+++|||++|+| +|+|++++++++++.+....+.+||++||+++++++++
T Consensus 221 ~lli~DEv~~g~g~~g-~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aa 299 (396)
T PRK04073 221 VLFIADEIQTGLGRTG-KLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAA 299 (396)
T ss_pred CEEEEecchhCCCcCc-HHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999 678888899999999999999976 99999999999999887666789999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 368 L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
|+.++++++.+++++++++|.++|+++ .++.+.+++|.|+|+++++.. ...++.+.|+++||++.
T Consensus 300 L~~~~~~~l~~~~~~~~~~l~~~L~~l--~~~~i~~~~~~g~~~~~~~~~----------~~~~~~~~l~~~Gv~~~ 364 (396)
T PRK04073 300 LEVLEEEKLPERSLELGEYFKEQLKEI--DNPMIKEVRGRGLFIGVELNE----------PARPYCEALKEEGLLCK 364 (396)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhh--cCCcccceecceEEEEEEecc----------hHHHHHHHHHHCCeEEe
Confidence 999988899999999999999999987 445678899999999999842 13578899999999985
No 74
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=4.2e-60 Score=481.43 Aligned_cols=336 Identities=36% Similarity=0.549 Sum_probs=295.8
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
..|+.+++++|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.++...+++++|++..+ .+
T Consensus 12 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 89 (389)
T PRK01278 12 RADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--AD 89 (389)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CC
Confidence 4589999999999999999999999999999999999999999999999987666555678889999999999874 46
Q ss_pred eEEEcCCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCCC
Q 013235 160 VVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGV 231 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~~ 231 (447)
+|+|++||+|||+.|+|++|.+ ++|++||+++++|||++.+++++++...+..... ..++..++.+
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 163 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFG------ 163 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCC------
Confidence 8999999999999999999987 6678999999999999999999887654332211 1234333322
Q ss_pred CCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc
Q 013235 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (447)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~ 311 (447)
| .+++++.+. +++++||+||+|+++|.++++++|+++|+++|++||+++|+||||+||||+| .+++++
T Consensus 164 ---d----~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~~~~~~ 231 (389)
T PRK01278 164 ---D----IEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG-KLFAHE 231 (389)
T ss_pred ---C----HHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-cceeec
Confidence 3 567777774 2799999999999999889999999999999999999999999999999999 688888
Q ss_pred ccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 013235 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (447)
Q Consensus 312 ~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L 391 (447)
++++.||+++|||++++|+|+|++++++++++.+....+.+||++||+++++++++|+.++++++.+++++++++++++|
T Consensus 232 ~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l 311 (389)
T PRK01278 232 WAGVTPDIMAVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKL 311 (389)
T ss_pred ccCCCCCEEEEehhccCCcceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999887777889999999999999999999988889999999999999999
Q ss_pred HHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 392 TALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 392 ~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++.++++ ++.+++|.|+|+++++..+ ..+++++|+++||++.+
T Consensus 312 ~~l~~~~~~~~~~v~g~G~~~~i~~~~~----------~~~~~~~l~~~GV~~~p 356 (389)
T PRK01278 312 EGLVDRFPDVIEEVRGKGLLLGLKCVVP----------NRDLVQALRDEGLLTVG 356 (389)
T ss_pred HHHHhhCCCceeeEecccEEEEEEEecC----------HHHHHHHHHHCCeEEee
Confidence 99988887 7889999999999998432 45789999999999864
No 75
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=2.2e-59 Score=480.36 Aligned_cols=361 Identities=21% Similarity=0.277 Sum_probs=287.5
Q ss_pred HHHHHHHhhhcCCccccc---c-----CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc
Q 013235 61 DEILAKRKTFLSPSLFHL---Y-----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~---~-----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~ 132 (447)
.++.++..++++....++ + ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.
T Consensus 2 ~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~ 81 (431)
T PRK06209 2 QLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC 81 (431)
T ss_pred HHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc
Confidence 356677777776543221 1 24789999999999999999999999999999999999999999999999875
Q ss_pred cccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEE-cCCcccCchhhhhccCCCCcc
Q 013235 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL-RNAYHGNAAGTMGATAQSNWK 211 (447)
Q Consensus 133 ~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~-~~~yHG~~~~~~~~t~~~~~~ 211 (447)
+ ....+....+|+++|++.+|. .++|+|+||||||||.|+|+||.+|||.+|+.+ .++|||...+....+....
T Consensus 82 ~--~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~-- 156 (431)
T PRK06209 82 N--FTRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSA-- 156 (431)
T ss_pred C--CCCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCC--
Confidence 3 223455566899999999875 578999999999999999999999999999999 7888875433322211000
Q ss_pred ccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEE
Q 013235 212 FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291 (447)
Q Consensus 212 ~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ll 291 (447)
..+. .... .....++ +| +++++++++.. ++++|+||+||++|+ .++++||++|+++|++||+++
T Consensus 157 -~~~~-~~~~----~~~~~~~-~d----~~~l~~~l~~~-~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lL 220 (431)
T PRK06209 157 -GIPA-SVSA----LTVTFRY-ND----IASLEALFEDH-PGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALF 220 (431)
T ss_pred -CCCh-hHhc----cccccCC-CC----HHHHHHHHHhC-CCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEE
Confidence 0000 0000 0111122 34 57788877643 468999999999987 678999999999999999999
Q ss_pred EEeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHh--hc----CC--cccccCCCChHHHHH
Q 013235 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV--LT----RR--NYFNTFGGNPVCTAA 363 (447)
Q Consensus 292 I~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~--l~----~~--~~~~T~~~np~a~aa 363 (447)
|+|||||||++++ ++..+++|+.|||+|+||++|||+|+|++++++++++. +. .. .|.+||++||++|++
T Consensus 221 I~DEv~tG~~~~~--~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aa 298 (431)
T PRK06209 221 ILDEMITGFRWHM--RGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAA 298 (431)
T ss_pred EEEcccccCCcCc--chhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHH
Confidence 9999999998754 22334689999999999999999999999999999987 31 11 267899999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 364 ala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
++++|++|+++++.+++++++++|+++|+++.++++.+.+|||.|++++++++.......+.......+.++|+++||++
T Consensus 299 a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 378 (431)
T PRK06209 299 AIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLM 378 (431)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccc
Confidence 99999999999999999999999999999999889999999999999999997543333344444557889999999986
Q ss_pred e
Q 013235 444 F 444 (447)
Q Consensus 444 ~ 444 (447)
.
T Consensus 379 p 379 (431)
T PRK06209 379 P 379 (431)
T ss_pred c
Confidence 3
No 76
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=6.4e-58 Score=466.79 Aligned_cols=353 Identities=34% Similarity=0.556 Sum_probs=300.9
Q ss_pred HHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc
Q 013235 60 ADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL 139 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~ 139 (447)
+++.++...+++.+. +...|+++.+++|+|+||.|||+||||.+|+++++|||+||+|.+|+.++++++.+....|.
T Consensus 7 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~ 83 (398)
T PRK03244 7 TAELLQRWQAVMMNN---YGTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFA 83 (398)
T ss_pred HHHHHHHHHHHhhhh---ccCCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccC
Confidence 345555555555443 22458999999999999999999999999999999999999999999999998776555678
Q ss_pred chHHHHHHHHHHHhCCCC-CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC--
Q 013235 140 NHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ-- 216 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~-- 216 (447)
++...+|+++|++.++.. .++++|++||+||++.|+++++. +++++||.++++|||++.+++++++...+...+..
T Consensus 84 ~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 162 (398)
T PRK03244 84 TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLP 162 (398)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCC
Confidence 888899999999998643 46899999999999999999987 67889999999999999999988764433222211
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
..+..++. +| .+++++.+. +++++||+||+|+++|.+.++++|+++|+++|++||+++|+|||
T Consensus 163 ~~~~~~~~---------~d----~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv 225 (398)
T PRK03244 163 GGVEHVPY---------GD----VDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEV 225 (398)
T ss_pred CCceEeCC---------CC----HHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 22333332 23 566777663 37899999999999999999999999999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhH
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKL 376 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l 376 (447)
|+||||+| ++|+++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|++++++++
T Consensus 226 ~~g~gr~g-~~~~~~~~~~~pDi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 304 (398)
T PRK03244 226 QTGIGRTG-AWFAHQHDGVTPDVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGL 304 (398)
T ss_pred ccCCcccc-hHHhhhhhCCCCCEEEEchhhhCCcccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 99999999 67788889999999999999999999999999999999887666789999999999999999999988899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 377 QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 377 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+++++++++|++.|+++ .++.+.+++|.|+|+++++..+ .+.++.++|+++||++.+
T Consensus 305 ~~~~~~~~~~l~~~L~~~--~~~~~~~v~g~g~~~~i~~~~~---------~~~~~~~~l~~~Gv~~~~ 362 (398)
T PRK03244 305 LENAERLGEQLRAGIEAL--GHPLVDHVRGRGLLLGIVLTAP---------VAKAVEAAAREAGFLVNA 362 (398)
T ss_pred HHHHHHHHHHHHHHHHhc--CCCceeeEeeccEEEEEEEecc---------HHHHHHHHHHHCCeEEee
Confidence 999999999999999887 4677889999999999999421 256789999999999864
No 77
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=7.8e-58 Score=466.69 Aligned_cols=340 Identities=31% Similarity=0.537 Sum_probs=293.8
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
..|+++.+++|+||||.||++||||.+|+++.+|||+||+|.+|+.+|++++.+....+.++...+|+++|++..+ .+
T Consensus 21 ~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~ 98 (403)
T PRK05093 21 PAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AE 98 (403)
T ss_pred CCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CC
Confidence 5689999999999999999999999999999999999999999999999986554444567778899999999873 46
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhc------CCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCC
Q 013235 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGV 231 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t------~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~ 231 (447)
+++|++||+|||++|+|+||.++ ++++||+++++|||++.+++++++...+...... .++.+++.
T Consensus 99 ~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 171 (403)
T PRK05093 99 RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF------- 171 (403)
T ss_pred EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------
Confidence 89999999999999999999985 6889999999999999999888765433322211 23344332
Q ss_pred CCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc
Q 013235 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (447)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~ 311 (447)
+| .+++++.+. +++++||+||+++++|+++++++|+++|+++|++||+++|+||||+||||+| ++++++
T Consensus 172 --~d----~~~l~~~l~----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~~~~~~ 240 (403)
T PRK05093 172 --ND----LAAVKAVID----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG-DLFAYM 240 (403)
T ss_pred --CC----HHHHHHHhc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-cchhhh
Confidence 23 566777664 3689999999999999999999999999999999999999999999999999 677778
Q ss_pred ccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 013235 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (447)
Q Consensus 312 ~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L 391 (447)
++++.||+++|||++++|+|+|++++++++++.+....+.+||++||+++++++++|+.++++++.+++++++++|+++|
T Consensus 241 ~~~~~pdi~s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L 320 (403)
T PRK05093 241 HYGVTPDILTSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGL 320 (403)
T ss_pred hcCCCCCEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999987666778999999999999999999988889999999999999999
Q ss_pred HHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 392 TALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 392 ~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++..+++.+.+++|.|+++++++..+. .....++++.|+++||++.+
T Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~l~~~~------~~~~~~~~~~l~~~Gv~v~~ 368 (403)
T PRK05093 321 QKINQKYGVFSEIRGMGLLIGAELKPQY------KGRARDFLNAAAEEGVMVLV 368 (403)
T ss_pred HHHHhhCCCeEeEeeCceEEEEEecCcc------hhHHHHHHHHHHHCCeEEec
Confidence 9987777888899999999999985321 12356789999999999864
No 78
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=2.1e-57 Score=463.28 Aligned_cols=358 Identities=27% Similarity=0.457 Sum_probs=302.3
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc
Q 013235 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN 140 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~ 140 (447)
++++++..+|.... +.+.|+.+++++|+||||.||++||||.++++++++||+||+|.+|+.++++++.+.+..+.+
T Consensus 2 ~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~ 78 (401)
T TIGR01885 2 EEAIERENKYGAHN---YHPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYN 78 (401)
T ss_pred hhHHHHHHHhhhcc---cCCCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCC
Confidence 35666666664332 335578899999999999999999999999999999999999999999999988766555568
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh--------cCCCeEEEEcCCcccCchhhhhccCCCCccc
Q 013235 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~--------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~ 212 (447)
+...+|+++|++.++ .++++|++||+|||+.|||+||.+ ++++.|++++++|||++.+++++++...+..
T Consensus 79 ~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 79 DVFGEFAEYVTKLFG--YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred HHHHHHHHHHHhhcC--CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 889999999999984 578999999999999999999987 3578899999999999999999887544332
Q ss_pred cccC--CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCE
Q 013235 213 NVVQ--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290 (447)
Q Consensus 213 ~~~~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~l 290 (447)
.+.. .++..++. +| .++++++++.. ++++++||+||+++++|.+.++++||++|+++|++||++
T Consensus 157 ~~~~~~~~~~~~~~---------~d----~~~le~~l~~~-~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~l 222 (401)
T TIGR01885 157 NFGPYVPGFKKIPY---------NN----LEALEEALEDH-GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVL 222 (401)
T ss_pred ccCCCCCCceEeCC---------CC----HHHHHHHHHhc-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 2211 23333332 23 57788887654 358999999999999999999999999999999999999
Q ss_pred EEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 291 CIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 291 lI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
+|+||||+||||+| .+|+++++++.||++|+||++++| +|+|++++++++++.+....+.+||++||+++++++++|+
T Consensus 223 li~DEv~~g~g~~G-~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 223 LIADEIQTGLGRTG-KLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALE 301 (401)
T ss_pred EEEechhhCCCccc-hhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999 688888889999999999999987 8999999999999988765577899999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.++++++.+++++++++|+++|+++ .++++.+++|.|+|+++++.++.. ...+.++.+.|+++||++.+
T Consensus 302 ~i~~~~l~~~~~~~~~~~~~~L~~l--~~~~~~~~~g~g~~~~i~~~~~~~-----~~~~~~l~~~l~~~Gv~v~~ 370 (401)
T TIGR01885 302 VLEEEKLAENAEKLGEIFRDQLKKL--PKPIITEVRGRGLLNAIVIDESKT-----GRTAWDLCLKLKEKGLLAKP 370 (401)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHhc--cCCceeEEeecCeeEEEEeccCcc-----hhHHHHHHHHHHhCCEEEEe
Confidence 9988889999999999999999988 356778999999999999854311 12357899999999999853
No 79
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.5e-57 Score=458.11 Aligned_cols=336 Identities=36% Similarity=0.611 Sum_probs=291.9
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
+.|+.+++++|+|+||+|||+||||.+|+++++|||+||+|++|+.+|++++.+.+..+.++...+|+++|.+..+ .+
T Consensus 10 ~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 87 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSA--GD 87 (377)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCC--CC
Confidence 4578999999999999999999999999999999999999999999999987665555567888899999988764 36
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCCCCCChH
Q 013235 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADGE 237 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~~ 237 (447)
.++|++||+|||++|++++|.++++++||+++++|||++.+++++++...++....+ .++..++. +|
T Consensus 88 ~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~d-- 156 (377)
T PRK02936 88 LVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF---------ND-- 156 (377)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCC---------CC--
Confidence 899999999999999999999999999999999999999999988765433222211 23333322 23
Q ss_pred HHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCC
Q 013235 238 MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVP 317 (447)
Q Consensus 238 ~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~p 317 (447)
.+++++.+. +++++||+||+++++|.++++++|+++|+++|++||+++|+||||+||||+| ++++++++++.|
T Consensus 157 --~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g-~~~~~~~~~~~~ 229 (377)
T PRK02936 157 --IKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG-TLFAYEQFGLDP 229 (377)
T ss_pred --HHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-hhhHHHhhCCCC
Confidence 566777664 3689999999999999999999999999999999999999999999999999 677778889999
Q ss_pred CEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 013235 318 DIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDK 397 (447)
Q Consensus 318 Divt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~ 397 (447)
|++||||++++|+|+|++++++++++.+....+.+||++||+++++++++|+.++++++.++++++++++++.|+++..+
T Consensus 230 di~t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 309 (377)
T PRK02936 230 DIVTVAKGLGNGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEH 309 (377)
T ss_pred cEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999987666778999999999999999999977789999999999999999997777
Q ss_pred cCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 398 YGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 398 ~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+..+++.|+|+++++.++ ..++.+.|+++||++.+
T Consensus 310 ~~~~~~v~~~g~~~~i~~~~~----------~~~~~~~l~~~gv~v~~ 347 (377)
T PRK02936 310 LECVKNIRGKGLMIGIECTEE----------VAPVIEQLREEGLLVLS 347 (377)
T ss_pred CCcEEeEeecceEEEEEecch----------HHHHHHHHHHCCeEEec
Confidence 888889999999999998532 45688899999998864
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.9e-55 Score=449.06 Aligned_cols=353 Identities=28% Similarity=0.467 Sum_probs=297.7
Q ss_pred HHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc
Q 013235 60 ADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL 139 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~ 139 (447)
+.++++....+.... +++.|+.+.+++|+|+||.||++||||.+|++++++||+||+|.+|+.+|++++.+.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~ 81 (401)
T PRK00854 5 SEDLIATEQRLGAHN---YKPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFR 81 (401)
T ss_pred CHHHHHHHhhhhhcc---cCCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccC
Confidence 356665544433222 34568899999999999999999999999999999999999999999999999877665566
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh--------cCCCeEEEEcCCcccCchhhhhccCCCCcc
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNWK 211 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~--------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~ 211 (447)
++...+|+++|++..+. ++++|+|||+|||++||+++|.+ +++++||++.++|||++..+++++..+.++
T Consensus 82 ~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 82 NDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred CHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 88899999999998853 58999999999999999999987 356899999999999999888877654433
Q ss_pred cccc--CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC
Q 013235 212 FNVV--QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (447)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ 289 (447)
..+. ..++.+++.+ | .+++++.+. +++++||+||++|++|.+.++++||++|+++|++||+
T Consensus 160 ~~~~~~~~~~~~~~~~---------d----~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi 222 (401)
T PRK00854 160 GGFGPFTPGFRVVPFG---------D----AEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNV 222 (401)
T ss_pred ccCCCCCCCeEEeCCC---------C----HHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 2222 1345555432 3 567777764 2689999999999999999999999999999999999
Q ss_pred EEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC-ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHH
Q 013235 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 290 llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L 368 (447)
++|+||||+|||++| .+|+.+++++.||++++||++++| +|+|++++++++++.+....+..||++||+++++++++|
T Consensus 223 ~lI~DEv~~g~g~~g-~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L 301 (401)
T PRK00854 223 TLILDEIQTGLGRTG-KLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAAL 301 (401)
T ss_pred EEEEechhhCCCCCc-hHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999 677777889999999999999998 699999999999998876667789999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+.++++++.++++++++++++.|+++. +..+.+++|.|+|+.+++..+. ....++++.|+++||++.
T Consensus 302 ~~l~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~g~~~~i~~~~~~-------~~~~~~~~~L~~~GV~v~ 368 (401)
T PRK00854 302 KVLTEEGMIENAAEMGAYFLEGLRSIR--SNIVREVRGRGLMLAVELEPEA-------GGARQYCEALKERGLLAK 368 (401)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHhhc--cCceEEEeccceEEEEEEecCc-------hhHHHHHHHHHHCCeEEe
Confidence 999888899999999999999999873 3456778999999999986431 134679999999999985
No 81
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=8.6e-55 Score=443.99 Aligned_cols=342 Identities=28% Similarity=0.476 Sum_probs=290.3
Q ss_pred cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCC
Q 013235 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL 158 (447)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~ 158 (447)
...|+++++++|+|+||.||++||||++|++++++||+||+|.+|+.+|++.+.+.+..+.++...+++++|++.. +.
T Consensus 11 ~~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~ 88 (400)
T PTZ00125 11 HPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF--GY 88 (400)
T ss_pred CCCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC--CC
Confidence 3558899999999999999999999999999999999999999999999998877665555677778888887765 35
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhh--------cCCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCc
Q 013235 159 KVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPY 228 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~--------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~ 228 (447)
++++|++||+||||.||+++|.+ +++++||+++++|||.+.++++.++...+..... ..++..++.
T Consensus 89 ~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 164 (400)
T PTZ00125 89 DKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY---- 164 (400)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC----
Confidence 78999999999999999999865 2467899999999999999998876433221111 123333322
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcc
Q 013235 229 RGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308 (447)
Q Consensus 229 ~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~ 308 (447)
+| .+++++.+. .+++++|++||+++++|.+.++++|+++|+++|++||+++|+||||+||||+| .++
T Consensus 165 -----~d----~~~le~~l~---~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G-~~~ 231 (400)
T PTZ00125 165 -----ND----VEALEKLLQ---DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG-KLL 231 (400)
T ss_pred -----CC----HHHHHHHhC---CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hhh
Confidence 23 577888775 24799999999999999999999999999999999999999999999999999 677
Q ss_pred cccccCCCCCEEEeeccccCCc-cccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 013235 309 GFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYL 387 (447)
Q Consensus 309 ~~~~~gv~pDivt~sK~lg~G~-pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l 387 (447)
..+.+++.||++++||++++|+ |+|++++++++++.+....+..||++||++++++.++|+.++++++.++++++++++
T Consensus 232 ~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l 311 (400)
T PTZ00125 232 AHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVF 311 (400)
T ss_pred HHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 7788899999999999999885 999999999999988766677899999999999999999998888999999999999
Q ss_pred HHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 388 KERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 388 ~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++|+++...++.+..+++.|+|+++++..+. ......+++.|+++||++.+
T Consensus 312 ~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~------~~~~~~~~~~l~~~Gv~v~~ 363 (400)
T PTZ00125 312 RDGLKELLKKSPWVKEIRGKGLLNAIVFDHSD------GVNAWDLCLKLKENGLLAKP 363 (400)
T ss_pred HHHHHHHHhcCCCeEEEecccEEEEEEEccCc------chHHHHHHHHHHHCCeEEee
Confidence 99999987777888889999999999985321 12356789999999999864
No 82
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-54 Score=439.11 Aligned_cols=334 Identities=33% Similarity=0.539 Sum_probs=283.6
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
+.|+++++++|+||||.||++||||.+|++++++|| ||+|.+|+.+|++++.+....+.++...+++++|... ...
T Consensus 10 ~~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~---~~~ 85 (375)
T PRK04260 10 RAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD---KDY 85 (375)
T ss_pred CCCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC---cCC
Confidence 457899999999999999999999999999999999 9999999999998875544344566666777666542 223
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCCCCCChH
Q 013235 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADGE 237 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~~ 237 (447)
.++|++||+|||+.|++++|.++++.+||+++++|||++..++++++...+...+.. ..+...+ + +|
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~d-- 154 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI--------F-ND-- 154 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC--------C-CC--
Confidence 679999999999999999999999999999999999999999988765433222111 1111111 1 23
Q ss_pred HHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCC
Q 013235 238 MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVP 317 (447)
Q Consensus 238 ~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~p 317 (447)
++++++.+. +++++|++||+++++|.++++++||++++++|+++|+++|+||+|+|||++| .+|.++.+++.|
T Consensus 155 --l~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g-~~~~~~~~~~~p 227 (375)
T PRK04260 155 --LNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG-KLYAFEHYGIEP 227 (375)
T ss_pred --HHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-chhhhHhhCCCC
Confidence 566776653 3689999999999999999999999999999999999999999999999999 577778889999
Q ss_pred CEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 013235 318 DIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDK 397 (447)
Q Consensus 318 Divt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~ 397 (447)
||+||||++++|+|+|++++++++++.+....+.+||++||++++++.++|+.++++++++++++.+++++++|.++..+
T Consensus 228 di~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 307 (375)
T PRK04260 228 DIFTLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQD 307 (375)
T ss_pred CEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999887666889999999999999999999988899999999999999999999888
Q ss_pred cCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 398 YGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 398 ~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+..++|.|+|+++++..+ ..++.++|+++||++.+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~~~Gi~v~~ 345 (375)
T PRK04260 308 KETVTTVRGLGYMIGIETTAD----------LSQLVEAARDKGLIVLT 345 (375)
T ss_pred CCCeeEEeccceEEEEEecCc----------HHHHHHHHHhCCCEEec
Confidence 887889999999999999321 35789999999999853
No 83
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2e-54 Score=440.62 Aligned_cols=353 Identities=36% Similarity=0.588 Sum_probs=302.0
Q ss_pred HHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc
Q 013235 60 ADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL 139 (447)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~ 139 (447)
+.++++..+.++... +.+.|+++++++|+|+||.|||+||||.+|++++++||+||+|.+|+.+++++..+....|+
T Consensus 3 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~ 79 (396)
T PRK02627 3 SEAIIELEKKYLMNT---YGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYY 79 (396)
T ss_pred HHHHHHHHHHhhccc---ccCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccC
Confidence 456666666665443 33568999999999999999999999999999999999999999999999998766555678
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCC-----CeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC-----NDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~-----~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
++...+|+++|++.. +.++++|++||+||+++|+++++.++++ .+|++++++|||.+..++++++...++...
T Consensus 80 ~~~~~~la~~l~~~~--~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 157 (396)
T PRK02627 80 IEPQEELAEKLVELS--GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF 157 (396)
T ss_pred CHHHHHHHHHHHhhc--CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC
Confidence 889999999999986 4589999999999999999999998876 789999999999999999887654332211
Q ss_pred cC--CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEE
Q 013235 215 VQ--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 215 ~~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
.. .++..++. +| .+++++.+. +++++||+||+++++|..+++++++++|+++|++||+++|
T Consensus 158 ~~~~~~~~~~~~---------~d----~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI 220 (396)
T PRK02627 158 EPLVEGFIYVPF---------ND----IEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLI 220 (396)
T ss_pred CCCCCCceEeCC---------CC----HHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 11 23333322 23 566777663 3789999999999999888899999999999999999999
Q ss_pred EeccccCccccCCCcccccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh
Q 013235 293 ADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ 372 (447)
Q Consensus 293 ~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~ 372 (447)
+||+|+||||+| .+++++.+++.||+++|||++++|+|+|++++++++++.+....+.+||++||++++++.++|+.++
T Consensus 221 ~DE~~~g~g~~g-~~~~~~~~~~~pdi~t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 299 (396)
T PRK02627 221 LDEVQTGMGRTG-KLFAYQHYGIEPDIMTLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIE 299 (396)
T ss_pred EechhcCCCccC-ceeeehhcCCCCCEEEEcchhhCCcccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999 6778888899999999999999999999999999999988766678999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 373 KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 373 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++++.+++++++++++++|.++..+++.+..++|.|+|+++++.. ...++++.|+++||++.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv~v~~ 362 (396)
T PRK02627 300 EEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR----------PAAEIVKKALEKGLLINV 362 (396)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC----------cHHHHHHHHHHCCeEEee
Confidence 888999999999999999999988887788899999999999821 146789999999999864
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=2e-53 Score=435.34 Aligned_cols=362 Identities=41% Similarity=0.650 Sum_probs=302.5
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc-ccchHHHHHHHHHHHhCCCCC
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL-YLNHAIADFAEALASKMPGNL 158 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-~~~~~~~elae~L~~~~~~~~ 158 (447)
..|+++++++|+|+||.||++||||.+|++.+++||+||+|.+|+.+++++..+.... +.++...+++++|++.++.+.
T Consensus 17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGL 96 (413)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCC
Confidence 4689999999999999999999999999999999999999999999999876543322 247788999999999997667
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc--CCCeEeecCCCCcCCCCCCCh
Q 013235 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGVFGADG 236 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~--~~g~~~~~~p~~~~~~~~~d~ 236 (447)
++++|++||+||++.|+++++.++++++|++++++|||++..++++++...+..... ...+..++.+...+.. .+.
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 174 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPP--AEL 174 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccch--hhH
Confidence 899999999999999999999999999999999999999999998876543322211 1234444443221100 111
Q ss_pred HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCC
Q 013235 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVV 316 (447)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~ 316 (447)
...+++|++.+... ++++++||+||+++++|.+.++++|+++|+++|++||+++|+||||+||||+| ..+.++++++.
T Consensus 175 ~~d~~~l~~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g-~~~~~~~~~~~ 252 (413)
T cd00610 175 ADDLEALEEALEEH-PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG-KMFAFEHFGVE 252 (413)
T ss_pred HHHHHHHHHHHhcC-CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-chhhHhhcCCC
Confidence 11256777777643 45899999999999999999999999999999999999999999999999999 57777888999
Q ss_pred CCEEEeeccccCCccccccccCHHHHHhh--cCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 013235 317 PDIVTMAKGIGNGIPLGAVVTTPEIAEVL--TRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 317 pDivt~sK~lg~G~pigav~~~~~i~~~l--~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 394 (447)
||++++||++++|+|+|++++++++++.+ ....+.+||++||++++++.++|+.++++++.+++++++++++++|+++
T Consensus 253 ~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 253 PDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLREL 332 (413)
T ss_pred CCeEEEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986 3345678999999999999999999988889999999999999999998
Q ss_pred HHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 395 KDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 395 ~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
...++.+..+++.|.++++++.++..+..++......+.+.|+++||++.+
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~ 383 (413)
T cd00610 333 AEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRP 383 (413)
T ss_pred HhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEee
Confidence 877777888999999999999765333334344567899999999999875
No 85
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-53 Score=401.38 Aligned_cols=386 Identities=25% Similarity=0.345 Sum_probs=310.5
Q ss_pred cccCCCCCCCCCCCCCCCCCCCHHHHHHHHhhhcCCccccccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCC
Q 013235 38 HETFLPRMPPFDYSPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCH 117 (447)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~ 117 (447)
.....|.-|... .+.+|+|+++++.++..++......+|+ +..++.-|.||+|+|||.+||.++.+.++++||+|
T Consensus 20 ~~n~ep~gP~ik--TesIPGPks~~l~kel~~v~~t~~v~F~---~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~ 94 (484)
T KOG1405|consen 20 DVNFEPDGPSIK--TESIPGPKSQELKKELDKVQDTEAVHFF---VDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNN 94 (484)
T ss_pred ccccCCCCCccc--cccCCCchhHHHHHHHhHhhcccceEEe---hhhhhhcCceEEecCCCeeehhhhhhcccccCCCC
Confidence 344456666443 3468999999999998888766544443 56678899999999999999999999999999999
Q ss_pred HHHHHHHHH-HHHh-ccc--ccccccch-HHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc----------
Q 013235 118 PYVVDSIVN-QIKR-IQH--STVLYLNH-AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---------- 182 (447)
Q Consensus 118 p~v~~A~~~-~l~~-~~~--~~~~~~~~-~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t---------- 182 (447)
|.+++++++ |+.+ +.. ....|+.. ....+.+.|.+..|.+.+.|++.-+||.|||.|+|.|..+-
T Consensus 95 P~LvK~a~~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~ 174 (484)
T KOG1405|consen 95 PALVKAAQQPQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGF 174 (484)
T ss_pred HHHHHHhcChHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCC
Confidence 999998864 3222 211 12234433 33345555667789899999999999999999999986541
Q ss_pred ----------------CCCeEEEEcCCcccCchhhhhccCCC-CccccccCCCeEeecCCCCcCCCCCC-------ChHH
Q 013235 183 ----------------GCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVVQTGVHHALNPDPYRGVFGA-------DGEM 238 (447)
Q Consensus 183 ----------------~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~~~g~~~~~~p~~~~~~~~~-------d~~~ 238 (447)
+.--|++|.++|||++.++++.|... ..+.+.|...|++.++|. |+.|... ..+.
T Consensus 175 s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~-ykYPLdenv~~N~ked~~ 253 (484)
T KOG1405|consen 175 SAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPR-YKYPLDENVAENKKEDQG 253 (484)
T ss_pred CHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCCCCCCcc-ccCChhhhhhhhhhhhhh
Confidence 12349999999999999999998754 456777778888888775 4444432 2356
Q ss_pred HHHHHHHHHHccC--CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCC-
Q 013235 239 YAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV- 315 (447)
Q Consensus 239 ~~~~le~~i~~~~--~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv- 315 (447)
|++++|++|.+.. ...+|++|+||||++||....+++|++.|+++|+|||+.+|+||||||-|-|| ++|++|+|++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG-k~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG-KFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC-ceeeehhcCCC
Confidence 8999999997643 24799999999999999999999999999999999999999999999999999 8999999998
Q ss_pred -CCCEEEeecccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 013235 316 -VPDIVTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTA 393 (447)
Q Consensus 316 -~pDivt~sK~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~ 393 (447)
-||+|||||-+- ||+ ...+++.-. ....+++||.|+|.-.....+++++|++++|.+++..+|+.|..+|.+
T Consensus 333 ~PpD~vTFSKK~q~gGf-----fh~~~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~ 406 (484)
T KOG1405|consen 333 SPPDVVTFSKKFQTGGF-----FHDEEFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLE 406 (484)
T ss_pred CCccceehhhhhhcCcc-----ccCcccCCC-chHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999986 554 223332210 112478999999999999999999999999999999999999999999
Q ss_pred HHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 394 LKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 394 l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
|+++|+ .+..+||+|.|+++++ |......+++..++-+||-++
T Consensus 407 Lq~~~p~~~~~~RGrGTF~a~d~--------ps~~~Rdk~i~~~~~nGv~~G 450 (484)
T KOG1405|consen 407 LQAKYPGKINNLRGRGTFIAWDC--------PSGSIRDKLILIARLNGVNLG 450 (484)
T ss_pred HHHhCchhhhcccccceEEEEeC--------CChHHHHHHHHHHHHcCceec
Confidence 999996 5778999999999998 444567889999999999875
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=2e-46 Score=379.59 Aligned_cols=335 Identities=39% Similarity=0.647 Sum_probs=282.1
Q ss_pred CCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc
Q 013235 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~ 159 (447)
+.|+++++++|+++||.||++||||.+|++++++||+||.|.+++.+++++..++...|+++...+|+++|++.++ .+
T Consensus 8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~ 85 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSG--AD 85 (379)
T ss_pred CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC--CC
Confidence 5689999999999999999999999999999999999999999999999987665566788899999999999985 46
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhcC-----CCeEEEEcCCcccCchhhhhccCCCCccccccC--CCeEeecCCCCcCCCC
Q 013235 160 VVFFTNSGTEANELAIMMARLYTG-----CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVF 232 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t~-----~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~--~g~~~~~~p~~~~~~~ 232 (447)
+++++|||+||++.|+++++.+++ +++|++++++|||....+...++...+...... ..+...+ +
T Consensus 86 ~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 157 (379)
T TIGR00707 86 RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAP--------Y 157 (379)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeC--------C
Confidence 899999999999999999987765 689999999999999998877664432211100 1122221 1
Q ss_pred CCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc
Q 013235 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA 312 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~ 312 (447)
+| .+++++.+.. ++++|++||+++++|..+++.+++++|.++|+++|+++|+||+|+|||++| .++.++.
T Consensus 158 -~d----~~~l~~~~~~----~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g-~~~~~~~ 227 (379)
T TIGR00707 158 -ND----IESLKKAIDD----ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG-KFFAYEH 227 (379)
T ss_pred -CC----HHHHHHHhhh----CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hhhhHHh
Confidence 23 5667776642 578999999999999888899999999999999999999999999999988 5556667
Q ss_pred cCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 013235 313 HGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT 392 (447)
Q Consensus 313 ~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~ 392 (447)
.++.||+++|||++++|+|+|++++++++++.+....+..+|++||++++++.++|+.++++++.+++++++++++++|+
T Consensus 228 ~~~~~d~~t~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~ 307 (379)
T TIGR00707 228 YGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLE 307 (379)
T ss_pred cCCCCCEEEEcccccCCcccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999998876556788999999999999999998877899999999999999999
Q ss_pred HHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 393 ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 393 ~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++....+. ..+++.|+++++++.++ ..++.+.|+++||++.+
T Consensus 308 ~~~~~~~~-~~~~~~g~~~~~~~~~~----------~~~~~~~l~~~Gv~v~~ 349 (379)
T TIGR00707 308 ELGKNYPN-KEVRGKGLMLGIELEAP----------CKDIVKKALEKGLLVNC 349 (379)
T ss_pred HHHhhCCC-CccccCceEEEEEecCc----------HHHHHHHHHHCCcEEee
Confidence 87555543 45777899999987432 35788899999999874
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-36 Score=307.18 Aligned_cols=314 Identities=15% Similarity=0.192 Sum_probs=226.8
Q ss_pred CCeEEEeecccEEEecCCCeEEEecCCcccccCC-CCCHHHHHHHHHHHHhcc---cccc--cccchHHHHHHHHHHHhC
Q 013235 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCG-HCHPYVVDSIVNQIKRIQ---HSTV--LYLNHAIADFAEALASKM 154 (447)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~l~~~~---~~~~--~~~~~~~~elae~L~~~~ 154 (447)
.++.+++|+|+++||.||++||||.++ ..+| |+||+|++|+.+|+++++ +... .+.++...+++++|++.+
T Consensus 28 ~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~ 104 (402)
T PRK07505 28 NGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF 104 (402)
T ss_pred ccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh
Confidence 467899999999999999999999883 4788 999999999999999853 2222 244678899999999998
Q ss_pred CCCCceEEEcCCHHHHHHHHHHHHHh--hc-CCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCC
Q 013235 155 PGNLKVVFFTNSGTEANELAIMMARL--YT-GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGV 231 (447)
Q Consensus 155 ~~~~~~v~~~~sGseA~e~Aik~ar~--~t-~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~ 231 (447)
+. .+++++||++|++.++++++. ++ ++.++|+++++|||....... +... ..++..++.
T Consensus 105 ~~---~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~------~~~~--~~~v~~~~~------- 166 (402)
T PRK07505 105 GA---SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKG------ICAD--ETEVETIDH------- 166 (402)
T ss_pred CC---CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhh------hhhc--CCeEEEeCC-------
Confidence 64 567888999999999998764 24 567799999999984321111 1100 123444443
Q ss_pred CCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc--cCccccCCCccc
Q 013235 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ--AGFARTGSHFWG 309 (447)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~--tGfgr~G~~~~~ 309 (447)
+| .+++++++.. +..+++|+||++++|+..+ +++|+++|++||++||+||+| ++||++| .++.
T Consensus 167 --~d----~~~l~~~~~~---~~~~~vl~~p~~~~G~~~~-----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g-~~~~ 231 (402)
T PRK07505 167 --ND----LDALEDICKT---NKTVAYVADGVYSMGGIAP-----VKELLRLQEKYGLFLYIDDAHGLSIYGKNG-EGYV 231 (402)
T ss_pred --CC----HHHHHHHHhc---CCCEEEEEecccccCCcCC-----HHHHHHHHHHcCCEEEEECcccccCcCCCC-CchH
Confidence 23 5677777653 3578999999998865543 899999999999999999998 6789999 5667
Q ss_pred ccccCC-CCCEE----EeeccccCCccccccc-cCHHHHHhhcCCcccccCCCC--hHHHHHHHHHHHHHhhhhHHHHHH
Q 013235 310 FEAHGV-VPDIV----TMAKGIGNGIPLGAVV-TTPEIAEVLTRRNYFNTFGGN--PVCTAAGHAVLKVIQKDKLQNNAH 381 (447)
Q Consensus 310 ~~~~gv-~pDiv----t~sK~lg~G~pigav~-~~~~i~~~l~~~~~~~T~~~n--p~a~aaala~L~~i~~~~l~~~~~ 381 (447)
.+++++ .||.+ ++||+++++ -|+++ .++++++.+....+..||++| ++++++++++|+++.++.+.+.
T Consensus 232 ~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~-- 307 (402)
T PRK07505 232 RSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQL-- 307 (402)
T ss_pred HHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHH--
Confidence 788887 78855 799999853 25555 478898888765667788776 5899999999997766655443
Q ss_pred HHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 382 VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 382 ~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+++++.++.+... ....++|.++++......+ ...+.++.+.|+++||++++
T Consensus 308 --~~~l~~~~~~~~~~--~~~~~~g~~~~i~~~~~~~-------~~~~~~~~~~l~~~Gi~v~~ 360 (402)
T PRK07505 308 --QQKLQNNIALFDSL--IPTEQSGSFLPIRLIYIGD-------EDTAIKAAKQLLDRGFYTSP 360 (402)
T ss_pred --HHHHHHHHHHHHHH--HHhcCCCCCCCEEEEEeCC-------HHHHHHHHHHHHHCCCeEee
Confidence 23444444332211 1123577777764322211 12356799999999999864
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=3.5e-33 Score=289.91 Aligned_cols=324 Identities=13% Similarity=0.078 Sum_probs=237.9
Q ss_pred eEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccc-----ccccchHHHHHHHHHHHhCCCC
Q 013235 83 LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST-----VLYLNHAIADFAEALASKMPGN 157 (447)
Q Consensus 83 ~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~-----~~~~~~~~~elae~L~~~~~~~ 157 (447)
+++.+++|++++ .+|++||||.++.+.... +||+|++|+.++++++++.+ ...+++.+.+|+++|+++++.
T Consensus 94 ~~~~~~~G~~i~-~~G~~~id~~s~~~lgl~--~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~- 169 (481)
T PLN02822 94 PVLESAAGPHTI-INGKDVVNFASANYLGLI--GNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT- 169 (481)
T ss_pred CceecCCCCeEE-ECCceEEEeECCCcCCCC--CCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-
Confidence 477889999999 899999999988664322 58999999999999965422 124578899999999999975
Q ss_pred CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChH
Q 013235 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGE 237 (447)
Q Consensus 158 ~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~ 237 (447)
.+.++|+++++ ++.++++ .++++.++|+++..||+....++.+++.. +..++. +|.+
T Consensus 170 ~~~i~~s~G~~-a~~sai~---a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~----------~~~~~~---------nd~~ 226 (481)
T PLN02822 170 PDSILYSYGLS-TIFSVIP---AFCKKGDIIVADEGVHWGIQNGLYLSRST----------IVYFKH---------NDME 226 (481)
T ss_pred CCEEEECCHHH-HHHHHHH---HhCCCCCEEEEeCCccHHHHHHHHHcCCe----------EEEECC---------CCHH
Confidence 36677775555 7888777 45678888889999998887777665422 222221 3433
Q ss_pred HHHHHHHHHHHccC-CCCe-EEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc--CccccCCCccccccc
Q 013235 238 MYAKDVQDLIDFGT-SGHV-AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA--GFARTGSHFWGFEAH 313 (447)
Q Consensus 238 ~~~~~le~~i~~~~-~~~~-aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--Gfgr~G~~~~~~~~~ 313 (447)
.+...++++-.... .+++ ++||+|++++++|.+.+ |++|+++|++||++||+||+|+ .+|++| +. ..+++
T Consensus 227 ~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G-~G-~~e~~ 300 (481)
T PLN02822 227 SLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSG-RG-LSEHF 300 (481)
T ss_pred HHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCC-CC-hHHHc
Confidence 32222332211110 1233 89999999999999987 9999999999999999999998 457777 33 45888
Q ss_pred CC---CCCEEE--eecccc-CCccccccccCHHHHHhhcCCcccccCCCC--hHHHHHHHHHHHHHhh-hhHHHHHHHHH
Q 013235 314 GV---VPDIVT--MAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGN--PVCTAAGHAVLKVIQK-DKLQNNAHVVG 384 (447)
Q Consensus 314 gv---~pDivt--~sK~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~n--p~a~aaala~L~~i~~-~~l~~~~~~~g 384 (447)
++ .|||++ |||++| .| |++++++++++.+....+..||+++ |..+++++++|+.+++ +++.+++++++
T Consensus 301 ~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~ 377 (481)
T PLN02822 301 GVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENI 377 (481)
T ss_pred CCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 88 789987 889998 13 5688999999988766677899887 8899999999998876 67889999999
Q ss_pred HHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 385 SYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 385 ~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
++|+++|+++. .+. ....+.+.++.+.+.+.......+.....+++++|+ ++||++.+
T Consensus 378 ~~l~~~L~~~~-g~~--~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~ 436 (481)
T PLN02822 378 ALLHKGLSDIP-GLS--IGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVV 436 (481)
T ss_pred HHHHHHHHhcC-Ccc--cCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEe
Confidence 99999998752 121 122345777778874321111112234568999998 88999874
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=5.4e-31 Score=269.27 Aligned_cols=297 Identities=16% Similarity=0.141 Sum_probs=223.0
Q ss_pred CCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhccccc---c--cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHST---V--LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~--~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA 170 (447)
+|+++|+|+++.+ ||. +||+|++|+.++++++++.. . .+.++...+|+++|+++++. +.++|++||++|
T Consensus 43 ~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~A 117 (406)
T PRK13393 43 GPREVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVS 117 (406)
T ss_pred CCccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHH
Confidence 4689999998754 666 69999999999999986532 1 13356788999999999964 678899999999
Q ss_pred HHHHHH-HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 171 NELAIM-MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 171 ~e~Aik-~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
|+.|++ +++.+ +.++|+++..||+.+..++..++.. +..++. +| .+++++++..
T Consensus 118 n~~ai~~l~~~~--~g~~I~~~~~~H~s~~~~~~~~g~~----------~~~~~~---------~d----~~~l~~~l~~ 172 (406)
T PRK13393 118 NWAALSTLGSRL--PGCVILSDELNHASMIEGIRHSRAE----------KRIFRH---------ND----PADLERKLSD 172 (406)
T ss_pred HHHHHHHhhcCC--CCCEEEEccchhHHHHHHHHHcCCe----------EEEeCC---------CC----HHHHHHHHHh
Confidence 999999 55543 3468889999999988776654321 112221 23 4566666654
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-Cc-cccCCCcccccccCCC--CCEE--Eee
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GF-ARTGSHFWGFEAHGVV--PDIV--TMA 323 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-Gf-gr~G~~~~~~~~~gv~--pDiv--t~s 323 (447)
..++++++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |++| ..+ .++.++. +||+ +||
T Consensus 173 ~~~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g~-~~~~~~~~~~~i~~~tls 246 (406)
T PRK13393 173 LDPHRPKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GGI-AEREGLADRLTIIEGTLA 246 (406)
T ss_pred ccCCCCEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCC-Cch-hhhcCCCCCCeEEEEeCc
Confidence 33346789999999999999987 9999999999999999999997 76 8888 444 3666665 6787 899
Q ss_pred ccccC-CccccccccCHHHHHhhcCCc--ccccCCCChHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcC
Q 013235 324 KGIGN-GIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKDK-LQNNAHVVGSYLKERLTALKDKYG 399 (447)
Q Consensus 324 K~lg~-G~pigav~~~~~i~~~l~~~~--~~~T~~~np~a~aaala~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~ 399 (447)
|++|. | |++++++++++.+.... +..|++++|.+++++.++|+.+++.. ..++.++++++|++.|+++ .++
T Consensus 247 Ka~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 321 (406)
T PRK13393 247 KAFGVMG---GYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA--GIP 321 (406)
T ss_pred hhhcccC---ceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCC
Confidence 99983 3 67888999988876533 23577889999999999999886543 3355678888999988775 333
Q ss_pred CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh-CCceeec
Q 013235 400 IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG-ICALFFS 445 (447)
Q Consensus 400 ~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~-~Gvlv~~ 445 (447)
.+++.|.|+.+.+.+ ...+.++.+.|++ +||++..
T Consensus 322 ---~~~~~~~i~~v~~~~--------~~~~~~l~~~L~~~~Gi~v~~ 357 (406)
T PRK13393 322 ---HLPNPSHIVPVMVGD--------PVLCKQISDELLDRYGIYVQP 357 (406)
T ss_pred ---cCCCCCCeEEEEeCC--------HHHHHHHHHHHHHhCCEEEEe
Confidence 347889998886521 1235678899988 5999863
No 90
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=1.9e-29 Score=257.55 Aligned_cols=300 Identities=17% Similarity=0.166 Sum_probs=220.2
Q ss_pred cCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHH
Q 013235 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA 170 (447)
.+|+++++|+++.+ ..|+ +||+|++|+.++++++++.+. .+.++...+|+++|+++++. +.+++++||++|
T Consensus 42 ~~~~~~~~~~sn~y-lgl~-~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~--~~~l~~~sG~~a 117 (402)
T TIGR01821 42 DGAKDVTVWCSNDY-LGMG-QHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK--ESALVFTSGYVA 117 (402)
T ss_pred CCCeeEEEeEccCc-CCCC-CCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC--CeEEEECchHHH
Confidence 35699999998765 3556 699999999999999765321 13467789999999999963 567889999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
|+.+++++... .+.++|+.+..||+.....+..++.. +...+. +| .++++++++..
T Consensus 118 n~~ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~~g~~----------~~~~~~---------~d----~~~l~~~l~~~ 173 (402)
T TIGR01821 118 NDATLATLAKI-IPGCVIFSDELNHASMIEGIRHSGAE----------KFIFRH---------ND----VAHLEKLLQSV 173 (402)
T ss_pred HHHHHHHhhCC-CCCCEEEEcchHhHHHHHHHHHcCCe----------EEEECC---------CC----HHHHHHHHHhc
Confidence 99999987643 23567778888998887666544321 111111 23 46677777654
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-C-ccccCCCcccccccCC--CCCEE--Eeec
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-G-FARTGSHFWGFEAHGV--VPDIV--TMAK 324 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-fgr~G~~~~~~~~~gv--~pDiv--t~sK 324 (447)
.++++++|++|++++++|.+.+ +++|+++|++||+++|+||+|+ | +|..| .. ..+++++ .|||+ ||||
T Consensus 174 ~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g-~g-~~~~~~~~~~~div~~t~sK 247 (402)
T TIGR01821 174 DPNRPKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRG-GG-IAERDGLMHRIDIIEGTLAK 247 (402)
T ss_pred cCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCC-Cc-cchhccCCCCCeEEEEechh
Confidence 3346789999999999999987 9999999999999999999998 4 35555 22 2355665 47888 8999
Q ss_pred cccC-CccccccccCHHHHHhhcCC--cccccCCCChHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcCC
Q 013235 325 GIGN-GIPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGI 400 (447)
Q Consensus 325 ~lg~-G~pigav~~~~~i~~~l~~~--~~~~T~~~np~a~aaala~L~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~ 400 (447)
++|. | |++++++++++.+... .+..|.+.||.++++++++|+.+++. .+.++.+++++++++.|+++ .++.
T Consensus 248 a~g~~G---G~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 322 (402)
T TIGR01821 248 AFGVVG---GYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL--GIPV 322 (402)
T ss_pred hhccCC---ceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc--CCCc
Confidence 9983 3 6688999999888642 23456778999999999999998765 35566778888998888775 3332
Q ss_pred eeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh-CCceeec
Q 013235 401 IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG-ICALFFS 445 (447)
Q Consensus 401 i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~-~Gvlv~~ 445 (447)
+...|.++.+.+.+ ...+.++.+.|++ +||++.+
T Consensus 323 ---~~~~~~i~~i~~~~--------~~~a~~~~~~L~~~~Gi~v~~ 357 (402)
T TIGR01821 323 ---IPNPSHIVPVIIGD--------AALCKKVSDLLLNKHGIYVQP 357 (402)
T ss_pred ---CCCCCCEEEEEeCC--------HHHHHHHHHHHHhcCCEEEEe
Confidence 23467788776521 1235678888875 5999864
No 91
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=3.8e-29 Score=255.80 Aligned_cols=297 Identities=17% Similarity=0.192 Sum_probs=217.9
Q ss_pred CCeEEEecCCcccccCCCC-CHHHHHHHHHHHHhccccc----cc-ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHC-HPYVVDSIVNQIKRIQHST----VL-YLNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~-~p~v~~A~~~~l~~~~~~~----~~-~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~ 171 (447)
|+++|||+++.+ ||+. ||+|++|+.++++++++.. .. ++++...+|+++|+++++. +..++++||++||
T Consensus 45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~--~~~~~~~sG~~an 119 (407)
T PRK09064 45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK--EAALVFTSGYVSN 119 (407)
T ss_pred CceEEEEECCCC---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC--CcEEEECcHHHHH
Confidence 689999987654 5666 9999999999999875532 12 3577889999999998863 5567889999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
+.++++++... ++.+|+.+.-+|+.....+...+.. +...+. +| .++++++++...
T Consensus 120 ~~ai~~l~~~~-~~~~i~~~~~~h~s~~~~~~~~~~~----------~~~~~~---------~d----~~~le~~l~~~~ 175 (407)
T PRK09064 120 DATLSTLAKLI-PDCVIFSDELNHASMIEGIRRSRCE----------KHIFRH---------ND----VAHLEELLAAAD 175 (407)
T ss_pred HHHHHHHhCCC-CCCEEEEeCcchHHHHHHHHHcCCc----------EEEECC---------CC----HHHHHHHHHhcc
Confidence 99999876442 3566666666677665544433211 111111 23 567777776543
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-C-ccccCCCcccccccCC--CCCEE--Eeecc
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-G-FARTGSHFWGFEAHGV--VPDIV--TMAKG 325 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-fgr~G~~~~~~~~~gv--~pDiv--t~sK~ 325 (447)
++++++|++|++++++|.+.+ +++|+++|++||++||+||+|+ | ||++| ..+ .++.++ .|||+ ||||+
T Consensus 176 ~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g-~g~-~~~~~~~~~~div~~t~sKa 249 (407)
T PRK09064 176 PDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRG-GGI-AERDGLMDRIDIIEGTLAKA 249 (407)
T ss_pred CCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCC-CCh-HHhcCCCCCCeEEEEecchh
Confidence 346789999999999999887 9999999999999999999997 6 58888 343 456665 57888 89999
Q ss_pred ccC-CccccccccCHHHHHhhcCC--cccccCCCChHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 326 IGN-GIPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLKVIQKDK-LQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 326 lg~-G~pigav~~~~~i~~~l~~~--~~~~T~~~np~a~aaala~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
+|. | |++++++++++.+... .+..|.+.+|.++++++++|+.+++.+ ..+++++++++|++.|+++ .++.+
T Consensus 250 ~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 324 (407)
T PRK09064 250 FGVMG---GYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA--GIPVM 324 (407)
T ss_pred hhccC---ceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCCC
Confidence 973 3 6788899998877542 233467889999999999999987654 4578889999999999875 33332
Q ss_pred eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh-CCceeec
Q 013235 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG-ICALFFS 445 (447)
Q Consensus 402 ~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~-~Gvlv~~ 445 (447)
...+.++.+.+.+ ...+.++.+.|++ +||++..
T Consensus 325 ---~~~~~iv~i~~~~--------~~~~~~l~~~L~~~~gi~v~~ 358 (407)
T PRK09064 325 ---PNESHIVPVMVGD--------PEKCKKASDMLLEEHGIYVQP 358 (407)
T ss_pred ---CCCCCEEEEEeCC--------HHHHHHHHHHHHHhCCEEEee
Confidence 2446777776621 1235678888875 5999863
No 92
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.97 E-value=5.2e-29 Score=253.03 Aligned_cols=305 Identities=13% Similarity=0.102 Sum_probs=211.9
Q ss_pred EEecCCcccccCCCCCHHHHHHHHHHHHhccccc---c-cc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 102 LDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST---V-LY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 102 lD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~---~-~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
|||.++.+ ..|. +||++++++.+++++++..+ . .| ....+.+|+++|++++.. +..++++||+.|+..++.
T Consensus 1 ~~f~s~dy-Lgl~-~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~--e~al~~~sG~~a~~~~i~ 76 (392)
T PLN03227 1 LNFATHDF-LSTS-SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT--ESAILYSDGASTTSSTVA 76 (392)
T ss_pred CCCcCcCc-cCCC-CCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEecCcHHHHHHHHH
Confidence 45655443 2344 68999999999998753211 1 12 255788999999999964 456788999999998876
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc------
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG------ 250 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~------ 250 (447)
.. ...++.|++-+..| +.....+.+... .+..+.. +|. ++++++++..
T Consensus 77 ~l--~~~GD~Vl~~~~~h-~s~~~~~~l~~~----------~~~~~~~---------~d~----~~l~~~~~~i~~~~~a 130 (392)
T PLN03227 77 AF--AKRGDLLVVDRGVN-EALLVGVSLSRA----------NVRWFRH---------NDM----KDLRRVLEQVRAQDVA 130 (392)
T ss_pred Hh--CCCCCEEEEecccc-HHHHHHHHHcCC----------eEEEeCC---------CCH----HHHHHHHHHhhhhccc
Confidence 53 33556666666655 444333322211 1111211 232 2233322211
Q ss_pred ----CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc--CccccCCCcccccccCCCC----CEE
Q 013235 251 ----TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA--GFARTGSHFWGFEAHGVVP----DIV 320 (447)
Q Consensus 251 ----~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--Gfgr~G~~~~~~~~~gv~p----Div 320 (447)
...+...|++||+++++|.+++ +++|+++|++||+++|+||+++ .+|++| . |..+++|+.| ||+
T Consensus 131 ~~~~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G-~-g~~~~~g~~p~~~~Div 204 (392)
T PLN03227 131 LKRKPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSG-R-GSLEHAGLKPMVHAEIV 204 (392)
T ss_pred cccccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCC-C-cHHHHcCCCCCCCceEE
Confidence 1125679999999999999987 9999999999999999999997 345555 3 5679999999 999
Q ss_pred EeeccccCCccccccccCHHHHHhhcCCcccccCCCC--hHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 013235 321 TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGN--PVCTAAGHAVLKV-IQKDKLQNNAHVVGSYLKERLTALKDK 397 (447)
Q Consensus 321 t~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~n--p~a~aaala~L~~-i~~~~l~~~~~~~g~~l~~~L~~l~~~ 397 (447)
++|++-+.|.+.|++++++++++.+....+..||+++ |+.+++++++++. ++++++.+++++++++|+++|++ .+
T Consensus 205 ~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~--~~ 282 (392)
T PLN03227 205 TFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN--SS 282 (392)
T ss_pred EeechhhhhccCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh--cC
Confidence 8774433344556678899998877655567889887 8888888877755 56678999999999999999987 36
Q ss_pred cCCeeeEeec--------ceeEEEEEeeCCCCCCCC-HHHHHHHHHHHHhCCceee
Q 013235 398 YGIIGDVRGR--------GFLLGVEFVTDRQLKTPA-KAETLYIMDKMKGICALFF 444 (447)
Q Consensus 398 ~~~i~~vrg~--------Gl~~giel~~~~~~~~p~-~~~~~~~~~~l~~~Gvlv~ 444 (447)
++.+.++||. |+|++|++.+++.+..+. .....++.+.|+++||++.
T Consensus 283 ~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ 338 (392)
T PLN03227 283 HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVV 338 (392)
T ss_pred CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEE
Confidence 7788889884 558999995533222111 1134689999999999985
No 93
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=1.2e-27 Score=242.29 Aligned_cols=316 Identities=18% Similarity=0.214 Sum_probs=223.8
Q ss_pred ccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHH
Q 013235 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALA 151 (447)
Q Consensus 78 ~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~ 151 (447)
.|+.-.++.+++|+|||+ +|++||||.++. ++|| +||+|++++.++++.+.+... .+..+...+++++++
T Consensus 19 ~~~~~~~~~~~~g~~~~~-~g~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la 94 (385)
T PRK05958 19 LYRSLRPREGGAGRWLVV-DGRRMLNFASND---YLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELA 94 (385)
T ss_pred CCccccccccCCCceeEe-CCceEEEeeCCC---cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHH
Confidence 345556789999999997 999999999874 4787 789999999999987542211 234667889999999
Q ss_pred HhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCC
Q 013235 152 SKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGV 231 (447)
Q Consensus 152 ~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~ 231 (447)
+++. .+.++++++|++++..+++.. .++.+.|++...+|+....+..+.+. .+..++.
T Consensus 95 ~~~~--~~~~i~~~~g~~~~~~~l~~~---~~~gd~V~~~~~~~~~~~~~~~~~g~----------~~~~~~~------- 152 (385)
T PRK05958 95 EWFG--AERALLFSSGYAANLAVLTAL---AGKGDLIVSDKLNHASLIDGARLSRA----------RVRRYPH------- 152 (385)
T ss_pred HHhC--CCcEEEECcHHHHHHHHHHHh---CCCCCEEEEeCccCHHHHHHHHhcCC----------ceEEeCC-------
Confidence 9985 345677889999999887643 34444444556677766655444321 1122221
Q ss_pred CCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-C-ccccCCCccc
Q 013235 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-G-FARTGSHFWG 309 (447)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-fgr~G~~~~~ 309 (447)
.| .+++++.++.. +++.++++++++++.+|.+.+ +++|.++|++||+++|+||+|+ | ++++|..+..
T Consensus 153 --~d----~~~l~~~i~~~-~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~ 221 (385)
T PRK05958 153 --ND----VDALEALLAKW-RAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAA 221 (385)
T ss_pred --CC----HHHHHHHHHhc-cCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHH
Confidence 13 46777777542 224788999999998887665 9999999999999999999995 3 3445521111
Q ss_pred ccccCCCCC---EEEeeccccCCccccccccCHHHHHhhcCC--cccccCCCChHHHHHHHHHHHHHhhh-hHHHHHHHH
Q 013235 310 FEAHGVVPD---IVTMAKGIGNGIPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVV 383 (447)
Q Consensus 310 ~~~~gv~pD---ivt~sK~lg~G~pigav~~~~~i~~~l~~~--~~~~T~~~np~a~aaala~L~~i~~~-~l~~~~~~~ 383 (447)
.......+| +.+++|+++. +.|++++++++++.+... .+..+.+.+|++++++.++|+.+++. ++.+++.++
T Consensus 222 ~~~~~~~~~~i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~ 299 (385)
T PRK05958 222 EAGLAGEPDVILVGTLGKALGS--SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAAL 299 (385)
T ss_pred hhCCCCCCceEEEEechhhccc--CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 112233567 4579999974 238888999988876432 34455678899999999999988764 678889999
Q ss_pred HHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 384 GSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 384 g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++++.+.|+++ ... -+++.|.|+.+.+.+ .....++.+.|+++||++.+
T Consensus 300 ~~~l~~~L~~~--~~~---~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gI~v~~ 348 (385)
T PRK05958 300 IARLRAGLRAL--GFQ---LMDSQSAIQPLIVGD--------NERALALAAALQEQGFWVGA 348 (385)
T ss_pred HHHHHHHHHHc--CCC---cCCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCceEec
Confidence 99999998875 222 234678888887621 12356799999999999963
No 94
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=1e-27 Score=245.25 Aligned_cols=301 Identities=17% Similarity=0.188 Sum_probs=215.0
Q ss_pred ccCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccc--chHHHHHHHHHHH
Q 013235 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYL--NHAIADFAEALAS 152 (447)
Q Consensus 78 ~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~---~~~~~~~--~~~~~elae~L~~ 152 (447)
+.+.|++..++.|.+++|.+||.||||. +||+|++|+.+++++++ +.+..+. .+...+|+++|++
T Consensus 41 ~~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~ 110 (407)
T PRK07179 41 WNGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAA 110 (407)
T ss_pred cCCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHH
Confidence 4467899999999999999999999986 78999999999998762 2233333 3577899999999
Q ss_pred hCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCC
Q 013235 153 KMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (447)
Q Consensus 153 ~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (447)
.++. +.++|++||++||+.+++.... .++.|++ +.-.|.......... ++...+++.
T Consensus 111 ~~g~--~~~~~~~sG~~An~~~l~~l~~--~g~~v~~-~~~~h~s~~~~~~~~------------g~~~~~~~~------ 167 (407)
T PRK07179 111 FTGF--ESCLLCQSGWAANVGLLQTIAD--PNTPVYI-DFFAHMSLWEGVRAA------------GAQAHPFRH------ 167 (407)
T ss_pred HhCC--CcEEEECCHHHHHHHHHHHhCC--CCCEEEE-ECCcCHHHHHHHHHC------------CCeEEEecC------
Confidence 9854 5678899999999999986543 3344544 444443332222111 222222211
Q ss_pred CCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC--ccccCCCcccc
Q 013235 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGF 310 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--fgr~G~~~~~~ 310 (447)
+| .+++++.+.. .++++|++|++++++|.+.+ +++|.++|+++|+++|+||+|+. +|++| ..+ +
T Consensus 168 -~d----~~~l~~~l~~---~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g-~g~-~ 233 (407)
T PRK07179 168 -ND----VDHLRRQIER---HGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQG-AGL-V 233 (407)
T ss_pred -CC----HHHHHHHHHh---cCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCC-Cch-H
Confidence 23 5677777753 24678999999999999987 99999999999999999999973 34455 222 3
Q ss_pred cccCCC--CCEEE--eeccccCCccccccccCHHHHHhhcCCc----ccccCCCChHHHHHHHHHHHHHhhh-hHHHHHH
Q 013235 311 EAHGVV--PDIVT--MAKGIGNGIPLGAVVTTPEIAEVLTRRN----YFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAH 381 (447)
Q Consensus 311 ~~~gv~--pDivt--~sK~lg~G~pigav~~~~~i~~~l~~~~----~~~T~~~np~a~aaala~L~~i~~~-~l~~~~~ 381 (447)
+.+++. +|+++ ++|++|+ ++|++++++++++.+.... +.+|+ ++..++++.++|+.+++. ++.++++
T Consensus 234 ~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~ 309 (407)
T PRK07179 234 AELGLTSRVHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLH 309 (407)
T ss_pred HhcCCCCCCCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 556764 48865 6899974 6899999999988775322 22332 355566677888887654 4778899
Q ss_pred HHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 382 VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 382 ~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
++.++|+++|+++ .+ .+++.|.++++++.. ......+.+.|.++||++
T Consensus 310 ~~~~~l~~~L~~~--g~----~v~~~~~i~~l~~~~--------~~~~~~~~~~L~~~GI~~ 357 (407)
T PRK07179 310 ANARFLREGLSEL--GY----NIRSESQIIALETGS--------ERNTEVLRDALEERNVFG 357 (407)
T ss_pred HHHHHHHHHHHHc--CC----CCCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCceE
Confidence 9999999999876 33 345678899988632 123456888999999974
No 95
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=1.8e-26 Score=229.77 Aligned_cols=306 Identities=18% Similarity=0.252 Sum_probs=232.7
Q ss_pred eecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccc--c---cccchHHHHHHHHHHHhCCCCCceE
Q 013235 87 DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST--V---LYLNHAIADFAEALASKMPGNLKVV 161 (447)
Q Consensus 87 ~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~--~---~~~~~~~~elae~L~~~~~~~~~~v 161 (447)
+..+.+++ .+|++++||++|.+ ..|. +||++++|+.+.+++.+... . .+.++.+.+|+++|++++ +.+.+
T Consensus 28 ~~~~~~~~-~~~~~~~nf~SNdY-LGLa-~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--g~e~a 102 (388)
T COG0156 28 RRQGLAIR-ADGRKVLNFCSNDY-LGLA-SHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--GAEAA 102 (388)
T ss_pred ccCCccee-cCCceeEeeeccCc-cccc-CCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--CCCcE
Confidence 33455543 56999999999876 3344 58999999999999864321 1 356889999999999999 45678
Q ss_pred EEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHH
Q 013235 162 FFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAK 241 (447)
Q Consensus 162 ~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~ 241 (447)
++++||..||..++-. ..+++++|..+--.|.+...+..++....+.|.+ +| ++
T Consensus 103 l~f~SGy~AN~~~i~~---l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------------------nD----~~ 156 (388)
T COG0156 103 LLFSSGFVANLGLLSA---LLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------------------ND----LD 156 (388)
T ss_pred EEEcccchhHHHHHHH---hcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------------------CC----HH
Confidence 8999999999999973 3367899999999999988888877655444432 45 67
Q ss_pred HHHHHHHccC--CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCC
Q 013235 242 DVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPD 318 (447)
Q Consensus 242 ~le~~i~~~~--~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pD 318 (447)
+||+.+++.. +.+...|++|.|.++.|.+.| |++|.+++++||+++++||+++ +|-.|++.-++ +++|+.|+
T Consensus 157 ~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~g~~~~ 231 (388)
T COG0156 157 HLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNGRGLAEHFGLEPE 231 (388)
T ss_pred HHHHHHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCCccHHHHhCCCCc
Confidence 8888887621 115789999999999999999 9999999999999999999995 66555433333 78888754
Q ss_pred ---EE--EeeccccC-CccccccccCHHHHHhhcCC--cccccCCCChHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Q 013235 319 ---IV--TMAKGIGN-GIPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKE 389 (447)
Q Consensus 319 ---iv--t~sK~lg~-G~pigav~~~~~i~~~l~~~--~~~~T~~~np~a~aaala~L~~i~~~-~l~~~~~~~g~~l~~ 389 (447)
|+ ||||++|. | |++.+++.+.+.+... .+.+|-+-+|..++++.++|+.+++. +..++++++..+++.
T Consensus 232 ~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~ 308 (388)
T COG0156 232 EVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRS 308 (388)
T ss_pred cceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 44 79999994 5 5789999999998764 45577778899999999999999854 677889999998885
Q ss_pred HHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 390 RLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 390 ~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
.+... .+.. .+..-.++.+.+.+ +..+.++...|+++||++.
T Consensus 309 ~~~~~--~~~~---~~s~s~I~pv~~gd--------~~~a~~~s~~l~~~Gi~v~ 350 (388)
T COG0156 309 LLKAL--GLVL---LPSESPIIPVILGD--------EERALEASRALLEEGIYVS 350 (388)
T ss_pred HHHhc--CCcc---CCCCCCeeeeEeCC--------HHHHHHHHHHHHHCCeeEe
Confidence 54443 2211 23334455555533 3457889999999999986
No 96
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=2.9e-26 Score=232.59 Aligned_cols=313 Identities=15% Similarity=0.152 Sum_probs=215.3
Q ss_pred cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHH
Q 013235 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALAS 152 (447)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~ 152 (447)
|..|..+.+++|+||| .+|++||||.++ ..+|| +||.+++++.+++++..+... .+..+...++++++++
T Consensus 14 ~~~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~ 89 (385)
T TIGR01825 14 YISIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAK 89 (385)
T ss_pred cccccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHH
Confidence 3457889999999999 999999999875 34688 899999999999986533211 2335678899999998
Q ss_pred hCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCC
Q 013235 153 KMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (447)
Q Consensus 153 ~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (447)
.++. +..++.+||++|+..+++... .+++.|+ ....+|+.....+.+.+. .....+
T Consensus 90 ~~g~--~~~i~~~sG~~a~~~a~~~~~--~~gd~vi-~~~~~~~~~~~~~~~~g~------------~~~~~~------- 145 (385)
T TIGR01825 90 FKKT--EAALVFQSGFNTNQGVLSALL--RKGDIVL-SDELNHASIIDGLRLTKA------------TKKIYK------- 145 (385)
T ss_pred HhCC--CcEEEECcHHHHHHHHHHHhC--CCCCEEE-EEccccHHHHHHHHhcCC------------ceEEeC-------
Confidence 8764 345677899999999888653 3445555 555566655544433221 111111
Q ss_pred CCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC--ccccCCCcccc
Q 013235 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGF 310 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--fgr~G~~~~~~ 310 (447)
..| .+++++.+......++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+. ++++| . ...
T Consensus 146 ~~d----~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~-~-~~~ 215 (385)
T TIGR01825 146 HAD----MDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAG-R-GTV 215 (385)
T ss_pred CCC----HHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCC-C-ccH
Confidence 123 455666665432336789999999999998776 89999999999999999999964 44445 2 223
Q ss_pred cccCCCCC----EEEeeccccCCccccccccCHHHHHhhcCCc--ccccCCCChHHHHHHHHHHHHHhh-hhHHHHHHHH
Q 013235 311 EAHGVVPD----IVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVV 383 (447)
Q Consensus 311 ~~~gv~pD----ivt~sK~lg~G~pigav~~~~~i~~~l~~~~--~~~T~~~np~a~aaala~L~~i~~-~~l~~~~~~~ 383 (447)
.++++.+| +.+|||+++. +.|++++++++++.+.... +..+...+|..++++.++|+.+++ +++.++++++
T Consensus 216 ~~~~~~~~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 293 (385)
T TIGR01825 216 HHFGLEDKVDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDN 293 (385)
T ss_pred hhcCCCcCCcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 44455455 3589999963 3478888999988875432 222223578888899999987753 4678888889
Q ss_pred HHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 384 GSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 384 g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++++.+.|+++ .++.+ ...+.++++.+.. ......+++.|+++||++.
T Consensus 294 ~~~l~~~L~~~--g~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~L~~~gi~v~ 341 (385)
T TIGR01825 294 TRFFKAGLGKL--GYDTG---GSETPITPVVIGD--------EKAAQEFSRRLFDEGIFAQ 341 (385)
T ss_pred HHHHHHHHHHc--CCCCC---CCCCCEEEEEECC--------HHHHHHHHHHHHHCCcEEc
Confidence 99999998775 23222 2334456655421 1224578899999999874
No 97
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=1.6e-25 Score=227.83 Aligned_cols=297 Identities=13% Similarity=0.068 Sum_probs=212.5
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~ 171 (447)
.++++|||.++.+ ..|+ +||+|++++.+.+++++..+. ...+..+.+|+++|++++ +.+.+++++||..||
T Consensus 100 ~~r~~l~FsSndY-LGL~-~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--g~e~all~sSGy~AN 175 (476)
T PLN02955 100 RFKKLLLFSGNDY-LGLS-SHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--KKEDCLVCPTGFAAN 175 (476)
T ss_pred CCceEEEeeccCc-cCCC-CCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--CCCcEEEECChHHHH
Confidence 4579999998765 3444 589999999999999864321 234567788999999998 456788999999999
Q ss_pred HHHHHHHHh-----------hcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHH
Q 013235 172 ELAIMMARL-----------YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYA 240 (447)
Q Consensus 172 e~Aik~ar~-----------~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~ 240 (447)
..+|...-. ..+++.+|+.+...|.+....+.++... .++....++ + +| +
T Consensus 176 ~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~--------~~a~~~~f~------H-ND----~ 236 (476)
T PLN02955 176 MAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQ--------GNVEVFVYR------H-CD----M 236 (476)
T ss_pred HHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcccc--------CCceEEEeC------C-CC----H
Confidence 999975421 1256678889999998887777654210 011111111 1 45 6
Q ss_pred HHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC-cccccccCCCCCE
Q 013235 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWGFEAHGVVPDI 319 (447)
Q Consensus 241 ~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~-~~~~~~~gv~pDi 319 (447)
++|+++++.+. ++.+.||+|++.++.|.+.| |++|.++|++||++||+||+++ +|+.|.. ....+++|+.||+
T Consensus 237 ~~Le~~L~~~~-~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e~~g~~~di 310 (476)
T PLN02955 237 YHLNSLLSSCK-MKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAEEFNCEADV 310 (476)
T ss_pred HHHHHHHHhCC-CCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHHHhCCCCCC
Confidence 78888887653 35678999999999999988 9999999999999999999996 4444421 2234788887776
Q ss_pred ----EEeecccc--CCccccccccCHHHHHhhcCCc--ccccCCCChHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Q 013235 320 ----VTMAKGIG--NGIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKER 390 (447)
Q Consensus 320 ----vt~sK~lg--~G~pigav~~~~~i~~~l~~~~--~~~T~~~np~a~aaala~L~~i~~~-~l~~~~~~~g~~l~~~ 390 (447)
.||||++| || ++++++++++.+.... +.+|-+.+|..+++++++|+.++++ ..+++++++.++|++.
T Consensus 311 ~ii~~TLsKA~G~~GG----fi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~ 386 (476)
T PLN02955 311 DLCVGTLSKAAGCHGG----FIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL 386 (476)
T ss_pred cEEEEeCccchhccCc----eeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 58999998 55 4889999999887532 2233345566777888999988544 4567777777777762
Q ss_pred HHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 391 L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+ .++. ...++.|.+. +...+.++.++|+++||++..
T Consensus 387 ~-----G~~~------~sPI~pI~ig--------~~~~a~~~~~~L~~~Gi~v~~ 422 (476)
T PLN02955 387 S-----GVDI------SSPIISLVVG--------NQEKALKASRYLLKSGFHVMA 422 (476)
T ss_pred c-----CCCC------CCCEEEEEeC--------CHHHHHHHHHHHHHCCCEEEE
Confidence 1 2221 1455556653 234567899999999999863
No 98
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=4.8e-25 Score=224.32 Aligned_cols=312 Identities=17% Similarity=0.180 Sum_probs=213.7
Q ss_pred CeEEEeecccEEEecCCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCC
Q 013235 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMP 155 (447)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~ 155 (447)
+..+++++|.++||.+|+.||||.++. ++|| +||++.+++.+++++..+... ....+...++++.|++.++
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCANN---YLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeeccC---ccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 456789999999999999999998753 4677 689999999999987543211 1235667789999999886
Q ss_pred CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCC
Q 013235 156 GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD 235 (447)
Q Consensus 156 ~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d 235 (447)
.. + .+++++|++++..+++.. ..+++.|++.++.|.+........ + ...+..+. .|
T Consensus 102 ~~-~-~i~~tsG~~a~~~~~~~l--~~~gd~vi~~~~~~~~~~~~~~~~-~------------~~~~~~~~-------~d 157 (397)
T PRK06939 102 TE-D-AILYSSCFDANGGLFETL--LGKEDAIISDALNHASIIDGVRLC-K------------AKRYRYAN-------ND 157 (397)
T ss_pred CC-c-EEEEcChHHHHHHHHHHh--CCCCCEEEEEhhhhHHHHHHHHhc-C------------CceEEeCC-------CC
Confidence 43 4 456677899999998754 235678888888776554333221 1 11111111 23
Q ss_pred hHHHHHHHHHHHHccC--CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-Cc-cccCCCccccc
Q 013235 236 GEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GF-ARTGSHFWGFE 311 (447)
Q Consensus 236 ~~~~~~~le~~i~~~~--~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-Gf-gr~G~~~~~~~ 311 (447)
.+++++.+.... ..+++++++++++++.|...+ +++|.++|++||+++|+||+|. |+ ++.| . ....
T Consensus 158 ----~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~-~-~~~~ 227 (397)
T PRK06939 158 ----MADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENG-R-GTVE 227 (397)
T ss_pred ----HHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCC-C-CHHH
Confidence 456666664321 126788999999998887554 9999999999999999999995 43 3334 2 1223
Q ss_pred ccCC--CCCEE--EeeccccCCccccccccCHHHHHhhcCCcccc--cCCCChHHHHHHHHHHHHHhh-hhHHHHHHHHH
Q 013235 312 AHGV--VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFN--TFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVG 384 (447)
Q Consensus 312 ~~gv--~pDiv--t~sK~lg~G~pigav~~~~~i~~~l~~~~~~~--T~~~np~a~aaala~L~~i~~-~~l~~~~~~~g 384 (447)
.+++ .+|++ ++||.+++ .++|++++++++++.+....... +...++..+++++++|+.+++ +++.++++++.
T Consensus 228 ~~~~~~~~~i~~~S~sK~~~g-~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 306 (397)
T PRK06939 228 HFGVMDRVDIITGTLGKALGG-ASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENA 306 (397)
T ss_pred HcCCCCCCcEEEEECHHHhCc-cCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4454 46787 79999964 48999999999998876432222 223456677888888888754 35678888888
Q ss_pred HHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 385 SYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 385 ~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++++.|+++ .+. .+.+.|.++.+.+. ......++++.|+++||.+.
T Consensus 307 ~~l~~~L~~~--~~~---~~~~~~~~~~~~~~--------~~~~~~~~~~~L~~~gI~v~ 353 (397)
T PRK06939 307 RYFREGMTAA--GFT---LGPGEHPIIPVMLG--------DAKLAQEFADRLLEEGVYVI 353 (397)
T ss_pred HHHHHHHHHc--CCC---cCCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCceEe
Confidence 8888888765 222 23355666655441 11235678999999999875
No 99
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=3.1e-25 Score=227.09 Aligned_cols=299 Identities=17% Similarity=0.182 Sum_probs=208.0
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccc----ccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST----VLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~----~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~ 171 (447)
+|+++++|.++.+ ++|| +||+|++|+.++++++.+.. ..+ ..+...+|+++|+++++. +..++++||++||
T Consensus 44 ~~~~~~~~~sn~y-l~l~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~--~~~i~~~sG~~a~ 119 (410)
T PRK13392 44 GPRRVTIWCSNDY-LGMG-QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK--ESALLFTSGYVSN 119 (410)
T ss_pred CCceEEEEECCCc-cCCC-CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC--CCEEEECcHHHHH
Confidence 5789999998655 4566 69999999999999875421 122 234678999999999974 4567888999999
Q ss_pred HHHHHHH-HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 172 ELAIMMA-RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 172 e~Aik~a-r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+.+++.. +.. . .++|+.+..+|+....++..++.. +..++. +| .+++++.++..
T Consensus 120 ~~~i~~l~~~~-~-g~~vi~~~~~h~s~~~~~~~~g~~----------~~~~~~---------~d----~~~l~~~l~~~ 174 (410)
T PRK13392 120 DAALSTLGKLL-P-GCVILSDALNHASMIEGIRRSGAE----------KQVFRH---------ND----LADLEEQLASV 174 (410)
T ss_pred HHHHHHHhcCC-C-CCEEEEehhhhHHHHHHHHHcCCe----------EEEEeC---------CC----HHHHHHHHHhc
Confidence 9999843 322 2 346666777898776555443321 111111 23 34555555543
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-Cc-cccCCCcccccccCC--CCCEE--Eeec
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GF-ARTGSHFWGFEAHGV--VPDIV--TMAK 324 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-Gf-gr~G~~~~~~~~~gv--~pDiv--t~sK 324 (447)
..+++.+|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |+.| ..+ .++.++ .+|++ +|||
T Consensus 175 ~~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g-~g~-~~~~~~~~~~div~~tlsK 248 (410)
T PRK13392 175 DPDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARG-GGI-AERDGLMDRIDMIQGTLAK 248 (410)
T ss_pred cCCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCC-Cch-hhhccCCCCCcEEEEEChH
Confidence 3346789999999999999887 9999999999999999999998 43 6665 222 244454 46887 8999
Q ss_pred cccCCccccccccCHHHHHhhcCCc--ccccCCCChHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 325 GIGNGIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKDK-LQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 325 ~lg~G~pigav~~~~~i~~~l~~~~--~~~T~~~np~a~aaala~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
++|. +-|++++++++++.+.... +..+.+.+|++++++.++|+.++... ..+++++..+++++.|+++ .+..
T Consensus 249 ~~g~--~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~- 323 (410)
T PRK13392 249 AFGC--LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN--GIPV- 323 (410)
T ss_pred hhhc--ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCC-
Confidence 9973 1277888999998765432 23456678899999999999876443 4456777888888888775 2322
Q ss_pred eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 402 ~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
.++.+.++.+.+.+ .....++.+.|+ ++||++..
T Consensus 324 --~~~~~~~~~i~~~~--------~~~~~~~~~~L~~~~GI~v~~ 358 (410)
T PRK13392 324 --MPSPSHIVPVMVGD--------PTLCKAISDRLMSEHGIYIQP 358 (410)
T ss_pred --CCCCCCEEEEEeCC--------HHHHHHHHHHHHHhCCEEEee
Confidence 24566676665521 123567888887 67999864
No 100
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=1.7e-24 Score=220.31 Aligned_cols=316 Identities=17% Similarity=0.184 Sum_probs=215.8
Q ss_pred cCCCeEEEeecccEEEecCCCeEEEecCCcccccCCCC-CHHHHHHHHHHHHhccc--cccc---ccchHHHHHHHHHHH
Q 013235 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHC-HPYVVDSIVNQIKRIQH--STVL---YLNHAIADFAEALAS 152 (447)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~A~~~~l~~~~~--~~~~---~~~~~~~elae~L~~ 152 (447)
++.|..+.+++|.++++.+|++||||.+|. .+|++ ||++++++.+++++.+. .... ...+...+|+++|++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~---~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~ 94 (393)
T TIGR01822 18 FKSERIITSPQGADIRVADGREVLNFCANN---YLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAA 94 (393)
T ss_pred CCcccccccCCCceEEecCCceEEEeeCCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHH
Confidence 445677888999999999999999999884 45666 89999999999987422 2222 225567889999999
Q ss_pred hCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCC
Q 013235 153 KMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (447)
Q Consensus 153 ~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (447)
++.. +.+++++||++|+..++... ..+++.|++.+..|++...+. .+.+.. ++ ...
T Consensus 95 ~~g~--~~~ii~~~~~~a~~~~~~~l--~~~gd~vi~~~~~~~s~~~~~-~~~~~~---------~~-~~~--------- 150 (393)
T TIGR01822 95 FLGT--EDTILYASCFDANGGLFETL--LGAEDAIISDALNHASIIDGV-RLCKAK---------RY-RYA--------- 150 (393)
T ss_pred HhCC--CcEEEECchHHHHHHHHHHh--CCCCCEEEEeccccHHHHHHH-HhcCCc---------eE-EeC---------
Confidence 9964 45667799999999877643 235577777776665443322 221111 11 111
Q ss_pred CCChHHHHHHHHHHHHccC--CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC-ccc
Q 013235 233 GADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWG 309 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~--~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~-~~~ 309 (447)
.+| .+++++.+.... ..++.+|+++++++++|.+.+ +++|.++|++||+++|+||+|. +|..|.. ...
T Consensus 151 ~~d----~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~-~g~~~~~~~~~ 221 (393)
T TIGR01822 151 NND----MADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHA-TGFLGPTGRGS 221 (393)
T ss_pred CCC----HHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCcc-ccCcCCCCCch
Confidence 134 456666665321 126788999999999998876 9999999999999999999993 4333211 111
Q ss_pred ccccCC--CCCEE--EeeccccCCccccccccCHHHHHhhcCCcccccCC--CChHHHHHHHHHHHHHhh-hhHHHHHHH
Q 013235 310 FEAHGV--VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFG--GNPVCTAAGHAVLKVIQK-DKLQNNAHV 382 (447)
Q Consensus 310 ~~~~gv--~pDiv--t~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~--~np~a~aaala~L~~i~~-~~l~~~~~~ 382 (447)
.+..++ .+|++ +++|.++ |+++|++++++++++.+........++ .++..+++++++|+.+++ +++.+++++
T Consensus 222 ~~~~~~~~~~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 300 (393)
T TIGR01822 222 HELCGVMGRVDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWA 300 (393)
T ss_pred HHhcCCCCCCeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 233444 36777 6899997 468999999999998876532222333 356667778888887754 457788899
Q ss_pred HHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 383 ~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+.+++++.|+++ .+.. ..+.+.++.+.+.+ .....++.+.|+++||++.
T Consensus 301 ~~~~l~~~L~~~--g~~~---~~~~~~~~~i~~~~--------~~~~~~l~~~L~~~gI~v~ 349 (393)
T TIGR01822 301 NTRYFRERMEAA--GFDI---KPADHPIIPVMLYD--------AVLAQRFARRLLEEGIYVT 349 (393)
T ss_pred HHHHHHHHHHHc--CCCC---CCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCeeEe
Confidence 999999888764 2322 12345566665421 2235678999999999885
No 101
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.94 E-value=8e-24 Score=212.21 Aligned_cols=307 Identities=17% Similarity=0.176 Sum_probs=209.7
Q ss_pred EeecccEEEecCCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCCCCCc
Q 013235 86 VDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 86 ~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~~~~~ 159 (447)
.++.|.++. .+|++||||.+| .++|| +||+|++++.++++++..... ....+...++++.|++++.. +
T Consensus 4 ~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~--~ 77 (360)
T TIGR00858 4 DRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT--E 77 (360)
T ss_pred ccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--C
Confidence 477899996 899999999997 36896 789999999999987533211 12246678899999998853 3
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHH
Q 013235 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~ 239 (447)
..++.++|++++..+++.+ ..+++.|++.+++ |..........+. .+..++. .|
T Consensus 78 ~~i~~~~G~~~~~~~l~~~--~~~gd~v~~~~~~-~~~~~~~~~~~g~----------~~~~~~~---------~d---- 131 (360)
T TIGR00858 78 AALLFSSGYLANVGVISAL--VGKGDLILSDALN-HASLIDGCRLSGA----------RVRRYRH---------ND---- 131 (360)
T ss_pred CEEEECchHHHHHHHHHHh--CCCCCEEEEEccc-cHHHHHHHHhcCC----------ceEEecC---------CC----
Confidence 4566778899999887644 2345566665554 4444333332211 1112211 23
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC-cccccccCCCCC
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWGFEAHGVVPD 318 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~-~~~~~~~gv~pD 318 (447)
.+++++.+......++++++++++++++|.+.+ +++|.++|+++|+++|+||+|+ +|..+.. ......+++.||
T Consensus 132 ~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 132 VEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred HHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchHHhcCCCcc
Confidence 466777776432135688999999888887765 9999999999999999999996 4433211 112244556554
Q ss_pred -----EEEeeccccCCccccccccCHHHHHhhcCCc--ccccCCCChHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHH
Q 013235 319 -----IVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKER 390 (447)
Q Consensus 319 -----ivt~sK~lg~G~pigav~~~~~i~~~l~~~~--~~~T~~~np~a~aaala~L~~i~~-~~l~~~~~~~g~~l~~~ 390 (447)
+.+++|+++. +.|++++++++++.+.... +..+.+.++.+++++.++|+.++. +++.++++++.+++.+.
T Consensus 207 ~~~i~i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 284 (360)
T TIGR00858 207 PVDIQVGTLSKALGS--YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAG 284 (360)
T ss_pred CCcEEEEechhhhhc--cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 5579999975 2388999999888775322 223445678888888899987754 35778888889999988
Q ss_pred HHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 391 L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
|+++ .+. -....|.++++.+.. .....++++.|+++||++.
T Consensus 285 L~~~--~~~---~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gI~v~ 325 (360)
T TIGR00858 285 LEAL--GFT---LMPSCTPIVPVIIGD--------NASALALAEELQQQGIFVG 325 (360)
T ss_pred HHHc--CCc---cCCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCeeEe
Confidence 8775 222 123457788887631 1234678999999999985
No 102
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=8.8e-23 Score=206.02 Aligned_cols=297 Identities=16% Similarity=0.158 Sum_probs=198.7
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhC------CCCCceEEEcCCHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM------PGNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~------~~~~~~v~~~~sGseA~e~ 173 (447)
..||+..|.. +++ .+|.+.+++.+.+.........|+.+...+|.+.+++++ +.+.++|+++++++|++..
T Consensus 27 ~~i~l~~~~~--~~~-~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNEN--PYP-PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCC--CCC-CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 4688887765 556 789999999988764322234566555667777787776 3456789999999999999
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 174 Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
+++... ..++.|++..++|++....+... |+..++.|. ...|+.| .+++++.+...
T Consensus 104 ~~~~~~--~~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~~~~--~~~~~~d----~~~l~~~~~~~--- 159 (368)
T PRK03317 104 LLQAFG--GPGRTALGFVPSYSMHPIIARGT-------------HTEWVEGPR--AADFTLD----VDAAVAAIAEH--- 159 (368)
T ss_pred HHHHhc--CCCCEEEEeCCChHHHHHHHHhc-------------CCeeEEccc--CCCCCCC----HHHHHHHHhcc---
Confidence 998553 25678999999998766544321 233333322 1123344 56677666532
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CC
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NG 329 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G 329 (447)
++.++++...++++|.+.+ .++++++|+.+++++|+||+|++|++.| .....+..+..|+++ +|||.+| .|
T Consensus 160 ~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~-~~~~~~~~~~~~~~i~~~SfSK~~g~~G 234 (368)
T PRK03317 160 RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSG-TPSALTLLPEYPRLVVSRTMSKAFAFAG 234 (368)
T ss_pred CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccC-CcCHHHHHHhCCCEEEEEechhhhccch
Confidence 2233444444677888876 7788888888899999999999998776 344445555567877 8999998 79
Q ss_pred ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecce
Q 013235 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (447)
Q Consensus 330 ~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl 409 (447)
+|+|++++++++++.+.... .+|+.++++++++.++|+.. +.+.++.+++.+ .++.+.+..++++. .-....|.
T Consensus 235 lRiG~~~~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~-~~~~l~~~L~~~g~-~~~~~~~~ 308 (368)
T PRK03317 235 GRLGYLAAAPAVVDALRLVR--LPYHLSAVTQAAARAALRHA--DELLASVAALRA-ERDRVVAWLRELGL-RVAPSDAN 308 (368)
T ss_pred hhhhhhhCCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHH-HHHHHHHHHHHCCC-EeCCCCCc
Confidence 99999999999999887533 47889999999999998643 234444433322 23333333334432 22334454
Q ss_pred eEEE-EEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 410 LLGV-EFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 410 ~~gi-el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+ .+ + ...++.+.|+++||++..
T Consensus 309 ~~~~~~~--------~---~~~~~~~~l~~~Gv~v~~ 334 (368)
T PRK03317 309 FVLFGRF--------A---DRHAVWQGLLDRGVLIRD 334 (368)
T ss_pred EEEEecc--------C---CHHHHHHHHHHCCEEEEe
Confidence 4433 22 1 135688899999999864
No 103
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=1.2e-21 Score=198.02 Aligned_cols=287 Identities=14% Similarity=0.130 Sum_probs=191.6
Q ss_pred CeEEEecCCcccccCCCC-CHHHHHHHHHHHHhc--------cccccc----ccchHHHHHHHHHHHhCCCCCceEEEcC
Q 013235 99 RRYLDAFGGIATVCCGHC-HPYVVDSIVNQIKRI--------QHSTVL----YLNHAIADFAEALASKMPGNLKVVFFTN 165 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~-~p~v~~A~~~~l~~~--------~~~~~~----~~~~~~~elae~L~~~~~~~~~~v~~~~ 165 (447)
.++|||.++.+ ||++ ||.+.+++.+++.+. .|.... ..++.+.+++++|+++++. +.+++++
T Consensus 4 ~~~~~~~s~~Y---L~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~--~~~l~~~ 78 (370)
T PRK05937 4 SLSIDFVTNDF---LGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA--PEAFIVP 78 (370)
T ss_pred CceEEeECCCc---cCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CeEEEEC
Confidence 35788887654 6665 899999999998775 222221 2467889999999999965 4568899
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHH
Q 013235 166 SGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQD 245 (447)
Q Consensus 166 sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~ 245 (447)
||+.||...+. .+.++.++|+.+..+|+....++..... +. +.++ . +| .++|++
T Consensus 79 sG~~a~~~~~~---~~~~~~d~ii~d~~~H~sv~~~~~~~~~--~~----------~~~~------~-~d----~~~l~~ 132 (370)
T PRK05937 79 SGYMANLGLCA---HLSSVTDYVLWDEQVHISVVYSLSVISG--WH----------QSFR------H-ND----LDHLES 132 (370)
T ss_pred ChHHHHHHHHH---HhCCCCCEEEEEhhhhHHHHHHHHHcCC--ce----------EEec------C-CC----HHHHHH
Confidence 99999864433 2345678999999999998887655321 11 1111 1 34 567777
Q ss_pred HHHccC--CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-C-ccccCCCcccc--cccCCCCCE
Q 013235 246 LIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-G-FARTGSHFWGF--EAHGVVPDI 319 (447)
Q Consensus 246 ~i~~~~--~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-fgr~G~~~~~~--~~~gv~pDi 319 (447)
+++... +++..+|+++++++++|.+.| +++|.++|+++|+++|+||+|+ | +|++| ..+.. ...++.+|+
T Consensus 133 ~l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~~~~~~ 207 (370)
T PRK05937 133 LLESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYENFYAVL 207 (370)
T ss_pred HHHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCCCcEEE
Confidence 776432 124557889999999999998 9999999999999999999997 4 56666 22211 111233678
Q ss_pred EEeeccccC-CccccccccCHHHHHhhcC--CcccccCCCChHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHH
Q 013235 320 VTMAKGIGN-GIPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVCTAAGHAVLKVIQKD--KLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 320 vt~sK~lg~-G~pigav~~~~~i~~~l~~--~~~~~T~~~np~a~aaala~L~~i~~~--~l~~~~~~~g~~l~~~L~~l 394 (447)
.||||++|+ | ++++..+++.+.+.. ..+..+.+.+|.+++++.++++.++++ ...++++++.++|++.|...
T Consensus 208 ~tlsK~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~ 284 (370)
T PRK05937 208 VTYSKALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA 284 (370)
T ss_pred EechhhhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC
Confidence 899999985 5 335566776555432 234455567888888888999988654 24455666666665544321
Q ss_pred HHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 395 KDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 395 ~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+.+....+.+.. .....+.+.|.++||++.
T Consensus 285 -----------~~~~~~~i~~~~---------~~~~~~~~~L~~~gi~v~ 314 (370)
T PRK05937 285 -----------APGCVQPIFLPG---------ISEQELYSKLVETGIRVG 314 (370)
T ss_pred -----------CCCCEEEEEeCC---------hhHHHHHHHHHHCCeeEE
Confidence 112233344421 123568888999999886
No 104
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=197.18 Aligned_cols=294 Identities=13% Similarity=0.099 Sum_probs=195.4
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
.+|||.+|.. ++| .+|.+.+|+.++++.+. .|+.....++.+.+++++..+.+++++++++++++..+++...
T Consensus 30 ~~i~l~~n~~--~~~-~~~~v~~a~~~~~~~~~----~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~ 102 (359)
T PRK03158 30 KIVKLASNEN--PYG-PSPKVKEAIAAHLDELA----LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL 102 (359)
T ss_pred ceEEecCCCC--CCC-CCHHHHHHHHHHHHHhh----cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh
Confidence 6899998876 467 58999999998877642 3455567789999999887666789999999999988876442
Q ss_pred hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEE
Q 013235 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (447)
Q Consensus 180 ~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi 259 (447)
..++.|++.+++|++....+.... ..+..++.. .++.| .+++++.+. + ++.+++
T Consensus 103 --~~gd~v~~~~p~y~~~~~~~~~~g-----------~~~~~~~~~-----~~~~d----~~~l~~~~~---~-~~~~v~ 156 (359)
T PRK03158 103 --NPGTNTVMAEPTFSQYRHNAIIEG-----------AEVREVPLK-----DGGHD----LEAMLKAID---E-QTKIVW 156 (359)
T ss_pred --CCCCEEEEcCCCHHHHHHHHHHcC-----------CeEEEEecC-----CCCcC----HHHHHHhcC---C-CCCEEE
Confidence 356789999999987554332211 012223221 12233 455555543 2 344555
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHH--hCCEEEEeccccCccccCCCcccccccCCCCC-EE--Eeecccc-CCcccc
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAHGVVPD-IV--TMAKGIG-NGIPLG 333 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD-iv--t~sK~lg-~G~pig 333 (447)
+...++++|.+.+ .+++.++++. +|+++|+||+|..|-..+.........+..+. ++ +|||.+| .|+|+|
T Consensus 157 i~~p~NPtG~~~~----~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG 232 (359)
T PRK03158 157 ICNPNNPTGTYVN----HEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVG 232 (359)
T ss_pred EeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhe
Confidence 5555788888875 3445555544 69999999999877433311111111111222 33 7999999 799999
Q ss_pred ccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEE
Q 013235 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (447)
Q Consensus 334 av~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gi 413 (447)
++++++++++.+.... .+|+.|++++.++.++|+ ++++.+++++..+..++.+.+..++++ +..+++.|+++++
T Consensus 233 ~~v~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~ 306 (359)
T PRK03158 233 YGIASEELIEKLNIAR--PPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFV 306 (359)
T ss_pred hhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEE
Confidence 9999999998886432 457889999999988885 345555555554555555555555553 3335677899988
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
++..+ ..++++.|+++||++.+.
T Consensus 307 ~~~~~----------~~~~~~~l~~~gv~v~~g 329 (359)
T PRK03158 307 DTGRD----------ANELFEALLKKGYIVRSG 329 (359)
T ss_pred ECCCC----------HHHHHHHHHHCCeEEeeC
Confidence 87311 356888999999999763
No 105
>PLN02483 serine palmitoyltransferase
Probab=99.89 E-value=5.7e-21 Score=199.07 Aligned_cols=304 Identities=16% Similarity=0.153 Sum_probs=199.0
Q ss_pred cCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc--ccc--c-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHH
Q 013235 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS--TVL--Y-LNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~--~~~--~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA 170 (447)
.+++++|+|.|+.+ ..|+.+|+.+.+++.+++++++.. ..+ | .++.+.+++++|++++.. +..++.++|+.+
T Consensus 97 ~~~~~~~n~~s~~Y-Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~--~~ai~~~~G~~a 173 (489)
T PLN02483 97 TKTRRCLNLGSYNY-LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK--PAAIVFGMGYAT 173 (489)
T ss_pred CCCceEEEeecCCc-cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHH
Confidence 35789999987665 334434678888888888886532 222 3 478889999999999963 335566889999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
|..++... ..+++.|++.+.+|.+... ..... |......|. +|.+.+.+.+++.+...
T Consensus 174 n~~~i~al--~~~Gd~Vi~d~~~h~s~~~-~~~~~------------Ga~v~~~~~-------~d~~~le~~l~~~i~~~ 231 (489)
T PLN02483 174 NSTIIPAL--IGKGGLIISDSLNHNSIVN-GARGS------------GATIRVFQH-------NTPSHLEEVLREQIAEG 231 (489)
T ss_pred HHHHHHHh--CCCCCEEEEcchhhHHHHH-HHHHc------------CCeEEEEeC-------CCHHHHHHHHHhhhhcc
Confidence 98777643 2355667766666655333 32222 222222211 23222222233322211
Q ss_pred -----CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC--ccccCCCcccccccCCCC---CEE
Q 013235 251 -----TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGFEAHGVVP---DIV 320 (447)
Q Consensus 251 -----~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--fgr~G~~~~~~~~~gv~p---Div 320 (447)
.|.....|++|++.++.|.+.+ +++|.++|++||+++|+||+|+- +|++| .. ..+++++.| ||+
T Consensus 232 ~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G-~g-~~~~~~v~~~~~dI~ 305 (489)
T PLN02483 232 QPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTG-RG-VCELLGVDPADVDIM 305 (489)
T ss_pred ccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCC-Cc-hHHhcCCCcccCcEE
Confidence 1223468999999999998887 99999999999999999999962 45555 22 335666644 677
Q ss_pred --EeeccccCCccccccccCHHHHHhhcCCcccccCC--CChHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHH
Q 013235 321 --TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFG--GNPVCTAAGHAVLKVIQKD-------KLQNNAHVVGSYLKE 389 (447)
Q Consensus 321 --t~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~--~np~a~aaala~L~~i~~~-------~l~~~~~~~g~~l~~ 389 (447)
+|+|++|. +.|++++++++++.+.......+|+ .+|..+++++++|+.+..+ +..++++++.++|++
T Consensus 306 ~~SfSKs~g~--~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~ 383 (489)
T PLN02483 306 MGTFTKSFGS--CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRS 383 (489)
T ss_pred EEecchhccc--CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHH
Confidence 89999973 2278999999999887544444444 4678888888899887532 345677788888888
Q ss_pred HHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 390 RLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 390 ~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
.|+++ .+.+... ..+.++++.+.. .....++.++|+++||++.
T Consensus 384 ~L~~~--G~~v~~~--~~sp~~~l~l~~--------~~~~~~~~~~Ll~~GI~v~ 426 (489)
T PLN02483 384 ELQKM--GFEVLGD--NDSPVMPIMLYN--------PAKIPAFSRECLKQNVAVV 426 (489)
T ss_pred HHHHC--CCcccCC--CCCCEEEEEECC--------HHHHHHHHHHHHHCCcEEe
Confidence 88775 2322211 224566666532 1235678999999999986
No 106
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.9e-21 Score=193.56 Aligned_cols=308 Identities=15% Similarity=0.120 Sum_probs=200.9
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Ai 175 (447)
++..+||+..+.. .++ .+|.+.+++.+.+.... ...|.. ....++.++++++++.+.++|++++|+++|+..++
T Consensus 26 ~~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~ 100 (380)
T PRK06225 26 KDKEMIWMGQNTN--HLG-PHEEVREAMIRCIEEGE--YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVM 100 (380)
T ss_pred hcCCeEEccCCCC--CCC-CCHHHHHHHHHHHhcCC--CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHH
Confidence 3457888887655 455 68999999998887531 123433 35678999999998766678999999999999999
Q ss_pred HHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCC-cCCCCCCChHHHHHHHHHHHHccCCCC
Q 013235 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP-YRGVFGADGEMYAKDVQDLIDFGTSGH 254 (447)
Q Consensus 176 k~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~-~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (447)
+... ..++.|++.+++|+.....+... |...++.|.. ....|..| .+++++.+. ++.
T Consensus 101 ~~~~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~d----~~~l~~~~~---~~~ 158 (380)
T PRK06225 101 RAFL--SPGDNAVTPDPGYLIIDNFASRF-------------GAEVIEVPIYSEECNYKLT----PELVKENMD---ENT 158 (380)
T ss_pred HHhc--CCCCEEEEcCCCCcchHHHHHHh-------------CceEEeeccccccCCccCC----HHHHHhhcC---CCc
Confidence 8653 24577999999987543222111 2223333211 11123334 455665553 222
Q ss_pred eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc-cCCCCCEEEeecccc-CCccc
Q 013235 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA-HGVVPDIVTMAKGIG-NGIPL 332 (447)
Q Consensus 255 ~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~-~gv~pDivt~sK~lg-~G~pi 332 (447)
.+.++++| ++++|.+. +.+.+++|.++|+++|+++|+||+|.+|.. + .....+. .+...++.+|||.+| .|+++
T Consensus 159 ~~v~l~~p-~NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~-~~~~~~~~~~~~i~~~s~SK~~g~~G~Ri 234 (380)
T PRK06225 159 RLIYLIDP-LNPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFAR-E-HTLAAEYAPEHTVTSYSFSKIFGMAGLRI 234 (380)
T ss_pred eEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHhc-c-CCchhhcCCCCEEEEeechhhcCCcccee
Confidence 24445667 45667655 677899999999999999999999987742 2 2111111 122234568999998 79999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCC--eeeEeeccee
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGI--IGDVRGRGFL 410 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~--i~~vrg~Gl~ 410 (447)
|++++++++++.+... ..++++.|.++++++.+.|+. .+++.+++++..+..++.+.+..++++. +..++..|.|
T Consensus 235 G~i~~~~~l~~~~~~~-~~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 311 (380)
T PRK06225 235 GAVVATPDLIEVVKSI-VINDLGTNVIAQEAAIAGLKV--KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311 (380)
T ss_pred EEEecCHHHHHHHHHH-HhcccCCCHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeE
Confidence 9999999999887643 235778899998888888864 2345555555444444444444444321 2234567889
Q ss_pred EEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 411 LGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 411 ~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++++.... ....++.+.|.++||.+.+
T Consensus 312 ~~~~~~~~~-------~~~~~l~~~l~~~gi~v~~ 339 (380)
T PRK06225 312 MVIDISEAG-------IDPEDLVEYLLERKIFVRQ 339 (380)
T ss_pred EEEEccccc-------CCHHHHHHHHHHCCEEEcC
Confidence 998884321 0135688888999999865
No 107
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=5.3e-21 Score=192.90 Aligned_cols=298 Identities=17% Similarity=0.201 Sum_probs=197.3
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
++++++||.+|.. ++| .+|.+.+++.+.+... ..|+.....+|++.++++++.+.++|++++++++++..++.
T Consensus 30 ~~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNEN--PLG-PSPKAIEAIRAAADEL----HRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHHHhh----cCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 6778999998775 457 5789999998887653 23554445789999999987666789999999999887776
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
.. ...++.|++.+++|.+........ |...+..|. ..++.| ++++++.+. + ++.
T Consensus 103 ~l--~~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~---~~~~~~----~~~l~~~~~---~-~~~ 156 (367)
T PRK02731 103 AY--LGPGDEVIYSEHGFAVYPIAAQAV-------------GAKPVEVPA---KDYGHD----LDAMLAAVT---P-RTR 156 (367)
T ss_pred Hh--cCCCCEEEEecCCHHHHHHHHHHc-------------CCeEEEecc---cCCCCC----HHHHHHHhC---C-CCc
Confidence 43 235678999999986544332221 222222222 123334 566666664 2 345
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHH--hCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGI 330 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~ 330 (447)
+|++...++++|.+.+ ++++.++|+. +|+++|+||+|..+.+.+....++...+..++++ +|||.+| .|+
T Consensus 157 ~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 232 (367)
T PRK02731 157 LVFIANPNNPTGTYLP----AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGL 232 (367)
T ss_pred EEEEeCCCCCCCcCCC----HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCccc
Confidence 5555556677887775 4555555555 4999999999988765442222233333345665 6899997 799
Q ss_pred cccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeeccee
Q 013235 331 PLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410 (447)
Q Consensus 331 pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~ 410 (447)
|+|++++++++++.+.... .+|+.+++++.++.+.|+ ++++.++.++..+..++.+.+..++++. ...++.|.+
T Consensus 233 RiG~l~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~~ 306 (367)
T PRK02731 233 RVGYGIAPPEIIDALNRVR--QPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGL-EYIPSVGNF 306 (367)
T ss_pred ceeeeeCCHHHHHHHHHcc--CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCceE
Confidence 9999999999998876432 456778888888877774 3444455555444455555555445442 223556899
Q ss_pred EEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 411 LGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 411 ~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++++.+. ....++.+.|.++||++.+
T Consensus 307 ~~i~~~~~--------~~~~~~~~~L~~~gI~v~~ 333 (367)
T PRK02731 307 ILVDFDDG--------KDAAEAYQALLKRGVIVRP 333 (367)
T ss_pred EEEECCCC--------CCHHHHHHHHHHCCEEEEe
Confidence 99987221 1145788899999999874
No 108
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.88 E-value=8.6e-21 Score=189.20 Aligned_cols=292 Identities=18% Similarity=0.190 Sum_probs=212.0
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCC-CCCceEEEcCCHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP-GNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~-~~~~~v~~~~sGseA~e~Aik~a 178 (447)
..+|+.+|.+ ++| ..|++.+++.+.++.+ .+|+++...++.+.+++++. ...+.|+.+|+.+|.++..+++.
T Consensus 23 ~~i~LssNen--P~g-p~~~~~~~~~~~~~~~----~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNEN--PYG-PPPKVIEAIRAALDKL----NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCCC--CCC-CCHHHHHHHHHHHHhh----ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh
Confidence 7899999887 677 5689999998888754 56888889999999999987 56678999999999999999876
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
.. +++.|++..++|.-+...+...+. .++.++..+ |..| ++.+.+.+.. +.-..+
T Consensus 96 ~~--~gd~vl~~~Ptf~~Y~~~a~~~g~-----------~~~~v~~~~-----~~~d----~~~~~~~~~~---~~~lv~ 150 (356)
T COG0079 96 VE--PGDTVLIPEPTFSMYEIAAQLAGA-----------EVVKVPLKE-----FRLD----LDAILAAIRD---KTKLVF 150 (356)
T ss_pred hc--CCCEEEEcCCChHHHHHHHHhcCC-----------eEEEecccc-----cccC----HHHHHHhhhc---CCCEEE
Confidence 64 457999999999655554443321 233333221 4344 3344433332 234578
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGA 334 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~piga 334 (447)
|++|.+.+|..+ +.+.++++.+.|.+ +++||+||+|..|... .. .....-.++++ ||||++| .|+|+|+
T Consensus 151 i~nPNNPTG~~~--~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~--~~--~~l~~~~~nlivlRTfSKa~gLAGlRlGy 223 (356)
T COG0079 151 LCNPNNPTGTLL--PREELRALLEALPE-GGLVVIDEAYIEFSPE--SS--LELLKYPPNLIVLRTFSKAFGLAGLRVGY 223 (356)
T ss_pred EeCCCCCCCCCC--CHHHHHHHHHhCCC-CcEEEEeCchhhcCCc--hh--hhhccCCCCEEEEEecHHhhhcchhceee
Confidence 888988776443 45556777777767 9999999999999651 11 22222233355 7999999 7999999
Q ss_pred cccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee-eEeecceeEEE
Q 013235 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRGRGFLLGV 413 (447)
Q Consensus 335 v~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~vrg~Gl~~gi 413 (447)
+++++++++.+... -..|+.|.++.++|.++|+ +.++++...+....-+++|.+..++++ +. -.++.++|+.+
T Consensus 224 ~ia~~~~i~~l~~v--r~p~~v~~~a~~aa~aal~---~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv 297 (356)
T COG0079 224 AIANPELIAALNKV--RPPFNVSSPALAAAIAALR---DADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLV 297 (356)
T ss_pred ccCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEE
Confidence 99999999999753 3778899999999999886 335666666666666777777666666 33 45777999988
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+ .. +..+.+.|+++||+++.
T Consensus 298 ~~~~--------~~-~~~l~~~L~~~giivR~ 320 (356)
T COG0079 298 RVPD--------AE-AAALAEALLKKGILVRD 320 (356)
T ss_pred ECCC--------cc-HHHHHHHHHHCCEEEEe
Confidence 8732 22 45789999999999985
No 109
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.88 E-value=7.4e-21 Score=182.65 Aligned_cols=295 Identities=17% Similarity=0.189 Sum_probs=214.9
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELA 174 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~A 174 (447)
++-=|++|.+. .++ .||+|.+|+.+.+++.+.+.. .+.+....+|+.+|+++.. .+..++++|..-||+..
T Consensus 172 ~VtVWCSNDYL-gms-~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--K~aALlFsSCfVANDst 247 (570)
T KOG1360|consen 172 KVTVWCSNDYL-GMS-RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--KEAALLFSSCFVANDST 247 (570)
T ss_pred ceEEEecCccc-ccc-CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--CcceeeeeeeeeccchH
Confidence 34444555442 233 589999999999999754221 2456677899999999874 45667789999999998
Q ss_pred HHH-HHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 175 IMM-ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 175 ik~-ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
+-. ++..+ .-+|.-+.+.|.+....+..++.+.+.|.+ || +++|++++++..+.
T Consensus 248 LftLak~lp--gcei~SD~gNHASMI~GIrns~v~K~IFrH-------------------ND----~~hL~~lL~~~~~s 302 (570)
T KOG1360|consen 248 LFTLAKKLP--GCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------------------ND----LDHLEQLLQSSPKS 302 (570)
T ss_pred HHHHHHHCC--CcEEeccccchHHHHHHhhhcCCcceeecc-------------------CC----HHHHHHHHHhCCCC
Confidence 864 44432 345666788898887777666655544433 55 78899999987777
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCC--CCCEE--EeeccccC
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGV--VPDIV--TMAKGIGN 328 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv--~pDiv--t~sK~lg~ 328 (447)
.+..|-+|.+.++.|.++| |++|+++++|||++-.+|||+. .|-.|++..+. |+-|+ +.||+ |+||++|.
T Consensus 303 vPKivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc 377 (570)
T KOG1360|consen 303 VPKIVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC 377 (570)
T ss_pred CCceEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhccc
Confidence 8889999999999999999 9999999999999999999996 66667655555 67777 56888 69999994
Q ss_pred -CccccccccCHHHHHhhcCC--cccccCCCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 329 -GIPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 329 -G~pigav~~~~~i~~~l~~~--~~~~T~~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
| ||+..+..++|++... .+..|.+..|..++.|++++++++.+ .+...-++.-+++++.|.++ .+|.+.
T Consensus 378 VG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~--GiPVi~ 452 (570)
T KOG1360|consen 378 VG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL--GIPVIP 452 (570)
T ss_pred cc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc--CCcccC
Confidence 4 5799999999998763 36688889999999999999998754 24444555667777777765 333221
Q ss_pred eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceee
Q 013235 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFF 444 (447)
Q Consensus 403 ~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~ 444 (447)
.-.-++.+.+ .+.....++.+.|+ +.||+|.
T Consensus 453 ---~pSHIiPv~v--------gda~l~~~~sd~Li~~h~iYvQ 484 (570)
T KOG1360|consen 453 ---NPSHIIPVRV--------GDAALAKQASDILISKHNIYVQ 484 (570)
T ss_pred ---CCcceeeeec--------cCHHHHHHHHHHHHHhcCeEEE
Confidence 1122333333 23445677888777 4689885
No 110
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=6.3e-21 Score=192.28 Aligned_cols=297 Identities=12% Similarity=0.115 Sum_probs=204.1
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
+++..||+..|.. ++| .+|.+.+++.+.+... ..|+.....+|.+.|++++..+.++|+++++++|++..+++
T Consensus 27 ~~~~~i~l~~nen--~~~-~~~~v~~a~~~~~~~~----~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 27 GDHSFVKLASNEN--PFG-CSPRVLDELQKSWLDH----ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISR 99 (366)
T ss_pred CCCceEEeCCCCC--CCC-CCHHHHHHHHHHHHhc----CcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 3567899988776 667 6789999998876553 24666677889999999987778899999999999999988
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
... .+++.|++.+++|.+....+... |...+..|.. .++.| .+++++.+.. +...
T Consensus 100 ~l~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~---~~~~d----~~~l~~~~~~---~~~~ 154 (366)
T PRK01533 100 AVL--KAGDNIVTAGATFPQYRHHAIIE-------------GCEVKEVALN---NGVYD----LDEISSVVDN---DTKI 154 (366)
T ss_pred Hhc--CCCCEEEEcCCcHHHHHHHHHHc-------------CCEEEEeecC---CCCcC----HHHHHHHhCc---CCcE
Confidence 543 25578999999997666544322 2222222221 12233 5667666642 2334
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 332 (447)
.+|+.| ++++|.+. +.+.+++|.++|++++ ++|+||+|..|...+...-.....+-.+.++ +|||.+| .|+++
T Consensus 155 v~i~~P-~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRi 231 (366)
T PRK01533 155 VWICNP-NNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRV 231 (366)
T ss_pred EEEeCC-CCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHH
Confidence 555556 56677766 6777888888888876 6778999988753321111111122223444 5899999 89999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEE
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~g 412 (447)
||+++++++++.+.... .+|+.|.+++.++.++|+ ++++.+++++..+..++.+.++.+.++ +.-.++.|+|++
T Consensus 232 G~~i~~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~ 305 (366)
T PRK01533 232 GYAVGHEELIEKLNVVR--LPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIF 305 (366)
T ss_pred hHHhCCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEE
Confidence 99999999998886532 468889999999988884 455665555555555666666655554 233466799999
Q ss_pred EEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 413 VEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 413 iel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++. + ..++.+.|+++||+|++
T Consensus 306 ~~~~-~----------~~~~~~~l~~~GI~Vr~ 327 (366)
T PRK01533 306 LPVE-N----------GGEIYEACAHAGFIIRP 327 (366)
T ss_pred EeCC-C----------HHHHHHHHHHCCcEEcc
Confidence 9872 1 24688999999999974
No 111
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.87 E-value=5.5e-20 Score=170.49 Aligned_cols=327 Identities=16% Similarity=0.166 Sum_probs=219.3
Q ss_pred HHHHHHHhhhcCCcccc-----ccCCCeEEEeecccEEEecCC--CeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcc
Q 013235 61 DEILAKRKTFLSPSLFH-----LYSKPLNVVDGKMQYLFDENG--RRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQ 132 (447)
Q Consensus 61 ~~~~~~~~~~~~~~~~~-----~~~~p~~~~~g~G~~l~d~dG--~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~ 132 (447)
++.+.+.+..+...+.. -|+.--++++.+|..+. ++| +.+|.|++|.+ ||. +||+|.+|.+++++.++
T Consensus 23 q~~~~q~r~~l~~~legi~gagtwk~erVi~s~q~p~i~-v~G~~k~ilnFcaNnY---LGLsshPeii~a~~~aleeyG 98 (417)
T KOG1359|consen 23 QEAIAQLRAILGDELEGIKGAGTWKRERVITSRQGPTIQ-VKGSDKKILNFCANNY---LGLSSHPEIINAGQKALEEYG 98 (417)
T ss_pred HHHHHHHHHhccCccceecccccceeeeEEeecccceEE-Eeccccceeeeccccc---ccccCChHHHHHHHHHHHHhC
Confidence 44555656655433211 24556788888998874 565 57999997654 555 59999999999999875
Q ss_pred cccc-----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCC
Q 013235 133 HSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ 207 (447)
Q Consensus 133 ~~~~-----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~ 207 (447)
-... .++...+..|+.+|+++. +.+..++++|+.+||..++.... ++ ++.|.-+.-.|.+......+..
T Consensus 99 aGlssvrfIcGtq~iHk~LE~kiAqfh--~rED~ilypscfdANag~feail--~p-edAvfSDeLNhASIIdGirLck- 172 (417)
T KOG1359|consen 99 AGLSSVRFICGTQDIHKLLESKIAQFH--GREDTILYPSCFDANAGAFEAIL--TP-EDAVFSDELNHASIIDGIRLCK- 172 (417)
T ss_pred CCccceeEEecchHHHHHHHHHHHHHh--CCCceEEeccccccchHHHHHhc--Ch-hhhhhccccccchhhhhhHHHh-
Confidence 4321 245778889999999987 34667899999999999887542 23 3333345555655554443331
Q ss_pred CCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHh
Q 013235 208 SNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA 287 (447)
Q Consensus 208 ~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~ 287 (447)
.|+. .| ..+++.-+....+-+...|+.|.+.++.|.+.| |++|.+|+++|
T Consensus 173 -------------------ry~h---~d----v~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kY 222 (417)
T KOG1359|consen 173 -------------------RYRH---VD----VFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKY 222 (417)
T ss_pred -------------------hhcc---ch----hHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhc
Confidence 1111 12 233443333222347889999999999999999 99999999999
Q ss_pred CCEEEEecccc-C-ccccCCCcccccccCC--CCCEE--EeeccccCCccccccccCHHHHHhhcCCccc--ccCCCChH
Q 013235 288 GGLCIADEVQA-G-FARTGSHFWGFEAHGV--VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYF--NTFGGNPV 359 (447)
Q Consensus 288 g~llI~DEv~t-G-fgr~G~~~~~~~~~gv--~pDiv--t~sK~lg~G~pigav~~~~~i~~~l~~~~~~--~T~~~np~ 359 (447)
|.|+++||.+. | ||.|| . ..-|.+|+ .+||+ |+||++||. --|++.+++++++.+.++... .+-+..|.
T Consensus 223 gaLlfiDecHaTgf~G~tG-r-Gt~E~~~vm~~vdiinsTLgKAlGga-~GGyttgp~~li~llrqr~RpylFSnslppa 299 (417)
T KOG1359|consen 223 GALLFIDECHATGFFGETG-R-GTAEEFGVMGDVDIINSTLGKALGGA-SGGYTTGPKPLISLLRQRSRPYLFSNSLPPA 299 (417)
T ss_pred CcEEEEeecccceeecCCC-C-ChHHHhCCCCcceehhhhhhhhhcCC-CCCCccCChhHHHHHHhcCCceeecCCCChh
Confidence 99999999974 4 36666 2 23477886 67877 899999841 126799999999999876433 33334455
Q ss_pred HHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeec-ceeEEEEEeeCCCCCCCCHHHHHHHHHHHH
Q 013235 360 CTAAGHAVLKVI-QKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (447)
Q Consensus 360 a~aaala~L~~i-~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-Gl~~giel~~~~~~~~p~~~~~~~~~~~l~ 437 (447)
....+.++++.+ .........+.+-+++++..+.. .+. +.|. -.++.+-+ .+...+.++.++|+
T Consensus 300 vV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a--Gft----Isg~~hPI~pv~l--------Gda~lA~~~ad~lL 365 (417)
T KOG1359|consen 300 VVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA--GFT----ISGASHPICPVML--------GDARLASKMADELL 365 (417)
T ss_pred hhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc--Cce----ecCCCCCccceec--------ccHHHHHHHHHHHH
Confidence 556667777765 35567777888888888766553 221 1111 12233333 23457889999999
Q ss_pred hCCceee
Q 013235 438 GICALFF 444 (447)
Q Consensus 438 ~~Gvlv~ 444 (447)
++|++|-
T Consensus 366 k~Gi~Vi 372 (417)
T KOG1359|consen 366 KRGIYVI 372 (417)
T ss_pred hcCceEE
Confidence 9999984
No 112
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=9.8e-21 Score=191.20 Aligned_cols=295 Identities=16% Similarity=0.147 Sum_probs=199.2
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
+.+|++..|.. .+| .+|.+.+|+.+.+... ..|+.+...+|.++|++++..+.++|+++++.++++..+++..
T Consensus 32 ~~~~~l~~~~~--~~~-~~~~~~~a~~~~~~~~----~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~ 104 (369)
T PRK08153 32 PFRARIGANES--GFG-PSPSVIAAMREAAAEI----WKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLY 104 (369)
T ss_pred cceeEecCCCC--CCC-CCHHHHHHHHHHHHHh----hcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh
Confidence 35678887765 566 6899999998876542 2345445678999999998766678999999999999988754
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
. ..++.|++.+++|.+....+... |...+..|. +. ...| .+++++.+. .+++.++
T Consensus 105 ~--~~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~vp~--~~-~~~~----~~~l~~~~~---~~~~~~i 159 (369)
T PRK08153 105 V--EPGDPVVTSLGAYPTFNYHVAGF-------------GGRLVTVPY--RD-DRED----LDALLDAAR---RENAPLV 159 (369)
T ss_pred c--CCCCEEEECCCcchHHHHHHHHc-------------CCeEEEeeC--CC-CCCC----HHHHHHHhc---ccCCcEE
Confidence 3 25678889999997665433222 222222221 11 1122 344443332 1233444
Q ss_pred -EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcccc
Q 013235 259 -LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLG 333 (447)
Q Consensus 259 -i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig 333 (447)
+++|.++ +|.+. +.+.+++|.++|++ +++||+||+|..|++.| ....+. ...|+++ +|||.+| .|+|+|
T Consensus 160 ~l~~P~NP-tG~~~-~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~-~~~~~~--~~~~~~i~~~SfSK~~g~~GlRiG 233 (369)
T PRK08153 160 YLANPDNP-MGSWH-PAADIVAFIEALPE-TTLLVLDEAYCETAPAG-AAPPID--TDDPNVIRMRTFSKAYGLAGARVG 233 (369)
T ss_pred EEeCCCCC-CCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhhcCcc-cchhhh--hcCCCEEEEecchHhccCcchhee
Confidence 5577544 46655 56667777777764 99999999999987655 232221 1235544 6999998 899999
Q ss_pred ccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEE
Q 013235 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (447)
Q Consensus 334 av~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gi 413 (447)
|+++++++++.+.... .+|+.|+++++++.+.|+ ++++.++.++..+..++.+.+..+++++ ..++..|.++.+
T Consensus 234 ~~v~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~ 307 (369)
T PRK08153 234 YAIGAPGTIKAFDKVR--NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAI 307 (369)
T ss_pred eeecCHHHHHHHHHhh--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEE
Confidence 9999999998876432 457889999999998885 4556666777677777777666665553 234567888877
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++..+ ...+.++.++|+++||+++
T Consensus 308 ~~~~~-------~~~a~~l~~~l~~~Gi~v~ 331 (369)
T PRK08153 308 DCGRD-------GAFARAVLDGLIARDIFVR 331 (369)
T ss_pred ECCCC-------cccHHHHHHHHHHCCeEEe
Confidence 76311 1235679999999999995
No 113
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.87 E-value=5.4e-20 Score=183.84 Aligned_cols=297 Identities=19% Similarity=0.216 Sum_probs=194.4
Q ss_pred CeEEEecCCcccccCCCC-CHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHC-HPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANE 172 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~-~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e 172 (447)
+.||.|+++. .|||. ||+|.+|+++.+++..+... ....+...++.+.|+++++. +..++++||++++.
T Consensus 1 ~~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~iv~~sg~~a~~ 75 (349)
T cd06454 1 KKVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK--EAALVFSSGYAAND 75 (349)
T ss_pred CCceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC--CCEEEeccHHHHHH
Confidence 4688888654 68998 99999999999987543111 13467778999999999864 34677899999999
Q ss_pred HHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC-
Q 013235 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT- 251 (447)
Q Consensus 173 ~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~- 251 (447)
.+++... .+++.|++.++. |.......... |+.....+. .| .+++++++....
T Consensus 76 ~~~~~~~--~~gd~Vl~~~~~-~~~~~~~~~~~------------g~~~~~~~~-------~~----~~~le~~i~~~~~ 129 (349)
T cd06454 76 GVLSTLA--GKGDLIISDSLN-HASIIDGIRLS------------GAKKRIFKH-------ND----MEDLEKLLREARR 129 (349)
T ss_pred HHHHHhc--CCCCEEEEehhh-hHHHHHHHHHc------------CCceEEecC-------CC----HHHHHHHHHHhhc
Confidence 8886543 245667766554 44433222211 222222221 13 356677765421
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccC---CCCCEE--Eeeccc
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG---VVPDIV--TMAKGI 326 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~g---v~pDiv--t~sK~l 326 (447)
+.++++++++++++++|...+ +++|.++|+++|+++|+||+|. +|..+.........+ ..+|++ +++|.+
T Consensus 130 ~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 204 (349)
T cd06454 130 PYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAF 204 (349)
T ss_pred cCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcEEEeechhhh
Confidence 246789999999999998765 8999999999999999999985 333321101111111 235766 588999
Q ss_pred cCCccccccccCHHHHHhhcCCc--ccccCCCChHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 013235 327 GNGIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (447)
Q Consensus 327 g~G~pigav~~~~~i~~~l~~~~--~~~T~~~np~a~aaala~L~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 403 (447)
+. +.|+++.++++++.+.... +..+...++..++++.++|+.+++ ++..+++.++.+++.+.|.++ .+..+
T Consensus 205 ~~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~-- 278 (349)
T cd06454 205 GA--VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL--GFPVG-- 278 (349)
T ss_pred cc--cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCccc--
Confidence 75 4478889999887765432 223345778889899999988765 566788888888888888765 22222
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
...+.++...+.. +.....++.+.|+++||.+..
T Consensus 279 -~~~~~~~~~~~~~-------~~~~~~~~~~~L~~~gI~~~~ 312 (349)
T cd06454 279 -GSPSHIIPPLIGD-------DPAKAVAFSDALLERGIYVQA 312 (349)
T ss_pred -CCCCCcEEEEeCC-------ChHHHHHHHHHHHhCCceEEE
Confidence 1223332222221 112356789999999998853
No 114
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=6e-20 Score=186.03 Aligned_cols=307 Identities=11% Similarity=0.125 Sum_probs=188.4
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhc--ccccccccchHHHHHHHHHHHhCC--CCC-ceEEEcCCHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI--QHSTVLYLNHAIADFAEALASKMP--GNL-KVVFFTNSGTEANELA 174 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~--~~~~~~~~~~~~~elae~L~~~~~--~~~-~~v~~~~sGseA~e~A 174 (447)
..|+|..|... ++ .++.+.+++.+.++.. .+....+..+...++++.+.+.++ ... ++|++++++++|++.+
T Consensus 21 ~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGEPD--FV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 46888877663 44 4667888888877642 111112223344455555544322 223 3799999999999999
Q ss_pred HHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCC
Q 013235 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (447)
Q Consensus 175 ik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (447)
++... .+++.|++.+++|++....+...+ ...++.+......|+.| .+++++.+.. +
T Consensus 98 ~~~l~--~~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d----~~~l~~~~~~----~ 154 (378)
T PRK07682 98 MRAII--NPGDEVLIVEPSFVSYAPLVTLAG-------------GVPVPVATTLENEFKVQ----PAQIEAAITA----K 154 (378)
T ss_pred HHHhC--CCCCEEEEeCCCchhhHHHHHHcC-------------CEEEEeecCCccCCCCC----HHHHHhhcCc----c
Confidence 87553 356889999999986554333221 12222221111123334 5666665532 3
Q ss_pred eEEE-EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCC---EEEeecccc-C
Q 013235 255 VAGF-LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPD---IVTMAKGIG-N 328 (447)
Q Consensus 255 ~aav-i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pD---ivt~sK~lg-~ 328 (447)
+.++ ++.| ++++|.+. +++.+++|.++|++|++++|+||+|..|.+.+ ....+ ...+..+. +.+|||.++ .
T Consensus 155 ~~~v~~~~p-~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 231 (378)
T PRK07682 155 TKAILLCSP-NNPTGAVL-NKSELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMT 231 (378)
T ss_pred cEEEEEECC-CCCcCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccCh
Confidence 4445 5555 66777654 78889999999999999999999999987655 22222 22222223 336999998 7
Q ss_pred CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEee
Q 013235 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (447)
Q Consensus 329 G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg 406 (447)
|+|+|++++++++++.+.......+++.+++++.++.+.|+.-+. +++.+..++..+++.+.|+++ +.-...+.
T Consensus 232 GlR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~p~ 307 (378)
T PRK07682 232 GWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI----GLTCHVPG 307 (378)
T ss_pred hhhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC----CCccCCCC
Confidence 999999999999999886543345567788888888888853111 123344455555555555543 32111233
Q ss_pred cceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 407 ~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
.|+++++.+.... ....++++.|+ ++||++.++
T Consensus 308 g~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~pg 341 (378)
T PRK07682 308 GAFYAFPSISSTG-------LSSEEFAEQLLLEEKVAVVPG 341 (378)
T ss_pred eeEEEEEeccCCC-------CCHHHHHHHHHHhCCEEEcCc
Confidence 4566766663211 01356788876 689998753
No 115
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=3.1e-20 Score=186.72 Aligned_cols=296 Identities=18% Similarity=0.144 Sum_probs=190.5
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
+|..+|||..|.. .++ .+|.+.+++.+.++.. ..|+.....+|.+.++++++...++|++++++++++..+++
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~----~~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNEN--PHG-PSPAAVEAIREAAERV----HSYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCC--CCC-CCHHHHHHHHHHHhhh----hcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 4567999988766 456 6788999988776543 23555556789999999987777899999999999999887
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
... ..++.|++.+++|.......... + .++..++.+ ....|..+ .+++++... ++.
T Consensus 101 ~~~--~~gd~V~v~~P~y~~~~~~~~~~-g----------~~~~~~~l~--~~~~~~~~----~~~~~~~~~-----~~k 156 (357)
T PRK14809 101 AML--DPGDTVLVPDPGFAYYGMSARYH-H----------GEVREYPVS--KADDFEQT----ADTVLDAYD-----GER 156 (357)
T ss_pred Hhc--CCCCEEEEeCCChHHHHHHHHHc-C----------CeEEEEecc--cCcCCCcC----HHHHHHhhc-----CCc
Confidence 542 25678999999986443322111 1 122233321 11123223 233433321 223
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeecccc-CCcccccc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG-NGIPLGAV 335 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg-~G~pigav 335 (447)
++++...++++|.+. +.+.+++|.++|++ ++++|+||+|..|...++.....+..+-..-+-+|||.++ .|+|+||+
T Consensus 157 ~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 234 (357)
T PRK14809 157 IVYLTSPHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYA 234 (357)
T ss_pred EEEEeCCCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheee
Confidence 444445567777776 55667777777765 7899999999988654421111122222222347999998 79999999
Q ss_pred ccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEE
Q 013235 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415 (447)
Q Consensus 336 ~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel 415 (447)
++++++++.+... ..+++.|++++.++.+.|+ ++++.++.++.-+..++.+.+..+.. ..+..|+++++++
T Consensus 235 ~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~g~f~~~~~ 305 (357)
T PRK14809 235 VVPEEWADAYARV--NTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAP----TWESAGNFVLAEV 305 (357)
T ss_pred ecCHHHHHHHHHh--CCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCc----cCCCCCCEEEEEC
Confidence 9999999888643 2567888998888888774 34444444433333344444433222 1356789999887
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 416 VTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 416 ~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+ ..++.+.|.++||++.+
T Consensus 306 ~~-----------~~~~~~~l~~~gv~v~~ 324 (357)
T PRK14809 306 GD-----------ASAVAEAAQERGVIVRD 324 (357)
T ss_pred CC-----------HHHHHHHHHHCCEEEEE
Confidence 21 34678888999999875
No 116
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.86 E-value=1.2e-19 Score=182.15 Aligned_cols=297 Identities=15% Similarity=0.114 Sum_probs=190.8
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
..++||..|.. .+| .+|.+.+++.+.+..+ ..|+.+...+|.++++++++.+.++|++++++++++..+++..
T Consensus 19 ~~~~~l~~~~~--~~~-~p~~~~~a~~~~~~~~----~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANIN--PLG-VPESLKQAITENLDKL----VEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCCC--CCC-CCHHHHHHHHHHHHhh----hcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 35799987664 456 4789999998876543 2356556778999999998777889999999999999998753
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
..+.|++.+++|+.....+... |...+..|......|..| + ++.+.+. .+....+
T Consensus 92 ----~~~~v~i~~P~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d-~----~~~~~~~---~~~~~v~ 146 (354)
T PRK06358 92 ----KPKKVLILAPTFAEYERALKAF-------------DAEIEYAELTEETNFAAN-E----IVLEEIK---EEIDLVF 146 (354)
T ss_pred ----CCCcEEEecCChHHHHHHHHHc-------------CCeeEEEeCccccCCCcc-H----HHHHhhc---cCCCEEE
Confidence 2357999999998665444222 222222222111122233 1 2222222 1223345
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGA 334 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~piga 334 (447)
++.| ++++|.+. +.+.+++|.++|++||+++|+||+|..|...+...-.....+..+.++ +|||.++ .|+|+||
T Consensus 147 ~~~P-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~ 224 (354)
T PRK06358 147 LCNP-NNPTGQLI-SKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGY 224 (354)
T ss_pred EeCC-CCCCCCcc-CHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhhee
Confidence 7788 56667654 788899999999999999999999998865442111112222234444 6999999 8999999
Q ss_pred cccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEE
Q 013235 335 VVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (447)
Q Consensus 335 v~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gi 413 (447)
++++ +++++.+.... ..|+.+.++..++.+.|+ ++++.++..+.-+.-++.+.+..++++.+.-.+..|.++++
T Consensus 225 lv~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~ 299 (354)
T PRK06358 225 GLTSNKNLAEKLLQMR--EPWSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFF 299 (354)
T ss_pred eecCCHHHHHHHHHhC--CCCcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEE
Confidence 9984 67777775432 357778888888888774 23332222222222233333333333333334566778888
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+ ..++.+.|+++||++.+
T Consensus 300 ~~~~-----------~~~~~~~l~~~gI~v~~ 320 (354)
T PRK06358 300 KLEK-----------PIDLRKELLKKGILIRS 320 (354)
T ss_pred EcCc-----------hHHHHHHHHHCCeEEEE
Confidence 7731 14688999999999875
No 117
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.86 E-value=2e-19 Score=182.26 Aligned_cols=307 Identities=16% Similarity=0.126 Sum_probs=190.3
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcc--cccccccchHHHHHHHHHHHhCC--CCCceEEEcCCHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMP--GNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~elae~L~~~~~--~~~~~v~~~~sGseA~e~Ai 175 (447)
..|||..|... ++ .++.+.+++.+.+.... +....+..+....+++.+.+.++ ...+++++++|+++|+..++
T Consensus 25 ~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESD--LP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 46898887764 34 46899999888776531 11111223444555555555444 45678999999999999998
Q ss_pred HHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCc-CCCCCCChHHHHHHHHHHHHccCCCC
Q 013235 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPY-RGVFGADGEMYAKDVQDLIDFGTSGH 254 (447)
Q Consensus 176 k~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~-~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (447)
+.... .++.|++.+++|......+... |+..+..|... ...|..| .+++++.+. + +
T Consensus 102 ~~l~~--~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~d----~~~l~~~~~---~-~ 158 (382)
T PRK06108 102 QALVG--PGDEVVAVTPLWPNLVAAPKIL-------------GARVVCVPLDFGGGGWTLD----LDRLLAAIT---P-R 158 (382)
T ss_pred HHhcC--CCCEEEEeCCCccchHHHHHHC-------------CCEEEEeeCCCCCCCccCC----HHHHHHhcC---c-c
Confidence 85532 5678999999986554332211 33333322211 1123234 456666553 2 3
Q ss_pred eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcccc-CCCcccc-cccCCCCCEE---Eeecccc-C
Q 013235 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART-GSHFWGF-EAHGVVPDIV---TMAKGIG-N 328 (447)
Q Consensus 255 ~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~-G~~~~~~-~~~gv~pDiv---t~sK~lg-~ 328 (447)
+.++++...++++|.+. +.+.+++|.++|+++|+++|+||+|.+|... +.....+ +..+..+.++ +|||.++ .
T Consensus 159 ~~~i~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (382)
T PRK06108 159 TRALFINSPNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMT 237 (382)
T ss_pred ceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCc
Confidence 45555555567778765 7889999999999999999999999988543 2111111 1111122233 6999997 6
Q ss_pred CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEee
Q 013235 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (447)
Q Consensus 329 G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg 406 (447)
|+|+|++++++++++.+.......+++.+++.+.++.+.|+.-++ +++.+++++..+++.+.|+++ +.+..+..
T Consensus 238 G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p 313 (382)
T PRK06108 238 GWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRAL----PGVEVAKP 313 (382)
T ss_pred ccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC----CCCcccCC
Confidence 999999999999988876543345667788988888888853211 233444555555555555443 22222333
Q ss_pred -cceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 407 -RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 407 -~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
.|+++++++... ....++++.|+ ++||++.+
T Consensus 314 ~~g~~~~~~l~~~--------~~~~~~~~~ll~~~gV~v~p 346 (382)
T PRK06108 314 DGAMYAFFRIPGV--------TDSLALAKRLVDEAGLGLAP 346 (382)
T ss_pred CeeEEEEEeCCCC--------CCHHHHHHHHHHhCCEEEeC
Confidence 366777777321 01356888875 57999864
No 118
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.86 E-value=8.8e-20 Score=186.20 Aligned_cols=308 Identities=16% Similarity=0.125 Sum_probs=188.0
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhC------CCCC-ceEEEcCCHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM------PGNL-KVVFFTNSGTEA 170 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~------~~~~-~~v~~~~sGseA 170 (447)
|..+|||..|.. .++ .++.+.+++.+.+..... ..|+.....+|.+.|++++ +.+. ++|++++++++|
T Consensus 31 ~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~--~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 105 (399)
T PRK07681 31 GHKMIDLSIGNP--DMP-PADFVREEMVHTANQKES--YGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcccc--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence 567899988765 344 468888888876654211 1122233444555555443 2344 689999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..+++... ..++.|++.+++|.+....+... |+..+++|....+.|..| .+++++.+.
T Consensus 106 l~~~~~~~~--~~Gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~~~~~~~~d----~~~l~~~~~-- 164 (399)
T PRK07681 106 LVHLPMVYA--NPGDIILVPDPGYTAYETGIQMA-------------GATSYYMPLKKENDFLPD----LELIPEEIA-- 164 (399)
T ss_pred HHHHHHHhC--CCCCEEEECCCCccchHHHHHhc-------------CCEEEEEecCCCCCCcCC----HHHHHHhcc--
Confidence 999887543 25678999999997766544322 333333333222223334 455555443
Q ss_pred CCCCeEEEEEc-cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCC---CCCEEEeecc
Q 013235 251 TSGHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGV---VPDIVTMAKG 325 (447)
Q Consensus 251 ~~~~~aavi~E-pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv---~pDivt~sK~ 325 (447)
+ ++.++++. | ++++|.+. +++-+++|.++|++||+++|+||+|..|-..+...-.+ +..+. ...+-+|||.
T Consensus 165 -~-~~k~v~l~~P-~NPTG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 240 (399)
T PRK07681 165 -D-KAKMMILNFP-GNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKS 240 (399)
T ss_pred -c-cceEEEEeCC-CCCcCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccc
Confidence 2 34445544 7 56677665 78889999999999999999999999885443111111 11111 1123379999
Q ss_pred cc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE
Q 013235 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (447)
Q Consensus 326 lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 404 (447)
++ .|+++||+++++++++.+.......+++.+.+++.++.+.|+.- +++.++.++.-+.-++.|.+..+++++....
T Consensus 241 ~~~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 318 (399)
T PRK07681 241 YSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG--AAFCEKNRGIYQERRDTLVDGFRTFGWNVDK 318 (399)
T ss_pred cCCccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 98 89999999999999988865433456777888888887777521 2233222222222223333333333321112
Q ss_pred eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh-CCceeec
Q 013235 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG-ICALFFS 445 (447)
Q Consensus 405 rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~-~Gvlv~~ 445 (447)
+..|+++++++.+. ....++++.|++ +||++.+
T Consensus 319 p~~g~f~~~~l~~~--------~~~~~~~~~l~~~~gv~v~p 352 (399)
T PRK07681 319 PAGSMFVWAEIPKG--------WTSLSFAYALMDRANVVVTP 352 (399)
T ss_pred CCeeeEEEEECCCC--------CCHHHHHHHHHHhCCEEEeC
Confidence 34588999887421 113568888887 8999875
No 119
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=3.2e-19 Score=180.76 Aligned_cols=306 Identities=17% Similarity=0.156 Sum_probs=194.9
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHH----hCC--CCC-ceEEEcCCHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALAS----KMP--GNL-KVVFFTNSGTEAN 171 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~----~~~--~~~-~~v~~~~sGseA~ 171 (447)
...||+..|.... ..++.+.+++.+++..... ..+++....+|++.+++ ..+ ... +.|+.+++++||+
T Consensus 28 ~~vi~l~iG~Pd~---~~p~~i~~a~~~a~~~~~~--~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPDF---PTPEHIIEAAIEALEEGGT--HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCCC---CCCHHHHHHHHHHHhcccC--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 4688887776533 2678899999999887631 12234444555555554 433 123 3499999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcC-CCCCCChHHHHHHHHHHHHcc
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYR-GVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~-~~~~~d~~~~~~~le~~i~~~ 250 (447)
..++..... ++++||+.+++|-.+.......++ ..+..|.... ..|.-| .++|++.+..
T Consensus 103 ~~~~~a~~~--pGDeVlip~P~Y~~y~~~~~~~gg-------------~~v~v~l~~~~~~f~~d----~~~l~~~i~~- 162 (393)
T COG0436 103 FLAFLALLN--PGDEVLIPDPGYPSYEAAVKLAGG-------------KPVPVPLDEEENGFKPD----LEDLEAAITP- 162 (393)
T ss_pred HHHHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCC-------------EEEEEeCCcCccCCcCC----HHHHHhhcCc-
Confidence 999975443 678899999999766655444332 2222221111 244445 5677777653
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC-CcccccccCC---CCCEEEeeccc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS-HFWGFEAHGV---VPDIVTMAKGI 326 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~-~~~~~~~~gv---~pDivt~sK~l 326 (447)
++.++++..-++++|.+ +++++|++|.++|++||+++|.||+|.+|...|. +....+..+. ..-+-.|||.+
T Consensus 163 ---ktk~i~ln~P~NPTGav-~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~ 238 (393)
T COG0436 163 ---KTKAIILNSPNNPTGAV-YSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTY 238 (393)
T ss_pred ---cceEEEEeCCCCCcCcC-CCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccc
Confidence 44455554444445554 4899999999999999999999999999988873 1111222221 11222589999
Q ss_pred c-CCccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcCC
Q 013235 327 G-NGIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYGI 400 (447)
Q Consensus 327 g-~G~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~ 400 (447)
+ .|||+||++++ +++++.+.......+++.+.+++.++.++|+.-++.+.. +..+++.+.+.+.|.++ +.
T Consensus 239 ~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~----~g 314 (393)
T COG0436 239 GMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI----GG 314 (393)
T ss_pred cccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence 9 79999999999 888887765445567788999999999999743211122 33444445555544443 32
Q ss_pred eeeEe-e-cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-Cceeec
Q 013235 401 IGDVR-G-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-CALFFS 445 (447)
Q Consensus 401 i~~vr-g-~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~ 445 (447)
+..+. . .++++.+.+... ....+++.+|+++ ||.+.+
T Consensus 315 ~~~~~~p~Ga~Y~~~~i~~~--------~d~~~f~~~Ll~~~gV~v~P 354 (393)
T COG0436 315 LSVVKPPEGAFYLFPKIPEL--------LDSEEFAKKLLEEAGVAVVP 354 (393)
T ss_pred eeeccCCCeeEEEEeecCCC--------CCHHHHHHHHHHhCCEEEec
Confidence 33333 3 345555555321 1135688888765 798865
No 120
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.85 E-value=3.2e-19 Score=181.42 Aligned_cols=313 Identities=12% Similarity=0.046 Sum_probs=185.0
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC----C--CCCc-eEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLK-VVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~----~--~~~~-~v~~~~sGs 168 (447)
+|+.++||..|.. .++ .++.+.+++.+.+.... ...|. .....+|.+.|++++ + .+.+ +|+++++++
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~ 102 (388)
T PRK07366 28 AGKELIDLSLGSS--DLP-APAHALEAIAQSLHDPS--THGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQ 102 (388)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcc--cCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcH
Confidence 4667889888765 345 47899999988765321 12232 233455666666554 2 3445 699999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+|+..+++... .+++.|++.+++|.+....+... |...++.|....+.|..| ++++++.+.
T Consensus 103 ~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~ 163 (388)
T PRK07366 103 EGTAHLPLAVL--NPGDFALLLDPGYPSHAGGVYLA-------------GGQIYPMPLRAENDFLPV----FADIPTEVL 163 (388)
T ss_pred HHHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhc-------------CCEEEEEECCCccCCCCC----HHHHHHhhc
Confidence 99999887543 25688999999998776544432 233333322212223223 344444332
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC-cccccccCCC-CCEE---Eee
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWGFEAHGVV-PDIV---TMA 323 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~-~~~~~~~gv~-pDiv---t~s 323 (447)
+ ++.++++.+.++++|.+. +.+.+++|.++|++||++||.||+|..|...+.. ...+...+-. +.++ +||
T Consensus 164 ---~-~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 238 (388)
T PRK07366 164 ---A-QARLMVLSYPHNPTTAIA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLS 238 (388)
T ss_pred ---c-cceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecc
Confidence 2 234455555567777765 7888999999999999999999999988544421 1111111111 2222 799
Q ss_pred cccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 324 KGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 324 K~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
|.+| .|+++||+++++++++.+........++..+..+.++++.|. +++++.++.++.-+.-++.+.+..++++...
T Consensus 239 K~~g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~--~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~ 316 (388)
T PRK07366 239 KSYNMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALT--GPQATVQQTVQIFRQRRDAFINALHQIGWPV 316 (388)
T ss_pred cccCCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 9997 899999999999999887653322233332333445555553 2233333333222222333333333444322
Q ss_pred eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHH-HhCCceeecc
Q 013235 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KGICALFFSQ 446 (447)
Q Consensus 403 ~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l-~~~Gvlv~~~ 446 (447)
..+..|+++++++.+.-. . ...++++.| .++||++.+.
T Consensus 317 ~~p~~g~f~~~~~~~~~~---~---~~~~~~~~l~~~~gv~v~pg 355 (388)
T PRK07366 317 PLPEATMYVWAKLPEPWQ---G---NSVEFCTQLVAQTGVAASPG 355 (388)
T ss_pred cCCCeeEEEEEECCcccC---C---CHHHHHHHHHHhCCEEEeCc
Confidence 345678999998842100 0 134577777 4679998753
No 121
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.85 E-value=2.5e-19 Score=182.58 Aligned_cols=301 Identities=13% Similarity=0.076 Sum_probs=189.9
Q ss_pred CCcccccCCCCCHHHHHHHHHHHHhc--cccc-----ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 106 GGIATVCCGHCHPYVVDSIVNQIKRI--QHST-----VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 106 ~g~~~~~lGh~~p~v~~A~~~~l~~~--~~~~-----~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
.+.+....||+||.+++++.++. .. .++. ..+..+...+++++|++.++.+.+.++++++|+++.+.+++.+
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 44455577999999999987776 32 1111 1122345678888898888655556778888888888888877
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
+...++.+.|++...+|+.+..++...+... ...+..++.++. +..| .+++++.+. +++++|
T Consensus 102 ~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~------g~~~~~v~~~~~----~~~d----~~~l~~~i~----~~t~~v 163 (398)
T cd00613 102 IRAYHKRNKVLVPDSAHPTNPAVARTRGEPL------GIEVVEVPSDEG----GTVD----LEALKEEVS----EEVAAL 163 (398)
T ss_pred HhcccCCCEEEEcCccCcchHHHHHHhcccC------CcEEEEeccCCC----CCcC----HHHHHHhcC----CCeEEE
Confidence 7644334555567779999888776654211 012233332211 1123 466766653 368889
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccc---cC-Cccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGI---GN-GIPL 332 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~l---g~-G~pi 332 (447)
++++.+ ++|.+ .+++++|+++|++||+++|+|++|......+ . ...+ .+|+++ ++|.+ |+ |...
T Consensus 164 iv~~~~-~~G~~---~~~l~~i~~la~~~g~~livD~~~~~~~~~~-~---~~~~--~~d~~~~s~~K~~~p~g~Ggp~~ 233 (398)
T cd00613 164 MVQYPN-TLGVF---EDLIKEIADIAHSAGALVYVDGDNLNLTGLK-P---PGEY--GADIVVGNLQKTGVPHGGGGPGA 233 (398)
T ss_pred EEECCC-CCcee---cchHHHHHHHHHhcCCEEEEEeccccccCCC-C---hHHc--CCCEEEeeccccCCCCCCCCCce
Confidence 998865 66877 3568999999999999999999885321111 0 1112 479886 44655 43 4668
Q ss_pred cccccCHHHHHhhcCC-----------------------------cccccCCCChHHHHHHHHHHHHHhhhh---HHHHH
Q 013235 333 GAVVTTPEIAEVLTRR-----------------------------NYFNTFGGNPVCTAAGHAVLKVIQKDK---LQNNA 380 (447)
Q Consensus 333 gav~~~~~i~~~l~~~-----------------------------~~~~T~~~np~a~aaala~L~~i~~~~---l~~~~ 380 (447)
|+++.++++++.+... ...++++++++.++++.++++.+.+++ +.++.
T Consensus 234 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~ 313 (398)
T cd00613 234 GFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERA 313 (398)
T ss_pred eEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8888888888765221 113467788888888888888776544 45788
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 381 HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 381 ~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++++++++++|+++.... .....+. ..+.+.+.. +......++++.|+++||++.
T Consensus 314 ~~~~~~l~~~L~~~~~~~-~~~~~~~--~~v~~~~~~------~~~~~~~~~~~~L~~~gi~~~ 368 (398)
T cd00613 314 HLNANYLAKRLKEVGGVL-PFNGPFF--HEFVLRLPP------LYGIRAEDLAKALIDGGFHAP 368 (398)
T ss_pred HHHHHHHHHHHHhcCCcc-cCCCCee--EEEEEEcCC------cchHHHHHHHHhhhhcCcccc
Confidence 889999999888763211 1111111 112333311 001235678999999998874
No 122
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=1.8e-19 Score=181.23 Aligned_cols=294 Identities=13% Similarity=0.088 Sum_probs=188.0
Q ss_pred cCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEE-cCCHHHHHHHH
Q 013235 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFF-TNSGTEANELA 174 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~-~~sGseA~e~A 174 (447)
.+++.+|||..|.. .+| .+|.+.+++.+.+... ..|+.+...++.+.++++++...+++++ +++.++++..+
T Consensus 31 ~~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 31 IDPESIIKLGSNEN--PLG-PSPKAVEAIEKELSKI----HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CCccceEEccCCCC--CCC-CCHHHHHHHHHHHHhh----cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHH
Confidence 46678999988765 566 6789999998877653 2345555588999999998766677888 67778888888
Q ss_pred HHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCC
Q 013235 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (447)
Q Consensus 175 ik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (447)
++... .+++.|++.+++|......+... |+..+..|. ...|+.| .+++++.+. + +
T Consensus 104 ~~~~~--~~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~--~~~~~~~----~~~l~~~~~---~-~ 158 (361)
T PRK00950 104 MRTFI--DPGDEVIIPTPTFSYYEISAKAH-------------GAKPVYAKR--EEDFSLD----VDSVLNAIT---E-K 158 (361)
T ss_pred HHHhc--CCCCEEEEcCCChHHHHHHHHHc-------------CCEEEEeec--CCCCCcC----HHHHHHHhc---c-C
Confidence 87542 35577888898886543322211 222222221 1123334 456666553 2 3
Q ss_pred eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEEEeecccc-CCccc
Q 013235 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIVTMAKGIG-NGIPL 332 (447)
Q Consensus 255 ~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDivt~sK~lg-~G~pi 332 (447)
+.++++...++++|.+.+ .+++.++|+++|+++|+||+|.+|. .+ ..... ..++-.--+-+|||.+| .|+|+
T Consensus 159 ~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~-~~~~~~~~~~~vi~~~S~SK~~g~~GlRi 232 (361)
T PRK00950 159 TKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EY-DYTPLALEYDNLIIGRTFSKVFGLAGLRI 232 (361)
T ss_pred CCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-cc-chHHHHHhcCCEEEEEeehHhhcCchhhc
Confidence 334444344667777776 7789999999999999999998874 22 12111 11111112237999998 79999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEE
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~g 412 (447)
|++++++++++.+... ..+++.++++++++.++|+ +.++.++..+..+..++.|.+. .. +...+..|.+++
T Consensus 233 G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~---l~-~~~~~~~~~~i~ 303 (361)
T PRK00950 233 GYGFVPEWLIDYYMRA--KTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNE---LP-FKVYPSEANFVL 303 (361)
T ss_pred chhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhh---cC-eeECCCcceEEE
Confidence 9999999998877642 2456677888888877774 3344444444334444444332 22 222345678888
Q ss_pred EEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 413 VEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 413 iel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++. .. ...++++.|.++||++.+
T Consensus 304 ~~~~-~~--------~~~~~~~~l~~~gv~v~~ 327 (361)
T PRK00950 304 VDVT-PM--------TAKEFCEELLKRGVIVRD 327 (361)
T ss_pred EECC-CC--------CHHHHHHHHHHCCEEEee
Confidence 8872 10 145788899999999864
No 123
>PRK07324 transaminase; Validated
Probab=99.85 E-value=1.1e-19 Score=183.76 Aligned_cols=311 Identities=14% Similarity=0.087 Sum_probs=194.0
Q ss_pred EecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhCC-CCCceEEEcCCHHHHH
Q 013235 94 FDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKMP-GNLKVVFFTNSGTEAN 171 (447)
Q Consensus 94 ~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~~-~~~~~v~~~~sGseA~ 171 (447)
++..|...+++..|-.. +. .++.+ +|+.+++..... .|. .....+|.+.+++++. .+.++|++++++++|+
T Consensus 21 ~~~~~~~~~~~~~~e~~--~~-~~~~~-~~~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al 93 (373)
T PRK07324 21 YDIAESCIDSLTLEELL--AL-AGKNP-EAFYQELGQKKL---TYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGAN 93 (373)
T ss_pred cccccCCCCCCcHHHHH--hc-cCcch-HHHHHHHhcCCc---cCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHH
Confidence 45566666676555432 22 45566 777777765321 222 3345688888888764 3457899999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
..++.... ..++.|++..++|.......... |+..+..|......|..| .+++++.+.
T Consensus 94 ~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d----~~~l~~~~~--- 151 (373)
T PRK07324 94 FLVLYALV--EPGDHVISVYPTYQQLYDIPESL-------------GAEVDYWQLKEENGWLPD----LDELRRLVR--- 151 (373)
T ss_pred HHHHHHhC--CCCCEEEEcCCCchhHHHHHHHc-------------CCEEEEEecccccCCCCC----HHHHHHhCC---
Confidence 99987553 35678999999986654332222 222222222211223233 456665543
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEEEeecccc-CC
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIVTMAKGIG-NG 329 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDivt~sK~lg-~G 329 (447)
+ ++.++++...++++|.+. +++.+++|.++|++||+++|+||+|.++...+ ..... +..+....+-+|||.++ .|
T Consensus 152 ~-~~kli~i~~p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~-~~~s~~~~~~~~I~~~s~SK~~~~~G 228 (373)
T PRK07324 152 P-NTKLICINNANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG-STPSIADLYEKGISTNSMSKTYSLPG 228 (373)
T ss_pred C-CCcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCC-CCCChhhccCCEEEEecchhhcCCcc
Confidence 2 344566555566677655 78889999999999999999999999886654 22221 11111112336999999 79
Q ss_pred ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecc-
Q 013235 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRG- 408 (447)
Q Consensus 330 ~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G- 408 (447)
+|+|++++++++++.+.......+++.++++..++..+|+. .+.+.++.++.-+.-++.|.+..++++.+..++..|
T Consensus 229 ~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~--~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg 306 (373)
T PRK07324 229 IRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEH--RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAV 306 (373)
T ss_pred ceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCce
Confidence 99999999999998887655566788888888888887752 233444444333333344444444444444455444
Q ss_pred eeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 409 l~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
.+..+.+..+. ...+++++|+ +.||++.++
T Consensus 307 ~~~~i~~~~~~--------~~~~~~~~ll~~~gv~v~pg 337 (373)
T PRK07324 307 STSFVKLDVDM--------PSEDFCLKLLKETGVLLVPG 337 (373)
T ss_pred EEEEEEeCCCC--------CHHHHHHHHHHhcCEEEECc
Confidence 45556653210 1356788875 679998754
No 124
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.85 E-value=6.6e-19 Score=180.07 Aligned_cols=312 Identities=12% Similarity=0.058 Sum_probs=190.0
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc---cccccccchHHHHHHHHHHHhCC--CCC-ceEEEcCCHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMP--GNL-KVVFFTNSGTEAN 171 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~---~~~~~~~~~~~~elae~L~~~~~--~~~-~~v~~~~sGseA~ 171 (447)
++..+||..|... +++ .+|.+.+++.+.+.... +....+..+....+++.+.+..+ ... ++|++++++++|+
T Consensus 38 ~~~~i~l~~g~~~-~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al 115 (405)
T PRK06207 38 PGRPVDFSHGDVD-AHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGAL 115 (405)
T ss_pred CCCceecCCcCCC-CCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 3456688766553 334 56889998888776531 11112223345566666666544 234 6899999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCC---cCCCCCCChHHHHHHHHHHHH
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP---YRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~---~~~~~~~d~~~~~~~le~~i~ 248 (447)
..+++... ..++.|++.+++|.+....+... |...++.|.. ....|+.| .++|++.+.
T Consensus 116 ~~~~~~l~--~~Gd~Vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~~~~d----~~~l~~~~~ 176 (405)
T PRK06207 116 FLAVAATV--ARGDKVAIVQPDYFANRKLVEFF-------------EGEMVPVQLDYLSADKRAGLD----LDQLEEAFK 176 (405)
T ss_pred HHHHHHhc--CCCCEEEEeCCCchhHHHHHHHc-------------CCEEEEEeccccCcccCCCcC----HHHHHHhhh
Confidence 99988543 35688999999998765443322 2222222211 11123344 566776664
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC-EE---Eeec
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD-IV---TMAK 324 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD-iv---t~sK 324 (447)
. +..+.+++.| ++++|.+. +.+.+++|.++|++||+++|+||+|..|...|...-.+..+...+| ++ +|||
T Consensus 177 ~---~~k~v~l~~P-~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 251 (405)
T PRK06207 177 A---GVRVFLFSNP-NNPAGVVY-SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSK 251 (405)
T ss_pred h---cCeEEEECCC-CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchh
Confidence 3 2234566667 56667665 6888999999999999999999999988655521111111222233 33 5899
Q ss_pred ccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKL-QNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 325 ~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l-~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
.++ .|+++||+++++++++.+.......+.+.+.+++.++.+.|+. .+++ .++.+.. ...++.+.+..++++.+.
T Consensus 252 ~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~-~~~r~~l~~~L~~~~~~~ 328 (405)
T PRK06207 252 TESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE--PDGWMKDRIARH-QAIRDDLLRVLRGVEGVF 328 (405)
T ss_pred hccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC--cHHHHHHHHHHH-HHHHHHHHHHHhcCCCce
Confidence 999 8999999999999988886533334455566777777766642 1122 2222222 222344444333443232
Q ss_pred eE-eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 403 DV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 403 ~v-rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
-. +..|+++++++.... ....++++.|+ ++||++.+
T Consensus 329 ~~~p~gg~fl~~~l~~~~-------~~~~~~~~~l~~~~gV~v~p 366 (405)
T PRK06207 329 VRAPQAGSYLFPRLPRLA-------VSLHDFVKILRLQAGVIVTP 366 (405)
T ss_pred ecCCCeeEEEEEeCcccC-------CCHHHHHHHHHHhcCEEEeC
Confidence 22 345899999884210 01356888887 67999875
No 125
>PRK08960 hypothetical protein; Provisional
Probab=99.85 E-value=3.9e-19 Score=180.70 Aligned_cols=308 Identities=13% Similarity=0.072 Sum_probs=191.8
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhC------CCCCceEEEcCCHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM------PGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~------~~~~~~v~~~~sGseA~ 171 (447)
|..++|+..|... ++ .++.+.+++.+.+.... ....+.....++.+.+++++ +...++|++++++++|+
T Consensus 31 ~~~~i~l~~g~~~--~~-~~~~v~~a~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 105 (387)
T PRK08960 31 GHDVIHLEIGEPD--FT-TAEPIVAAGQAALAAGH--TRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGAL 105 (387)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhcCC--CccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHH
Confidence 4467888877763 33 47899999988776421 11112233445555555543 23567899999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
..++.... .+++.|++.+++|.+.......... .+..++. ...+.|..| .+++++.+.
T Consensus 106 ~~~~~~~~--~~gd~vlv~~p~y~~~~~~~~~~g~-----------~~~~v~~--~~~~~~~~d----~~~l~~~~~--- 163 (387)
T PRK08960 106 LLASSLLV--DPGKHWLLADPGYPCNRHFLRLVEG-----------AAQLVPV--GPDSRYQLT----PALVERHWN--- 163 (387)
T ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHHHHHhcCC-----------eEEEEec--CcccCCCCC----HHHHHHHhC---
Confidence 99987542 3568899999999876654432211 2223332 111223334 456666654
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG- 327 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg- 327 (447)
++....++..| ++++|.+. +.+.+++|.++|++||+++|+||+|.+|...+ ... ......++++ +|||.+|
T Consensus 164 ~~~~~i~i~~p-~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~-~~~--~~~~~~~~vi~~~S~SK~~g~ 238 (387)
T PRK08960 164 ADTVGALVASP-ANPTGTLL-SRDELAALSQALRARGGHLVVDEIYHGLTYGV-DAA--SVLEVDDDAFVLNSFSKYFGM 238 (387)
T ss_pred ccceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCC--ChhhccCCEEEEeecccccCC
Confidence 23456677777 45667665 68889999999999999999999998875433 221 1223446666 4899997
Q ss_pred CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee-eEee
Q 013235 328 NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRG 406 (447)
Q Consensus 328 ~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~vrg 406 (447)
.|+|+|++++++++++.+.......+.+.+.+++.++.+.|+. +.++..++.++.-+.-++.+.+..+++++.. ..+.
T Consensus 239 ~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (387)
T PRK08960 239 TGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ 317 (387)
T ss_pred cccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence 7999999999999988776533334566788888888887742 1112222222222222333333333444322 2355
Q ss_pred cceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 407 ~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
.|+++++++.+.. . ...++++.|+ ++||++.+
T Consensus 318 g~~f~~~~~~~~~----~---~~~~~~~~ll~~~gi~v~p 350 (387)
T PRK08960 318 GAFYLYADISAFG----G---DAFAFCRHFLETEHVAFTP 350 (387)
T ss_pred eeEEEEEeccccC----C---CHHHHHHHHHHhCCEEEcC
Confidence 5888899884310 1 1356777776 57999875
No 126
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=3e-19 Score=180.74 Aligned_cols=304 Identities=13% Similarity=0.053 Sum_probs=195.0
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCC--------CCCceEEEcCCHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP--------GNLKVVFFTNSGTEA 170 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~--------~~~~~v~~~~sGseA 170 (447)
..++|+..|.. +++ .+|.+.+++.+.++.... ...|+.....+|.+.|++++. .+.++|+++++++++
T Consensus 28 ~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 28 IQLDRLDTNEF--PYD-LPPDLKQKLAWLYQQGIE-SNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred cceeEecCCCC--CCC-CCHHHHHHHHHHHhhccc-ccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 46999988876 455 578999999887665311 123555566778888888765 345689999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..++... ...+.+.|++.+++|.+....+... |...+..|.. ...|+.| .+++++.+...
T Consensus 104 l~~~~~~~-~~~g~~~Vlv~~P~y~~~~~~~~~~-------------g~~~~~~~~~-~~~~~~d----~~~l~~~~~~~ 164 (374)
T PRK02610 104 IRSLLIAT-CLGGEGSILVAEPTFSMYGILAQTL-------------GIPVVRVGRD-PETFEID----LAAAQSAIEQT 164 (374)
T ss_pred HHHHHHHH-cCCCCCeEEEcCCChHHHHHHHHHc-------------CCEEEEecCC-cccCCCC----HHHHHHHHHhh
Confidence 98777533 2234347999999997666544332 2333333321 1124445 56677666532
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG 327 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg 327 (447)
...++.++++.+.++++|.+. +.+.+++|.++| +++++|+||+|..|.... .. ....-.++++ +|||.+|
T Consensus 165 ~~~~~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~-~~---~~~~~~~~~ivi~SfSK~~g 237 (374)
T PRK02610 165 QNPPVRVVFVVHPNSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQTT-LV---GELAQHPNWVILRTFSKAFR 237 (374)
T ss_pred cCCCceEEEEeCCCCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCccc-hH---HHHhcCCCEEEEEecchhcc
Confidence 113556665545578888776 566678888876 499999999998884221 11 1111123433 6999996
Q ss_pred -CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEee
Q 013235 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (447)
Q Consensus 328 -~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg 406 (447)
.|+|+||+++++++++.+.... ..++.|.+++.++.++|+.. +.+.+++++.-+. ++.+.+..++++.+...+.
T Consensus 238 ~~GlRiG~~v~~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~ 312 (374)
T PRK02610 238 LAAHRVGYAIGHPELIAVLEKVR--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLRVWPS 312 (374)
T ss_pred CcccceeeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCC
Confidence 7999999999999998886533 34667888888887777522 3344444444333 3444444344433333466
Q ss_pred cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 407 ~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.|+++++++... ....++++.|+++||+++.
T Consensus 313 ~g~f~~~~l~~~--------~~~~~~~~~l~~~gi~v~~ 343 (374)
T PRK02610 313 AANFLYLRLSQD--------AALAALHQALKAQGTLVRH 343 (374)
T ss_pred cceEEEEeCCCC--------CCHHHHHHHHHHCCEEEEe
Confidence 788988887421 1135688889999999863
No 127
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.84 E-value=3.9e-19 Score=178.72 Aligned_cols=295 Identities=14% Similarity=0.094 Sum_probs=187.9
Q ss_pred cCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHH
Q 013235 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Ai 175 (447)
.+++.++||..|.. ++| .+|.+.+|+.+.+... ..|+.....+|.+.+++++..+.++|++++++++++..++
T Consensus 17 ~~~~~~i~l~~~~~--~~~-~p~~~~~a~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~ 89 (356)
T PRK08056 17 ISPDQLLDFSANIN--PLG-MPVSLKRAIIDNLDCA----ERYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVV 89 (356)
T ss_pred CChhhEEEeccccC--CCC-CCHHHHHHHHHHHHhc----ccCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHH
Confidence 45678899987654 567 7789999998877653 2456556789999999998777788999999999999988
Q ss_pred HHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCe
Q 013235 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV 255 (447)
Q Consensus 176 k~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~ 255 (447)
+.. .++ ++++..++|......+... |+..+..|......|..| +++++.+. + ++
T Consensus 90 ~~l---~~g-~viv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~-----~~~~~~~~---~-~~ 143 (356)
T PRK08056 90 SGL---KPR-RAMIVTPGFAEYRRALQQV-------------GCEIRRYSLREADGWQLT-----DAILEALT---P-DL 143 (356)
T ss_pred HHh---CCC-CEEEeCCCcHHHHHHHHHc-------------CCeEEEEecccccCCCcc-----HHHHHhcc---C-CC
Confidence 754 233 5788888886544332221 333333332211122222 12323332 2 34
Q ss_pred EEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCc-ccccccCCCCCEE--Eeecccc-CCcc
Q 013235 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF-WGFEAHGVVPDIV--TMAKGIG-NGIP 331 (447)
Q Consensus 256 aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~-~~~~~~gv~pDiv--t~sK~lg-~G~p 331 (447)
.++++...++++|.+ .+.+.+++|.++|+++|+++|+||+|.+|...+... -.++.++ ..++ +|||.++ .|+|
T Consensus 144 k~v~l~~p~NPTG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~i~~~S~SK~~~~~G~R 220 (356)
T PRK08056 144 DCLFLCTPNNPTGLL-PERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNP--HLWVLRSLTKFYAIPGLR 220 (356)
T ss_pred CEEEEeCCcCCCCCC-CCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCC--CEEEEEechhhccCcchh
Confidence 444444346667764 578899999999999999999999999885433111 1112111 2233 6899999 8999
Q ss_pred cccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcCCeeeEee
Q 013235 332 LGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (447)
Q Consensus 332 igav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~i~~vrg 406 (447)
+|++++ ++++++.+... ...++.+.+++.++.+.|+ ++.+. +.+++..+++.+.|+ +++.+...+.
T Consensus 221 iG~~v~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~~ 291 (356)
T PRK08056 221 LGYLVNSDDAAVARMRRQ--QMPWSINAFAALAGEVILQ---DRAYQQATWQWLAEEGARFYQALC----ALPLLTVWPG 291 (356)
T ss_pred heeeecCCHHHHHHHHHh--CCCCchhHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHh----cCCCcEEcCC
Confidence 999998 46777766532 2456667777777777663 33333 333444444444443 3322333355
Q ss_pred cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 407 ~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.|.++++.+..+ ..++++.|+++||++++
T Consensus 292 ~~~~~~~~~~~~----------~~~~~~~l~~~gI~v~~ 320 (356)
T PRK08056 292 RANYLFLRCERP----------DIDLQRALLTQRILIRS 320 (356)
T ss_pred CCcEEEEEcCCC----------hHHHHHHHHHCCeEEEE
Confidence 688888876321 24688899999999875
No 128
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.84 E-value=6.9e-19 Score=177.17 Aligned_cols=298 Identities=15% Similarity=0.080 Sum_probs=188.4
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
...+||..|.. +++ .+|.+.+++.+.+... ..|+.+...+|.+.|++++..+.++|+++++++|++..+++..
T Consensus 22 ~~~i~l~~~~n--~~~-~~~~~~~a~~~~~~~~----~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASIN--PLG-PPESVIAAIQSALSAL----RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcCC--CCC-CCHHHHHHHHHHHHHh----hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 46899987655 466 6789999988777643 2355445568999999998777788999999999999888753
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
..++.|++.+++|.+....+... |...++.|....+.+..+ ..+++++.... ++....+
T Consensus 95 ---~~g~~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~ 153 (360)
T PRK07392 95 ---AQLRAVYLITPAFGDYRRALRAF-------------GATVKELPLPLDQPSPGL----TLRLQTLPPQL-TPNDGLL 153 (360)
T ss_pred ---CCCCeEEEECCCcHHHHHHHHHc-------------CCeEEEEecccccCCccc----ccCHHHHHHhc-cCCCEEE
Confidence 23468999999998776554432 222222222111111000 11233333222 2234456
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc-ccccCCCCCEE---Eeecccc-CCcccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIV---TMAKGIG-NGIPLG 333 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~-~~~~gv~pDiv---t~sK~lg-~G~pig 333 (447)
+.+| ++++|.+.. .++|.++++++++ +|+||+|..|...+ +.-. ....+..+.++ +|||.++ .|+|+|
T Consensus 154 l~nP-~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 226 (360)
T PRK07392 154 LNNP-HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLG 226 (360)
T ss_pred EeCC-CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchhee
Confidence 6666 666777765 6678889999985 66699999986555 2111 11122234444 6899999 999999
Q ss_pred ccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEE
Q 013235 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (447)
Q Consensus 334 av~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gi 413 (447)
++++++++++.+.... ..|+.|.+++.++.+.|+ +..+.++.++.-+.-++.|.+..++++.+.-..+.|.++.+
T Consensus 227 ~~v~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~ 301 (360)
T PRK07392 227 YAIAHPDRLQRWQQWR--DPWPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLV 301 (360)
T ss_pred eeeCCHHHHHHHHhhC--CCCCCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEE
Confidence 9999999988876432 457788999888888875 33444443333222333333333334333334567888887
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
++.. ...++++.++ +.||++.+.
T Consensus 302 ~~~~----------~~~~l~~~ll~~~gv~v~pg 325 (360)
T PRK07392 302 QSQG----------SALQLQEKLLQQHRILIRDC 325 (360)
T ss_pred EcCC----------CHHHHHHHHHhhCCEEEEeC
Confidence 7632 1356777764 679998753
No 129
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-18 Score=178.14 Aligned_cols=322 Identities=12% Similarity=0.051 Sum_probs=188.7
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhc---ccccccccchHHHHHHHHHHHhCC--CCCc-eEEEcCCHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI---QHSTVLYLNHAIADFAEALASKMP--GNLK-VVFFTNSGTEA 170 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~---~~~~~~~~~~~~~elae~L~~~~~--~~~~-~v~~~~sGseA 170 (447)
.|..++||..|... +..++.+.+++.+.+... .+....+.......+++.+.+..+ ...+ +|++++++++|
T Consensus 31 ~~~~~~~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPD---GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCC---CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 45678999876543 223566777777655431 111111222333445555544333 3345 69999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..+++... .+++.|++.+++|.+....+... |...++.|..+...|+.|.+.+.+.+++++...
T Consensus 108 l~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 172 (403)
T PRK08636 108 YVHLVQAIT--NPGDVAIVPDPAYPIHSQAFILA-------------GGNVHKMPLEYNEDFELDEDQFFENLEKALRES 172 (403)
T ss_pred HHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhc-------------CCEEEEEeccccccCccChhhhhhHHHHHHhhc
Confidence 999998543 35789999999998765544332 333333333222235556555556777777654
Q ss_pred CCCCeEEEEEc-cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCE----EEeecc
Q 013235 251 TSGHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI----VTMAKG 325 (447)
Q Consensus 251 ~~~~~aavi~E-pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDi----vt~sK~ 325 (447)
.+ ++.++++. | ++++|.+. +.+-+++|.++|++|++++|.||+|..|-..+..........-.+|. .+|||.
T Consensus 173 ~~-~~~~i~~~~P-~NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 249 (403)
T PRK08636 173 SP-KPKYVVVNFP-HNPTTATV-EKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKS 249 (403)
T ss_pred cC-CceEEEEeCC-CCCCCccC-CHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccc
Confidence 33 34444444 5 55666554 78889999999999999999999998875444211111111112332 258999
Q ss_pred cc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE
Q 013235 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (447)
Q Consensus 326 lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 404 (447)
+| .|+++|++++++++++.+........++.+.+.+.++..+++. .+++++++++.-+.-++.+.+...++++-...
T Consensus 250 ~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T PRK08636 250 YNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAGWELQK 327 (403)
T ss_pred cCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 96 8999999999999988776533333455666666666555531 12333333322222233333333333321122
Q ss_pred eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 405 rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
+..|+++++++.+.... ....+++++++ ++||++.+.
T Consensus 328 p~~g~~~~~~l~~~~~~-----~~~~~l~~~ll~~~gV~v~pg 365 (403)
T PRK08636 328 PRASMFVWAKIPEPARH-----LGSLEFSKQLLTEAKVAVSPG 365 (403)
T ss_pred CCcceEEEEECCCccCC-----CCHHHHHHHHHHhCCEEEecc
Confidence 45689999988421100 01356777655 689998653
No 130
>PRK09148 aminotransferase; Validated
Probab=99.84 E-value=6.4e-19 Score=180.19 Aligned_cols=310 Identities=15% Similarity=0.051 Sum_probs=188.7
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhC----C--CCCc-eEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKM----P--GNLK-VVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~----~--~~~~-~v~~~~sGs 168 (447)
.|+.+|||..|.. .++ .++.+.+++.+.++.. ....|+.. ...+|.+.+++++ + ...+ +|+++++++
T Consensus 28 ~~~~~i~l~~~~p--~~~-~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~ 102 (405)
T PRK09148 28 AGADIIDLGMGNP--DLP-TPQHIVDKLCETAQDP--RTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSK 102 (405)
T ss_pred cCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHcCc--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChH
Confidence 5677899987654 344 3678888887766431 11234322 3445555555543 2 2344 799999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+++..+++... ..++.|++.+++|.+....+... |+..++.|....+.| .+++++.+.
T Consensus 103 ~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~-------~~~l~~~~~ 160 (405)
T PRK09148 103 EGFANMAQAIT--APGDVILCPNPSYPIHAFGFIMA-------------GGVIRSVPAEPDEEF-------FPALERAVR 160 (405)
T ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCcccHHHHHhc-------------CCEEEEEeCCCCCCC-------ccCHHHHHh
Confidence 99999987553 25678999999998775443322 333333322111111 234555554
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC----EEEeec
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD----IVTMAK 324 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD----ivt~sK 324 (447)
...++....+++.| ++++|.+. +.+.+++|.++|++||+++|+||+|..|...+...-......-.+| +-+|||
T Consensus 161 ~~~~~~~~v~l~~P-~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK 238 (405)
T PRK09148 161 HSIPKPIALIVNYP-SNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSK 238 (405)
T ss_pred hccccceEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccc
Confidence 43343445555556 45666655 7888999999999999999999999887543321111111211123 236999
Q ss_pred ccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcC
Q 013235 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYG 399 (447)
Q Consensus 325 ~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~ 399 (447)
.++ .|+++|++++++++++.+.......+++.+++++.++.+.|+. .+++. +.+++..+.+.+.|+ +++
T Consensus 239 ~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~--~~~~~~~~~~~~~~~r~~l~~~L~----~~~ 312 (405)
T PRK09148 239 TFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG--PQDCIAEMRELYKKRRDVLVESFG----RAG 312 (405)
T ss_pred ccCCcchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHH----HcC
Confidence 999 8999999999999998886543344667778888888777752 12333 333444444444443 334
Q ss_pred CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 400 IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 400 ~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
........|+++++++..... . ....++++.|+ ++||.+.+.
T Consensus 313 ~~~~~p~~g~f~~~~l~~~~~---~--~~~~~~~~~ll~~~gV~v~pg 355 (405)
T PRK09148 313 WDIPPPAASMFAWAPIPEAFR---H--LGSLEFSKLLVEKADVAVAPG 355 (405)
T ss_pred CccCCCCeeEEEEEECCCccC---C--CCHHHHHHHHHHhCCEEEeCc
Confidence 321224568899998742110 0 01346777766 689998753
No 131
>PRK08068 transaminase; Reviewed
Probab=99.84 E-value=1e-18 Score=177.81 Aligned_cols=307 Identities=11% Similarity=0.019 Sum_probs=184.0
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC----C--CCCc-eEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLK-VVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~----~--~~~~-~v~~~~sGs 168 (447)
.|..+|||..|... ...+|.+.+++.+.++... ...|. .....+|.+++++++ + .+.+ +|+++++++
T Consensus 30 ~~~~~i~l~~~~p~---~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~ 104 (389)
T PRK08068 30 EGHDVINLGQGNPD---QPTPEHIVEALQEAAENPA--NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGK 104 (389)
T ss_pred cCCCeEEecCCCCC---CCCCHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcH
Confidence 34567898877432 3467889999888776421 12342 333455666666654 2 3345 688999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+++..++.... .+++.|++.+++|......+... |+..+..|......|..| .+++++.+.
T Consensus 105 ~~l~~~~~~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d----~~~l~~~~~ 165 (389)
T PRK08068 105 AGLVELPQCLM--NPGDTILVPDPGYPDYLSGVALA-------------RAQFETMPLIAENNFLPD----YTKIPEEVA 165 (389)
T ss_pred HHHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhc-------------CCEEEEeecccccCCCCC----HHHHHHhcc
Confidence 99998776432 35678999999997665443322 333333332211123223 455555543
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc-ccccCCCCC---EEEeec
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPD---IVTMAK 324 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~-~~~~gv~pD---ivt~sK 324 (447)
. +..+.+++.| ++++|.+. +.+.+++|.++|++|++++|+||+|..|...+..... ....+..+. +-+|||
T Consensus 166 ~---~~~~v~l~~P-~NPTG~~~-s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK 240 (389)
T PRK08068 166 E---KAKLMYLNYP-NNPTGAVA-TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSK 240 (389)
T ss_pred c---cceEEEEECC-CCCCCCcC-CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchh
Confidence 2 2334555557 56677655 7888999999999999999999999877655421111 122222222 236999
Q ss_pred ccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 325 ~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
.+| .|+|+||+++++++++.+.........+..+..+.++.+.|..-.+ +.+.+..++..+++.+.|++ +++
T Consensus 241 ~~g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~- 315 (389)
T PRK08068 241 TFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE----IGW- 315 (389)
T ss_pred ccCCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-
Confidence 997 7999999999999998886533222233344556666666531110 12334444444444444433 332
Q ss_pred eeEeec-ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh-CCceeec
Q 013235 402 GDVRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKG-ICALFFS 445 (447)
Q Consensus 402 ~~vrg~-Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~-~Gvlv~~ 445 (447)
.-.+.. |+++++++... ....++.+.|++ +||++.+
T Consensus 316 ~~~~~~g~~~~~v~~~~~--------~~~~~~~~~l~~~~gi~v~p 353 (389)
T PRK08068 316 EVDAPKGSFFAWMPVPKG--------YTSEQFADLLLEKAHVAVAP 353 (389)
T ss_pred cccCCCeeEEEEEECCCC--------CCHHHHHHHHHHhCCEEEec
Confidence 223333 56678887321 013578899986 6999975
No 132
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=4.6e-19 Score=179.73 Aligned_cols=292 Identities=14% Similarity=0.109 Sum_probs=188.2
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
.+...|||..|.. ++| .+|.+.+++.+ ... ...|+.+...+|.++|++++..+.++|++++++++++..+++
T Consensus 50 ~~~~~i~l~~n~~--p~~-~~~~v~~a~~~-~~~----~~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 50 KPEDIVKLDANEN--PYG-PPPEVLEALGN-MKF----PYVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMR 121 (380)
T ss_pred CccceEEccCCCC--CCC-CCHHHHHHHHh-hHh----hccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHH
Confidence 4568899988775 456 67888888754 221 123566667889999999987667889999999999999887
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
... ..++.|++.+++|......+... |...+..|.. ..|..| .+++++.+.. + ++.
T Consensus 122 ~~~--~~gd~Vlv~~P~y~~y~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~~~~~~--~-~~~ 177 (380)
T PLN03026 122 CVL--DPGDKIIDCPPTFGMYVFDAAVN-------------GAEVIKVPRT--PDFSLD----VPRIVEAVET--H-KPK 177 (380)
T ss_pred Hhc--CCCCEEEEcCCChHHHHHHHHHc-------------CCEEEEeecC--CCCCcC----HHHHHHHHhc--c-CCc
Confidence 542 25578999999986443322211 2333332221 123334 4566666632 1 345
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 332 (447)
++++...++++|.+.+ .+++.++++.. +++|+||+|..|...++ .. ....-.+.++ +|||.+| .|+|+
T Consensus 178 ~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~-~~--~~~~~~~~viv~~SfSK~~glaGlRi 249 (380)
T PLN03026 178 LLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQES-RM--KWVKKYDNLIVLRTFSKRAGLAGLRV 249 (380)
T ss_pred EEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcc-hH--HHHHhCCCEEEEecchHhhcCccccc
Confidence 5555555777787775 56667777654 89999999998854332 11 1111223433 6999999 89999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcCCeeeEeecc
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYGIIGDVRGRG 408 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G 408 (447)
||+++++++++.+.... ..|+.+.+++.++.++|+ +.++. +.+++..+++.+.|+ +++.+.-.+..|
T Consensus 250 Gy~~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~aL~---~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~p~~~ 320 (380)
T PLN03026 250 GYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALS---NPKYLEDVKNALVEERERLFGLLK----EVPFLEPYPSDA 320 (380)
T ss_pred eeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHHHHHHH----HCCCCeECCCCC
Confidence 99999999998876432 346778888888888884 22333 333333344444443 334332245678
Q ss_pred eeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 409 l~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++.+++... ....++.+.|+++||+++.
T Consensus 321 ~f~~~~~~~~--------~~~~~~~~~l~~~gI~v~~ 349 (380)
T PLN03026 321 NFILCRVTSG--------RDAKKLKEDLAKMGVMVRH 349 (380)
T ss_pred eEEEEECCCC--------CCHHHHHHHHHHCCeEEEE
Confidence 8888886321 0135788999999999864
No 133
>PLN00175 aminotransferase family protein; Provisional
Probab=99.84 E-value=1.5e-18 Score=177.81 Aligned_cols=304 Identities=15% Similarity=0.158 Sum_probs=188.4
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC----C--CCCc-eEEEcCCHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLK-VVFFTNSGTEAN 171 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~----~--~~~~-~v~~~~sGseA~ 171 (447)
..|||..|.... . .++.+.+++.+.++.. ...|. .....+|.+.+++++ + .+.+ +|++++++++|+
T Consensus 55 ~~i~l~~G~P~~--~-~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al 128 (413)
T PLN00175 55 GAINLGQGFPNF--D-GPDFVKEAAIQAIRDG---KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI 128 (413)
T ss_pred CeEecCCCCCCC--C-CCHHHHHHHHHHHhcC---CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence 579998887642 3 4688899988887652 12232 223444555554433 2 2333 689999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
..++... ...++.|++.+++|.+........ |...+..|.... .|..| .++|++.+..
T Consensus 129 ~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~-~~~~~----~~~l~~~~~~-- 186 (413)
T PLN00175 129 AATILGL--INPGDEVILFAPFYDSYEATLSMA-------------GAKIKTVTLRPP-DFAVP----EDELKAAFTS-- 186 (413)
T ss_pred HHHHHHh--CCCCCEEEEeCCCchhHHHHHHHc-------------CCEEEEEECCcc-cCCCC----HHHHHHhcCc--
Confidence 9988743 236688999999997655433322 222222221111 13334 5667766642
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEE---Eeecccc
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIV---TMAKGIG 327 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDiv---t~sK~lg 327 (447)
++.++++...++++|.+. +++.+++|.++|++||+++|+||+|..|...+ ....+ +..+..+.++ +|||.++
T Consensus 187 --~~k~i~i~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~ 262 (413)
T PLN00175 187 --KTRAILINTPHNPTGKMF-TREELELIASLCKENDVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFS 262 (413)
T ss_pred --CceEEEecCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhcc
Confidence 345666665667778765 78899999999999999999999998875544 22122 2222222333 6899999
Q ss_pred -CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE
Q 013235 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (447)
Q Consensus 328 -~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 404 (447)
.|+|+||+++++++++.+.......+++.+++.+.++.+.|+.-++ +++.+..++..+.+.+.|++ +++....
T Consensus 263 ~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~ 338 (413)
T PLN00175 263 LTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE----VGFKVYP 338 (413)
T ss_pred CcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecC
Confidence 7999999999999998886544445788888888888888853111 12333444444555555544 3321112
Q ss_pred eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 405 rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
...|+++++.+...+ .. ...++++.|+ ++||.+.+
T Consensus 339 p~g~~f~~~~~~~~~---~~---~~~~~~~~ll~~~gV~v~p 374 (413)
T PLN00175 339 SSGTYFVMVDHTPFG---FE---NDIAFCEYLIEEVGVAAIP 374 (413)
T ss_pred CCeeEEEEEeccccC---CC---CHHHHHHHHHHhCCEEEeC
Confidence 233667777763211 00 1356888886 56998865
No 134
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.84 E-value=6.4e-19 Score=179.34 Aligned_cols=310 Identities=12% Similarity=0.065 Sum_probs=184.5
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhC------CCCCceEEEcCCHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM------PGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~------~~~~~~v~~~~sGseA~ 171 (447)
..+|||..|... ++ .++.+.+++.+.+.... ..| +.....+|.+.+++++ +...+++++++|+++|+
T Consensus 33 ~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 106 (391)
T PRK08361 33 ENVISLGIGEPD--FD-TPKNIKEAAKRALDEGW---THYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEAT 106 (391)
T ss_pred cCeEEcCCCCCC--CC-CCHHHHHHHHHHHhcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHH
Confidence 357998877653 44 36788888887765421 112 3334455666666553 23457899999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
..+++... ..++.|++.+++|.+....+.. . |...++.|....+.|..| .+++++.+..
T Consensus 107 ~~~~~~l~--~~g~~Vlv~~p~y~~~~~~~~~-~------------g~~~~~v~~~~~~~~~~d----~~~l~~~i~~-- 165 (391)
T PRK08361 107 YLAFESLL--EEGDEVIIPDPAFVCYVEDAKI-A------------EAKPIRIPLREENEFQPD----PDELLELITK-- 165 (391)
T ss_pred HHHHHHhc--CCCCEEEEcCCCCcccHHHHHH-c------------CCEEEEEecCCccCCCCC----HHHHHHhccc--
Confidence 99987542 3567899999998765433221 1 222333322222223344 5666666542
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE--Eeecccc-C
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIG-N 328 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg-~ 328 (447)
++.++++...++++|.+. +.+.+++|.++|+++++++|+||++..|...+.............+++ ++||.+| .
T Consensus 166 --~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~ 242 (391)
T PRK08361 166 --RTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMT 242 (391)
T ss_pred --ccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCc
Confidence 334444443366777665 677889999999999999999999988744332111111111122333 6899998 7
Q ss_pred CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeec-
Q 013235 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR- 407 (447)
Q Consensus 329 G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~- 407 (447)
|+++|++++++++++.+.......+++.+.+.+.++.+.|+.-...+..++.++.-+..++.+.+..++++.+.-.+..
T Consensus 243 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g 322 (391)
T PRK08361 243 GWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKG 322 (391)
T ss_pred HhhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCE
Confidence 9999999999999887654333345667778777777777421111223333333222333333333333323323333
Q ss_pred ceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 408 Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
|+++++++.... . ...++.+.|+ ++||++.+
T Consensus 323 ~~~~~~~l~~~~----~---~~~~l~~~l~~~~gv~v~p 354 (391)
T PRK08361 323 AFYVFANIDETG----M---SSEDFAEWLLEKARVVVIP 354 (391)
T ss_pred EEEEEEECCCCC----C---CHHHHHHHHHHhCCEEEcC
Confidence 677888874211 0 1346777776 47999865
No 135
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.84 E-value=4.4e-19 Score=177.41 Aligned_cols=292 Identities=15% Similarity=0.142 Sum_probs=190.0
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
.+.|||..|.. .++ .+|++++|+.+++... ..|..+...++.+.++++++.+.+++++++++++++..+++..
T Consensus 19 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNEN--PFG-PPPKAKEALRAEADKL----HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCC--CCC-CCHHHHHHHHHhHHHh----hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh
Confidence 47999998776 456 5799999999877543 2344444578999999998765678999999999998888754
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
. .++++|++.+++|......+.. .|+.....|... .+..| .+++++.+. + +++++
T Consensus 92 ~--~~gd~v~~~~p~y~~~~~~~~~-------------~g~~~~~~~~~~--~~~~d----~~~l~~~~~---~-~~~~v 146 (346)
T TIGR01141 92 L--EPGDAVLVPPPTYSMYEISAKI-------------HGAEVVKVPLDE--DGQLD----LEDILVAID---D-KPKLV 146 (346)
T ss_pred c--CCCCEEEEcCCCHHHHHHHHHH-------------cCCeEEEeccCC--CCCCC----HHHHHHhcC---C-CCCEE
Confidence 3 3567899999888432211111 133333332211 12233 455665542 2 45666
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHh--CCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKA--GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 332 (447)
++...++++|.+.+ ++++.++|+.+ |+++|+||+|.+|...+ ..+ ......++++ +++|.+| .|+++
T Consensus 147 ~l~~p~NptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~-~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~ 219 (346)
T TIGR01141 147 FLCSPNNPTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEP-STL--PLLAEYPNLIVLRTLSKAFGLAGLRI 219 (346)
T ss_pred EEeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCc-cHH--HHHhhCCCEEEEehhhHhhhchhhhc
Confidence 66666777888876 56666666665 99999999999775432 222 1122234544 5889996 68999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeE
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~ 411 (447)
|++++++++.+.+... ..+|+.+++++.++.+.|+... -++..++++++.+++++.|++ ++.+.-++..|.++
T Consensus 220 G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~g~~~ 293 (346)
T TIGR01141 220 GYAIANAEIIDALNKV--RAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKK----LPGLEVYPSDANFV 293 (346)
T ss_pred eeeecCHHHHHHHHhc--cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEECCCcCCEE
Confidence 9999999998887643 2457778989888877775432 112334444444455554443 32233344568888
Q ss_pred EEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 412 GVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 412 giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++++.. ...++++.|.++||++.+
T Consensus 294 ~~~~~~----------~~~~~~~~L~~~gI~v~~ 317 (346)
T TIGR01141 294 LIRFPR----------DADALFEALLEKGIIVRD 317 (346)
T ss_pred EEecCC----------CHHHHHHHHHHCCeEEEe
Confidence 888732 145788899999999875
No 136
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-18 Score=176.63 Aligned_cols=304 Identities=14% Similarity=0.094 Sum_probs=185.8
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhC------CCCCceEEEcCCHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKM------PGNLKVVFFTNSGTEANE 172 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~------~~~~~~v~~~~sGseA~e 172 (447)
.++||..|.. .+. .+|++.+++.+.+... ...|.++ ...+|.+.+++++ +...+++++++++++|+.
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~ 103 (384)
T PRK06348 30 DIIDLSLGDP--DLI-TDESIINAAFEDAKKG---HTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY 103 (384)
T ss_pred CcEEcCCCCC--CCC-CCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence 4688887755 344 3577777666544321 1223322 2344555555543 345678999999999999
Q ss_pred HHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCC
Q 013235 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252 (447)
Q Consensus 173 ~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~ 252 (447)
.++.... .+++.|++.+++|.+....+... |...++.|......|..| .+++++.+..
T Consensus 104 ~~~~~~~--~~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~~~~--- 161 (384)
T PRK06348 104 LALQSIL--DPGDEVIIHEPYFTPYKDQIEMV-------------GGKPIILETYEEDGFQIN----VKKLEALITS--- 161 (384)
T ss_pred HHHHHhc--CCCCEEEEeCCCCcchHHHHHHc-------------CCEEEEecCCcCcCCcCC----HHHHHHhhCc---
Confidence 9988653 25678999999998766554433 222233322111123334 5667766642
Q ss_pred CCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccccc-CCCCCEE---Eeecccc-
Q 013235 253 GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GVVPDIV---TMAKGIG- 327 (447)
Q Consensus 253 ~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~-gv~pDiv---t~sK~lg- 327 (447)
+..+.++..| ++++|.+. +.+.+++|.++|+++|+++|+||+|.+|...+ ....+... +..+.++ +|||.++
T Consensus 162 ~~~~v~l~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l 238 (384)
T PRK06348 162 KTKAIILNSP-NNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAM 238 (384)
T ss_pred CccEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCC
Confidence 1223444445 66677765 78889999999999999999999999885433 22111111 1222333 6899999
Q ss_pred CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe
Q 013235 328 NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (447)
Q Consensus 328 ~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr 405 (447)
.|+|+|++++++++++.+.......+++.++++..++..+|+..++ +++.+..+++.+++.+.|+. ++.+.-..
T Consensus 239 ~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~----~~~~~~~~ 314 (384)
T PRK06348 239 TGWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES----IPNLSLHP 314 (384)
T ss_pred ccccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecc
Confidence 8999999999999988776544456788899999888888853211 12233333444444444433 22222222
Q ss_pred -ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 406 -GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 406 -g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
..|+++++++.... . ...++++.|+ +.||.+.+
T Consensus 315 p~gg~~~~~~~~~~~----~---~~~~l~~~l~~~~gv~v~p 349 (384)
T PRK06348 315 PKGSIYAFINIKKTG----L---SSVEFCEKLLKEAHVLVIP 349 (384)
T ss_pred CCeeEEEEEecccCC----C---CHHHHHHHHHHhCCEEEcC
Confidence 34677888874211 0 1356788876 56998874
No 137
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.84 E-value=4.8e-19 Score=176.19 Aligned_cols=280 Identities=21% Similarity=0.220 Sum_probs=188.6
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
...+||..|.. +++. | +.++ ..+. ...|+++...++.+.++++++...+++++++++++++..+.++
T Consensus 17 ~~~~~~~~~~~--~~~~--~-~~~~---~~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~- 83 (330)
T TIGR01140 17 EDWLDFSTGIN--PLGP--P-VPPI---PASA----WARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL- 83 (330)
T ss_pred hheeEccccCC--CCCC--C-hhhc---chHH----HhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-
Confidence 45788888874 3342 3 2221 1111 1235555568899999999876667899999999999886554
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
.+++ +|++.+++|++....... .|+..+..| | .+++++.+.. ..+.+
T Consensus 84 --l~~g-~vl~~~p~y~~~~~~~~~-------------~g~~~~~~~---------d----~~~l~~~~~~----~~~v~ 130 (330)
T TIGR01140 84 --LAPG-RVLVLAPTYSEYARAWRA-------------AGHEVVELP---------D----LDRLPAALEE----LDVLV 130 (330)
T ss_pred --hCCC-eEEEeCCCcHHHHHHHHH-------------cCCEEEEeC---------C----HHHHHhhccc----CCEEE
Confidence 2344 799999999876543321 133344333 2 4566665531 22566
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGA 334 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~piga 334 (447)
++.| ++++|.+. +.+.+++|.++|+++|+++|+||+|.+|.... .... ..+..++++ +|||.+| .|+|+|+
T Consensus 131 i~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~--~~~~~~~~i~~~S~SK~~g~~G~R~G~ 205 (330)
T TIGR01140 131 LCNP-NNPTGRLI-PPETLLALAARLRARGGWLVVDEAFIDFTPDA-SLAP--QAARFPGLVVLRSLTKFFGLAGLRLGF 205 (330)
T ss_pred EeCC-CCCCCCCC-CHHHHHHHHHHhHhcCCEEEEECcccccCCcc-chhh--HhccCCCEEEEEecchhhcCchhhhhh
Confidence 6777 45666655 78889999999999999999999998885432 2221 112223444 7999999 7999999
Q ss_pred cccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEE
Q 013235 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (447)
Q Consensus 335 v~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gie 414 (447)
+++++++++.+... ..+++.|+++++++.+.|+ ++++.++.++.-+..++.+.+..++++.+....+.|+|++++
T Consensus 206 i~~~~~~~~~l~~~--~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~ 280 (330)
T TIGR01140 206 VVAHPALLARLREA--LGPWTVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVR 280 (330)
T ss_pred eeCCHHHHHHHHhc--CCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEE
Confidence 99999999888743 3456778888777777664 445555555555666666666666666444446678998887
Q ss_pred EeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 415 FVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 415 l~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.+ ..+++++|+++||++.+
T Consensus 281 ~~~-----------~~~l~~~l~~~gi~v~p 300 (330)
T TIGR01140 281 TPD-----------AAALHEALARRGILIRD 300 (330)
T ss_pred cCC-----------HHHHHHHHHHCCEEEEE
Confidence 631 24788999999999875
No 138
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.2e-18 Score=178.25 Aligned_cols=310 Identities=15% Similarity=0.059 Sum_probs=184.3
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhC----C---CCCc-eEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM----P---GNLK-VVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~----~---~~~~-~v~~~~sGs 168 (447)
.|+.++|+..|.. .++ .+|.+.+++.+.+.... ...|+.....+|.+.+++++ + .+.+ +|+++++++
T Consensus 42 ~~~~~i~L~~g~p--~~~-~~~~~~~~l~~~~~~~~--~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~ 116 (410)
T PRK06290 42 PDMELIDMGVGEP--DEM-ADESVVEVLCEEAKKPE--NRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK 116 (410)
T ss_pred CCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhCCC--CCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHH
Confidence 5667899988775 455 46788888877664321 12344344455666666553 2 2334 699999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+++..++.... ..++.|++.+++|.+....+... |...+..|....+.|..| ++++++.+.
T Consensus 117 ~al~~~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d----~~~l~~~~~ 177 (410)
T PRK06290 117 PALAMLPSCFI--NPGDVTLMTVPGYPVTGTHTKYY-------------GGEVYNLPLLEENNFLPD----LDSIPKDIK 177 (410)
T ss_pred HHHHHHHHHhC--CCCCEEEEeCCCCccHHHHHHHc-------------CCEEEEEecCCCcCCcCC----HHHHHHhhc
Confidence 99998887443 35678999999998765444322 233333332222223223 455555553
Q ss_pred ccCCCCeEEEEEc-cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCC-CCEE--Eee
Q 013235 249 FGTSGHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVV-PDIV--TMA 323 (447)
Q Consensus 249 ~~~~~~~aavi~E-pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~-pDiv--t~s 323 (447)
. ++.++++. | ++++|.+. +.+.+++|.++|++||++||+||+|..|...+ ..-.+ +..+.. .+|+ +||
T Consensus 178 ~----~~k~i~l~nP-~NPTG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfS 250 (410)
T PRK06290 178 E----KAKLLYLNYP-NNPTGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLS 250 (410)
T ss_pred c----cceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeech
Confidence 2 34455555 6 67777765 78889999999999999999999998874433 11111 111111 1233 699
Q ss_pred cccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 324 KGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 324 K~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
|.++ .|+|+|++++++++++.+.......+.+.+.+++.++.+.|+.-+ -+++.+++++..+++.+.|++ +++
T Consensus 251 K~~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~- 325 (410)
T PRK06290 251 KAYNMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE----VGF- 325 (410)
T ss_pred hhcCCchhheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh----CCC-
Confidence 9997 799999999999999887653333334444567777767664210 012333344444444444443 332
Q ss_pred eeEee-cceeEEEEEeeCCC-CCCCCHHHHHHHHHHHHhCCceee
Q 013235 402 GDVRG-RGFLLGVEFVTDRQ-LKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 402 ~~vrg-~Gl~~giel~~~~~-~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
.-.+. .|+++++++.+... .... ....++++.|+++|+++.
T Consensus 326 ~~~~p~g~f~l~v~lp~~~~~~~~~--~~~~~~~~~Ll~~~~v~~ 368 (410)
T PRK06290 326 KAEMPGGTFYLYVKAPKGTKSGIKF--ENAEEFSQYLIKEKLIST 368 (410)
T ss_pred eecCCCeeeEEEEECCCccccCCCC--CCHHHHHHHHHHhCCEEE
Confidence 22223 35666777742210 0000 124578999999876553
No 139
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.83 E-value=1.8e-18 Score=173.44 Aligned_cols=303 Identities=13% Similarity=0.065 Sum_probs=182.1
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhC----C--CCCc-eEEEcCCHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKM----P--GNLK-VVFFTNSGTEAN 171 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~----~--~~~~-~v~~~~sGseA~ 171 (447)
+.+||..|... ++ ..|++.+++.+..... ..|+++ ...+|.+.+++++ . .+.+ +|++++++++|+
T Consensus 1 ~~~~~~~g~p~--~~-~~~~~~~~~~~~~~~~----~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai 73 (350)
T TIGR03537 1 RLFDFGTGDPK--EP-TPPFIRKALIDAVPEV----SQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAI 73 (350)
T ss_pred CeEeccCCCCC--CC-CCHHHHHHHHHHHhcc----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHH
Confidence 46788888753 44 4788999988765432 223332 2344555555443 2 3344 799999999999
Q ss_pred HHHHHHHHhhcC--CCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 172 ELAIMMARLYTG--CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 172 e~Aik~ar~~t~--~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
..++..... .| ++.|++.+++|.+....+... |+..++.|......|..| .+++++.+..
T Consensus 74 ~~~~~~~~~-~g~~~d~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~~ 135 (350)
T TIGR03537 74 FHFPLVFID-PEEDRRRVIFGTPGYPVYERGALFA-------------GGEPTAVKLKKEDGFLLR----LEKVEKSILE 135 (350)
T ss_pred HHHHHHHcC-CCCCCceEEEcCCCCcchHHHHHhc-------------CCEEEEcccCcccCCccC----HHHHHHhhhh
Confidence 888764432 12 268999999998766654332 333444433222233334 5666666543
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeeccc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGI 326 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~l 326 (447)
++.++++.+.++++|.+. +.+.+++|.++|++||+++|+||+|..+...+ ........+. +.++ ++||.+
T Consensus 136 ----~~~~i~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~ 208 (350)
T TIGR03537 136 ----ETKIVWINYPHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVGI-ENVLAFHSLSKRS 208 (350)
T ss_pred ----ccEEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcCc-CCEEEEeeccccc
Confidence 344555555567777654 78889999999999999999999997653322 2211111121 2233 589999
Q ss_pred c-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe
Q 013235 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (447)
Q Consensus 327 g-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr 405 (447)
| .|+++|++++++++.+.+.......+.+.+++..+++.+.|. ++++.++.++.-+..++.+.+..++++......
T Consensus 209 g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~ 285 (350)
T TIGR03537 209 GMTGYRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP 285 (350)
T ss_pred CCccccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 6 699999999999988877643222334455566677766663 233333322222222333333333333211123
Q ss_pred ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 406 g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
..|+++++++.+. ....++++.|.++||++.+
T Consensus 286 ~g~~~~~~~~~~~--------~~~~~l~~~L~~~gv~v~~ 317 (350)
T TIGR03537 286 DATFYLWVKVPSG--------IDAKDYALRLLENGIVVAP 317 (350)
T ss_pred CeEEEEEEECCCC--------CCHHHHHHHHHHCCEEEcC
Confidence 3467788887321 1135788999999999874
No 140
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.83 E-value=4.8e-19 Score=176.22 Aligned_cols=296 Identities=19% Similarity=0.167 Sum_probs=185.3
Q ss_pred ccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCC------CCceEEEcCCHHHHHHHHHHHHHhhcCC
Q 013235 111 VCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPG------NLKVVFFTNSGTEANELAIMMARLYTGC 184 (447)
Q Consensus 111 ~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~------~~~~v~~~~sGseA~e~Aik~ar~~t~~ 184 (447)
.++. .+|.+..++.+ ...........+.....++++.+++.+.. ..+.++++++|++|+..+++.+.. .+
T Consensus 8 ~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~g 83 (350)
T cd00609 8 PDFP-PPPEVLEALAA-AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN--PG 83 (350)
T ss_pred CCCC-CCHHHHHHHHH-HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--CC
Confidence 3555 45666666554 11111111112233444555555554422 256799999999999999986643 46
Q ss_pred CeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEcccc
Q 013235 185 NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQ 264 (447)
Q Consensus 185 ~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~ 264 (447)
++|++.+++|++....+.... ..+..++. ...+.+..+ .+.++..+ ..++++|++++.+
T Consensus 84 ~~vl~~~~~~~~~~~~~~~~~-----------~~~~~i~~--~~~~~~~~~----~~~~~~~~----~~~~~~v~i~~~~ 142 (350)
T cd00609 84 DEVLVPDPTYPGYEAAARLAG-----------AEVVPVPL--DEEGGFLLD----LELLEAAK----TPKTKLLYLNNPN 142 (350)
T ss_pred CEEEEcCCCchhHHHHHHHCC-----------CEEEEEec--ccccCCccC----HHHHHhhc----CccceEEEEECCC
Confidence 788888888876554333221 01222222 111111000 12233322 2478899999988
Q ss_pred CCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc----ccccCCCCCEEEeecccc-CCccccccccCH
Q 013235 265 GVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG----FEAHGVVPDIVTMAKGIG-NGIPLGAVVTTP 339 (447)
Q Consensus 265 ~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~----~~~~gv~pDivt~sK~lg-~G~pigav~~~~ 339 (447)
+++|.+. |.+.+++|.++|+++|+++|+||+++++...+ .... ....+....+.+++|.++ +|+++|++++++
T Consensus 143 ~~tG~~~-~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~ 220 (350)
T cd00609 143 NPTGAVL-SEEELEELAELAKKHGILIISDEAYAELVYDG-EPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP 220 (350)
T ss_pred CCCCccc-CHHHHHHHHHHHHhCCeEEEEecchhhceeCC-cccccccCcCccCcEEEEeecccccCCcccceEEEecCH
Confidence 8889866 67789999999999999999999999987666 3321 122222222336899999 889999999999
Q ss_pred -HHHHhhcCCcccccCCCChHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHhcCCee-eEeecceeEEEEE
Q 013235 340 -EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ--KDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRGRGFLLGVEF 415 (447)
Q Consensus 340 -~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~vrg~Gl~~giel 415 (447)
++.+.+.......+++.++.++.++.+.|+..+ -+.+.++++++.+++++.|++. +... .....|.++.+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~g~~~~~~~ 296 (350)
T cd00609 221 EELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL----GPLVVVKPSGGFFLWLDL 296 (350)
T ss_pred HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCccEEEEEec
Confidence 888888765555678888888888888887652 2345566666677777766654 2222 3456688888877
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 416 VTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 416 ~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
... .....+.+.|.+.||.+..
T Consensus 297 ~~~--------~~~~~~~~~l~~~gi~i~~ 318 (350)
T cd00609 297 PEG--------DDEEFLERLLLEAGVVVRP 318 (350)
T ss_pred CCC--------ChHHHHHHHHHhCCEEEec
Confidence 432 1134456667777998864
No 141
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.9e-18 Score=175.85 Aligned_cols=309 Identities=14% Similarity=0.138 Sum_probs=185.5
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC------CCCCceEEEcCCHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSGTEA 170 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~------~~~~~~v~~~~sGseA 170 (447)
+...+||..|.... . .+|.+.+++.+.+.... ..|. .....+|.+.|++++ ....+++++++++++|
T Consensus 30 ~~~~~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a 103 (393)
T PRK05764 30 GRDVISLGAGEPDF--D-TPEHIKEAAIEALDDGK---TKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQA 103 (393)
T ss_pred cCCEEEeCCCCCCC--C-CCHHHHHHHHHHHhcCC---CCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHH
Confidence 34688988887643 3 57899999888776431 1232 223455555555553 2334679999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..++.... ..++.|++.+++|.+....+... |...+..|......|..| .+++++.+.
T Consensus 104 ~~~~~~~~~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~l~-- 162 (393)
T PRK05764 104 LYNAFMALL--DPGDEVIIPAPYWVSYPEMVKLA-------------GGVPVFVPTGEENGFKLT----VEQLEAAIT-- 162 (393)
T ss_pred HHHHHHHhc--CCCCEEEecCCCCcchHHHHHHc-------------CCEEEEEecCcccCCcCC----HHHHHHhhC--
Confidence 999887653 25678999999987654433221 222222222111123233 456666653
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc--cCCCC-CEE--Eeecc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA--HGVVP-DIV--TMAKG 325 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~--~gv~p-Div--t~sK~ 325 (447)
++..+.++..| ++++|.+. +.+.+++|.++|++||+++|+||+|..|...|..+..... .+..+ +++ +|||.
T Consensus 163 -~~~~~v~~~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 239 (393)
T PRK05764 163 -PKTKALILNSP-SNPTGAVY-SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKA 239 (393)
T ss_pred -ccceEEEEECC-CCCCCccc-CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCccc
Confidence 22334455555 55667665 5678999999999999999999999877544422222211 12222 232 59999
Q ss_pred cc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHHHhcCC
Q 013235 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDK----LQNNAHVVGSYLKERLTALKDKYGI 400 (447)
Q Consensus 326 lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~~~ 400 (447)
++ .|+++|++++++++++.+.......+++.+++++.++.+.|+. .++ +.+..+++.+.+++.|+ +++.
T Consensus 240 ~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~----~~~g 313 (393)
T PRK05764 240 YAMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--PQDEVEEMRQAFEERRDLMVDGLN----EIPG 313 (393)
T ss_pred ccCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHh----hCCC
Confidence 99 7999999999999988876433334556788888888887752 122 23333334444444444 3322
Q ss_pred eeeEeec-ceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 401 IGDVRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 401 i~~vrg~-Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
+.-.++. |.++++.+..... +......++.+.|+ ++||.+.+
T Consensus 314 ~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~ 357 (393)
T PRK05764 314 LECPKPEGAFYVFPNVSKLLG---KSITDSLEFAEALLEEAGVAVVP 357 (393)
T ss_pred CcccCCCcceEEEEecccccc---cccCCHHHHHHHHHHhCCEEEcc
Confidence 2223344 4677777743210 00001356777775 57999865
No 142
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.83 E-value=2.6e-18 Score=174.38 Aligned_cols=311 Identities=12% Similarity=0.043 Sum_probs=183.7
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhC----C--CCCc-eEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKM----P--GNLK-VVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~----~--~~~~-~v~~~~sGs 168 (447)
.|..++||..|.. .++ .++.+.+++.+.+.... ...|+.+ ...+|.+.+++++ . ...+ .|+++++++
T Consensus 27 ~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~ 101 (383)
T TIGR03540 27 EGVDVISLGIGDP--DLP-TPKHIVEALCKAAENPE--NHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSK 101 (383)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcH
Confidence 3567788888765 345 46889999888765421 1233322 2345555555543 2 2233 688999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+++..+++... .+++.|++.+++|.+....+... |...++.|......+..| .+++++.+.
T Consensus 102 ~~l~~~~~~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------G~~v~~v~~~~~~g~~~d----~~~l~~~~~ 162 (383)
T TIGR03540 102 EGIAHIPLAFV--NPGDIVLVPDPGYPVYRIGTLFA-------------GGEPYEMPLKEENGFLPD----FDAIPEDIA 162 (383)
T ss_pred HHHHHHHHHhC--CCCCEEEEeCCCCcchHHHHHhc-------------CCEEEEEecCcccCCccC----HHHHHhhcc
Confidence 99999987542 35678999999998765544332 233333332111122223 455655543
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccccc----CCCCCEEEeec
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH----GVVPDIVTMAK 324 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~----gv~pDivt~sK 324 (447)
+ ++.++++...++++|.+. +.+.+++|.++|++||+++|+||+|..+...+.....+... +....+-+|||
T Consensus 163 ---~-~~~~v~i~~P~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK 237 (383)
T TIGR03540 163 ---K-KAKLMFINYPNNPTGAVA-PLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSK 237 (383)
T ss_pred ---c-cceEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEeccc
Confidence 2 344555443366777765 78889999999999999999999998775443111111111 12223447999
Q ss_pred ccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 013235 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (447)
Q Consensus 325 ~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 403 (447)
.+| .|+|+|++++++++++.+.......+.+.+.+.+.++.+.|+.. +++.+..++.-+..++.+.+..+++++...
T Consensus 238 ~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 315 (383)
T TIGR03540 238 TYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP--QDVVKEIRKIYQRRRDLLLEALKKIGIDVE 315 (383)
T ss_pred ccCCccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEec
Confidence 997 79999999999999887764322223344566777776666421 233333222222223333333334442211
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
....|+++++++.+. ....+++++|+ ++||++.+.
T Consensus 316 ~~~~~~~~~~~l~~~--------~~~~~~~~~ll~~~gi~v~~g 351 (383)
T TIGR03540 316 KPKATFYVWVPVPEG--------YTSAEFAARLLEETGVVVTPG 351 (383)
T ss_pred CCCcceEEEEECCCC--------CCHHHHHHHHHHHCCEEEecc
Confidence 222467788887321 11356888875 679998753
No 143
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.83 E-value=3.1e-18 Score=174.52 Aligned_cols=306 Identities=13% Similarity=0.071 Sum_probs=183.5
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhC----C--CCCc-eEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM----P--GNLK-VVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~----~--~~~~-~v~~~~sGse 169 (447)
|..+|||..|.. .+..++.+.+++.+.+.... ...|+. ....+|.+.+++++ + .+.+ .+++++++++
T Consensus 34 g~~~i~l~~g~p---~~~~p~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 34 GLDLIDLGMGNP---DGAAPQPVIEAAIAALADPQ--NHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCC--CccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 556789987643 23345678888877765321 123332 22345555555543 2 2344 5888999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
|+..++... ...++.|++.+++|.+....+... |...++.|......|..| .+++++.+.
T Consensus 109 al~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~- 168 (394)
T PRK05942 109 GLTHLALAY--VNPGDVVLVPSPAYPAHFRGPLIA-------------GAQIYPIILKPENDWLID----LSSIPEEVA- 168 (394)
T ss_pred HHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHHc-------------CCEEEEeecCCccCCccC----HHHHHHhcc-
Confidence 999988754 235688999999997755433221 233333332222233334 455665553
Q ss_pred cCCCCeEEEEEc-cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC---cccccc-cCCCCCEEEeec
Q 013235 250 GTSGHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH---FWGFEA-HGVVPDIVTMAK 324 (447)
Q Consensus 250 ~~~~~~aavi~E-pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~---~~~~~~-~gv~pDivt~sK 324 (447)
+ ++.++++. | ++++|.+. +.+.+++|.++|+++|+++|+||+|..|...+.. +..+.. .+....+-+|||
T Consensus 169 --~-~~k~i~l~~P-~NPtG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK 243 (394)
T PRK05942 169 --Q-QAKILYFNYP-SNPTTATA-PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSK 243 (394)
T ss_pred --c-cceEEEEcCC-CCCCCCcC-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchh
Confidence 2 44455554 6 66777664 7888999999999999999999999877544421 111111 112223446999
Q ss_pred ccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 325 ~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
.++ .|+++|++++++++++.+........++.+.+++.++.++|+..++ ++..+++++..+++.+.|++ +++.
T Consensus 244 ~~~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~ 319 (394)
T PRK05942 244 TYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGWN 319 (394)
T ss_pred ccCChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCe
Confidence 997 7999999999999998887533334566677777777777753221 12334444444445554443 3321
Q ss_pred eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHH-HhCCceeec
Q 013235 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KGICALFFS 445 (447)
Q Consensus 402 ~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l-~~~Gvlv~~ 445 (447)
......|+++++++... .+ ..++..++ .++||++.+
T Consensus 320 ~~~~~~~~f~~~~~~~~-----~~---~~~~~~~~l~~~gV~v~~ 356 (394)
T PRK05942 320 IPPTKATMYLWVPCPVG-----MG---STDFALNVLQKTGVVVTP 356 (394)
T ss_pred ecCCCeeeEEEEECCCC-----CC---HHHHHHHHHHHCCEEEeC
Confidence 11233466888887321 01 23455544 578999865
No 144
>PRK03321 putative aminotransferase; Provisional
Probab=99.82 E-value=1.3e-18 Score=174.59 Aligned_cols=294 Identities=16% Similarity=0.128 Sum_probs=189.4
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
.+|||..|.. .+| ..|.+.+|+.+.+..+ ..|+.....++.+.+++++..+.++|+++++.++++..++...
T Consensus 23 ~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~----~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~- 94 (352)
T PRK03321 23 GAIKLSSNET--PFG-PLPSVRAAIARAAAGV----NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT- 94 (352)
T ss_pred cceeccCCCC--CCC-CCHHHHHHHHHHHHhc----CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh-
Confidence 4799887766 355 5678999988776543 2355567788999999998766678999988888888777643
Q ss_pred hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEE
Q 013235 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (447)
Q Consensus 180 ~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi 259 (447)
..+++.|++..++|....... .. .|...+..|... .++.| .+++++.+.. ++.+++
T Consensus 95 -~~~gd~Vli~~p~y~~~~~~~-~~------------~g~~~~~v~~~~--~~~~~----~~~l~~~~~~----~~~~v~ 150 (352)
T PRK03321 95 -AGPGDEVIFAWRSFEAYPILV-QV------------AGATPVQVPLTP--DHTHD----LDAMAAAITD----RTRLIF 150 (352)
T ss_pred -cCCCCEEEeCCCCHHHHHHHH-HH------------cCCEEEEccCCC--CCCCC----HHHHHHhhcc----CCCEEE
Confidence 235678888888774322111 11 133333333211 12233 5666666642 344555
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHH--hCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcccc
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLG 333 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig 333 (447)
+...++++|.+.+ .+++.++|++ +++++|+||+|.+|...+....+.+.....++++ +|||.+| .|+|+|
T Consensus 151 l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG 226 (352)
T PRK03321 151 VCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVG 226 (352)
T ss_pred EeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhh
Confidence 5555677788875 5667777766 5999999999998865542112223333346666 5899998 799999
Q ss_pred ccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEE
Q 013235 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (447)
Q Consensus 334 av~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gi 413 (447)
++++++++++.+... ..+++.+++++.++.++|+. .+.+.++.++..+. ++.+.+...+++. ...+..|+++++
T Consensus 227 ~~v~~~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~-r~~~~~~L~~~~~-~~~~~~g~~i~i 300 (352)
T PRK03321 227 YAVGHPEVIAALRKV--AVPFSVNSLAQAAAIASLAA--EDELLERVDAVVAE-RDRVRAALRAAGW-TVPPSQANFVWL 300 (352)
T ss_pred hhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHH-HHHHHHHHHHCCC-ccCCCCCCEEEE
Confidence 999999999988743 35678899999988888852 23344444333222 2223333333332 223446889888
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+..+ ..++.+.|.++||++.+
T Consensus 301 ~l~~~----------~~~~~~~l~~~gI~v~~ 322 (352)
T PRK03321 301 PLGER----------TADFAAAAAEAGVVVRP 322 (352)
T ss_pred eCCCC----------HHHHHHHHHHCCEEEEc
Confidence 87311 35788899999999864
No 145
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.82 E-value=2.1e-18 Score=176.13 Aligned_cols=310 Identities=15% Similarity=0.114 Sum_probs=186.1
Q ss_pred CCeEEEecCCcccc--cCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCC-----CCCceEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATV--CCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMP-----GNLKVVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~--~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~-----~~~~~v~~~~sGse 169 (447)
|+.+++|..|.... .++ .++.+.+++.+.+... +. ..| +.....+|.+.+++++. ...++|++++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~-~~-~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~ 106 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSG-KY-NGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSH 106 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhcc-CC-CCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHH
Confidence 46778888776532 344 5688999988877652 11 123 34445667777776653 34567999999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
|+..++..... +++.|++.+++|......+... |+..++.+......++.| .+.+++.+..
T Consensus 107 al~~~~~~l~~--~gd~v~i~~P~y~~~~~~~~~~-------------g~~v~~~~~~~~~~~~~d----~~~l~~~~~~ 167 (401)
T TIGR01264 107 AIEMCIAALAN--AGQNILVPRPGFPLYETLAESM-------------GIEVKLYNLLPDKSWEID----LKQLESLIDE 167 (401)
T ss_pred HHHHHHHHhCC--CCCEEEEeCCCChhHHHHHHHc-------------CCEEEEeecCCccCCCCC----HHHHHHHhcc
Confidence 99999985532 5678999999997554333221 233323222111223344 4566665542
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC--EE---Eeec
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD--IV---TMAK 324 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD--iv---t~sK 324 (447)
+..+.++..| ++++|.+. +.+.+++|.++|+++|+++|+||+|.+|...|..+..+. ...++ ++ +|||
T Consensus 168 ---~~~~v~~~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~--~~~~~~~vi~~~SfSK 240 (401)
T TIGR01264 168 ---KTAALIVNNP-SNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLA--SLSSTVPILSCGGLAK 240 (401)
T ss_pred ---CceEEEEcCC-CCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHH--HcCCCCcEEEEccCcc
Confidence 1223344455 55667654 678899999999999999999999998865552121211 12232 33 6999
Q ss_pred ccc-CCccccccccCH------HHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHH
Q 013235 325 GIG-NGIPLGAVVTTP------EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTA 393 (447)
Q Consensus 325 ~lg-~G~pigav~~~~------~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~ 393 (447)
.++ .|+|+|++++++ ++++.+.... ..+++.|++++.++.+.|+.- .+++. +.+++..+++.+.|+
T Consensus 241 ~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~l~~~~~~~~~~r~~l~~~L~- 317 (401)
T TIGR01264 241 RWLVPGWRLGWIIIHDRRGILRDIRDGLVKLS-QRILGPCTIVQGALPSILLRT-PQEYFDGTLSVLESNAMLCYGALA- 317 (401)
T ss_pred cCCCccceEEEEEecCcchhHHHHHHHHHHHh-hccCCCCcHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 966 799999999863 3444333211 124566788888887777531 12333 333333334444443
Q ss_pred HHHhcCCee-eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 394 LKDKYGIIG-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 394 l~~~~~~i~-~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
+++.+. ..+..|+++++++.... .|......++++.|+ ++||++.+
T Consensus 318 ---~~~~~~~~~p~~g~f~~~~~~~~~---~~~~~~~~~~~~~l~~~~gI~v~p 365 (401)
T TIGR01264 318 ---AVPGLRPVMPSGAMYMMVGIEMEH---FPEFKNDVEFTERLVAEQSVFCLP 365 (401)
T ss_pred ---hCCCCcccCCCeeeEEEEEecccc---cCCCCCHHHHHHHHHHhCCEEEeC
Confidence 332222 23556999999985310 011011356777876 78999875
No 146
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.82 E-value=2.8e-18 Score=174.27 Aligned_cols=305 Identities=13% Similarity=0.077 Sum_probs=181.0
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhC----C--CCCc-eEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKM----P--GNLK-VVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~----~--~~~~-~v~~~~sGse 169 (447)
|..++|+..|... ++ .++.+.+++.+.+.... ...|+.+ ...+|.+.+++++ + .+.+ .|++++++++
T Consensus 30 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~ 104 (385)
T PRK09276 30 GVDVISLGIGDPD--LP-TPDHIIEAMCKAVEDPE--NHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE 104 (385)
T ss_pred CCCEEEecCCCCC--CC-CCHHHHHHHHHHHhCCC--CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 4557888887653 33 56788998888776421 1223322 2345555555543 2 2233 5888999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
++..+++... ..++.|++.+++|.+....+... |...+..|......|..| .+++++.+.
T Consensus 105 ~i~~~~~~~~--~~gd~Vl~~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~g~~~d----~~~l~~~~~- 164 (385)
T PRK09276 105 GIAHIPLAFV--NPGDVVLVPDPGYPVYKIGTIFA-------------GGEPYFMPLKEENGFLPD----LDAIPEDVA- 164 (385)
T ss_pred HHHHHHHHhC--CCCCEEEEcCCCCcChHHHHHHc-------------CCEEEEEecCCCCCCcCC----HHHHHHhcc-
Confidence 9999987653 35688999999997665543322 222222222111122223 445555443
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC---cccccc-cCCCCCEEEeecc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH---FWGFEA-HGVVPDIVTMAKG 325 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~---~~~~~~-~gv~pDivt~sK~ 325 (447)
. ++.++++...++++|.+. +.+.+++|.++|++||+++|+||+|..|...|.. +..++. .+....+.+|||.
T Consensus 165 --~-~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 240 (385)
T PRK09276 165 --K-KAKLMFINYPNNPTGAVA-DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKT 240 (385)
T ss_pred --c-cceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhh
Confidence 2 344555553356677765 7888999999999999999999999887543311 111111 1222334479999
Q ss_pred cc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHH----HHHHHHHHHHHHHHHHHHhcCC
Q 013235 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQN----NAHVVGSYLKERLTALKDKYGI 400 (447)
Q Consensus 326 lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~ 400 (447)
+| .|+++|++++++++++.+.........+.+++...++.+.|+. .+.+.+ .+++..+++.+.|++ +++
T Consensus 241 ~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~----~~~ 314 (385)
T PRK09276 241 YNMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG--PQEVVEELRKIYQERRDILVEGLRK----LGL 314 (385)
T ss_pred cCCcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHh----CCC
Confidence 97 7999999999999998876532222334556666677666642 123333 333334444444433 332
Q ss_pred eeeEe-ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 401 IGDVR-GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 401 i~~vr-g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
.-.. ..|+++++++.+. ....+++++|+ ++||++.+.
T Consensus 315 -~~~~~~~~~~~~v~~~~~--------~~~~~l~~~ll~~~gi~v~~g 353 (385)
T PRK09276 315 -EVEPPKATFYVWAPVPKG--------YTSAEFATLLLDKAGVVVTPG 353 (385)
T ss_pred -cccCCCcceEEEEECCCC--------CCHHHHHHHHHHhCCEEECCc
Confidence 2122 2366678877321 11356888876 579998753
No 147
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.82 E-value=5e-18 Score=173.07 Aligned_cols=306 Identities=12% Similarity=0.043 Sum_probs=183.3
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc-ccccccchHHHHHHHHHHHhCC---CCC-ceEEEcCCHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYLNHAIADFAEALASKMP---GNL-KVVFFTNSGTEAN 171 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~elae~L~~~~~---~~~-~~v~~~~sGseA~ 171 (447)
.|+.+|||..|... ++ .++.+.+++.+.+..... ....+..+....+++.+.+..+ .+. ++|++++++++|+
T Consensus 27 ~~~~~i~l~~~~p~--~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGEPK--HP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCCCC--CC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 47889999887763 44 467888888776653311 1111122333444444444433 233 4799999999999
Q ss_pred HHHHHHHHhh-cCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 172 ELAIMMARLY-TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 172 e~Aik~ar~~-t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
..+++....- ..++.|++.+++|.+....+... |...++.|......|+.| .+++++.+..
T Consensus 104 ~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~vp~~~~~~~~~d----~~~l~~~~~~- 165 (396)
T PRK09147 104 FAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLA-------------GAEPYFLNCDPANNFAPD----FDAVPAEVWA- 165 (396)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhc-------------CCEEEEeccCccccCccC----HHHHHHHHhh-
Confidence 9988854321 11567999999997665443322 333333333222234444 4556554432
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC-Cccc-cc---ccCC--CCCEE---
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS-HFWG-FE---AHGV--VPDIV--- 320 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~-~~~~-~~---~~gv--~pDiv--- 320 (447)
+..+.+++.| ++++|.+. +++.+++|.++|++|+++||.||+|..|...+. .... .. ..+. .+.++
T Consensus 166 --~~k~i~l~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 241 (396)
T PRK09147 166 --RTQLLFVCSP-GNPTGAVL-PLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFH 241 (396)
T ss_pred --ccEEEEEcCC-CCCcCccC-CHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEe
Confidence 1234444555 66667665 788999999999999999999999988754331 1111 11 1111 12233
Q ss_pred Eeecccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHH----HHHHHHHHHHHHHHHH
Q 013235 321 TMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNN----AHVVGSYLKERLTALK 395 (447)
Q Consensus 321 t~sK~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~----~~~~g~~l~~~L~~l~ 395 (447)
+|||.++ .|+++||+++++++++.+.......+++.+++.+.++.+.+. ++++.++ +++..+.+.+.|++
T Consensus 242 S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~-- 316 (396)
T PRK09147 242 SLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWN---DEAHVRENRALYREKFDAVTPILAP-- 316 (396)
T ss_pred ccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHHHH--
Confidence 6999876 699999999999999877643333556778888888777763 2222222 22222233333322
Q ss_pred HhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 396 DKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 396 ~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
+ .....+..|+++++++.. . ..++++.|+ ++||++.+
T Consensus 317 --~-~~~~~p~~g~f~~~~~~~------~----~~~~~~~ll~~~gv~v~p 354 (396)
T PRK09147 317 --V-LDVQLPDAGFYLWAKVPG------D----DTEFARRLYADYNVTVLP 354 (396)
T ss_pred --h-cCCCCCCeeEEEEEECCC------C----HHHHHHHHHHhCCEEEeC
Confidence 2 111235568999998731 1 245777775 67998864
No 148
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.82 E-value=2.6e-18 Score=176.08 Aligned_cols=322 Identities=12% Similarity=0.036 Sum_probs=191.7
Q ss_pred EEEecCCCeEEEecCCccccc--CCCCCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhCC------------C
Q 013235 92 YLFDENGRRYLDAFGGIATVC--CGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKMP------------G 156 (447)
Q Consensus 92 ~l~d~dG~~ylD~~~g~~~~~--lGh~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~~------------~ 156 (447)
++.+..|+.+|||..|..... +- .++.+.+++.+.++.. ....|+.+ ...+|.+.|++++. .
T Consensus 26 ~~~~~~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~ 102 (412)
T PTZ00433 26 AKPSPSPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQ--ECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTI 102 (412)
T ss_pred hccCCCCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcC--CCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCC
Confidence 345578899999998876421 23 4678999888877642 11234433 35566666666542 3
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCCh
Q 013235 157 NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADG 236 (447)
Q Consensus 157 ~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~ 236 (447)
+.++|++++++++|+..+++... .+++.|++..++|......+... |+..+..|......|+.|
T Consensus 103 ~~~~i~it~G~~~al~~~~~~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d- 166 (412)
T PTZ00433 103 KKDNVVLCSGVSHAILMALTALC--DEGDNILVPAPGFPHYETVCKAY-------------GIEMRFYNCRPEKDWEAD- 166 (412)
T ss_pred ChhhEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCcccHHHHHHHc-------------CCEEEEEecCccccCcCC-
Confidence 45789999999999999998653 25678999999998765443222 222222222111223334
Q ss_pred HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCC
Q 013235 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVV 316 (447)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~ 316 (447)
.+++++.+.. +..+.++..| ++++|.+. +.+-+++|.++|++||+++|+||+|..|-..+..+.....+.-.
T Consensus 167 ---~~~l~~~~~~---~~~~i~~~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 238 (412)
T PTZ00433 167 ---LDEIRRLVDD---RTKALIMTNP-SNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTT 238 (412)
T ss_pred ---HHHHHHHhcc---CceEEEEeCC-CCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCC
Confidence 4566665542 2223444455 56677655 67889999999999999999999999885544222222112111
Q ss_pred CCEE---Eeecccc-CCcccccccc------CHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 013235 317 PDIV---TMAKGIG-NGIPLGAVVT------TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSY 386 (447)
Q Consensus 317 pDiv---t~sK~lg-~G~pigav~~------~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~ 386 (447)
.+++ +|||.++ .|+++||+++ .+++++.+.... ..+++.|++++.++.+.|+.- .+.+.++.++.-+.
T Consensus 239 ~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~ 316 (412)
T PTZ00433 239 VPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEE 316 (412)
T ss_pred CceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHH
Confidence 1233 5899996 7999999996 245666654321 234677888888888777521 12333333322222
Q ss_pred HHHHHHHHHHhcCCeeeE-eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 387 LKERLTALKDKYGIIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 387 l~~~L~~l~~~~~~i~~v-rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
-++.|.+..+++..+.-+ +..|+++++++....-.... ...++++.|+ ++||++.+
T Consensus 317 ~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~---~~~~~~~~ll~~~gV~v~p 374 (412)
T PTZ00433 317 GAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIK---SDVEFYEKLLEEENVQVLP 374 (412)
T ss_pred HHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCC---CHHHHHHHHHHhcCEEEeC
Confidence 233333333333222222 34488899887421000000 1356888887 47999875
No 149
>PRK09105 putative aminotransferase; Provisional
Probab=99.82 E-value=2.5e-18 Score=173.73 Aligned_cols=293 Identities=15% Similarity=0.109 Sum_probs=185.9
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
+.++|+..|.. +++ .+|.+.+++.+.+... ..|+.+...+|.+.+++.+..+.++|++++++++++..++...
T Consensus 43 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~----~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 43 EGAVFLNANEC--PLG-PSPAARDAAARSAALS----GRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CCcEEecCCCC--CCC-CCHHHHHHHHHHHHHh----cCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH
Confidence 45667666654 456 6789999998876543 2356556789999999998777789999999999999998754
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
. ..+++|++.+++|.+....+... |...+..|... .|..| .+++++. .++....+
T Consensus 116 ~--~~gd~Vli~~P~y~~~~~~~~~~-------------g~~~~~v~~~~--~~~~d----~~~l~~~----~~~~~~v~ 170 (370)
T PRK09105 116 T--SPTAGLVTADPTYEAGWRAADAQ-------------GAPVAKVPLRA--DGAHD----VKAMLAA----DPNAGLIY 170 (370)
T ss_pred c--CCCCEEEEeCCChHHHHHHHHHc-------------CCeEEEecCCC--CCCCC----HHHHHhc----CCCCCEEE
Confidence 2 35678999999997665443322 22233332211 22233 3444433 12234456
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGA 334 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~piga 334 (447)
+++| ++++|.+. +.+.++++.+.|+ +|+++|+||+|..|+... .. .+..+..++++ +|||.+| .|+|+|+
T Consensus 171 l~nP-~NPTG~~~-~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~-s~--~~~~~~~~~vi~~~SfSK~~g~~GlRiG~ 244 (370)
T PRK09105 171 ICNP-NNPTGTVT-PRADIEWLLANKP-AGSVLLVDEAYIHFSDAP-SV--VDLVAQRKDLIVLRTFSKLYGMAGMRLGL 244 (370)
T ss_pred EeCC-CCCCCcCc-CHHHHHHHHHhCC-CCcEEEEECchHHhccCc-ch--HHHHhhCCCEEEEecccHhhcCCccceee
Confidence 6777 56667665 6667777777654 599999999998775311 11 12223345655 5899998 7999999
Q ss_pred cccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEE
Q 013235 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (447)
Q Consensus 335 v~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gie 414 (447)
+++++++++.+... ..+..+..++.++.++|+ ++++.+..++.-+..++.+.+..++++. .-++..|.|+.++
T Consensus 245 ~v~~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~~f~~~~ 317 (370)
T PRK09105 245 AAARPDLLAKLARF---GHNPLPVPAAAAGLASLR---DPKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQANCFMVD 317 (370)
T ss_pred eecCHHHHHHHHhc---CCCCcCHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCCcEEEEe
Confidence 99999999887643 334466677777777774 2344433333333333334333333332 2234566676665
Q ss_pred EeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 415 FVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 415 l~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
+.. ...++++.|+++||+++..
T Consensus 318 ~~~----------~~~~l~~~L~~~gI~v~~~ 339 (370)
T PRK09105 318 VKR----------PAKAVADAMAKQGVFIGRS 339 (370)
T ss_pred CCC----------CHHHHHHHHHHCCcEEecC
Confidence 521 1357889999999998643
No 150
>PRK09082 methionine aminotransferase; Validated
Probab=99.82 E-value=3.2e-18 Score=173.93 Aligned_cols=307 Identities=13% Similarity=0.094 Sum_probs=187.7
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc--ccccccchHHHHHHHHHHHhCCCC--C-ceEEEcCCHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH--STVLYLNHAIADFAEALASKMPGN--L-KVVFFTNSGTEANEL 173 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~elae~L~~~~~~~--~-~~v~~~~sGseA~e~ 173 (447)
+.+|||..|... ++ .+|.+.+++.+.+..... ....+..+...++++.+.+.+... . +++++++++++|+..
T Consensus 30 ~~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGFPD--FD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 357899887653 33 478899988887654211 111122344556666666655432 2 368999999999999
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 174 Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
+++... .+++.|++.+++|.+........ |...+..|.... .|+.| .+++++.+. +
T Consensus 107 ~~~~~~--~~gd~Vli~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~-~~~~d----~~~l~~~~~---~- 162 (386)
T PRK09082 107 AILALV--RPGDEVIVFDPSYDSYAPAIELA-------------GGRAVRVALQPP-DFRVD----WQRFAAAIS---P- 162 (386)
T ss_pred HHHHHc--CCCCEEEEeCCCchhhHHHHHHc-------------CCEEEEEecCcc-cccCC----HHHHHHhcC---c-
Confidence 997543 35678999999887654333221 222222222111 13334 456666654 2
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEE---Eeecccc-C
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIV---TMAKGIG-N 328 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDiv---t~sK~lg-~ 328 (447)
++.++++...++++|.+. +++.+++|.++|++||+++|+||+|..+-..+...-.. +..+..+.++ +|||.+| .
T Consensus 163 ~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 163 RTRLIILNTPHNPSGTVW-SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVT 241 (386)
T ss_pred cceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccch
Confidence 345555555567777665 67789999999999999999999998765433211111 2222223333 6899997 7
Q ss_pred CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcCCeeeE
Q 013235 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYGIIGDV 404 (447)
Q Consensus 329 G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~i~~v 404 (447)
|+|+|++++++++++.+........++.+++++.++.+.|+. .++.. +.+++..+.+.+.|++ +++....
T Consensus 242 G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~ 315 (386)
T PRK09082 242 GWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA--EPEHYLELPAFYQAKRDRFRAALAN----SRFKLLP 315 (386)
T ss_pred hhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHh----CCCcccC
Confidence 999999999999998877644446677888888877666642 22223 3334444455554444 3321112
Q ss_pred eecceeEEEEEeeCCCCCCCCHHHHHHHHHHH-HhCCceeec
Q 013235 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KGICALFFS 445 (447)
Q Consensus 405 rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l-~~~Gvlv~~ 445 (447)
...|+++++++.+-.. . ...++++.| .+.||++.+
T Consensus 316 ~~g~~~~~~~~~~~~~---~---~~~~~~~~l~~~~~v~v~p 351 (386)
T PRK09082 316 CEGTYFQLVDYSAISD---L---DDVEFCQWLTREHGVAAIP 351 (386)
T ss_pred CCeeEEEEEeccccCC---C---CHHHHHHHHHHhCCEEEeC
Confidence 3347788888742100 1 135677776 577998865
No 151
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=2e-18 Score=172.12 Aligned_cols=294 Identities=13% Similarity=0.154 Sum_probs=188.9
Q ss_pred eecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCC---CCCceEEE
Q 013235 87 DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP---GNLKVVFF 163 (447)
Q Consensus 87 ~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~---~~~~~v~~ 163 (447)
+++|.+-+...|+..||+..|.. .++ .+|.+++++.+.+... ....|+.+...+|.+.+++++. .+.++|++
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~~--~~~-~p~~~~~~~~~~~~~~--~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~i 81 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNEN--PFP-FPEDLVDEVFRRLNSD--TLRIYYDSPDEELIEKILSYLDTDFLSKNNVSV 81 (335)
T ss_pred hhccCcCCCCCCCceeEecCCCC--CCC-CCHHHHHHHHHHhhhh--hhhcCCCCChHHHHHHHHHHhCCCCCCcceEEE
Confidence 45666666778899999988765 566 6789999998876542 1233555667889999998875 45678999
Q ss_pred cCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHH
Q 013235 164 TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDV 243 (447)
Q Consensus 164 ~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~l 243 (447)
+++++|++..+++.. +.|++.+++|.+....+... |...+..|... .+..+ +.
T Consensus 82 t~Ga~~~i~~~~~~~------d~v~v~~P~y~~~~~~~~~~-------------g~~~~~v~~~~--~~~~~------~~ 134 (335)
T PRK14808 82 GNGADEIIYVMMLMF------DRSVFFPPTYSCYRIFAKAV-------------GAKFLEVPLTK--DLRIP------EV 134 (335)
T ss_pred cCCHHHHHHHHHHHh------CcEEECCCCHHHHHHHHHHc-------------CCeEEEecCCC--cCCCC------hh
Confidence 999999999998743 56899999998776655443 22333333211 11111 11
Q ss_pred HHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc-ccccCCCCCEE--
Q 013235 244 QDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIV-- 320 (447)
Q Consensus 244 e~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~-~~~~gv~pDiv-- 320 (447)
. +. + ....++..|.+ ++|.+.. .+++.+++ ++++++|+||+|..|. +..+.. .+.+ +.++
T Consensus 135 -~-~~---~-~~~i~i~nP~N-PTG~~~s----~~~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~---~~vi~~ 197 (335)
T PRK14808 135 -N-VG---E-GDVVFIPNPNN-PTGHVFE----REEIERIL-KTGAFVALDEAYYEFH--GESYVDLLKKY---ENLAVI 197 (335)
T ss_pred -H-cc---C-CCEEEEeCCCC-CCCCCcC----HHHHHHHH-hcCCEEEEECchhhhc--CCchHHHHHhC---CCEEEE
Confidence 1 11 1 23455555554 4555554 44556666 5899999999999884 212221 1222 3444
Q ss_pred -Eeecccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 013235 321 -TMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY 398 (447)
Q Consensus 321 -t~sK~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~ 398 (447)
+|||.++ .|+|+|++++++++++.+.... .+++.+.++..++.++|+.. +.+.++.+...+. ++.+.+..+++
T Consensus 198 ~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~ 272 (335)
T PRK14808 198 RTFSKAFSLAAQRIGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHR--EIFEERTKFIVEE-RERMKSALREM 272 (335)
T ss_pred EechhhccCcccceEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCH--HHHHHHHHHHHHH-HHHHHHHHHHC
Confidence 6999999 8999999999999999886433 35677888888888887632 1222222222222 33343333334
Q ss_pred CCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 399 GIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 399 ~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+ +.-..+.|.|+++++... ...++.+.|+++||+|+
T Consensus 273 g-~~~~~~~g~f~~~~l~~~---------~~~~~~~~l~~~Gi~V~ 308 (335)
T PRK14808 273 G-YRITDSRGNFVFIFMEKE---------EKERLLEHLRAKNIAVR 308 (335)
T ss_pred C-CEECCCCCeEEEEeCCCc---------cHHHHHHHHHHCCeEEE
Confidence 4 333456899998887421 13568889999999987
No 152
>PRK07777 aminotransferase; Validated
Probab=99.82 E-value=7.9e-18 Score=171.08 Aligned_cols=306 Identities=15% Similarity=0.137 Sum_probs=185.2
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHH----hCCC--CCc-eEEEcCCHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALAS----KMPG--NLK-VVFFTNSGTEAN 171 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~----~~~~--~~~-~v~~~~sGseA~ 171 (447)
..+||..|..... .++.+.+++.+.+... ...|. .....+|.+.+++ .++. ..+ +|++++||++|+
T Consensus 25 ~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 98 (387)
T PRK07777 25 GAVNLGQGFPDED---GPPEMLEAAQEAIAGG---VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAI 98 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence 5688888876442 3567788777766542 12233 2234455555554 3332 233 699999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcC-CCCCCChHHHHHHHHHHHHcc
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYR-GVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~-~~~~~d~~~~~~~le~~i~~~ 250 (447)
.+++... ..+++.|++..++|++........ |...+..|.... ..|..| .+++++.+..
T Consensus 99 ~~~~~~~--~~~gd~vli~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~~d----~~~l~~~~~~- 158 (387)
T PRK07777 99 AAAVLGL--VEPGDEVLLIEPYYDSYAAVIAMA-------------GAHRVPVPLVPDGRGFALD----LDALRAAVTP- 158 (387)
T ss_pred HHHHHHh--cCCCCEEEEeCCCchhhHHHHHHC-------------CCEEEEeecCCccCCCcCC----HHHHHHhcCc-
Confidence 9988743 235678999999998765333221 222222221111 123234 4566665532
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccccc-CCCC-CEE--Eeeccc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GVVP-DIV--TMAKGI 326 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~-gv~p-Div--t~sK~l 326 (447)
++.+|++...++++|.+. +++.+++|.++|++|++++|+||+|.+|...+.....+..+ +... +++ +|||.+
T Consensus 159 ---~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 234 (387)
T PRK07777 159 ---RTRALIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTF 234 (387)
T ss_pred ---ccEEEEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhc
Confidence 455666666678888766 67889999999999999999999998876544222122211 2111 232 699999
Q ss_pred c-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 013235 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ--KDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (447)
Q Consensus 327 g-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 403 (447)
| .|+++|++++++++++.+.......++..++..+.++...|+.-+ .+.+.+.++++.+++.+.|+++ +.-..
T Consensus 235 g~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~ 310 (387)
T PRK07777 235 NVTGWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA----GFEVH 310 (387)
T ss_pred cCcCceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC----CCCcc
Confidence 8 799999999999998877654444566666666656555564211 1223455566666666666553 21111
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
....|+++++++...+. . ...+++++|+ ++||++.+
T Consensus 311 ~~~g~~~~~~~~~~~~~---~---~~~~~~~~l~~~~gv~v~p 347 (387)
T PRK07777 311 DSAGTYFLCADPRPLGY---D---DGTEFCRALPERVGVAAIP 347 (387)
T ss_pred CCCcceEEEecccccCC---C---CHHHHHHHHHHhCCEEEeC
Confidence 12235677777632110 0 1357888886 57999865
No 153
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.82 E-value=2.9e-18 Score=176.83 Aligned_cols=296 Identities=14% Similarity=0.059 Sum_probs=183.9
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhCC---CCCceEEEcCCHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKMP---GNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~~---~~~~~v~~~~sGseA~e~Ai 175 (447)
..+||..|... .-..|.+.+++.+..... ..|.. ....+|.+.+++++. ...++|++++++++|+..++
T Consensus 86 ~~i~L~~g~p~---~~~~p~~~~~~~~~~~~~----~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~ 158 (431)
T PRK15481 86 PLHDLAGGNPD---PQRLPDLSRYFARLSRTP----RLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLL 158 (431)
T ss_pred hhhhhhcCCCC---hhHhHHHHHHHHHhhhhh----hhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHH
Confidence 35666555321 112356666666544332 12332 224566667766653 12357999999999999999
Q ss_pred HHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCe
Q 013235 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV 255 (447)
Q Consensus 176 k~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~ 255 (447)
+.... +++.|++.+++|.+....+... |...++.|.... +.| .+++++.+.. ++
T Consensus 159 ~~l~~--pgd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~---g~~----~~~l~~~~~~----~~ 212 (431)
T PRK15481 159 CAHLL--PGDSVAVEDPCFLSSINMLRYA-------------GFSASPVSVDAE---GMQ----PEKLERALAQ----GA 212 (431)
T ss_pred HHhCC--CCCEEEEeCCCcHHHHHHHHHc-------------CCeEEeeccCCC---CCC----HHHHHHHHhc----CC
Confidence 85432 5688999999998776554433 222233222111 123 5677777653 34
Q ss_pred EEEEEcc-ccCCCceeeCCCChHHHHHHHHHHh-CCEEEEeccccCccccCCCcccccccCCCCCEE---EeeccccCCc
Q 013235 256 AGFLSES-IQGVGGIIELAPGYLPAVYKSIKKA-GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIGNGI 330 (447)
Q Consensus 256 aavi~Ep-i~~~gG~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg~G~ 330 (447)
.++++-| .++++|.+. +++.+++|.++|++| ++++|.||+|..|...+ ..-.... ..+.++ +|||.++.|+
T Consensus 213 k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~-~~~~~~~--~~~~vi~~~SfSK~~~~Gl 288 (431)
T PRK15481 213 RAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSP-YHSVIPQ--TTQRWALIRSVSKALGPDL 288 (431)
T ss_pred CEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCC-CCCCCcC--CCCCEEEEeeeccccCCCc
Confidence 4555554 455667665 788899999999999 99999999999885333 1111111 123444 6999999999
Q ss_pred cccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH---HHHHHHhcCCeeeEeec
Q 013235 331 PLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKER---LTALKDKYGIIGDVRGR 407 (447)
Q Consensus 331 pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~---L~~l~~~~~~i~~vrg~ 407 (447)
++||+++++++++.+.......+++.|.+++.++.+.|+ +..+.++++++.+.++++ +.+..+++++....+..
T Consensus 289 RiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~g 365 (431)
T PRK15481 289 RLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLT---DPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGD 365 (431)
T ss_pred eeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHh---CccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence 999999999998887643333446678888888888875 333333333333333333 22222333332224667
Q ss_pred ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 408 Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
|+++++++..+ ..++++.|.++||++.+
T Consensus 366 g~f~~~~l~~~----------~~~~~~~l~~~gV~v~p 393 (431)
T PRK15481 366 GLNLWLPLDTD----------SQATALTLAKSGWLVRE 393 (431)
T ss_pred eEEEEEECCCC----------HHHHHHHHHHCCcEEec
Confidence 99999988321 35678888999999976
No 154
>PRK12414 putative aminotransferase; Provisional
Probab=99.82 E-value=7.6e-18 Score=171.06 Aligned_cols=307 Identities=12% Similarity=0.086 Sum_probs=186.1
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhc--ccccccccchHHHHHHHHHHHhCCCC---CceEEEcCCHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI--QHSTVLYLNHAIADFAEALASKMPGN---LKVVFFTNSGTEANELA 174 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~--~~~~~~~~~~~~~elae~L~~~~~~~---~~~v~~~~sGseA~e~A 174 (447)
.+|||..|.. .++ .++.+.+++.+.+... .+....+..+...++++.+++.++.. .+++++++++++|+..+
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 30 DALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred CeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 4688887775 344 4788999888766542 11111122344556666666655432 24699999999999999
Q ss_pred HHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCC
Q 013235 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (447)
Q Consensus 175 ik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (447)
++... .+++.|++.+++|.+........ |...+..|... ..|..| .+++++.+. + +
T Consensus 107 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~~-~~~~~d----~~~l~~~l~---~-~ 162 (384)
T PRK12414 107 ISALV--HPGDEVIYFEPSFDSYAPIVRLQ-------------GATPVAIKLSP-EDFRVN----WDEVAAAIT---P-R 162 (384)
T ss_pred HHHhc--CCCCEEEEeCCCccchHHHHHHc-------------CCEEEEEecCc-cccccC----HHHHHhhcC---c-c
Confidence 87542 36688999999997654433322 22222222111 112233 456666553 2 4
Q ss_pred eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEE---Eeecccc-CC
Q 013235 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIV---TMAKGIG-NG 329 (447)
Q Consensus 255 ~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDiv---t~sK~lg-~G 329 (447)
+.++++...++++|.+. +++.+++|.++|++||+++|+||+|..|...|...-.+ ...+....++ +|||.++ .|
T Consensus 163 ~~~v~i~~p~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG 241 (384)
T PRK12414 163 TRMIIVNTPHNPSATVF-SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG 241 (384)
T ss_pred cEEEEEcCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc
Confidence 45555554567777765 67889999999999999999999998765444211111 1112222333 5999997 89
Q ss_pred ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEee-c
Q 013235 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG-R 407 (447)
Q Consensus 330 ~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg-~ 407 (447)
+++||+++++++++.+.......+++.|.+++.++.+.|+.-. ..++.+.+++..+.+.+.|++ ++ +.-.+. .
T Consensus 242 lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g-~~~~~~~g 316 (384)
T PRK12414 242 WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SR-FELLPSEG 316 (384)
T ss_pred ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CC-CeecCCCc
Confidence 9999999999998887654444677888888888877774200 012334444455555554444 33 222333 4
Q ss_pred ceeEEEEEeeCCCCCCCCHHHHHHHH-HHHHhCCceeec
Q 013235 408 GFLLGVEFVTDRQLKTPAKAETLYIM-DKMKGICALFFS 445 (447)
Q Consensus 408 Gl~~giel~~~~~~~~p~~~~~~~~~-~~l~~~Gvlv~~ 445 (447)
|+++++++..-. .. ...+++ +.|.++||.+.+
T Consensus 317 g~~~~~~~~~~~-----~~-~~~~~~~~~l~~~gV~v~p 349 (384)
T PRK12414 317 SFFMLARFRHFS-----DE-SDSDFVLRLIRDARVATIP 349 (384)
T ss_pred ceEEEEcccccC-----CC-CHHHHHHHHHHhCCEEEec
Confidence 567777763210 00 123444 456688999875
No 155
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=6.8e-18 Score=169.36 Aligned_cols=292 Identities=15% Similarity=0.115 Sum_probs=188.4
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
..+||..|.. .++ .+|.+.+++.+.+... ....|+.+...+|++.++++++...++|++++++++++..+++..
T Consensus 23 ~~~~l~~~~~--~~~-~p~~~~~a~~~~~~~~--~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l- 96 (351)
T PRK14807 23 YKYKMDANET--PFE-LPEEVIKNIQEIVKSS--QVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF- 96 (351)
T ss_pred ceeEccCCCC--CCC-CCHHHHHHHHHHhhcC--cccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh-
Confidence 3477776665 456 6789999988877532 123455556688999999998766788999999999999888754
Q ss_pred hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEE
Q 013235 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (447)
Q Consensus 180 ~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi 259 (447)
..+++.|++.+++|.+....+... |...+..+.. ..|+.| .+++++.+.. .++.+++
T Consensus 97 -~~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~~~~~~---~~~k~v~ 153 (351)
T PRK14807 97 -INKGDVVIYPHPSFAMYSVYSKIA-------------GAVEIPVKLK--EDYTYD----VGSFIKVIEK---YQPKLVF 153 (351)
T ss_pred -cCCCCEEEEeCCChHHHHHHHHHc-------------CCeEEEeecC--CCCCCC----HHHHHHHhhc---cCCCEEE
Confidence 235678999999997544332221 2222222221 113334 4667666642 2445555
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcccccc
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGAV 335 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pigav 335 (447)
+...++++|.+.+ .+++.++|++++.++|+||+|.+|. +.... ...+..+.++ +|||.++ .|+|+||+
T Consensus 154 l~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~--~~~~~~~~vi~~~S~SK~~~~~GlRiG~~ 225 (351)
T PRK14807 154 LCNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIV--DVINEFENLIVLRTLSKAFGLAGLRVGYA 225 (351)
T ss_pred EeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchH--HHhhhCCCEEEEecchHhcccchhceeee
Confidence 5555777888776 7888888989889999999998773 31111 1111223444 5899998 89999999
Q ss_pred ccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEE
Q 013235 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415 (447)
Q Consensus 336 ~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel 415 (447)
++++++++.+.... ..+..+++++.++.+.|+.-.-++..+.+++..+++.+.|+ +++.+.-.++.|.++++.+
T Consensus 226 v~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~----~~~g~~~~~~~~~~~~i~~ 299 (351)
T PRK14807 226 VANENILKYLNLVK--SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELS----KIPGIKVYPSKTNFILVKF 299 (351)
T ss_pred ecCHHHHHHHHHcc--CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----hCCCcEECcCCccEEEEEc
Confidence 99999998886432 23556788888887777521111222333334444444443 3322333455688888877
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 416 VTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 416 ~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+ ..++.+.|+++||++..
T Consensus 300 ~~-----------~~~~~~~l~~~gV~v~~ 318 (351)
T PRK14807 300 KD-----------ADYVYQGLLERGILVRD 318 (351)
T ss_pred CC-----------HHHHHHHHHHCCEEEEE
Confidence 31 35688889999999853
No 156
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.81 E-value=5.1e-18 Score=169.56 Aligned_cols=271 Identities=9% Similarity=0.019 Sum_probs=176.4
Q ss_pred CCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEE--cCC
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL--RNA 193 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~--~~~ 193 (447)
+||+|.+|..+.+++++ +..+.+.+|+++|+++++.+.+.++++|||++||..++.... .+++.|++. +.-
T Consensus 34 ~~~~~~~~~~~~~~~~~-----g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--~~gd~Vli~~~d~p 106 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--PPGRKVVHYLPEKP 106 (346)
T ss_pred CChhHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--CCCCEEEECCCCCC
Confidence 68999999999998863 346788999999999997666889999999999999997443 245666653 223
Q ss_pred cccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCC
Q 013235 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (447)
Q Consensus 194 yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~ 273 (447)
+|........+.+. ..+.. ++ +++++. . + +..+|++++ .++.|.+. +
T Consensus 107 ~~~s~~~~~~l~ga------------~~~~~---------~~----l~~l~~----~-~-~~~lIiitg-~s~~G~v~-~ 153 (346)
T TIGR03576 107 AHPSIPRSCKLAGA------------EYFES---------DE----LSELKK----I-D-GTSLVVITG-STMDLKVV-S 153 (346)
T ss_pred CchhHHHHHHHcCC------------EEecc---------CC----HHHHhh----C-c-CceEEEEEC-CCCCCccc-C
Confidence 55544443333321 11110 12 222321 1 2 345677776 46677764 4
Q ss_pred CChHHHHHHHHHHhCCEEEEeccccCcc--ccCCCcccccccCCCCCEE--EeeccccCCccccccccCHHHHHhhcCCc
Q 013235 274 PGYLPAVYKSIKKAGGLCIADEVQAGFA--RTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRN 349 (447)
Q Consensus 274 ~~~l~~l~~l~~~~g~llI~DEv~tGfg--r~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pigav~~~~~i~~~l~~~~ 349 (447)
..-|++|.++|+++|+++|+||+|..+. ..| .. ....++ +|++ +|||+++ |+++|++++++++++.+....
T Consensus 154 ~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~-~~-~~~~~~--~divv~s~SKala-G~r~G~v~~~~~li~~l~~~~ 228 (346)
T TIGR03576 154 EEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG-QP-PALDLG--ADLVVTSTDKLMD-GPRGGLLAGRKELVDKIKSVG 228 (346)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccccccccCC-CC-CHHHcC--CcEEEeccchhcc-ccceEEEEeCHHHHHHHHHhh
Confidence 5669999999999999999999996431 112 11 112233 4665 6899764 568899999999999887654
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHH
Q 013235 350 YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAET 429 (447)
Q Consensus 350 ~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~ 429 (447)
....++.+|.++++++++|+.+..+...+.++++..++.+.+.. +.. .+..+.|+.+++... +. .
T Consensus 229 ~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~----~~~---~~~~~~f~~~~~~~~------~~--~ 293 (346)
T TIGR03576 229 EQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK----LNV---ERTPTGFVIKGVEEE------KL--I 293 (346)
T ss_pred cCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----CCC---CcCCCeEEEEeCCCC------CH--H
Confidence 33445578889999999998765455566666666666666653 221 122333666665211 11 1
Q ss_pred HHHHHHHHhCCceeecc
Q 013235 430 LYIMDKMKGICALFFSQ 446 (447)
Q Consensus 430 ~~~~~~l~~~Gvlv~~~ 446 (447)
....+.|.++||++.+.
T Consensus 294 ~~~~~ll~~~gV~v~~~ 310 (346)
T TIGR03576 294 EIGLDLLRNYGIITITA 310 (346)
T ss_pred HHHHHHHHhCCEEEeCC
Confidence 33455667889999863
No 157
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.81 E-value=3e-18 Score=172.33 Aligned_cols=309 Identities=16% Similarity=0.150 Sum_probs=190.3
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHH--hcccccccccc-hHHHHHHHHHHHhCC------CCCc-eEEEcCCHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIK--RIQHSTVLYLN-HAIADFAEALASKMP------GNLK-VVFFTNSGTE 169 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~--~~~~~~~~~~~-~~~~elae~L~~~~~------~~~~-~v~~~~sGse 169 (447)
+.|||.+|.. ..+++||.+.+++.+..+ ........|.. ....+|.+.+++++. .+.+ .++++++..+
T Consensus 2 ~~I~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAP--LLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSST--SSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCC--CCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 4788888776 445566666666655544 11122334553 457888999988875 3456 6777766666
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
++..++.+.+ ..+++.|++.+++|.+....+... |...++.|......|+.| .++|++.+++
T Consensus 80 ~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~l~~ 141 (363)
T PF00155_consen 80 ALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLL-------------GAEVIPVPLDSENDFHLD----PEALEEALDE 141 (363)
T ss_dssp HHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHT-------------TSEEEEEEEEETTTTEET----HHHHHHHHHT
T ss_pred chhhhhhccc-ccccccceecCCcccccccccccc-------------Cceeeecccccccccccc----cccccccccc
Confidence 6666665443 335678999999997665443322 222333332111233345 5677777775
Q ss_pred cCCC--CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc-ccccCCCCCEE---Eee
Q 013235 250 GTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIV---TMA 323 (447)
Q Consensus 250 ~~~~--~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~-~~~~gv~pDiv---t~s 323 (447)
...+ ++.++++...++++|... +.+.+++|.++|++||+++|+||+|.++......++. ....+-.++++ ++|
T Consensus 142 ~~~~~~~~~~v~~~~p~nPtG~~~-~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 220 (363)
T PF00155_consen 142 LPSKGPRPKAVLICNPNNPTGSVL-SLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLS 220 (363)
T ss_dssp SHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEEST
T ss_pred ccccccccceeeeccccccccccc-ccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecc
Confidence 4333 346666666677788765 7888999999999999999999999987544311211 12233344433 588
Q ss_pred cccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHh
Q 013235 324 KGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-----DKLQNNAHVVGSYLKERLTALKDK 397 (447)
Q Consensus 324 K~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~-----~~l~~~~~~~g~~l~~~L~~l~~~ 397 (447)
|.+| .|+|+|++++++++++.+... ..++..+...++++.+.|..-.. ++..+.++++.+++.+.|++.
T Consensus 221 K~~g~~GlRvG~i~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--- 295 (363)
T PF00155_consen 221 KSFGLPGLRVGYIVAPPELIERLRRF--QRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI--- 295 (363)
T ss_dssp TTTTSGGGTEEEEEEEHHHHHHHHHH--HHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ccccccccccccccchhhhhhhhhhc--cccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh---
Confidence 9998 799999999999999988743 34444477777777666654321 123333444444444444333
Q ss_pred cCCeeeEee-cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-Cceeec
Q 013235 398 YGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-CALFFS 445 (447)
Q Consensus 398 ~~~i~~vrg-~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~ 445 (447)
+. .-..+ .|.++++.+... ...++.++|+++ ||++.+
T Consensus 296 -~~-~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~~gi~v~p 334 (363)
T PF00155_consen 296 -GI-TVLPPEAGFFLWVRLDPN---------DAEELAQELLEEYGILVRP 334 (363)
T ss_dssp -TS-EEEHHSBSSEEEEEESHH---------HHHHHHHHHHHHHTEEEEE
T ss_pred -hh-heeeccCccEEEEEcccc---------hHHHHHHHHHHhCCEEEEe
Confidence 32 22222 577777776421 356799999998 999875
No 158
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.81 E-value=3e-18 Score=177.34 Aligned_cols=311 Identities=17% Similarity=0.188 Sum_probs=210.8
Q ss_pred cCCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcccc-ccccc-chHHHHHHHHHHHhC------CCCCceEEEcCC
Q 013235 96 ENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHS-TVLYL-NHAIADFAEALASKM------PGNLKVVFFTNS 166 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~-~~~~~-~~~~~elae~L~~~~------~~~~~~v~~~~s 166 (447)
.+....+||..|.... .+ ....+.+++.+.++..... ...|. .....+|.+.+++.+ ....++|+++++
T Consensus 86 ~~~~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G 163 (459)
T COG1167 86 EDDPSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSG 163 (459)
T ss_pred cCCCceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCC
Confidence 4446789998877432 22 2345555555554433221 11222 234444544444433 334568999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHH
Q 013235 167 GTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (447)
Q Consensus 167 GseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (447)
..+|++++.++... +++.|++-+++|++........ |+..++.|....+ -| .++|++.
T Consensus 164 ~q~al~l~~~~l~~--pGd~v~vE~PtY~~~~~~~~~~-------------g~~~~~vp~d~~G---~~----~e~le~~ 221 (459)
T COG1167 164 AQQALDLLLRLLLD--PGDTVLVEDPTYPGALQALEAL-------------GARVIPVPVDEDG---ID----PEALEEA 221 (459)
T ss_pred HHHHHHHHHHHhCC--CCCEEEEcCCCcHHHHHHHHHc-------------CCcEEecCCCCCC---CC----HHHHHHH
Confidence 99999988886543 6789999999999876554433 4444554443222 23 6778887
Q ss_pred HHccCCCCeEEEEEcc-ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCc---ccccccCCCCCEEEe
Q 013235 247 IDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF---WGFEAHGVVPDIVTM 322 (447)
Q Consensus 247 i~~~~~~~~aavi~Ep-i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~---~~~~~~gv~pDivt~ 322 (447)
+... ++.++++.| .|+++|.++ +.+--++|.++|++||+++|-||++..|...+... .+.+..+-+--+-+|
T Consensus 222 ~~~~---~~k~~y~~P~~qNPtG~tm-s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSF 297 (459)
T COG1167 222 LAQW---KPKAVYVTPTFQNPTGVTM-SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSF 297 (459)
T ss_pred Hhhc---CCcEEEECCCCCCCCCCcc-CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeee
Confidence 7643 678999999 888999887 67888999999999999999999999987765322 233333334445589
Q ss_pred eccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH---Hhc-
Q 013235 323 AKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK---DKY- 398 (447)
Q Consensus 323 sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~---~~~- 398 (447)
||.++.|+++||+++++++++.+....+..+.+.+.+.+.+....|. +..+.++++++.+.++++...+. +++
T Consensus 298 SK~l~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~ 374 (459)
T COG1167 298 SKTLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYL 374 (459)
T ss_pred hhhcccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999988876677778888887776655553 44566676666666655544333 333
Q ss_pred C-Ce-eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 399 G-II-GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 399 ~-~i-~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+ .+ ...+..|+++++++.+. ....++.+.++++||.+.+
T Consensus 375 ~~~~~~~~p~gG~flwl~l~~~--------~~~~~l~~~a~~~gv~i~~ 415 (459)
T COG1167 375 PELATWTRPEGGLFLWLELPEG--------IDARELLAAALEKGVVVTP 415 (459)
T ss_pred CCCeeeecCCceEEEEEEcCCC--------CCHHHHHHHHHHCCCEEEc
Confidence 2 22 23445599999999543 1256799999999998865
No 159
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.81 E-value=1.7e-17 Score=168.90 Aligned_cols=307 Identities=14% Similarity=0.119 Sum_probs=187.3
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC----CC---CCceEEEcCCHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----PG---NLKVVFFTNSGTEA 170 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~----~~---~~~~v~~~~sGseA 170 (447)
..+|||..|... ++ .++.+.+++.+.+.... ..|. .....+|.+.+++.+ +. ..++|++++++++|
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~a 103 (391)
T PRK07309 30 PGILKLTLGEPD--FT-TPDHVKEAAKRAIDANQ---SHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEA 103 (391)
T ss_pred CCeEEcCCCCCC--CC-CCHHHHHHHHHHHhcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence 458999888763 55 36788888887765421 1232 223445555555543 21 13579999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..+++... .+++.|++.+++|.+........ |...+..|... ..|..| .+++++.+...
T Consensus 104 l~~~~~~~~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~-~~~~~d----~~~l~~~~~~~ 163 (391)
T PRK07309 104 LSASLTAIL--EPGDKVLLPAPAYPGYEPIVNLV-------------GAEIVEIDTTE-NDFVLT----PEMLEKAILEQ 163 (391)
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCcchHHHHHHc-------------CCEEEEEecCC-cCCcCC----HHHHHHHhhcc
Confidence 999988542 35678999999998865433221 22222222111 112234 56677776543
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC-E-E--Eeeccc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD-I-V--TMAKGI 326 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD-i-v--t~sK~l 326 (447)
++++.++++...++++|.+. +.+.+++|.++|++||+++|+||++..|...|........+ .++ + + +|||.+
T Consensus 164 -~~~~~~i~l~~P~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~ 239 (391)
T PRK07309 164 -GDKLKAVILNYPANPTGVTY-SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILINGLSKSH 239 (391)
T ss_pred -CCCeEEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCEEEEecChhhc
Confidence 22455666553366677654 67779999999999999999999999875544222222111 223 2 2 699999
Q ss_pred c-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 013235 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ--KDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (447)
Q Consensus 327 g-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 403 (447)
| .|+++|++++++++++.+.......+.+.+++++.++.+.|+.-. ...+.++.++..+++.+.|++ +++...
T Consensus 240 g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~ 315 (391)
T PRK07309 240 AMTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD----LGFKII 315 (391)
T ss_pred cCccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH----CCCeec
Confidence 8 899999999999999887653333445677888888877775311 122334445555555555443 332222
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHH-HHhCCceeec
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK-MKGICALFFS 445 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~-l~~~Gvlv~~ 445 (447)
....|+++++++.... . ....++.+. |.++||++.+
T Consensus 316 ~p~gg~~~~~~l~~~~----~--~~~~~~~~~l~~~~gv~v~p 352 (391)
T PRK07309 316 KPDGAFYIFAKIPAGY----N--QDSFKFLQDFARKKAVAFIP 352 (391)
T ss_pred CCCeeEEEEEECCCCC----C--CCHHHHHHHHHHhCCEEEeC
Confidence 2334677777763210 0 013456765 4578999864
No 160
>PRK08175 aminotransferase; Validated
Probab=99.81 E-value=1.4e-17 Score=169.84 Aligned_cols=311 Identities=15% Similarity=0.108 Sum_probs=184.2
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhC------CCCCc-eEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM------PGNLK-VVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~------~~~~~-~v~~~~sGse 169 (447)
|+.++||..|.. .+..+|.+.+++.+.+.... ...|.. ....+|.+.+++++ +...+ ++++++++++
T Consensus 28 ~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~ 102 (395)
T PRK08175 28 GEDIIDFSMGNP---DGPTPPHIVEKLCEVAQRPD--THGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCC--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 456788877643 23346778888877664321 122332 22344555554432 22334 6889999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
++..++.... .+++.|++.+++|.......... |+..+..|....+.| .+++++++..
T Consensus 103 ~l~~~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~-------~~~l~~~l~~ 160 (395)
T PRK08175 103 GLAHLMLATL--DHGDTVLVPNPSYPIHIYGAVIA-------------GAQVRSVPLVEGVDF-------FNELERAIRE 160 (395)
T ss_pred HHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHHc-------------CCeEEEEecccCCCc-------HHHHHHHHhh
Confidence 9998776442 35678999999987654443221 233333222111111 5667777654
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC----EEEeecc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD----IVTMAKG 325 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD----ivt~sK~ 325 (447)
..+ ++.++++...++++|.+. +.+.+++|.++|++||+++|+||++..+-..|.....+-...-.+| +.+|||.
T Consensus 161 ~~~-~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 238 (395)
T PRK08175 161 SYP-KPKMMILGFPSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKS 238 (395)
T ss_pred ccC-CceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeecccc
Confidence 322 455666654466777665 7888899999999999999999999887544421111111111123 2368999
Q ss_pred cc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 326 lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
+| .|+++|++++++++++.+........++.+.+.+.++.+.|+..++ +.+.+.+++..+++.+.|++ +++..
T Consensus 239 ~g~pGlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~ 314 (395)
T PRK08175 239 YNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE----AGWMV 314 (395)
T ss_pred ccCcchhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCcc
Confidence 97 7999999999999999876543334566677777777777742111 11223333333444444443 33222
Q ss_pred eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 403 ~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
.....|+++++++.++... . ...+++++|+ +.||++.+.
T Consensus 315 ~~p~~g~~i~i~l~~~~~~--~---~~~~~~~~l~~~~gv~v~p~ 354 (395)
T PRK08175 315 EMPKASMYVWAKIPEPYAA--M---GSLEFAKKLLNEAKVCVSPG 354 (395)
T ss_pred cCCCEEEEEEEECCcccCC--C---CHHHHHHHHHHhCCEEEeCc
Confidence 2234589999998532100 0 1356777766 679998753
No 161
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.81 E-value=7.4e-18 Score=171.69 Aligned_cols=305 Identities=12% Similarity=0.030 Sum_probs=182.7
Q ss_pred ecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc-ccccccchHHHHHHHHHHHhCC----CCC-ceEEEcCCHH
Q 013235 95 DENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYLNHAIADFAEALASKMP----GNL-KVVFFTNSGT 168 (447)
Q Consensus 95 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~elae~L~~~~~----~~~-~~v~~~~sGs 168 (447)
+..|+.++||..|.. .++ .++.+.+++.+.+..... ....+..+....+++.+.+... .+. ++|+++++++
T Consensus 24 ~~~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 24 PPASKPPIALSIGEP--KHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred hhcCCCeEEecCCCC--CCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 456788899988776 344 578899998887653211 1111122333444444444322 234 4789999999
Q ss_pred HHHHHHHHHHHhhcCCC--eEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCN--DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~--~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (447)
+|+..+++.... .++ .|++.+++|.+....+... |+..+..|....+.|..| .+++++.
T Consensus 101 ~al~~~~~~l~~--~gd~~~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~ 161 (393)
T TIGR03538 101 EALFAFAQAVIN--PGQAPLVVMPNPFYQIYEGAALLA-------------GAEPYFLNCTAENGFLPD----FDAVPES 161 (393)
T ss_pred HHHHHHHHHHcC--CCCcceEEecCCCCcchHHHHHhc-------------CCeEEEeeccccCCCCCC----HHHHHHH
Confidence 999999886542 233 4888899997665433221 233333332111223334 4556655
Q ss_pred HHccCCCCeEEE-EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC-Cccc----ccccCC--CCC
Q 013235 247 IDFGTSGHVAGF-LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS-HFWG----FEAHGV--VPD 318 (447)
Q Consensus 247 i~~~~~~~~aav-i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~-~~~~----~~~~gv--~pD 318 (447)
+.. ++.++ +..| ++++|.+. +.+.+++|.++|++|++++|.||+|..|...+. .... ....+. .+.
T Consensus 162 ~~~----~~k~i~l~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (393)
T TIGR03538 162 VWR----RCQLLFVCSP-GNPTGAVL-SLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRR 235 (393)
T ss_pred Hhh----cceEEEEeCC-CCCcCccc-CHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhccccccccccc
Confidence 532 33444 4555 66677655 788999999999999999999999988754321 1111 111111 123
Q ss_pred EE---Eeecccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHH----HHHHHHHHHHHH
Q 013235 319 IV---TMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQN----NAHVVGSYLKER 390 (447)
Q Consensus 319 iv---t~sK~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~----~~~~~g~~l~~~ 390 (447)
++ +|||.++ .|+++|++++++++++.+.......+++.+++.+.++.+.|. .+++.+ ..++..+.+.+.
T Consensus 236 vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
T TIGR03538 236 CLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWN---DEQHVRENRALYREKFAAVLEI 312 (393)
T ss_pred EEEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHHHHH
Confidence 33 6999876 799999999999998877643333456678888888877773 222222 233333333333
Q ss_pred HHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 391 L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
|++. +. ...+..|+++++++.. + ..++++.|+ ++||.+.+
T Consensus 313 L~~~---~~--~~~p~gg~f~~~~~~~------~----~~~~~~~l~~~~gV~v~p 353 (393)
T TIGR03538 313 LGQV---LD--LELPDAGFYLWPKVPG------D----DEAFARALYEEENVTVLP 353 (393)
T ss_pred HHhh---Cc--ccCCCeeEEEEEECCC------C----HHHHHHHHHHHCCEEEeC
Confidence 3332 11 1235568999998730 1 246777776 57999854
No 162
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=8.2e-18 Score=168.73 Aligned_cols=290 Identities=15% Similarity=0.150 Sum_probs=184.0
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ 177 (447)
++.+|||..|.. +++ .+|.+.+++.+.+... ...|+++...+|.+.+++++..+.++|++++++++++..+++.
T Consensus 23 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~---~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNEN--PYP-PSPKVLEAIRAALGDD---LRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCC--CCC-CCHHHHHHHHHHhhhh---hhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH
Confidence 356899998876 345 4789999998876542 1345655567899999999877778899999999999999986
Q ss_pred HHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEE
Q 013235 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (447)
Q Consensus 178 ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aa 257 (447)
.. ..++.|++.+++|......+... |+.....|.. ..|+-| ++++++ . ....
T Consensus 97 l~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~~------~-~~~v 148 (353)
T PRK05387 97 FF--NHDRPLLFPDITYSFYPVYAGLY-------------GIPYEEIPLD--DDFSID----VEDYLR------P-NGGI 148 (353)
T ss_pred hc--CCCCEEEEeCCCHHHHHHHHHHc-------------CCEEEEeecC--CCCCCC----HHHHHh------c-CCEE
Confidence 53 25678999999985544332221 2222222221 123234 334432 1 2245
Q ss_pred EEEccccCCCceeeCCCChHHHHHHHHHHh-CCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccc
Q 013235 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKA-GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 258 vi~Epi~~~gG~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 332 (447)
++..| ++++|.+.+ .+++.++++++ ++++|+||+|..|+.. ..... .+..+.++ +|||.++ .|+++
T Consensus 149 ~~~~P-~NPtG~~~~----~~~~~~l~~~~~~~~livDe~y~~~~~~--~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~ 219 (353)
T PRK05387 149 IFPNP-NAPTGIALP----LAEIERILAANPDSVVVIDEAYVDFGGE--SAIPL--IDRYPNLLVVQTFSKSRSLAGLRV 219 (353)
T ss_pred EEeCC-CCCCCCCCC----HHHHHHHHHhCCCcEEEEeCcccccCCc--chHHH--HhhCCCEEEEEehhHhhcchhhhc
Confidence 66677 666777765 55556666654 9999999999877521 11111 11123333 5899999 89999
Q ss_pred cccccCHHHHHhhcCCc-ccccCCCChHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeeccee
Q 013235 333 GAVVTTPEIAEVLTRRN-YFNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~-~~~T~~~np~a~aaala~L~~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~ 410 (447)
|++++++++++.+.... ...+++.+++++.++.+.|+.-+ -++..+++++..+++.+.|++ ++. .-.+..|.+
T Consensus 220 G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~~~~~~ 294 (353)
T PRK05387 220 GFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGF-EVLPSKANF 294 (353)
T ss_pred eeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eECCCcCcE
Confidence 99999999988876432 22467778888888877774211 112334444444555555544 332 223445677
Q ss_pred EEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 411 LGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 411 ~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+.+.+... ...++++.|.++||+++
T Consensus 295 ~~~~~~~~---------~~~~~~~~l~~~gi~v~ 319 (353)
T PRK05387 295 VFARHPSH---------DAAELAAKLRERGIIVR 319 (353)
T ss_pred EEEECCCC---------CHHHHHHHHHHCCEEEE
Confidence 76665210 13578889999999985
No 163
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.81 E-value=8.7e-18 Score=172.03 Aligned_cols=316 Identities=16% Similarity=0.129 Sum_probs=183.9
Q ss_pred ecCCCeEEEecCCcccc--cCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhC------CCCCceEEEcC
Q 013235 95 DENGRRYLDAFGGIATV--CCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM------PGNLKVVFFTN 165 (447)
Q Consensus 95 d~dG~~ylD~~~g~~~~--~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~------~~~~~~v~~~~ 165 (447)
..+|+..|+|..|.... .+. .+|.+.+++.+.++... ...| +.....+|.+.+++++ +...++|++++
T Consensus 28 ~~~~~~~i~l~~G~p~~~~~~~-~p~~~~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~ 104 (409)
T PLN00143 28 EDDHRLAISFGFGDPSCFECFR-TTNIAEDAIVEAVRSAK--FNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTL 104 (409)
T ss_pred cCCCCceeeCCCCCCCCCCCCC-CCHHHHHHHHHHHhCcC--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence 44577889988776531 133 57888899988776521 1223 2334445555555554 33457899999
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHH
Q 013235 166 SGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQD 245 (447)
Q Consensus 166 sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~ 245 (447)
++++++..+++... .+++.|++.+++|.+....+... |...+..+......|..| .++|++
T Consensus 105 G~~~al~~~~~~l~--~~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~ 165 (409)
T PLN00143 105 GCKHAAEIIIKVLA--RPEANILLPRPGFPDVETYAIFH-------------HLEIRHFDLLPEKGWEVD----LDAVEA 165 (409)
T ss_pred ChHHHHHHHHHHHc--CCCCEEEEcCCCCcCHHHHHHHc-------------CCEEEEEeccCCCCCcCC----HHHHHH
Confidence 99999999998543 35688999999998775544332 222222221111123334 566766
Q ss_pred HHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Ee
Q 013235 246 LIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TM 322 (447)
Q Consensus 246 ~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~ 322 (447)
++. ++..+.+++.| ++++|.+. +.+.+++|.++|++|++++|+||+|..|...+..+-....++-.+.++ +|
T Consensus 166 ~~~---~~~~~~~~~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~Sf 240 (409)
T PLN00143 166 IAD---ENTIAMVIINP-GNPCGSVY-SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSI 240 (409)
T ss_pred hcc---cCCEEEEEECC-CCCCCCcc-CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccc
Confidence 654 33567788888 55667665 788899999999999999999999998865542111112222222333 58
Q ss_pred ecccc-CCccccccccC-H-HHH------HhhcCCcccccCCCChHHHHHHHHHHHHHhhhhH----HHHHHHHHHHHHH
Q 013235 323 AKGIG-NGIPLGAVVTT-P-EIA------EVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKL----QNNAHVVGSYLKE 389 (447)
Q Consensus 323 sK~lg-~G~pigav~~~-~-~i~------~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l----~~~~~~~g~~l~~ 389 (447)
||.++ .|+|+||++++ + .+. +.+......+++ .+.++++++.+.|+.- .+++ .+.+++..+++.+
T Consensus 241 SK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 318 (409)
T PLN00143 241 SKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKT-TEDFFSKTINILRAALAFCYD 318 (409)
T ss_pred hhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHH
Confidence 99965 79999999983 3 332 222221122233 4677777777777421 1122 2223333333333
Q ss_pred HHHHHHHhcCCee--eEeecceeEEEEEeeCCCCCCCCHHHHHHHH-HHHHhCCceeecc
Q 013235 390 RLTALKDKYGIIG--DVRGRGFLLGVEFVTDRQLKTPAKAETLYIM-DKMKGICALFFSQ 446 (447)
Q Consensus 390 ~L~~l~~~~~~i~--~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~-~~l~~~Gvlv~~~ 446 (447)
.|. +++... ..+..|+++++++..... +......+++ +.+.++||++.++
T Consensus 319 ~L~----~~~~~~~~~~p~gg~f~w~~l~~~~~---~~~~~~~~~~~~ll~~~gV~v~pg 371 (409)
T PLN00143 319 KLK----EIPCIMCPQKAEGAFFALVKLNLLLL---EDIEDDMEFCLKLAKEESLIILPG 371 (409)
T ss_pred HHh----cCCCCCCCCCCCeeEEEEEecchhhc---CCCCCHHHHHHHHHHhCCEEEeCc
Confidence 332 333221 223458999999842100 0000123454 4557889998753
No 164
>PRK07550 hypothetical protein; Provisional
Probab=99.81 E-value=5.3e-18 Score=172.33 Aligned_cols=309 Identities=14% Similarity=0.074 Sum_probs=185.5
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-----cchHHHHHHHHHHHhCC--CCCceEEEcCCHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-----LNHAIADFAEALASKMP--GNLKVVFFTNSGTE 169 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-----~~~~~~elae~L~~~~~--~~~~~v~~~~sGse 169 (447)
.|..++||..|.... . .++.+.+++.+.+... + ...| ..+....+++.+.+... ...++|++++++++
T Consensus 27 ~~~~~i~l~~~~~~~--~-~~~~~~~~~~~~~~~~-~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 101 (386)
T PRK07550 27 ADGPLIDLSQAVPGY--P-PPPELLRALAEAAADP-A-AHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQ 101 (386)
T ss_pred cCCCeEEeCCCCCCC--C-CCHHHHHHHHHHHhCc-C-CcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHH
Confidence 456689998887632 2 3678888877766421 1 1122 22233444444444322 34578999999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
|+..+++... ..++.|++.+++|.+....... .|...++.+......|..| .+++++.++.
T Consensus 102 al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-------------~g~~~~~v~~~~~~~~~~~----~~~l~~~~~~ 162 (386)
T PRK07550 102 AFWAAMVTLA--GAGDEVILPLPWYFNHKMWLDM-------------LGIRPVYLPCDEGPGLLPD----PAAAEALITP 162 (386)
T ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHh-------------cCCEEEEEecCCCcCCCCC----HHHHHHHhcc
Confidence 9998887653 2567899999999655432211 1333333332211222223 5667777653
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcc-cccccCCCCC---EEEeecc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW-GFEAHGVVPD---IVTMAKG 325 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~-~~~~~gv~pD---ivt~sK~ 325 (447)
+..+.+++.|. +++|.+. +.+.+++|.++|++||+++|+||+|.+|...+.... .+...+...+ +.+|||.
T Consensus 163 ---~~~~v~~~~P~-NPtG~~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 237 (386)
T PRK07550 163 ---RTRAIALVTPN-NPTGVVY-PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKS 237 (386)
T ss_pred ---cCcEEEEeCCC-CCCCccc-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhh
Confidence 23345666664 5677665 688899999999999999999999988743221110 1111111222 3379999
Q ss_pred cc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 326 lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
++ .|+++|++++++++++.+.......+.+.+.+++.++...|+.+++ ++..+.+++..+.+.+.|... +.+.
T Consensus 238 ~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~ 313 (386)
T PRK07550 238 YALTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL----PGWE 313 (386)
T ss_pred ccCcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCce
Confidence 98 8999999999999988776543334556678887777777754321 123334444445555555443 2222
Q ss_pred eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 403 ~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
.....|.++++++.... ....++++.|+ ++||++.+
T Consensus 314 ~~~~g~~~~~~~~~~~~-------~~~~~l~~~l~~~~gv~v~p 350 (386)
T PRK07550 314 LLASGAYFAYVRHPFPD-------RPSREVARRLAKEAGILCLP 350 (386)
T ss_pred eCCCceEEEEecCCCCC-------CCHHHHHHHHHHhcCEEEeC
Confidence 12334677787773211 11456888775 57999875
No 165
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=6e-18 Score=171.04 Aligned_cols=299 Identities=15% Similarity=0.097 Sum_probs=185.6
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ 177 (447)
+..+|||..|.. ++| ..|.+.+++.+..... ..|++..-.+|.+.++++++.+.++|++++++++++..+++.
T Consensus 35 ~~~~i~l~~~~~--~~~-~~~~~~~al~~~~~~~----~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 35 VPRIAKLGSNEN--PLG-PSPAVRRAFADIAELL----RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRA 107 (371)
T ss_pred CcceEEcCCCCC--CCC-CCHHHHHHHHHHHHHh----hcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH
Confidence 447899998765 456 6788888887654432 234443334899999998876677899999999999988875
Q ss_pred HHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEE
Q 013235 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (447)
Q Consensus 178 ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aa 257 (447)
.. ..++.|++.+++|.+....+... |+.....|... .++.| .+++++.+... ....
T Consensus 108 ~~--~~gd~vli~~P~y~~~~~~~~~~-------------g~~~~~v~~~~--~~~~~----~~~l~~~~~~~---~~~v 163 (371)
T PRK05166 108 VL--RPGDRVVTLYPSFPLHEDYPTMM-------------GARVERVTVTP--DLGFD----LDALCAAVARA---PRML 163 (371)
T ss_pred hc--CCCCEEEEcCCChHHHHHHHHHc-------------CCeEEEeecCC--CCCCC----HHHHHHhhhcC---CCEE
Confidence 42 35678999999997654332211 22222222211 12233 45666666431 2233
Q ss_pred EEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccccc-CCCCCEE---Eeecccc-CCccc
Q 013235 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 258 vi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~-gv~pDiv---t~sK~lg-~G~pi 332 (447)
++..| ++++|.+. +.+.+++|.++|++ ++++|+||++..|...+......... ...+.++ +|||.++ .|+|+
T Consensus 164 ~l~~p-~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRi 240 (371)
T PRK05166 164 MFSNP-SNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRV 240 (371)
T ss_pred EEeCC-CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhhe
Confidence 44455 56677766 56677777777764 89999999998875322111111111 1223344 5999999 89999
Q ss_pred ccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeE
Q 013235 333 GAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (447)
Q Consensus 333 gav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~ 411 (447)
||+++ ++++++.+.... ..++.|.+++.++.+.|. ++++.++..+.-+.-++.+.+..+++++ .-.+..|+++
T Consensus 241 G~~i~~~~~l~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~p~~g~fl 314 (371)
T PRK05166 241 GYGLVSDPELVGLLDRVR--TPFNVNGAAQAAALAALD---DEEHLAKGVALALAERERLKKELAEMGY-RIAPSRANFL 314 (371)
T ss_pred eeeecCCHHHHHHHHHhc--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCcC-eeCCCcCCEE
Confidence 99765 788888775422 356678888878877774 2233333222222223334444344443 2346678888
Q ss_pred EEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 412 GVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 412 giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
++++..+ ..++++.|+++||++.+.
T Consensus 315 ~~~~~~~----------~~~l~~~l~~~gi~v~p~ 339 (371)
T PRK05166 315 FFDARRP----------ASAVAEALLRQGVIVKPW 339 (371)
T ss_pred EEeCCCC----------HHHHHHHHHHCCeEEecC
Confidence 8875211 356889999999998753
No 166
>PLN02187 rooty/superroot1
Probab=99.80 E-value=1.3e-17 Score=173.12 Aligned_cols=318 Identities=14% Similarity=0.082 Sum_probs=183.9
Q ss_pred CCCeEEEecCCccccc--CCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhC------CCCCceEEEcCCH
Q 013235 97 NGRRYLDAFGGIATVC--CGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM------PGNLKVVFFTNSG 167 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~--lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~------~~~~~~v~~~~sG 167 (447)
+++.+|++..|..... +- ..+++.+++.+.++... ...| +.....+|.+.+++++ +.+.++|++++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~ 140 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFR-TCIEAEDAVVDVLRSGK--GNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGC 140 (462)
T ss_pred CCCCeEECCCCCCCCCCCCC-CCHHHHHHHHHHHhCCC--CCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCH
Confidence 4677888877643210 11 34678888888776431 1223 3444555666666654 2356789999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 168 seA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
++|+..+++... .+++.|++.+++|.+....+... |......|......|+.| ++++++.+
T Consensus 141 ~~al~~~~~~l~--~pGd~Vlv~~P~y~~y~~~~~~~-------------g~~~~~~~l~~~~~~~~d----~~~l~~~~ 201 (462)
T PLN02187 141 NQGIEIVFESLA--RPNANILLPRPGFPHYDARAAYS-------------GLEVRKFDLLPEKEWEID----LEGIEAIA 201 (462)
T ss_pred HHHHHHHHHHhc--CCCCEEEEeCCCCccHHHHHHHc-------------CCEEEEEeCccccCCccC----HHHHHHhc
Confidence 999999998553 35688999999998765433222 222222222112234445 56676665
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeec
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAK 324 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK 324 (447)
. ++..+.+++.|. +++|.+. +.+.+++|.++|++||+++|+||+|..|...|..+.....+.-...++ +|||
T Consensus 202 ~---~~~~~v~i~nP~-NPTG~v~-s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK 276 (462)
T PLN02187 202 D---ENTVAMVVINPN-NPCGNVY-SHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISK 276 (462)
T ss_pred C---CCcEEEEEeCCC-CCCCCcc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchh
Confidence 4 335678888886 5566554 788899999999999999999999998755442221222221112243 5899
Q ss_pred ccc-CCccccccccC-H-HH---HHhhcCCcccccC--CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 013235 325 GIG-NGIPLGAVVTT-P-EI---AEVLTRRNYFNTF--GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD 396 (447)
Q Consensus 325 ~lg-~G~pigav~~~-~-~i---~~~l~~~~~~~T~--~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~ 396 (447)
.++ .|+|+||++++ + .+ ++.+........+ +.+.++++++.+.|+. ..+++.++.++.-+.-++.+.+..+
T Consensus 277 ~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~-~~~~~l~~~~~~l~~~r~~l~~~L~ 355 (462)
T PLN02187 277 GWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEK-ADKNFFAKKNKILKHNVDLVCDRLK 355 (462)
T ss_pred hcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 976 79999999983 3 22 2333321111222 3477888888888752 1123333332222222233333333
Q ss_pred hcCCeee--EeecceeEEEEEeeCCCCCCCCHHHHHHHH-HHHHhCCceeec
Q 013235 397 KYGIIGD--VRGRGFLLGVEFVTDRQLKTPAKAETLYIM-DKMKGICALFFS 445 (447)
Q Consensus 397 ~~~~i~~--vrg~Gl~~giel~~~~~~~~p~~~~~~~~~-~~l~~~Gvlv~~ 445 (447)
+++.+.. .+..|+++++++.........+ ..+++ +.+.++||++.+
T Consensus 356 ~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~---~~~~~~~ll~~~gV~v~p 404 (462)
T PLN02187 356 DIPCVVCPKKPESCTYLLTKLELSLMDNIKD---DIDFCVKLAREENLVFLP 404 (462)
T ss_pred hCCCCcCCCCCCEeEEEEeecChhhCCCCCC---HHHHHHHHHhhCCEEEEC
Confidence 3333222 2445788888774210000001 22344 455789999875
No 167
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.80 E-value=6e-18 Score=168.32 Aligned_cols=272 Identities=15% Similarity=0.103 Sum_probs=178.3
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~a 178 (447)
..+||+.+|.. ++|...+.+.+ ..+.. |+.+. .+|.+.|++++. .++|+++++++||+..++.
T Consensus 20 ~~~i~l~~ne~--p~~~~~~~~~~---~~~~~-------yp~~~-~~Lr~~ia~~~~--~~~I~it~Gs~~al~~~~~-- 82 (330)
T PRK05664 20 ADWLDLSTGIA--PWPWPVPAIPA---DAWAR-------LPETD-DGLEAAARAYYG--APQLLPVAGSQAAIQALPR-- 82 (330)
T ss_pred HHheeecCCcC--CCCCCCcccCH---HHHHh-------CCCCh-HHHHHHHHHHhC--CCCEEECcCHHHHHHHHHH--
Confidence 46799998875 66755444432 22222 44333 688999999984 4789999999999988753
Q ss_pred HhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEE
Q 013235 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (447)
Q Consensus 179 r~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aav 258 (447)
. .+++.|++.+++|.+....+... |...+..| .+++++.+.. ....+
T Consensus 83 -~-~~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~v~--------------~~~~~~~~~~----~~~v~ 129 (330)
T PRK05664 83 -L-RAPGRVGVLSPCYAEHAHAWRRA-------------GHQVRELD--------------EAEVEAALDS----LDVLV 129 (330)
T ss_pred -c-cCCCEEEEcCCChHHHHHHHHHc-------------CCeEEEec--------------hhhHhhhhcC----CCEEE
Confidence 2 35688999999998776554433 23333322 2234444431 22578
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGA 334 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~piga 334 (447)
++.|. +++|.+. +.+.+++|.++|+++|+++|+||+|..|.... .+... .-.++++ +|||.+| .|+|+||
T Consensus 130 l~nP~-NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~-s~~~~---~~~~~vi~~~SfSK~~gl~GlRiG~ 203 (330)
T PRK05664 130 VVNPN-NPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQH-SLAAC---AHRPGLIVLRSFGKFFGLAGARLGF 203 (330)
T ss_pred EeCCc-CCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCcc-ccccc---ccCCCEEEEeeccccccCCCcceEE
Confidence 88996 5666665 67779999999999999999999998774322 22222 2234444 6999999 8999999
Q ss_pred cccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEE
Q 013235 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (447)
Q Consensus 335 v~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gi 413 (447)
+++++++++.+... ..+|+.+.++..++.++|+..+ .+...+.+++..+++.+.|++ ++. ....|.++++.+
T Consensus 204 ~v~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~-~~~~~~~~f~~~ 276 (330)
T PRK05664 204 VLAEPALLRALAEL--LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRR----HGL-TPAGGCALFQWV 276 (330)
T ss_pred EEeCHHHHHHHHHh--cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH----CCC-cccCCcceEEEE
Confidence 99999999887643 2356678888888888885321 122334444444555555444 332 112333467776
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
.+. + ..++.+.|.++||++.
T Consensus 277 ~~~--------~---~~~~~~~l~~~gi~v~ 296 (330)
T PRK05664 277 RTE--------D---AAALHEFLARRGILTR 296 (330)
T ss_pred ecC--------C---HHHHHHHHHHCCeEEE
Confidence 641 1 3578889999999986
No 168
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.80 E-value=1.7e-17 Score=167.23 Aligned_cols=298 Identities=13% Similarity=0.035 Sum_probs=177.8
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCC---CCCceEEEcCCHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP---GNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~---~~~~~v~~~~sGseA~e~ 173 (447)
++..++||..|... ...+|.+.+++.+..+...+....+.......+++.+.+..+ .+.++|++++++++++..
T Consensus 25 ~~~~~i~l~~~~p~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~ 101 (364)
T PRK07865 25 HPDGIVDLSVGTPV---DPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW 101 (364)
T ss_pred cCCCEEEcCCCCCC---CCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHH
Confidence 33457888877532 334678888887654432222111222334455555554433 346789999999999998
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 174 Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
++.+.. ...++.|++.+++|.+........ |...+..++ .++++. .
T Consensus 102 ~~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~-------------~~~l~~-------~ 147 (364)
T PRK07865 102 LPTLLG-LGPGDVVVIPELAYPTYEVGARLA-------------GATVVRADS-------------LTELGP-------Q 147 (364)
T ss_pred HHHHHc-CCCCCEEEECCCCcccHHHHHHhc-------------CCEEEecCC-------------hhhCCc-------c
Confidence 766442 235678999999997654433222 222222211 122211 2
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc--cCCC-CCEE---Eeecccc
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA--HGVV-PDIV---TMAKGIG 327 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~--~gv~-pDiv---t~sK~lg 327 (447)
++.+++++..++++|.+. +.+.+++|.++|+++|+++|+||+|..|...+.....++. .+.. +.++ +|||.++
T Consensus 148 ~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 226 (364)
T PRK07865 148 RPALIWLNSPSNPTGRVL-GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSN 226 (364)
T ss_pred cceEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccC
Confidence 456666666677788776 6788999999999999999999999988655421111111 0111 2233 6999996
Q ss_pred -CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEee
Q 013235 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (447)
Q Consensus 328 -~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg 406 (447)
.|+++|++++++++++.+.......+++.+++.+.++.+.|+ +++..++.++.-+..++.+.+..++++.......
T Consensus 227 ~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 303 (364)
T PRK07865 227 LAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALG---DDAHVREQRERYARRRAVLRPALEAAGFRVDHSE 303 (364)
T ss_pred CCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 799999999999998877653333456677888877777664 2333333232222233333333333432211122
Q ss_pred cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 407 ~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.|+++++++..+ ...+.+.|.++||++.+
T Consensus 304 ~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~p 332 (364)
T PRK07865 304 AGLYLWATRGED----------CWDTVAWLAERGILVAP 332 (364)
T ss_pred ccEEEEEeCCCC----------HHHHHHHHHHCCEEEeC
Confidence 366777765211 24577888999999865
No 169
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=2.1e-17 Score=166.14 Aligned_cols=293 Identities=15% Similarity=0.119 Sum_probs=185.4
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIM 176 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik 176 (447)
++.++|+..|.. +++ .+|.+.+++.+.++... ...|+.+...+|.+.|++++.... ++|++++++++++..+++
T Consensus 25 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMEN--PYR-LPAELRAELGERLAEVA--LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCC--CCC-CCHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 467899887765 566 67899999998876421 134555556789999999886433 478999999999998887
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
+.. ..++.|++.+++|.+....+... |+..++.|.. ..|+.| .+++++.+... ++.
T Consensus 100 ~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~--~~~~~d----~~~l~~~~~~~---~~~ 155 (356)
T PRK04870 100 ACA--KPGATVLAPEPGFVMYRMSAKLA-------------GLEFVGVPLT--ADFTLD----LPAMLAAIAEH---RPA 155 (356)
T ss_pred Hhc--CCCCEEEECCCCHHHHHHHHHHc-------------CCEEEEecCC--CCCCCC----HHHHHHHhhcC---CCC
Confidence 543 35678999999997654332221 3333443332 123344 56677766432 344
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 332 (447)
++++...++++|.+. +.+.+++|.++| ++++|+||+|..|.... ....... .+.++ +||| ++ .|+|+
T Consensus 156 ~v~l~~p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~~~~~-~~~~~~~---~~~vi~~~S~SK-~~~~GlRi 226 (356)
T PRK04870 156 LVFLAYPNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPFAGDS-WLPRLAR---FPNLLVMRTVSK-LGLAGLRL 226 (356)
T ss_pred EEEEcCCCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhhcCcc-hHHHHhh---CCCEEEEecchh-hhhHHHhh
Confidence 454443367777776 455566666665 88999999998885321 1111111 22333 5899 66 59999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeE
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~ 411 (447)
|++++++++++.+.... ..|+.+.++.+++...|+..+. ++..+++++..+++.+.|++ .+.+...+..|.++
T Consensus 227 G~~i~~~~~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~ 300 (356)
T PRK04870 227 GYLAGHPAWIAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAA----LPGVTVFPSAANFI 300 (356)
T ss_pred hhhhCCHHHHHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEECCCCCeEE
Confidence 99999999998876532 3456777887777777752110 12233344444444444443 32233345567788
Q ss_pred EEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 412 GVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 412 giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+. . ..++.+.|.++||++.+
T Consensus 301 ~~~~~--------~---~~~~~~~l~~~gI~v~~ 323 (356)
T PRK04870 301 LVRVP--------D---AAAVFDGLKTRGVLVKN 323 (356)
T ss_pred EEECC--------C---HHHHHHHHHHCCEEEEE
Confidence 88763 1 24688889999999975
No 170
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.80 E-value=1.6e-17 Score=167.10 Aligned_cols=294 Identities=14% Similarity=0.079 Sum_probs=180.0
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCC---CCCceEEEcCCHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP---GNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~---~~~~~v~~~~sGseA~e~ 173 (447)
++..++|+.+|... ...+|.+.+++.+......+....+..+...++++.+.+... .+.++|++++++++++..
T Consensus 19 ~~~~~i~l~~~~p~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 19 HPDGIVDLSVGTPV---DPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCCeEEccCCCCC---CCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 44567898887543 234688888887655433222222223344455555555432 345789999999999998
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 174 Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
++.+.. ...++.|++.+++|.+....+... |...+..+ + .+.++ +.
T Consensus 96 ~~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~---------~----~~~l~-------~~ 141 (357)
T TIGR03539 96 LPTLLG-LGPGDTVVIPELAYPTYEVGALLA-------------GATPVAAD---------D----PTELD-------PV 141 (357)
T ss_pred HHHHHc-CCCCCEEEECCCCcHHHHHHHHhc-------------CCEEeccC---------C----hhhcC-------cc
Confidence 776431 135688999999997665443222 22222221 1 12221 12
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc--cC-CCCC-EE--Eeecccc
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA--HG-VVPD-IV--TMAKGIG 327 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~--~g-v~pD-iv--t~sK~lg 327 (447)
++.+++++..++++|.+. +.+.+++|.++|++||+++|+||+|..|...+.....+.. .+ .... |+ +|||.++
T Consensus 142 ~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 220 (357)
T TIGR03539 142 GPDLIWLNSPGNPTGRVL-SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSN 220 (357)
T ss_pred CccEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccC
Confidence 566777766667777765 6788999999999999999999999888655421111111 11 1112 33 6999996
Q ss_pred -CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 328 -~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
.|+++|++++++++++.+........++.+++++.++.+.|+ +++.. +..++..+++.+.|. +++...
T Consensus 221 ~~G~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L~----~~g~~~ 293 (357)
T TIGR03539 221 LAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALG---DDGHVAEQKARYAARRAQLKPALE----KAGFRI 293 (357)
T ss_pred CCceeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHHHH----HcCCCC
Confidence 799999999999998877643333456778888888777774 22222 333333344444443 333211
Q ss_pred eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 403 ~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.....|+++++++.. ....+.+.|.++||.+.+
T Consensus 294 ~~p~~~~~~~~~~~~----------~~~~~~~~l~~~gV~v~p 326 (357)
T TIGR03539 294 DHSEAGLYLWATRGE----------DAWDTVDRLAELGILVAP 326 (357)
T ss_pred cCCCccEEEEEECCC----------CHHHHHHHHHhCCEEECC
Confidence 112236677776521 134678889999999865
No 171
>PLN02656 tyrosine transaminase
Probab=99.79 E-value=2.8e-17 Score=168.26 Aligned_cols=320 Identities=18% Similarity=0.138 Sum_probs=185.0
Q ss_pred CCCeEEEecCCccccc-CCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhC----C--CCCceEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATVC-CGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM----P--GNLKVVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~-lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~----~--~~~~~v~~~~sGs 168 (447)
.|+.+|+|..|..... .-..++.+.+++.+.+.... ...| +.....+|.+.+++++ + .+.++|+++++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 106 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNK--FNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCT 106 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChH
Confidence 6788999988776421 12357889999888776521 1223 2333445555555554 2 3457899999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+|+..++.... ..++.|++.+++|.......... |+..+..|......|..| .+++++.+.
T Consensus 107 ~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d----~~~l~~~~~ 167 (409)
T PLN02656 107 QAIDVALSMLA--RPGANILLPRPGFPIYELCAAFR-------------HLEVRYVDLLPEKGWEVD----LDAVEALAD 167 (409)
T ss_pred HHHHHHHHHHh--CCCCeEEEeCCCCCcHHHHHHHc-------------CCEEEEEeCCCcCCCCCC----HHHHHHHhc
Confidence 99999988653 35678999999986543322211 222222221111123334 466666654
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecc
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKG 325 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~ 325 (447)
++..+.+++.| ++.+|.+. +++.+++|.++|++||+++|+||+|.+|-..+...-....++-...++ +|||.
T Consensus 168 ---~~~~~v~l~~P-~NPtG~~~-s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 242 (409)
T PLN02656 168 ---QNTVALVIINP-GNPCGNVY-SYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKR 242 (409)
T ss_pred ---cCceEEEEECC-CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchh
Confidence 33566777777 45666664 677899999999999999999999998865552111111122122233 59999
Q ss_pred cc-CCccccccccC--------HHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 013235 326 IG-NGIPLGAVVTT--------PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD 396 (447)
Q Consensus 326 lg-~G~pigav~~~--------~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~ 396 (447)
++ .|+|+|+++++ +++++.+..... ...+.+.+++.++.+.|+.- .+++.++.++.-+.-++.+.+..+
T Consensus 243 f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~L~ 320 (409)
T PLN02656 243 WIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFD-ILGGPATFIQAAVPTILEQT-DESFFKKTINILKQSSDICCDRIK 320 (409)
T ss_pred ccCcceeEEEEEEeCcccccccHHHHHHHHHHHh-hhcCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 79999999983 577776653211 12345778888888888521 122332222222222333333333
Q ss_pred hcCCee-eE-eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 397 KYGIIG-DV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 397 ~~~~i~-~v-rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
+++... .+ +..|+++++++.........+ ....+.+.|.++||++.++
T Consensus 321 ~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~--~~~~~~~~l~~~gV~v~pg 370 (409)
T PLN02656 321 EIPCITCPHKPEGSMAVMVKLNLSLLEDISD--DIDFCFKLAREESVIILPG 370 (409)
T ss_pred hCCCCcCCcCCCeEEEEEEecchhhcCCCCC--HHHHHHHHHHhCCEEEecc
Confidence 333221 12 334788888874210000001 1123456778899998753
No 172
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.79 E-value=3.8e-17 Score=166.25 Aligned_cols=304 Identities=14% Similarity=0.134 Sum_probs=184.9
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcc---cccccccchHHHHHHHHHHHhCCCC---CceEEEcCCHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMPGN---LKVVFFTNSGTEANEL 173 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~---~~~~~~~~~~~~elae~L~~~~~~~---~~~v~~~~sGseA~e~ 173 (447)
.++|+..|... +. .++.+.+|+.+.+.... +....+..+....+++.|++.++.. .+.+++++++++++..
T Consensus 28 ~~~~l~~g~~~--~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGVVS--YP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 35777776653 44 56888999888765432 1112223455667788887776542 4579999999999988
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 174 Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
++.... .+++.|++.+++|.+....... .|+..+..|.. ..|+.| .+++++.+. +
T Consensus 105 ~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~-------------~g~~~~~v~~~--~~~~~d----~~~l~~~i~---~- 159 (389)
T PRK05957 105 AILAIT--DPGDEIILNTPYYFNHEMAITM-------------AGCQPILVPTD--DNYQLQ----PEAIEQAIT---P- 159 (389)
T ss_pred HHHHhc--CCCCEEEEeCCCCcCHHHHHHh-------------cCCEEEEeecC--CCCCcC----HHHHHHhcC---c-
Confidence 887543 3567899989988654332211 13333322221 123334 566776654 2
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCC---EEEeecccc-C
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPD---IVTMAKGIG-N 328 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pD---ivt~sK~lg-~ 328 (447)
++.++++...++++|.+. +++.+++|.++|+++|+++|+||+|..|...+...... ...+..+. +-+|||.+| .
T Consensus 160 ~~klv~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 238 (389)
T PRK05957 160 KTRAIVTISPNNPTGVVY-PEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFA 238 (389)
T ss_pred CceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCc
Confidence 344545544567777766 67789999999999999999999998885443111111 11122222 336999998 7
Q ss_pred CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcCCeeeE
Q 013235 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYGIIGDV 404 (447)
Q Consensus 329 G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~i~~v 404 (447)
|+|+|++++++++++.+.........+.+.+++.++..+|+. .+++. ++++++.+.+.+.|+. .+.+..+
T Consensus 239 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~ 312 (389)
T PRK05957 239 SWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQV--GKSYCQQHLPEIAQVRQILLKSLGQ----LQDRCTL 312 (389)
T ss_pred cceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHh----cCCCccc
Confidence 999999999999998887533333344556777777776641 12232 3333333344444433 3221111
Q ss_pred --eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 405 --RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 405 --rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
...|+++++++..+ ....++++.|+ ++||++.++
T Consensus 313 ~~~~gg~~~~~~~~~~--------~~~~~~~~~l~~~~gv~v~pg 349 (389)
T PRK05957 313 HPANGAFYCFLKVNTD--------LNDFELVKQLIREYRVAVIPG 349 (389)
T ss_pred cCCCeeEEEEEeCCCC--------CChHHHHHHHHHHCCEEEccc
Confidence 23378888887321 11356888886 589998753
No 173
>PRK08912 hypothetical protein; Provisional
Probab=99.79 E-value=2.7e-17 Score=167.14 Aligned_cols=303 Identities=15% Similarity=0.134 Sum_probs=182.0
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhC----C--CCCc-eEEEcCCHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM----P--GNLK-VVFFTNSGTEAN 171 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~----~--~~~~-~v~~~~sGseA~ 171 (447)
..|||..|... .+ .+|.+.+++.+.+... ...|+. ....+|.+.+++++ + .+.+ +|++++|+++|+
T Consensus 27 ~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 100 (387)
T PRK08912 27 GAINLGQGFPD--DP-GPEDVRRAAADALLDG---SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL 100 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH
Confidence 46888888764 34 3678888887766532 122332 22344555555433 2 2345 799999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
..++.... .+++.|++.+++|.+....+... |+..+..|.. ...|+.| .+++++.+.
T Consensus 101 ~~~~~~~~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~-~~~~~~~----~~~l~~~~~--- 157 (387)
T PRK08912 101 AAALLALV--EPGDEVVLFQPLYDAYLPLIRRA-------------GGVPRLVRLE-PPHWRLP----RAALAAAFS--- 157 (387)
T ss_pred HHHHHHhc--CCCCEEEEeCCCchhhHHHHHHc-------------CCEEEEEecC-cccCcCC----HHHHHHHhC---
Confidence 88887542 35678999999997655433221 2222222211 0113333 456666654
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCC-CEE--Eeecccc
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVP-DIV--TMAKGIG 327 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~p-Div--t~sK~lg 327 (447)
++..+.++..| ++++|.+. +.+.+++|.++|++|++++|+||+|..|-..+...-.+ +..+... +++ +|||.+|
T Consensus 158 ~~~~~v~l~~p-~NPtG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 235 (387)
T PRK08912 158 PRTKAVLLNNP-LNPAGKVF-PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFS 235 (387)
T ss_pred ccceEEEEeCC-CCCcCccc-CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhcc
Confidence 22234455555 56667665 67789999999999999999999998764443111111 1112212 233 5899999
Q ss_pred -CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDK----LQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 328 -~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
.|+++|++++++++++.+.......+|+.++....++.+.|. ..++ +.+.+++..+++.+.|+. +++ .
T Consensus 236 ~~GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~ 308 (387)
T PRK08912 236 LTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLG--KPDDYFEGMRADLARSRDRLAAGLRR----IGF-P 308 (387)
T ss_pred CcCceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHh----CCC-c
Confidence 899999999999999887654333457777777777777664 2223 334444444555554444 332 2
Q ss_pred eEee-cceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 403 DVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 403 ~vrg-~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
-... .|+++++++..... + ....++++.|+ ++||++.+
T Consensus 309 ~~~~~g~~~l~~~l~~~~~---~--~~~~~~~~~l~~~~gV~v~p 348 (387)
T PRK08912 309 VLPSQGTYFLTVDLAPLGL---A--EDDVAFCRRLVEEAGVAAIP 348 (387)
T ss_pred ccCCCcceEEEecccccCC---C--CCHHHHHHHHHhcCCEEEec
Confidence 2223 36778888743110 0 11356888876 57998875
No 174
>PRK05839 hypothetical protein; Provisional
Probab=99.79 E-value=1.3e-17 Score=168.79 Aligned_cols=302 Identities=11% Similarity=0.015 Sum_probs=181.3
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc-ccccccchHHHHHHHHHHHhCC--CCCceEEEcCCHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYLNHAIADFAEALASKMP--GNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~elae~L~~~~~--~~~~~v~~~~sGseA~e~ 173 (447)
.|+.+|||..|... ++ .++.+.+++.+....... ....+.......+++.+.+..+ ...++|++++++++|+..
T Consensus 22 ~~~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIGEPQ--FE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCCCCC--CC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 38899999988764 55 467888888766543211 1111222334455555555533 356789999999999988
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 174 Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
++++...-.+++.|++..++|.+....+... |+..++.|....+.|..|. .+. .+. +
T Consensus 99 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d~----~~~--~~~----~ 155 (374)
T PRK05839 99 FPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS-------------RAKVLLMPLTKENDFTPSL----NEK--ELQ----E 155 (374)
T ss_pred HHHHHhcCCCCCEEEECCCCchhhHHHHHhc-------------CCEEEEeecccccCCcCCc----chh--hhc----c
Confidence 8775432235678889999998766554322 3444444332222232221 111 111 1
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-ccc---C--CCCCEE---Eeec
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAH---G--VVPDIV---TMAK 324 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~---g--v~pDiv---t~sK 324 (447)
..+.+|+.| ++++|.+. +.+.+++|.++|+++|+++|+||+|..|...+ ....+ ... + -.+.++ +|||
T Consensus 156 ~k~v~i~nP-~NPTG~~~-s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK 232 (374)
T PRK05839 156 VDLVILNSP-NNPTGRTL-SLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISK 232 (374)
T ss_pred ccEEEEeCC-CCCcCccc-CHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEecccc
Confidence 224455555 45566655 78889999999999999999999999874322 22111 110 0 113344 5999
Q ss_pred ccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 013235 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (447)
Q Consensus 325 ~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 403 (447)
.++ .|+|+||+++++++++.+.......+++.+.+.+.++.+.|. ++++.++. .+.++++.+.+.+.++..
T Consensus 233 ~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~---~~~~~~~~~~~~~~l~~~-- 304 (374)
T PRK05839 233 RSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL---DDEHAEFF---RNIYAKNLKLAREILGIT-- 304 (374)
T ss_pred ccCCccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---cchHHHHH---HHHHHHHHHHHHHhcCCC--
Confidence 986 799999999999998877643323345667777777766663 23333332 233333333333322222
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh-CCceeecc
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG-ICALFFSQ 446 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~-~Gvlv~~~ 446 (447)
.+..|+++++++.+ ..+++++|++ +||++.+.
T Consensus 305 ~p~gg~fi~~~~~~-----------~~~~~~~l~~~~gi~v~pg 337 (374)
T PRK05839 305 IPPATFYVWLPVDN-----------DEEFTKKLYQNEGIKVLPG 337 (374)
T ss_pred CCCeeEEEEEeCCC-----------hHHHHHHHHHHCCEEEeCc
Confidence 45568899988731 2467788875 99998763
No 175
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=1.7e-17 Score=165.30 Aligned_cols=275 Identities=12% Similarity=0.077 Sum_probs=173.6
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
.+|||.+|.+. ++ + ... ..+|+.+...+|.++|++.+....++|+++++++|++..++++.
T Consensus 17 ~~i~l~~Nenp--~~--~----------~~~----~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~- 77 (332)
T PRK06425 17 RIIDFSANIND--FM--D----------IGD----ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYI- 77 (332)
T ss_pred CEEEeccccCC--Cc--C----------hhh----cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh-
Confidence 57999888763 32 0 111 24578888899999999999877888999999999999988632
Q ss_pred hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEE
Q 013235 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (447)
Q Consensus 180 ~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi 259 (447)
+..++++.+++|......+... |...+..|... ++.| .+.++ .. +.-+.++
T Consensus 78 ---~~~~vv~~~P~y~~y~~~~~~~-------------G~~v~~vp~~~---~~~~----~~~l~----~~--~~k~v~l 128 (332)
T PRK06425 78 ---NVGNIIIVEPNFNEYKGYAFTH-------------GIRISALPFNL---INNN----PEILN----NY--NFDLIFI 128 (332)
T ss_pred ---CCCcEEEeCCChHHHHHHHHHc-------------CCeEEEEeCCc---ccCc----HHHHh----hc--CCCEEEE
Confidence 2246888899998776655443 22333332211 1122 12222 21 1224555
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcccccc
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGAV 335 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pigav 335 (447)
+.|. +++|.+. +.+.+++|.++|+++|+++|+||++..|...+ ..-.....+-.+.++ +|||.++ .|+|+||+
T Consensus 129 ~nP~-NPTG~~~-s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~ 205 (332)
T PRK06425 129 VSPD-NPLGNLI-SRDSLLTISEICRKKGALLFIDEAFIDFVPNR-AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYI 205 (332)
T ss_pred eCCC-CCcCCcc-CHHHHHHHHHHHHHcCCEEEEecchhcccccc-chhHHHHhccCCCEEEEeecHHhcCCchhhheee
Confidence 6664 5566654 78889999999999999999999999885433 111111122223444 6999999 99999999
Q ss_pred ccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE-eecceeEE
Q 013235 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDV-RGRGFLLG 412 (447)
Q Consensus 336 ~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~Gl~~g 412 (447)
++++++++.+... ..+|..+.+++++ +...+. ++ +++.+..++..+++.+.|++ ++ +..+ ...|++++
T Consensus 206 v~~~~li~~l~~~--~~~~~~~~~~~~~-l~~~~~-~~~~~~~~~~~~~~r~~l~~~L~~----~g-~~~~~~~~g~f~~ 276 (332)
T PRK06425 206 ATDDYNMKISRKI--TEPWSVCDPAIDF-IRSIDL-DYVAKHSLDIMENERSYLINNLEA----MG-FRAAGDPSANFIT 276 (332)
T ss_pred ecCHHHHHHHHHc--CCCCccCHHHHHH-HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHH----CC-CEECCCCCceEEE
Confidence 9999999888753 2344445444332 222211 11 12334444444445454443 33 2222 45788988
Q ss_pred EEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 413 VEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 413 iel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.+. + ..++.+.|+++||++.+
T Consensus 277 ~~~~-~----------~~~~~~~l~~~gi~v~~ 298 (332)
T PRK06425 277 FMIP-D----------AHDFYSYLLKNGILVRL 298 (332)
T ss_pred EEcC-C----------HHHHHHHHHHCCeEEEE
Confidence 8863 1 35788999999999875
No 176
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.79 E-value=1.9e-17 Score=174.36 Aligned_cols=314 Identities=14% Similarity=0.094 Sum_probs=185.0
Q ss_pred cCCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhC------CCCCceEEEcCCH
Q 013235 96 ENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKM------PGNLKVVFFTNSG 167 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~------~~~~~~v~~~~sG 167 (447)
..|+.+|||..|.. .++|. .++.+++++.+++.... .|+.. ...+|.+.|++++ ....++|++++++
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~----~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~ 217 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTE----GYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGV 217 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCC----CCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcH
Confidence 46788999998765 34554 36789999888776431 24433 3566777777665 3456789999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 168 seA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
+|++..+++... ..++.|++.+++|..+...+... |...+.++......|..| ++++++.+
T Consensus 218 ~eal~~~~~~l~--~~Gd~Vli~~P~y~~y~~~~~~~-------------g~~~v~~~~~~~~~~~~d----~~~l~~~~ 278 (517)
T PRK13355 218 SELINLSMSALL--DDGDEVLIPSPDYPLWTACVNLA-------------GGTAVHYRCDEQSEWYPD----IDDIRSKI 278 (517)
T ss_pred HHHHHHHHHHhC--CCCCEEEEcCCCCcCHHHHHHHC-------------CCEEEEeecCcccCCCCC----HHHHHHhc
Confidence 999999987543 35688999999998766544332 222222222112234444 56666655
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCE--E---Ee
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI--V---TM 322 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDi--v---t~ 322 (447)
. ++..+.+|+.| ++++|.+. +.+.+++|.++|++||++||+||+|..|...|....... ...||+ + +|
T Consensus 279 ~---~~~k~i~i~nP-~NPTG~v~-~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~--~~~~~~~vi~~~S~ 351 (517)
T PRK13355 279 T---SRTKAIVIINP-NNPTGALY-PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIA--SLAPDLFCVTFSGL 351 (517)
T ss_pred C---cCceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHH--HhCCCCeEEEEecc
Confidence 3 33445667778 55666665 688999999999999999999999998855442111111 123453 2 37
Q ss_pred ecccc-CCcccccccc--CHHH----HHhhcCCcccccCCCChHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHH
Q 013235 323 AKGIG-NGIPLGAVVT--TPEI----AEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 323 sK~lg-~G~pigav~~--~~~i----~~~l~~~~~~~T~~~np~a~aaala~L~~i~~-~~l~~~~~~~g~~l~~~L~~l 394 (447)
||.++ .|+++||+++ ++++ ++.+... ....++.|.+++.++.++|+..+. +++.+..++.-+. ++.+.+.
T Consensus 352 SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~-r~~l~~~ 429 (517)
T PRK13355 352 SKSHMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQ-RELVYNA 429 (517)
T ss_pred hhhccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHH-HHHHHHH
Confidence 99987 6999999994 4543 3333211 123355677888888888742100 1122211111111 2333333
Q ss_pred HHhcCCeeeEeecce-eEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 395 KDKYGIIGDVRGRGF-LLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 395 ~~~~~~i~~vrg~Gl-~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.++++.+..+...|. ++++++....... .+ ....+.+.|.++||++.+
T Consensus 430 L~~~~g~~~~~p~g~fy~~~~l~~~~~~~-~~--~~~~~~~ll~~~gV~v~p 478 (517)
T PRK13355 430 LNAIPGISAVKPKAAFYIFPKIDVKKFNI-HD--DEQFALDLLHDKKVLIVQ 478 (517)
T ss_pred HhcCCCcccCCCCeeeEEEeecCcccCCC-CC--HHHHHHHHHHhCCEEEeC
Confidence 333333333444454 4555663210000 01 122344557788999864
No 177
>PRK07683 aminotransferase A; Validated
Probab=99.79 E-value=6.8e-17 Score=164.28 Aligned_cols=304 Identities=12% Similarity=0.093 Sum_probs=178.5
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC----C--CCCc-eEEEcCCHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLK-VVFFTNSGTEA 170 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~----~--~~~~-~v~~~~sGseA 170 (447)
..++||..|... ++ .++.+.+++.+.++... ..|. .....+|.+.+++++ + .+.+ +|++++|+++|
T Consensus 28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~a 101 (387)
T PRK07683 28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENY---TSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEA 101 (387)
T ss_pred CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence 467888877643 33 46788999988876421 1222 223344444444443 2 2345 79999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..+++... ..++.|++..++|.+........ |+..+..|... ..|..| .+++++.+..
T Consensus 102 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~-~~~~~~----~~~l~~~~~~- 160 (387)
T PRK07683 102 IDIAFRTIL--EPGTEVILPAPIYPGYEPIIRLC-------------GAKPVFIDTRS-TGFRLT----AEALENAITE- 160 (387)
T ss_pred HHHHHHHhC--CCCCEEEEcCCCccchHHHHHHc-------------CCEEEEeecCc-ccCCCC----HHHHHHhcCc-
Confidence 999987643 35678999999998765544332 22222222111 112223 4556665542
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEE---Eeeccc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIV---TMAKGI 326 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDiv---t~sK~l 326 (447)
++.++++...++++|.+. +++.+++|.++|+++|+++|+||+|..+...+. .... +..+....++ +|||.+
T Consensus 161 ---~~~~i~i~~p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~ 235 (387)
T PRK07683 161 ---KTRCVVLPYPSNPTGVTL-SKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSH 235 (387)
T ss_pred ---CceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccc
Confidence 234444443456677655 788899999999999999999999998744332 1111 2112222233 689999
Q ss_pred c-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 013235 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (447)
Q Consensus 327 g-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 403 (447)
+ .|+++|++++++++++.+.........+.+.+++.++.+.|+.-+. +.+.++.++..+.+.+.|.+ .+....
T Consensus 236 ~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~ 311 (387)
T PRK07683 236 SMTGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGLDVE 311 (387)
T ss_pred cCccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCccc
Confidence 9 8999999999999988776432223344567777777777642111 12233334444444444443 232212
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHH-HHhCCceeec
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK-MKGICALFFS 445 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~-l~~~Gvlv~~ 445 (447)
....|+++++.+.... . ...++... +.++||++.+
T Consensus 312 ~~~~~~~~~~~~~~~~----~---~~~~~~~~ll~~~gI~v~p 347 (387)
T PRK07683 312 KPTGAFYLFPSIGHFT----M---SSFDFALDLVEEAGLAVVP 347 (387)
T ss_pred CCCeeEEEEEecccCC----C---CHHHHHHHHHHhCCEEEcC
Confidence 2334667776663211 0 12346555 4678999865
No 178
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.79 E-value=4.6e-17 Score=167.58 Aligned_cols=317 Identities=16% Similarity=0.106 Sum_probs=181.1
Q ss_pred CCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhCC------CCCceEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKMP------GNLKVVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~~------~~~~~v~~~~sGse 169 (447)
|+.+|++..|.....-.. ..|++.+++.+.++.... ..|. .....++++.+++++. .+.++|++++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~ 128 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKY--NSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ 128 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcC--CCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHH
Confidence 788999887754321111 357899999888765311 1233 2234556666665542 23478999999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
|+..+++... .+++.|++.+++|..+...+..... .+..++.+ ....|..| ++++++++.
T Consensus 129 al~l~~~~l~--~~Gd~Vlv~~P~y~~y~~~~~~~g~-----------~~~~~~~~--~~~~~~~d----~~~l~~~~~- 188 (430)
T PLN00145 129 AIEIIMSVLA--QPGANILLPRPGYPLYEARAVFSGL-----------EVRHFDLL--PERGWEVD----LEGVEALAD- 188 (430)
T ss_pred HHHHHHHHhc--CCCCEEEEcCCCCccHHHHHHHcCC-----------EEEEeeCC--cccCCcCC----HHHHHHHhC-
Confidence 9999998653 3567899999999875544332211 12222211 11124344 566776664
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeeccc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGI 326 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~l 326 (447)
++..+.+++.|. +++|.+. +.+.+++|.++|+++|+++|+||+|..|...+..+.....++-...++ +|||.+
T Consensus 189 --~~~~~i~i~~P~-NPtG~v~-~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 264 (430)
T PLN00145 189 --ENTVAMVIINPN-NPCGSVY-SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRW 264 (430)
T ss_pred --cCceEEEEeCCC-CCCCCCC-CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEecccccc
Confidence 335677888884 5666654 788899999999999999999999998755442122221122222344 589996
Q ss_pred c-CCcccccccc--CHHHHH------hhcCCcccccC-CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 013235 327 G-NGIPLGAVVT--TPEIAE------VLTRRNYFNTF-GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD 396 (447)
Q Consensus 327 g-~G~pigav~~--~~~i~~------~l~~~~~~~T~-~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~ 396 (447)
+ .|+|+||+++ ++++++ .+.. +.... +.+.+.++++...|+.- .+++.++..+.-+.-++.+.+..+
T Consensus 265 ~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~ 341 (430)
T PLN00145 265 VVPGWRLGWIATCDPNGILKETKVVDSIRN--YLNISTDPATFVQGAIPQIIANT-KEEFFTKTLGLLKETADICYEKIK 341 (430)
T ss_pred CCCCeeEEEEEEecchhhhhhhHHHHHHHH--HhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 7999999996 344432 2221 11222 34567777777777521 122322222221112222322233
Q ss_pred hcCCeee--EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHH-HhCCceeecc
Q 013235 397 KYGIIGD--VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KGICALFFSQ 446 (447)
Q Consensus 397 ~~~~i~~--vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l-~~~Gvlv~~~ 446 (447)
+++.+.. .+..|+++++++..+.-....+ ..+++..+ .++||++.++
T Consensus 342 ~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~---~~~~~~~ll~~~gV~v~pG 391 (430)
T PLN00145 342 EIKCITCPHKPEGSMFVMVKLDLSCLSGIKD---DMDFCCKLAKEESVVVLPG 391 (430)
T ss_pred cCCCCCCCcCCCeeeEEEeccChhhcCCCCC---HHHHHHHHHHhCCEEEeCc
Confidence 3333332 2556788888773210000001 23466555 4679988753
No 179
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.79 E-value=4.6e-17 Score=165.94 Aligned_cols=302 Identities=16% Similarity=0.177 Sum_probs=177.5
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC-----CCCCceEEEcCCHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM-----PGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~-----~~~~~~v~~~~sGseA~ 171 (447)
|..++||..|... ++ .++.+.+++.+..... ..|. .....++.+.+++++ +.+.++|+++++|++|+
T Consensus 29 ~~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~----~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al 101 (397)
T PRK07568 29 GIKVYHLNIGQPD--IK-TPEVFFEAIKNYDEEV----LAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAI 101 (397)
T ss_pred CCCEEEecCCCCC--CC-CCHHHHHHHHHHhcCC----cCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHH
Confidence 3457788776653 23 3578888877654322 1222 233456666666654 33457899999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCC-ChHHHHHHHHHHHHcc
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGA-DGEMYAKDVQDLIDFG 250 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~-d~~~~~~~le~~i~~~ 250 (447)
..+++... .+++.|++.+++|......+.. .|+..++.|......|.. + .+++++.+..
T Consensus 102 ~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-------------~g~~~~~v~~~~~~g~~~~~----~~~l~~~~~~- 161 (397)
T PRK07568 102 LFAMMAIC--DPGDEILVPEPFYANYNGFATS-------------AGVKIVPVTTKIEEGFHLPS----KEEIEKLITP- 161 (397)
T ss_pred HHHHHHhc--CCCCEEEEecCCCccHHHHHHH-------------cCCEEEEeecCcccCCCCCC----HHHHHHhcCc-
Confidence 99987542 3567899888888654322211 123333332211111111 2 3566666542
Q ss_pred CCCCeEEE-EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc-cCCCCCEE---Eeecc
Q 013235 251 TSGHVAGF-LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA-HGVVPDIV---TMAKG 325 (447)
Q Consensus 251 ~~~~~aav-i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~-~gv~pDiv---t~sK~ 325 (447)
++.+| +..| ++++|.+. +.+.+++|.++|+++|+++|+||++.+|...+......-. .+..+.++ +|||.
T Consensus 162 ---~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~ 236 (397)
T PRK07568 162 ---KTKAILISNP-GNPTGVVY-TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKR 236 (397)
T ss_pred ---cceEEEEECC-CCCCCccC-CHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhh
Confidence 33444 5566 55667654 6777999999999999999999999998766522222211 22234444 68999
Q ss_pred cc-CCccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 326 IG-NGIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 326 lg-~G~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
++ .|+|+|+++++ +++++.+..... .+++.+++.+.++.+.|+.-++ +++.+.+++..+.+.+.|+ +++.+
T Consensus 237 ~~~~G~R~G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~ 311 (397)
T PRK07568 237 YSACGARIGCLISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELN----KIPGV 311 (397)
T ss_pred ccCCCcceEEEecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHh----cCCCc
Confidence 98 59999999984 778776543221 3567788888887777752110 1122333444444444443 33323
Q ss_pred eeE-eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh------CCceeec
Q 013235 402 GDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG------ICALFFS 445 (447)
Q Consensus 402 ~~v-rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~------~Gvlv~~ 445 (447)
... +..|+++++++... + ..++.+.|++ +||++.+
T Consensus 312 ~~~~p~g~~~~~~~l~~~------~---~~~~~~~l~~~~~~~~~gv~v~p 353 (397)
T PRK07568 312 VCEKPKGAFYIIAKLPVD------D---AEDFAKWLLTDFNYNGETVMVAP 353 (397)
T ss_pred eecCCCcceEEEEecCCC------C---HHHHHHHHHhhcccccceEEEeC
Confidence 323 23456778887321 1 2456666654 5898875
No 180
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.78 E-value=1e-16 Score=163.88 Aligned_cols=320 Identities=12% Similarity=0.060 Sum_probs=185.6
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc--cccccccchHHHHHHHHHHHhCCC--CCceEEEcCCHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEANEL 173 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~elae~L~~~~~~--~~~~v~~~~sGseA~e~ 173 (447)
|...+|+..|... ++ .+|.+.+++.+.++... +....+..+...++++.+.+..+. ..++|++++++++|+..
T Consensus 32 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEPD--FD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 4457888877753 33 46889999888876421 111122234455666666655443 35679999999999999
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 174 Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
+++.. ...++.|++.+++|.++........+ ....++. .....|..| .+++++.+. ++
T Consensus 109 ~~~~~--~~~gd~vl~~~p~y~~y~~~~~~~~~-----------~~~~v~~--~~~~~~~~~----~~~l~~~~~---~~ 166 (402)
T PRK06107 109 ALMAT--LEAGDEVIIPAPYWVSYPDMVLANDG-----------TPVIVAC--PEEQGFKLT----PEALEAAIT---PR 166 (402)
T ss_pred HHHHh--cCCCCEEEEecCCCcCHHHHHHHcCC-----------EEEEecC--CcccCCCCC----HHHHHhhcC---cC
Confidence 98643 33567888889988766433322111 1112221 111123233 456666553 22
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHh-CCEEEEeccccCccccCCCcccccc--cCCCCCEE---Eeecccc
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA-GGLCIADEVQAGFARTGSHFWGFEA--HGVVPDIV---TMAKGIG 327 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tGfgr~G~~~~~~~~--~gv~pDiv---t~sK~lg 327 (447)
..+.++..| ++++|.+. +.+.+++|.++|++| |+++|+||+|..+...+..+..+.. .+....++ +|||.++
T Consensus 167 ~~~v~l~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 244 (402)
T PRK06107 167 TRWLILNAP-SNPTGAVY-SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYA 244 (402)
T ss_pred ceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhc
Confidence 344555556 55667554 778899999999998 9999999999877544421111111 11223455 4699998
Q ss_pred -CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE-e
Q 013235 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV-R 405 (447)
Q Consensus 328 -~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-r 405 (447)
.|+++|++++++++++.+.......+++.+.++++++...|+. .+.+.++.++.-+.-++.+.+..++++.+.-. .
T Consensus 245 ~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p 322 (402)
T PRK06107 245 MTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP 322 (402)
T ss_pred CcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Confidence 8999999999999998887644445677888888888887741 22232222222111122232322333222222 2
Q ss_pred ecceeEEEEEeeCCCCCCCCHH---HHHHHHHHH-HhCCceeecc
Q 013235 406 GRGFLLGVEFVTDRQLKTPAKA---ETLYIMDKM-KGICALFFSQ 446 (447)
Q Consensus 406 g~Gl~~giel~~~~~~~~p~~~---~~~~~~~~l-~~~Gvlv~~~ 446 (447)
-.|+++++.+..-.....|... ....+++.| .++||++.++
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg 367 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQG 367 (402)
T ss_pred CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 3477788877311000011110 123566555 5689998753
No 181
>PRK08363 alanine aminotransferase; Validated
Probab=99.78 E-value=7.2e-17 Score=164.70 Aligned_cols=308 Identities=14% Similarity=0.029 Sum_probs=183.1
Q ss_pred CCCeEEEecCCcccc-cCCCCCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC----C--CCCceEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATV-CCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLKVVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~----~--~~~~~v~~~~sGs 168 (447)
+|..+||+..|.... .++ .++.+.+++.+.+... ...|. .....+|.+.+++++ + .+.++|+++++++
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 103 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEG---HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVT 103 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcC---CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence 467899999888642 455 5788999998877542 12232 345566777777664 2 3456899999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+|+..++... ...++.|++.+++|.+....+... |...+..+......|..| .+++++.+.
T Consensus 104 ~al~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~v~~~~~~~~~~~~d----~~~l~~~~~ 164 (398)
T PRK08363 104 EALQLIFGAL--LDPGDEILIPGPSYPPYTGLVKFY-------------GGVPVEYRTIEEEGWQPD----IDDIRKKIT 164 (398)
T ss_pred HHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHHc-------------CCEEEEeccccccCCcCC----HHHHHhhCC
Confidence 9999998755 236688999999998765544322 222222211111112223 455665553
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecc
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKG 325 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~ 325 (447)
++..+.+++.| ++.+|.+. +.+.+++|.++|+++|+++|+||+|..|-..+ .........-...++ +|||.
T Consensus 165 ---~~~~~v~l~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~ 238 (398)
T PRK08363 165 ---EKTKAIAVINP-NNPTGALY-EKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVSPGSLTKDVPVIVMNGLSKV 238 (398)
T ss_pred ---cceEEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC-cccCHHHcCcCCcEEEEecchhc
Confidence 22334445555 55667665 67789999999999999999999998774444 221211122122343 69999
Q ss_pred cc-CCcccccccc--CHHHHHhhcCCc---ccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHH
Q 013235 326 IG-NGIPLGAVVT--TPEIAEVLTRRN---YFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALK 395 (447)
Q Consensus 326 lg-~G~pigav~~--~~~i~~~l~~~~---~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~ 395 (447)
++ .|+++|++++ ++++++.+.... ...+++.|+++..++.+.|+. .+++. +.+++..+++.+.|+
T Consensus 239 ~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~l~~~~~~~~~~~~~l~~~L~--- 313 (398)
T PRK08363 239 YFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG--PMDYLEEYMKKLKERRDYIYKRLN--- 313 (398)
T ss_pred cCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHh---
Confidence 65 7999999997 666655543211 113467788888888887752 12233 333444444444433
Q ss_pred HhcCCeeeEee-cceeEEEEEeeCCCCCCCCHHHHHHH-HHHHHhCCceeec
Q 013235 396 DKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYI-MDKMKGICALFFS 445 (447)
Q Consensus 396 ~~~~~i~~vrg-~Gl~~giel~~~~~~~~p~~~~~~~~-~~~l~~~Gvlv~~ 445 (447)
+++.+.-.+. .|+++++.+.... ... ..++ .+.|.++||++.+
T Consensus 314 -~~~~~~~~~p~g~~~~~~~l~~~~---~~~---~~~~~~~~l~~~gV~v~~ 358 (398)
T PRK08363 314 -EIPGISTTKPQGAFYIFPRIEEGP---WKD---DKEFVLDVLHEAHVLFVH 358 (398)
T ss_pred -cCCCCEecCCCeEEEEEEEeccCC---CCC---HHHHHHHHHHhCCEEEeC
Confidence 3332322233 3555666663210 001 1234 4556789999865
No 182
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.77 E-value=9e-17 Score=164.26 Aligned_cols=314 Identities=14% Similarity=0.112 Sum_probs=183.0
Q ss_pred CCCeEEEecCCcccc-cCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCC------CCceEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATV-CCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPG------NLKVVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~------~~~~v~~~~sGs 168 (447)
.|..++|+..|.... +.=..++.+.+++.+.+.... ...| +.....++.+.|++++.. ..+++++++|++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t 106 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGK--FNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCS 106 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChH
Confidence 467889998887641 111246889998888775431 1123 334455666666666532 346799999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+|+..+++... ..++.|++.+++|-+....+... |+..+..+......++.| .+++++.+.
T Consensus 107 ~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~~~ 167 (403)
T TIGR01265 107 QAIEICIEALA--NPGANILVPRPGFPLYDTRAAFS-------------GLEVRLYDLLPEKDWEID----LDGLEALAD 167 (403)
T ss_pred HHHHHHHHHhC--CCCCEEEEeCCCchhHHHHHHHc-------------CCEEEEecCCcccCCccC----HHHHHHHhC
Confidence 99999998654 35678999999886443322211 222222221111122234 466666654
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecc
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKG 325 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~ 325 (447)
++....+++.| ++++|.+. +.+-+++|.++|+++|+++|+||+|..|...+..+.....+.-.++++ +|||.
T Consensus 168 ---~~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 242 (403)
T TIGR01265 168 ---EKTVAIVVINP-SNPCGSVF-SRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKR 242 (403)
T ss_pred ---cCccEEEEecC-CCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccc
Confidence 22334555556 55666554 667789999999999999999999998865552222222222122344 68999
Q ss_pred cc-CCccccccccC--HH-----HHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHH
Q 013235 326 IG-NGIPLGAVVTT--PE-----IAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTA 393 (447)
Q Consensus 326 lg-~G~pigav~~~--~~-----i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~ 393 (447)
++ .|+++|+++++ ++ +.+.+.... ..+++.|++++.++.+.|+.- .+.+. +.+++..+++.+.|
T Consensus 243 ~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L-- 318 (403)
T TIGR01265 243 WVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLL-QRILGPATIVQGALPDILENT-PQEFFDGKISVLKSNAELCYEEL-- 318 (403)
T ss_pred cCCCcceEEEEEEeCchhhhHHHHHHHHHHHh-hhhcCCChHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHH--
Confidence 65 79999999873 22 333332211 124566788888887777531 12232 22333333333333
Q ss_pred HHHhcCCee-eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHH-HhCCceeec
Q 013235 394 LKDKYGIIG-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KGICALFFS 445 (447)
Q Consensus 394 l~~~~~~i~-~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l-~~~Gvlv~~ 445 (447)
+.++.+. ..+..|+++++++.+... +......++++.| .++||++.+
T Consensus 319 --~~~~~~~~~~p~~g~f~~~~~~~~~~---~~~~~~~~~~~~l~~~~gv~v~p 367 (403)
T TIGR01265 319 --KDIPGLVCPKPEGAMYLMVKLELELF---PEIKDDVDFCEKLVREESVICLP 367 (403)
T ss_pred --hcCCCceecCCCceeEEEEecccccc---CCCCCHHHHHHHHHHhCCEEEeC
Confidence 3332222 235568999999853210 0000134677775 578999875
No 183
>PRK07337 aminotransferase; Validated
Probab=99.77 E-value=1.2e-16 Score=162.47 Aligned_cols=308 Identities=16% Similarity=0.171 Sum_probs=185.1
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhC----C--CCCceEEEcCCHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM----P--GNLKVVFFTNSGTEA 170 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~----~--~~~~~v~~~~sGseA 170 (447)
|..++||..|... ++ .+|.+.+++.+.+.... ..|.. ....+|.+.+++++ + ...++|++++++++|
T Consensus 29 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~a 102 (388)
T PRK07337 29 GRDIIHMGIGEPD--FT-APEPVVEAAARALRRGV---TQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAA 102 (388)
T ss_pred CCCEEEeCCcCCC--CC-CCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHH
Confidence 3456888777653 33 46889998888775321 12322 22445555555543 2 245679999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..++.... ..++.|++.+++|.+........ +...+..|......|+.| .+++++.+.
T Consensus 103 l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~~----~~~l~~~~~-- 161 (388)
T PRK07337 103 LLLACLALV--ERGDEVLMPDPSYPCNRHFVAAA-------------EGRPVLVPSGPAERFQLT----AADVEAAWG-- 161 (388)
T ss_pred HHHHHHHhc--CCCCEEEEeCCCchhhHHHHHHc-------------CCEEEEeecCCccCCcCC----HHHHHhhcC--
Confidence 998887542 35678999999998664433222 222222222111223334 456666553
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG 327 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg 327 (447)
++..+.++..| ++++|.+. +.+.+++|.++|+++|+++|+||+|.+|...+ .... .....++++ +|||.++
T Consensus 162 -~~~~~v~l~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~--~~~~~~~vi~~~S~SK~~~ 235 (388)
T PRK07337 162 -ERTRGVLLASP-SNPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDA-APVS--ALSLGDDVITINSFSKYFN 235 (388)
T ss_pred -ccceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCC-CCcC--hhhccCCEEEEEechhhcC
Confidence 33445555666 45667655 67889999999999999999999999886554 2211 112335555 5899997
Q ss_pred -CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCee-
Q 013235 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIG- 402 (447)
Q Consensus 328 -~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~- 402 (447)
.|+++|++++++++++.+.........+.+++++.++.+.++.-..+ +..+.+++..+++.+.|++ +++..
T Consensus 236 ~~G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~ 311 (388)
T PRK07337 236 MTGWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVP 311 (388)
T ss_pred CchhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccc
Confidence 79999999999999887764332334456788887777776410001 1223333444444444433 33321
Q ss_pred eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHH-HhCCceeec
Q 013235 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KGICALFFS 445 (447)
Q Consensus 403 ~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l-~~~Gvlv~~ 445 (447)
..+..|+++++++..... |......++++.+ .++||.+.+
T Consensus 312 ~~p~~g~f~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~p 352 (388)
T PRK07337 312 VMPDGAFYVYADCRGVAH---PAAGDSAALTQAMLHDAGVVLVP 352 (388)
T ss_pred cCCCeeEEEEEecccccC---CCCCCHHHHHHHHHHhCCEEEeC
Confidence 234568999999843110 1111134577665 578999864
No 184
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=1.9e-17 Score=166.12 Aligned_cols=289 Identities=13% Similarity=0.108 Sum_probs=180.3
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
..+|+.+|.+ ++| .+|.+. .. ....|+.+...+|++++++.++.+.++|+++|+++|++..+++...
T Consensus 29 ~~~~l~~Nen--p~~-~~~~~~------~~----~~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~ 95 (351)
T PRK01688 29 GDVWLNANEY--PTA-VEFQLT------QQ----TLNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFC 95 (351)
T ss_pred CceEecCCCC--CCC-CChhhc------cc----ccccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 3588887776 556 344331 11 1345777777899999999988778899999999999999997542
Q ss_pred hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEE
Q 013235 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (447)
Q Consensus 180 ~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi 259 (447)
. .|++.|++.+++|......+... |...+..|.. ..|+.| .+++++.+. +.-..+|
T Consensus 96 ~-~g~~~vli~~P~y~~y~~~~~~~-------------G~~~~~v~~~--~~~~~d----~~~l~~~~~----~~~lv~l 151 (351)
T PRK01688 96 E-PGKDAILYCPPTYGMYSVSAETI-------------GVEIRTVPTL--DNWQLD----LPAIADNLD----GVKVVYV 151 (351)
T ss_pred C-CCCCEEEEcCCCHHHHHHHHHHc-------------CCEEEEeecC--CCCCCC----HHHHHHhcc----CCcEEEE
Confidence 1 23478999999996544332211 2222222221 123344 455555442 2334566
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcccccc
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGAV 335 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pigav 335 (447)
+.|. +++|.+. +.+.+++|.+.|++ ++++|+||+|..|.... .+ .......|.++ +|||.+| .|+++|++
T Consensus 152 ~nPn-NPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~-s~--~~~~~~~~n~iv~rSfSK~~glaGlRiGy~ 225 (351)
T PRK01688 152 CSPN-NPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIEFCPQA-SL--AGWLAEYPHLVILRTLSKAFALAGLRCGFT 225 (351)
T ss_pred eCCC-CCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhhcCCCC-Ch--HHHHhhCCCEEEEecchHhhcCHHHHHhHH
Confidence 6665 5556655 66677788877776 68999999998885221 11 12222345655 6999999 79999999
Q ss_pred ccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee-eEeecceeEEEE
Q 013235 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRGRGFLLGVE 414 (447)
Q Consensus 336 ~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~vrg~Gl~~gie 414 (447)
++++++++.+... ...|+.|.+++++|.++|+.-..+.+.++.+.+ ...++.|.+..++++.+. -.+..|+++.++
T Consensus 226 i~~~~~i~~l~~~--~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~-~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~ 302 (351)
T PRK01688 226 LANEEVINLLLKV--IAPYPLSTPVADIAAQALSPQGIAAMRERVAEI-NANRQWLIAALKEIPCVEQVFDSETNYILAR 302 (351)
T ss_pred hCCHHHHHHHHhc--cCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCeECCCCCcEEEEE
Confidence 9999999888753 245677777777877777521011122222221 122333333333443332 335678888887
Q ss_pred EeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 415 FVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 415 l~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.+ ..++.+.|+++||+++.
T Consensus 303 ~~~-----------~~~l~~~L~~~gi~vr~ 322 (351)
T PRK01688 303 FTA-----------SSAVFKSLWDQGIILRD 322 (351)
T ss_pred cCC-----------HHHHHHHHHHCCeEEEE
Confidence 631 35788999999999974
No 185
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.77 E-value=2.8e-17 Score=164.15 Aligned_cols=269 Identities=15% Similarity=0.071 Sum_probs=176.8
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCC-CceEEEcCCHHHHHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMM 177 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~e~Aik~ 177 (447)
..+|||.+|.+ ++|...+.+.. ..+ ..|+.+. .+|.++|++++... .++|+++|+++|++.....+
T Consensus 24 ~~~i~ls~Nen--p~~~~~~~~~~---~~~-------~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~ 90 (339)
T PRK06959 24 DAWLDLSTGIN--PHGYPVPPVPA---DAW-------RRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPAL 90 (339)
T ss_pred hhhceeccCCC--CCCCCCCCCCH---HHH-------HhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHh
Confidence 46899999985 77865333321 122 2367666 89999999998764 37899999999999865432
Q ss_pred HHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEE
Q 013235 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (447)
Q Consensus 178 ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aa 257 (447)
. +..+|++.+++|.+....+... |...++.|. |. +.+++ .....
T Consensus 91 ---~-~~g~v~v~~P~y~~y~~~~~~~-------------g~~~~~v~~--------~~----~~~~~-------~~~~v 134 (339)
T PRK06959 91 ---L-PRGRVGIAPLAYSEYAPAFARH-------------GHRVVPLDE--------AA----DTLPA-------ALTHL 134 (339)
T ss_pred ---c-CCCeEEEcCCCcHHHHHHHHHC-------------CCEEEeecc--------cc----hhccc-------cCCEE
Confidence 2 2345888999998766554332 223333221 10 11111 11257
Q ss_pred EEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcccc
Q 013235 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLG 333 (447)
Q Consensus 258 vi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig 333 (447)
+++.|. +++|.+. +.+.+++|.+.|+++++++|+||+|..|...- .+... .+ .++++ +|||.+| .|+|+|
T Consensus 135 ~l~nPn-NPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~-s~~~~--~~-~~~vi~l~SfSK~~gl~GlRiG 208 (339)
T PRK06959 135 IVVNPN-NPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADTLPAA-SLAAH--TD-RPGLVVLRSVGKFFGLAGVRAG 208 (339)
T ss_pred EEeCCC-CCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccCCCcc-cchhc--cC-CCCEEEEecChhhcCCcchheE
Confidence 889995 5666655 67778888888999999999999999884321 12211 11 24444 6999999 899999
Q ss_pred ccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHhcCCeeeEeecce
Q 013235 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ----NNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (447)
Q Consensus 334 av~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl 409 (447)
|+++++++++.+.... .+|+.|.++++++.++|+ +.++. +.+++..+++.+.|+++ ++ .+...++
T Consensus 209 y~v~~~~li~~l~~~~--~~~~vs~~~q~a~~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~----g~--~~~~~~~ 277 (339)
T PRK06959 209 FVLAAPALLAALRDAL--GAWTVSGPARHAVRAAFA---DAAWQAAMRERLAADGARLAALLRAH----GF--AVHATPL 277 (339)
T ss_pred EEecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC----CC--CccCcce
Confidence 9999999999887532 457778889888888885 23333 44444444455544443 32 2233577
Q ss_pred eEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 410 ~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++++.+. + ..++.+.|.++||+++
T Consensus 278 f~~~~~~-~----------~~~l~~~l~~~GI~vr 301 (339)
T PRK06959 278 FSWTDDP-R----------AAALHAALARRGIWTR 301 (339)
T ss_pred EEEEeCC-C----------HHHHHHHHHhCCeEEE
Confidence 7777652 1 3578999999999996
No 186
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=6.4e-17 Score=161.43 Aligned_cols=279 Identities=15% Similarity=0.142 Sum_probs=179.0
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
.|..++||..|.. +++ .+|.+.+++.+.+.... ...|+.....+|.+.+++++..+.++|++++++++++..+++
T Consensus 16 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 16 EGNYRIWLDKNEN--PFD-LPEELKEEIFEELKRVP--FNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHhhcCc--cccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 4556789888765 455 56899999988775421 234666667889999999987667889999999999987766
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
.. .++.|++..++|......+.. .|+..++.|.. ..|+.| .+++++.+. +...
T Consensus 91 ~~----~gd~V~v~~P~y~~~~~~~~~-------------~g~~~~~v~~~--~~~~~d----~~~l~~~~~----~~~~ 143 (337)
T PRK03967 91 LF----EGKHIVITPPTFGMYSFYAKL-------------NGIPVIDVPLK--EDFTID----GERIAEKAK----NASA 143 (337)
T ss_pred Hh----CCCeEEEeCCChHHHHHHHHH-------------cCCeEEEeecC--CCCCcC----HHHHHHhcc----CCCE
Confidence 42 457899999999643322211 12333332221 123334 345555432 1234
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 332 (447)
.++..| ++++|.+.+ .++|.++++ +++++|+||+|..|.. . ... ...+..++++ +|||.++ .|+|+
T Consensus 144 v~~~~P-~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~-~-~~~--~~~~~~~~vi~l~S~SK~~~l~GlRi 213 (337)
T PRK03967 144 VFICSP-NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSG-K-SLI--GLIDEYPNLILLRTFSKAFGLAGIRA 213 (337)
T ss_pred EEEeCC-CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcc-c-chH--HHHhhCCCEEEEecchHhhcchhhhh
Confidence 556666 666777665 567778884 7999999999998842 1 121 1112224444 5999999 89999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHHHhcCCeeeEeecce
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQN---NAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl 409 (447)
||+++++++++.+.... .+++.+.++..++.+.|+.. +.+.+ ...+..+.+.+.|. ++ ..++.|+
T Consensus 214 G~iv~~~~~i~~~~~~~--~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~----~~----~~~~~~~ 281 (337)
T PRK03967 214 GYAIANEEIIDALYRIK--PPFSLNILTMKIVRLALDHY--DLIEERIDYIIKERERVRRELG----EY----AYPSDAN 281 (337)
T ss_pred eeeecCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHhc----cC----cCCCCCc
Confidence 99999999988876432 35667888888888777521 11222 22222223333332 22 2356688
Q ss_pred eEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 410 ~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++++++ .+.+.|+++||+++
T Consensus 282 ~~~~~~---------------~~~~~l~~~gi~v~ 301 (337)
T PRK03967 282 FLLLKL---------------DAYDYLLENGIVVR 301 (337)
T ss_pred EEEEhH---------------HHHHHHHHCCEEEE
Confidence 887765 16788889999986
No 187
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.77 E-value=2.4e-16 Score=158.96 Aligned_cols=285 Identities=18% Similarity=0.135 Sum_probs=175.5
Q ss_pred CCCCHHHHHHHHHHHHhccccccccc--chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc--CCCeEEE
Q 013235 114 GHCHPYVVDSIVNQIKRIQHSTVLYL--NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--GCNDIIS 189 (447)
Q Consensus 114 Gh~~p~v~~A~~~~l~~~~~~~~~~~--~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t--~~~~ii~ 189 (447)
-|.||.+.+++.++++...+....++ .....+++++|++.++.+...++|++||++|+..+++.++... ++++|++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~ 109 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVV 109 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEe
Confidence 46899999999998875422222232 2334688899999886544567899999999999999887542 3567888
Q ss_pred EcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCce
Q 013235 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (447)
Q Consensus 190 ~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~ 269 (447)
.+.++..+...+ ...+ ..+..++.+. .+..| .++|++.+.. +....+++.+ .+++|.
T Consensus 110 ~~~~h~s~~~~~-~~~g----------~~~~~v~~~~----~~~~d----~~~l~~~i~~---~~~~vi~~~~-~~~tG~ 166 (371)
T PRK13520 110 PESAHFSFDKAA-DMLG----------VELRRAPLDD----DYRVD----VKAVEDLIDD---NTIGIVGIAG-TTELGQ 166 (371)
T ss_pred cCcchHHHHHHH-HHcC----------ceEEEecCCC----CCcCC----HHHHHHHHhh---CCEEEEEEcC-CcCCcc
Confidence 777654322211 1110 1223333221 11123 5777777753 2333333443 456788
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEeccccCcc----ccCCCcccccccCCCCCEEEee--ccccCCcccccccc-CHHHH
Q 013235 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGFA----RTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVT-TPEIA 342 (447)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfg----r~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~-~~~i~ 342 (447)
+.+ +++|.++|+++|+++|+||+|+++. +.+ ..|.+... ..|.++++ |...+|.|+|+++. +++++
T Consensus 167 ~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~-~~~~~~~~--~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~ 239 (371)
T PRK13520 167 VDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDP-PNFDFSLP--GVDSITIDPHKMGLAPIPAGGILFRDESYL 239 (371)
T ss_pred cCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCC-CCccccCC--CCceEEECCccccCccCCceEEEEcCHHHH
Confidence 876 9999999999999999999998763 111 11222222 24666543 64445689987775 55677
Q ss_pred HhhcCC-cc---------cccCCCChHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecce
Q 013235 343 EVLTRR-NY---------FNTFGGNPVCTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (447)
Q Consensus 343 ~~l~~~-~~---------~~T~~~np~a~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl 409 (447)
+.+... .+ .+|. ++..++++.++|+.+.+++ +.++..++.++|+++|+++ .+..+ +.....
T Consensus 240 ~~l~~~~~~~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~~~ 313 (371)
T PRK13520 240 DALAVDTPYLTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER--GFEPV--IEPVLN 313 (371)
T ss_pred HhhcccCccccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC--CCEEe--cCCCce
Confidence 765421 11 1122 3455777788888776544 6677888888888888765 23211 122344
Q ss_pred eEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 410 ~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+.+. ...++.+.|.++||++..
T Consensus 314 ~v~~~~~-----------~~~~v~~~L~~~gi~v~~ 338 (371)
T PRK13520 314 IVAFDDP-----------NPDEVREKLRERGWRVSV 338 (371)
T ss_pred EEEEecC-----------CHHHHHHHHHHCCceecc
Confidence 6666552 135788899999998853
No 188
>PRK06855 aminotransferase; Validated
Probab=99.77 E-value=1.2e-16 Score=164.80 Aligned_cols=291 Identities=13% Similarity=0.106 Sum_probs=163.7
Q ss_pred CCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC------CCCCceEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~------~~~~~~v~~~~sGse 169 (447)
|+..+++..|.... .+. .++.+.+++.+.+... . ...|. .....+|.+.+++++ +.+.++|++++++++
T Consensus 31 g~~~~~~~~G~p~~-~~~~~p~~~~~a~~~~~~~~-~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~ 107 (433)
T PRK06855 31 GVKITWENIGDPIA-KGEKIPDWMKEIVAELVMDD-K-SYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGD 107 (433)
T ss_pred cccccccccCCCcc-cCCCCCHHHHHHHHHHhhcC-C-CCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHH
Confidence 44555554443211 122 4667777877766442 1 11222 233444555555443 234568999999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
|+..++.+ ..+++.|++.+++|++......... ++..+..|......|+.| .++|++.+..
T Consensus 108 al~~~~~l---~~~Gd~Vlv~~P~Y~~~~~~~~~~~------------g~~~v~v~~~~~~~~~~d----~~~l~~~~~~ 168 (433)
T PRK06855 108 AIAKIYGL---LRREARVIGPSPAYSTHSSAEAAHA------------GYPPVTYRLDPENNWYPD----LDDLENKVKY 168 (433)
T ss_pred HHHHHHHh---cCCCCeEEEeCCCCchHHHHHHHhc------------CCeEEEEecccccCCCCC----HHHHHHHHhc
Confidence 99988742 3456889999999998543221111 222222222111223334 5778777753
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEE--Eeeccc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIV--TMAKGI 326 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDiv--t~sK~l 326 (447)
. ++..+.+++.| ++++|.+. +++.+++|.++|++||+++|.||+|..|...+..+..+ +...-.+-|+ +|||.+
T Consensus 169 ~-~~~~~i~l~~P-~NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~ 245 (433)
T PRK06855 169 N-PSIAGILLINP-DNPTGAVY-PKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKEL 245 (433)
T ss_pred C-CCceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCcccc
Confidence 2 22345667777 56666654 78999999999999999999999999886555222121 1111011133 699999
Q ss_pred c-CCccccccccC-----H---HHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH---H
Q 013235 327 G-NGIPLGAVVTT-----P---EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTA---L 394 (447)
Q Consensus 327 g-~G~pigav~~~-----~---~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~---l 394 (447)
+ .|+++||++++ + ++++.+.... ....+.+.+++.++.+.|+ +..+.++++++.+.++++... .
T Consensus 246 ~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~ 321 (433)
T PRK06855 246 PWPGSRCGWIEVYNADKDEVFKKYINSILNAK-MIEVCSTTLPQMAIPRIMS---HPEYKNYLKERNKRYEKRSNIAYEK 321 (433)
T ss_pred CCCcceEEEEEEeCCchhhHHHHHHHHHHHhh-ccccCCChHHHHHHHHhhc---CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 89999999972 2 2333332211 1234567788877777663 333333343333333333322 2
Q ss_pred HHhcCCeeeEee-cceeEEEEEee
Q 013235 395 KDKYGIIGDVRG-RGFLLGVEFVT 417 (447)
Q Consensus 395 ~~~~~~i~~vrg-~Gl~~giel~~ 417 (447)
.++++.+.-.+. .|+++++.+.+
T Consensus 322 L~~~~~~~~~~p~gg~~~w~~l~~ 345 (433)
T PRK06855 322 LKDVPGLKVNRTNGAFYMTVVFED 345 (433)
T ss_pred HhcCCCeeccCCCeeEEEeecccc
Confidence 233322222233 46889998843
No 189
>PRK08354 putative aminotransferase; Provisional
Probab=99.76 E-value=1.8e-16 Score=156.38 Aligned_cols=270 Identities=14% Similarity=0.106 Sum_probs=174.2
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
+...+|||..|.. +++ +|.+.+++.+.++.. ..|+. ...+.++++++++ ++|+++++++||+..++.
T Consensus 6 ~~~~~i~l~~~~n--p~~--p~~~~~a~~~~~~~~----~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~ 72 (311)
T PRK08354 6 REEGLIDFSASVN--PYP--PEWLDEMFERAKEIS----GRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGI 72 (311)
T ss_pred CccceeEecCCCC--CCC--CHHHHHHHHHHHHHh----hcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHH
Confidence 4456999998764 444 588999988776543 23442 4678889998875 358899999999987764
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
+. .+++.|++.+++|.+....+... |...+..+ .| .+.+++.+.+ ...
T Consensus 73 ~~---~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~~~--------~d----~~~l~~~~~~----~~~ 120 (311)
T PRK08354 73 LA---LRDRKVIIPRHTYGEYERVARFF-------------AARIIKGP--------ND----PEKLEELVER----NSV 120 (311)
T ss_pred hh---CCCCeEEEeCCCcHHHHHHHHHc-------------CCEEeecC--------CC----HHHHHHhhcC----CCE
Confidence 32 25688999999998776655433 22222211 23 4556665541 235
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCccc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 332 (447)
.+++.|. +++|.+. +.+.+++|.++|+++|+++|+||++.+|...+ .. .. .+.++ +|||.++ .|+|+
T Consensus 121 vi~~~P~-NPTG~~~-~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~-~~--~~----~~~vi~~~S~SK~~~l~GlRi 191 (311)
T PRK08354 121 VFFCNPN-NPDGKFY-NFKELKPLLDAVEDRNALLILDEAFIDFVKKP-ES--PE----GENIIKLRTFTKSYGLPGIRV 191 (311)
T ss_pred EEEecCC-CCCCCcc-CHHHHHHHHHHhhhcCcEEEEeCcchhccccc-cc--cC----CCcEEEEeccHhhcCCcccee
Confidence 7888885 5667655 78889999999999999999999999885443 11 11 22333 6999999 89999
Q ss_pred cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEE
Q 013235 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (447)
Q Consensus 333 gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~g 412 (447)
|++++ +.+.+.... ..+..+..+.+++.+.++ +. .+++++..+++++..+.+.... .+.+.|.|+.
T Consensus 192 G~~v~---~~~~l~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~ 257 (311)
T PRK08354 192 GYVKG---FEEAFRSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKAL----YVKSDANFFI 257 (311)
T ss_pred eeeee---hHHHHHHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhc----CCCCCCcEEE
Confidence 99998 344444322 334555655555544443 21 2333444444455444443222 1345666666
Q ss_pred EEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 413 VEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 413 iel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+++. + ..++++.|+++||++.+
T Consensus 258 ~~~~--------~---~~~~~~~l~~~gv~v~~ 279 (311)
T PRK08354 258 KDVG--------D---AEKFVEFLKRNGILVRD 279 (311)
T ss_pred EECC--------C---HHHHHHHHHHCCeEEEe
Confidence 6542 1 24688889999999875
No 190
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.76 E-value=1e-16 Score=164.14 Aligned_cols=311 Identities=14% Similarity=0.086 Sum_probs=178.5
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc--ccccc-cchHHHHHHHHHHHhC------CCCCceEEEcCCHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH--STVLY-LNHAIADFAEALASKM------PGNLKVVFFTNSGT 168 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~--~~~~~-~~~~~~elae~L~~~~------~~~~~~v~~~~sGs 168 (447)
+..++|+..|.. .++ .+|.+.+++.+.+..... ....| +.....+|.+.|++++ +.+.++|+++++++
T Consensus 33 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDV--TQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcCC--CCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 556788887765 344 568899999888775321 11223 3444556666666653 44567899999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCC-eEeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG-VHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g-~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
+++...+. ...+++.|++.+++|.+....+........ . .+... ...++.|....+.|..| ++
T Consensus 110 ~al~~l~~---~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~--~~~~~~~~~~~v~~~~~~~~~~d-------~~--- 173 (409)
T PRK07590 110 CDTGNILD---IFGPDNTIAVTDPVYPVYVDTNVMAGRTGE-A--NEDGRYSGIVYLPCTAENNFVPE-------LP--- 173 (409)
T ss_pred HHHHHHHH---hcCCCCEEEEeCCCCcchHHHHHHcCCccc-c--cccccccceeEeecccccCCccc-------Cc---
Confidence 99987543 234678899999999887755544322100 0 00000 00122221111112111 11
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC-EE---Eee
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD-IV---TMA 323 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD-iv---t~s 323 (447)
. ++.-+.+++.| ++++|.+. +.+.+++|.++|++|+++||.||+|..|-..+.........+-.++ ++ +||
T Consensus 174 -~--~~~k~i~l~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 248 (409)
T PRK07590 174 -E--EKVDIIYLCFP-NNPTGTVL-TKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFS 248 (409)
T ss_pred -c--cCceEEEEeCC-CCCcCCcC-CHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCc
Confidence 1 11224445566 56667665 7888999999999999999999999988544421111111111122 23 699
Q ss_pred cccc-CCccccccccCHHHHHhhc-----------CCcccccC-CCChHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q 013235 324 KGIG-NGIPLGAVVTTPEIAEVLT-----------RRNYFNTF-GGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYL 387 (447)
Q Consensus 324 K~lg-~G~pigav~~~~~i~~~l~-----------~~~~~~T~-~~np~a~aaala~L~~i~~---~~l~~~~~~~g~~l 387 (447)
|.++ .|+++|++++++++++.+. ......++ +.+.+++.++.++|+.-.+ +++.+.+++..+.+
T Consensus 249 K~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l 328 (409)
T PRK07590 249 KTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKII 328 (409)
T ss_pred cccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 9998 8999999999999887321 01112333 4567777777776641001 11233333333444
Q ss_pred HHHHHHHHHhcCCeeeEee-cceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 388 KERLTALKDKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 388 ~~~L~~l~~~~~~i~~vrg-~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
.+.|++ ++ +.-..+ .|+++++++.+. ....++++.|+ +.||++.+
T Consensus 329 ~~~L~~----~~-~~~~~~~g~~f~wi~~~~~--------~~~~~~~~~l~~~~gv~v~p 375 (409)
T PRK07590 329 REGLES----AG-FEVYGGVNAPYIWVKTPDG--------MSSWDFFDKLLQEANVVGTP 375 (409)
T ss_pred HHHHHh----cC-CceecCCcceEEEEECCCC--------CCHHHHHHHHHHHCCEEEeC
Confidence 444433 33 222333 478889987431 01345777776 56998864
No 191
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.76 E-value=1e-16 Score=161.99 Aligned_cols=272 Identities=13% Similarity=0.092 Sum_probs=159.6
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~ 219 (447)
++...++.|.|++++.. +.+.+++||++++..++.... ..++.|++....++... ..+... |+
T Consensus 50 ~~~~~~~~e~lA~~~g~--~~~~i~~g~~~a~~~~~~~l~--~~gd~Vl~~~~~h~s~~-~~~~~~------------g~ 112 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGM--DEARVTHGAREGKFAVMHALC--KEGDWVVLDGLAHYTSY-VAAERA------------GL 112 (370)
T ss_pred chHHHHHHHHHHHHhCC--CceEEECChHHHHHHHHHHhh--CCCCEEEECCcccHHHH-HHHHHc------------CC
Confidence 34677888999999854 556788999999999887553 34566776556654332 222222 22
Q ss_pred EeecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
....+|......+..| .++|++.+.... ..++.+|+++.+.++.|.+.+ +++|.++|+++|+++|+||+
T Consensus 113 ~~~~~~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea 184 (370)
T TIGR02539 113 NVKEVPHTGHPEYKVD----PEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCA 184 (370)
T ss_pred EEEEEecCCcccCCcC----HHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECc
Confidence 2222221111123335 566766664311 124567777767777888777 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCCEE--EeeccccCCccccccccCHHHHHhhcCCcccc------cCCC--ChHHHHHHHH
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFN------TFGG--NPVCTAAGHA 366 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pigav~~~~~i~~~l~~~~~~~------T~~~--np~a~aaala 366 (447)
|. +|..+. ...+..+|++ +++|.++.|.|+|++++++++++.+....... .+++ ...+++++.+
T Consensus 185 ~~-~g~~~~-----~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T TIGR02539 185 YT-VGRMPV-----SAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMA 258 (370)
T ss_pred cc-cCCcCC-----CHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHH
Confidence 96 443221 1112236766 68999997778999999999999887533110 1111 1235666666
Q ss_pred HHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCce-ee
Q 013235 367 VLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICAL-FF 444 (447)
Q Consensus 367 ~L~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvl-v~ 444 (447)
+|+.+.+. +...+..+..++|+++|+++ .+..+........++.+++..-......+...+..+.+.|+++||+ ++
T Consensus 259 al~~~~~~l~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir 336 (370)
T TIGR02539 259 SFPHVVERVKRWDEEVKKTRWFVAELEDI--GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR 336 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc
Confidence 77643221 11222333356788888775 2222112234566666654110000000111235689999999997 54
No 192
>PRK09265 aminotransferase AlaT; Validated
Probab=99.75 E-value=3.1e-16 Score=160.36 Aligned_cols=310 Identities=13% Similarity=0.088 Sum_probs=181.5
Q ss_pred CCCeEEEecCCcccccCCC-CCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhC------CCCCceEEEcCCHH
Q 013235 97 NGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKM------PGNLKVVFFTNSGT 168 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~------~~~~~~v~~~~sGs 168 (447)
.|+..+||..|... ++++ .++++.+++.+.+... ..|..+ ...+|.+.+++.+ +...++|+++++++
T Consensus 31 ~~~~~i~l~~g~p~-~~~~~~~~~i~~~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 105 (404)
T PRK09265 31 EGHKILKLNIGNPA-PFGFEAPDEILRDVIRNLPTA----QGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVS 105 (404)
T ss_pred cCCCeEEecCCCCC-cCCCCCCHHHHHHHHHHhhcC----CCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChH
Confidence 56688999877543 3454 4678888888765432 223322 3456777777765 34567899999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+++..+++... .+++.|++.+++|......+... |...+..+......|..| .+++++.+.
T Consensus 106 ~~l~~~~~~~~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~v~~~~~~~~~~~~d----~~~l~~~~~ 166 (404)
T PRK09265 106 ELIVMAMQALL--NNGDEVLVPAPDYPLWTAAVSLS-------------GGKPVHYLCDEEAGWFPD----LDDIRSKIT 166 (404)
T ss_pred HHHHHHHHHhC--CCCCEEEEeCCCCcChHHHHHHc-------------CCEEEEEecccccCCCCC----HHHHHHhcc
Confidence 99999887542 35678999999997654433222 222222211111122233 456666553
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC--EE---Eee
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD--IV---TMA 323 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD--iv---t~s 323 (447)
++..+.+++.| ++++|.+. +.+-+++|.++|+++|+++|+||+|.+|-..+........ ..++ ++ +||
T Consensus 167 ---~~~~~v~l~~P-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~~vi~~~S~S 239 (404)
T PRK09265 167 ---PRTKAIVIINP-NNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIAS--LAPDLLCVTFNGLS 239 (404)
T ss_pred ---ccceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHH--cCCCceEEEEecch
Confidence 22334556666 55677665 6788999999999999999999999988544421111111 1222 33 489
Q ss_pred cccc-CCcccccccc--CHH----HHHhhcCCcccccCCCChHHHHHHHHHHHHHhh-hhHHH---HHHHHHHHHHHHHH
Q 013235 324 KGIG-NGIPLGAVVT--TPE----IAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-DKLQN---NAHVVGSYLKERLT 392 (447)
Q Consensus 324 K~lg-~G~pigav~~--~~~----i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~-~~l~~---~~~~~g~~l~~~L~ 392 (447)
|.++ .|+++|++++ +++ +++.+... ...+++.|.++..++.++|...+. +++.+ ++.+..+.+.+
T Consensus 240 K~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~--- 315 (404)
T PRK09265 240 KAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWE--- 315 (404)
T ss_pred hhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH---
Confidence 9996 6999999995 444 33333211 123566778888888887742111 11221 22222333333
Q ss_pred HHHHhcCCee-eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 393 ALKDKYGIIG-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 393 ~l~~~~~~i~-~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
..++++.+. ..+..|+++++.+....... .. ....+.+.|.++||++.+
T Consensus 316 -~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~-~~--~~~~~~~~l~~~gv~v~p 365 (404)
T PRK09265 316 -LLNAIPGVSCVKPKGALYAFPKLDPKVYPI-HD--DEQFVLDLLLQEKVLLVQ 365 (404)
T ss_pred -HHhcCCCCcccCCCcceEEEEEecccccCC-CC--HHHHHHHHHHhCCEEEEC
Confidence 333343232 22445889988884321000 01 123466788899999864
No 193
>PLN02672 methionine S-methyltransferase
Probab=99.75 E-value=4.8e-16 Score=171.38 Aligned_cols=325 Identities=10% Similarity=0.032 Sum_probs=191.6
Q ss_pred EEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCC---ceEEEcCCHHH
Q 013235 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL---KVVFFTNSGTE 169 (447)
Q Consensus 93 l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~---~~v~~~~sGse 169 (447)
+.+.+|..+|++..|.. .++ .+|.|.+|+.+.+....+ .....+...++++.+++..+... ++|+++++.++
T Consensus 691 ~~~~~g~~vI~LsinE~--d~p-pPp~V~eAi~eal~~~~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e 765 (1082)
T PLN02672 691 VSGSQESSLIHMDVDES--FLP-VPSAVKASIFESFVRQNI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA 765 (1082)
T ss_pred CcccCCCCEEEEeCCCC--CCC-CCHHHHHHHHHHHhhcCC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence 45556788999988776 556 789999999887765433 11123457789999988765443 37889999888
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
++..+++... .+++.|++..++|......+... |...+..|......|..| .+++++.+..
T Consensus 766 lL~lll~aLl--~pGD~VLVp~PtY~~Y~~~a~~~-------------Ga~vv~Vpl~~e~gf~lD----~d~Le~al~~ 826 (1082)
T PLN02672 766 LFNKLVLCCV--QEGGTLCFPAGSNGTYVSAAKFL-------------KANFRRIPTKSSDGFKLT----AKTLASTLET 826 (1082)
T ss_pred HHHHHHHHHc--CCCCEEEEeCCChHHHHHHHHHc-------------CCEEEEEecccccCCCCC----HHHHHHHhcc
Confidence 8888776443 25688999999998766554433 233333332212234334 4667776642
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC--ccccc----ccC-CCC--CEE
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH--FWGFE----AHG-VVP--DIV 320 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~--~~~~~----~~g-v~p--Div 320 (447)
. .+.+.+|+.|.++++|.+. +++.+++|.++|++||++||+||+|.++-..+.. .+.+. .++ ..+ .++
T Consensus 827 ~--~~~~I~L~nPnhNPTG~v~-S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVI 903 (1082)
T PLN02672 827 V--KKPWVYISGPTINPTGLLY-SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVA 903 (1082)
T ss_pred C--CCCEEEEECcCCCCcCccC-CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEE
Confidence 1 2346888899767777655 8899999999999999999999999987665521 11111 111 112 233
Q ss_pred ---Eeecccc-CCccccccccC-HHHHHhhcCCcc-cccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH---H
Q 013235 321 ---TMAKGIG-NGIPLGAVVTT-PEIAEVLTRRNY-FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKER---L 391 (447)
Q Consensus 321 ---t~sK~lg-~G~pigav~~~-~~i~~~l~~~~~-~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~---L 391 (447)
+|||.++ +|+++||++++ +++++.+..... ...+..+.++.+++++.++ -+..++.+++++..+.++++ +
T Consensus 904 vL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~-~~~~~~~~~l~e~r~~Lk~rRd~L 982 (1082)
T PLN02672 904 LLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKN-QKSSDLLDGVAEQKKILKSRAERL 982 (1082)
T ss_pred EEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHh-ccCcHHHHHHHHHHHHHHHHHHHH
Confidence 5899988 69999999986 458887754211 1112222333333333331 01222333333332222222 2
Q ss_pred HHHHHhcCCeeeEee-cceeEEEEEeeCCC----CCCCC-----HHHHHHHHHHHHhC-Cceeecc
Q 013235 392 TALKDKYGIIGDVRG-RGFLLGVEFVTDRQ----LKTPA-----KAETLYIMDKMKGI-CALFFSQ 446 (447)
Q Consensus 392 ~~l~~~~~~i~~vrg-~Gl~~giel~~~~~----~~~p~-----~~~~~~~~~~l~~~-Gvlv~~~ 446 (447)
.+..++++. .-.+. .|+++++.+..-.. ...++ .....++++.|+++ ||++.++
T Consensus 983 ~e~L~~~Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PG 1047 (1082)
T PLN02672 983 KETLEACGW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSS 1047 (1082)
T ss_pred HHHHHHCCC-eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecC
Confidence 222233332 23344 36666665421000 00010 01145788888876 9998753
No 194
>PRK07908 hypothetical protein; Provisional
Probab=99.75 E-value=8.1e-16 Score=154.17 Aligned_cols=282 Identities=12% Similarity=0.094 Sum_probs=174.2
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
+..+|||..|.. +++ .++.+.+++.+.+... ..|+. ....+|.+.++++++.+.++|+++++++||+..+++
T Consensus 21 ~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~----~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNVR--HDT-PPEWLRERLAARLGDL----AAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCCC--CCC-CCHHHHHHHHHHhhHh----hcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh
Confidence 578999998775 345 6788999998887653 22443 356789999999887777899999999999998887
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (447)
. ..+++++..++|-+....+.. .|+..+..|... .|+.| .+.+ . + ++.
T Consensus 94 -l----~~~~viv~~P~y~~~~~~~~~-------------~G~~i~~v~~~~--~~~~d----~~~l----~---~-~~~ 141 (349)
T PRK07908 94 -L----RPRRAAVVHPSFTEPEAALRA-------------AGIPVHRVVLDP--PFRLD----PAAV----P---D-DAD 141 (349)
T ss_pred -c----CCCeEEEeCCCChHHHHHHHH-------------cCCEEEeeccCc--ccCcC----hhHh----c---c-CCC
Confidence 2 235777888988655432211 133333333221 13333 1222 2 1 233
Q ss_pred EEEE-ccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcc
Q 013235 257 GFLS-ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIP 331 (447)
Q Consensus 257 avi~-Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~p 331 (447)
++++ .| ++++|.+.+ .++|.++|++ ++++|+||+|..|. .| ........+ .++++ +|||.++ .|++
T Consensus 142 ~i~l~np-~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~l~~~~-~~~~i~i~S~SK~~~l~GlR 212 (349)
T PRK07908 142 LVVIGNP-TNPTSVLHP----AEQLLALRRP-GRILVVDEAFADAV-PG-EPESLAGDD-LPGVLVLRSLTKTWSLAGLR 212 (349)
T ss_pred EEEEcCC-CCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhc-cC-Ccccccccc-CCCEEEEeecccccCCccce
Confidence 4444 55 566777775 5678888864 78899999998773 23 222221122 23444 5799999 8999
Q ss_pred ccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe-ec
Q 013235 332 LGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKYGIIGDVR-GR 407 (447)
Q Consensus 332 igav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-g~ 407 (447)
+|++++++++++.+.... ..|..+++..+++.+.++--.. ++..++.++..+++.+.|++ ++ +.-.. ..
T Consensus 213 iG~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~-~~~~~p~~ 285 (349)
T PRK07908 213 VGYALGAPDVLARLTRGR--AHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VG-ARVVDPAA 285 (349)
T ss_pred eeeeecCHHHHHHHHhcC--CCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CC-cEeccCCC
Confidence 999999999998876432 2355566666555444420000 11233333444444444433 33 22222 56
Q ss_pred ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 408 Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
|+++++++.+ ...+.+.|.++||++.+
T Consensus 286 g~~~~~~~~~-----------~~~~~~~l~~~gI~v~~ 312 (349)
T PRK07908 286 APFVLVRVPD-----------AELLRKRLRERGIAVRR 312 (349)
T ss_pred ceEEEEECCc-----------HHHHHHHHHhCCEEEEE
Confidence 8899888731 24677888999999875
No 195
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.74 E-value=3.6e-16 Score=163.35 Aligned_cols=232 Identities=16% Similarity=0.137 Sum_probs=147.4
Q ss_pred CHHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhC------CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEE
Q 013235 117 HPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIIS 189 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~------~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~ 189 (447)
+..+.+++.+.++........|. .....+|.+.+++++ +.+.++|++++++++|+..+++.... ..++.|++
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~~gD~Vlv 168 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG-DPSDGVMI 168 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc-CCCCEEEE
Confidence 44677777665555321122233 224455666666553 23457899999999999999986531 25688999
Q ss_pred EcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC--CCCeE-EEEEccccCC
Q 013235 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT--SGHVA-GFLSESIQGV 266 (447)
Q Consensus 190 ~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~--~~~~a-avi~Epi~~~ 266 (447)
..++|.+....+... |...++.|......|+.| .++|++.+.... ..++. .+++.| +++
T Consensus 169 ~~P~y~~y~~~~~~~-------------g~~~v~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~k~l~l~~P-~NP 230 (481)
T PTZ00377 169 PIPQYPLYSAAITLL-------------GGKQVPYYLDEEKGWSLD----QEELEEAYEQAVRNGITPRALVVINP-GNP 230 (481)
T ss_pred CCCCchhHHHHHHHc-------------CCEEEEEEeccccCCCCC----HHHHHHHHHHHHhcCCCeeEEEEECC-CCC
Confidence 999998766544332 222233332222234445 566766664311 11444 566666 566
Q ss_pred CceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccC-CCcccccc--cCCCC------CEE---Eeeccc-c-CCccc
Q 013235 267 GGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG-SHFWGFEA--HGVVP------DIV---TMAKGI-G-NGIPL 332 (447)
Q Consensus 267 gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G-~~~~~~~~--~gv~p------Div---t~sK~l-g-~G~pi 332 (447)
+|.+. +.+.+++|.++|++||+++|.||+|..+...+ ..+-.+.. .+..+ .++ +|||.+ + .|+|+
T Consensus 231 TG~~~-s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 231 TGQVL-TRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred CCcCC-CHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 77665 78899999999999999999999998875432 11212110 11222 244 489986 5 69999
Q ss_pred ccccc---CHHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 333 GAVVT---TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 333 gav~~---~~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
||+++ ++++++.+.... ..+++.|++++.++.++|+
T Consensus 310 G~~~~~~~p~~li~~l~~~~-~~~~~~~~~~Q~a~~~~l~ 348 (481)
T PTZ00377 310 GYFELTNIPPEVREQIYKLA-SINLCSNVVGQLMTGLMCN 348 (481)
T ss_pred EEEEEeCCCHHHHHHHHHHh-heecCCChHHHHHHHHHhC
Confidence 99986 899988776532 2345688889998888884
No 196
>PLN02721 threonine aldolase
Probab=99.74 E-value=4.4e-16 Score=155.95 Aligned_cols=300 Identities=17% Similarity=0.131 Sum_probs=175.6
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
+++||.+|... ..+|.+.+|+.+. ...+. ..|+++...+|.++|++++.. +.++++++|++++..++....
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~--~~~~~-~~~~~~~~~~l~~~la~~~~~--~~~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA--EVDDD-VLGYDPTALRLEEEMAKIFGK--EAALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc--cCCCc-ccCCCHHHHHHHHHHHHHhCC--ceeEEecCccHHHHHHHHHHc
Confidence 57899988875 2678999988653 12221 235577789999999999954 457888999999988877543
Q ss_pred hhcCCCeEEEEcCCcccCchh--hhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCC
Q 013235 180 LYTGCNDIISLRNAYHGNAAG--TMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGH 254 (447)
Q Consensus 180 ~~t~~~~ii~~~~~yHG~~~~--~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~ 254 (447)
. .+++.|++.+++|...... ... ..|+.....|... .+..| .+++++.+.+.. ..+
T Consensus 77 ~-~~gd~Vl~~~~~~~~~~~~~~~~~------------~~g~~~~~v~~~~--~~~~d----~~~l~~~i~~~~~~~~~~ 137 (353)
T PLN02721 77 D-VRGSEVILGDNSHIHLYENGGIST------------LGGVHPRTVKNNE--DGTMD----LDAIEAAIRPKGDDHFPT 137 (353)
T ss_pred c-CCCCeEEEcCccceehhcccchhh------------hcCceeEecCCCc--CCCcC----HHHHHHHHHhccCCCCCc
Confidence 2 1457888888886322211 111 1133333222211 12234 567777775321 136
Q ss_pred eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC-CcccccccCCCCC--EEEeeccccCCcc
Q 013235 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS-HFWGFEAHGVVPD--IVTMAKGIGNGIP 331 (447)
Q Consensus 255 ~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~-~~~~~~~~gv~pD--ivt~sK~lg~G~p 331 (447)
++++++++++++.|...++.+.+++|.++|++||+++|+||++. ++-... .. .........| +++++|++++ |
T Consensus 138 ~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~-~~~~~~~~~d~~~~s~sK~l~~--~ 213 (353)
T PLN02721 138 TRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGV-PVHRLVKAADSVSVCLSKGLGA--P 213 (353)
T ss_pred ceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCC-CHHHHhhhCCEEEEecccccCC--c
Confidence 78899988766543344578899999999999999999999985 321100 00 0111111234 4468899874 5
Q ss_pred ccc-cccCHHHHHhhcCCcccccCCCC----hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee--eE
Q 013235 332 LGA-VVTTPEIAEVLTRRNYFNTFGGN----PVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG--DV 404 (447)
Q Consensus 332 iga-v~~~~~i~~~l~~~~~~~T~~~n----p~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~--~v 404 (447)
+|+ +++++++++.+... ..++++. +..+++++.+++...+ ..++..++.+++.+.|+++ +.+. -.
T Consensus 214 ~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~----~~~~~~~~ 285 (353)
T PLN02721 214 VGSVIVGSKSFIRKAKRL--RKTLGGGMRQVGVLAAAALVALQENVP--KLEDDHKKAKLLAEGLNQI----KGLRVNVA 285 (353)
T ss_pred eeeEEecCHHHHHhHHHH--HHhcCCCeehhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhC----CCcEEecC
Confidence 676 56788887765431 1222221 2333444445543211 1233344556666666554 2221 11
Q ss_pred eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 405 rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+..+.|+.+++.... + .....+.+.|.++||.+.+
T Consensus 286 ~~~~~~~~~~~~~~~----~--~~~~~~~~~L~~~gi~v~~ 320 (353)
T PLN02721 286 AVETNIVYFDITDGS----R--ITAEKLCKSLEEHGVLLMP 320 (353)
T ss_pred CccceEEEEEccCCc----c--ccHHHHHHHHHhCCcEEec
Confidence 234567777774210 0 1246789999999999874
No 197
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=1.3e-16 Score=160.99 Aligned_cols=269 Identities=15% Similarity=0.111 Sum_probs=163.5
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
.|+++...+|.+.|+++++.+.++|++++++++++..+++.... .+++.|++.+++|-.....+..
T Consensus 55 ~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~-~g~~~vlv~~p~y~~~~~~~~~------------- 120 (364)
T PRK04781 55 RYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV-PGRDAVLVTPPVFGMYAVCARL------------- 120 (364)
T ss_pred cCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHHHHH-------------
Confidence 35555567899999999877778899999999999999875421 2335677777876422221111
Q ss_pred CCeEeecCCCC-cCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 217 TGVHHALNPDP-YRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 217 ~g~~~~~~p~~-~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
.|...++.|.. ....|..| .+++++.+.. + ++.++++...++++|.+. +.+.++++.+.|+ +++++|+||
T Consensus 121 ~g~~~~~v~~~~~~~~~~~d----~~~l~~~~~~--~-~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~De 191 (364)
T PRK04781 121 QNAPLVEVPLVDGADGFHAD----VPAIVAAALA--S-NAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDE 191 (364)
T ss_pred cCCEEEEEecCCCccCCCcC----HHHHHHHHhc--c-CCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeC
Confidence 12333333321 11112223 3444332221 2 344555545567778776 4556666666664 479999999
Q ss_pred cccCccccCCCcccccccCCCCCEE---Eeecccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
+|..|.... .. ....+..+.++ +|||.+| .|+|+||+++++++++.+.... .+|+.+.+++.++.+.|+.-
T Consensus 192 ay~~f~~~~-~~--~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~--~~~~~~~~~~~~a~~~l~~~ 266 (364)
T PRK04781 192 AYGEFSDVP-SA--VGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQ--APYPVPTPCAALAEQALSAP 266 (364)
T ss_pred cchhhcCCc-ch--HHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcc
Confidence 999885322 11 12223345555 6999999 8999999999999999887532 46778888888877777421
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCe-eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 372 QKDKLQNNAHVVGSYLKERLTALKDKYGII-GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 372 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i-~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
..+.+.+.++.. +.-++.+.+..++++.+ ...+..|+++++++.+ ..++.+.|.++||++++
T Consensus 267 ~~~~~~~~~~~~-~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~-----------~~~~~~~l~~~gI~v~~ 329 (364)
T PRK04781 267 ALAVTARRVAEV-RAERERLHAALAQLPGVRRVYPSQGNFLLVRFDD-----------AEAAFQALLAAGVVVRD 329 (364)
T ss_pred cHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------HHHHHHHHHHCCeEEee
Confidence 001122222222 22233333333344322 2356779999998731 35678889999999975
No 198
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.73 E-value=3.8e-16 Score=159.57 Aligned_cols=311 Identities=14% Similarity=0.091 Sum_probs=177.7
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc--ccccc-cchHHHHHHHHHHHhC---CCCCceEEEcCCHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH--STVLY-LNHAIADFAEALASKM---PGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~--~~~~~-~~~~~~elae~L~~~~---~~~~~~v~~~~sGseA~ 171 (447)
+..++|+..|.. .++ ..|.+.+++.+.++.... ....| +.....+|.+.+++.+ ....++|++++++++++
T Consensus 32 ~~~~i~l~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDT--TQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 567889887765 334 468889999888776421 11224 3445667777777753 34567899999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe-EeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV-HHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~-~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
.....+ ..+++.|++.+++|.+....+...+... .... ...+ ..++.|......|..| +++ .
T Consensus 109 ~~l~~l---~~~gd~Vlv~~P~y~~~~~~~~~~g~~~-~~~~--~~~~~~~~~v~~~~~~~~~~~-------~~~---~- 171 (402)
T TIGR03542 109 FRLQSL---FGSDNTVAVQDPVYPAYVDSNVMAGRAG-VLDD--DGRYSKITYLPCTKENNFIPD-------LPE---E- 171 (402)
T ss_pred HHHHHh---cCCCCEEEEeCCCCcchHHHHHHcCCcc-cccc--ccccceEEEeecchhhCCCCC-------ccc---c-
Confidence 875432 3456789999999998876554433211 0000 0001 2222221111112111 111 1
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccC---CCCCEEEeeccc
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHG---VVPDIVTMAKGI 326 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~g---v~pDivt~sK~l 326 (447)
+ ++.++++...++++|.+. +.+.+++|.++|++||+++|+||+|..|...+...... ...+ ....+-+|||.+
T Consensus 172 -~-~~~~i~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 172 -P-KIDIIYLCSPNNPTGTVL-TKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred -C-CceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCcccc
Confidence 1 334444434456677655 78889999999999999999999999885433111111 1111 111233699999
Q ss_pred c-CCccccccccCHHHH--------HhhcCCcccccC-CCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHH
Q 013235 327 G-NGIPLGAVVTTPEIA--------EVLTRRNYFNTF-GGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTA 393 (447)
Q Consensus 327 g-~G~pigav~~~~~i~--------~~l~~~~~~~T~-~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~ 393 (447)
| .|+++|+++++++++ ..+.. ....++ +.+++++.++.+.|+.-..+ +..+..++..+.+.+.|++
T Consensus 249 g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 327 (402)
T TIGR03542 249 GFTGVRLGWTVVPKELTYADGHSVIQDWER-RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA 327 (402)
T ss_pred CCCCcceEEEEecHHHhhcchhhHHHHHHH-HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 899999999998876 22211 111233 35677777766666411001 1122233333344444433
Q ss_pred HHHhcCCeeeEee-cceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeec
Q 013235 394 LKDKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFS 445 (447)
Q Consensus 394 l~~~~~~i~~vrg-~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~ 445 (447)
++ +.-..+ .|+++++++... ....++++.|+ +.||++.+
T Consensus 328 ----~~-~~~~~~~~~~f~~v~l~~~--------~~~~~l~~~l~~~~gv~v~p 368 (402)
T TIGR03542 328 ----AG-FKVYGGEHAPYLWVKTPEG--------ISSWDFFDFLLYQYHVVGTP 368 (402)
T ss_pred ----cC-ceecCCCceeEEEEECCCC--------CCHHHHHHHHHHhCCEEEeC
Confidence 33 222233 477999987321 01346788877 56999875
No 199
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.73 E-value=6.8e-16 Score=161.23 Aligned_cols=267 Identities=14% Similarity=0.066 Sum_probs=153.3
Q ss_pred CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCC
Q 013235 156 GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD 235 (447)
Q Consensus 156 ~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d 235 (447)
.+.++|++++++++|++.+++... .+++.|++.+++|.+........ .|+..++.|......|+.|
T Consensus 117 v~pe~Ivit~Ga~~al~~l~~~l~--~pGD~Vlv~~P~Y~~~~~~~~~~------------~G~~vv~v~~~~~~~~~~~ 182 (496)
T PLN02376 117 FDPERVVMSGGATGANETIMFCLA--DPGDVFLIPSPYYAAFDRDLRWR------------TGVEIIPVPCSSSDNFKLT 182 (496)
T ss_pred CChhhEEEccchHHHHHHHHHHhC--CCCCEEEECCCCccchHHHHHhh------------CCCEEEEEeCCCCccCcCC
Confidence 456789999999999999988543 25688999999998765432211 1333444333222334445
Q ss_pred hHHHHHHHHHHHHccCCCCeE-EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cc-
Q 013235 236 GEMYAKDVQDLIDFGTSGHVA-GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EA- 312 (447)
Q Consensus 236 ~~~~~~~le~~i~~~~~~~~a-avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~- 312 (447)
.+.+.+.+++..+. ..++. .+|+.| ++++|.+. +.+.+++|.++|++|++++|+||+|..+.+.+..+-.. +.
T Consensus 183 ~~~le~a~~~a~~~--~~~~k~l~l~nP-~NPTG~~~-s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~ 258 (496)
T PLN02376 183 VDAADWAYKKAQES--NKKVKGLILTNP-SNPLGTML-DKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVV 258 (496)
T ss_pred HHHHHHHHHHHHhc--CCCeeEEEEcCC-CCCCCccC-CHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhh
Confidence 33322222222211 12455 444555 55667655 78899999999999999999999999875555222121 11
Q ss_pred --cC---CCCCE----EEeecccc-CCcccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH-HHH
Q 013235 313 --HG---VVPDI----VTMAKGIG-NGIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ-NNA 380 (447)
Q Consensus 313 --~g---v~pDi----vt~sK~lg-~G~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~-~~~ 380 (447)
++ ..||. -+|||.+| .|+++|++++ ++.+.+.+.... ..+..+.+++.++.+.|+ ++++. +++
T Consensus 259 ~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~--~~~~vs~~~Q~a~~~~L~---d~~~~~~~l 333 (496)
T PLN02376 259 NDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS--SFGLVSSQTQLMLASMLS---DDQFVDNFL 333 (496)
T ss_pred ccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh--hcCCCCHHHHHHHHHHhC---ChhHHHHHH
Confidence 11 12442 26899998 8999999998 466666543221 112356677666666553 43442 233
Q ss_pred HHHHHHHHHH---HHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-Cceeecc
Q 013235 381 HVVGSYLKER---LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-CALFFSQ 446 (447)
Q Consensus 381 ~~~g~~l~~~---L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~~ 446 (447)
+++.+.++++ +.+..+++++.......|+++++++...-.. ...-+...++++.++++ ||.+.++
T Consensus 334 ~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~-~~~~~~e~~l~~~ll~~~gV~v~pG 402 (496)
T PLN02376 334 MESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRD-RNSFESEIELWHIIIDKVKLNVSPG 402 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhcc-CCchhHHHHHHHHHHHcCCEEEeCc
Confidence 3333333322 2222333332211234569999998432100 01111235688888764 9998753
No 200
>PRK10534 L-threonine aldolase; Provisional
Probab=99.72 E-value=4.4e-16 Score=154.99 Aligned_cols=291 Identities=15% Similarity=0.135 Sum_probs=171.7
Q ss_pred EEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
.|||.++.++ | .+|.+.+|+.+..... ..| +++...+|.++|+++++ .+.+++++||++++..++...
T Consensus 1 ~~~~~~~~~~---~-p~~~~~~a~~~~~~~~----~~Y~~~~~~~~L~~~la~~~g--~~~~~v~~~g~~a~~~~l~~~- 69 (333)
T PRK10534 1 MIDLRSDTVT---R-PSRAMLEAMMAAPVGD----DVYGDDPTVNALQDYAAELSG--KEAALFLPTGTQANLVALLSH- 69 (333)
T ss_pred CcccccccCC---C-CCHHHHHHHHhccCCC----cccCCCHHHHHHHHHHHHHhC--CCeEEEeCchHHHHHHHHHHh-
Confidence 3789888764 3 7899999987654332 345 68889999999999985 455678999999988888743
Q ss_pred hhcCCCeEEEEcCCcccCch-hhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC--CCCeE
Q 013235 180 LYTGCNDIISLRNAYHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT--SGHVA 256 (447)
Q Consensus 180 ~~t~~~~ii~~~~~yHG~~~-~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~--~~~~a 256 (447)
. .++++|++..++|..... ...... .+...++.+. ...|..| .++|++.+.... ..++.
T Consensus 70 ~-~~gd~vi~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~d----~~~l~~~i~~~~~~~~~~~ 131 (333)
T PRK10534 70 C-ERGEEYIVGQAAHNYLYEAGGAAVL-----------GSIQPQPIDA--AADGTLP----LDKVAAKIKPDDIHFARTR 131 (333)
T ss_pred c-CCCCeeEEechhhhhHhcCCchHHh-----------cCceEEeecC--CCCCCCC----HHHHHHhhcccCcCcccce
Confidence 2 244677766555421110 000000 0122222221 1123334 456666653210 01344
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcccc---CCCcccccccCCCCC--EEEeeccccCCcc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART---GSHFWGFEAHGVVPD--IVTMAKGIGNGIP 331 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~---G~~~~~~~~~gv~pD--ivt~sK~lg~G~p 331 (447)
+|+++. + ++|.+. +.+.+++|.++|++||+++|+||++. |+.. +... ......+| +++|||+++ ++
T Consensus 132 lv~l~n-p-~~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~---~~~~~~~~~~~~s~SK~~~--~~ 202 (333)
T PRK10534 132 LLSLEN-T-HNGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL---KEITQYCDSFTICLSKGLG--TP 202 (333)
T ss_pred EEEEec-C-CCCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH---HHHHhcCCEEEEEeEcCCC--Cc
Confidence 555552 2 246665 67778899999999999999999976 5322 2111 11111223 457999775 35
Q ss_pred cc-ccccCHHHHHhhcCCcccc--cCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecc
Q 013235 332 LG-AVVTTPEIAEVLTRRNYFN--TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRG 408 (447)
Q Consensus 332 ig-av~~~~~i~~~l~~~~~~~--T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G 408 (447)
+| ++++++++++.+....... .+..+.++++++.++|+.. .+..++..+..+++.+.|+++ ++ .-.+..+
T Consensus 203 ~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~----g~-~~~~~~~ 275 (333)
T PRK10534 203 VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREA----GA-DVMRQDT 275 (333)
T ss_pred ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhC----CC-ccCCCCc
Confidence 78 5778999998776432211 1223446677777777532 123333334455666666664 22 2234468
Q ss_pred eeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 409 l~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.|+.+.+... ...++.+.|+++||++++
T Consensus 276 nfv~~~~~~~---------~~~~~~~~l~~~gi~v~~ 303 (333)
T PRK10534 276 NMLFVRVGEE---------QAAALGEYMRERNVLINA 303 (333)
T ss_pred eEEEEECCch---------hHHHHHHHHHHcCeeecC
Confidence 8888776310 135678889999999975
No 201
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.72 E-value=2e-15 Score=155.90 Aligned_cols=321 Identities=14% Similarity=0.151 Sum_probs=179.8
Q ss_pred EEecC--CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc----------ccc----ccccchHHHHHHHHHHHhC--
Q 013235 93 LFDEN--GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ----------HST----VLYLNHAIADFAEALASKM-- 154 (447)
Q Consensus 93 l~d~d--G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~----------~~~----~~~~~~~~~elae~L~~~~-- 154 (447)
.||.+ -+-||++...-+.. ++..+.+-+.+..+... +.. ..+......++++.+.+.+
T Consensus 39 ~~~~~~np~g~i~l~~aeN~l----~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~ 114 (447)
T PLN02607 39 PYDESHNPSGVIQMGLAENQV----SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGG 114 (447)
T ss_pred CCCcccCCCceEEEechhhhh----hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCC
Confidence 35553 33588887655543 56677776666443110 000 0112223344444444432
Q ss_pred --CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCC
Q 013235 155 --PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (447)
Q Consensus 155 --~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (447)
+.+.++|++++++++|++.++.... ..++.|++..+.|.+........ .|+..++.+......|
T Consensus 115 ~~~v~p~~Ivit~G~t~al~~l~~~l~--~pGD~Vlv~~P~Y~~f~~~~~~~------------~g~~vv~v~~~~~~~f 180 (447)
T PLN02607 115 KARFDPDRIVLTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWR------------TGVKIVPIHCDSSNNF 180 (447)
T ss_pred CCCcCHHHeEEcCChHHHHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhc------------CCcEEEEEeCCCCCCC
Confidence 2355789999999999999876432 35688999999997765432111 1333444332222334
Q ss_pred CCChHHHHHHHHHHHHcc--CCCCeE-EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccc
Q 013235 233 GADGEMYAKDVQDLIDFG--TSGHVA-GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~--~~~~~a-avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~ 309 (447)
..| .+.+++.+... ...++. .++..| +++.|.+ .+++.+++|.++|++|++.+|+||+|.++-..+..+-.
T Consensus 181 ~~~----~~~le~a~~~a~~~~~~vk~lll~nP-~NPtG~~-~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S 254 (447)
T PLN02607 181 QVT----PQALEAAYQEAEAANIRVRGVLITNP-SNPLGAT-VQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVS 254 (447)
T ss_pred cCC----HHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcCcc-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCccc
Confidence 345 44555554321 122454 555556 4556654 47899999999999999999999999874333312222
Q ss_pred c-c---ccCC-C-CC-EE---Eeecccc-CCcccccccc-CHHHHHhhcCCcccccC-CCChHHHHHHHHHHHHHhhhhH
Q 013235 310 F-E---AHGV-V-PD-IV---TMAKGIG-NGIPLGAVVT-TPEIAEVLTRRNYFNTF-GGNPVCTAAGHAVLKVIQKDKL 376 (447)
Q Consensus 310 ~-~---~~gv-~-pD-iv---t~sK~lg-~G~pigav~~-~~~i~~~l~~~~~~~T~-~~np~a~aaala~L~~i~~~~l 376 (447)
. + ..+. . ++ ++ +|||.+| +|+|+|++++ ++++.+.+... ..| ..+.+++.++.+.| +++++
T Consensus 255 ~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~---~~~~~~s~~~q~~~~~~L---~d~~~ 328 (447)
T PLN02607 255 VAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM---SSFTLVSSQTQHLLASML---SDEEF 328 (447)
T ss_pred HHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHH---hhcCCCCHHHHHHHHHHh---CCchh
Confidence 1 1 1111 1 33 33 5899998 8999999998 67777665432 223 23556665555554 34444
Q ss_pred H-HHHHHHHHHHHHH---HHHHHHhcCCeeeEe-ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh-CCceeecc
Q 013235 377 Q-NNAHVVGSYLKER---LTALKDKYGIIGDVR-GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG-ICALFFSQ 446 (447)
Q Consensus 377 ~-~~~~~~g~~l~~~---L~~l~~~~~~i~~vr-g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~-~Gvlv~~~ 446 (447)
. +.++.+.++++++ +.+..+++++ ..++ ..|+++++++.+.- ..+..+...++++.+++ .||++.++
T Consensus 329 ~~~~l~~~r~~l~~~~~~~~~~L~~~gi-~~~~~~ag~fvw~~L~~~~--~~~~~~~e~~l~~~ll~~~gV~v~pG 401 (447)
T PLN02607 329 TENYIRTNRERLRKRYEMIVQGLRRAGI-ECLKGNAGLFCWMNLSPLL--ETPTREGELALWDSILREVKLNISPG 401 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcccCCeeEEEEEEchHhh--cCCCchhHHHHHHHHHHhCCEEEcCc
Confidence 3 3344444444333 2223333443 2233 35899999984311 01111223467877775 69998753
No 202
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.72 E-value=5.8e-16 Score=158.33 Aligned_cols=312 Identities=13% Similarity=0.095 Sum_probs=176.4
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc--cccccc-cchHHHHHHHHHHHhCC------CCCceEE--EcCCH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLY-LNHAIADFAEALASKMP------GNLKVVF--FTNSG 167 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~--~~~~~~-~~~~~~elae~L~~~~~------~~~~~v~--~~~sG 167 (447)
...+|+..|.... .. .++.+.+++.+.+.... .....| +.....+|++.+++++. ...++|. .+++|
T Consensus 29 ~~~i~l~~g~~~~-~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRD-EN-GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeEC-CC-CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 3557877665311 11 22334445555442211 011123 23455667777776542 1345676 48899
Q ss_pred HHHHHHHHHHHHhh-cCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHH
Q 013235 168 TEANELAIMMARLY-TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (447)
Q Consensus 168 seA~e~Aik~ar~~-t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (447)
++|++.++.+.+.. ..++.|++.+++|++....+... |...++.|......|+.| .+.+++.
T Consensus 107 ~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~l~~~~~~~~d----~~~l~~~ 169 (404)
T PTZ00376 107 TGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSA-------------GLNVKEYRYYDPKTKGLD----FDGMLED 169 (404)
T ss_pred chHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-------------CCceeeccccCcccCCcC----HHHHHHH
Confidence 99999998765443 35688999999998877655433 222333332111124444 5666666
Q ss_pred HHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC--Cccccccc-CCCCCEE---
Q 013235 247 IDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS--HFWGFEAH-GVVPDIV--- 320 (447)
Q Consensus 247 i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~--~~~~~~~~-gv~pDiv--- 320 (447)
+.+..+ +..++++...++++|.+. +++.+++|.++|++||+++|.||+|.+|...+. .......+ +..+.++
T Consensus 170 ~~~~~~-~~~~~~~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 247 (404)
T PTZ00376 170 LRTAPN-GSVVLLHACAHNPTGVDP-TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQ 247 (404)
T ss_pred HHhCCC-CCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 654322 234555454566677665 788999999999999999999999998865330 01011111 1112333
Q ss_pred Eeecccc-CCcccccc---ccCHHHHHhhcCC---cccccCCC-ChHHHHHHHHHHHHHh-hhhH-------HHHHHHHH
Q 013235 321 TMAKGIG-NGIPLGAV---VTTPEIAEVLTRR---NYFNTFGG-NPVCTAAGHAVLKVIQ-KDKL-------QNNAHVVG 384 (447)
Q Consensus 321 t~sK~lg-~G~pigav---~~~~~i~~~l~~~---~~~~T~~~-np~a~aaala~L~~i~-~~~l-------~~~~~~~g 384 (447)
+|||.++ .|+|+||+ ++++++++.+... ...++++. +++++.++.+.|+.-+ .+++ .+++++..
T Consensus 248 SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r 327 (404)
T PTZ00376 248 SFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMR 327 (404)
T ss_pred eCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999 89999998 5788765544221 12234443 5677777777774210 0112 22334444
Q ss_pred HHHHHHHHHHHHhcC-CeeeE-eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-Cceeecc
Q 013235 385 SYLKERLTALKDKYG-IIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-CALFFSQ 446 (447)
Q Consensus 385 ~~l~~~L~~l~~~~~-~i~~v-rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~~ 446 (447)
+.+.+.|+++ ..+ .+..+ +..|+++++++. .+++++|+++ ||++.++
T Consensus 328 ~~l~~~L~~~--~~~~~~~~~~p~gg~f~~~~~~-------------~~~~~~L~~~~~v~v~p~ 377 (404)
T PTZ00376 328 QLLYDELKAL--GSPGDWEHIINQIGMFSFTGLT-------------KEQVERLIEKYHIYLLDN 377 (404)
T ss_pred HHHHHHHHhc--CCCCcccccccCceEEEecCCC-------------HHHHHHHHHhCCEeecCC
Confidence 4444444443 111 11112 334677777651 3577788877 9987653
No 203
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.72 E-value=2.2e-15 Score=153.25 Aligned_cols=300 Identities=14% Similarity=0.080 Sum_probs=176.6
Q ss_pred cCCCCCHHHHHHHHHHHHhcccc------cccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCC
Q 013235 112 CCGHCHPYVVDSIVNQIKRIQHS------TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCN 185 (447)
Q Consensus 112 ~lGh~~p~v~~A~~~~l~~~~~~------~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~ 185 (447)
-+|..++.+.+|+.+........ ......+...++.+.++++++. +.++|++||++|+..+++... .+++
T Consensus 28 ~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--~~~~~~~g~t~a~~~al~~l~--~~gd 103 (387)
T PRK09331 28 RGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--DEARVTHGAREGKFAVMHSLC--KKGD 103 (387)
T ss_pred cCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--CCCC
Confidence 46778899999998877543221 1122355788999999999854 568899999999999997653 3556
Q ss_pred eEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc---CCCCeEEEEEcc
Q 013235 186 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG---TSGHVAGFLSES 262 (447)
Q Consensus 186 ~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~---~~~~~aavi~Ep 262 (447)
+|++...++.+.. .++... |+..+..|......+..| .+++++.+... ...++.+|+++.
T Consensus 104 ~Vlv~~~~h~s~~-~~~~~~------------G~~~~~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 104 YVVLDGLAHYTSY-VAAERA------------GLNVREVPKTGYPEYKIT----PEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred EEEECCCchHHHH-HHHHHc------------CCEEEEEeCccCcCCCcC----HHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 7777665544332 222221 222222221000112234 45666666532 113577888888
Q ss_pred ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE--EeeccccCCccccccccCHH
Q 013235 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPE 340 (447)
Q Consensus 263 i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pigav~~~~~ 340 (447)
+.++.|.+.+ +++|.++|+++|+++|+||+|+ +|..+ +....+|+ |++ +++|.++++.++|+++++++
T Consensus 167 ~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~---~~~~~~g~--D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 167 VDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP---VDGKKLGA--DFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred CCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC---CCHHHcCC--CEEEeeCcccccCCCCEEEEEECHH
Confidence 8888888876 9999999999999999999996 44222 11223344 665 57799998778999999999
Q ss_pred HHHhhcCCc--cc----ccCC--CChHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeE
Q 013235 341 IAEVLTRRN--YF----NTFG--GNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (447)
Q Consensus 341 i~~~l~~~~--~~----~T~~--~np~a~aaala~L~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~ 411 (447)
+++.+.... +. ..++ -.+...++++++|+.+.+. +..++..+..+++++.|.++. .+.++.+-.....++
T Consensus 237 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~-g~~~~~~~~~~~~i~ 315 (387)
T PRK09331 237 YADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE-GFKQLGEKPRNHDLM 315 (387)
T ss_pred HHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEeccCcCcCCeE
Confidence 888764421 10 0122 2233455556667655432 233445566677777776651 111111101223344
Q ss_pred EEEEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 412 GVEFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 412 giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
.++...-............++.+.|+++||..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~ 347 (387)
T PRK09331 316 KFETPSFDEIAKKHKRRGFFLYEELKKRGIHG 347 (387)
T ss_pred EEeCCchhHHhhhccccchhHHHHHHHcCceE
Confidence 44321000000000112356889999999983
No 204
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.72 E-value=2.2e-15 Score=153.51 Aligned_cols=303 Identities=14% Similarity=0.110 Sum_probs=178.3
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhC------CCCCceEEEcCCHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM------PGNLKVVFFTNSGTEA 170 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~------~~~~~~v~~~~sGseA 170 (447)
+...+||..|... +. .++.+.+++.+.++........| ......++.+.+++++ +.+.++|+++++++++
T Consensus 32 ~~~~~~l~~g~p~--~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a 108 (394)
T PRK06836 32 ADNVFDFSLGNPS--VP-PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA 108 (394)
T ss_pred CCCeEEecCcCCC--CC-CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence 3457899877542 22 56788888877665321111223 2334445555555543 2345789999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+..+++... ..++.|++.+++|.+........ |+.....|.... .++.| .+++++.+..
T Consensus 109 l~~~~~~l~--~~gd~Vli~~p~~~~~~~~~~~~-------------g~~v~~v~~~~~-~~~~d----~~~l~~~~~~- 167 (394)
T PRK06836 109 LNVALKAIL--NPGDEVIVFAPYFVEYRFYVDNH-------------GGKLVVVPTDTD-TFQPD----LDALEAAITP- 167 (394)
T ss_pred HHHHHHHhc--CCCCEEEEcCCCCccHHHHHHHc-------------CCEEEEEecCCc-cCcCC----HHHHHhhcCc-
Confidence 999887542 35678999999887754433211 222222222111 12334 5667766642
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH------hCCEEEEeccccCccccCCCcccccccCCCCCEE---E
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK------AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---T 321 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~------~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t 321 (447)
++.++++...++++|.+. +.+.+++|.++|++ ||+++|+||+|..|-..|...... ....++++ +
T Consensus 168 ---~~~~v~~~~p~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S 241 (394)
T PRK06836 168 ---KTKAVIINSPNNPTGVVY-SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYI--FKYYDNSIVVYS 241 (394)
T ss_pred ---CceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCCh--HHccCcEEEEec
Confidence 455666655577777765 67888999999999 899999999999885444211111 11122333 4
Q ss_pred eecccc-CCccccccccCHHHHHh---hcCCc----ccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 013235 322 MAKGIG-NGIPLGAVVTTPEIAEV---LTRRN----YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTA 393 (447)
Q Consensus 322 ~sK~lg-~G~pigav~~~~~i~~~---l~~~~----~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~ 393 (447)
|||.++ .|+++|++++++++.+. ..... ....++.+++.+.++...++ +....+..++..+.+.+.|++
T Consensus 242 ~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~~ 318 (394)
T PRK06836 242 FSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLTE 318 (394)
T ss_pred chhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHh
Confidence 899999 79999999999876432 11110 11223456666666655553 222233444455555555544
Q ss_pred HHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 394 LKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 394 l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
++.....+..|+++++.+... ...++++.|.++||.+.+.
T Consensus 319 ----~g~~~~~~~gg~~~~~~~~~~---------~~~~~~~~l~~~gv~v~~g 358 (394)
T PRK06836 319 ----LGFECVKPQGAFYLFPKSPEE---------DDVAFCEKAKKHNLLLVPG 358 (394)
T ss_pred ----CCCEeecCCceEEEEEeCCCC---------CHHHHHHHHHhCCEEEECc
Confidence 332212233477887765221 1356778889999998753
No 205
>PLN02368 alanine transaminase
Probab=99.71 E-value=1.1e-15 Score=155.89 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=136.7
Q ss_pred HHHHHHHHHHhC----C--CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 143 IADFAEALASKM----P--GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 143 ~~elae~L~~~~----~--~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
..+|.+.|++++ + ...++|++++++++++..+++.... ..++.|++.+++|......+...
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~pGd~Vli~~P~Y~~y~~~~~~~------------ 175 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR-GEKDGVLVPVPQYPLYSATISLL------------ 175 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC-CCCCEEEEeCCCCccHHHHHHHc------------
Confidence 345555555443 2 3457899999999999998875431 25688999999998776554332
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC-C-CCe-EEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT-S-GHV-AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~-~-~~~-aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
|...++.|......|+.| .+++++.+.... . .++ +.+++.| ++++|.+. +.+.+++|.++|++||+++|.
T Consensus 176 -g~~~v~v~~~~~~~~~~d----~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v~-s~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 176 -GGTLVPYYLEESENWGLD----VNNLRQSVAQARSKGITVRAMVIINP-GNPTGQCL-SEANLREILKFCYQERLVLLG 248 (407)
T ss_pred -CCEEEEEecccccCCCCC----HHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCccC-CHHHHHHHHHHHHHcCCEEEE
Confidence 223333332222234445 566776665311 1 134 4667778 55677665 789999999999999999999
Q ss_pred eccccCccccCC-Ccccc-ccc-CC------CCCEE---Eeeccc-c-CCccccccc---cCHHHHHhhcCCcccccCCC
Q 013235 294 DEVQAGFARTGS-HFWGF-EAH-GV------VPDIV---TMAKGI-G-NGIPLGAVV---TTPEIAEVLTRRNYFNTFGG 356 (447)
Q Consensus 294 DEv~tGfgr~G~-~~~~~-~~~-gv------~pDiv---t~sK~l-g-~G~pigav~---~~~~i~~~l~~~~~~~T~~~ 356 (447)
||+|..|...|. .+... +.. ++ .+.++ +|||.+ + .|+|+||++ +++++++.+... ...+++.
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~-~~~~~~~ 327 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKV-ASIALSP 327 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHH-hcccCCC
Confidence 999998865442 12121 110 11 12344 479999 4 799999998 488888877654 2346778
Q ss_pred ChHHHHHHHHHHH
Q 013235 357 NPVCTAAGHAVLK 369 (447)
Q Consensus 357 np~a~aaala~L~ 369 (447)
|.+++.++.++|+
T Consensus 328 ~~~~Q~aa~~~l~ 340 (407)
T PLN02368 328 NVSGQIFMGLMVN 340 (407)
T ss_pred CcHHHHHHHHHhC
Confidence 8899999988885
No 206
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.71 E-value=1.5e-15 Score=151.26 Aligned_cols=296 Identities=20% Similarity=0.134 Sum_probs=174.4
Q ss_pred EecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc
Q 013235 103 DAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT 182 (447)
Q Consensus 103 D~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t 182 (447)
||.|.. ++| .+|.+.+++.+.+... ...++.+...++++.+++.+. .+.++++++|++|+..+++... .
T Consensus 1 ~~~~~~---~~~-~~~~v~~a~~~~~~~~---~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~--~ 69 (338)
T cd06502 1 DFRSDT---VTG-PTPEMLEAMAAANVGD---DVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHT--Q 69 (338)
T ss_pred Cccccc---CCC-CCHHHHHHHHhcccCC---cccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhc--C
Confidence 555533 567 8899999998765322 122356778899999999986 4567889999999999998653 3
Q ss_pred CCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCCeEEEE
Q 013235 183 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGHVAGFL 259 (447)
Q Consensus 183 ~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~~aavi 259 (447)
+++.|++..++| .......... ...|+.....|.. .+..| .+++++.+.... ..++++++
T Consensus 70 ~gd~v~~~~~~~-~~~~~~~~~~---------~~~g~~~~~v~~~---~~~~d----~~~l~~~i~~~~~~~~~~~~~v~ 132 (338)
T cd06502 70 PGGSVICHETAH-IYTDEAGAPE---------FLSGVKLLPVPGE---NGKLT----PEDLEAAIRPRDDIHFPPPSLVS 132 (338)
T ss_pred CCCeEEEecCcc-eeeecCCcHH---------HHcCceEEeecCC---CCcCC----HHHHHHHhhccCCCcCCcceEEE
Confidence 456677655544 3221110000 0012222222221 12234 566777765321 12456666
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcc--ccCCCcccccccCCCCCEE--EeeccccCCccccc-
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA--RTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGA- 334 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfg--r~G~~~~~~~~~gv~pDiv--t~sK~lg~G~piga- 334 (447)
++..++.||.. +.+.+++|.++|+++|+++|+||+|..+. ..| . ........+|++ +++|.++ .|.|+
T Consensus 133 l~~p~n~g~~~--~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~-~--~~~~~~~~~d~~~~s~sK~~~--~~~g~~ 205 (338)
T cd06502 133 LENTTEGGTVY--PLDELKAISALAKENGLPLHLDGARLANAAAALG-V--ALKTYKSGVDSVSFCLSKGGG--APVGAV 205 (338)
T ss_pred EEeecCCcccc--CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcC-C--CHHHHHhcCCEEEEeccccCC--CccceE
Confidence 66555555543 67789999999999999999999874221 122 1 112222346766 5778886 23355
Q ss_pred cccCHHHHHhhcCCc--ccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEE
Q 013235 335 VVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (447)
Q Consensus 335 v~~~~~i~~~l~~~~--~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~g 412 (447)
+++++++++.+.... +.++++.+++.+++++++|+.-...+..++..++.+++.+.|+++ +. ......+.++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~ 280 (338)
T cd06502 206 VVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GG-LESEVQTNIVL 280 (338)
T ss_pred EECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CC-CcccccCCeEE
Confidence 457888888775422 234566677888888888763112234566777778888877765 21 11223455555
Q ss_pred EEEeeCCCCCCCCHHHHHHHHHHHH---hCCceeec
Q 013235 413 VEFVTDRQLKTPAKAETLYIMDKMK---GICALFFS 445 (447)
Q Consensus 413 iel~~~~~~~~p~~~~~~~~~~~l~---~~Gvlv~~ 445 (447)
+.+... .....++.+++. ++|+++..
T Consensus 281 v~~~~~-------~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 281 LDPVEA-------NAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred EecCCc-------cHHHHHHHHHHHHhhhCCEEEEe
Confidence 554211 122344555554 78988853
No 207
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.71 E-value=1.7e-15 Score=154.52 Aligned_cols=311 Identities=14% Similarity=0.095 Sum_probs=172.7
Q ss_pred eEEEecCCcccccCCCCC--HHHHHHHHHHHHhccccccccc-chHHHHHHHHHHHhCC------CCCceE--EEcCCHH
Q 013235 100 RYLDAFGGIATVCCGHCH--PYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKMP------GNLKVV--FFTNSGT 168 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~--p~v~~A~~~~l~~~~~~~~~~~-~~~~~elae~L~~~~~------~~~~~v--~~~~sGs 168 (447)
..|||..|....+-++.+ +.+.+++.+.++... ...|. .....+|.+.+++++. ...+++ +++++++
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~--~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~ 104 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETET--TKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGT 104 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhccccc--CCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCcc
Confidence 457888776422222223 577777776554321 11122 3344566666666541 134555 8999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHH
Q 013235 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (447)
Q Consensus 169 eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (447)
+|+..++++......++.|++.+++|.+....+... |...++.|......|+.| .+++++.+.
T Consensus 105 ~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~-------------g~~~v~v~~~~~~~~~~d----~~~l~~~~~ 167 (396)
T PRK09257 105 GALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAA-------------GLEVKTYPYYDAATKGLD----FDAMLADLS 167 (396)
T ss_pred HHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHc-------------CCcEEEEeccccccCccC----HHHHHHHHH
Confidence 999999875543346689999999998876555433 222233322101123344 566777665
Q ss_pred ccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcccc-CCCcccccc-cCCCCCEE---Eee
Q 013235 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART-GSHFWGFEA-HGVVPDIV---TMA 323 (447)
Q Consensus 249 ~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~-G~~~~~~~~-~gv~pDiv---t~s 323 (447)
...+ +..++++-..++++|.+. +.+.+++|.++|++||+++|.||+|.+|... +........ .+..+.++ +||
T Consensus 168 ~~~~-~~~~~i~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfS 245 (396)
T PRK09257 168 QAPA-GDVVLLHGCCHNPTGADL-TPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFS 245 (396)
T ss_pred hCCC-CCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcC
Confidence 4322 234555455677777765 8899999999999999999999999988643 111111111 11123343 699
Q ss_pred cccc-CCcccccccc---CHHH----HHhhcCCcccccCC-CChHHHHHHHHHHHHHh-h---hh----HHHHHHHHHHH
Q 013235 324 KGIG-NGIPLGAVVT---TPEI----AEVLTRRNYFNTFG-GNPVCTAAGHAVLKVIQ-K---DK----LQNNAHVVGSY 386 (447)
Q Consensus 324 K~lg-~G~pigav~~---~~~i----~~~l~~~~~~~T~~-~np~a~aaala~L~~i~-~---~~----l~~~~~~~g~~ 386 (447)
|.++ .|+++||+++ +++. +..+... ...++. .+++++.++.+.|+.-. . ++ +.+..+++.+.
T Consensus 246 K~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~ 324 (396)
T PRK09257 246 KNFGLYGERVGALSVVAEDAEEADRVLSQLKAT-IRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQL 324 (396)
T ss_pred CcCccccccceeEEEEeCCHHHHHHHHHHHHHH-hhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 4999999873 4443 2323221 112333 46676666666553210 0 11 22333333333
Q ss_pred HHHHHHHHHHhcCCee-eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 387 LKERLTALKDKYGIIG-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 387 l~~~L~~l~~~~~~i~-~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.+.|++.... ..+. ..+..|+++++++. ...+.+.+.+.||++.+
T Consensus 325 l~~~L~~~~~~-~~~~~~~p~gg~~~w~~l~------------~~~~~~l~~~~~V~~~p 371 (396)
T PRK09257 325 LVEALKAKGPS-RDFDFIARQRGMFSYSGLT------------PEQVDRLREEFGVYAVG 371 (396)
T ss_pred HHHHHHhcCCC-CCcccccccceEEEecCCC------------HHHHHHHHHcCCEEEcC
Confidence 33333332100 0111 23445888888762 12233344677998754
No 208
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=1.2e-15 Score=153.39 Aligned_cols=285 Identities=14% Similarity=0.117 Sum_probs=170.2
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ 177 (447)
+...+|+..|.. ++| .++.+ .+.. ...|+.+...+|.+.+++.++.+.++|+++++++|++..+++.
T Consensus 30 ~~~~~~l~~ne~--~~~-~~~~~------~~~~----~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 30 GRGDIWINANES--PFN-NEYKL------DLAR----LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRA 96 (354)
T ss_pred CCCcEEeeCCCC--CCC-CChhh------hhHH----hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHH
Confidence 345688887765 445 23332 1111 2346666678899999999887788999999999999999975
Q ss_pred HHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEE
Q 013235 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (447)
Q Consensus 178 ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aa 257 (447)
... .|.+.|++.+++|......+... |...+..|.. ..|..| .+.++. + + ++.+
T Consensus 97 ~~~-~g~d~vlv~~P~y~~y~~~~~~~-------------g~~v~~v~~~--~~~~~~----~~~l~~-~----~-~~~l 150 (354)
T PRK04635 97 FCE-PGQDSIACFGPTYGMYAISAETF-------------NVGVKALPLT--ADYQLP----LDYIEQ-L----D-GAKL 150 (354)
T ss_pred hcC-CCCCeEEEcCCChHHHHHHHHHc-------------CCEEEEEecC--CCCCCC----HHHHHh-c----c-CCCE
Confidence 432 23377999999996544332211 2333332221 123333 333432 2 1 3344
Q ss_pred EEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---Eeecccc-CCcccc
Q 013235 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLG 333 (447)
Q Consensus 258 vi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig 333 (447)
+++...++++|.+.+ .+.+++|.+.|+ ++++|+||+|..|.... ... +.....+.++ +|||.+| .|+|+|
T Consensus 151 i~i~nP~NPTG~~~~-~~~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~--~~~~~~~~~iv~~S~SK~~~l~GlRlG 224 (354)
T PRK04635 151 VFICNPNNPTGTVID-RADIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVA--DLLASYPNLVVLRTLSKAFALAGARCG 224 (354)
T ss_pred EEEeCCCCCCCccCC-HHHHHHHHHhCC--CcEEEEeCchHhhccCc-chH--HHHhhCCCEEEEechHHHhhhhHHHHh
Confidence 444445666777664 444555555443 59999999998875221 111 1112234444 6999998 899999
Q ss_pred ccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHHHhcCCeeeEeeccee
Q 013235 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410 (447)
Q Consensus 334 av~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~ 410 (447)
++++++++++.+... ...|+.+.....++.+.|+....+.+. +++++..+++.+.|+ +++.+.-.+..|.|
T Consensus 225 ~~i~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~~~g~f 298 (354)
T PRK04635 225 FTLANEELIEILMRV--IAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALS----MYGGAKVLEGNGNY 298 (354)
T ss_pred hhhCCHHHHHHHHhh--cCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH----hCCCceECCCCCcE
Confidence 999999999887642 234666777777777777421111122 223333344444444 33423334566888
Q ss_pred EEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 411 LGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 411 ~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+.+++. + ..++.+.|.++||+++
T Consensus 299 ~~~~~~--------~---~~~~~~~l~~~gv~v~ 321 (354)
T PRK04635 299 VLAKFD--------D---VDAVFKALWDAGIVAR 321 (354)
T ss_pred EEEECC--------C---HHHHHHHHHHCCEEEE
Confidence 888763 1 2467788899999986
No 209
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.69 E-value=2.5e-14 Score=144.56 Aligned_cols=294 Identities=15% Similarity=0.123 Sum_probs=178.0
Q ss_pred cCCCCCHHHHHHHHHHHHhcccccccc-------cchHHHHHHHHHHHhCCCC-CceEEEcCCHHHHHHHHHHHHHhh-c
Q 013235 112 CCGHCHPYVVDSIVNQIKRIQHSTVLY-------LNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLY-T 182 (447)
Q Consensus 112 ~lGh~~p~v~~A~~~~l~~~~~~~~~~-------~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~e~Aik~ar~~-t 182 (447)
..|-..+.+.+++.+.+.........+ ......++.+.|++++... .+++++++|+++++..+++..... .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~ 86 (373)
T cd06453 7 ATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANK 86 (373)
T ss_pred cccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCC
Confidence 345567899999988875542211111 1234567888999988655 568999999999999999765431 1
Q ss_pred CCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEcc
Q 013235 183 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES 262 (447)
Q Consensus 183 ~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Ep 262 (447)
++++|++.+.+|.+............ ...+..++... .+..| .+++++.+.. ++.+|++.-
T Consensus 87 ~g~~vl~~~~~~~~~~~~~~~~~~~~-------g~~~~~v~~~~----~~~~d----~~~l~~~l~~----~~~~v~~~~ 147 (373)
T cd06453 87 PGDEIVTSVMEHHSNIVPWQQLAERT-------GAKLKVVPVDD----DGQLD----LEALEKLLTE----RTKLVAVTH 147 (373)
T ss_pred CCCEEEECcchhHHHHHHHHHHHhhc-------CcEEEEeecCC----CCCcC----HHHHHHHhcC----CceEEEEeC
Confidence 45678877776654321111110000 01223333211 11123 5677776642 567777777
Q ss_pred ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHH
Q 013235 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPE 340 (447)
Q Consensus 263 i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~ 340 (447)
+.+++|.+.+ +++|.++|++||+++|+|++++ +|... +......+|+++++ |.+++ ..+|+++++++
T Consensus 148 ~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~~-----~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~ 216 (373)
T cd06453 148 VSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHMP-----VDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEE 216 (373)
T ss_pred cccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCcee-----eeccccCCCEEEeccccccCC-CCcEEEEEchH
Confidence 7777888876 8999999999999999999986 33221 12223457999988 99986 56899999999
Q ss_pred HHHhhcCCccc-----------c-------cC---CCChHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHH
Q 013235 341 IAEVLTRRNYF-----------N-------TF---GGNPVCTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKD 396 (447)
Q Consensus 341 i~~~l~~~~~~-----------~-------T~---~~np~a~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~ 396 (447)
+++.+...... . .| ..|..+..+..++|+.+++++ +.++.+++.+++++.|+++.
T Consensus 217 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~- 295 (373)
T cd06453 217 LLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP- 295 (373)
T ss_pred HhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 88776542100 0 11 123334444455677776544 44555566666666655531
Q ss_pred hcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 397 KYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 397 ~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+..+......+.++.+.+... ...++.+.|.++||.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~l~~~gi~i~~ 335 (373)
T cd06453 296 GVRVYGDAEDRAGVVSFNLEGI---------HPHDVATILDQYGIAVRA 335 (373)
T ss_pred CeEEeCCccccCCeEEEEECCc---------CHHHHHHHHHHCCEEecc
Confidence 1112222233466777766211 135788899999998864
No 210
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.69 E-value=8.1e-15 Score=152.40 Aligned_cols=278 Identities=16% Similarity=0.115 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHhCC--------CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccc
Q 013235 142 AIADFAEALASKMP--------GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (447)
Q Consensus 142 ~~~elae~L~~~~~--------~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~ 213 (447)
...+|.+.|++++. .+.++|+++++++++++.++.... ..++.|++.+++|.+........
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~--~pGd~Vlv~~P~Y~~~~~~~~~~--------- 155 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA--EPGDAFLLPTPYYPGFDRDLKWR--------- 155 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC--CCCCEEEECCCCCCchHHHHhhc---------
Confidence 33455555555442 356789999999999998887543 25688999999997764433211
Q ss_pred ccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCCeE-EEEEccccCCCceeeCCCChHHHHHHHHHHhCCE
Q 013235 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVA-GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290 (447)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a-avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~l 290 (447)
.|+..++.|......|..| .+++++.+... ...++. .+|+.|. +++|.+ .+++.+++|.++|++||++
T Consensus 156 ---~g~~~v~v~~~~~~~~~~~----~~~le~~~~~~~~~~~~~k~v~l~nP~-NPTG~~-~s~e~l~~ll~~a~~~~~~ 226 (468)
T PLN02450 156 ---TGVEIVPIHCSSSNGFQIT----ESALEEAYQQAQKLNLKVKGVLITNPS-NPLGTT-TTRTELNLLVDFITAKNIH 226 (468)
T ss_pred ---CCcEEEEEecCCccCCcCC----HHHHHHHHHHHHhcCCCeeEEEEecCC-CCCCcc-cCHHHHHHHHHHHHHCCcE
Confidence 1333344332212233334 34555554321 112444 5555564 566655 4788999999999999999
Q ss_pred EEEeccccCccccCCCcccc-ccc------C--CCCCEE---Eeecccc-CCccccccccCHH-HHHhhcCCcccccCCC
Q 013235 291 CIADEVQAGFARTGSHFWGF-EAH------G--VVPDIV---TMAKGIG-NGIPLGAVVTTPE-IAEVLTRRNYFNTFGG 356 (447)
Q Consensus 291 lI~DEv~tGfgr~G~~~~~~-~~~------g--v~pDiv---t~sK~lg-~G~pigav~~~~~-i~~~l~~~~~~~T~~~ 356 (447)
+|.||+|.++-..+..+-.. +.. + ....++ +|||.++ +|+++|+++++++ +.+.+..... ....
T Consensus 227 iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~--~~~~ 304 (468)
T PLN02450 227 LISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS--FGLV 304 (468)
T ss_pred EEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhh--cCCC
Confidence 99999999865544222111 111 1 112233 6999998 8999999999754 5555543211 1234
Q ss_pred ChHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHH---HHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHH
Q 013235 357 NPVCTAAGHAVLKVIQKDKLQN-NAHVVGSYLK---ERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYI 432 (447)
Q Consensus 357 np~a~aaala~L~~i~~~~l~~-~~~~~g~~l~---~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~ 432 (447)
+.+++.++.+.|+ ++.+.+ .++++.+.++ +.+.+..+++++.......|+++++.+.+.-. ...-....++
T Consensus 305 s~~~Q~a~~~~L~---~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~--~~~~~~~~~l 379 (468)
T PLN02450 305 SSQTQYLLSALLS---DKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLK--SNTFEAEMEL 379 (468)
T ss_pred CHHHHHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcC--cCCchHHHHH
Confidence 6777777766664 332221 1222222222 22333333343321223457899998842110 0111123457
Q ss_pred HHHHH-hCCceeecc
Q 013235 433 MDKMK-GICALFFSQ 446 (447)
Q Consensus 433 ~~~l~-~~Gvlv~~~ 446 (447)
++.|+ +.||.+.++
T Consensus 380 ~~~ll~~~gV~v~PG 394 (468)
T PLN02450 380 WKKIVYEVKLNISPG 394 (468)
T ss_pred HHHHHHhCCEEEeCc
Confidence 77776 479998753
No 211
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.69 E-value=3.1e-15 Score=153.58 Aligned_cols=311 Identities=15% Similarity=0.057 Sum_probs=172.9
Q ss_pred eEEEecCCcccccCCCCC--HHHHHHHHHHHHhccc--ccccccch-HHHHHHHHHHHhC------CCCCceEEEcCCHH
Q 013235 100 RYLDAFGGIATVCCGHCH--PYVVDSIVNQIKRIQH--STVLYLNH-AIADFAEALASKM------PGNLKVVFFTNSGT 168 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~--p~v~~A~~~~l~~~~~--~~~~~~~~-~~~elae~L~~~~------~~~~~~v~~~~sGs 168 (447)
..|||..|... + ... +.+.+++.+.++.... ....|..+ ...+|.+.|++++ +.+.++|+++++++
T Consensus 31 ~~i~l~~g~p~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPA--H-IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCC--c-cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 45888766542 1 121 2455666555443110 01124322 2345555555543 34567899999999
Q ss_pred HHHHHHHHHHHhh---cCCCeEEE-EcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHH
Q 013235 169 EANELAIMMARLY---TGCNDIIS-LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQ 244 (447)
Q Consensus 169 eA~e~Aik~ar~~---t~~~~ii~-~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le 244 (447)
+|+..++++.... ..++.|++ .+++|.+....+........ .+...++.+.. ...|+.| .++++
T Consensus 108 ~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~d----~~~l~ 175 (416)
T PRK09440 108 SAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVS-------YRPNIELLPEG-QFKYHVD----FEHLH 175 (416)
T ss_pred HHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceee-------ccccccccccc-ccccCCC----HHHcc
Confidence 9999998755321 12467888 69999987654332110000 01111111110 0012333 34444
Q ss_pred HHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE---E
Q 013235 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---T 321 (447)
Q Consensus 245 ~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv---t 321 (447)
+. .+..+.++..| ++++|.+. +.+.+++|.++|++|++++|+||+|..+-..- .+..... ...+.++ +
T Consensus 176 --~~---~~~~~i~l~~P-~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~~S 246 (416)
T PRK09440 176 --ID---EDTGAICVSRP-TNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILCMS 246 (416)
T ss_pred --cC---CCceEEEEecC-CCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEEec
Confidence 11 22334445555 56777775 78889999999999999999999996331110 0101100 1123333 6
Q ss_pred eeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhhhhHHHHH--------HHHHHHHHHHHHH
Q 013235 322 MAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNA--------HVVGSYLKERLTA 393 (447)
Q Consensus 322 ~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~--------~~~g~~l~~~L~~ 393 (447)
|||....|+++||+++++++++.+........++.+.+++.++.+.|+ +.++.++. +++.+.+++.|.+
T Consensus 247 fSK~~~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~r~~~~~~~L~~ 323 (416)
T PRK09440 247 LSKLGLPGVRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIE---SGDLLRLSETVIRPFYRQKVQLAIALLRR 323 (416)
T ss_pred ccccCCCcceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999755799999999999999887653333445667888888877774 33333332 2233333333333
Q ss_pred HHHhcCCeeeEee-cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 394 LKDKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 394 l~~~~~~i~~vrg-~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.....+ +.-++. .|+++++++.... ....++.+.|.++||++.+
T Consensus 324 ~l~~~~-~~~~~p~gg~fiw~~~~~~~-------~~~~~~~~~l~~~gV~v~p 368 (416)
T PRK09440 324 YLPDEP-CLIHKPEGAIFLWLWFKDLP-------ITTEELYQRLKARGVLVVP 368 (416)
T ss_pred hcccCC-eEEecCCCceEEEEECCCCC-------CCHHHHHHHHHHCCEEEec
Confidence 222111 222233 4899999884311 0135677888999999875
No 212
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.69 E-value=2.2e-14 Score=146.32 Aligned_cols=299 Identities=15% Similarity=0.103 Sum_probs=179.3
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc---cccc----ccchHHHHHHHHHHHhCCCC-CceEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH---STVL----YLNHAIADFAEALASKMPGN-LKVVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~---~~~~----~~~~~~~elae~L~~~~~~~-~~~v~~~~sGse 169 (447)
+..|||..+ .|-.++.|.+++.+.+..... .... .......++++.|++++... .++|+|++|+++
T Consensus 16 ~~iyld~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAA------TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 467888653 344578899999887754211 1110 11234567889999998763 578999999999
Q ss_pred HHHHHHHHHH--hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 170 ANELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 170 A~e~Aik~ar--~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
++..++.... ...++++|++.++.|++......... ...|+..+..|... .+..| .+++++.+
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~---------~~~g~~v~~v~~~~--~~~~~----~~~l~~~i 154 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVA---------QQTGAKVVKLPIGA--DLLPD----IRQLPELL 154 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHH---------HHcCcEEEEEecCC--CCCcC----HHHHHHHh
Confidence 9999987542 12356789998988886432111110 01133322222211 11123 56677766
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--cc
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~ 325 (447)
.. ++.+|++.-+++.+|.+.+ +++|.++|+++|+++|+|++|. +|.. . .+.....+|+.++| |.
T Consensus 155 ~~----~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~--~---~~~~~~~~d~~~~s~~K~ 220 (398)
T TIGR03392 155 TP----RTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG--P---PDVQALDIDFYAFSGHKL 220 (398)
T ss_pred cc----CceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC--C---CChhhcCCCEEEEecccc
Confidence 42 4566777777888888876 8999999999999999999995 3321 1 12222347999988 97
Q ss_pred ccCCccccccccCHHHHHhhcCCccc------------------ccC---CCChHHHHHHHHHHHHHhhhh---HHHHHH
Q 013235 326 IGNGIPLGAVVTTPEIAEVLTRRNYF------------------NTF---GGNPVCTAAGHAVLKVIQKDK---LQNNAH 381 (447)
Q Consensus 326 lg~G~pigav~~~~~i~~~l~~~~~~------------------~T~---~~np~a~aaala~L~~i~~~~---l~~~~~ 381 (447)
+|. ..+|+++.++++++.+...... .-| .-|..+.++..++|+.+++.+ ..++.+
T Consensus 221 ~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~ 299 (398)
T TIGR03392 221 YGP-TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSV 299 (398)
T ss_pred cCC-CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 653 2379999999988766431100 001 123446666667777775543 344455
Q ss_pred HHHHHHHHHHHHHHHhcCCeeeEe-ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 382 VVGSYLKERLTALKDKYGIIGDVR-GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 382 ~~g~~l~~~L~~l~~~~~~i~~vr-g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.+++++.|.++ +.+.-.. ....++.+.+.. . ....+.+.|.++||.++.
T Consensus 300 ~l~~~l~~~l~~l----~g~~~~~~~~~~i~~~~~~~------~---~~~~l~~~L~~~gI~v~~ 351 (398)
T TIGR03392 300 SLADLAEERLAQL----PGFRSFRCPGSSLLAFDFAG------V---HHSDLAALLAESGIALRA 351 (398)
T ss_pred HHHHHHHHHHhcC----CCeEEeCCCCCcEEEEEeCC------c---CHHHHHHHHHhCCEEEec
Confidence 5555555555443 2221111 123355555421 0 134677888899999864
No 213
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.69 E-value=3.8e-15 Score=150.06 Aligned_cols=298 Identities=13% Similarity=0.087 Sum_probs=167.5
Q ss_pred CCCCHHHHHHHHHHHHhcccccc------cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeE
Q 013235 114 GHCHPYVVDSIVNQIKRIQHSTV------LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDI 187 (447)
Q Consensus 114 Gh~~p~v~~A~~~~l~~~~~~~~------~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~i 187 (447)
|+..|.+.+++.+.......++. ...++...++.+++++.++. +.+++++|+++++..++.... .+++.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~--~~gd~V 86 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC--EKGDWV 86 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc--CCCCEE
Confidence 66788888888776533222111 12246788999999999864 789999999999999997543 345677
Q ss_pred EEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCCeEEEEEcccc
Q 013235 188 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGHVAGFLSESIQ 264 (447)
Q Consensus 188 i~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~~aavi~Epi~ 264 (447)
++...+|.+... +... .|+..+..|....+.|..| .+++++.+.... ..++.++++...+
T Consensus 87 l~~~~~~~~~~~-~~~~------------~g~~~~~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lv~l~~p~ 149 (361)
T cd06452 87 VVDGLAHYTSYV-AAER------------AGLNVREVPNTGHPEYHIT----PEGYAEVIEEVKDEFGKPPALALLTHVD 149 (361)
T ss_pred EEcCCcchHHHH-HHHh------------cCCEEEEEecCCCCCcccC----HHHHHHHHHHHhhccCCCceEEEEECCC
Confidence 777666654332 1111 1222222222111123344 455665554211 1245666666666
Q ss_pred CCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE--EeeccccCCccccccccCHHHH
Q 013235 265 GVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPEIA 342 (447)
Q Consensus 265 ~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pigav~~~~~i~ 342 (447)
++.|...+ +++|.++|+++|+++|+||+|. +|... +....++. |++ +++|.++++.++|+++++++++
T Consensus 150 n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~~---~~~~~~~~--d~~~~s~~K~l~~~~~~G~l~~~~~~~ 219 (361)
T cd06452 150 GNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRMP---VSGKELGA--DFIVGSGHKSMAASAPIGVLATTEEWA 219 (361)
T ss_pred CCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCcC---CCHHHcCC--CEEEecCCccccCCCCeEEEEECHHHH
Confidence 77787655 8999999999999999999996 43221 22233343 655 5779998777999999999998
Q ss_pred HhhcCCccc------ccCCCC--hHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEE
Q 013235 343 EVLTRRNYF------NTFGGN--PVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (447)
Q Consensus 343 ~~l~~~~~~------~T~~~n--p~a~aaala~L~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~gi 413 (447)
+.+...... ..++++ +...+++.++++.+.+. +...+..+..+++.+.|+++. .+..+....+...++.+
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~-g~~v~~~~~~~~n~~~~ 298 (361)
T cd06452 220 DIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIE-GIKQLGEKPKNHDLMFF 298 (361)
T ss_pred HHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEECCCCCCCceEEE
Confidence 887542210 112222 22344455566544221 112222233456666665541 11111111233445545
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
+...-............++.+.|+++||++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~ 328 (361)
T cd06452 299 ETPSFDEIAKKHKRRGYFLYSELKKRGIHG 328 (361)
T ss_pred EcCCcchhhhhccccchhHHHHHHHcCceE
Confidence 432000000000011236889999999985
No 214
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.68 E-value=1.5e-14 Score=144.71 Aligned_cols=287 Identities=14% Similarity=0.109 Sum_probs=176.6
Q ss_pred CCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCc--eEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK--VVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~--~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~ 193 (447)
..|.|.+++.+ ...|-...| .+...++.++|++.+..+.+ .+++++||+++++.++.... .+++++++..++
T Consensus 10 ~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--~~~~~vi~~~~~ 83 (355)
T TIGR03301 10 TSATVRDAMLV---DWCHWDSEF-NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--PRDGKLLVLING 83 (355)
T ss_pred CCHHHHHHhhh---hccCCCHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--CCCCeEEEECCC
Confidence 45777777665 222322223 36678899999998865433 57789999999999997653 245677888887
Q ss_pred cccCchhhhh-ccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeC
Q 013235 194 YHGNAAGTMG-ATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (447)
Q Consensus 194 yHG~~~~~~~-~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~ 272 (447)
+++....... ..+. .+..++.++. +..| .+++++.+... + ++..+++-..++.+|.+.+
T Consensus 84 ~~~~~~~~~a~~~g~----------~~~~i~~~~~----~~~d----~~~l~~~l~~~-~-~~~~v~~~~~~~~~G~~~~ 143 (355)
T TIGR03301 84 AYGERLAKICEYLGI----------PHTDLNFSEY----EPPD----LNRIEEALAAD-P-DITHVATVHHETTTGILNP 143 (355)
T ss_pred chhhHHHHHHHHcCC----------ceEEEecCCC----CCCC----HHHHHHHHHhC-C-CceEEEEEecCCcccchhH
Confidence 7765322111 1110 1222222111 1234 56777777542 2 4444443334556777776
Q ss_pred CCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE--EeeccccCCccccccccCHHHHHhhcCCc-
Q 013235 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRN- 349 (447)
Q Consensus 273 ~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pigav~~~~~i~~~l~~~~- 349 (447)
+++|.++|++||+++|+|++++ ||.. .+.+..++ .|++ +++|.++++..+|++++++++++.+....
T Consensus 144 ----~~~i~~l~~~~~~~livD~~~s-~g~~---~~~~~~~~--~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~ 213 (355)
T TIGR03301 144 ----LEAIAKVARSHGAVLIVDAMSS-FGAI---PIDIEELD--VDALIASANKCLEGVPGFGFVIARRDLLEASAGNAR 213 (355)
T ss_pred ----HHHHHHHHHHcCCEEEEEeccc-cCCc---ccchhhcC--ccEEEecCCcccccCCceeEEEECHHHHHHhhCCCC
Confidence 8999999999999999999886 5422 22233334 4655 57899876545799999999988765210
Q ss_pred ----------------ccccCCCChHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHHHhcCCeee-Eeecc
Q 013235 350 ----------------YFNTFGGNPVCTAAGHAVLKVIQKDK----LQNNAHVVGSYLKERLTALKDKYGIIGD-VRGRG 408 (447)
Q Consensus 350 ----------------~~~T~~~np~a~aaala~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~~~i~~-vrg~G 408 (447)
....|..|+.++.++.++|+.+.+++ ..++.++..+++++.|+++ .+..+.. .+..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~--g~~~~~~~~~~~~ 291 (355)
T TIGR03301 214 SLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL--GFQPLLPERWQSP 291 (355)
T ss_pred CceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc--CCeeecCCCCCCC
Confidence 01234567777788788888875543 4455666777777777654 2222211 12345
Q ss_pred eeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 409 l~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
.++.+.+.... .....++.+.|.++||++.+.
T Consensus 292 ~~~~~~~~~~~------~~~~~~~~~~l~~~gi~i~~~ 323 (355)
T TIGR03301 292 IIVSFLYPDDP------DFDFDDFYQELKERGFVIYPG 323 (355)
T ss_pred cEEEEECCCCC------cchHHHHHHHHHHCCEEEECC
Confidence 66667663211 012357889999999998653
No 215
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.68 E-value=2.6e-14 Score=145.67 Aligned_cols=298 Identities=15% Similarity=0.123 Sum_probs=175.2
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc-cccccc-----chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYL-----NHAIADFAEALASKMPGNLKVVFFTNSGTEANE 172 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~-----~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e 172 (447)
..|||..+ .|-.++.+.+++.+.+..... ....|. .+...++.+.++++++...+.|++++++++++.
T Consensus 18 ~~yl~~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPA------GTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCc------cCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 47888643 234678999999988865321 111122 234578999999998765557999999999988
Q ss_pred HHHHHHHh-hcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 173 LAIMMARL-YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 173 ~Aik~ar~-~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
.++..... ..++++|++.++.|++.......... ..|+.....+.... .+..| .+++++.+.
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~~~~~~~~~~-~~~~~----~~~l~~~i~--- 154 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAE---------RAGAKVKWARVDEA-TGELH----PDDLASLLS--- 154 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHH---------hcCCEEEEEecccc-CCCcC----HHHHHHhcC---
Confidence 77765422 33557888887777654321111100 01222221111110 01123 566776664
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccCC
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNG 329 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G 329 (447)
+ ++.+|+++-+++++|.+.+ +++|.++|++||+++|+||+|. +| .+ ..... ...+|+++ +.|.+ |
T Consensus 155 ~-~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~-~~--~~~~~--~~~~d~~~~s~~K~~--g 221 (397)
T TIGR01976 155 P-RTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-AP-HG--LIDVQ--ATGADFLTCSAYKFF--G 221 (397)
T ss_pred C-CceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-cc-cc--CCCHH--HcCCCEEEEechhhc--C
Confidence 2 4567777777788888876 9999999999999999999985 32 11 11122 23468775 56877 4
Q ss_pred ccccccccCHHHHHhhcCCcccccC----------CCChHHHHHHHHHHHHHhhhh-----------------HHHHHHH
Q 013235 330 IPLGAVVTTPEIAEVLTRRNYFNTF----------GGNPVCTAAGHAVLKVIQKDK-----------------LQNNAHV 382 (447)
Q Consensus 330 ~pigav~~~~~i~~~l~~~~~~~T~----------~~np~a~aaala~L~~i~~~~-----------------l~~~~~~ 382 (447)
.++|++++++++++.+........+ ..|....++..++|+.+++.+ ..++..+
T Consensus 222 ~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (397)
T TIGR01976 222 PHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENR 301 (397)
T ss_pred CceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHH
Confidence 5789999999988777542111111 123344455556676664322 2334444
Q ss_pred HHHHHHHHHHHHHHhcCCeeeEe-----ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 383 VGSYLKERLTALKDKYGIIGDVR-----GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 383 ~g~~l~~~L~~l~~~~~~i~~vr-----g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.++++++|+++ +.+.-+. ..+.++.+.+... ...++.+.|.++||+++.
T Consensus 302 l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~ 356 (397)
T TIGR01976 302 LAEYLLVGLSDL----PGVTLYGVARLAARVPTVSFTVHGL---------PPQRVVRRLADQGIDAWA 356 (397)
T ss_pred HHHHHHHHHhcC----CCEEEeCCCCccCCCceEEEEeCCc---------CHHHHHHHHHHCCeEEEe
Confidence 555555555443 2121111 1344555554211 135688899999999874
No 216
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.68 E-value=2.7e-15 Score=146.50 Aligned_cols=278 Identities=16% Similarity=0.115 Sum_probs=171.1
Q ss_pred CHHHHHHHHHHHHhc---ccccccccchHHHHHHHHHHHhCC---CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEE
Q 013235 117 HPYVVDSIVNQIKRI---QHSTVLYLNHAIADFAEALASKMP---GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL 190 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~---~~~~~~~~~~~~~elae~L~~~~~---~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~ 190 (447)
+.-|.+|+++.+... +++...+.......|++++++.++ ...++|++++++.||+..++.... ..++.||++
T Consensus 46 P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~--~~GDeVii~ 123 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL--NPGDEVIVF 123 (420)
T ss_pred cHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc--CCCCEEEEe
Confidence 345666666666543 111222233444556666666443 235679999999999998886443 378999999
Q ss_pred cCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCcee
Q 013235 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGII 270 (447)
Q Consensus 191 ~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~ 270 (447)
++.|-.+.......++.+.+--..+..|- .+-..|..| .+++|..+.. +.-+.||+.|.+ +.|-+
T Consensus 124 eP~fd~Y~~~~~maG~tpv~v~~~~~~g~-------~~s~~~~~D----~~~le~~~t~---kTk~Ii~ntPhN-PtGkv 188 (420)
T KOG0257|consen 124 EPFFDCYIPQVVMAGGTPVFVPLKPKEGN-------VSSSDWTLD----PEELESKITE---KTKAIILNTPHN-PTGKV 188 (420)
T ss_pred cCcchhhhhHHhhcCCcceeecccccccc-------ccCccccCC----hHHHHhhccC---CccEEEEeCCCC-CcCcc
Confidence 99999888877766554322111111111 122234455 5677777753 233445555554 45554
Q ss_pred eCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc----cCCCCCEEEeecccc-CCccccccccCHHHHHhh
Q 013235 271 ELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA----HGVVPDIVTMAKGIG-NGIPLGAVVTTPEIAEVL 345 (447)
Q Consensus 271 ~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~----~gv~pDivt~sK~lg-~G~pigav~~~~~i~~~l 345 (447)
.+.+.|++|.++|++||+++|.||||.-+-..|.++-.+.. +..+..+-.+||.+| .|+++||+++++.++..+
T Consensus 189 -fsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~ 267 (420)
T KOG0257|consen 189 -FSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSAL 267 (420)
T ss_pred -cCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhH
Confidence 48899999999999999999999999887777742222211 222334446899999 699999999988888777
Q ss_pred cCCcccccCCCChHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEE
Q 013235 346 TRRNYFNTFGGNPVCTAAGHAVLKVIQ----------KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415 (447)
Q Consensus 346 ~~~~~~~T~~~np~a~aaala~L~~i~----------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel 415 (447)
........|.-+.....|..+++..-+ ..++....++..+.|.+.|.++ .++. ...-.+.++++++
T Consensus 268 ~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l--g~~v--~~p~gayyl~adf 343 (420)
T KOG0257|consen 268 FPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL--GLKV--TGPEGAYYLWADF 343 (420)
T ss_pred HHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc--CCcc--ccCCCceEEEEec
Confidence 654434455554444444444443211 1124555666667777777666 3322 2233456777887
Q ss_pred e
Q 013235 416 V 416 (447)
Q Consensus 416 ~ 416 (447)
.
T Consensus 344 s 344 (420)
T KOG0257|consen 344 S 344 (420)
T ss_pred c
Confidence 6
No 217
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.67 E-value=4.3e-14 Score=144.35 Aligned_cols=297 Identities=15% Similarity=0.095 Sum_probs=180.5
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc---cc----cccchHHHHHHHHHHHhCCC-CCceEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS---TV----LYLNHAIADFAEALASKMPG-NLKVVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~---~~----~~~~~~~~elae~L~~~~~~-~~~~v~~~~sGse 169 (447)
+..|||-.+ .|-.++.|.+++.+.+...... .. ........+++++|+++++. +.+.|+|++|+++
T Consensus 19 ~~~yld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAA------TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCc------ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 457888643 2345688999998877643111 00 11234567888999999986 5678999999999
Q ss_pred HHHHHHHHHH--hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe--EeecCCCCcCCCCCCChHHHHHHHHH
Q 013235 170 ANELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV--HHALNPDPYRGVFGADGEMYAKDVQD 245 (447)
Q Consensus 170 A~e~Aik~ar--~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~--~~~~~p~~~~~~~~~d~~~~~~~le~ 245 (447)
++..+++... ...++++|++.++.|++.......... ..|+ ..++.+. .+..| .+++++
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~----~~~~d----~~~l~~ 155 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQ---------QTGAKVVKLPLGA----DRLPD----VDLLPE 155 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHH---------HhCCEEEEEecCC----CCcCC----HHHHHH
Confidence 9999987652 124568899999988763221111100 0122 2333211 11123 566777
Q ss_pred HHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--
Q 013235 246 LIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA-- 323 (447)
Q Consensus 246 ~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s-- 323 (447)
.+. + ++.+|++..+++.+|.+.+ +++|.++|+++|+++|+|++|. +|..- .+.....+|++++|
T Consensus 156 ~i~---~-~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~~-----~~~~~~~~d~~~~s~~ 221 (401)
T PRK10874 156 LIT---P-RTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHFP-----ADVQALDIDFYAFSGH 221 (401)
T ss_pred hcC---c-CcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-ccccc-----CCchhcCCCEEEEecc
Confidence 664 2 4566777777788888876 8999999999999999999995 33221 12222347988776
Q ss_pred ccccCCccccccccCHHHHHhhcCCccc------------------ccC---CCChHHHHHHHHHHHHHhhhh---HHHH
Q 013235 324 KGIGNGIPLGAVVTTPEIAEVLTRRNYF------------------NTF---GGNPVCTAAGHAVLKVIQKDK---LQNN 379 (447)
Q Consensus 324 K~lg~G~pigav~~~~~i~~~l~~~~~~------------------~T~---~~np~a~aaala~L~~i~~~~---l~~~ 379 (447)
|.+|. ..+|+++.++++++.+...... .-| ..|..+.++..++|+.+++.+ ..++
T Consensus 222 K~~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~ 300 (401)
T PRK10874 222 KLYGP-TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESW 300 (401)
T ss_pred cccCC-CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 96652 1258888999988766421100 001 224446666667777765443 3455
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeeEe-ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 380 AHVVGSYLKERLTALKDKYGIIGDVR-GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 380 ~~~~g~~l~~~L~~l~~~~~~i~~vr-g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+++.++++++|+++ +.+..++ ..+.++.+.+..- ...++.+.|.++||.+++
T Consensus 301 ~~~l~~~l~~~l~~~----~g~~~~~~~~~~i~~~~~~~~---------~~~~~~~~L~~~gI~v~~ 354 (401)
T PRK10874 301 SRSLATLAEDALAKL----PGFRSFRCQDSSLLAFDFAGV---------HHSDLVTLLAEYGIALRA 354 (401)
T ss_pred HHHHHHHHHHHHhcC----CCEEEeCCCCCcEEEEEECCc---------CHHHHHHHHHHCCcEEec
Confidence 555566666655543 2222221 2234555554210 134677888899999865
No 218
>PLN02231 alanine transaminase
Probab=99.67 E-value=1.5e-14 Score=152.10 Aligned_cols=231 Identities=16% Similarity=0.162 Sum_probs=143.8
Q ss_pred CHHHHHHHHHHHHhc-cccccccc-chHHHHHHHHHHHhC------CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEE
Q 013235 117 HPYVVDSIVNQIKRI-QHSTVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSGTEANELAIMMARLYTGCNDII 188 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~-~~~~~~~~-~~~~~elae~L~~~~------~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii 188 (447)
+.++++++.+.+... ......|. .....+|++.+++++ +...++|++++++++|+..++++... ..++.|+
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-~~gd~Vl 220 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEKDGIL 220 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-CCCCEEE
Confidence 346666666666542 11122232 334455555555543 34467899999999999999986532 2468899
Q ss_pred EEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCC--CCe-EEEEEccccC
Q 013235 189 SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS--GHV-AGFLSESIQG 265 (447)
Q Consensus 189 ~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~--~~~-aavi~Epi~~ 265 (447)
+..++|.+........ |...+++|......|+.| .++|++.++.... .++ +.+++.| ++
T Consensus 221 i~~P~Y~~y~~~~~~~-------------g~~~v~~~l~~~~~~~~d----~~~Le~~l~~~~~~~~~~k~ivl~nP-~N 282 (534)
T PLN02231 221 CPIPQYPLYSASIALH-------------GGTLVPYYLDEATGWGLE----ISELKKQLEDARSKGITVRALVVINP-GN 282 (534)
T ss_pred EeCCCChhHHHHHHHc-------------CCEEEEEecCcccCCCCC----HHHHHHHHHHHhhcCCCeEEEEEeCC-CC
Confidence 9999998776544332 223333333222345556 5666666653211 134 4566667 55
Q ss_pred CCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcccc-CCCccccccc----CC---CCCEE---Eeecccc--CCccc
Q 013235 266 VGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART-GSHFWGFEAH----GV---VPDIV---TMAKGIG--NGIPL 332 (447)
Q Consensus 266 ~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~-G~~~~~~~~~----gv---~pDiv---t~sK~lg--~G~pi 332 (447)
++|.+. +++.+++|.++|++||++||.||+|..+... +..+..+... |. .+.++ +|||++. .|+|+
T Consensus 283 PTG~vl-s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRi 361 (534)
T PLN02231 283 PTGQVL-AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRG 361 (534)
T ss_pred CCCcCC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccce
Confidence 667654 7899999999999999999999999988653 3222222111 11 12245 5899984 59999
Q ss_pred ccccc---CHHHHHhhcCCcccccCCCChHHHHHHHHHH
Q 013235 333 GAVVT---TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 333 gav~~---~~~i~~~l~~~~~~~T~~~np~a~aaala~L 368 (447)
||+++ ++++++.+.... ..+.+.+.++++++...+
T Consensus 362 Gy~~~~~~~~~l~~~l~k~~-~~~~~s~~~~Q~~~~~~l 399 (534)
T PLN02231 362 GYMEVTGFTSDVREQIYKVA-SVNLCSNISGQILASLVM 399 (534)
T ss_pred EEEEEecCCHHHHHHHHHHH-hhhcCCChHHHHHHHHHh
Confidence 99976 688888775432 233455666677666666
No 219
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.67 E-value=4.1e-15 Score=150.23 Aligned_cols=240 Identities=16% Similarity=0.087 Sum_probs=158.7
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +.+++++||++|+..+++... .+++.|++....|++......... .
T Consensus 35 ~r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~--~~gd~Vl~~~~~y~~~~~~~~~~~---------~ 101 (369)
T cd00614 35 SRIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALL--KAGDHVVASDDLYGGTYRLFERLL---------P 101 (369)
T ss_pred ECCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHc--CCCCEEEECCCCcchHHHHHHHHH---------h
Confidence 455688899999999998853 567788999999999998653 356778888888876542211110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. +| .+++++.+. .++.+|++|.++++.|.+.+ +++|.++|+++|+++|+||
T Consensus 102 ~~g~~~~~v~~-------~d----~~~l~~~i~----~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~ 162 (369)
T cd00614 102 KLGIEVTFVDP-------DD----PEALEAAIK----PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDN 162 (369)
T ss_pred hcCeEEEEeCC-------CC----HHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 11332222111 12 456766664 25778999999999998887 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEE--EeeccccC-C-ccccccccCH-HHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTTP-EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pigav~~~~-~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
++... .. .......+|++ +++|.++| | .+.|++++++ ++++.+...........+|..+++++..|+.
T Consensus 163 t~~~~-~~------~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 163 TFATP-YL------QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred CCcch-hc------CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC
Confidence 98522 11 11123346888 58899986 4 7889999987 8877776432223445678888877777754
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHH----hcCCee----------eEeecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKD----KYGIIG----------DVRGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i~----------~vrg~Gl~~giel~ 416 (447)
+. ...++..++.+++.+.|++... .|+.+. ...|.|.|+.|++.
T Consensus 236 l~--~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 236 LP--LRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred HH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 32 2345556666677666665321 022110 12467999999984
No 220
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.66 E-value=8.6e-14 Score=142.42 Aligned_cols=299 Identities=12% Similarity=0.062 Sum_probs=182.3
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc-c-cccc-----cchHHHHHHHHHHHhCCC-CCceEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-S-TVLY-----LNHAIADFAEALASKMPG-NLKVVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~-~-~~~~-----~~~~~~elae~L~~~~~~-~~~~v~~~~sGse 169 (447)
+..|||..+. |..++.|.+++.+.+..... . ...+ ......+++++|++.+.. +.++|+|++|++|
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4579997542 34678999999887765321 1 1111 134466888899999875 4578999999999
Q ss_pred HHHHHHHHHH--hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe--EeecCCCCcCCCCCCChHHHHHHHHH
Q 013235 170 ANELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV--HHALNPDPYRGVFGADGEMYAKDVQD 245 (447)
Q Consensus 170 A~e~Aik~ar--~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~--~~~~~p~~~~~~~~~d~~~~~~~le~ 245 (447)
++..+++... ...++++|++.+..||.......... ...|+ ..++.+. .+..| .+++++
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~---------~~~g~~v~~v~~~~----~~~~d----~~~l~~ 159 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLC---------ARVGAELRVIPLNP----DGTLQ----LETLPA 159 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHH---------HHcCcEEEEEecCC----CCCCC----HHHHHH
Confidence 9998887532 23355788888887776432211110 01122 2333211 11123 566776
Q ss_pred HHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--
Q 013235 246 LIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA-- 323 (447)
Q Consensus 246 ~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s-- 323 (447)
.+. + ++.+|++..+++++|.+.+ +++|.++|+++|+++|+|++|. +|..- ...+ ...+|++++|
T Consensus 160 ~i~---~-~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~~---~~~~--~~~~D~~~~s~~ 225 (406)
T PRK09295 160 LFD---E-RTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHHP---VDVQ--ALDCDFYVFSGH 225 (406)
T ss_pred hcC---C-CcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCccc---cCch--hcCCCEEEeehh
Confidence 664 2 4567777778888899887 9999999999999999999995 44321 1122 2346998876
Q ss_pred ccccCCccccccccCHHHHHhhcCCcc----------------------cccCCCChHHHHHHHHHHHHHhhh---hHHH
Q 013235 324 KGIGNGIPLGAVVTTPEIAEVLTRRNY----------------------FNTFGGNPVCTAAGHAVLKVIQKD---KLQN 378 (447)
Q Consensus 324 K~lg~G~pigav~~~~~i~~~l~~~~~----------------------~~T~~~np~a~aaala~L~~i~~~---~l~~ 378 (447)
|.+|. -.+|+++.++++++.+..... +.+-.-|..+.++..++|+.+.+. ...+
T Consensus 226 K~~gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 304 (406)
T PRK09295 226 KLYGP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAE 304 (406)
T ss_pred hccCC-CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 96552 236889999988776542100 011134566777777888887653 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 379 NAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 379 ~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.+++.++++++|.++. ...+.+.. .++.++.+.+... ....+.+.|.++||.++.
T Consensus 305 ~~~~l~~~l~~~l~~~~-~~~~~~~~-~~~~iv~~~~~~~---------~~~~~~~~L~~~gI~v~~ 360 (406)
T PRK09295 305 YEQNLMHYALSQLESVP-DLTLYGPQ-NRLGVIAFNLGKH---------HAYDVGSFLDNYGIAVRT 360 (406)
T ss_pred HHHHHHHHHHHHHhcCC-CEEEeCCC-CCceEEEEEECCc---------CHHHHHHHHHhCCeEEec
Confidence 66667777777665541 11111111 1233555554211 124567778889998864
No 221
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.66 E-value=8.7e-14 Score=140.49 Aligned_cols=287 Identities=18% Similarity=0.141 Sum_probs=171.3
Q ss_pred CCHHHHHHHHHHHHhccccccccc--chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh----cCCCeEEE
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYL--NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY----TGCNDIIS 189 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~--~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~----t~~~~ii~ 189 (447)
.+|.+.+|+.+.+.........++ .....++.++|+++++.+.+.++++++|++++..++..++.. .+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 567888887776544221122233 344578889999998765566788999999999998766532 23357888
Q ss_pred EcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCce
Q 013235 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (447)
Q Consensus 190 ~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~ 269 (447)
.+++|..+...+ ...+ ..+..++.+. .+..| ++++++.+.. +.++.+++.| .+++|.
T Consensus 112 ~~~~h~~~~~~~-~~~G----------~~~~~v~~~~----~~~~d----~~~l~~~l~~---~~~~vv~~~~-~~~tG~ 168 (373)
T TIGR03812 112 PESAHFSFEKAA-EMLG----------LELRYAPLDE----DYTVD----VKDVEDLIDD---NTIGIVGIAG-TTELGQ 168 (373)
T ss_pred CCcchHHHHHHH-HHcC----------CeEEEEeeCC----CCCcC----HHHHHHHHhh---CcEEEEEECC-CCCCCc
Confidence 777765432211 1111 0122233211 12233 5667777653 2345666766 456788
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc--ccCC---CCCEEEee--ccccCCccccccc-cCHHH
Q 013235 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE--AHGV---VPDIVTMA--KGIGNGIPLGAVV-TTPEI 341 (447)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~--~~gv---~pDivt~s--K~lg~G~pigav~-~~~~i 341 (447)
+.+ +++|.++|+++|+++|+||+|.++-. +-.-|+.. ..++ ..|.++++ |-..++.|.|+++ .++++
T Consensus 169 ~~~----~~~i~~l~~~~~~~livD~a~~~~~~-~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~ 243 (373)
T TIGR03812 169 IDD----IEELSKIALENGIYLHVDAAFGGFVI-PFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSY 243 (373)
T ss_pred cCC----HHHHHHHHHHcCCeEEEEcCchhHHH-HHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHH
Confidence 766 99999999999999999999975421 00000011 1111 24666553 7323457887665 57788
Q ss_pred HHhhcCCc-ccc-------cCCCChHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHHhcCCeeeEeeccee
Q 013235 342 AEVLTRRN-YFN-------TFGGNPVCTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410 (447)
Q Consensus 342 ~~~l~~~~-~~~-------T~~~np~a~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~ 410 (447)
.+.+.... +.. +...++.+++++.++|+.+.+++ +.++..++.++|+++|+++ .+..+ +.+...+
T Consensus 244 ~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~~~~ 319 (373)
T TIGR03812 244 LKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI--GFEPV--IEPVLNI 319 (373)
T ss_pred HhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEE--cCCCceE
Confidence 77664221 111 01234567778888898876543 5678888888888888775 22211 1233344
Q ss_pred EEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 411 LGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 411 ~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.+.+. . ...+.+.|.++||++..
T Consensus 320 v~~~~~--------~---~~~v~~~L~~~gi~v~~ 343 (373)
T TIGR03812 320 VAFEVD--------D---PEEVRKKLRDRGWYVSV 343 (373)
T ss_pred EEEEeC--------C---HHHHHHHHHHCCceecc
Confidence 444431 1 24688899999999864
No 222
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.65 E-value=9e-14 Score=140.89 Aligned_cols=293 Identities=15% Similarity=0.111 Sum_probs=170.1
Q ss_pred EEEecCCcccccCCCCCHHHHHHHHHHHHhc-ccccccc-----cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHH
Q 013235 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRI-QHSTVLY-----LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELA 174 (447)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~~~-----~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~A 174 (447)
|||..+. +-.++.|.+|+.+.+... ......+ ......++.+++++.++.+.+.|+|++||++++..+
T Consensus 2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 6665432 346789999998877642 1111111 123456788999999987677899999999999999
Q ss_pred HHHHHhh-cCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 013235 175 IMMARLY-TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (447)
Q Consensus 175 ik~ar~~-t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (447)
++..... .+++.|++....|++.......+.. .|+.....|.... +..| .+++++.+. +
T Consensus 76 l~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~----------~G~~v~~v~~~~~--g~~~----~~~l~~~i~---~- 135 (379)
T TIGR03402 76 IKSALAAQPEKRHIITTAVEHPAVLSLCQHLEK----------QGYKVTYLPVDEE--GRLD----LEELRAAIT---D- 135 (379)
T ss_pred HHHHHHhcCCCCeEEEcccccHHHHHHHHHHHH----------cCCEEEEEccCCC--CcCC----HHHHHHhcC---C-
Confidence 9876432 3455666666666543222111110 1222222221111 1123 566777664 2
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCcc
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIP 331 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~p 331 (447)
++..+++..+++.+|.+.+ +++|.++|+++|+++|+|++|+ +|.. .++.....+|++++| | +.|...
T Consensus 136 ~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G 204 (379)
T TIGR03402 136 DTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI-----PIDLKEMNIDMLSLSGHK-LHGPKG 204 (379)
T ss_pred CcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc-----ccCcccCCCCEEEEcHHH-cCCCCc
Confidence 5677888878888999887 8999999999999999999996 4421 123333567999999 9 654344
Q ss_pred ccccccCHHHHHhhcCCcc-------cccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 332 LGAVVTTPEIAEVLTRRNY-------FNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 332 igav~~~~~i~~~l~~~~~-------~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
+|++..+++.. +.+... .....-|..+..+..++++.+.+ ++..++.+++.++++++|.+ ..+.+.
T Consensus 205 ~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~~ 279 (379)
T TIGR03402 205 VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA---RIPDAR 279 (379)
T ss_pred eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---hCCCEE
Confidence 67777776541 221110 11122345555556667776643 12334555555566665553 122111
Q ss_pred eEee----c-ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 403 DVRG----R-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 403 ~vrg----~-Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+-| + ...+.+.+.. ++ ..++...|.++||.++.
T Consensus 280 -~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~l~~~gI~v~~ 317 (379)
T TIGR03402 280 -LNGDPTKRLPNTVNISFEY------IE---GEAILLLLDMEGICASS 317 (379)
T ss_pred -EeCCCccCCCCEEEEEecC------CC---HHHHHHhhccCCEEEEc
Confidence 111 1 1122232211 11 24677788889999864
No 223
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=5.4e-14 Score=135.35 Aligned_cols=215 Identities=19% Similarity=0.166 Sum_probs=140.8
Q ss_pred CeEEEecCCcccccCC--CCCHHHHHHHHHHHHhcc---cccccccchHHHHHHHHHHHhCCCC--CceEEEcCCHHHHH
Q 013235 99 RRYLDAFGGIATVCCG--HCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMPGN--LKVVFFTNSGTEAN 171 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lG--h~~p~v~~A~~~~l~~~~---~~~~~~~~~~~~elae~L~~~~~~~--~~~v~~~~sGseA~ 171 (447)
+.+|-+..|..++ +| -..++..+|+.+.+.... ++...+.-..+.+.+|.|.+.++.. .+.|+++.+.++|+
T Consensus 61 k~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 61 KPILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred ceeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 3566555544432 11 134688899999887652 1222223344455566655555433 46799999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 172 e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
|.++.... ..+..|+..+++|.=+...+... +....+++. -....|..| ++.+|.++++
T Consensus 140 e~~i~~LA--~p~aNILlPrPGfp~Y~~~a~~~-~lEVR~ydl------------LPe~~weID----L~~veal~DE-- 198 (447)
T KOG0259|consen 140 ELAISSLA--NPGANILLPRPGFPLYDTRAIYS-GLEVRYYDL------------LPEKDWEID----LDGVEALADE-- 198 (447)
T ss_pred HHHHHHhc--CCCCceecCCCCCchHHHhhhhc-CceeEeecc------------cCcccceec----hHHHHHhhcc--
Confidence 99997543 37789999999995433322211 111111211 112234455 7788888874
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE---eecccc-
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT---MAKGIG- 327 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt---~sK~lg- 327 (447)
+++|.||++|.+..|++ ++.+-|++|.++|+|+|+++|.||||..+-..+..|.....+.-..-++| +||+.=
T Consensus 199 -NT~AivviNP~NPcGnV--ys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~V 275 (447)
T KOG0259|consen 199 -NTVAIVVINPNNPCGNV--YSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIV 275 (447)
T ss_pred -CeeEEEEeCCCCCCccc--ccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeeccccccccc
Confidence 48899999999888854 57888999999999999999999999877666655545544443333444 668876
Q ss_pred CCccccccccC
Q 013235 328 NGIPLGAVVTT 338 (447)
Q Consensus 328 ~G~pigav~~~ 338 (447)
.||++||++..
T Consensus 276 PGWRlGWi~~h 286 (447)
T KOG0259|consen 276 PGWRLGWIALH 286 (447)
T ss_pred CCceeeeEEEe
Confidence 69999999874
No 224
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.64 E-value=7.3e-14 Score=140.74 Aligned_cols=286 Identities=14% Similarity=0.084 Sum_probs=172.4
Q ss_pred CCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCC--ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~--~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~ 193 (447)
.++.|.+|+.++. .|.. ........++.++|+++++... +.+++++||+++++.++.... ..++++++..++
T Consensus 14 ~~~~v~~~~~~~~---~~~~-~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--~~~~~vlv~~~~ 87 (363)
T TIGR02326 14 TSRTVKEAMLFDW---CTWD-SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--PKDGKLLVVING 87 (363)
T ss_pred CCHHHHHHhCCCC---CCCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--CCCCeEEEEeCC
Confidence 3566666654433 1211 1234456778889999887643 368999999999999997543 255677777777
Q ss_pred cccCchhhh-hccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeC
Q 013235 194 YHGNAAGTM-GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (447)
Q Consensus 194 yHG~~~~~~-~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~ 272 (447)
+|+.....+ ...+ ..+..++.+. . ...| .+++++.+... + ++..+.+--+.+.+|.+.+
T Consensus 88 ~~~~~~~~~a~~~g----------~~~~~v~~~~--~--~~~d----~~~l~~~l~~~-~-~~~~v~~~~~~~~tG~~~~ 147 (363)
T TIGR02326 88 AYGARIVQIAEYLG----------IPHHVVDTGE--V--EPPD----VVEVEAILAAD-P-AITHIALVHCETTTGILNP 147 (363)
T ss_pred hhhHHHHHHHHHcC----------CceEEEeCCC--C--CCCC----HHHHHHHHhhC-C-CccEEEEEeecCCccccCc
Confidence 776532111 1100 1233333221 1 1123 56777777642 2 3334444445677888887
Q ss_pred CCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccCCccccccccCHHHHHhhcCCc-
Q 013235 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNGIPLGAVVTTPEIAEVLTRRN- 349 (447)
Q Consensus 273 ~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~pigav~~~~~i~~~l~~~~- 349 (447)
+++|.++|++||+++|+|++|+ +|... .....+ .+|+++ +.|.++++..+|+++++++.++.+....
T Consensus 148 ----i~~I~~l~~~~g~~livD~~~~-~g~~~---~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~ 217 (363)
T TIGR02326 148 ----IEAVAKLAHRHGKVTIVDAMSS-FGGIP---IDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNAR 217 (363)
T ss_pred ----HHHHHHHHHHcCCEEEEEcccc-ccCcc---cchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCC
Confidence 8999999999999999999985 55322 222333 468875 5699976555799999998876543210
Q ss_pred -----------------ccccCCCChHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHhcCCeee--Eee
Q 013235 350 -----------------YFNTFGGNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIGD--VRG 406 (447)
Q Consensus 350 -----------------~~~T~~~np~a~aaala~L~~i~~~----~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrg 406 (447)
....|..++....+..++|+.+.++ +..++.+++.+++++.|+++ .+..+.. .+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~- 294 (363)
T TIGR02326 218 SLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL--GFEPLLDDEIQ- 294 (363)
T ss_pred ceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccC-
Confidence 0123455666777777788776544 34566777777777777665 2222211 11
Q ss_pred cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 407 ~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
.+.+..+.+.+.. .....++.+.|.++||.+.+.
T Consensus 295 ~~~~~~~~~~~~~------~~~~~~v~~~L~~~gi~v~~g 328 (363)
T TIGR02326 295 SPIITSFYSPEDP------DYRFADFYQRLKEQGFVIYPG 328 (363)
T ss_pred CceEEEEECCCCC------CCCHHHHHHHHHHCCEEEECC
Confidence 2344555543210 012356888999999999654
No 225
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.64 E-value=1.5e-13 Score=142.22 Aligned_cols=311 Identities=15% Similarity=0.091 Sum_probs=176.3
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
|.-++||..--++ ..+.+++.+++.... ..| .+....+|.+++++++. .+.+++++||++|+..++.
T Consensus 44 g~p~~D~~tds~t-------~a~~~a~~~a~~~g~---~~Y~~~~g~~~Lreaia~~~~--~~~vv~t~ggt~A~~~~~~ 111 (460)
T PRK13238 44 EDVFIDLLTDSGT-------GAMSDRQWAAMMRGD---EAYAGSRSYYRLEDAVKDIFG--YPYTIPTHQGRAAEQILFP 111 (460)
T ss_pred CCCCCCCCCCCCc-------hhhhHHHHHHHHhCC---cccCCCCCHHHHHHHHHHHhC--CCcEEECCCHHHHHHHHHH
Confidence 4456777642221 146777777765432 234 35677899999999984 4678999999999999987
Q ss_pred HHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCC---c-CCCCC--CChHHHHHHHHHHHHcc
Q 013235 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP---Y-RGVFG--ADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 177 ~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~---~-~~~~~--~d~~~~~~~le~~i~~~ 250 (447)
.. ..+++ ||...+.|........ ..+. ....++.... . ..+|. .| .++|++.+...
T Consensus 112 al--l~pGD-Vii~~p~~~~~~~~i~-~~G~----------~~v~v~~~~~~~~~~~~~f~g~id----~e~Le~~i~~~ 173 (460)
T PRK13238 112 VL--IKKGD-VVPSNYHFDTTRAHIE-LNGA----------TAVDLVIDEALDTGSRHPFKGNFD----LEKLEALIEEV 173 (460)
T ss_pred Hh--CCCCC-EEccCCcccchHHHHH-HcCC----------EEEEEeccccccccccccccCCcC----HHHHHHHHhhc
Confidence 54 22344 7777676654332222 2111 1112221100 0 01222 34 67888888754
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC----cccc---CCCccccc----ccCCCCCE
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG----FART---GSHFWGFE----AHGVVPDI 319 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG----fgr~---G~~~~~~~----~~gv~pDi 319 (447)
+++++++|+++..++.+|-.+.+.+.+++|+++|++||++||.|+++.. |... |....... ..+-..|+
T Consensus 174 ~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~ 253 (460)
T PRK13238 174 GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADG 253 (460)
T ss_pred CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcE
Confidence 4457888888876666554555788899999999999999999997742 2110 10000000 00123688
Q ss_pred EEeeccccCC-ccccc-cccC-HHHHHhhcCCc---c-cccCCCChHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHH
Q 013235 320 VTMAKGIGNG-IPLGA-VVTT-PEIAEVLTRRN---Y-FNTFGGNPVCTAAGHA-VLKVIQKDKLQNNAHVVGSYLKERL 391 (447)
Q Consensus 320 vt~sK~lg~G-~piga-v~~~-~~i~~~l~~~~---~-~~T~~~np~a~aaala-~L~~i~~~~l~~~~~~~g~~l~~~L 391 (447)
++|+ +.-.| .|+|+ ++++ +++++.+.... + +.||++++..+.+|++ +|+...++++.+...+..++|.+.|
T Consensus 254 ~~~S-g~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L 332 (460)
T PRK13238 254 LTMS-AKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGL 332 (460)
T ss_pred EEEe-cccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHH
Confidence 8776 21112 24444 4455 57777775532 2 4599998777666665 4554434455544444557888877
Q ss_pred HHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHH-HHHHHHHHHH-hCCceee
Q 013235 392 TALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKA-ETLYIMDKMK-GICALFF 444 (447)
Q Consensus 392 ~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~-~~~~~~~~l~-~~Gvlv~ 444 (447)
.+. .++++. +..|.++.+++.+-.. ..|... ...+++..|+ +.||.+-
T Consensus 333 ~~~--G~~~~~--p~Gg~~v~~d~~~~~~-~~~~~~~~~~~~a~~L~~e~GV~~~ 382 (460)
T PRK13238 333 EEA--GVPIQT--PAGGHAVFVDAGKFLP-HIPAEQFPAQALACELYLEAGIRGV 382 (460)
T ss_pred HHC--CCCeEc--cCCceEEEEEchhcCC-CCCCCCCchHHHHHHHHHHcCeeee
Confidence 774 444443 3445666666632100 001000 1245666665 5688763
No 226
>PLN02397 aspartate transaminase
Probab=99.64 E-value=4.1e-14 Score=145.50 Aligned_cols=272 Identities=15% Similarity=0.050 Sum_probs=145.4
Q ss_pred chHHHHHHHHHHHhCCCC------CceEE--EcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcc
Q 013235 140 NHAIADFAEALASKMPGN------LKVVF--FTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK 211 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~------~~~v~--~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~ 211 (447)
.....+|.+.+++++... .+.|. .+.+|+.+.+++..+.....+++.|++.+++|.+....+...
T Consensus 90 ~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~------- 162 (423)
T PLN02397 90 IEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDA------- 162 (423)
T ss_pred cCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHc-------
Confidence 445677777777765321 12231 123333343433333333336688999999997776544433
Q ss_pred ccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEE
Q 013235 212 FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291 (447)
Q Consensus 212 ~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ll 291 (447)
|...+++|......|+.| .+.+++.+....+ +..++++...++++|.+. +.+.+++|.++|++||+++
T Consensus 163 ------g~~~~~v~l~~~~~~~~d----~~~l~~~l~~~~~-~~~~i~~~~P~NPTG~v~-s~e~l~~i~~~a~~~~~~v 230 (423)
T PLN02397 163 ------GVPVRTYRYYDPKTRGLD----FDGLLEDLKAAPD-GSFVLLHACAHNPTGVDP-TPEQWEQISDLIKSKNHLP 230 (423)
T ss_pred ------CCeEEEeecccCcCCccC----HHHHHHHHHhCCC-CCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEE
Confidence 222223222111123345 4445555543322 444555554566677665 7889999999999999999
Q ss_pred EEeccccCccccCC--Cccccccc-CCCCCEE---Eeecccc-CCccccccc---cCHHHHHhhc----CCcccccCCCC
Q 013235 292 IADEVQAGFARTGS--HFWGFEAH-GVVPDIV---TMAKGIG-NGIPLGAVV---TTPEIAEVLT----RRNYFNTFGGN 357 (447)
Q Consensus 292 I~DEv~tGfgr~G~--~~~~~~~~-gv~pDiv---t~sK~lg-~G~pigav~---~~~~i~~~l~----~~~~~~T~~~n 357 (447)
|.||+|.+|...+. .......+ ...++++ +|||.++ .|+|+||++ .++++++.+. .......++.+
T Consensus 231 I~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (423)
T PLN02397 231 FFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPP 310 (423)
T ss_pred EEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCc
Confidence 99999999964330 11111111 1112344 6899999 799999984 4666554332 11111223345
Q ss_pred hHHHHHHHHHHHHHh-h-------hhHHHHHHHHHHHHHHHHHHHHHhcCCeee-EeecceeEEEEEeeCCCCCCCCHHH
Q 013235 358 PVCTAAGHAVLKVIQ-K-------DKLQNNAHVVGSYLKERLTALKDKYGIIGD-VRGRGFLLGVEFVTDRQLKTPAKAE 428 (447)
Q Consensus 358 p~a~aaala~L~~i~-~-------~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~-vrg~Gl~~giel~~~~~~~~p~~~~ 428 (447)
.+++.++.+.|+.-. . +++.+..+++.+.+.+.|+++.... .+.. .+..|+++++.+.
T Consensus 311 ~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~-~~~~~~p~gg~fl~~~l~------------ 377 (423)
T PLN02397 311 IHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPG-DWSHITKQIGMFSFTGLN------------ 377 (423)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCcccCCceEEEecCCC------------
Confidence 566666666663210 0 1223344444444555444431000 0122 2445777777651
Q ss_pred HHHHHHHHH-hCCceee
Q 013235 429 TLYIMDKMK-GICALFF 444 (447)
Q Consensus 429 ~~~~~~~l~-~~Gvlv~ 444 (447)
.++++.|+ +.||++.
T Consensus 378 -~~~~~~Ll~~~~V~v~ 393 (423)
T PLN02397 378 -KEQVDRMTKEYHIYMT 393 (423)
T ss_pred -HHHHHHHHHhCCEEEC
Confidence 23667775 5599874
No 227
>PLN02651 cysteine desulfurase
Probab=99.62 E-value=6.3e-14 Score=141.32 Aligned_cols=247 Identities=16% Similarity=0.095 Sum_probs=153.7
Q ss_pred CCCCHHHHHHHHHHHHhcc-cccc------cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh--cCC
Q 013235 114 GHCHPYVVDSIVNQIKRIQ-HSTV------LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--TGC 184 (447)
Q Consensus 114 Gh~~p~v~~A~~~~l~~~~-~~~~------~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~--t~~ 184 (447)
+--++.|.+++.+.+.... .... ....+...++.++|++.+..+.+.++|++|+|+++..+++.+... .++
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g 88 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKK 88 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCC
Confidence 3457899999988775421 1110 111344667889999998766678999999999999999876432 345
Q ss_pred CeEEEEcCCcccCchhhhhccCCCCccccccCCC--eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEcc
Q 013235 185 NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG--VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES 262 (447)
Q Consensus 185 ~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g--~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Ep 262 (447)
++|++....|++.......+. ..| +..++... .+..| .+++++.+.. ++.++++..
T Consensus 89 ~~vl~~~~~h~s~~~~~~~~~----------~~g~~v~~v~~~~----~~~~d----~~~l~~~i~~----~t~lv~v~~ 146 (364)
T PLN02651 89 KHVITTQTEHKCVLDSCRHLQ----------QEGFEVTYLPVKS----DGLVD----LDELAAAIRP----DTALVSVMA 146 (364)
T ss_pred CEEEEcccccHHHHHHHHHHH----------hcCCEEEEEccCC----CCcCC----HHHHHHhcCC----CcEEEEEEC
Confidence 677776655544322211111 012 22333211 11123 5667776642 567888888
Q ss_pred ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHH
Q 013235 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPE 340 (447)
Q Consensus 263 i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~ 340 (447)
+++.+|.+.+ +++|.++|+++|+++++|.+|+ +|.. .+-.+. ..+|+++++ | +++...+|+++.+++
T Consensus 147 ~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~---~~~~~~--~~~D~~~~s~hK-~~gp~G~g~l~v~~~ 215 (364)
T PLN02651 147 VNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI---PVDVDD--LGVDLMSISGHK-IYGPKGVGALYVRRR 215 (364)
T ss_pred CCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc---ccCccc--CCCCEEEechhh-hCCCCceEEEEEcCC
Confidence 8888999887 9999999999999999999996 4321 122233 346999876 7 643345788888887
Q ss_pred HHHhhcCCcc-------cccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHH
Q 013235 341 IAEVLTRRNY-------FNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTA 393 (447)
Q Consensus 341 i~~~l~~~~~-------~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~ 393 (447)
..+.+..... .....-|..++.+..++|+.+.+ ++..++.+++.++++++|.+
T Consensus 216 ~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 216 PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred CCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 6554433211 11222345566666678887754 23445666666666666654
No 228
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.62 E-value=1.7e-13 Score=137.64 Aligned_cols=282 Identities=14% Similarity=0.119 Sum_probs=172.6
Q ss_pred CCHHHHHHHHHHHHhccccccccc--chHHHHHHHHHHHhCCC-CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcC
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYL--NHAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN 192 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~--~~~~~elae~L~~~~~~-~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~ 192 (447)
.+++|.+|+.+.+.. ..+. .....++++.|++.+.. ..+.+++++||++|+..+++... ..++.|++...
T Consensus 10 ~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~--~~g~~vl~~~~ 82 (356)
T cd06451 10 VPPRVLKAMNRPMLG-----HRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--EPGDKVLVGVN 82 (356)
T ss_pred CCHHHHHHhCCCccC-----CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--CCCCEEEEecC
Confidence 467777777543221 1222 34467888999999875 33468899999999999997542 35678888877
Q ss_pred CcccCch-hhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceee
Q 013235 193 AYHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIE 271 (447)
Q Consensus 193 ~yHG~~~-~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~ 271 (447)
++++... ......+ ..+..++... .+..| .+++++.+.. .+++++++...+++.|.+.
T Consensus 83 ~~~~~~~~~~~~~~g----------~~~~~v~~~~----~~~~~----~~~l~~~i~~---~~~~~v~i~~~~~~~G~~~ 141 (356)
T cd06451 83 GVFGDRWADMAERYG----------ADVDVVEKPW----GEAVS----PEEIAEALEQ---HDIKAVTLTHNETSTGVLN 141 (356)
T ss_pred CchhHHHHHHHHHhC----------CCeEEeecCC----CCCCC----HHHHHHHHhc---cCCCEEEEeccCCCccccc
Confidence 7665321 1111111 1223333211 12234 5667777653 2456676666677788887
Q ss_pred CCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEe--eccccCCccccccccCHHHHHhhcC--
Q 013235 272 LAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGNGIPLGAVVTTPEIAEVLTR-- 347 (447)
Q Consensus 272 ~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~--sK~lg~G~pigav~~~~~i~~~l~~-- 347 (447)
+ +++|.++|+++|+++|+|++|. +|.. .+....+ .+|+++. .|.++++..+|+++.+++.++.+..
T Consensus 142 ~----~~~i~~~a~~~~~~li~D~~~~-~g~~---~~~~~~~--~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~ 211 (356)
T cd06451 142 P----LEGIGALAKKHDALLIVDAVSS-LGGE---PFRMDEW--GVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKT 211 (356)
T ss_pred C----HHHHHHHHHhcCCEEEEeeehh-ccCc---ccccccc--CccEEEecCchhccCCCCcceeEECHHHHHHHHhcC
Confidence 6 9999999999999999999985 5422 2222223 3577754 5999876678999999998877652
Q ss_pred C--cc---------------cccCCCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeec
Q 013235 348 R--NY---------------FNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR 407 (447)
Q Consensus 348 ~--~~---------------~~T~~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~ 407 (447)
. .. +.+.+.++...+++.++++.+.+. .+.++.+++.+++++.|.++ .+..+....+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~ 289 (356)
T cd06451 212 KPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL--GLKLLAKPELR 289 (356)
T ss_pred CCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccC
Confidence 1 11 111123455566777888877654 35667777778888887765 23222221222
Q ss_pred -ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-Cceeec
Q 013235 408 -GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-CALFFS 445 (447)
Q Consensus 408 -Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~ 445 (447)
+.+..+.+. +. ....++++.|.++ ||.+.+
T Consensus 290 ~~~~~~~~~~-~~-------~~~~~~~~~L~~~~gI~~~~ 321 (356)
T cd06451 290 SPTVTAVLVP-EG-------VDGDEVVRRLMKRYNIEIAG 321 (356)
T ss_pred CCceEEEECC-CC-------CCHHHHHHHHHHhCCEEEec
Confidence 222233331 11 1245789999998 998864
No 229
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.62 E-value=4.3e-14 Score=143.26 Aligned_cols=241 Identities=17% Similarity=0.174 Sum_probs=149.2
Q ss_pred cccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 135 ~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
..+|.++...+|+++|++..+. +.+++++||++|+.++++... ..+++|++... .||.+...+... .
T Consensus 48 y~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~--~~Gd~Vl~~~~-~~~~t~~~~~~~--------~ 114 (380)
T TIGR01325 48 YSRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLL--QAGDHVVASRS-LFGSTVGFISEI--------L 114 (380)
T ss_pred eecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEecC-CcchHHHHHHHH--------H
Confidence 3467788899999999998854 567889999999999997542 24567777654 555554332110 0
Q ss_pred cCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
...|+.....+. .| .+++++.+. .++++|++|..+++.|.+.+ +++|.++|+++|+++|+|
T Consensus 115 ~~~g~~v~~v~~-------~d----~~~l~~~i~----~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD 175 (380)
T TIGR01325 115 PRFGIEVSFVDP-------TD----LNAWEAAVK----PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVD 175 (380)
T ss_pred HHhCCEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEE
Confidence 011222222111 12 455666553 25789999988888888876 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEE--eeccccC-Cccc-cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
|++..+- + .......+|+++ ++|.++| |.++ |++++++++++.+...........+|..++.++..|+.
T Consensus 176 ~a~~~~~--~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~t 248 (380)
T TIGR01325 176 NVFATPV--L-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLET 248 (380)
T ss_pred CCCcccc--c-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCc
Confidence 9986321 1 111233469886 7899986 5665 77888888877665321111112346666666666665
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHH--H--hcCCe----------eeEeecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALK--D--KYGII----------GDVRGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~--~--~~~~i----------~~vrg~Gl~~giel~ 416 (447)
+.. ..++..+....+.+.|++.. + .||.. ....|.|-|+.|++.
T Consensus 249 l~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 249 LSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred HHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 532 23334444444444444321 0 02111 112467889999995
No 230
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.62 E-value=7.4e-14 Score=139.76 Aligned_cols=273 Identities=18% Similarity=0.154 Sum_probs=167.2
Q ss_pred HHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhh
Q 013235 122 DSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT 201 (447)
Q Consensus 122 ~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~ 201 (447)
+++.+.+....+ +..+...+++++|+++++ .+.+++++||++|++.+++..+. ..++.|++...+||+.....
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~la~~~~--~~~~~~~~sgt~al~~~l~~l~~-~~gd~vl~~~~~~~~~~~~~ 75 (352)
T cd00616 3 EAVEEVLDSGWL----TLGPKVREFEKAFAEYLG--VKYAVAVSSGTAALHLALRALGI-GPGDEVIVPSFTFVATANAI 75 (352)
T ss_pred HHHHHHHHcCCc----cCCHHHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHcCC-CCCCEEEeCCcchHHHHHHH
Confidence 345554444322 346778899999999985 35688899999999999987642 35678999999998654433
Q ss_pred hhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHH
Q 013235 202 MGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVY 281 (447)
Q Consensus 202 ~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~ 281 (447)
... |+.....+... ..+..| .+++++.+. + ++++|++..+ .|...+ +++|.
T Consensus 76 ~~~-------------g~~~~~~~~~~-~~~~~d----~~~l~~~i~---~-~~~~v~~~~~---~G~~~~----~~~i~ 126 (352)
T cd00616 76 LLL-------------GATPVFVDIDP-DTYNID----PELIEAAIT---P-RTKAIIPVHL---YGNPAD----MDAIM 126 (352)
T ss_pred HHc-------------CCeEEEEecCC-CcCCcC----HHHHHHhcC---c-CCeEEEEECC---CCCcCC----HHHHH
Confidence 221 22222211111 122234 556666653 2 5667776543 455544 89999
Q ss_pred HHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee----ccccCCccccccccC-HHHHHhhcC---Cc----
Q 013235 282 KSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTR---RN---- 349 (447)
Q Consensus 282 ~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pigav~~~-~~i~~~l~~---~~---- 349 (447)
++|+++|+++|+|++|+ +|... .....+...|+.++| |.+++| +.|+++++ +++.+.+.. ..
T Consensus 127 ~l~~~~~i~li~D~a~~-~g~~~----~~~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T cd00616 127 AIAKRHGLPVIEDAAQA-LGATY----KGRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRD 200 (352)
T ss_pred HHHHHcCCeEEEECCCC-CCCeE----CCEEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCC
Confidence 99999999999999997 43221 112234446888877 999543 34667665 566654432 10
Q ss_pred --------ccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe---ecceeEEEEEeeC
Q 013235 350 --------YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR---GRGFLLGVEFVTD 418 (447)
Q Consensus 350 --------~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr---g~Gl~~giel~~~ 418 (447)
...++..+++.++.++..++.+ +++.++.+++.+++++.|.++. ...++.... ....++.+.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (352)
T cd00616 201 RFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPE 277 (352)
T ss_pred CCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCc
Confidence 1123456788888888777655 4466778888889988887742 222222111 1234455554210
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 419 RQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 419 ~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
. .....++.+.|.++||.++.
T Consensus 278 --~----~~~~~~v~~~L~~~gI~~~~ 298 (352)
T cd00616 278 --A----GESRDELIEALKEAGIETRV 298 (352)
T ss_pred --C----CCCHHHHHHHHHHCCCCeee
Confidence 0 01246788999999997763
No 231
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.61 E-value=2.5e-13 Score=139.28 Aligned_cols=288 Identities=14% Similarity=0.089 Sum_probs=162.1
Q ss_pred CCHHHHHHHHHHH-Hhcccc--cccc--cchHHHHHHH----HHHHhCCCCCceE-EEcCCHHHHHHHHHHHHHhhcCCC
Q 013235 116 CHPYVVDSIVNQI-KRIQHS--TVLY--LNHAIADFAE----ALASKMPGNLKVV-FFTNSGTEANELAIMMARLYTGCN 185 (447)
Q Consensus 116 ~~p~v~~A~~~~l-~~~~~~--~~~~--~~~~~~elae----~L~~~~~~~~~~v-~~~~sGseA~e~Aik~ar~~t~~~ 185 (447)
-||+|.+|+...+ .+++.. ..++ -++...+|++ ++++++.. +.+ ++++||+.||.+++... ..+++
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~--~~alv~~~SG~~A~~~~l~al--~~~GD 115 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGC--DYANVQPHSGSQANGAVYLAL--LKPGD 115 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCC--CceEEecCCcHHHHHHHHHHh--cCCCC
Confidence 4899999999985 665432 1122 1577788888 99998854 445 45799999999999754 33567
Q ss_pred eEEEEcCCcccCch-hhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEE-ccc
Q 013235 186 DIISLRNAYHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLS-ESI 263 (447)
Q Consensus 186 ~ii~~~~~yHG~~~-~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~-Epi 263 (447)
.|++.+.++.+... ++. .+....+ .....+.-. ...+..| .+++++.+... ++.+|++ +++
T Consensus 116 ~Vl~~~~~~~~~~~~g~~-~~~~~~~--------~~~~~~~~~-~~~~~~d----~~~le~~l~~~---~~klVi~~~~~ 178 (416)
T PRK13034 116 TILGMSLSHGGHLTHGAK-VSLSGKW--------YNAVQYGVD-RLTGLID----YDEVEELAKEH---KPKLIIAGFSA 178 (416)
T ss_pred EEEEcCccceeeeecCCc-ceeccce--------eeeEEcccc-cccCCcC----HHHHHHHHhhc---CCeEEEECCCc
Confidence 77776666544111 111 0000000 000000000 0011134 56677776532 3456777 566
Q ss_pred cCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccCCccccccccCHH-
Q 013235 264 QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNGIPLGAVVTTPE- 340 (447)
Q Consensus 264 ~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~pigav~~~~~- 340 (447)
.|. ..+ +++|.++|++||+++|+|++|+ +|-.+. .......+ ..|+++ ++|.++++. -|+++++++
T Consensus 179 ~g~---~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~-g~~~~~~~-~~Di~~~s~~K~l~g~~-GG~v~~~~~~ 247 (416)
T PRK13034 179 YPR---ELD----FARFREIADEVGALLMVDMAHI-AGLVAA-GEHPNPFP-HAHVVTTTTHKTLRGPR-GGMILTNDEE 247 (416)
T ss_pred ccc---ccC----HHHHHHHHHHcCCEEEEeCccc-ccCccc-CCCCCCCC-CceEEEEeCcccCCCCC-CeEEEECcHH
Confidence 543 333 8899999999999999999985 655442 11011111 368775 679996432 255566554
Q ss_pred HHHhhcCCcccccCCC-Ch-HHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEe
Q 013235 341 IAEVLTRRNYFNTFGG-NP-VCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416 (447)
Q Consensus 341 i~~~l~~~~~~~T~~~-np-~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~ 416 (447)
+.+.+....+.+..++ +| ..++++++.++.++. +++.++++++.++|+++|+++ .++.+.. .+...++.|.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~--G~~~~~~-~~~t~i~~v~~~ 324 (416)
T PRK13034 248 IAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER--GYDLVSG-GTDNHLLLVDLR 324 (416)
T ss_pred HHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc--CCEeccC-CCCCcEEEEEcC
Confidence 4444433222111122 23 333334455554432 345789999999999998775 3433211 123455566664
Q ss_pred eCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 417 TDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 417 ~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
++.. ....+.+.|.+.||++..
T Consensus 325 ~~~~-------~~~~~~~~L~~~GI~v~~ 346 (416)
T PRK13034 325 PKGL-------SGKDAEQALERAGITVNK 346 (416)
T ss_pred CCCC-------CHHHHHHHHHhCCcEEec
Confidence 3211 124456788889999863
No 232
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.61 E-value=9.2e-14 Score=142.04 Aligned_cols=259 Identities=14% Similarity=0.116 Sum_probs=156.7
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhccccccc-------ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL-------YLNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-------~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~ 171 (447)
+.|||..+. +-.++.|.+++.+.+......... ...+...+++++|+++++.+.+.|+|++|+++++
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 478997653 235799999998877533111110 1124566788889999876667899999999999
Q ss_pred HHHHHHHHh-h-cCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 172 ELAIMMARL-Y-TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 172 e~Aik~ar~-~-t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
+.+++.... . .+++.|++.... |............. ...+..++.. .. +..| .+++++.+..
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~-h~s~~~~~~~~~~~-------g~~v~~v~~~--~~--~~~d----~~~l~~~l~~ 141 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTE-HKAVLDTCRYLERE-------GFEVTYLPPK--SN--GLID----LEELKAAIRD 141 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCc-cHHHHHHHHHHHhc-------CCEEEEEccC--CC--CcCC----HHHHHHhcCC
Confidence 999876543 2 234566665554 44433222110000 0012233221 11 1123 5666666642
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--cccc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG 327 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg 327 (447)
++.++++..+++++|.+.+ +++|.++|+++|+++|+|++|+ +|.. .++..+..+|+++++ |.+|
T Consensus 142 ----~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~-----~~~~~~~~~D~~~~s~~K~~g 207 (402)
T TIGR02006 142 ----DTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI-----PINVNELKVDLMSISGHKIYG 207 (402)
T ss_pred ----CCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc-----ccCccccCCCEEEEehhhhcC
Confidence 4678888888999999887 9999999999999999999996 4322 123334568999999 9664
Q ss_pred CCccccccccCHHHHHhhcCCcc-------cccCCCChHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHH
Q 013235 328 NGIPLGAVVTTPEIAEVLTRRNY-------FNTFGGNPVCTAAGHAVLKVIQKD--KLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 328 ~G~pigav~~~~~i~~~l~~~~~-------~~T~~~np~a~aaala~L~~i~~~--~l~~~~~~~g~~l~~~L~~l 394 (447)
...+|+++.+++....+....+ +....-|...+++..++|+.+++. ...++.+++.++++++|+++
T Consensus 208 -p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 282 (402)
T TIGR02006 208 -PKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI 282 (402)
T ss_pred -CCceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 2347888887654433322111 111223344444445788877542 23455566666666666543
No 233
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.61 E-value=1e-12 Score=134.25 Aligned_cols=300 Identities=16% Similarity=0.134 Sum_probs=177.8
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccc-c--ccc----cchHHHHHHHHHHHhCCCC-CceEEEcCCHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS-T--VLY----LNHAIADFAEALASKMPGN-LKVVFFTNSGTEAN 171 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~-~--~~~----~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~ 171 (447)
.|||..+ .|-.++.|.+|+.+.+...... . ..+ ......++.+.|++++..+ .++|+|++|+++++
T Consensus 20 ~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 6888642 3445788999988766543111 1 111 1234567888999988765 46899999999999
Q ss_pred HHHHHHHH--hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 172 ELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 172 e~Aik~ar--~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
..++.... ...+++.|++.+..|++.......... ..|+.....|... .+..| .+++++.+.
T Consensus 94 ~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~---------~~g~~~~~v~~~~--~~~~~----~~~l~~~i~- 157 (403)
T TIGR01979 94 NLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAE---------RTGATLKFIPLDD--DGTLD----LDDLEKLLT- 157 (403)
T ss_pred HHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHH---------hcCcEEEEEecCC--CCCCC----HHHHHHHhc-
Confidence 98887542 133567788777777654322111100 0122221111111 11123 466766664
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEe--ecccc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIG 327 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~--sK~lg 327 (447)
+++.++++.-+++.+|.+.+ +++|.++|+++|+++|+|++|. +|.. ..... ...+|++++ .|.+|
T Consensus 158 ---~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~---~~~~~--~~~~d~~~~s~~K~~g 224 (403)
T TIGR01979 158 ---EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM---PVDVQ--ALDCDFYVFSGHKMYG 224 (403)
T ss_pred ---cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc---ccCcc--ccCCCEEEEecccccC
Confidence 25667777777888898887 9999999999999999999985 3321 11122 234788864 59765
Q ss_pred CCccccccccCHHHHHhhcCCccc-----------cc-------C---CCChHHHHHHHHHHHHHhhh---hHHHHHHHH
Q 013235 328 NGIPLGAVVTTPEIAEVLTRRNYF-----------NT-------F---GGNPVCTAAGHAVLKVIQKD---KLQNNAHVV 383 (447)
Q Consensus 328 ~G~pigav~~~~~i~~~l~~~~~~-----------~T-------~---~~np~a~aaala~L~~i~~~---~l~~~~~~~ 383 (447)
. ..+|++++++++.+.+.....+ .+ | ..|..+.++..++|+.+.+. .+.++..++
T Consensus 225 p-~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l 303 (403)
T TIGR01979 225 P-TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHEL 303 (403)
T ss_pred C-CCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 2 2378888998887765421000 00 1 12445566666778776543 456677777
Q ss_pred HHHHHHHHHHHHHhcCCeeeE--eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 384 GSYLKERLTALKDKYGIIGDV--RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 384 g~~l~~~L~~l~~~~~~i~~v--rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.++++++|+++. ...++... ..++.++.+.+... ...++.+.|.++||.++.
T Consensus 304 ~~~l~~~l~~~~-g~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~L~~~gI~v~~ 357 (403)
T TIGR01979 304 TAYALERLGEIP-GLRIYGPRDAEDRGGIISFNVEGV---------HPHDVGTILDEEGIAVRS 357 (403)
T ss_pred HHHHHHHHhcCC-CEEEeCCCCccccCceEEEEeCCc---------CHHHHHHHHhhCCEEEcc
Confidence 777777666541 11111110 01356777776211 134577888899998864
No 234
>PRK02948 cysteine desulfurase; Provisional
Probab=99.60 E-value=4e-13 Score=136.23 Aligned_cols=295 Identities=19% Similarity=0.142 Sum_probs=174.3
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhccc-ccc-----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~-----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~ 173 (447)
.|||.. ..|..++.|.+|+.+.+..... ... ........++++.|+++++.+.+.|+|++|+++++..
T Consensus 2 ~yld~a------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYA------ATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCC------CCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHH
Confidence 466643 2345689999999887765321 111 1123456788899999987667789999999999999
Q ss_pred HHHHHHhh--cCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 013235 174 AIMMARLY--TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (447)
Q Consensus 174 Aik~ar~~--t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (447)
++...... .+++.|++. ...|........... ..|+.....|... .+..| .+++++.+.
T Consensus 76 ~~~~~~~~~~~~g~~vv~~-~~~h~s~~~~~~~~~---------~~g~~v~~v~~~~--~~~~d----~~~l~~~l~--- 136 (381)
T PRK02948 76 AIQSLLNALPQNKKHIITT-PMEHASIHSYFQSLE---------SQGYTVTEIPVDK--SGLIR----LVDLERAIT--- 136 (381)
T ss_pred HHHHHHHhccCCCCEEEEC-CcccHHHHHHHHHHH---------hCCCEEEEEeeCC--CCCCC----HHHHHHhcC---
Confidence 98766421 233455544 444433322221110 0122222222111 11233 566766653
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccC-
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN- 328 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~- 328 (447)
+ ++..|+++.+++++|.+.+ +++|.++|+++|+++|+|++|+ ||... ...+.++ .|+++ ++|.+|.
T Consensus 137 ~-~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~---~~~~~~~--~d~~~~s~~K~~gp~ 205 (381)
T PRK02948 137 P-DTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP---IDVFEMG--IDSLSVSAHKIYGPK 205 (381)
T ss_pred C-CCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc---cCcccCC--CCEEEecHHhcCCCC
Confidence 2 4567888888888999987 8999999999999999999885 66432 1123333 57774 6697762
Q ss_pred CccccccccCHHHH-HhhcC----CcccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 329 GIPLGAVVTTPEIA-EVLTR----RNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 329 G~pigav~~~~~i~-~~l~~----~~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
| +|+++.++++. ..+.. ...+..+..|..+.+++.++|+.+.+ ++..++++++.++++++|+++ .+. +
T Consensus 206 G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~-v 280 (381)
T PRK02948 206 G--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL--PLP-I 280 (381)
T ss_pred c--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCC-E
Confidence 4 68888777641 11110 00123455778888888888887632 345566777777777777665 222 1
Q ss_pred eeEee-----cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 402 GDVRG-----RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 402 ~~vrg-----~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
. ..+ ...++++.+.. . ...++...|.++||.++.
T Consensus 281 ~-~~~~~~~~~~~i~~~~~~~-----~----~~~~~~~~l~~~gI~v~~ 319 (381)
T PRK02948 281 E-VEGHSTSCLPHIIGVTIKG-----I----EGQYTMLECNRRGIAIST 319 (381)
T ss_pred E-EeCCCccCcCCEEEEEeCC-----C----CHHHHHHhcccCCEEEEc
Confidence 1 111 11233333311 0 134566778889999974
No 235
>PRK08637 hypothetical protein; Provisional
Probab=99.60 E-value=2e-13 Score=138.98 Aligned_cols=253 Identities=14% Similarity=0.087 Sum_probs=151.6
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHH
Q 013235 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEM 238 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~ 238 (447)
+++++++++++++..+++... ..++.|++.+++|........... |...+.+|... ..++-|
T Consensus 70 ~~I~it~G~~~al~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~~------------g~~vv~v~~~~-~~~~~d--- 131 (388)
T PRK08637 70 SLPIVTNALTHGLSLVADLFV--DQGDTVLLPDHNWGNYKLTFNTRR------------GAEIVTYPIFD-EDGGFD--- 131 (388)
T ss_pred ceeeEccchHHHHHHHHHHhc--CCCCEEEEcCCCCccHHHHHHHhc------------CCEEEEecccC-CCCcCC---
Confidence 568999999999998887543 256789999999976654322111 22233333210 111223
Q ss_pred HHHHHHHHHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH-----hCCEEEEeccccCccccCCCccc-cc
Q 013235 239 YAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK-----AGGLCIADEVQAGFARTGSHFWG-FE 311 (447)
Q Consensus 239 ~~~~le~~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~-----~g~llI~DEv~tGfgr~G~~~~~-~~ 311 (447)
++++++.+.. ..+.+...++..| ++++|.+. +++.+++|.++|++ |++++|.||+|.+|-..+...-. +.
T Consensus 132 -~~~l~~~~~~~~~~~~~~~~~~~P-~NPTG~~~-s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~ 208 (388)
T PRK08637 132 -TDALKEALQAAYNKGKVIVILNFP-NNPTGYTP-TEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFA 208 (388)
T ss_pred -HHHHHHHHHhhccCCCEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHH
Confidence 5667666651 1122333333445 66666554 78889999999886 99999999999988655521101 11
Q ss_pred c-cCCCCCE--E---Eeecccc-CCcccccccc------CHHHHHhhcCCc----ccccCCCChHHHHHHHHHHHHHhhh
Q 013235 312 A-HGVVPDI--V---TMAKGIG-NGIPLGAVVT------TPEIAEVLTRRN----YFNTFGGNPVCTAAGHAVLKVIQKD 374 (447)
Q Consensus 312 ~-~gv~pDi--v---t~sK~lg-~G~pigav~~------~~~i~~~l~~~~----~~~T~~~np~a~aaala~L~~i~~~ 374 (447)
. .+..+.+ + ++||.++ .|+|+||++. ++++++.+.... ....++.|.++++++.+.|+ +.
T Consensus 209 ~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~---~~ 285 (388)
T PRK08637 209 ALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALN---SP 285 (388)
T ss_pred HhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhC---CH
Confidence 1 1223342 2 5899876 6999999984 367777665311 11334678888888877773 44
Q ss_pred hHHHHHHHHHHHHHHHHH---HHHHhcC---CeeeE-eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceee
Q 013235 375 KLQNNAHVVGSYLKERLT---ALKDKYG---IIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFF 444 (447)
Q Consensus 375 ~l~~~~~~~g~~l~~~L~---~l~~~~~---~i~~v-rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~ 444 (447)
.+.+++++....++++.. +..++++ .+.-. ...|+++++++.. ....++++.|+ ++||.+.
T Consensus 286 ~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~---------~~~~~l~~~l~~~~gv~~~ 354 (388)
T PRK08637 286 EFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG---------VDAEELRVHLLEKYGIGTI 354 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh---------HHHHHHHHHHhhhcceEEE
Confidence 555555555444544432 2232331 12222 3457888888731 12467888886 5798764
No 236
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.60 E-value=6.4e-13 Score=136.39 Aligned_cols=302 Identities=12% Similarity=0.051 Sum_probs=166.0
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHH-hcc--ccccccc--chHHHHH----HHHHHHhCCCCCceEEEcCCHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIK-RIQ--HSTVLYL--NHAIADF----AEALASKMPGNLKVVFFTNSGTE 169 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~-~~~--~~~~~~~--~~~~~el----ae~L~~~~~~~~~~v~~~~sGse 169 (447)
+.+|++.++.+. -+|+|.+|+.+.+. ... .....+. .+...++ .+.+++.++.....| +.+||++
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i-~~~sgt~ 98 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANV-QPHSGSQ 98 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceee-ecCCchH
Confidence 456787776653 47999999876642 221 1111111 1223333 336777776554444 4467999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
|+..+++.. ..+++.|++...+|.+......... ....+...+..|... ..+..| .+++++.+..
T Consensus 99 al~~~l~~l--~~~gd~Vl~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~-~~~~~d----~~~l~~~i~~ 163 (416)
T PRK00011 99 ANAAVYFAL--LKPGDTILGMDLAHGGHLTHGSPVN--------FSGKLYNVVSYGVDE-ETGLID----YDEVEKLALE 163 (416)
T ss_pred HHHHHHHHh--cCCCCEEEEeccccCCccccccccc--------cccceeeEeecCcCc-ccCCcC----HHHHHHHHHh
Confidence 999988755 2356788988888754321110000 000122222222110 012234 5677777753
Q ss_pred cCCCCeEEEEE-ccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE--Eeeccc
Q 013235 250 GTSGHVAGFLS-ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGI 326 (447)
Q Consensus 250 ~~~~~~aavi~-Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~l 326 (447)
. ++.++++ .++. |...+ +++|.++|+++|+++|+||+|. +|..+.... ....+ ..|++ +++|++
T Consensus 164 ~---~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~-~~~~~-~~di~~~S~~K~l 230 (416)
T PRK00011 164 H---KPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVH-PSPVP-HADVVTTTTHKTL 230 (416)
T ss_pred c---CCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCcc-CCCCC-CCcEEEecCCcCC
Confidence 2 3344555 4443 33333 8999999999999999999985 332220000 01122 35777 477998
Q ss_pred cCCccccccccC-HHHHHhhcCCcccccCCCC-hHHHHHH-HHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 013235 327 GNGIPLGAVVTT-PEIAEVLTRRNYFNTFGGN-PVCTAAG-HAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 327 g~G~pigav~~~-~~i~~~l~~~~~~~T~~~n-p~a~aaa-la~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
+|.+.|+++++ +++++.+.......+++.. ...+++. .+.++.+++ +++.++.+++.+++++.|+++ .+.+.
T Consensus 231 -~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 307 (416)
T PRK00011 231 -RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER--GFRVV 307 (416)
T ss_pred -CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCeee
Confidence 46778899985 6888877543222223222 2233332 333343332 346777888888888888774 22221
Q ss_pred eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 402 ~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
. -.....++.+.+.+.. ....++.+.|.++||.+..
T Consensus 308 ~-~~~~~~~~~i~~~~~~-------~~~~~~~~~L~~~GI~v~~ 343 (416)
T PRK00011 308 S-GGTDNHLVLVDLRSKG-------LTGKEAEAALEEANITVNK 343 (416)
T ss_pred e-cCCCCeEEEEeCcccC-------CCHHHHHHHHHHcCcEEcc
Confidence 1 0123466666663211 0134678888899999873
No 237
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.60 E-value=7.4e-14 Score=145.46 Aligned_cols=157 Identities=15% Similarity=0.170 Sum_probs=102.4
Q ss_pred ceEEEcCCHHHHHHHHHHHHH---hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCC
Q 013235 159 KVVFFTNSGTEANELAIMMAR---LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD 235 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar---~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d 235 (447)
++|+.++++++|+..++.... ...++++|++.+++|......+.... .++..++.+......|..|
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g-----------~~~~~v~v~~~~~~~f~~d 230 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPR-----------YDLEVVHINADEENEWQYP 230 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcC-----------CCeEEEEeecCcccCCCCC
Confidence 479999999999999987421 23467899999999987654432221 1333343332212234444
Q ss_pred hHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH--hCCEEEEeccccCccccCCCccccccc
Q 013235 236 GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAH 313 (447)
Q Consensus 236 ~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tGfgr~G~~~~~~~~~ 313 (447)
.+++++++. ++.-+.+|+.|. +++|.+. +++.+++|.++|++ +++++|.||||..|.. . +... .
T Consensus 231 ----~~~l~~~~~---~~tkai~l~nP~-NPTG~v~-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~--~~s~--~ 296 (527)
T PRK09275 231 ----DSELEKLRD---PSIKALFLVNPS-NPPSVAM-SDESLEKIADIVNEKRPDLMIITDDVYGTFVD-D--FRSL--F 296 (527)
T ss_pred ----HHHHHhhcC---CCCCEEEEeCCc-CCcCCCC-CHHHHHHHHHHHHhcCCCcEEEECCCChhhcc-c--ccCH--H
Confidence 456666543 323345556775 5556544 78999999999965 4999999999988742 1 1111 1
Q ss_pred CCCCC-EE---Eeecccc-CCccccccccCHH
Q 013235 314 GVVPD-IV---TMAKGIG-NGIPLGAVVTTPE 340 (447)
Q Consensus 314 gv~pD-iv---t~sK~lg-~G~pigav~~~~~ 340 (447)
...|+ ++ +|||.++ .|+++|+++++++
T Consensus 297 ~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 297 AVLPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred HhCCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 11232 22 6899998 7999999999886
No 238
>PRK07049 methionine gamma-lyase; Validated
Probab=99.59 E-value=1.5e-13 Score=141.19 Aligned_cols=241 Identities=15% Similarity=0.091 Sum_probs=154.6
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+|.++...+|+++|+++... +.+++++||++|+..++.... ..++.|++.++.|.+......... .
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~--~~Gd~Vv~~~p~Y~~~~~~~~~~l---------~ 144 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFV--RPGDVILHSQPLYGGTETLLAKTF---------R 144 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHh--CCCCEEEEcCCCcccHHHHHHHHH---------H
Confidence 567888889999999999853 457889999999988886443 256789999999987654321110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc-CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH------hC
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK------AG 288 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~-~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~------~g 288 (447)
..|+..+.+++. .| .+++++.+... ...++.+|++|..++++|.+.+ +++|.+++++ ++
T Consensus 145 ~~Gi~~v~~~~~------~d----~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~ 210 (427)
T PRK07049 145 NFGVGAVGFADG------LS----EAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGHR 210 (427)
T ss_pred hcCcEEEEEeCC------CC----HHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccCC
Confidence 113433333321 23 34455544321 1236788999988888888875 6666666666 89
Q ss_pred CEEEEeccccCccccCCCcccccccCCCCCEE--Eeecccc--CCccccccccCHHHHHhhcCCcccccCCCChHHHHHH
Q 013235 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIG--NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAG 364 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg--~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaa 364 (447)
+++|+||++.++.... ..+ ++ .||+ +++|.++ +|+++|++++++++++.+.........+.+|..+.++
T Consensus 211 ~~vvvDety~~~~~~~----pl~-~g--~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~ 283 (427)
T PRK07049 211 PIIACDNTLLGPVFQK----PLE-HG--ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWML 283 (427)
T ss_pred CEEEEECCccccccCC----ccc-cC--CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 9999999976542111 111 23 4777 5899999 4799999999999888776422222334678888887
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee--------------------EeecceeEEEEEe
Q 013235 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD--------------------VRGRGFLLGVEFV 416 (447)
Q Consensus 365 la~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--------------------vrg~Gl~~giel~ 416 (447)
+..|+.+.. .+++..+....+.+.|++ ++.+.. ..|.|-|+.|++.
T Consensus 284 ~r~L~tl~~--R~~~~~~~a~~la~~L~~----~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~ 349 (427)
T PRK07049 284 GRSLETLVL--RMERANRNARAVAEFLRD----HPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIK 349 (427)
T ss_pred HcCCChHHH--HHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEc
Confidence 777764421 233334445555555543 332222 2366889999995
No 239
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.59 E-value=3.3e-13 Score=135.49 Aligned_cols=250 Identities=14% Similarity=0.144 Sum_probs=151.8
Q ss_pred CCCCCHHHHHHHHHHHHhccccccc----c---cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh---c
Q 013235 113 CGHCHPYVVDSIVNQIKRIQHSTVL----Y---LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---T 182 (447)
Q Consensus 113 lGh~~p~v~~A~~~~l~~~~~~~~~----~---~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~---t 182 (447)
.|..++.|.+|+.+.+......... + ..+...+++++|++++..+.+.|+|++|+++|++.+++..... .
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~ 86 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQK 86 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccC
Confidence 3456899999998887542111111 0 1234578889999998766678999999999999999765432 2
Q ss_pred CCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEcc
Q 013235 183 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES 262 (447)
Q Consensus 183 ~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Ep 262 (447)
+++.|++. ...|........... ..|+.....|... .+..| .+++++.+. + ++.+|+++.
T Consensus 87 g~~~vi~~-~~~~~s~~~~~~~~~---------~~G~~v~~v~~~~--~~~~d----~~~l~~~l~---~-~~~lv~~~~ 146 (353)
T TIGR03235 87 GKKHIITS-AIEHPAVLEPIRALE---------RNGFTVTYLPVDE--SGRID----VDELADAIR---P-DTLLVSIMH 146 (353)
T ss_pred CCCeeeEc-ccccHHHHHHHHHHH---------hcCCEEEEEccCC--CCcCC----HHHHHHhCC---C-CCEEEEEEc
Confidence 22445544 444443322221110 0133222222211 11123 566776664 2 567888888
Q ss_pred ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHH
Q 013235 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPE 340 (447)
Q Consensus 263 i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~ 340 (447)
+++++|.+.+ +++|.++|+++|+++|+|++|. +|.. . ++.....+|+++++ |.+|. ..+|+++.+++
T Consensus 147 ~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~---~--~~~~~~~~D~~~~s~~K~~gp-~g~g~l~~~~~ 215 (353)
T TIGR03235 147 VNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI---T--VDLSADRIDLISCSGHKIYGP-KGIGALVIRKR 215 (353)
T ss_pred ccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc---c--ccccccCCCEEEeehhhcCCC-CceEEEEEccC
Confidence 8889999987 8999999999999999999996 4422 1 12222347999888 96431 23688888877
Q ss_pred HHHh--hcCCcc-------cccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHH
Q 013235 341 IAEV--LTRRNY-------FNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTA 393 (447)
Q Consensus 341 i~~~--l~~~~~-------~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~ 393 (447)
..+. +..... ......|+...++..++|+.+.+ ++..++.+++.++++++|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 279 (353)
T TIGR03235 216 GKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT 279 (353)
T ss_pred cccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc
Confidence 4322 111000 11223455556666677777643 34567777777777777755
No 240
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.58 E-value=7.5e-13 Score=135.18 Aligned_cols=302 Identities=16% Similarity=0.085 Sum_probs=165.2
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHH-Hhcc--cccc-ccc-chH---HHH-HHHHHHHhCCCCCceEEEcCCHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQ--HSTV-LYL-NHA---IAD-FAEALASKMPGNLKVVFFTNSGTE 169 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l-~~~~--~~~~-~~~-~~~---~~e-lae~L~~~~~~~~~~v~~~~sGse 169 (447)
+++|.+..+-.. -+|+|.+|+.+.+ .++. +... .|. .+. ..+ .++.+++.++.+...+ +.+||++
T Consensus 19 ~~~~~~~~~~~~-----~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v-~~~sgt~ 92 (402)
T cd00378 19 RETLELIASENF-----TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANV-QPHSGSQ 92 (402)
T ss_pred HhCeeeeccCCc-----CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceee-ecCCcHH
Confidence 567887766552 3799999998765 3331 1111 121 222 233 2334566776543334 4467999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe--EeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV--HHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~--~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
|+..+++... ..+++|++..+.|.+....... .. ....|. ..++.+... ..+..| .+++++.+
T Consensus 93 a~~~~l~~l~--~~Gd~Vl~~~~~~~~~~~~~~~-~~-------~~~~g~~~~~~~~~~~~-~~~~id----~~~l~~~i 157 (402)
T cd00378 93 ANLAVYFALL--EPGDTIMGLDLSHGGHLTHGSF-TK-------VSASGKLFESVPYGVDP-ETGLID----YDALEKMA 157 (402)
T ss_pred HHHHHHHHhc--CCCCEEEEecCccCcccccccc-cc-------ccccceeEEEecCCcCc-ccCCcC----HHHHHHHH
Confidence 9999988653 3567899988888554321100 00 000122 222221100 012234 56777777
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc-cCccccCCCcccccccCCCCCEE--Eeec
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ-AGFARTGSHFWGFEAHGVVPDIV--TMAK 324 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tGfgr~G~~~~~~~~~gv~pDiv--t~sK 324 (447)
... +....++..|..+ ...+ +++|.++|++||+++|+||+| .|+...|. .. .... ..|++ +++|
T Consensus 158 ~~~--~~~~v~~~~~~~~---~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~-~~--~~~~-~~dv~~~s~sK 224 (402)
T cd00378 158 LEF--KPKLIVAGASAYP---RPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGV-FP--NPLP-GADVVTTTTHK 224 (402)
T ss_pred HhC--CCCEEEecCcccC---CCcC----HHHHHHHHHhcCCEEEEEccchhhhhhccc-CC--Cccc-CCcEEEecccc
Confidence 532 1223444466443 3323 899999999999999999996 44422331 11 1111 35776 5789
Q ss_pred cccCCccccccccCH-HHHHhhcCCcccccCCCC-hHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHHhcC
Q 013235 325 GIGNGIPLGAVVTTP-EIAEVLTRRNYFNTFGGN-PVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKYG 399 (447)
Q Consensus 325 ~lg~G~pigav~~~~-~i~~~l~~~~~~~T~~~n-p~a~aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~ 399 (447)
.+ +|.+.|++++++ ++++.+........++.. +...+++..++..+.+ +++.+++.++.+++.+.|.++ .+.
T Consensus 225 ~l-~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 301 (402)
T cd00378 225 TL-RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER--GFK 301 (402)
T ss_pred CC-CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC--CCe
Confidence 99 667889999877 888777543222223322 2233332333443322 345666777777777777664 222
Q ss_pred CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 400 IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 400 ~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
... -...+.++++.+.+... ...++.+.|.++||++..
T Consensus 302 ~~~-~~~~~~~v~v~~~~~~~-------~~~~~~~~l~~~gI~v~~ 339 (402)
T cd00378 302 VVS-GGTDNHLVLVDLRPKGI-------TGKAAEDALEEAGITVNK 339 (402)
T ss_pred Eee-cCCCCeEEEEeCCccCC-------CHHHHHHHHHHcCcEEcC
Confidence 221 11347777787742210 123566678889999963
No 241
>PLN02242 methionine gamma-lyase
Probab=99.58 E-value=1.6e-13 Score=140.46 Aligned_cols=255 Identities=16% Similarity=0.147 Sum_probs=158.5
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.. .+.+++++||++|+..++.... ..++.|++..+.|.+... .+.... ..
T Consensus 71 ~r~~~Pt~~~LE~~lA~l~g--~~~~l~~~sG~~Ai~~al~al~--~~GD~Vl~~~~~Y~~~~~-~~~~~~-------~~ 138 (418)
T PLN02242 71 SRHFNPTVLNLGRQMAALEG--TEAAYCTASGMSAISSVLLQLC--SSGGHVVASNTLYGGTHA-LLAHFL-------PR 138 (418)
T ss_pred cCCCChhHHHHHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHh--CCCCEEEEcCCcHHHHHH-HHHHhh-------hh
Confidence 44568899999999999984 4567889999999999997543 256788888887743322 111000 00
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. ++++.+|++|..++++|.+.+ +++|.++|+++|+++|+||
T Consensus 139 ~~G~~~~~~d~-------~d----~e~l~~~i~---~~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDe 200 (418)
T PLN02242 139 KCNITTTFVDI-------TD----LEAVKKAVV---PGKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDN 200 (418)
T ss_pred ccCceEEEcCC-------CC----HHHHHHhcC---cCCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEEC
Confidence 01222221111 12 566776664 224778999988888888875 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEE--EeeccccC-Ccc-ccccccCHHHHHhhcCCccc--ccCCCChHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIP-LGAVVTTPEIAEVLTRRNYF--NTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~p-igav~~~~~i~~~l~~~~~~--~T~~~np~a~aaala~L~ 369 (447)
+|+.+. .+ ...+| .||+ +++|.+++ |.+ .|++++++++++.+...... ..++..+....+++..+.
T Consensus 201 a~~~~~-~~-----~~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~ 272 (418)
T PLN02242 201 TFAPMV-LS-----PARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSER 272 (418)
T ss_pred CCCccC-CC-----HHHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC
Confidence 996442 22 11233 4666 58899985 666 58899999988877643221 223333444444444332
Q ss_pred HHhh-hhHHHHHHHHHHHHHHHHHHHHHh--cCCe----------eeE---eecceeEEEEEeeCCCCCCCCHHHHHHHH
Q 013235 370 VIQK-DKLQNNAHVVGSYLKERLTALKDK--YGII----------GDV---RGRGFLLGVEFVTDRQLKTPAKAETLYIM 433 (447)
Q Consensus 370 ~i~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~i----------~~v---rg~Gl~~giel~~~~~~~~p~~~~~~~~~ 433 (447)
++. +..+++.+++..++.+.|++...+ ||.. ... .|.|-|+.|++.. .+.+.+|+
T Consensus 273 -l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~--------~~~~~~f~ 343 (418)
T PLN02242 273 -LPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT--------EERANRLM 343 (418)
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC--------HHHHHHHH
Confidence 111 223455666777777777765211 1110 012 3778999999941 13355666
Q ss_pred HHHH
Q 013235 434 DKMK 437 (447)
Q Consensus 434 ~~l~ 437 (447)
+.+.
T Consensus 344 ~~l~ 347 (418)
T PLN02242 344 RYLQ 347 (418)
T ss_pred HHhh
Confidence 6654
No 242
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.58 E-value=1.1e-12 Score=132.47 Aligned_cols=285 Identities=14% Similarity=0.075 Sum_probs=167.6
Q ss_pred CCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCC--ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~--~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~ 193 (447)
..|.+.+|+.+.. .|....|. ....++.++|++++.... +.+++++||+++++.++.... ..++++++...+
T Consensus 16 ~~~~~~~a~~~~~---~~~~~~~~-~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--~~~~~vlv~~~~ 89 (368)
T PRK13479 16 TSRTVREAMLRDW---GSWDDDFN-ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--PRDGKVLVPDNG 89 (368)
T ss_pred CCHHHHHHhCCCC---CCCChHHH-HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--CCCCeEEEEeCC
Confidence 5677777766543 22222233 467889999999887542 568899999999999997553 255678777777
Q ss_pred cccCch-hhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeC
Q 013235 194 YHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (447)
Q Consensus 194 yHG~~~-~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~ 272 (447)
|+|... ......+ ..+..++.+.. +..| .+++++.+... + ++..+.+-.+.+.+|.+.+
T Consensus 90 ~~~~~~~~~~~~~g----------~~~~~i~~~~~----~~~d----~~~l~~~l~~~-~-~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 90 AYGARIAQIAEYLG----------IAHVVLDTGED----EPPD----AAEVEAALAAD-P-RITHVALVHCETTTGILNP 149 (368)
T ss_pred chHHHHHHHHHHcC----------CcEEEEECCCC----CCCC----HHHHHHHHHhC-C-CCcEEEEEcccCccccccC
Confidence 766531 1111111 12333332211 1133 56677776532 2 3444444445566777776
Q ss_pred CCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccCCccccccccCHHHHHhhcCCcc
Q 013235 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNGIPLGAVVTTPEIAEVLTRRNY 350 (447)
Q Consensus 273 ~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~pigav~~~~~i~~~l~~~~~ 350 (447)
+++|.++|+++|+++|+|.+| .||... .... ...+|+++ +.|.+.+...+|++++++++++.+.....
T Consensus 150 ----~~~i~~l~~~~~~~livDa~~-~~g~~~---~~~~--~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~ 219 (368)
T PRK13479 150 ----LDEIAAVAKRHGKRLIVDAMS-SFGAIP---IDIA--ELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSR 219 (368)
T ss_pred ----HHHHHHHHHHcCCEEEEEccc-ccCCcc---cccc--ccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCC
Confidence 899999999999999999877 465321 1222 23468775 56988654446999999998877654211
Q ss_pred -----------------cccCCCChHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHhcCCeee--Eeec
Q 013235 351 -----------------FNTFGGNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIGD--VRGR 407 (447)
Q Consensus 351 -----------------~~T~~~np~a~aaala~L~~i~~~----~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrg~ 407 (447)
...|+.|....++..++|+.+.++ +..+++.+..+++++.|+++ .+..+.. .+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~- 296 (368)
T PRK13479 220 SLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL--GFEPLLDAEIQS- 296 (368)
T ss_pred CeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCcccCCchhcC-
Confidence 111345656666667778776443 33455566666666666554 2221111 111
Q ss_pred ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 408 Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.....+.+...+ + ....++.+.|.++||++.+
T Consensus 297 ~~~~~~~~~~~~----~--~~~~~l~~~L~~~gi~v~~ 328 (368)
T PRK13479 297 PIIVTFHAPADP----A--YDFKEFYERLKEQGFVIYP 328 (368)
T ss_pred ceEEEEECCCCC----C--cCHHHHHHHHHHCCEEEec
Confidence 122233221110 0 1135788999999999964
No 243
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=4.6e-14 Score=136.17 Aligned_cols=316 Identities=16% Similarity=0.085 Sum_probs=205.5
Q ss_pred EEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCCCCCc
Q 013235 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLK 159 (447)
Q Consensus 85 ~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~~~~~ 159 (447)
+....+.++ ..||+.+++|.+..... |+ .++++.+.+...+++++.++. .+..+.+.+|.+.|++.++ .+
T Consensus 81 ~e~~~~~~~-~i~G~~~~N~aS~NfL~-l~-~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--~E 155 (467)
T KOG1358|consen 81 LESVMLPHV-TIDGKDVLNFASANFLG-LI-ENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--TE 155 (467)
T ss_pred cccccCCce-EecCceeecccchhhhh-hc-ccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--Cc
Confidence 444444454 48999999998765533 33 478999999999999865432 3346778899999999995 44
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHH
Q 013235 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~ 239 (447)
..++.+-|..+++.++. ++.++.+|+..+-.-+-...-.+.++......|.+ +|
T Consensus 156 ~aivYs~gF~ti~S~ip---afsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------------------nd---- 209 (467)
T KOG1358|consen 156 DAIVYSYGFSTIESAIP---AFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------------------ND---- 209 (467)
T ss_pred ceeeeccccchhhhcch---hhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------------------CC----
Confidence 55677888899998887 56688899988877765555555555443322221 34
Q ss_pred HHHHHHHHHc------cCCC---CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC-ccc
Q 013235 240 AKDVQDLIDF------GTSG---HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWG 309 (447)
Q Consensus 240 ~~~le~~i~~------~~~~---~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~-~~~ 309 (447)
++++|+++.+ ..++ ....+++|.+.-+.|.+.| +.+|.++..||...+|+||..+ ||-.|+. ...
T Consensus 210 m~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg~~GrGv 284 (467)
T KOG1358|consen 210 MEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLGKTGRGV 284 (467)
T ss_pred HHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccc-cccccccCccc
Confidence 4455544422 1122 2568899999999999998 9999999999999999999976 5444421 223
Q ss_pred ccccCCC---CCEEE--eeccccC-CccccccccCHHHHHhhcCCcccccC--CCChHHHHHHHHHHHHHhhh-hHHHHH
Q 013235 310 FEAHGVV---PDIVT--MAKGIGN-GIPLGAVVTTPEIAEVLTRRNYFNTF--GGNPVCTAAGHAVLKVIQKD-KLQNNA 380 (447)
Q Consensus 310 ~~~~gv~---pDivt--~sK~lg~-G~pigav~~~~~i~~~l~~~~~~~T~--~~np~a~aaala~L~~i~~~-~l~~~~ 380 (447)
.+|+++. .|+++ |.-+++. | |.++++.-+++.-.-...++-| +..|....+|..++++++++ +..+.+
T Consensus 285 teH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L 361 (467)
T KOG1358|consen 285 TEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPL 361 (467)
T ss_pred cccCCCCccceeeeeecccccccccC---ceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhh
Confidence 4888884 46776 4455552 2 3466655554432212223334 45688888899999988653 556666
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeeEeec--ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 381 HVVGSYLKERLTALKDKYGIIGDVRGR--GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 381 ~~~g~~l~~~L~~l~~~~~~i~~vrg~--Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+.....+...|... .. ..+.|. ..++.+.+.....++..+....+++++.|+.+|+++.
T Consensus 362 ~~k~~~~H~~l~~~-s~----~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~ 422 (467)
T KOG1358|consen 362 RAKVAKFHAALSSN-SG----FIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLT 422 (467)
T ss_pred hccccccchhhhcC-Cc----eEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceeh
Confidence 66666666666552 11 123332 4455566654333332333356789999988898875
No 244
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.57 E-value=1.6e-12 Score=133.86 Aligned_cols=302 Identities=15% Similarity=0.103 Sum_probs=177.8
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhccc---cccccc----chHHHHHHHHHHHhCCCC-CceEEEcCCHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH---STVLYL----NHAIADFAEALASKMPGN-LKVVFFTNSGTE 169 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~---~~~~~~----~~~~~elae~L~~~~~~~-~~~v~~~~sGse 169 (447)
+..|||..+ .|-.++.|.+++.+.+..... ....+. .....++.+.|++++... .++|+|++++++
T Consensus 32 ~~iyLd~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAA------TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 347888632 244567899998887755421 111111 233568888999998764 468999999999
Q ss_pred HHHHHHHHHH--hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 170 ANELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 170 A~e~Aik~ar--~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
++..+++... ...+++.|++....|++.......+.. ..|+.....|.... ...| .+++++.+
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~---------~~g~~v~~v~~~~~--~~~~----~~~l~~~i 170 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQ---------KTGAVLKFVGLTPD--EVLD----VEQLKELL 170 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHH---------HcCCEEEEEecCCC--CCcC----HHHHHHHh
Confidence 9999887421 234557888888777654322111100 01222222111110 1123 56677666
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eecc
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKG 325 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~ 325 (447)
.. ++.+|++.-+++.+|.+.+ +++|.++|+++|+++|+|++|. +|... ++.....+|+++ +.|.
T Consensus 171 ~~----~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~~-----~~~~~~~~d~~~~s~~K~ 236 (424)
T PLN02855 171 SE----KTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHMP-----VDVQTLGADFLVASSHKM 236 (424)
T ss_pred cc----CceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCcC-----CCchhcCCCEEEeecccc
Confidence 42 5677888888888999887 8999999999999999999994 44221 122223468885 5694
Q ss_pred ccCCccccccccCHHHHHhhcCCccc--------------------ccCC-CChHHHHHHHHHHHHHhhh---hHHHHHH
Q 013235 326 IGNGIPLGAVVTTPEIAEVLTRRNYF--------------------NTFG-GNPVCTAAGHAVLKVIQKD---KLQNNAH 381 (447)
Q Consensus 326 lg~G~pigav~~~~~i~~~l~~~~~~--------------------~T~~-~np~a~aaala~L~~i~~~---~l~~~~~ 381 (447)
+| .-.+|++++++++++.+.....+ ...+ .|..+.++..++|+.+.+. +..++.+
T Consensus 237 ~g-p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 237 CG-PTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred cC-CCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 43 22479999999887766431000 0111 2344555555677776553 3456666
Q ss_pred HHHHHHHHHHHHHHHhcCCeee----EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-Cceeec
Q 013235 382 VVGSYLKERLTALKDKYGIIGD----VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-CALFFS 445 (447)
Q Consensus 382 ~~g~~l~~~L~~l~~~~~~i~~----vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~ 445 (447)
++.+++++.|+++. ...+.+. ...++.++.+.+... ...++.+.|.++ ||.++.
T Consensus 316 ~l~~~l~~~L~~~~-g~~i~~~~~~~~~~r~~~v~~~~~~~---------~~~~v~~~L~~~~gI~v~~ 374 (424)
T PLN02855 316 ELGTYLYEKLSSVP-GVRIYGPKPSEGVGRAALCAFNVEGI---------HPTDLSTFLDQQHGVAIRS 374 (424)
T ss_pred HHHHHHHHHHhcCC-CEEEeCCCcccccCcccEEEEEECCc---------CHHHHHHHhcccCCEEEec
Confidence 66777766665531 1111211 112345666665211 134688888887 998764
No 245
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.56 E-value=2.4e-13 Score=141.44 Aligned_cols=202 Identities=12% Similarity=0.100 Sum_probs=117.8
Q ss_pred CCCCHHHHHHHHHHHHhcccccccccchHHHHHHH-HHHHhCC---CCCc--eEEEcCCHHHHHHHHHHHHH---hhcCC
Q 013235 114 GHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAE-ALASKMP---GNLK--VVFFTNSGTEANELAIMMAR---LYTGC 184 (447)
Q Consensus 114 Gh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae-~L~~~~~---~~~~--~v~~~~sGseA~e~Aik~ar---~~t~~ 184 (447)
|...|+++.++.+.+....+.......+...++++ .+.+.+. ...+ +|++++++++|+..++.... ...++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pG 184 (521)
T TIGR03801 105 GFDPDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKG 184 (521)
T ss_pred CCCCCHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCC
Confidence 34556777777776532222111111223333332 2233222 1222 79999999999999887421 23467
Q ss_pred CeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCC-----CCCChHHHHHHHHHHHHccCCCCeEEEE
Q 013235 185 NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGV-----FGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (447)
Q Consensus 185 ~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~-----~~~d~~~~~~~le~~i~~~~~~~~aavi 259 (447)
++|++..++|......+.... .++..++.+...... |..| .+++++++. ++..+.+|
T Consensus 185 D~Vlv~~P~y~~y~~~~~l~~-----------~g~~vv~i~~~~~~~~g~~~~~~d----~~~l~~~~~---~~~kai~l 246 (521)
T TIGR03801 185 DKIALMTPIFTPYLEIPELPR-----------YDFEVVRIKADEMTEDGTHTWQYP----DKELEKLRD---PSIKALFV 246 (521)
T ss_pred CEEEEeCCCcHHHHHHHHHhc-----------CCcEEEEeecccccccccccCCCC----HHHHHHhcC---CCCcEEEE
Confidence 899999999976554322111 123333222211111 4444 455665543 32334555
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHHh--CCEEEEeccccCccccCCCcccccccCCCCC-EE---Eeecccc-CCccc
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKKA--GGLCIADEVQAGFARTGSHFWGFEAHGVVPD-IV---TMAKGIG-NGIPL 332 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD-iv---t~sK~lg-~G~pi 332 (447)
+.|. +++|.+ .+++.+++|.++|++| ++++|.||||..|.. .+-.. ....|| ++ +|||.++ .|+++
T Consensus 247 ~nP~-NPTG~v-ls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl--~~~~~~~vI~v~SfSK~fg~~G~Rl 319 (521)
T TIGR03801 247 VNPS-NPPSVA-MSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSL--FAELPYNTIGVYSFSKYFGATGWRL 319 (521)
T ss_pred eCCC-CCCCCC-CCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccch--hhhCCCCEEEEEcchhhccCchhhh
Confidence 7776 455554 4788999999999987 999999999987742 11111 112343 33 5999998 79999
Q ss_pred cccccCHH
Q 013235 333 GAVVTTPE 340 (447)
Q Consensus 333 gav~~~~~ 340 (447)
|+++++++
T Consensus 320 G~i~~~~~ 327 (521)
T TIGR03801 320 GTIALHKD 327 (521)
T ss_pred hhhhcCch
Confidence 99999864
No 246
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.56 E-value=5.9e-13 Score=136.01 Aligned_cols=289 Identities=13% Similarity=0.080 Sum_probs=173.7
Q ss_pred CCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~y 194 (447)
-+++|.+|+.+.+ ..|... .....+.+++++|++++..+. +.+++++||+++++.++... ..++++|++.+.+|
T Consensus 20 ~~~~V~~a~~~~~--~~~~~~-~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~--~~~Gd~Vlv~~~~~ 94 (401)
T PLN02409 20 IPERVLRAMNRPN--EDHRSP-AFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT--LSPGDKVVSFRIGQ 94 (401)
T ss_pred CCHHHHHHhcCCC--CCCCCH-HHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc--CCCCCEEEEeCCCc
Confidence 4577777765432 123221 224566778888888876543 57899999999999998643 34668899999887
Q ss_pred ccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCC
Q 013235 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAP 274 (447)
Q Consensus 195 HG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~ 274 (447)
++.....+ +.. . ...+..++.+. ... .| .+++++.+......++.+|++..+.+.+|.+.+
T Consensus 95 ~~~~~~~~-~~~-----~---g~~v~~v~~~~--~~~--~~----~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~-- 155 (401)
T PLN02409 95 FSLLWIDQ-MQR-----L---NFDVDVVESPW--GQG--AD----LDILKSKLRQDTNHKIKAVCVVHNETSTGVTND-- 155 (401)
T ss_pred hhHHHHHH-HHH-----c---CCceEEEECCC--CCC--CC----HHHHHHHHhhCcCCCccEEEEEeecccccccCC--
Confidence 65432111 000 0 01223333221 111 12 567777776421125677777777778888887
Q ss_pred ChHHHHHHH--HHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEe--eccccCCccccccccCHHHHHhhcCCc-
Q 013235 275 GYLPAVYKS--IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGNGIPLGAVVTTPEIAEVLTRRN- 349 (447)
Q Consensus 275 ~~l~~l~~l--~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~--sK~lg~G~pigav~~~~~i~~~l~~~~- 349 (447)
+++|.++ |+++|+++|+|++|+ +|. .-...+.+ ..|+++. .|.+++...+|+++.+++.++.+....
T Consensus 156 --~~~i~~l~~~~~~g~~~vvD~v~s-~g~---~~id~~~~--~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~ 227 (401)
T PLN02409 156 --LAGVRKLLDCAQHPALLLVDGVSS-IGA---LDFRMDEW--GVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKS 227 (401)
T ss_pred --HHHHHHHHhhhccCcEEEEEcccc-cCC---cccccccc--CccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCC
Confidence 8999999 999999999999996 431 11112223 4577754 599986556899999999887765311
Q ss_pred ---c-----------cc---cCCCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCeeeE-ee-c
Q 013235 350 ---Y-----------FN---TFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDV-RG-R 407 (447)
Q Consensus 350 ---~-----------~~---T~~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg-~ 407 (447)
. .. .+..|.....+..++|+.+.+. +..++.+++.+++++.|+++ .+.++..- .. .
T Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~--g~~~~~~~~~~~s 305 (401)
T PLN02409 228 PRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW--GLKLCTKKPEWRS 305 (401)
T ss_pred CCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhcc
Confidence 0 01 2233445566777888887653 45677777888888877665 23333211 11 1
Q ss_pred ceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCceeecc
Q 013235 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALFFSQ 446 (447)
Q Consensus 408 Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv~~~ 446 (447)
+.+..+.+.+. ....++.+.|+ +.||.+..+
T Consensus 306 ~~v~~~~~p~~--------~~~~~l~~~l~~~~~i~i~~G 337 (401)
T PLN02409 306 DTVTAVVVPEG--------IDSAEIVKNAWKKYNLSLGLG 337 (401)
T ss_pred cceEEEeCCCC--------CCHHHHHHHHHHhCCEEEEcC
Confidence 23344443211 11345766665 569888743
No 247
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.56 E-value=2e-12 Score=130.74 Aligned_cols=291 Identities=17% Similarity=0.201 Sum_probs=188.7
Q ss_pred CCCCCHHHHHHHHHHHHhcccc---c-c---cccchHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHHHHHh-hcC
Q 013235 113 CGHCHPYVVDSIVNQIKRIQHS---T-V---LYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARL-YTG 183 (447)
Q Consensus 113 lGh~~p~v~~A~~~~l~~~~~~---~-~---~~~~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik~ar~-~t~ 183 (447)
.|..++.|.+++.+.+...... . . ....+...+..+.|++.++.+. +.|+|++|++++++.++...+. ..+
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccc
Confidence 3557899999999987754211 1 1 1124556788889999988776 7899999999999999987743 457
Q ss_pred CCeEEEEcCCcccCchhhhhccCCCCccccccCCC--eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEc
Q 013235 184 CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG--VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSE 261 (447)
Q Consensus 184 ~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g--~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~E 261 (447)
+++|++....|++.......... ..| +..++.+ ..+. .| .+++++.+. .++..|++.
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~i~~~--~~~~--~~----~~~~~~~l~----~~~~lv~~~ 146 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAK---------RKGAEVRVIPAD--PGGS--LD----LEDLEEALN----PDTRLVSIS 146 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHH---------HTTEEEEEEEEG--TTSS--CS----HHHHHHHHH----TTESEEEEE
T ss_pred ccccccccccccccccccccccc---------cchhhhcccccc--ccch--hh----hhhhhhhhc----cccceEEee
Confidence 78999999998876632222210 012 2223221 1111 13 567777775 377888888
Q ss_pred cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCH
Q 013235 262 SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTP 339 (447)
Q Consensus 262 pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~ 339 (447)
-+.+..|...| +++|.++|+++|+++|+|=+|+ +|..- ++.....+|++++| | ++|+.-+|.+..++
T Consensus 147 ~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~~-----id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~ 215 (371)
T PF00266_consen 147 HVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCVP-----IDLDELGADFLVFSSHK-LGGPPGLGFLYVRP 215 (371)
T ss_dssp SBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTSS-------TTTTTESEEEEESTS-TTSSSTEEEEEEEH
T ss_pred cccccccEEee----eceehhhhhccCCceeEechhc-ccccc-----ccccccccceeeecccc-cCCCCchhhheehh
Confidence 89889999888 9999999999999999999996 54321 23333457999877 9 88766689999999
Q ss_pred HHHHhhcCCcccc------------------cC---CCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHH
Q 013235 340 EIAEVLTRRNYFN------------------TF---GGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALK 395 (447)
Q Consensus 340 ~i~~~l~~~~~~~------------------T~---~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~ 395 (447)
+..+.+.+..... -| .-|.....+..++|+.+++. +..++..++.+++++.|.++.
T Consensus 216 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~ 295 (371)
T PF00266_consen 216 EAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELP 295 (371)
T ss_dssp HHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCC
Confidence 9988884321110 11 13455555666788877543 345666677777777776652
Q ss_pred HhcCCee--eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 396 DKYGIIG--DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 396 ~~~~~i~--~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
. ...++ +-.-.+.++.+.+... ....+.+.|.++||.++.
T Consensus 296 ~-~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~L~~~~I~~~~ 337 (371)
T PF00266_consen 296 G-IEVLGPDDEPRRPSIVSFNLPGS---------DADDVVKYLEERGIAVST 337 (371)
T ss_dssp T-EEESSSSCGGBGTTEEEEEETTS---------SHHHHHHHHHHHTEEEEE
T ss_pred c-eeEeeecccccccceEEEeecCC---------CHHHHHHHHhhcCEEEec
Confidence 1 01111 1233466677777221 136788889888998875
No 248
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.55 E-value=1.8e-12 Score=131.51 Aligned_cols=295 Identities=16% Similarity=0.070 Sum_probs=162.2
Q ss_pred EEEecCCcccccCCCCCHHHHHHHHHHHHhcc---cccccccchHHHHHHHHHH---HhCCC-CCceEEEcCCHHHHHHH
Q 013235 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALA---SKMPG-NLKVVFFTNSGTEANEL 173 (447)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~---~~~~~~~~~~~~elae~L~---~~~~~-~~~~v~~~~sGseA~e~ 173 (447)
|+|..++- ..++.|.+++.+.+.... +....|......++.+.++ +.++. ..++|+|++|++|++..
T Consensus 2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 66755433 367899999988776531 2222233333344444443 34433 35789999999999999
Q ss_pred HHHHHHh----hcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 174 AIMMARL----YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 174 Aik~ar~----~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
+++.... ..+++.|++....|+........+... ...+..++... . +..| .+++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~--------G~~v~~v~~~~--~--g~~d----~~~l~~~i~~ 139 (382)
T TIGR03403 76 VLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESL--------GVEVTYLPINE--Q--GTIT----AEQVREAITE 139 (382)
T ss_pred HHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHC--------CCEEEEEecCC--C--CCCC----HHHHHHhccc
Confidence 9985521 123456776654443322221111000 01222333211 1 1123 4667766642
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--cccc
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG 327 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg 327 (447)
++.++++..+++++|.+.+ +++|.++|+++|+++|+|++|. +|.. . ++.....+|+++++ |-+|
T Consensus 140 ----~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~---~--~~~~~~~~D~~~~s~~K~~g 205 (382)
T TIGR03403 140 ----KTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI---P--VDVQKAGVDFLSFSAHKFHG 205 (382)
T ss_pred ----CCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC---c--cCccccCCCEEEEcchhhCC
Confidence 4567778778888999887 8999999999999999999986 4321 1 22223347999888 9543
Q ss_pred CCccccccccCHHHH--HhhcCCc---ccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 013235 328 NGIPLGAVVTTPEIA--EVLTRRN---YFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGI 400 (447)
Q Consensus 328 ~G~pigav~~~~~i~--~~l~~~~---~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~ 400 (447)
. .-+|++..+++.. ..+.... ....+..|..+..++.++|+.+++ +...++.+++.++|+++|.++ +.
T Consensus 206 p-~G~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~----~~ 280 (382)
T TIGR03403 206 P-KGVGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL----PD 280 (382)
T ss_pred C-CceEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence 1 1156666554431 1110000 012344567777677777876644 223345555555555555443 32
Q ss_pred eeeEee----cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 401 IGDVRG----RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 401 i~~vrg----~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
+.-+.. ...++.+.+.. . ....+.+.|.++||.++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~L~~~gI~v~~ 320 (382)
T TIGR03403 281 VFVVGDREHRVPNTILISIKG------V---EGEAMLWDLNKAGIAAST 320 (382)
T ss_pred EEEECCCCCCcCCEEEEEeCC------C---CHHHHHHhhccCCEEEEc
Confidence 222211 12344454421 0 134566778899999984
No 249
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.55 E-value=1.8e-12 Score=132.65 Aligned_cols=302 Identities=16% Similarity=0.109 Sum_probs=169.7
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccc--cc----cchHHHHHHHHHHHhCCCCCceEEEcCCHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV--LY----LNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~--~~----~~~~~~elae~L~~~~~~~~~~v~~~~sGseA 170 (447)
++..|||-.+ +|-.++.|.+|+.+.++....... .+ ......+..+++ +.++...++|+|++|+|++
T Consensus 26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~ 98 (406)
T TIGR01814 26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTIN 98 (406)
T ss_pred CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHH
Confidence 3457777433 233578888998877765421111 01 111222333445 6676666789999999999
Q ss_pred HHHHHHHHHhhcCCC-eEEEEcCCcccCchhhhhccCCCCccccccCCCeE------eecCCCCcCCCCCCChHHHHHHH
Q 013235 171 NELAIMMARLYTGCN-DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH------HALNPDPYRGVFGADGEMYAKDV 243 (447)
Q Consensus 171 ~e~Aik~ar~~t~~~-~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~------~~~~p~~~~~~~~~d~~~~~~~l 243 (447)
+..+++......+++ .|++.+..|............ ..|+. .++... .+..| .+++
T Consensus 99 l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~---------~~g~~~~~~~~~~~~~~----~g~~~----~~~l 161 (406)
T TIGR01814 99 LHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQ---------LHGLTVEESMVQIEPRE----EETLR----LEDI 161 (406)
T ss_pred HHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHH---------hcCCCcccceEEeccCC----CCccC----HHHH
Confidence 999887542111122 455544555432221111000 00111 111110 01112 4566
Q ss_pred HHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEe-
Q 013235 244 QDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM- 322 (447)
Q Consensus 244 e~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~- 322 (447)
++.++.. .+++++|+++.+++.+|.+.+ +++|.++|+++|+++|+|++|+ +|.. .+..+.+| +|++++
T Consensus 162 ~~~~~~~-~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~---~id~~~~g--vD~~~~s 230 (406)
T TIGR01814 162 LDTIEKN-GDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV---PLDLHDWG--VDFACWC 230 (406)
T ss_pred HHHHHhc-CCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc---ccccccCC--CCEEEEc
Confidence 6666543 237889999999999999998 9999999999999999999997 4432 12233334 577765
Q ss_pred -eccccCCccccccccCHHHHHhhcCCc---cc----------cc---------CC-CChHHHHHHHHHHHHHhhh---h
Q 013235 323 -AKGIGNGIPLGAVVTTPEIAEVLTRRN---YF----------NT---------FG-GNPVCTAAGHAVLKVIQKD---K 375 (447)
Q Consensus 323 -sK~lg~G~pigav~~~~~i~~~l~~~~---~~----------~T---------~~-~np~a~aaala~L~~i~~~---~ 375 (447)
-|.|.+|.. |++...++..+.+.... +. .+ .+ -|..++++..++|+.+++. .
T Consensus 231 ~hK~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~ 309 (406)
T TIGR01814 231 TYKYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEA 309 (406)
T ss_pred CccccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHH
Confidence 498876533 33344333332232210 00 01 11 2446677777799988653 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---hcCCee--eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 376 LQNNAHVVGSYLKERLTALKD---KYGIIG--DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 376 l~~~~~~~g~~l~~~L~~l~~---~~~~i~--~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
..++.+++.+++++.|+++.. ...+.+ +.+.++.++.+.+. . ....+.+.|.++||++.
T Consensus 310 i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~---------~~~~~~~~L~~~gi~v~ 373 (406)
T TIGR01814 310 LRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V---------PGKAVFQALIKRGVIGD 373 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C---------CHHHHHHHHHHCCEEEe
Confidence 566777777777777766421 111111 22234556666652 0 13568888999999874
No 250
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.55 E-value=4.1e-13 Score=136.41 Aligned_cols=254 Identities=17% Similarity=0.128 Sum_probs=157.4
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+|.++...+|+++|+++.+. +..++++||+.|+..++.... ..++.||+..+.| +.+.........
T Consensus 56 ~r~~~pt~~~Le~~lA~l~G~--~~al~~~sG~~Ai~~~l~al~--~~Gd~Vv~~~~~y-~~~~~~~~~~~~-------- 122 (386)
T PRK06767 56 SRLGNPTVKLFEERMAVLEGG--EEALAFGSGMAAISATLIGFL--KAGDHIICSNGLY-GCTYGFLEVLEE-------- 122 (386)
T ss_pred cCCCCcchHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEcCCcH-HHHHHHHHHHHh--------
Confidence 456778888999999999864 456788999999988875432 3557777777655 444333221110
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..++.....+. .| .+++++.+. + ++.+|++|..++++|.+.+ +++|.++|+++|+++|+||
T Consensus 123 ~~gi~~~~~~~-------~d----~~~l~~~i~---~-~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~ 183 (386)
T PRK06767 123 KFMITHSFCDM-------ET----EADIENKIR---P-NTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDN 183 (386)
T ss_pred hcCeEEEEeCC-------CC----HHHHHHhhC---c-CceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEEC
Confidence 01222111100 12 456666654 2 5678888888888888876 8999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-Cccc-cccccCHHHHHhhcCCcccccCC--CChHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNTFG--GNPVCTAAGHAVLK 369 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-gav~~~~~i~~~l~~~~~~~T~~--~np~a~aaala~L~ 369 (447)
++. .+..+ .. . .+| .|+++ ++|.+++ |.++ |+++++++.++.+.... ...++ .+|+.+++++..|+
T Consensus 184 a~a-~~~~~-~p--l-~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~-~~~~g~~~~~~~a~l~~~~L~ 255 (386)
T PRK06767 184 TFC-SPYLQ-RP--L-ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPM-RKDIGGIMAPFDAWLLLRGLK 255 (386)
T ss_pred CCc-ccccC-Cc--h-hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHH-HHHhCCCCCHHHHHHHHcCCC
Confidence 985 22222 11 1 123 47775 5699986 6775 88888988776543211 11122 25776666666665
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE------------eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH
Q 013235 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV------------RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~ 437 (447)
.+. ...++.+++..++.+.|++ ++.+..| +|.|-|+.+++..+ .+.+.++.+.|.
T Consensus 256 tl~--~r~~~~~~~a~~la~~L~~----~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~-------~~~~~~f~~~l~ 322 (386)
T PRK06767 256 TLA--VRMDRHCDNAEKIVSFLKN----HDAVEGVWYPEGELASRQMKRGGGVISFSIKGG-------KEETQAFINDLH 322 (386)
T ss_pred cHH--HHHHHHHHHHHHHHHHHHc----CCCccEEECCCcHHHHHhCCCCCceEEEEEcCC-------HHHHHHHHHhCC
Confidence 432 2445556666666666654 3444433 36788999998421 123567777776
Q ss_pred hCCce
Q 013235 438 GICAL 442 (447)
Q Consensus 438 ~~Gvl 442 (447)
..++.
T Consensus 323 ~~~~~ 327 (386)
T PRK06767 323 FITIA 327 (386)
T ss_pred ccEEe
Confidence 55443
No 251
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.54 E-value=6.7e-13 Score=135.39 Aligned_cols=236 Identities=18% Similarity=0.161 Sum_probs=151.0
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+|.++...+|+++|+++... +.+++++||+.|+..++... ..++++|++.+..| |.+....... ..
T Consensus 65 ~r~~~p~~~~le~~lA~l~g~--~~al~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~~-~~t~~~~~~~--------~~ 131 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEGA--EACFATASGMSAVFTALGAL--LGAGDRLVAARSLF-GSCFVVCNEI--------LP 131 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCC--CcEEEECChHHHHHHHHHHH--hCCCCEEEEccCCc-chHHHHHHHH--------HH
Confidence 467888899999999999853 46789999999999988654 23567777766544 4443322100 00
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+.. ++.+|++|...++.|.+.+ +++|.++|+++|+++|+||
T Consensus 132 ~~G~~v~~vd~-------~d----~~~l~~ai~~----~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~ 192 (403)
T PRK07810 132 RWGVETVFVDG-------ED----LSQWEEALSV----PTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDN 192 (403)
T ss_pred HcCcEEEEECC-------CC----HHHHHHhcCc----CceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 11332222211 23 5667776642 5678999988888888876 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-Cccc-cccccCHHHHH-hhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPL-GAVVTTPEIAE-VLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-gav~~~~~i~~-~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
++.- +... . .. .+| .|+++ ++|.+++ |..+ |+++++++.+. .+...........+|..++.++..|+.
T Consensus 193 a~a~-~~~~-~--~~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t 265 (403)
T PRK07810 193 VFAT-PLLQ-R--GL-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET 265 (403)
T ss_pred CCCc-cccC-C--hh-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc
Confidence 9852 2111 1 11 123 58886 6699986 6666 77778877554 232111112224678888888888876
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe------------------ecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR------------------GRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr------------------g~Gl~~giel~ 416 (447)
+.. ..++..++..++.+.|+ +++.+..|. |.|-|+.+++.
T Consensus 266 l~~--R~~~~~~~a~~~a~~L~----~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 266 LAL--RVRHSNASALRIAEFLE----GHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred HHH--HHHHHHHHHHHHHHHHh----cCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 532 33444444444444443 344454444 78999999995
No 252
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.54 E-value=8.5e-13 Score=134.41 Aligned_cols=237 Identities=16% Similarity=0.124 Sum_probs=155.6
Q ss_pred cccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 135 ~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
..++.++...+|+++|+++.+. +.+++++||++|+..++.... ..++.||+..++|++........ .
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all--~~GD~Vi~~~~~y~~~~~~~~~~---------~ 124 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFL--KPGDRVVSIKDTYGGTNKIFTEF---------L 124 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc--CCCCEEEEcCCchHHHHHHHHHH---------H
Confidence 3456788999999999999853 557788999999999986442 35678999999986542211110 0
Q ss_pred cCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
...|+.....+. .| .+++++.+.. ++.+|++|...+++|.+.+ +++|.++|+++|+++|+|
T Consensus 125 ~~~Gi~v~~vd~-------~d----~e~l~~~i~~----~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD 185 (398)
T PRK08249 125 PRMGVDVTLCET-------GD----HEQIEAEIAK----GCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVD 185 (398)
T ss_pred hhCCeEEEEcCC-------CC----HHHHHHhcCC----CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEE
Confidence 111333222211 23 4567766642 5678888877788888876 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEE--eeccccC-Cccc-cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
|+|..+. .. .......|+++ ++|.+++ |-.+ |++++++++++.+...........+|..++.++..|+.
T Consensus 186 ~t~a~~~-~~------~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t 258 (398)
T PRK08249 186 NTFATPI-NQ------NPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKT 258 (398)
T ss_pred CCcCccc-cC------CchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch
Confidence 9987431 11 11123457774 6799986 5444 66778888887765433334455678888888887776
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee------------------EeecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~Gl~~giel~ 416 (447)
+.. ..++..++.+.+.+.|++ ++.+.. ..|.|-|+.|++.
T Consensus 259 L~~--R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~ 316 (398)
T PRK08249 259 LKL--RVRQQQESAMALAKYLQT----HPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK 316 (398)
T ss_pred HHH--HHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc
Confidence 632 334445555555555554 332321 2467889999995
No 253
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.54 E-value=2.1e-12 Score=130.61 Aligned_cols=277 Identities=13% Similarity=0.095 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 118 p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
++..+++.+.+.....+ ...+...++++.+++.+ +.+.+++++||++|+..+++... ..+++.||+...+|.+.
T Consensus 11 ~~e~~a~~~~~~~~~~~---~~g~~~~~~e~~la~~~--g~~~~v~~~sgt~aL~~~l~al~-~~pGd~Viv~~~t~~~~ 84 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS---GDGPFSRRCETWLENRT--GTKKALLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVST 84 (376)
T ss_pred HHHHHHHHHHHHcCCcc---CCcHHHHHHHHHHHHHh--CCCeEEEeCCHHHHHHHHHHHcC-CCCcCEEEECCCCcHHH
Confidence 45677787777664321 12456788999999987 35789999999999999887542 34568899999888765
Q ss_pred chhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChH
Q 013235 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (447)
Q Consensus 198 ~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l 277 (447)
....... |...+..+... ..+..| .+++++.+.. ++.+|+ |++ ..|...+ +
T Consensus 85 ~~~~~~~-------------G~~~v~vd~d~-~~~~~d----~~~le~~i~~----~tk~Ii--p~~-~~G~~~d----~ 135 (376)
T TIGR02379 85 ANAFVLR-------------GAKIVFVDIRP-DTMNID----ETLIESAITH----RTKAIV--PVH-YAGVACD----M 135 (376)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCCC----HHHHHHhcCc----CceEEE--EeC-CCCCccC----H
Confidence 4333221 22222222111 112233 4567766642 455655 443 3455554 8
Q ss_pred HHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee----ccccCCccccccccC-HHHHHhhcCCc-c-
Q 013235 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTRRN-Y- 350 (447)
Q Consensus 278 ~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pigav~~~-~~i~~~l~~~~-~- 350 (447)
++|.++|++||+++|.|++|+ +|. .+.-...|..-|+.+|| |.++.|.+.|+++++ +++++.+.... +
T Consensus 136 ~~I~~la~~~~i~vIeDaa~~-~g~----~~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g 210 (376)
T TIGR02379 136 DTIMALANKHQLFVIEDAAQG-VMS----TYKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKG 210 (376)
T ss_pred HHHHHHHHHCCCEEEEECccc-cCC----ccCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhC
Confidence 999999999999999999996 432 11112334445899999 999988788988776 77776654311 1
Q ss_pred -------------------cccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH----hcCC-eeeE-e
Q 013235 351 -------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD----KYGI-IGDV-R 405 (447)
Q Consensus 351 -------------------~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~-i~~v-r 405 (447)
+..|--+.+.++.+++.|+.+++ +.++-+++.++..+.|.++.. ..+. .... .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~--~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~ 288 (376)
T TIGR02379 211 TNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADR--INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQH 288 (376)
T ss_pred CCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCee
Confidence 11122346777778888887644 555556666677777766431 1111 1011 1
Q ss_pred ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 406 g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
... ++.+.+... ....++.+.|.++||-++.
T Consensus 289 ~~~-~~~i~~~~~--------~~r~~l~~~L~~~gI~~~~ 319 (376)
T TIGR02379 289 NAH-MFYIKLKDE--------DDRNELIKYLKEQEIMAVF 319 (376)
T ss_pred eeE-EEEEEECCc--------CCHHHHHHHHHHCCCCccc
Confidence 112 223444211 1246799999999998764
No 254
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.53 E-value=1.1e-12 Score=132.91 Aligned_cols=236 Identities=15% Similarity=0.099 Sum_probs=154.0
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+|.++...+|+++|+++.. .+.+++++||++|+..++... ..+++.|++..++|.+.......+...
T Consensus 46 ~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~al--l~~GD~Vl~~~p~y~~~~~~~~~~~~~-------- 113 (382)
T TIGR02080 46 SRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTAL--LGPDDLLVAPHDCYGGTYRLLNALAKK-------- 113 (382)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHH--cCCCCEEEEcCCCcHHHHHHHHHHHhh--------
Confidence 56788899999999999885 356899999999999999754 335678999999996543322111110
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
.++.....+. .| .+++++.+.. ++.+|++|..++++|.+.+ +++|.++|+++|+++|+||
T Consensus 114 -~~~~v~~~d~-------~d----~~~l~~ai~~----~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~ 173 (382)
T TIGR02080 114 -GCFRVLFVDQ-------GD----EQALRAALAQ----KPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDN 173 (382)
T ss_pred -cCeEEEEECC-------CC----HHHHHHhcCc----CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEEC
Confidence 1121111110 12 4566666642 4678888877888888876 8999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEE--EeeccccC--Ccccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
+|..+-.. .......|++ +++|.++| ++..|++++ ++++.+.+.......+...+|+.+..++..|+.
T Consensus 174 a~~~~~~~-------~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~t 246 (382)
T TIGR02080 174 TFLSPALQ-------NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLRT 246 (382)
T ss_pred CCcccccC-------CchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccch
Confidence 99632111 1111234777 47899974 578888776 577776665333334555789998888777765
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee------------------EeecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~Gl~~giel~ 416 (447)
+... +++..++...+.+.|+ .++.+.. ..|.|-|+.|++.
T Consensus 247 l~~R--~~~~~~na~~~a~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 247 LVAR--MRLQQRNAQAIVEYLQ----TQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred HHHH--HHHHHHHHHHHHHHHH----hCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 5322 3333444444444443 3343322 2467889999995
No 255
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.53 E-value=8e-12 Score=121.26 Aligned_cols=272 Identities=14% Similarity=0.115 Sum_probs=171.9
Q ss_pred CCHHHHHHHHHHHHhcccccccccch-HHHHHHHHHHHhCC--CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcC
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKMP--GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN 192 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~-~~~elae~L~~~~~--~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~ 192 (447)
+.|.|.+|+.+.++....+-+ +.++ ...++....+++.. ...+.++|+++.--++..+|+.... .++.|++-.+
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~--~gd~Vvi~tP 115 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK--PGDGVVIQTP 115 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc--CCCeeEecCC
Confidence 689999999999887533222 2233 44556666666543 3456799999999999999985443 5788999999
Q ss_pred CcccCchhhhhccCCCCccccccCCCeEeecCCCCcC-CCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceee
Q 013235 193 AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYR-GVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIE 271 (447)
Q Consensus 193 ~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~-~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~ 271 (447)
.||=-. .+... .|-..+++|..+. +.|.-| .++||+.+... .....++++|-++.| .+
T Consensus 116 vY~PF~-~~i~~------------n~R~~i~~pL~~~~~~y~iD----~~~LE~~~~~~--~vkl~iLCnPHNP~G--rv 174 (388)
T COG1168 116 VYPPFY-NAIKL------------NGRKVIENPLVEDDGRYEID----FDALEKAFVDE--RVKLFILCNPHNPTG--RV 174 (388)
T ss_pred CchHHH-HHHhh------------cCcEEEeccccccCCcEEec----HHHHHHHHhcC--CccEEEEeCCCCCCC--cc
Confidence 996211 11111 2334455554432 122234 67888888642 124677778866655 45
Q ss_pred CCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCC-----EEEe--ecccc-CCcccccccc-CHHHH
Q 013235 272 LAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD-----IVTM--AKGIG-NGIPLGAVVT-TPEIA 342 (447)
Q Consensus 272 ~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pD-----ivt~--sK~lg-~G~pigav~~-~~~i~ 342 (447)
.+++.|.+|.+||.+||+++|.|||+..+-..|.+...+ ..+.|+ |.++ ||++. .|+-.++++. ++++.
T Consensus 175 wt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~--a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr 252 (388)
T COG1168 175 WTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPF--ASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR 252 (388)
T ss_pred ccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccch--hhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH
Confidence 689999999999999999999999999998777322222 223332 3333 59887 6888888765 55554
Q ss_pred HhhcCC-cccccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecce-eEEEEEe
Q 013235 343 EVLTRR-NYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF-LLGVEFV 416 (447)
Q Consensus 343 ~~l~~~-~~~~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl-~~giel~ 416 (447)
+.+... ......+-|.+++.|..++.+.=+. +++.+.++++.+++.+.|.+. .|.+.-..-.|. +++++|.
T Consensus 253 ~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~---~P~v~v~~p~gTYL~WLD~r 327 (388)
T COG1168 253 AKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH---LPGVKVTEPQGTYLAWLDCR 327 (388)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh---CCCcEEecCCCceeeeeecc
Confidence 444332 2234455688898888888763211 235555666666666555543 355555555554 4567774
No 256
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.53 E-value=5.4e-12 Score=127.55 Aligned_cols=289 Identities=16% Similarity=0.107 Sum_probs=168.4
Q ss_pred CCHHHHHHHHHHHHhcc-cc-ccccc-----chHHHHHHHHHHHhCCCCC-ceEEEcCCHHHHHHHHHHHHHhhcCCCeE
Q 013235 116 CHPYVVDSIVNQIKRIQ-HS-TVLYL-----NHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDI 187 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~-~~-~~~~~-----~~~~~elae~L~~~~~~~~-~~v~~~~sGseA~e~Aik~ar~~t~~~~i 187 (447)
.++.+.+++.+.++... .. ...|. .....++.+.|++++.... ++|+|++|+++++..++.. ....++.|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~--~~~~gd~v 89 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG--LLKEGDHV 89 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh--ccCCCCEE
Confidence 45789999988887642 11 11122 2556788899999886533 4799999999999998864 23356778
Q ss_pred EEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCC
Q 013235 188 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVG 267 (447)
Q Consensus 188 i~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~g 267 (447)
++...+|.+.......... ..|+.....+... .+..| .+++++.+. + ++++|++..+++++
T Consensus 90 l~~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~~--~~~~d----~~~l~~~~~---~-~~~~v~~~~~~n~t 150 (376)
T TIGR01977 90 ITTPMEHNSVARPLECLKE---------QIGVEITIVKCDN--EGLIS----PERIKRAIK---T-NTKLIVVSHASNVT 150 (376)
T ss_pred EECcchhhHHHHHHHHHHH---------HcCcEEEEEecCC--CCCcC----HHHHHHhcC---C-CCeEEEEECCCCCc
Confidence 7766665433211111100 0122222221111 11123 566766663 2 56677777778888
Q ss_pred ceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHHH-HHh
Q 013235 268 GIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEI-AEV 344 (447)
Q Consensus 268 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i-~~~ 344 (447)
|.+.+ +++|.++|+++|+++|+|++++ +|... +..+. ..+|+++++ |.+++.-..|+++.+++. +..
T Consensus 151 G~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~---~~~~~--~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~ 220 (376)
T TIGR01977 151 GTILP----IEEIGELAQENGIFFILDAAQT-AGVIP---IDMTE--LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKP 220 (376)
T ss_pred cccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC---CCchh--cCCCEEEecccccccCCCCceEEEEcCCcCcCc
Confidence 88887 8999999999999999999995 54332 11222 346888765 988753334666655543 111
Q ss_pred hcCCc--c--------------cccCCCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCeee--
Q 013235 345 LTRRN--Y--------------FNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGD-- 403 (447)
Q Consensus 345 l~~~~--~--------------~~T~~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~-- 403 (447)
+.... . +.....|....++..++|+.+.+. .+.++.+++.++++++|.++. ...+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~~~ 299 (376)
T TIGR01977 221 LKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREIN-KVKIYGPAD 299 (376)
T ss_pred eecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-CeEEeCCCC
Confidence 11100 0 011123455566666788887654 356777778888877776542 1111110
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC-Cceeec
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI-CALFFS 445 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~ 445 (447)
....+.++.+.+... ...++.+.|.++ ||.++.
T Consensus 300 ~~~~~~~v~~~~~~~---------~~~~~~~~L~~~~gi~v~~ 333 (376)
T TIGR01977 300 PANRVGVVSFTVEGI---------DSEEVADILDEKFDIATRT 333 (376)
T ss_pred ccccCCeEEEEECCC---------CHHHHHHHHhccCCEEEEc
Confidence 111345666665211 135688888887 888754
No 257
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.52 E-value=1e-11 Score=125.17 Aligned_cols=248 Identities=13% Similarity=0.054 Sum_probs=145.0
Q ss_pred eEEEecCCcccccCCCC--CHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHC--HPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~--~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ 177 (447)
.+|+...-+ ..||-+ +++|.+|+.+.++.+. ...+...++++++++.++ .+.+++++|+++|+.++++.
T Consensus 9 ~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~~-----~~~~~~~~~~~~~a~~~g--~~~~~~~~g~t~al~~al~a 79 (363)
T TIGR01437 9 KVINASGKM--TILGVSTVSDEVADAQKRGAQNYF-----EIKELVNKTGEYIANLLG--VEDAVIVSSASAGIAQSVAA 79 (363)
T ss_pred eEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHhhC--CCeEEEEcCHHHHHHHHHHH
Confidence 455544333 356655 7999999999876541 245667889999999885 45789999999999999986
Q ss_pred HHhhcCCC---------------eEEEEcCCcccCc---hhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHH
Q 013235 178 ARLYTGCN---------------DIISLRNAYHGNA---AGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239 (447)
Q Consensus 178 ar~~t~~~---------------~ii~~~~~yHG~~---~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~ 239 (447)
... +++ +||+..+.|..+. ...+.. .|...+..+. .+..|
T Consensus 80 l~~--~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~------------~g~~~v~v~~----~~~~d---- 137 (363)
T TIGR01437 80 VIT--RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL------------GGGKVVEAGY----ANECS---- 137 (363)
T ss_pred Hhc--CCCcchhhcccccccccceEEEECccchhcCCchHHHHHh------------cCCeEEEEcC----CCCCC----
Confidence 632 333 6666665443221 111111 1222222211 11123
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCE
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI 319 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDi 319 (447)
.+++++.+.. +..+.++++...+..|.+.+ +++|.++|++||+++|+|++|. . .+.....+| .|+
T Consensus 138 ~~~le~ai~~---~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~-----~~~~~~~~g--~D~ 202 (363)
T TIGR01437 138 AEQLEAAITE---KTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E-----DLQKYYRLG--ADL 202 (363)
T ss_pred HHHHHHhcCh---hceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C-----chHHHHHcC--CCE
Confidence 5678877752 22334435543445566665 8999999999999999999996 1 111111233 488
Q ss_pred EEee--ccccCCccccccccCHHHHHhhcCCccc--ccCCCChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHH
Q 013235 320 VTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNYF--NTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTA 393 (447)
Q Consensus 320 vt~s--K~lg~G~pigav~~~~~i~~~l~~~~~~--~T~~~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~ 393 (447)
+++| |.++ |...|++++++++++.+....+. ..+......+++..++++.+.+ .+..+...+..++++++|.+
T Consensus 203 ~~~S~~K~l~-gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~ 281 (363)
T TIGR01437 203 VIYSGAKAIE-GPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNT 281 (363)
T ss_pred EEEeCCcccC-CCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhc
Confidence 8766 8885 45689988888888765321111 1111112234444455655543 22333333445566666665
Q ss_pred H
Q 013235 394 L 394 (447)
Q Consensus 394 l 394 (447)
+
T Consensus 282 i 282 (363)
T TIGR01437 282 L 282 (363)
T ss_pred C
Confidence 4
No 258
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.1e-12 Score=128.80 Aligned_cols=242 Identities=19% Similarity=0.183 Sum_probs=155.8
Q ss_pred HHHHHHHHHHhcccccc-----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q 013235 120 VVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194 (447)
Q Consensus 120 v~~A~~~~l~~~~~~~~-----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~y 194 (447)
..+++.+.++++++... ......+.++.+..++.+... ..+...-|..+|..-+. .+-++...|.-+.-.
T Consensus 156 ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e--~a~vF~mGf~TNs~~~p---~l~~~gsLIiSDelN 230 (519)
T KOG1357|consen 156 CAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVE--DAIVFSMGFATNSMNIP---SLLGKGSLIISDELN 230 (519)
T ss_pred CChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCc--ceEEEeccccccccCcc---eeecCCcceeecccc
Confidence 33344445555544211 355778889999999888643 33444556555554443 122555566667777
Q ss_pred ccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC-----CCCeEEEEEccccCCCce
Q 013235 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT-----SGHVAGFLSESIQGVGGI 269 (447)
Q Consensus 195 HG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~-----~~~~aavi~Epi~~~gG~ 269 (447)
|+.......+++....-+.+ ||.+.+..-|++.|.+.. +-+...+|+|.+.++.|.
T Consensus 231 HaSi~~GaRLSgAtiRVfkH-------------------Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~ 291 (519)
T KOG1357|consen 231 HASLITGARLSGATTRVFRH-------------------NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGT 291 (519)
T ss_pred chheeccccccCceEEEEec-------------------CCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCe
Confidence 87776655555433222211 453333333444443322 335678999999999999
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEeccccC--ccccCCCcccccccCCCC---CEE--EeeccccC-CccccccccCHHH
Q 013235 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGFEAHGVVP---DIV--TMAKGIGN-GIPLGAVVTTPEI 341 (447)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--fgr~G~~~~~~~~~gv~p---Div--t~sK~lg~-G~pigav~~~~~i 341 (447)
++. |+++..+++++.+.|++||++++ .|++| ....+.+++.| ||+ ||.|++|+ | |++.+++++
T Consensus 292 iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG--rgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~l 362 (519)
T KOG1357|consen 292 IVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG--RGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKEL 362 (519)
T ss_pred ecc----cHHHHHhhccccEEEEeeccccccccCCCC--cceeeccCCCchhheeecceehhhccccc---ceecCcHHH
Confidence 998 89999999999999999999885 46677 34457777755 554 78899984 4 578999999
Q ss_pred HHhhcCCcccccCC--CChHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHH
Q 013235 342 AEVLTRRNYFNTFG--GNPVCTAAGHAVLKVIQKD-------KLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 342 ~~~l~~~~~~~T~~--~np~a~aaala~L~~i~~~-------~l~~~~~~~g~~l~~~L~~l 394 (447)
++.+...++..+++ -+|..++..+..++.|..+ +-.+++.++..++|..|+..
T Consensus 363 id~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 363 IDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM 424 (519)
T ss_pred HhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence 99987655444443 3466666677778887632 24466666777777666554
No 259
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.51 E-value=1.2e-12 Score=133.33 Aligned_cols=242 Identities=17% Similarity=0.099 Sum_probs=151.4
Q ss_pred ccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccc
Q 013235 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (447)
Q Consensus 134 ~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~ 213 (447)
...+|.++...+|+++|+++.+. +..+.++||+.|+..++... ...+++|++.+..|.+.........
T Consensus 58 ~y~r~~~p~~~~Le~~lA~l~G~--~~~~~~~sG~~Ai~~~l~~~--l~~Gd~Vl~~~~~y~~~~~~~~~~~-------- 125 (398)
T PRK07504 58 IYSRYSNPTVDMFEKRMCALEGA--EDARATASGMAAVTAAILCQ--VKAGDHVVAARALFGSCRYVVETLL-------- 125 (398)
T ss_pred eeecCCCchHHHHHHHHHHHhCC--CeeeEecCHHHHHHHHHHHH--hCCCCEEEEcCCchhHHHHHHHHHH--------
Confidence 33467788899999999999854 44556889999998877532 2356788888887765433221110
Q ss_pred ccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
...|+.....+. .| .+++++.+. + ++.+|++|...++.|.+.+ +++|.++|+++|+++|+
T Consensus 126 -~~~G~~v~~vd~-------~d----~e~l~~ai~---~-~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvv 185 (398)
T PRK07504 126 -PRYGIESTLVDG-------LD----LDNWEKAVR---P-NTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVV 185 (398)
T ss_pred -hhcCeEEEEECC-------CC----HHHHHHhcC---c-CceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEE
Confidence 011333222211 23 466766664 2 5678888888888888876 99999999999999999
Q ss_pred eccccCccccCCCcccccccCCCCCEEE--eeccccC-Ccccc-ccccCHHHHH-hhcCCcccccCCCChHHHHHHHHHH
Q 013235 294 DEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPLG-AVVTTPEIAE-VLTRRNYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 294 DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pig-av~~~~~i~~-~l~~~~~~~T~~~np~a~aaala~L 368 (447)
||+|..+ ... .. .....|+++ ++|.+++ |.++| +++++++.+. .+...........+|..++.++..|
T Consensus 186 D~a~a~~-~~~-~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L 258 (398)
T PRK07504 186 DNVFATP-LFQ-KP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGL 258 (398)
T ss_pred ECCcccc-ccC-Cc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 9998632 111 11 122358875 5799986 78885 5667776554 2321111122345788888888888
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHH----hcCCe----------eeEeecceeEEEEEe
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKD----KYGII----------GDVRGRGFLLGVEFV 416 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i----------~~vrg~Gl~~giel~ 416 (447)
+.+.. ..++..++...+.+.|++... .||.. ...+|.|.|+.|++.
T Consensus 259 ~tl~~--R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 259 ETLPV--RVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred chHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 77632 334444556666665554210 01111 123567899999994
No 260
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.50 E-value=2.9e-12 Score=128.98 Aligned_cols=233 Identities=18% Similarity=0.117 Sum_probs=151.3
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.. .+.++.++||++|+.+++.+. ..+++||+....|++........ . +
T Consensus 49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~~l---~~GD~VI~~~~~yg~~~~~~~~~-~--------~ 114 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFSVF---PVGSKVVAVRDLYGGSFRWFNQQ-E--------K 114 (364)
T ss_pred eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHh---CCCCEEEEecCCcCchHHHHHHH-H--------h
Confidence 46778889999999999984 567899999999999998532 35688998888885543221111 0 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..++.. .|..| .+++++.+. + ++.+|++|...+..|.+.. +++|.++|+++|+++|+||
T Consensus 115 ~~~~~~---------~~~~d----~~~l~~~i~---~-~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~ 173 (364)
T PRK07269 115 EGRFHF---------TYANT----EEELIAAIE---E-DTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDN 173 (364)
T ss_pred cCcEEE---------EecCC----HHHHHHhcC---c-CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEEC
Confidence 011111 11123 456776664 2 4567888877777777775 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEEe--eccccC-C-cccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGN-G-IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt~--sK~lg~-G-~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
++.. + .+ ....+.-.|++++ .|.++| | .-.|++++ ++++++.+...........+|+.++.++..|+.
T Consensus 174 t~~~----~--~~-~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t 246 (364)
T PRK07269 174 TFYS----P--IY-QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT 246 (364)
T ss_pred CCcc----c--cc-CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc
Confidence 9631 1 11 1223455788875 498875 3 33466676 466766554211112234679998888888865
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE--eecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV--RGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v--rg~Gl~~giel~ 416 (447)
+. ..+++..++...+.+.| +.++.+..| +|.|-|+.|++.
T Consensus 247 L~--~r~~~~~~na~~~a~~L----~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 247 LS--LRMERSTANAQEVVAFL----KKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HH--HHHHHHHHHHHHHHHHH----HhCCCccEEeCCCcCcEEEEEEC
Confidence 52 23344445555554444 456655543 688999999984
No 261
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.50 E-value=3.3e-12 Score=129.61 Aligned_cols=237 Identities=15% Similarity=0.097 Sum_probs=150.8
Q ss_pred cccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 135 ~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
-.+|+++...+|+++|+++.+. +.+++++||++|+..++.... ..++.|++.+++|++..........
T Consensus 46 Y~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~--~~GD~Vl~~~~~y~~~~~~~~~~~~-------- 113 (386)
T PRK08045 46 YSRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFL--KPGDLLVAPHDCYGGSYRLFDSLAK-------- 113 (386)
T ss_pred eeCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHc--CCCCEEEEcCCCcHHHHHHHHHHHh--------
Confidence 3567888999999999999863 468899999999999987432 3567899999999754432221110
Q ss_pred cCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
..++.....+. .| .+++++.+.. ++.+|++|..+++.|.+.+ +++|.++|+++|+++|+|
T Consensus 114 -~~gi~v~~vd~-------~d----~e~l~~~l~~----~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivD 173 (386)
T PRK08045 114 -RGCYRVLFVDQ-------GD----EQALRAALAE----KPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVD 173 (386)
T ss_pred -hCCeEEEEeCC-------CC----HHHHHHhccc----CCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEE
Confidence 01222111110 12 4566666542 5678888888888888876 899999999999999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEE--eeccccC--Ccccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
|+|..... . .....-.|+++ ++|.++| +...|++++ ++++.+.+.......+...+|+.+..++..|+
T Consensus 174 eay~~~~~-~------~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~ 246 (386)
T PRK08045 174 NTFLSPAL-Q------NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR 246 (386)
T ss_pred CCCCcccc-C------CchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhc
Confidence 99864311 1 11222348774 7799984 467888876 57776655432222344577888888777776
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE------------------eecceeEEEEEe
Q 013235 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV------------------RGRGFLLGVEFV 416 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~Gl~~giel~ 416 (447)
.+.. ..++..+....+.+.|+ +|+.+..| .|.|-|+.|++.
T Consensus 247 tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 247 TLVP--RMELAQRNAQAIVKYLQ----TQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred cHHH--HHHHHHHHHHHHHHHHH----cCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 5431 12222333333333332 34433322 477889999985
No 262
>PRK06460 hypothetical protein; Provisional
Probab=99.50 E-value=1.6e-12 Score=131.48 Aligned_cols=240 Identities=13% Similarity=0.059 Sum_probs=144.4
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+..++...+|+++|+++.... . .+.++||++|+..++... ...+++|++..+.|.+........ ..
T Consensus 40 ~r~~~p~~~~L~~~lA~l~g~~-~-~v~~~sG~~ai~~~l~al--~~~Gd~Vl~~~~~~~~ty~~~~~~---------~~ 106 (376)
T PRK06460 40 SREANPTVLELTKKIVELENAE-M-GVAFSSGMGAISTTALAL--LKPGNSVLVHRDMFGRSYRFFTDY---------LK 106 (376)
T ss_pred eCCCCccHHHHHHHHHHHhCCC-c-EEEeCCHHHHHHHHHHHH--hCCCCEEEEecCCcCcHHHHHHHH---------HH
Confidence 4456788889999999998653 3 345588999999888643 224577887665553221111000 00
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. ++ .+.+++++. .++.+|++|..++++|.+.+ +++|.++|+++|+++|+||
T Consensus 107 ~~G~~v~~~~~-------~~----~~~l~~~~~----~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDe 167 (376)
T PRK06460 107 NWGVNVDASNP-------GS----DNIIEKAKS----KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDA 167 (376)
T ss_pred hhCcEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEEC
Confidence 11322222211 11 122344332 25678888988888898887 7899999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEE--EeeccccC--CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
+|..+ ... .......|++ +++|.++| +..+|++++++++++.+.......+.+.+|..+..++..++.+
T Consensus 168 a~~~~-~~~------~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l 240 (376)
T PRK06460 168 TFSTP-INQ------KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTL 240 (376)
T ss_pred CcCcc-ccC------ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH
Confidence 98632 111 1111124777 57899974 3678999999999887764322223334565555555555555
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH----hcCCe----------eeEeecceeEEEEEe
Q 013235 372 QKDKLQNNAHVVGSYLKERLTALKD----KYGII----------GDVRGRGFLLGVEFV 416 (447)
Q Consensus 372 ~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i----------~~vrg~Gl~~giel~ 416 (447)
+ ...++..+..+++.+.|++... .||.+ ....|.|-|+.|++.
T Consensus 241 ~--~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~ 297 (376)
T PRK06460 241 K--IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN 297 (376)
T ss_pred H--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 3 2445566666666666654310 01111 012477899999985
No 263
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.49 E-value=3.8e-12 Score=128.43 Aligned_cols=234 Identities=19% Similarity=0.115 Sum_probs=147.7
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+|.++...+|+++|+++.+. +..++++||++|+..++.+ ...+++||+.++.|++......... .
T Consensus 47 ~r~~~pt~~~le~~la~l~g~--~~~~~~~sG~~ai~~~~~l---l~~Gd~Vl~~~~~y~~t~~~~~~~~---------~ 112 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGG--DQGFACSSGMAAIQLVMSL---FRSGDELIVSSDLYGGTYRLFEEHW---------K 112 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHH---hCCCCEEEEecCCcCcHHHHHHHHh---------h
Confidence 567888999999999999864 3457899999999987642 2356889999999986432221110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+.. ++.+|++|...++.|.+. .+++|.++|+++|+++|+||
T Consensus 113 ~~G~~v~~vd~-------~d----~~~l~~~i~~----~tklv~le~P~NP~~~~~----dl~~I~~la~~~g~~lIvD~ 173 (366)
T PRK08247 113 KWNVRFVYVNT-------AS----LKAIEQAITP----NTKAIFIETPTNPLMQET----DIAAIAKIAKKHGLLLIVDN 173 (366)
T ss_pred ccCceEEEECC-------CC----HHHHHHhccc----CceEEEEECCCCCCCcHH----HHHHHHHHHHHcCCEEEEEC
Confidence 11222222211 12 4667766642 566788776556555444 39999999999999999999
Q ss_pred ccc-CccccCCCcccccccCCCCCEE--EeeccccC--CccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 296 VQA-GFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 296 v~t-Gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
++. ++ .+ . ......||+ +++|.++| ++..|+++++ +++.+.+.......+...+|..+..++..|+
T Consensus 174 t~~~~~--~~-~-----p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~ 245 (366)
T PRK08247 174 TFYTPV--LQ-R-----PLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK 245 (366)
T ss_pred CCcccc--cc-C-----chhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence 983 22 11 1 111234776 47899985 4678888886 6676665432223344567877777777775
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee--EeecceeEEEEEe
Q 013235 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD--VRGRGFLLGVEFV 416 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrg~Gl~~giel~ 416 (447)
.+.. ..++.+++...+.+.|+ +++.+.. .+|.|-|+.+++.
T Consensus 246 tl~~--r~~~~~~~a~~l~~~L~----~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 246 TLAL--RMRQHEENAKAIAAFLN----EQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred cHHH--HHHHHHHHHHHHHHHHH----hCCCeeEEecCCcCcEEEEEEC
Confidence 4422 22333455555555444 4455554 5667889999873
No 264
>PRK14012 cysteine desulfurase; Provisional
Probab=99.49 E-value=4.4e-12 Score=129.75 Aligned_cols=258 Identities=13% Similarity=0.087 Sum_probs=152.7
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHH---hcccccc-----cc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIK---RIQHSTV-----LY-LNHAIADFAEALASKMPGNLKVVFFTNSGTE 169 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~---~~~~~~~-----~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGse 169 (447)
+.|+|..+. +..++.+.+++.+.+. ....... .+ ..+...++.+++++.++.+.+.++|++||++
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 468886542 3467899999988775 2211110 01 1245667889999998766677999999999
Q ss_pred HHHHHHHHHHh--hcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 170 ANELAIMMARL--YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 170 A~e~Aik~ar~--~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
|+..+++.+.. ...++.|++....|+........+... ...+..++.+. .+..| .+++++.+
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~--------g~~~~~v~~~~----~g~~d----~~~l~~~i 141 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLERE--------GFEVTYLDPQS----NGIID----LEKLEAAM 141 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhC--------CCEEEEEccCC----CCcCC----HHHHHHhc
Confidence 99999876532 234567777766664433222111000 01122232211 11123 56777776
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--cc
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~ 325 (447)
.. ++.++++..+++++|.+.+ +++|.++|+++|+++|+|++|+ +|..- ++.....+|+++++ |.
T Consensus 142 ~~----~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~-----~~~~~~~~D~~~~s~~K~ 207 (404)
T PRK14012 142 RD----DTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP-----IDLSKLKVDLMSFSAHKI 207 (404)
T ss_pred CC----CCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc-----cCcccCCCCEEEEehhhc
Confidence 42 4568888888888998887 8999999999999999999996 43221 12223458999888 97
Q ss_pred ccCCccccccccCHHHHHhhcCCccc------ccCC-CChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHH
Q 013235 326 IGNGIPLGAVVTTPEIAEVLTRRNYF------NTFG-GNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTA 393 (447)
Q Consensus 326 lg~G~pigav~~~~~i~~~l~~~~~~------~T~~-~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~ 393 (447)
+|.+ .+|+++.+++....+....++ ...+ .+.....+..++++.++. ++..++.+++.+++.+.|++
T Consensus 208 ~gp~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~ 283 (404)
T PRK14012 208 YGPK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD 283 (404)
T ss_pred cCCC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 7543 578888776543222211111 0111 122223333355554432 23456666666677666655
No 265
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.49 E-value=2.3e-12 Score=129.93 Aligned_cols=232 Identities=18% Similarity=0.127 Sum_probs=147.1
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+|+++...+|+++|+++. + +.+++++||++|+..++... ...+++||+.+++|++....+.... .
T Consensus 46 ~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~~~~~~~~~l---------~ 111 (366)
T PRK07582 46 GRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRAL--LRPGDTVVVPADGYYQVRALAREYL---------A 111 (366)
T ss_pred ECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHh--cCCCCEEEEeCCCcHhHHHHHHHHH---------h
Confidence 4678888999999999998 3 34667899999999888643 3456889999999976654332110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .+. .+... .++..|++|...+++|.+.+ +++|.++|+++|+++|+||
T Consensus 112 ~~G~~v~~v~~-------~~~------~~~~~-----~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~ 169 (366)
T PRK07582 112 PLGVTVREAPT-------AGM------AEAAL-----AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDN 169 (366)
T ss_pred cCeEEEEEECC-------CCh------HHHhc-----cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEEC
Confidence 11333332221 110 11111 25567778877777776665 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC--Ccccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
+|.-. .|. .......|+++ ++|.++| |+++|++++ ++++++.+........-..+|+.+..++..|+.
T Consensus 170 t~~~~--~~~-----~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t 242 (366)
T PRK07582 170 TTATP--LGQ-----RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT 242 (366)
T ss_pred CCCCc--ccc-----CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc
Confidence 98421 121 11123458875 7799975 688999887 477777665322222223468887777766654
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe------------------ecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR------------------GRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr------------------g~Gl~~giel~ 416 (447)
+. -..++..++...+.+.|++. +.+..|. |.|-|+.|++.
T Consensus 243 l~--~R~~~~~~na~~la~~L~~~----p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 243 LG--LRFARQCANALAVAELLAGH----PAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred HH--HHHHHHHHHHHHHHHHHHhC----CCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 32 23355556666666665543 3333332 67889999984
No 266
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.48 E-value=4.5e-12 Score=128.97 Aligned_cols=194 Identities=21% Similarity=0.172 Sum_probs=123.1
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+|.++...+|+++|+++.+ .+.+++++||++|+.+++... ..+++.||+.+++|.+.....-... .
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g--~~~~l~~~sgt~Ai~~~l~al--~~~GD~Vl~~~~~y~~~~~~~~~~~---------~ 126 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEG--GRHALLQPSGLAAISLVYFGL--VKAGDDVLIPDNAYGPNRDHGEWLA---------R 126 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhC--CCeEEEeccHHHHHHHHHHHH--hCCCCEEEEecCCcccHHHHHHHHH---------H
Confidence 46778888999999999885 467999999999999999755 2466889999988865432110100 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .+ .+++++.+. .++.+|++|...+..|... .+++|.++|+++|+++|+||
T Consensus 127 ~~Gi~v~~vd~-------~~----~~~l~~~i~----~~tklV~le~p~Np~~~~~----di~~I~~ia~~~gi~livD~ 187 (394)
T PRK07050 127 DFGITVRFYDP-------LI----GAGIADLIQ----PNTRLIWLEAPGSVTMEVP----DVPAITAAARARGVVTAIDN 187 (394)
T ss_pred hcCeEEEEECC-------CC----HHHHHHhcC----CCCeEEEEECCCCCCccHh----hHHHHHHHHHHcCCEEEEEC
Confidence 11333322211 11 245666654 2567788886666655444 49999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccCC--cccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNG--IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G--~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L 368 (447)
+|.- |......+ +| .|+++ ++|.+++| .+.|++++ ++++++.+.........+.+|..+..++..|
T Consensus 188 a~a~----~~~~~~l~-~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l 258 (394)
T PRK07050 188 TYSA----GLAFKPFE-HG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGL 258 (394)
T ss_pred Cccc----ccccCHHH-cC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCC
Confidence 9852 21111111 23 48774 78999854 67888776 5777766543221122344566655544433
No 267
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.48 E-value=1.1e-11 Score=126.70 Aligned_cols=311 Identities=14% Similarity=0.081 Sum_probs=165.0
Q ss_pred cCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHH
Q 013235 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELA 174 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~A 174 (447)
..|..||||.+-.++ ..+.+++.+++.... ..| .+....+|++.++++++ .+.+++++||++|+..+
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd---~~Y~~~~g~~~Leeaia~~~g--~~~vv~t~~Gt~Al~la 84 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGD---EAYAGSKSFYDLEDAVQDLFG--FKHIIPTHQGRGAENIL 84 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCC---CccCCCCCHHHHHHHHHHHHC--CCeEEEcCCHHHHHHHH
Confidence 457789999875543 244444455554331 123 35667899999999994 57899999999999999
Q ss_pred HHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCC----cCCCCC--CChHHHHHHHHHHHH
Q 013235 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP----YRGVFG--ADGEMYAKDVQDLID 248 (447)
Q Consensus 175 ik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~----~~~~~~--~d~~~~~~~le~~i~ 248 (447)
++... .+++ +|...+.|...........+.. ..++.... ...+|. -| .++|++.+.
T Consensus 85 ~~al~--~pGD-~V~~~~~f~~~~~~i~~~Ga~p-----------v~v~i~~~~~~~~~~pf~gniD----~e~Le~~I~ 146 (431)
T cd00617 85 FSILL--KPGR-TVPSNMHFDTTRGHIEANGAVP-----------VDLVIDEAHDAQELIPFKGNID----VAKLEKLID 146 (431)
T ss_pred HHHhC--CCCC-EEccCCcccchHHHHHhCCCEe-----------EEEecccccccccccCCCCCcC----HHHHHHHhC
Confidence 87542 2334 4444555543322222211111 11111000 011222 34 678888886
Q ss_pred ccCCCCeEEEEEc-cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCc----------cccCCCcccc-cccCCC
Q 013235 249 FGTSGHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF----------ARTGSHFWGF-EAHGVV 316 (447)
Q Consensus 249 ~~~~~~~aavi~E-pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGf----------gr~G~~~~~~-~~~gv~ 316 (447)
....+++++|+++ |.+..+|. +.+.+.+++|.++|++||+.||.|+++.-. |..+....-. -...-.
T Consensus 147 ~~~~~~~~~I~v~~p~N~~gG~-~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~ 225 (431)
T cd00617 147 EVGAENIPYIVLTITNNTAGGQ-PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSY 225 (431)
T ss_pred cccCCCccEEEEECCcCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhcc
Confidence 4433457777776 45545565 457888999999999999999999996521 1111111000 000113
Q ss_pred CCEEEee--ccccCCcccc-ccccCH-HHHHhhcCC----cccccCCCC-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 013235 317 PDIVTMA--KGIGNGIPLG-AVVTTP-EIAEVLTRR----NYFNTFGGN-PVCTAAGHAVLKVIQKDKLQNNAHVVGSYL 387 (447)
Q Consensus 317 pDivt~s--K~lg~G~pig-av~~~~-~i~~~l~~~----~~~~T~~~n-p~a~aaala~L~~i~~~~l~~~~~~~g~~l 387 (447)
-|..+|| |.. +.++| ++++++ ++++.+... ..+.|++|. +.-+++....|+...+.+.++...+..++|
T Consensus 226 sd~~~mS~~K~~--~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l 303 (431)
T cd00617 226 ADGCTMSAKKDG--LVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYL 303 (431)
T ss_pred CCEEEEEeecCC--CCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4666655 332 23444 678875 588776531 123455653 333333322665432223333333333667
Q ss_pred HHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH-hCCcee
Q 013235 388 KERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-GICALF 443 (447)
Q Consensus 388 ~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~-~~Gvlv 443 (447)
.+.|++. ..+++ .+..|.++.++...--....++.-...+++.+|+ +.||.+
T Consensus 304 ~~~L~~~--G~~v~--~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~ 356 (431)
T cd00617 304 GDRLDEA--GVPIV--EPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRA 356 (431)
T ss_pred HHHHHHC--CCCcc--CCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeE
Confidence 6777665 33332 3445667777654210000001001445665554 456764
No 268
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.48 E-value=2.9e-12 Score=131.54 Aligned_cols=165 Identities=19% Similarity=0.207 Sum_probs=116.8
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +.+++++||++|+..+++.... .+++||+....|+|........ ..
T Consensus 52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~--~Gd~Vl~~~~~y~~t~~~~~~~---------~~ 118 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQ--AGDNIVSSSYLYGGTYNLFKHT---------LK 118 (418)
T ss_pred ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHHHH---------HH
Confidence 466788889999999999853 5678999999999999975532 5678999998887643221110 00
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. +++++|++|..++++|.+.+ +++|.++|+++|+++|+||
T Consensus 119 ~~G~~v~~v~~-------~d----~~~l~~~l~----~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~ 179 (418)
T TIGR01326 119 RLGIEVRFVDP-------DD----PEEFEKAID----ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDN 179 (418)
T ss_pred HcCcEEEEECC-------CC----HHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 11333322221 13 566777664 25678889988888888876 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEE--EeeccccC-CccccccccCH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLGAVVTTP 339 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pigav~~~~ 339 (447)
++. .+.. .......+|++ +++|.+++ |.++|++++++
T Consensus 180 t~~-~~~~------~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 180 TFA-TPYL------CRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CCc-hhhc------CCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 985 2211 12223346888 57899997 89999988854
No 269
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.47 E-value=3e-12 Score=130.23 Aligned_cols=236 Identities=17% Similarity=0.121 Sum_probs=143.2
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +.+++++||++|+..++... ..+++.||+....|.+........ ..
T Consensus 56 ~r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al--~~~Gd~Vi~~~~~y~~t~~~~~~~---------~~ 122 (390)
T PRK08133 56 SRFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMAL--LQAGDHVVSSRSLFGSTVSLFEKI---------FA 122 (390)
T ss_pred ECCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCcchhHHHHHHHH---------HH
Confidence 456688899999999999854 45788999999999998754 235677887766654332211100 00
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. .++.+|++|...++.|.+.+ +++|.++|+++|+++|+||
T Consensus 123 ~~G~~v~~vd~-------~d----~~~l~~~i~----~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~ 183 (390)
T PRK08133 123 RFGIETTFVDL-------TD----LDAWRAAVR----PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDN 183 (390)
T ss_pred HcCcEEEEECC-------CC----HHHHHHhcC----cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEEC
Confidence 11332222211 12 456666664 25678889888888888876 8999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-Cccc-cccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-gav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
++... ... . ......|+++ ++|.+++ |.++ |++++++++++.+...........+|..+..++..|+.+
T Consensus 184 t~~~~-~~~-~-----pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~tl 256 (390)
T PRK08133 184 CFCTP-ALQ-Q-----PLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLETL 256 (390)
T ss_pred CCccc-ccC-C-----chhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccchH
Confidence 98422 111 1 1112347775 6799986 6777 667788877665542111122234566666665555433
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCee------------------eEeecceeEEEEEe
Q 013235 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFV 416 (447)
Q Consensus 372 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~Gl~~giel~ 416 (447)
.. ..++..++...+.+.|++ ++.+. ...|.|-|+.|++.
T Consensus 257 ~~--R~~~~~~~a~~la~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 257 SL--RMEAHSANALALAEWLEA----HPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred HH--HHHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 21 222223333444444433 32221 13467889999984
No 270
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.47 E-value=1.7e-11 Score=122.34 Aligned_cols=250 Identities=16% Similarity=0.033 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHhCCCC--CceEEEcCCHHHHHHHHHHHHHhh-----------cCCCeEEEEcCCcccCchhhhhccCCC
Q 013235 142 AIADFAEALASKMPGN--LKVVFFTNSGTEANELAIMMARLY-----------TGCNDIISLRNAYHGNAAGTMGATAQS 208 (447)
Q Consensus 142 ~~~elae~L~~~~~~~--~~~v~~~~sGseA~e~Aik~ar~~-----------t~~~~ii~~~~~yHG~~~~~~~~t~~~ 208 (447)
...++++.++++++.+ ...++|++||++|+..+++.++.. .+.+.+|+.....|.....+....+.
T Consensus 39 le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~- 117 (345)
T cd06450 39 MEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV- 117 (345)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc-
Confidence 3445556666666542 346889999999999999988642 12244666666666654433322111
Q ss_pred CccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH
Q 013235 209 NWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK 286 (447)
Q Consensus 209 ~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~ 286 (447)
.+..++... . +..| .++|++.+... ...++.++++.-..+++|.+.+ +++|.++|++
T Consensus 118 ---------~~~~v~~~~--~--~~~d----~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~ 176 (345)
T cd06450 118 ---------KVRLVPVDE--D--GRMD----PEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEK 176 (345)
T ss_pred ---------CeEEeeeCC--C--CCcC----HHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHH
Confidence 122232211 1 1134 45666666431 1113444444444555777654 9999999999
Q ss_pred hCCEEEEeccccCccccCCCcccccccCC-CCCEE--EeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHH
Q 013235 287 AGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (447)
Q Consensus 287 ~g~llI~DEv~tGfgr~G~~~~~~~~~gv-~pDiv--t~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aa 363 (447)
+|+++++|++|.++.......... ..++ ..|.+ ++.|.++++.++|+++.+ ..+
T Consensus 177 ~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------~~~ 233 (345)
T cd06450 177 YDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------ALK 233 (345)
T ss_pred hCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHhhCCCcchHHHHHH----------------------HHH
Confidence 999999999997653211000000 0111 35755 466988777777877655 222
Q ss_pred HHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCeeeE-eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhC
Q 013235 364 GHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGI 439 (447)
Q Consensus 364 ala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~ 439 (447)
..++++.+.++ +..++..++.+++.+.|.++ +.+.-+ ...+.++.+.+..+. .. .....++.+.|.++
T Consensus 234 ~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~iv~f~~~~~~---~~-~~~~~~i~~~L~~~ 305 (345)
T cd06450 234 LWATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD----PGFELLGEPNLSLVCFRLKPSV---KL-DELNYDLSDRLNER 305 (345)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceeEEEEEECCcc---hh-hHHHHHHHHHHHhc
Confidence 33344444433 34555666666776666554 222111 123456556553210 00 12345788899999
Q ss_pred Cceee
Q 013235 440 CALFF 444 (447)
Q Consensus 440 Gvlv~ 444 (447)
|+++.
T Consensus 306 g~~~~ 310 (345)
T cd06450 306 GGWHV 310 (345)
T ss_pred CCEEE
Confidence 76543
No 271
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.47 E-value=6e-12 Score=124.18 Aligned_cols=257 Identities=17% Similarity=0.189 Sum_probs=156.3
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhc-ccccc--cc---cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI-QHSTV--LY---LNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~--~~---~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~ 173 (447)
.|+|..+... -+|+|.+++...+... +..+. .+ ......+.++++++.++.+.+.|+|+++|||+|..
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 5888776443 4699999999988765 22111 11 23455678888999998878899999999999999
Q ss_pred HHHHH-Hhhc---CCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 174 AIMMA-RLYT---GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 174 Aik~a-r~~t---~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
||+-+ ..+. +++.||+ ...=|=....++.- . .....++..++.. . .+. .| +++|++.|.
T Consensus 77 aI~g~~~a~~~~~~~~HIIt-s~iEH~aVl~~~~~------L-e~~g~~Vtyl~V~-~-~G~--v~----~e~L~~al~- 139 (386)
T COG1104 77 AIKGAALAYRNAQKGKHIIT-SAIEHPAVLNTCRY------L-ERQGFEVTYLPVD-S-NGL--VD----LEQLEEALR- 139 (386)
T ss_pred HHHhhHHhhhcccCCCeEEE-cccccHHHHHHHHH------H-HhcCCeEEEeCCC-C-CCe--Ec----HHHHHHhcC-
Confidence 99953 2221 2445554 33333222222111 1 0011234444321 1 111 12 677887775
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCC
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG 329 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G 329 (447)
+++..|-+--++++.|++.| +++|.++|+++|+++.+|-||. +|+.- .+......|+++||---=+|
T Consensus 140 ---~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gkip-----i~~~~~~vD~ls~SaHK~~G 206 (386)
T COG1104 140 ---PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKIP-----IDLEELGVDLLSFSAHKFGG 206 (386)
T ss_pred ---CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCcee-----ccccccCcceEEeehhhccC
Confidence 36789999999999999999 9999999999999999999996 76542 22222336999998322223
Q ss_pred -ccccccccCHHHHHhhcCCcccccC------C-CChHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHH
Q 013235 330 -IPLGAVVTTPEIAEVLTRRNYFNTF------G-GNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 330 -~pigav~~~~~i~~~l~~~~~~~T~------~-~np~a~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l 394 (447)
=.+|++..++.+. +.+..+++.+ + -|..+.++--+++++..+ +....++..+.++|.++|.+.
T Consensus 207 pkGiGaLyv~~~~~--~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~ 279 (386)
T COG1104 207 PKGIGALYVRPGVR--LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEI 279 (386)
T ss_pred CCceEEEEECCCCc--cCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2467887766543 2211122111 1 133333333345554332 234566777777777777665
No 272
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=5.2e-11 Score=121.06 Aligned_cols=298 Identities=17% Similarity=0.155 Sum_probs=191.8
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc---c----ccccccchHHHHHHHHHHHhCCCC-CceEEEcCCHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---H----STVLYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEA 170 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~---~----~~~~~~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA 170 (447)
-.|+|..++ +..+..|.+++.+....+. | .........+.+.+++++++++.+ .+.|+|+.+.|+|
T Consensus 23 ~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 368886542 3467899999998775542 1 111223446678889999999876 4889999999999
Q ss_pred HHHHHHHHH-hhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe--EeecCCCCcCCCCCCChHHHHHHHHHHH
Q 013235 171 NELAIMMAR-LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV--HHALNPDPYRGVFGADGEMYAKDVQDLI 247 (447)
Q Consensus 171 ~e~Aik~ar-~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~--~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (447)
+........ ....++.||+.+--+|....--..+.. ..|. ..++..+ .+. .+ .++++.++
T Consensus 97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~---------~~Ga~v~~i~~~~--~g~--~~----~~~~~~~i 159 (405)
T COG0520 97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAK---------RTGAKVRVIPLDD--DGL--LD----LDALEKLI 159 (405)
T ss_pred HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHH---------hcCcEEEEEecCC--CCC--cC----HHHHHHhc
Confidence 998887442 234558899988888876654333321 1233 3333221 111 12 45666654
Q ss_pred HccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--cc
Q 013235 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (447)
Q Consensus 248 ~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~ 325 (447)
. +++..|.+.-+.+..|.+.| +++|.++|+++|+++++|-+|+ ++ +. -++-..+..|.++|| |.
T Consensus 160 ~----~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~----h~-~idv~~l~~Df~afsgHKw 225 (405)
T COG0520 160 T----PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AG----HL-PIDVQELGCDFLAFSGHKW 225 (405)
T ss_pred C----CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cC----cc-CCCchhcCCCEEEEccccc
Confidence 3 47789999999999999998 9999999999999999999996 32 11 123334456999998 86
Q ss_pred ccCCccccccccCHHHHHhhcCCc------------ccccC--------CC--ChHHHHHHHHHHHHHhhh---hHHHHH
Q 013235 326 IGNGIPLGAVVTTPEIAEVLTRRN------------YFNTF--------GG--NPVCTAAGHAVLKVIQKD---KLQNNA 380 (447)
Q Consensus 326 lg~G~pigav~~~~~i~~~l~~~~------------~~~T~--------~~--np~a~aaala~L~~i~~~---~l~~~~ 380 (447)
+.|--.+|.+.+++++.+.+.+.. ...|+ .| |.....+..++|+.+++. +..++.
T Consensus 226 l~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e 305 (405)
T COG0520 226 LLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHE 305 (405)
T ss_pred ccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHH
Confidence 765456799999999998874310 00111 11 223333334566666543 455666
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeeE----eecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 381 HVVGSYLKERLTALKDKYGIIGDV----RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 381 ~~~g~~l~~~L~~l~~~~~~i~~v----rg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
+++.+++.++|.++ +.+.-. ..++-++.+.+..- ....+...|.++||.++..
T Consensus 306 ~~L~~~~~~~L~~~----~~v~i~g~~~~~r~~~vsF~v~~~---------~~~dv~~~L~~~gI~vr~g 362 (405)
T COG0520 306 RELTEYLLEGLSEL----PGVEIYGPPDADRGGIVSFNVKGI---------HPHDVATLLDEKGIAVRAG 362 (405)
T ss_pred HHHHHHHHHHHhcC----CCeEEecCCcccCceEEEEEeCCC---------CHHHHHHHHHhCCeEEEec
Confidence 66666666666554 322211 12455666665321 1467888999999888753
No 273
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.47 E-value=1.8e-11 Score=124.08 Aligned_cols=277 Identities=12% Similarity=0.080 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 118 p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
++-.+++.+.+...... ...+...++++.|++.++ .+++++++||++|+..++..+. ...++.||+...+|.+.
T Consensus 11 ~~~~~~~~~~l~~~~~~---g~~~~~~~~e~~la~~~g--~~~~v~~~sgt~al~~~l~~~~-~~~Gd~Viv~~~t~~~~ 84 (375)
T PRK11706 11 GTELDYIQQAMSSGKLC---GDGGFTRRCQQWLEQRFG--SAKVLLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVST 84 (375)
T ss_pred HHHHHHHHHHHHcCCcc---CCCHHHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHhC-CCCCCEEEECCCCcHHH
Confidence 34456676666654221 124566788888998874 4789999999999999887542 23567899988888755
Q ss_pred chhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChH
Q 013235 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (447)
Q Consensus 198 ~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l 277 (447)
....... |...+..+... ..|..| .+++++.+.. ++.+|++- + ..|.... +
T Consensus 85 ~~~~~~~-------------G~~~v~~d~d~-~~~~~d----~~~le~~i~~----~tk~i~~~--~-~~G~~~~----~ 135 (375)
T PRK11706 85 ANAFVLR-------------GAKIVFVDIRP-DTMNID----ETLIEAAITP----KTRAIVPV--H-YAGVACE----M 135 (375)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCcC----HHHHHHhcCC----CCeEEEEe--C-CCCCccC----H
Confidence 4433222 22222221111 112234 5667776642 34555532 2 3565544 8
Q ss_pred HHHHHHHHHhCCEEEEeccccCccc-cCCCcccccccCCCCCEEEee----ccccCCccccccccCHHHHHhhcCCc-c-
Q 013235 278 PAVYKSIKKAGGLCIADEVQAGFAR-TGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTTPEIAEVLTRRN-Y- 350 (447)
Q Consensus 278 ~~l~~l~~~~g~llI~DEv~tGfgr-~G~~~~~~~~~gv~pDivt~s----K~lg~G~pigav~~~~~i~~~l~~~~-~- 350 (447)
++|.++|+++|+++|.|++|+ +|. .+ -...|-.-|+.+|| |.++.|...++++.++++++.+.... +
T Consensus 136 ~~i~~la~~~~i~vIeD~a~a-~g~~~~-----~~~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g 209 (375)
T PRK11706 136 DTIMALAKKHNLFVVEDAAQG-VMSTYK-----GRALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKG 209 (375)
T ss_pred HHHHHHHHHcCCEEEEECccc-cccccC-----CeeeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcC
Confidence 999999999999999999996 442 11 01123334888988 99976655455666777776432210 0
Q ss_pred -------------------cccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH----hcCC-eeeEee
Q 013235 351 -------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD----KYGI-IGDVRG 406 (447)
Q Consensus 351 -------------------~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~-i~~vrg 406 (447)
+.++--+.+.++.+++.|+.++ +..++-+++.+++++.|..+.. .++. ......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~--~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 287 (375)
T PRK11706 210 TNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAAD--RINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKH 287 (375)
T ss_pred CCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCce
Confidence 1122224567777777787653 3445556666667776665421 0110 011111
Q ss_pred cceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 407 ~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
...++.+.+.+. ....++.+.|.++||.++.
T Consensus 288 ~~~~~~~~~~~~--------~~r~~l~~~L~~~gI~~~~ 318 (375)
T PRK11706 288 NAHMFYIKLRDL--------EDRSALINFLKEAGIMAVF 318 (375)
T ss_pred eeEEEEEEECCc--------CCHHHHHHHHHHCCCCccc
Confidence 122344444211 1246899999999998753
No 274
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.47 E-value=2.3e-12 Score=114.31 Aligned_cols=167 Identities=23% Similarity=0.213 Sum_probs=112.7
Q ss_pred HHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEee
Q 013235 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHA 222 (447)
Q Consensus 143 ~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~ 222 (447)
+.++.+++++.++.+.+.+++++||++|++.+++.++. .+++|++.++.||+......... +....
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~------------g~~~~ 67 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--PGDEVIVDANGHGSRYWVAAELA------------GAKPV 67 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--CCCEEEEeecccceehhhHHHhc------------CCEEE
Confidence 35788888888854567789999999999999997753 36789999999988763221111 22222
Q ss_pred cCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccc
Q 013235 223 LNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR 302 (447)
Q Consensus 223 ~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr 302 (447)
..+.........+ .+.+++. ....+++++++++.++++|...+ +++|.++|+++|+++|+||++.++..
T Consensus 68 ~v~~~~~~~~~~~----~~~~~~~---~~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~ 136 (170)
T cd01494 68 PVPVDDAGYGGLD----VAILEEL---KAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGAS 136 (170)
T ss_pred EeccCCCCccchh----hhhhhhc---cccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccc
Confidence 2211110000000 1123222 22458899999999999888776 59999999999999999999998765
Q ss_pred cCCCcccccccCCCCCEEEee--ccccCCccccccccC
Q 013235 303 TGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT 338 (447)
Q Consensus 303 ~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~ 338 (447)
... . .......+|+++.| |.+++ .+.|+++++
T Consensus 137 ~~~-~--~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 137 PAP-G--VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccc-c--cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 431 2 12223458999888 99987 677877653
No 275
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.46 E-value=8.3e-12 Score=126.68 Aligned_cols=235 Identities=18% Similarity=0.111 Sum_probs=148.3
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +.+++++||++|+..++... ...++.|++...+|++.......+ .
T Consensus 48 ~r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~l--l~~GD~Vlv~~~~y~~~~~~~~~~-~--------- 113 (385)
T PRK08574 48 SREENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSL--LKAGDRVVLPMEAYGTTLRLLKSL-E--------- 113 (385)
T ss_pred ECCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchhHHHHHHHh-h---------
Confidence 455678888999999999854 45678899999999998744 335678888888886644322211 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..++...... .| .+++++.+.. .++.+|++|...++.|.+.+ +++|.++|+++|+++|+||
T Consensus 114 ~~g~~v~~~~--------~d----~~~l~~~i~~---~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~ 174 (385)
T PRK08574 114 KFGVKVVLAY--------PS----TEDIIEAIKE---GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDN 174 (385)
T ss_pred ccCcEEEEEC--------CC----HHHHHHhcCc---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEEC
Confidence 0122211110 12 4567766642 25678889988888898886 8999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-Cccc-ccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPL-GAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-gav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
++. .+-.. + ..+ +| .|+++ ++|.++| |-.+ |++++ ++++.+.+...........+|..++.++..|+.
T Consensus 175 t~a-~~~~~-~--~l~-~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t 247 (385)
T PRK08574 175 TFA-TPLLY-R--PLR-HG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT 247 (385)
T ss_pred CCC-ccccC-C--hhh-hC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc
Confidence 984 22111 1 111 33 47775 6799975 4443 53554 677776654322222334568888888777766
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee------------------E--eecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------V--RGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------v--rg~Gl~~giel~ 416 (447)
+.. ..++..++..++.+.|++ ++.+.. . .|.|-|+.|++.
T Consensus 248 L~~--R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~ 307 (385)
T PRK08574 248 LEV--RFERQCRNAMAIAEFLSE----HPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVK 307 (385)
T ss_pred HHH--HHHHHHHHHHHHHHHHHc----CCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeC
Confidence 532 333344455555555543 332221 1 257889999995
No 276
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.45 E-value=3e-12 Score=129.38 Aligned_cols=255 Identities=15% Similarity=0.089 Sum_probs=153.2
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
+..+|...+|+++|+++.+. +.+++++||++|+.+++... ...++.||+.++.|++.....-... ..
T Consensus 46 r~gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~al--l~~GD~Vl~~~~~y~~t~~~~~~~~---------~~ 112 (377)
T TIGR01324 46 RRGTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAF--VKAGDHVLMVDSAYEPTRYFCDIVL---------KR 112 (377)
T ss_pred CCCCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHh--cCCCCEEEEcCCCcHHHHHHHHHHH---------Hh
Confidence 34567788899999998753 56889999999999999744 3356788889999986433211100 00
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.++...... + .+ .+++++.+. .++.+|++|.+.++.|.+.+ +++|.++|+++|+++|+||+
T Consensus 113 ~gi~v~~~d-~------~~----~e~l~~~i~----~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t 173 (377)
T TIGR01324 113 MGVDITYYD-P------LI----GEDIATLIQ----PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNT 173 (377)
T ss_pred cCcEEEEEC-C------CC----HHHHHHhcC----CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECC
Confidence 122211110 0 11 245666554 25678999988888887776 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCCEEE--eeccccC--CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ 372 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~ 372 (447)
|. +|... + -.....|+++ ++|.++| +.-.|+++++++..+.+...........+|..+...+..|+.+.
T Consensus 174 ~a-~g~~~-~-----pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~ 246 (377)
T TIGR01324 174 WA-AGLLF-K-----PLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLG 246 (377)
T ss_pred Cc-ccccc-C-----ccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHH
Confidence 96 33322 1 1123458886 4799985 36678888888877665532222222345766666666665442
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH---H-hcCCe----------eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHh
Q 013235 373 KDKLQNNAHVVGSYLKERLTALK---D-KYGII----------GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKG 438 (447)
Q Consensus 373 ~~~l~~~~~~~g~~l~~~L~~l~---~-~~~~i----------~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~ 438 (447)
- .+++..+....+.+.|++-. + .|+.+ ....|.|-|+.|++... ..+.+.+|++.|.-
T Consensus 247 ~--R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~------~~~~~~~~~~~l~~ 318 (377)
T TIGR01324 247 V--RLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL------TQKQVHAFLDHLQL 318 (377)
T ss_pred H--HHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC------CHHHHHHHHHhCCc
Confidence 1 12333333333333333210 0 11111 11236788999998521 12345667776653
No 277
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.45 E-value=1.4e-11 Score=125.06 Aligned_cols=278 Identities=13% Similarity=0.090 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 118 p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
++-.+++.+.++.... +..+...+|+++|++++.. +.+++++||++|+.++++... ...+++||+...+|.+.
T Consensus 14 ~~e~~~~~~~l~~~~~----~~g~~~~~le~~la~~~g~--~~~v~~~sgt~al~lal~al~-~~~Gd~Viv~~~~~~~~ 86 (379)
T PRK11658 14 DEELAAVKEVLRSGWI----TTGPKNQALEQAFCQLTGN--QHAIAVSSATAGMHITLMALG-IGPGDEVITPSLTWVST 86 (379)
T ss_pred HHHHHHHHHHHHcCCc----cCCHhHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcC-CCCCCEEEECCCcHHHH
Confidence 5567777777765422 3467788999999999854 567889999999999997542 23567899989888765
Q ss_pred chhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChH
Q 013235 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (447)
Q Consensus 198 ~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l 277 (447)
....... |...+..+... ..|..| .+++++.+. + ++.+|+ |++. .|...+ +
T Consensus 87 ~~~~~~~-------------G~~~v~vd~~~-~~~~~d----~~~l~~~i~---~-~tkav~--~~~~-~G~~~d----~ 137 (379)
T PRK11658 87 LNMIVLL-------------GATPVMVDVDR-DTLMVT----PEAIEAAIT---P-RTKAII--PVHY-AGAPAD----L 137 (379)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCcC----HHHHHHhcc---c-CCeEEE--EeCC-CCCcCC----H
Confidence 4332211 22222222111 112223 566777664 2 445555 3332 455544 8
Q ss_pred HHHHHHHHHhCCEEEEecccc-CccccCCCcccccccCCCCCEEEee--ccccCCccccccccC-HHHHHhhcCCc-c--
Q 013235 278 PAVYKSIKKAGGLCIADEVQA-GFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT-PEIAEVLTRRN-Y-- 350 (447)
Q Consensus 278 ~~l~~l~~~~g~llI~DEv~t-Gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~-~~i~~~l~~~~-~-- 350 (447)
++|.++|+++|+++|+|++|+ |.-..| .. ...+|. ++.+|+ |.+++| +-|+++++ +++.+.+.... +
T Consensus 138 ~~i~~~a~~~gi~vi~D~a~a~g~~~~~-~~--~g~~g~--~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~ 211 (379)
T PRK11658 138 DAIRAIGERYGIPVIEDAAHAVGTYYKG-RH--IGARGT--AIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGL 211 (379)
T ss_pred HHHHHHHHHcCCeEEEECCCccCCeECC-ee--cCCCCC--EEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCC
Confidence 999999999999999999997 332223 11 122343 666666 777654 45666764 67765543210 0
Q ss_pred ---------------------cccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCeeeEeecc
Q 013235 351 ---------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDK-YGIIGDVRGRG 408 (447)
Q Consensus 351 ---------------------~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~-~~~i~~vrg~G 408 (447)
+..+.-+.+..|.++..|+.++ +..++-+++.+++++.|.++.-. ...... .+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~--~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~-~~~~ 288 (379)
T PRK11658 212 GVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLE--ALNARRREIAARYLQALADLPFQPLSLPAW-PHQH 288 (379)
T ss_pred CcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCCccCcCCCC-CCce
Confidence 0112234566666667776553 35677777788888877664100 000000 0111
Q ss_pred --eeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 409 --FLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 409 --l~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+..+.+.... ......++.+.|.++||-++.
T Consensus 289 ~~~~~~~~~~~~~-----~~~~r~~~~~~L~~~gI~~~~ 322 (379)
T PRK11658 289 AWHLFIIRVDEER-----CGISRDALMEALKERGIGTGL 322 (379)
T ss_pred eEEEEEEEECCcc-----ccCCHHHHHHHHHHCCCCCcc
Confidence 12223332110 001246789999999987653
No 278
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.45 E-value=1.3e-11 Score=125.89 Aligned_cols=236 Identities=19% Similarity=0.117 Sum_probs=148.7
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +..++++||++|+..++... ...++.|++..++|++......... .
T Consensus 55 ~R~~~p~~~~Le~~lA~l~g~--~~~v~~~sG~~Ai~~~l~al--l~pGD~Vvv~~p~Y~~t~~~~~~~~---------~ 121 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGG--AGGVITATGMGAINLVLNAL--LQPGDTLVVPHDAYGGSWRLFNALA---------K 121 (405)
T ss_pred cCCCChHHHHHHHHHHHHhCC--CceEEEcCHHHHHHHHHHHH--hCCCCEEEEccCCchHHHHHHHHHH---------H
Confidence 567788888999999998754 33467888999998888754 2356789998999975332111110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..++..+..+. .| .+++++.+. + ++.+|++|..+++.|.+.. +++|.++|+++|+++|+||
T Consensus 122 ~~g~~v~~v~~-------~d----~~~l~~~i~---~-~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~ 182 (405)
T PRK08776 122 KGHFALITADL-------TD----PRSLADALA---Q-SPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDN 182 (405)
T ss_pred hcCcEEEEECC-------CC----HHHHHHhcC---c-CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEEC
Confidence 11233222221 12 456666664 2 4567777776777887755 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC--Ccccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
+|..-... ...+ ...|+++ .+|.+++ ++..|++++ ++++.+.+........+..+|+.+.+.+..|+.
T Consensus 183 a~a~~~~~----~pl~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~t 255 (405)
T PRK08776 183 TFLSPALQ----KPLE---FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRT 255 (405)
T ss_pred CCcccccC----Cccc---ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCc
Confidence 98632111 1111 2348875 5599974 366787766 567766554322223345689999888877776
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee------------------eEeecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~Gl~~giel~ 416 (447)
++. ..++..++...+.+.|++ ++.+. ...|.|-|+.|++.
T Consensus 256 l~~--r~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 256 LDA--RLRVHQENADAIAALLDG----HAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred HHH--HHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 532 344444455554444443 23222 12577889999995
No 279
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.45 E-value=5.6e-12 Score=128.21 Aligned_cols=241 Identities=16% Similarity=0.067 Sum_probs=152.4
Q ss_pred cccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 135 ~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
..+|.++...+|+++|+++... +.+++++||++|+..++... ...++.|++..+.|.+.........
T Consensus 53 y~r~~~p~~~~le~~lA~l~g~--~~av~~~sG~~Ai~~~l~al--~~~Gd~Vi~~~~~y~~t~~~~~~~~--------- 119 (391)
T TIGR01328 53 YSRLGNPTVSNLEGRIAFLEGT--EAAVATSSGMGAIAATLLTI--LKAGDHLISDECLYGCTFALLEHAL--------- 119 (391)
T ss_pred eeCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEecCcchHHHHHHHHHH---------
Confidence 3567788889999999999854 45788999999999888644 2356778887776643322111110
Q ss_pred cCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
...|+.....+. .| .+++++.+. + ++.+|++|...++.|.+.+ +++|.++|+++|+++|+|
T Consensus 120 ~~~G~~~~~vd~-------~d----~e~l~~~i~---~-~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD 180 (391)
T TIGR01328 120 TKFGIQVDFINM-------AI----PEEVKAHIK---D-NTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVD 180 (391)
T ss_pred hcCCeEEEEECC-------CC----HHHHHHhhc---c-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEE
Confidence 011333222211 12 456666654 2 5678888887888888776 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEE--eeccccC-Ccc-ccccccCHHHHHhhcCCcc--cccCCCChHHHHHHHHHH
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIP-LGAVVTTPEIAEVLTRRNY--FNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~p-igav~~~~~i~~~l~~~~~--~~T~~~np~a~aaala~L 368 (447)
|++. .+..+ . ..+...|+++ ++|.+++ |.+ .|++++++++++.+..... ......+|..++.++..|
T Consensus 181 ~a~a-~~~~~-~-----~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L 253 (391)
T TIGR01328 181 NTFA-TPMLT-N-----PVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGL 253 (391)
T ss_pred CCCc-hhccC-C-----chhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCc
Confidence 9985 22222 1 1223467775 6799985 655 5778888998876653211 112334677888777777
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHH----hcCCe----------eeEeecceeEEEEEe
Q 013235 369 KVIQKDKLQNNAHVVGSYLKERLTALKD----KYGII----------GDVRGRGFLLGVEFV 416 (447)
Q Consensus 369 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i----------~~vrg~Gl~~giel~ 416 (447)
+.+. ...++..++.+++.+.|++... .||.. ...+|.|-|+.|++.
T Consensus 254 ~tl~--~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~ 313 (391)
T TIGR01328 254 KTLN--IRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK 313 (391)
T ss_pred CcHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence 5543 2345556666666666654310 01111 113466889999984
No 280
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.45 E-value=5.1e-12 Score=128.94 Aligned_cols=252 Identities=13% Similarity=0.076 Sum_probs=159.1
Q ss_pred ccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccc
Q 013235 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (447)
Q Consensus 134 ~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~ 213 (447)
...+|+++...+|+++|+++... +.+++++||++|+..++... ...++.||+..+.|. .+.......
T Consensus 57 ~Y~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~l--l~~Gd~Vl~~~~~y~-~~~~~~~~~-------- 123 (400)
T PRK06234 57 IYSRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSA--LKAGDHVVASDTLYG-CTFALLNHG-------- 123 (400)
T ss_pred cccCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHH--hCCCCEEEEecCccc-hHHHHHHHH--------
Confidence 34566788899999999999864 46789999999999888633 235577887776654 333222100
Q ss_pred ccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHh--CCEE
Q 013235 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA--GGLC 291 (447)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~--g~ll 291 (447)
....|+.....+. .| .+++++.+.. ++.+|++|...+++|.+.+ +++|.++|+++ |+++
T Consensus 124 ~~~~G~~v~~vd~-------~d----~e~l~~~i~~----~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~l 184 (400)
T PRK06234 124 LTRYGVEVTFVDT-------SN----LEEVRNALKA----NTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLV 184 (400)
T ss_pred HhhCCeEEEEECC-------CC----HHHHHHHhcc----CCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEE
Confidence 0011333322221 13 4667776642 4678888888888888776 99999999997 9999
Q ss_pred EEeccccCccccCCCcccccccCCCCCEEE--eeccccC-Cccc-cccccCHHHHHhhcCC--cccccCCCChHHHHHHH
Q 013235 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPL-GAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGH 365 (447)
Q Consensus 292 I~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-gav~~~~~i~~~l~~~--~~~~T~~~np~a~aaal 365 (447)
|+||++... ..+ .. .+...|+++ ++|.+++ |.++ |++++++++++.+... ....+...+|..++.++
T Consensus 185 ivDea~~~~-~~~-~~-----l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~ 257 (400)
T PRK06234 185 FVDNTFCTP-YIQ-RP-----LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLII 257 (400)
T ss_pred EEECCCCch-hcC-Cc-----hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 999998632 222 11 122457775 6799986 6665 8899999988876532 11234556788888888
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee------------------EeecceeEEEEEeeCCCCCCCCHH
Q 013235 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFVTDRQLKTPAKA 427 (447)
Q Consensus 366 a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~Gl~~giel~~~~~~~~p~~~ 427 (447)
..|+.+. ...++..++..++.+.|++ ++.+.. ..|.|-|+.|++..+ .+
T Consensus 258 ~~l~tl~--~r~~~~~~na~~~a~~L~~----~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~-------~~ 324 (400)
T PRK06234 258 RGMKTLQ--IRMEKHCKNAMKVAKFLES----HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG-------VE 324 (400)
T ss_pred hccCcHH--HHHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc-------HH
Confidence 7776442 2334444555555555543 232211 235677888988422 12
Q ss_pred HHHHHHHHHH
Q 013235 428 ETLYIMDKMK 437 (447)
Q Consensus 428 ~~~~~~~~l~ 437 (447)
.+.+|.+.|.
T Consensus 325 ~~~~f~~~l~ 334 (400)
T PRK06234 325 EGKVVMNNVK 334 (400)
T ss_pred HHHHHHHhCC
Confidence 3456666554
No 281
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.45 E-value=1.3e-11 Score=125.58 Aligned_cols=236 Identities=19% Similarity=0.092 Sum_probs=146.3
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++... +..+.++||++|+.++++... ..+++||+..+.|.+......... .
T Consensus 56 ~r~~~p~~~~Le~~lA~~~g~--~~~i~~~sG~~Ai~~~l~all--~~Gd~Vl~~~~~y~~t~~~~~~~~---------~ 122 (388)
T PRK07811 56 ARTGNPTRTALEEQLAALEGG--AYGRAFSSGMAATDCLLRAVL--RPGDHIVIPNDAYGGTFRLIDKVF---------T 122 (388)
T ss_pred cCCCCccHHHHHHHHHHHhCC--CceEEeCCHHHHHHHHHHHHh--CCCCEEEEcCCCchHHHHHHHHhC---------c
Confidence 456678889999999999854 334566899999999997653 356789998888864332211110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..++.....+. .| .+++++.+.. ++.+|++|...++.|.+.. +++|.++|+++|+++|+||
T Consensus 123 ~~gi~~~~~d~-------~d----~e~l~~~i~~----~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~ 183 (388)
T PRK07811 123 RWGVEYTPVDL-------SD----LDAVRAAITP----RTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDN 183 (388)
T ss_pred CCCeEEEEeCC-------CC----HHHHHHhcCc----CCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEEC
Confidence 11332222111 12 4667666642 5678888877777777765 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-C-ccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
++... ..+ . ..+...|+++ ++|.+++ | ...|+++++ +++.+.+...........+|..+..++..|+.
T Consensus 184 a~a~~-~~~-~-----p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t 256 (388)
T PRK07811 184 TFASP-YLQ-Q-----PLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT 256 (388)
T ss_pred CCCcc-ccC-C-----chhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence 98632 222 1 1123458775 6699986 3 567887765 66665544211111223457776666666654
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee------------------EeecceeEEEEEe
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~Gl~~giel~ 416 (447)
+. ...++..++...+.+.|++ ++.+.. ..|.|-|+.|+|.
T Consensus 257 l~--~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 257 LA--VRMDRHSENAEAVAEFLAG----HPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred HH--HHHHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 32 2334444555555555543 333321 2467889999995
No 282
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.44 E-value=2.8e-11 Score=117.81 Aligned_cols=284 Identities=20% Similarity=0.228 Sum_probs=169.0
Q ss_pred CCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q 013235 115 HCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194 (447)
Q Consensus 115 h~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~y 194 (447)
|+.|...+|+++-+....- + ...-+.+++.++++++.|||..+..... +++..++..+-|
T Consensus 121 ~Gl~~frqa~A~Fm~~~r~--~----------------~v~fdP~~~Vv~~G~T~ane~l~fcLad--pgdafLvPtPyY 180 (471)
T KOG0256|consen 121 HGLPSFRQAVAEFMERARG--N----------------RVKFDPERVVVTNGATSANETLMFCLAD--PGDAFLVPTPYY 180 (471)
T ss_pred cCchHHHHHHHHHHHHHhC--C----------------CCccCccceEEecccchhhHHHHHHhcC--CCceeeecCCCC
Confidence 6678888888777765411 0 1112456788999999999987754332 567778888888
Q ss_pred ccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCC
Q 013235 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAP 274 (447)
Q Consensus 195 HG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~ 274 (447)
-|..... .|+ .|+..+|..-.....|..+.+.+.+++++..... .++.++|+---+++=|.+ .++
T Consensus 181 ~gfdrdl-------~~r-----Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~--~kVkGvlitNPsNPLG~~-~~~ 245 (471)
T KOG0256|consen 181 PGFDRDL-------RWR-----TGVEIVPVHCSSSNGFQITVEALEAALNQARKLG--LKVKGVLITNPSNPLGTT-LSP 245 (471)
T ss_pred Ccccccc-------eec-----cCceEEEEEeecCCCccccHHHHHHHHHHHHHhC--CceeEEEEeCCCCCCCCc-cCH
Confidence 6663221 111 3666666543333445556555555666555432 356655554334444444 478
Q ss_pred ChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cc---cCCCCCEE----Eeecccc-CCccccccccC-HHHHHh
Q 013235 275 GYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EA---HGVVPDIV----TMAKGIG-NGIPLGAVVTT-PEIAEV 344 (447)
Q Consensus 275 ~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~---~gv~pDiv----t~sK~lg-~G~pigav~~~-~~i~~~ 344 (447)
+-|..+.+.+.++++-+|+||||+|--...++|-.+ +. ....||-| .+||=+| .|+++|++... +++...
T Consensus 246 e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vvsa 325 (471)
T KOG0256|consen 246 EELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSA 325 (471)
T ss_pred HHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHH
Confidence 889999999999999999999999843333234333 21 12256644 6899999 79999999865 555554
Q ss_pred hcCCcccccCC-CChHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEE
Q 013235 345 LTRRNYFNTFG-GNPVCTAAGHAVLKVIQKDKLQ--------NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415 (447)
Q Consensus 345 l~~~~~~~T~~-~np~a~aaala~L~~i~~~~l~--------~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel 415 (447)
..+- +.|+ .++..+-....-| .++.+. .+++..-+++-++|+++ ++..--++.|+|+++++
T Consensus 326 A~km---ssf~~vSs~tQ~~la~LL---SD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l----gI~cl~s~AGlF~wvDl 395 (471)
T KOG0256|consen 326 ATKM---SSFGLVSSQTQYLLASLL---SDEEFTREYLRENNKRLRIRHRYIVEGLKAL----GIPCLKSNAGLFCWVDL 395 (471)
T ss_pred HHHH---hhccCCcHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHHhhHHhc----CCceeecCCeeEEEEEh
Confidence 4432 3333 2344444333333 333322 23333334444445444 55556688899999999
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHhC-Cceeec
Q 013235 416 VTDRQLKTPAKAETLYIMDKMKGI-CALFFS 445 (447)
Q Consensus 416 ~~~~~~~~p~~~~~~~~~~~l~~~-Gvlv~~ 445 (447)
..-=.+.+- +.-.++++.++++ +|.+.+
T Consensus 396 r~lL~s~tf--e~El~Lw~~i~~~vklnlSp 424 (471)
T KOG0256|consen 396 RKLLTSLTF--EGELELWERILDNVKLNLSP 424 (471)
T ss_pred HHhcCcCCh--HHHHHHHHHHHHhhccccCC
Confidence 532111111 1123577777777 877764
No 283
>PRK05968 hypothetical protein; Provisional
Probab=99.44 E-value=7.9e-12 Score=127.08 Aligned_cols=251 Identities=17% Similarity=0.093 Sum_probs=153.6
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++++++.+. +..++++||+.|+..++... ...+++||+....|++........ ..
T Consensus 58 ~r~~~p~~~~le~~lA~l~g~--~~av~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~~y~~t~~~~~~~---------~~ 124 (389)
T PRK05968 58 SRGDNPTVRAFEEMLAKLEGA--EDARGFASGMAAISSTVLSF--VEPGDRIVAVRHVYPDAFRLFETI---------LK 124 (389)
T ss_pred cCCCChhHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHH---------HH
Confidence 456678889999999999854 34566799999999988643 335678999988887543211110 00
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. ++.+|++|...+..+.+. -+++|.++|+++|+++|+|+
T Consensus 125 ~~G~~v~~vd~-------~d----~~~l~~~i~-----~tklV~ie~pt~~~~~~~----dl~~i~~la~~~gi~vivD~ 184 (389)
T PRK05968 125 RMGVEVDYVDG-------RD----EEAVAKALP-----GAKLLYLESPTSWVFELQ----DVAALAALAKRHGVVTMIDN 184 (389)
T ss_pred HcCceEEEeCC-------CC----HHHHHHhcc-----cCCEEEEECCCCCCCcHH----HHHHHHHHHHHcCCEEEEEC
Confidence 11222221110 12 456666552 345777886555544443 49999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-C-ccccccccCHHHHHhhcCCcc-cccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTTPEIAEVLTRRNY-FNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~~~~~i~~~l~~~~~-~~T~~~np~a~aaala~L~~ 370 (447)
++..+. .. . ..+ +| .|+++ ++|.+++ | ...|+++.++++++.+..... ..-...+|..++.++..|+.
T Consensus 185 a~a~~~-~~-~--p~~-~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t 257 (389)
T PRK05968 185 SWASPV-FQ-R--PIT-LG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT 257 (389)
T ss_pred CCcchh-cc-C--chh-cC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc
Confidence 985331 11 1 111 23 37775 6799986 3 567888889988776653211 11123468888887777765
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe-------------ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHH
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR-------------GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-------------g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~ 437 (447)
+ +...++-.+..+++.+.|++ ++.+..|. |.|.|+.+++.+ ...+.++++.|.
T Consensus 258 l--~~r~~~~~~~a~~la~~L~~----~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--------~~~~~~f~~~L~ 323 (389)
T PRK05968 258 L--PLRMKAHEASALEIARRLKA----HPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--------GIDVRAFADALK 323 (389)
T ss_pred H--HHHHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCChHHhCCCCceEEEEEECC--------HHHHHHHHHhCC
Confidence 5 22333344446666665544 44444443 667788899842 123456777765
Q ss_pred hCC
Q 013235 438 GIC 440 (447)
Q Consensus 438 ~~G 440 (447)
..+
T Consensus 324 ~~~ 326 (389)
T PRK05968 324 LFR 326 (389)
T ss_pred ccE
Confidence 544
No 284
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.43 E-value=5.7e-11 Score=123.38 Aligned_cols=293 Identities=13% Similarity=0.011 Sum_probs=156.1
Q ss_pred CCCHHHHHHHHHHH-Hhccccc--cccc--chHHHHH---HHH-HHHhCCCCCceEEE---cCCHHHHHHHHHHHHHhhc
Q 013235 115 HCHPYVVDSIVNQI-KRIQHST--VLYL--NHAIADF---AEA-LASKMPGNLKVVFF---TNSGTEANELAIMMARLYT 182 (447)
Q Consensus 115 h~~p~v~~A~~~~l-~~~~~~~--~~~~--~~~~~el---ae~-L~~~~~~~~~~v~~---~~sGseA~e~Aik~ar~~t 182 (447)
+..|.|.+|+...+ +++..+. .+|. +..+.++ +.+ ..+.+....+.+.+ .+||+.||.+++.... .
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--~ 122 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--Q 122 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--C
Confidence 35689999998888 6654322 2222 2233333 332 34445443333322 3899999999997543 2
Q ss_pred CCCeEEEEcCC-----cccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEE
Q 013235 183 GCNDIISLRNA-----YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (447)
Q Consensus 183 ~~~~ii~~~~~-----yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aa 257 (447)
+++.|++.+-. .|++......++....+ +..++++.... ....| .++|++++.+.. +..
T Consensus 123 pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~--------~~~~~y~~~~~-~g~iD----~d~Le~~l~~~~---pkl 186 (475)
T PLN03226 123 PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIY--------FESMPYRLDES-TGLID----YDKLEKKAMLFR---PKL 186 (475)
T ss_pred CCCEEEECCCCcCcchhhhhhhcccccccceEE--------EEeeeeeecCC-CCCcC----HHHHHHHHhhcC---CeE
Confidence 56777764431 13322211111111000 01111100000 00013 678888776432 334
Q ss_pred EEE-ccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccCCccccc
Q 013235 258 FLS-ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNGIPLGA 334 (447)
Q Consensus 258 vi~-Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~piga 334 (447)
||+ +.+.++ ..+ +++|+++|+++|++|++|++|. +|-.+..... ..++ ..|+++ +.|+|.|-. =|+
T Consensus 187 Iv~~~S~~s~---~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~-~p~~-~~Div~~t~hK~L~GP~-Gg~ 255 (475)
T PLN03226 187 IIAGASAYPR---DWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAA-SPFE-YCDVVTTTTHKSLRGPR-GGM 255 (475)
T ss_pred EEEecCcCCC---ccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCC-CCCC-CCeEEEecCcccccCCC-ceE
Confidence 455 655443 233 7899999999999999999995 6554422211 1122 468885 669995411 145
Q ss_pred cccCHHHH-----------Hh---hcCCcc-cccCCCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHH
Q 013235 335 VVTTPEIA-----------EV---LTRRNY-FNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKD 396 (447)
Q Consensus 335 v~~~~~i~-----------~~---l~~~~~-~~T~~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~ 396 (447)
+++++++. +. +....+ ..+-+-++...++..++|+.+.++ .+.+++.++.++|++.|.+.
T Consensus 256 I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-- 333 (475)
T PLN03226 256 IFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-- 333 (475)
T ss_pred EEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 66676543 22 221111 122223466666677789988654 36788999999999988774
Q ss_pred hcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 397 KYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 397 ~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
.+.++..-. ..-+..|++.... ....++.+.|.+.||++.++
T Consensus 334 G~~l~~~~t-~~hi~lv~~~~~g-------i~~~~~~~~L~~~~I~~nk~ 375 (475)
T PLN03226 334 GYKLVTGGT-DNHLVLWDLRPLG-------LTGSRVEKVLDLAHITLNKN 375 (475)
T ss_pred CCEEEcCCC-CCCEEEEEccCCC-------CCHHHHHHHHHHCCCEECCC
Confidence 343332100 1244455552211 11345667777889988754
No 285
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=2.6e-11 Score=122.89 Aligned_cols=234 Identities=18% Similarity=0.121 Sum_probs=146.0
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.. .+.+++++||++|+..++.... ..++.|++..++|.+......... .
T Consensus 48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all--~~Gd~Il~~~~~y~~~~~~~~~~~---------~ 114 (388)
T PRK08861 48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALL--GPDDLIVAPHDCYGGTYRLFNTRA---------N 114 (388)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHc--CCCCEEEEcCCchHHHHHHHHHHH---------h
Confidence 56778899999999999985 4789999999999999997542 356788888888854332111110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..++.....+. .| .+++++.+. + ++.+|++|...+++|.+.+ +++|.++|+++|+++|+||
T Consensus 115 ~~gi~v~~vd~-------~d----~e~l~~~i~---~-~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDe 175 (388)
T PRK08861 115 KGDFKVQFVDQ-------SD----AAALDAALA---K-KPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDN 175 (388)
T ss_pred cCCeEEEEECC-------CC----HHHHHHhcC---c-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEEC
Confidence 11333322211 12 456666654 2 5678888877788888876 8999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC--CccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
+|... . . ......-.|+++ +.|-++| +...|+++++ +++.+.+........-..+|..+...+..|+.
T Consensus 176 a~~~~-~-~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T 248 (388)
T PRK08861 176 TFLTP-V-L-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT 248 (388)
T ss_pred Ccccc-c-c-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC
Confidence 98621 0 1 111223468886 5599986 3567777764 55655443211112233457777766655544
Q ss_pred Hh--hhhHHHHHHHHHHHHHHHHHHHHHhcCCee------------------eEeecceeEEEEEe
Q 013235 371 IQ--KDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFV 416 (447)
Q Consensus 371 i~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~Gl~~giel~ 416 (447)
+. =+...+++.++.++|. .++.+. ...|.|-|+.|++.
T Consensus 249 l~lR~~~~~~~a~~~a~~L~--------~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 249 LGARMRVHEESAQQILAYLQ--------TQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHH--------hCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 32 1223344444444443 233221 23477889999985
No 286
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.42 E-value=1.9e-11 Score=124.85 Aligned_cols=236 Identities=16% Similarity=0.091 Sum_probs=151.0
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +..+.++||+.|+..+++.. ...+++||+..+.| |.+....... ..
T Consensus 60 ~r~~~p~~~~le~~lA~l~g~--~~~i~~~sG~~Al~~~l~~l--l~~Gd~Viv~~~~y-~~t~~~~~~~--------~~ 126 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEGG--EAAVALASGMGAITATLWTL--LRPGDEVIVDQTLY-GCTFAFLHHG--------LG 126 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHH--cCCCCEEEEccCcc-chHHHHHHHH--------Hh
Confidence 456788889999999998864 34577889999999998743 34567888877766 4433222110 01
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+.. ++.+|++|..+++.|.+.+ +++|.++|+++|+++|+|+
T Consensus 127 ~~G~~v~~vd~-------~d----~~~l~~~i~~----~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~ 187 (403)
T PRK07503 127 EFGVTVRHVDL-------TD----PAALKAAISD----KTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDN 187 (403)
T ss_pred hCCEEEEEeCC-------CC----HHHHHHhcCc----cCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEEC
Confidence 12333322211 12 4567766642 5678888888888888876 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-C-ccccccccCHHHHHhhcCC--cccccCCCChHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~~~~~i~~~l~~~--~~~~T~~~np~a~aaala~L~ 369 (447)
+|... ..+ .. .+...|+++ ++|.+++ | ...|+++.++++++.+... ........+|+.++.++..|+
T Consensus 188 a~a~~-~~~-~~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~ 260 (403)
T PRK07503 188 TYCTP-YLQ-RP-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK 260 (403)
T ss_pred CCccc-ccC-Cc-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc
Confidence 99632 222 11 223457775 6799996 5 6789899889888776521 112235567888888888877
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCee------------------eEeecceeEEEEEe
Q 013235 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFV 416 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~Gl~~giel~ 416 (447)
.+.. ..++..++...+.+.|++ ++.+. ..+|.|-|+.+++.
T Consensus 261 tl~~--r~~~~~~na~~~a~~L~~----~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~ 319 (403)
T PRK07503 261 TLAL--RMDRHCASAQAVAEWLAR----HPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELK 319 (403)
T ss_pred hHHH--HHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEC
Confidence 6532 222223444444444443 22221 12356888888884
No 287
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.41 E-value=2.1e-11 Score=117.98 Aligned_cols=299 Identities=18% Similarity=0.136 Sum_probs=167.4
Q ss_pred EEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh
Q 013235 102 LDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY 181 (447)
Q Consensus 102 lD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~ 181 (447)
+||-|..+. | .+|++.+|+.+.-. . .....+.++...++.+++++.+.. ..++|+.|||.||..||....
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~-~-~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~-- 71 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANA-V-GDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHC-- 71 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhccc-c-CCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhc--
Confidence 577666554 3 78999999987543 1 222334577888999999999854 789999999999999998443
Q ss_pred cCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc---CCCCeEEE
Q 013235 182 TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG---TSGHVAGF 258 (447)
Q Consensus 182 t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~---~~~~~aav 258 (447)
.+...+.....-|-.+..+-+... ..++...+......+. .+ +++++..+... .. ....+
T Consensus 72 -~~~~~vi~~~~aHi~~~E~Ga~~~---------~~~~~~~~~~~g~~Gk--lt----~e~v~~~i~~~d~~~~-~~~~~ 134 (342)
T COG2008 72 -QPGESVICHETAHIYTDECGAPEF---------FGGGQKLPIVPGADGK--LT----PEDVEAAIRPDDIHHA-PTPLA 134 (342)
T ss_pred -CCCCeEEEeccccceecccCcHHH---------HcCCceeccCCCCCCC--cC----HHHHHHhhcCCCcccC-CCceE
Confidence 445555555555644432211000 0122222211111111 12 56777665531 12 34455
Q ss_pred EEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcc--ccCCCcccccccCCCCCEEEeeccccCCccccccc
Q 013235 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA--RTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 336 (447)
Q Consensus 259 i~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfg--r~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~ 336 (447)
+.|.-..++|.+. |.++|++|.++|++||+.|-+|-+--.-. -.|. ....+.---|+++++=.-++|.|.++|+
T Consensus 135 ~~e~~~te~GtVy-~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~---~~~~~~~~~D~v~~~~tK~g~~~~gAiv 210 (342)
T COG2008 135 VLENTATEGGTVY-PLDELEAISAVCKEHGLPLHMDGARLANALVALGV---ALKTIKSYVDSVSFCLTKGGGAPVGAIV 210 (342)
T ss_pred EEeeccCCCceec-CHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCC---CHHHHHhhCCEEEEecccCCcceeeeEE
Confidence 5555555878765 89999999999999999999996531100 0110 1112223458887665555678888876
Q ss_pred -cCHHHHHhhcC--CcccccCCCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeeccee
Q 013235 337 -TTPEIAEVLTR--RNYFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410 (447)
Q Consensus 337 -~~~~i~~~l~~--~~~~~T~~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~ 410 (447)
+++++++.+.. +..+.-+.-.-+-.++++..|+ ++ ....|..++.++|.++|.+. .+.-...+..-+|
T Consensus 211 ~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~---~~~~~~~~~Han~mA~~La~~~~~~---~G~~~~~~~~tN~ 284 (342)
T COG2008 211 FGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALE---DDVWRLAADHANAMAARLAEGLEAK---PGVKLAFPVETNM 284 (342)
T ss_pred EcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhhhc---CCceeccCCcccE
Confidence 68888776643 2233333333344455555553 22 12344555577777776643 1211122244566
Q ss_pred EEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 411 LGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 411 ~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+-+.+.+. .....+....+..+|+++.
T Consensus 285 vf~~l~~~-------~i~~l~~~~~~~~~~~~~~ 311 (342)
T COG2008 285 VFVRLPES-------AIEALRLAGALFYRGVLIG 311 (342)
T ss_pred EEEECChH-------HHHHHHhhchhheeeeecc
Confidence 66665221 0122334445566666554
No 288
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.41 E-value=1e-10 Score=116.18 Aligned_cols=244 Identities=20% Similarity=0.236 Sum_probs=157.2
Q ss_pred CCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCC-CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~-~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~y 194 (447)
.+|+|.+|+.++.- .|.+..| .....+..++|...+... .+.+++..||+-|+|+|+.-.- .+.++|+++.++.
T Consensus 16 v~~~V~~am~~~~~--~h~s~~F-~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--~pgdkVLv~~nG~ 90 (383)
T COG0075 16 VPPRVLLAMARPMV--GHRSPDF-VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--EPGDKVLVVVNGK 90 (383)
T ss_pred CCHHHHHHhcCCCC--CCCCHHH-HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--CCCCeEEEEeCCh
Confidence 35888888765432 2433322 456677888888888654 3678888999999999996332 3678999998888
Q ss_pred ccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC-CCCeEEEEEccccCCCceeeCC
Q 013235 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT-SGHVAGFLSESIQGVGGIIELA 273 (447)
Q Consensus 195 HG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~-~~~~aavi~Epi~~~gG~~~~~ 273 (447)
.|....=+.-... ..++.+.. .|+...+ .+++++.+++.. .+-++.+.+| .++|+..|
T Consensus 91 FG~R~~~ia~~~g---------~~v~~~~~------~wg~~v~--p~~v~~~L~~~~~~~~V~~vH~E---TSTGvlnp- 149 (383)
T COG0075 91 FGERFAEIAERYG---------AEVVVLEV------EWGEAVD--PEEVEEALDKDPDIKAVAVVHNE---TSTGVLNP- 149 (383)
T ss_pred HHHHHHHHHHHhC---------CceEEEeC------CCCCCCC--HHHHHHHHhcCCCccEEEEEecc---CcccccCc-
Confidence 8876544332110 12222221 2222111 677888887432 1234455555 45677877
Q ss_pred CChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhcCCcc-
Q 013235 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNY- 350 (447)
Q Consensus 274 ~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~~~- 350 (447)
+++|.++|++||+++|+|-|-+ || | ..+-.+.||+ |+++.| |+|++---+|.+..+++..+.+....+
T Consensus 150 ---l~~I~~~~k~~g~l~iVDaVsS-~G--g-~~~~vd~wgi--Dv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~ 220 (383)
T COG0075 150 ---LKEIAKAAKEHGALLIVDAVSS-LG--G-EPLKVDEWGI--DVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP 220 (383)
T ss_pred ---HHHHHHHHHHcCCEEEEEeccc-CC--C-cccchhhcCc--cEEEecCchhccCCCccceeEECHHHHHHHhcCCCC
Confidence 9999999999999999999875 54 3 3344566777 888766 999853235788889888887764311
Q ss_pred ----------------cccCCCChHHHHHH-HHHHHHHhhhh---HHHHHHHHHHHHHHHHHHH
Q 013235 351 ----------------FNTFGGNPVCTAAG-HAVLKVIQKDK---LQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 351 ----------------~~T~~~np~a~aaa-la~L~~i~~~~---l~~~~~~~g~~l~~~L~~l 394 (447)
..+....|+....| .++|+.|.+++ ..++-+.+++.++++++++
T Consensus 221 ~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al 284 (383)
T COG0075 221 SFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL 284 (383)
T ss_pred ceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 12223345555444 47899998775 3455666677777777766
No 289
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.40 E-value=9.3e-11 Score=120.87 Aligned_cols=276 Identities=17% Similarity=0.145 Sum_probs=161.4
Q ss_pred HHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH-------hhcCCCeEEEEcC
Q 013235 120 VVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR-------LYTGCNDIISLRN 192 (447)
Q Consensus 120 v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar-------~~t~~~~ii~~~~ 192 (447)
-.+++.+.+.....+ ..+...+|+++|++++. .+.+++++||++|+..|++.+. ....++.||+...
T Consensus 46 ~~~a~~~~~~~~~~~----~G~~~~~fe~~lA~~~g--~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~ 119 (438)
T PRK15407 46 ELQNLVDASLDFWLT----TGRFNDAFEKKLAEFLG--VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAA 119 (438)
T ss_pred HHHHHHHHHHhCccc----CChhHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCC
Confidence 344555555543221 23456789999999985 4578999999999999998653 2345688999999
Q ss_pred CcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeC
Q 013235 193 AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (447)
Q Consensus 193 ~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~ 272 (447)
+|.+........ |...+..+.. ...|+.| .+++++.+. + ++.+|++.+..|. .
T Consensus 120 t~~a~~~~v~~~-------------G~~pv~vdvd-~~~~~id----~~~le~~i~---~-~tkaVi~~~~~G~---p-- 172 (438)
T PRK15407 120 GFPTTVNPIIQN-------------GLVPVFVDVE-LPTYNID----ASLLEAAVS---P-KTKAIMIAHTLGN---P-- 172 (438)
T ss_pred CcHHHHHHHHHc-------------CCEEEEEecC-CCcCCcC----HHHHHHHcC---c-CCeEEEEeCCCCC---h--
Confidence 986554433222 2222211110 0123334 566776663 2 5678888775442 2
Q ss_pred CCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee----ccccCCccccccccCH-HHHHhhcC
Q 013235 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTTP-EIAEVLTR 347 (447)
Q Consensus 273 ~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pigav~~~~-~i~~~l~~ 347 (447)
..+++|.++|++||++||.|++|+ +|- .+.-...|-.-|+.+|| |.+..|= -|+++++. ++.+.+..
T Consensus 173 --~dl~~I~~la~~~gi~vIeDaa~a-~G~----~~~g~~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~ 244 (438)
T PRK15407 173 --FDLAAVKAFCDKHNLWLIEDNCDA-LGS----TYDGRMTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIES 244 (438)
T ss_pred --hhHHHHHHHHHHCCCEEEEECccc-hhh----hcCCeeeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHH
Confidence 348999999999999999999996 432 11112233344888876 6665331 26777754 44332211
Q ss_pred ----Cc-----------------------------------ccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 013235 348 ----RN-----------------------------------YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLK 388 (447)
Q Consensus 348 ----~~-----------------------------------~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~ 388 (447)
+. .+..+.-+.+.+|.++..|+.+++ ..++-+++.+++.
T Consensus 245 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~--~~~~R~~~a~~y~ 322 (438)
T PRK15407 245 FRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPG--FIEARKANFAYLK 322 (438)
T ss_pred HHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 00 011223468889999999987743 6666677777888
Q ss_pred HHHHHHHH--hcCCe-eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 389 ERLTALKD--KYGII-GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 389 ~~L~~l~~--~~~~i-~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+.|..+.. ..+.. .+....-.++.+.+.+.. .....++.+.|.++||-.+
T Consensus 323 ~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~Rd~l~~~L~~~GI~~~ 375 (438)
T PRK15407 323 EGLASLEDFLILPEATPNSDPSWFGFPITVKEDA------GFTRVELVKYLEENKIGTR 375 (438)
T ss_pred HHhccCCCccccCcCCCCCeeEEEEEEEEECCcC------CCCHHHHHHHHHHCCCCcc
Confidence 87765421 11110 011111123333332110 0124679999999999665
No 290
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=2e-11 Score=112.31 Aligned_cols=270 Identities=16% Similarity=0.186 Sum_probs=162.1
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCC
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~ 217 (447)
|+.+.-.++...++.--|-..+.++...+..|.+++.||... .+|+.+|+..-++|.-++..+. ....
T Consensus 66 ~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v~A~-----------iNd~ 133 (375)
T KOG0633|consen 66 YPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVVDAA-----------INDA 133 (375)
T ss_pred cCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEEEee-----------cCCc
Confidence 444444566666666556556889999999999999998554 5788999999999943332211 0112
Q ss_pred CeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc
Q 013235 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (447)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 297 (447)
++..++.. . .|+-+ .+.+.++++.. ..+.++++..-.+++|.+. ..+-+++|.+.-+ ++++++||+|
T Consensus 134 eVvkvpl~--p--dF~ln----vdai~evl~~d--s~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAY 200 (375)
T KOG0633|consen 134 EVVKVPLN--P--DFSLN----VDAIAEVLELD--SKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAY 200 (375)
T ss_pred eEEEecCC--C--Ccccc----HHHHHHHHhcc--ccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeee
Confidence 34444321 1 34344 44555555432 1455555544444445444 3344555554433 7899999999
Q ss_pred cCccccCCCcccccccCCCCCEE---Eeecccc-CCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh
Q 013235 298 AGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (447)
Q Consensus 298 tGfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~ 373 (447)
..|.-.++. ..+..-.|+++ ||||.+| .|+++|+..++.++++.+.... .+|+-+..+..+|+++|.-- .
T Consensus 201 idFsg~~S~---~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K--aPYNiS~~~s~~AL~Als~~-n 274 (375)
T KOG0633|consen 201 IDFSGVESR---MKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK--APYNISVAGSVAALAALSDS-N 274 (375)
T ss_pred Eeecccccc---chHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc--CCccccchhHHHHHHhcCcc-c
Confidence 998433432 23344468877 6999999 7999999999999999887533 45566666677777776411 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeec--ceeEEEEEeeCCCCCCCCHHHHHHH-HHHHHhCCceee
Q 013235 374 DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR--GFLLGVEFVTDRQLKTPAKAETLYI-MDKMKGICALFF 444 (447)
Q Consensus 374 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~--Gl~~giel~~~~~~~~p~~~~~~~~-~~~l~~~Gvlv~ 444 (447)
-+.++.+++.-.+-+.+|-......+.+.++.|. ..|+.+++.... ...+.++ .+.+-+.||.|+
T Consensus 275 ~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~------n~~akkly~q~at~~gVvVR 342 (375)
T KOG0633|consen 275 GKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD------NGMAKKLYKQDATKMGVVVR 342 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC------cHHHHHHHHHHHHhcceEEE
Confidence 1223334444334444444444444555554442 578888886431 1234444 445567899986
No 291
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.38 E-value=2.4e-11 Score=124.66 Aligned_cols=163 Identities=23% Similarity=0.268 Sum_probs=112.2
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +..++++||++|+..+++.... .+++|++....|+|... .+... .+
T Consensus 53 ~r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~--~Gd~Vl~~~~~Y~~t~~-~~~~~--------l~ 119 (425)
T PRK06084 53 TRIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAE--AGDNIVSVAKLYGGTYN-LLAHT--------LP 119 (425)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHH-HHHHh--------cc
Confidence 345677788999999998753 4567899999999999985532 45789999999986432 22210 01
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..++.....+. .| .+++++.+.. ++.+|++|.++++.|.+.+ +++|.++|+++|+++|+||
T Consensus 120 ~~gi~v~~~d~-------~d----~e~le~ai~~----~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~ 180 (425)
T PRK06084 120 RIGIETRFAAH-------DD----IAALEALIDE----RTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDN 180 (425)
T ss_pred cceeEEEEECC-------CC----HHHHHHHhcc----CCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 11222211110 13 5667777652 5678999999899998886 8999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-Ccccccccc
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPLGAVVT 337 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pigav~~ 337 (447)
++. .+... .......|+++ ++|.++| |-++|.++.
T Consensus 181 a~a-~~~~~------~p~~~gaDivv~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 181 TVA-TPVLC------RPFEHGADIVVHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred CCc-ccccC------ChhhcCCCEEEECchhcccccccceeEEEE
Confidence 996 22211 22233468874 7799986 667776655
No 292
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.38 E-value=2.3e-11 Score=119.14 Aligned_cols=227 Identities=13% Similarity=0.120 Sum_probs=129.7
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCC
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~ 217 (447)
.+...+.++.+++++.+..+ +.++++|++++++..++.... .++++|++.+++|... ..++...+..
T Consensus 56 ~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~--~~gd~Vlv~~~~h~s~-~~~~~~~g~~--------- 122 (294)
T cd00615 56 DPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVC--GPGDKILIDRNCHKSV-INGLVLSGAV--------- 122 (294)
T ss_pred CCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcC--CCCCEEEEeCCchHHH-HHHHHHCCCE---------
Confidence 35667788888898888542 344458999999999887543 3567788777765433 3333332211
Q ss_pred CeEeecCC-CCc-CCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 218 GVHHALNP-DPY-RGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 218 g~~~~~~p-~~~-~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
...++.. +.. ....+.| .+++++.+.+. ++..+.++..|. ..|.+.+ +++|.++|+++|+++|+||
T Consensus 123 -~~~v~~~~~~~~~~~~~i~----~~~l~~~l~~~-~~~k~v~l~~p~--~~G~~~d----l~~I~~~~~~~g~~livDe 190 (294)
T cd00615 123 -PVYLKPERNPYYGIAGGIP----PETFKKALIEH-PDAKAAVITNPT--YYGICYN----LRKIVEEAHHRGLPVLVDE 190 (294)
T ss_pred -EEEecCccCcccCcCCCCC----HHHHHHHHHhC-CCceEEEEECCC--CCCEecC----HHHHHHHHHhcCCeEEEEC
Confidence 1111110 100 0011234 56777777542 223345555563 4687776 9999999999999999999
Q ss_pred cccCc-cccCCCcccccccCCCCCEEE--eeccccCCccccccc-cCHHHH--HhhcCC-cccccCCCChHHHHHHHHHH
Q 013235 296 VQAGF-ARTGSHFWGFEAHGVVPDIVT--MAKGIGNGIPLGAVV-TTPEIA--EVLTRR-NYFNTFGGNPVCTAAGHAVL 368 (447)
Q Consensus 296 v~tGf-gr~G~~~~~~~~~gv~pDivt--~sK~lg~G~pigav~-~~~~i~--~~l~~~-~~~~T~~~np~a~aaala~L 368 (447)
++..+ ...+ .+. ........|+++ +.|.++ |++.|+++ .+.+.. +.+... ..+.|.+.+...+++..+++
T Consensus 191 A~~~~~~~~~-~~~-~~~~~~~~div~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~ 267 (294)
T cd00615 191 AHGAHFRFHP-ILP-SSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVAR 267 (294)
T ss_pred cchhhhccCc-ccC-cchhhcCCcEEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHH
Confidence 98643 2222 111 111122458875 569874 45554443 433311 112111 12234455566666666777
Q ss_pred HHHhh--hhHHHHHHHHHHHHHHHHH
Q 013235 369 KVIQK--DKLQNNAHVVGSYLKERLT 392 (447)
Q Consensus 369 ~~i~~--~~l~~~~~~~g~~l~~~L~ 392 (447)
+.+.+ +++.+++.++.++++++|.
T Consensus 268 ~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 268 AMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 76643 3566777777777777664
No 293
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.37 E-value=1.1e-10 Score=118.35 Aligned_cols=195 Identities=13% Similarity=0.105 Sum_probs=125.5
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCC
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~ 217 (447)
..++...+|+++|+++.++ +.+++++||++|+..++... ...+++||+.++.|.+........ ....
T Consensus 58 ~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~al--l~~GD~Vvv~~~~Y~~t~~l~~~~---------l~~~ 124 (394)
T PRK09028 58 RGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSF--LKAGDHLLMVDSCYEPTRDLCDKI---------LKGF 124 (394)
T ss_pred CCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHh---------hhhc
Confidence 3466778999999988743 45789999999999988643 335688999999885544321110 0012
Q ss_pred CeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc
Q 013235 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (447)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 297 (447)
|+.....+. .+ .+.+++.+. .++.+|++|.+.++.|.+.+ +++|.++|+++|+++|+||+|
T Consensus 125 Gi~v~~v~~-------~~----~e~l~~~l~----~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~ 185 (394)
T PRK09028 125 GIETTYYDP-------MI----GEGIRELIR----PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTW 185 (394)
T ss_pred ceEEEEECC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCc
Confidence 333221110 12 345666653 25779999988888887766 999999999999999999999
Q ss_pred cCccccCCCcccccccCCCCCEEE--eeccccC-C-ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 298 AGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 298 tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
.. + . .+.-...-.|+++ ..|-++| | .-.|+++.++++.+.+.......--..+|..+...+..|+.+
T Consensus 186 a~----p--~-~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL 256 (394)
T PRK09028 186 AS----P--I-NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTL 256 (394)
T ss_pred cc----c--c-cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH
Confidence 62 2 1 1222233458886 5699976 3 667877778877665542111111124577777666555443
No 294
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.36 E-value=4.8e-10 Score=113.78 Aligned_cols=282 Identities=16% Similarity=0.116 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 118 p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
++-.+++.+.++.... +..+...++++++++++.. +..++++||++|+..+++... ..+++.||+...+|++.
T Consensus 10 ~~~~~~v~~~~~~~~~----~~g~~~~~le~~la~~~g~--~~~v~~~sgt~al~~~l~al~-~~~Gd~Viv~~~~~~~~ 82 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL----TQGPTVPAFEEALAEYVGA--KYAVAFNSATSALHIACLALG-VGPGDRVWTTPITFVAT 82 (380)
T ss_pred HHHHHHHHHHHhcCCc----cCChhHHHHHHHHHHHHCC--CeEEEEcCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHH
Confidence 4557777777765422 2355678899999999854 456677899999999998542 23567899988888655
Q ss_pred chhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChH
Q 013235 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (447)
Q Consensus 198 ~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l 277 (447)
....... |...+..+... ..+..| .+++++.+......++.+|++- + ..|...+ +
T Consensus 83 ~~~~~~~-------------G~~~~~~~~~~-~~~~~d----~~~l~~~i~~~~~~~t~~v~~~--~-~~G~~~~----~ 137 (380)
T TIGR03588 83 ANCALYC-------------GAKVDFVDIDP-DTGNID----EDALEKKLAAAKGKLPKAIVPV--D-FAGKSVD----M 137 (380)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCcC----HHHHHHHhhcccCCCceEEEEe--C-CCCccCC----H
Confidence 3222211 22222221100 112234 5677777753211245555532 2 2455544 8
Q ss_pred HHHHHHHHHhCCEEEEeccccCccccCCCcccccccCC--CCCEEEee----ccccCCcccccccc-CHHHHHhhcCC--
Q 013235 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV--VPDIVTMA----KGIGNGIPLGAVVT-TPEIAEVLTRR-- 348 (447)
Q Consensus 278 ~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv--~pDivt~s----K~lg~G~pigav~~-~~~i~~~l~~~-- 348 (447)
++|.++|++||+++|.|++|+ +|- . +.....|. .-|++++| |.++.| .-|++++ ++++.+.+...
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a-~g~---~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~ 211 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHA-LGA---E-YGGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRS 211 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCc-ccC---c-cCCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHH
Confidence 999999999999999999997 331 1 11122333 44999877 878644 3355554 46666544310
Q ss_pred -c-c---------------------cccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe
Q 013235 349 -N-Y---------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (447)
Q Consensus 349 -~-~---------------------~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr 405 (447)
. . +..+.-+.+..+.+++.|+.+ ++..++-+++.+++.+.|.++. .........
T Consensus 212 ~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~-~~~~~~~~~ 288 (380)
T TIGR03588 212 HGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLP-YFTPLTIPL 288 (380)
T ss_pred CCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCC
Confidence 0 0 001222567777777778765 4466777888888888887752 111111101
Q ss_pred ec---ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 406 GR---GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 406 g~---Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
+. -.+..+.+... .. ....++.+.|.++||.++..
T Consensus 289 ~~~~~~~~~~i~~~~~-~~-----~~r~~l~~~L~~~gI~~~~~ 326 (380)
T TIGR03588 289 GSKSAWHLYPILLDQE-FG-----CTRKEVFEALRAAGIGVQVH 326 (380)
T ss_pred CCEeEEEEEEEEECCc-CC-----CCHHHHHHHHHHCCCCcccC
Confidence 11 12223333211 00 12467888999999987643
No 295
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.35 E-value=4e-11 Score=123.27 Aligned_cols=162 Identities=22% Similarity=0.228 Sum_probs=111.4
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
+..++...+|+++|+++.+. +..++++||++|+.++++... ..++.||+....|+|........ ...
T Consensus 59 r~~~p~~~~le~~lA~l~g~--~~al~~~SG~~Ai~~al~all--~pGd~VIv~~~~y~~t~~~~~~~---------~~~ 125 (427)
T PRK05994 59 RITNPTNAVLEERVAALEGG--TAALAVASGHAAQFLVFHTLL--QPGDEFIAARKLYGGSINQFGHA---------FKS 125 (427)
T ss_pred CCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHh--CCCCEEEEecCcchhHHHHHHHH---------HHh
Confidence 34567778899999999854 457889999999999998653 35688999999997653221100 001
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|+.....+. .| .+++++.+. + ++.+|++|.+.+++|.+.+ +++|.++|+++|+++|+||+
T Consensus 126 ~G~~v~~vd~-------~d----~~~l~~ai~---~-~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a 186 (427)
T PRK05994 126 FGWQVRWADA-------DD----PASFERAIT---P-RTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNT 186 (427)
T ss_pred cCcEEEEECC-------CC----HHHHHHhcC---c-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECC
Confidence 1333222211 12 456776664 2 5788999999899998887 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCCEEE--eeccccC-Ccccccccc
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPLGAVVT 337 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pigav~~ 337 (447)
++. + . ........+|+++ ++|.+++ |-++|.++.
T Consensus 187 ~a~----~-~--~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 187 LAS----P-Y--LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred ccc----c-c--cCCccccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 862 2 1 1233445679886 6799985 445565443
No 296
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.34 E-value=3.9e-10 Score=117.02 Aligned_cols=307 Identities=12% Similarity=0.009 Sum_probs=164.6
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHh-c--cccccccc--c---hHHHH-HHHHHHHhCCCCCceEEEc---CC
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR-I--QHSTVLYL--N---HAIAD-FAEALASKMPGNLKVVFFT---NS 166 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~-~--~~~~~~~~--~---~~~~e-lae~L~~~~~~~~~~v~~~---~s 166 (447)
+..|.+.++-+ ...|.|.+++...+.. + +..+..+. . ..+.+ ..+++++.+....+.+.|+ +|
T Consensus 34 ~~~l~l~~sen-----~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 34 IEGLELIASEN-----FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYS 108 (452)
T ss_pred HcCeeEecccc-----cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCc
Confidence 34666665444 3468899988877743 3 22222221 1 22222 3457777787655555566 79
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHH
Q 013235 167 GTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (447)
Q Consensus 167 GseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (447)
|++||..+++... ..++.|++. ..-||......... ...+.......+...+++.... ...| .++|+++
T Consensus 109 gt~an~~v~~al~--~~gd~Ii~~-~~ehg~~l~~~~~l--~~~~~~~~~~~~~~~~~~~~~~--g~id----~~~L~~~ 177 (452)
T PTZ00094 109 GSPANFAVYTALL--QPHDRIMGL-DLPSGGHLTHGFYT--AKKKVSATSIYFESLPYQVNEK--GLID----YDKLEEL 177 (452)
T ss_pred hHHHHHHHHHHhc--CCCCEEEec-ccccCCcccccccc--cccccccceeeeeeeecccCCC--CCcC----HHHHHHH
Confidence 9999999887552 245666654 44465544321100 0000000001122222211101 1124 5778887
Q ss_pred HHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--c
Q 013235 247 IDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--K 324 (447)
Q Consensus 247 i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K 324 (447)
+....+ ..+++. .+..|...+ +++|.++|+++|+++++|++|+ +|..+...+..... ..|+++++ |
T Consensus 178 l~~~~~---~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~~--~~D~l~~S~hK 245 (452)
T PTZ00094 178 AKAFRP---KLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPFP--YADVVTTTTHK 245 (452)
T ss_pred HHHhCC---CEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCCC--CCcEEEcCCcc
Confidence 754322 234441 234566666 9999999999999999999995 66554222211111 46998766 9
Q ss_pred cccCCccccccccCHHHHHhhcCC---cccccC--CCChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHH
Q 013235 325 GIGNGIPLGAVVTTPEIAEVLTRR---NYFNTF--GGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKD 396 (447)
Q Consensus 325 ~lg~G~pigav~~~~~i~~~l~~~---~~~~T~--~~np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~ 396 (447)
.+.|.. -|++.+++++.+.+... ..+.+| +.++...++..++|+.+.+. ++.+++.++.++|.+.|.+.
T Consensus 246 ~l~GP~-Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-- 322 (452)
T PTZ00094 246 SLRGPR-SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-- 322 (452)
T ss_pred CCCCCC-ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC--
Confidence 886522 24555666554332221 111223 34567777777889988543 46788888889998888663
Q ss_pred hcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 397 KYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 397 ~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
.+.+...- ...-...+.+.... .....+...|.++||++.
T Consensus 323 g~~v~~~~-~~~~~~~v~~~~~~-------~~~~~~~~~L~~~gI~vs 362 (452)
T PTZ00094 323 GYDLVTGG-TDNHLVLVDLRPFG-------ITGSKMEKLLDAVNISVN 362 (452)
T ss_pred CcEEecCC-CCCceEeecCCcCC-------CCHHHHHHHHHHCCcEEe
Confidence 22222110 00112233332111 012456666767799985
No 297
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.33 E-value=2.5e-10 Score=115.71 Aligned_cols=171 Identities=18% Similarity=0.139 Sum_probs=111.9
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +..++++||+.|+.+++.+ ...+++||+.++.|++......... .
T Consensus 45 ~r~~~p~~~~Le~~la~l~g~--~~al~~~SG~~Al~~~l~~---l~pGd~Vi~~~~~y~~t~~~~~~~~---------~ 110 (380)
T PRK06176 45 SRSGNPTRFALEELIADLEGG--VKGFAFASGLAGIHAVFSL---FQSGDHVLLGDDVYGGTFRLFDKVL---------V 110 (380)
T ss_pred cCCCChhHHHHHHHHHHHhCC--CCEEEECCHHHHHHHHHHH---cCCCCEEEEcCCChhHHHHHHHHHH---------H
Confidence 456778888999999998753 4467889999999876643 2456889998888865542211110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. + ++.+|++|...+..|.+.+ +++|.++|+++|+++|+|+
T Consensus 111 ~~gi~v~~vd~-------~d----~e~l~~ai~---~-~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~ 171 (380)
T PRK06176 111 KNGLSCTIIDT-------SD----LSQIKKAIK---P-NTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDN 171 (380)
T ss_pred hcCeEEEEcCC-------CC----HHHHHHhcC---c-CceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEC
Confidence 11333222211 12 456666653 2 5778888887888888776 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEEee--ccccC-C-ccccccccC-HHHHHhhc
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN-G-IPLGAVVTT-PEIAEVLT 346 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~-G-~pigav~~~-~~i~~~l~ 346 (447)
+++.. ..+ ...+...|++++| |.+++ | .-.|+++++ +++.+.+.
T Consensus 172 t~a~~-~~~------~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 172 TFATP-YYQ------NPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred Ccccc-ccC------CccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 98632 111 1123345888754 99975 3 335556664 56655543
No 298
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.32 E-value=1.1e-09 Score=113.58 Aligned_cols=170 Identities=17% Similarity=0.163 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEe
Q 013235 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHH 221 (447)
Q Consensus 142 ~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~ 221 (447)
...++.+.++++++.+.+++.++++|++++++++.. +...++++|++.++.| .....++..... ..|...
T Consensus 113 ~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a-~~~~~g~~Vlv~~~~~-~~~~~~~~~~~~--------~~G~~~ 182 (447)
T PRK00451 113 AIFEYQTMICELTGMDVANASMYDGATALAEAALMA-VRITKRKKVLVSGAVH-PEYREVLKTYLK--------GQGIEV 182 (447)
T ss_pred HHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH-HHhcCCCEEEEeCccC-HHHHHHHHHHHH--------hCCcEE
Confidence 344556777888876667888999999988877753 3334567788776644 444333321100 012222
Q ss_pred ecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE--eccccC
Q 013235 222 ALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA--DEVQAG 299 (447)
Q Consensus 222 ~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~--DEv~tG 299 (447)
+..|.... ..| .+++++.+. + +++++++... +.+|.+.+ +++|.++|+++|+++|+ |.+..|
T Consensus 183 ~~v~~~~~---~~d----~~~l~~~i~---~-~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g 246 (447)
T PRK00451 183 VEVPYEDG---VTD----LEALEAAVD---D-DTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLG 246 (447)
T ss_pred EEecCCCC---CCC----HHHHHHhcC---C-CeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhc
Confidence 22221110 123 566777664 2 5667666654 56788865 99999999999999998 655322
Q ss_pred ccccCCCcccccccCCCCCEEEe-----ecccc-CCccccccccCHHHHHhh
Q 013235 300 FARTGSHFWGFEAHGVVPDIVTM-----AKGIG-NGIPLGAVVTTPEIAEVL 345 (447)
Q Consensus 300 fgr~G~~~~~~~~~gv~pDivt~-----sK~lg-~G~pigav~~~~~i~~~l 345 (447)
+ .. ... ....|+++. ||.+. +|..+|++++++++++.+
T Consensus 247 ~--~~----~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~ 290 (447)
T PRK00451 247 L--LK----PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQM 290 (447)
T ss_pred c--CC----Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhC
Confidence 1 11 111 234588864 55554 567789999999988874
No 299
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.31 E-value=7e-11 Score=110.66 Aligned_cols=295 Identities=19% Similarity=0.170 Sum_probs=175.6
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar 179 (447)
+.+|+-|-..+. .-.+.++|+.++.-.-. -...++...+|+++.++++ +.+.-+|++||+..|..||+.-.
T Consensus 22 ~~vDLRSDTvT~----PTdeMr~am~eA~vgDd---VyGeD~tt~rLE~~vA~l~--GKEAgLFv~SGTmgNllaIm~Hc 92 (384)
T KOG1368|consen 22 RSVDLRSDTVTV----PTDEMRRAMAEASVGDD---VYGEDPTTNRLEQRVAELF--GKEAGLFVPSGTMGNLLAIMVHC 92 (384)
T ss_pred eccccccccccC----ChHHHHHHHhhcccCcc---cccCCccHHHHHHHHHHHh--CccceeeecccccccHHHHHHHh
Confidence 456776665544 34567777766532210 1234677789999999998 45678999999999999998654
Q ss_pred hhcCCCeEEEEc-CCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC----CCC
Q 013235 180 LYTGCNDIISLR-NAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT----SGH 254 (447)
Q Consensus 180 ~~t~~~~ii~~~-~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~----~~~ 254 (447)
... ...||+-+ .--|-+..+.++.- .|++..+.-+. +|.---++++|+.+.... -.-
T Consensus 93 ~~r-g~eii~gd~~HI~~~E~gg~s~l-----------~gv~~~tv~~e------~dgtm~ledIe~~ir~~~GD~H~p~ 154 (384)
T KOG1368|consen 93 HQR-GSEIIVGDRAHIHRYEQGGISQL-----------AGVHVRTVKNE------NDGTMDLEDIEAAIRVPKGDCHMPP 154 (384)
T ss_pred cCC-CceEEeccchheeehhccChhhh-----------ccceeEeeeeC------CCCeeeHHHHHHhhcCCCCCccCCC
Confidence 433 34444322 22222222222211 23333322111 111111678888776321 114
Q ss_pred eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCC-------CCCE--EEeec
Q 013235 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGV-------VPDI--VTMAK 324 (447)
Q Consensus 255 ~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv-------~pDi--vt~sK 324 (447)
...|.+|--+...|-.+.|-+|+.++.++|++||+.|-+|-+. .|.. -..|+ .-|- +||||
T Consensus 155 T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGAR---------i~NAavasgV~vk~i~~~fDSVsiCLSK 225 (384)
T KOG1368|consen 155 TKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGAR---------IFNAAVASGVPVKKICSAFDSVSICLSK 225 (384)
T ss_pred ceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhh---------hhhHHHHcCCCHHHHHHhhhhhhhhhhc
Confidence 6788888755554444558999999999999999999999643 2211 11222 2343 48999
Q ss_pred cccCCccccc-cccCHHHHHhhcC--CcccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-C
Q 013235 325 GIGNGIPLGA-VVTTPEIAEVLTR--RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-I 400 (447)
Q Consensus 325 ~lg~G~piga-v~~~~~i~~~l~~--~~~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~ 400 (447)
+||. |+|- +++++++++.... ...++-+--.-+-+|||+-+|+. .-.++.+.++..+.|-+.+... + +
T Consensus 226 glgA--PVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~----~~i 297 (384)
T KOG1368|consen 226 GLGA--PVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTP----EEI 297 (384)
T ss_pred cCCC--CcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhccc----cce
Confidence 9964 6655 5688888765432 12233333356778888888863 2224555556665555555432 2 3
Q ss_pred eeeEe-ecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 401 IGDVR-GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 401 i~~vr-g~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
-..|. -.-.|..+++..++- .+.++.+.+.+.||++-.
T Consensus 298 ~v~v~a~etNiv~~~l~q~~~-------~~~~l~~~~~k~gi~lm~ 336 (384)
T KOG1368|consen 298 RVEVPAVETNIVNMVLCQARL-------TAEELCKFLEKNGILLMG 336 (384)
T ss_pred eeecchhhcceeeeecccccC-------CHHHHHHHHHHCCeEEee
Confidence 34455 556788887754432 257789999999998754
No 300
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.31 E-value=2.1e-10 Score=117.92 Aligned_cols=163 Identities=20% Similarity=0.209 Sum_probs=110.7
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++....|+++|+++.+ .+..++++||++|+..++... ...++.|++..+.|++......... .
T Consensus 59 ~r~~~p~~~~Le~~lA~leg--~~~al~~~sG~~Ai~~al~~l--l~~GD~Vlv~~~~y~~t~~~~~~~~---------~ 125 (431)
T PRK08248 59 TRIMNPTTDVFEKRIAALEG--GIGALAVSSGQAAITYSILNI--ASAGDEIVSSSSLYGGTYNLFAHTL---------P 125 (431)
T ss_pred ECCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCchhhHHHHHHHHH---------H
Confidence 34567888899999999985 356789999999999998644 2356788888887765432221110 1
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. + ++.+|++|...++.|.+.+ +++|.++|+++|+++|+|+
T Consensus 126 ~~Gv~v~~vd~-------~d----~e~l~~ai~---~-~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~ 186 (431)
T PRK08248 126 KLGITVKFVDP-------SD----PENFEAAIT---D-KTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDN 186 (431)
T ss_pred hCCEEEEEECC-------CC----HHHHHHhcC---C-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeC
Confidence 12333333221 12 466776664 2 5678888877788888887 8999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-Ccccccccc
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPLGAVVT 337 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pigav~~ 337 (447)
++. ++ .. ......-.|+++ +.|.+++ |..+|+++.
T Consensus 187 t~a----~~-~~--~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 187 TFA----SP-YL--LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred CCC----cc-cc--CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 975 22 11 111123358876 5699986 677777665
No 301
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.30 E-value=3.3e-10 Score=114.71 Aligned_cols=238 Identities=19% Similarity=0.141 Sum_probs=139.1
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++... +..++++||+.|+..++.+ ...+++||+.++.|.+......... .
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g~--~~~~~~~sG~aai~~~~~~---l~~Gd~Viv~~~~y~~~~~~~~~~~---------~ 110 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEGG--HAGFAFGSGMAAITAVMML---FSSGDHVILTDDVYGGTYRVMTKVL---------N 110 (377)
T ss_pred CCCCChHHHHHHHHHHHHhCC--CceEEeCCHHHHHHHHHHH---hCCCCEEEECCCccchHHHHHHHHH---------h
Confidence 456788889999999998854 4456789999988876542 2356889999998864432221110 0
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. + ++.+|++|...++.|.+.+ +++|.++|+++|+++|+||
T Consensus 111 ~~G~~v~~v~~-------~d----~~~l~~ai~---~-~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~ 171 (377)
T PRK07671 111 RFGIEHTFVDT-------SN----LEEVEEAIR---P-NTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDN 171 (377)
T ss_pred cCCeEEEEECC-------CC----HHHHHHhcC---C-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEEC
Confidence 11333322221 13 456766664 2 5678888876677777765 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEE--eeccccC-C-cccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
++... ..+ .. .....|+++ ++|.++| + .-.|++++ ++++++.+........-..+|..+..++..++.
T Consensus 172 a~~~~-~~~-~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~t 244 (377)
T PRK07671 172 TFMTP-YWQ-SP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKT 244 (377)
T ss_pred CCCcc-ccC-Ch-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcCh
Confidence 98531 112 11 223348875 6799984 2 33444555 566766554322111122357666666655544
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHH----hcCCe----------eeEeecceeEEEEE
Q 013235 371 IQKDKLQNNAHVVGSYLKERLTALKD----KYGII----------GDVRGRGFLLGVEF 415 (447)
Q Consensus 371 i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i----------~~vrg~Gl~~giel 415 (447)
+.. .+++..++...+.+.|++... .|+.+ ....|.|-|+.|++
T Consensus 245 l~~--R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 245 LGI--RMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred HHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 322 223333444444444433210 01111 11346788999998
No 302
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.28 E-value=3.3e-10 Score=114.73 Aligned_cols=240 Identities=13% Similarity=0.069 Sum_probs=140.9
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
+..+|....|+++|+..-.+ .. .++++||++|+..++... ...++.||+.++.|.+......... ..
T Consensus 60 R~gnPt~~~Le~~la~le~~-~~-~v~~sSG~aAi~~~l~al--l~~GD~Vlv~~~~Y~~~~~l~~~~l---------~~ 126 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEGS-AG-TILVPSGLAAVTVPFLGF--LSPGDHALIVDSVYYPTRHFCDTML---------KR 126 (395)
T ss_pred CCCChHHHHHHHHHHHHhCC-CC-EEEECcHHHHHHHHHHHh--cCCCCEEEEccCCcHHHHHHHHHHH---------Hh
Confidence 45678888899999877532 33 457777999999998543 3467889999999987543221110 01
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|+.....+. .+ .+.+++.+. +++.+|++|...++.+.+.+ +++|.++|+++|+++|+|++
T Consensus 127 ~Gi~v~~vd~-------~~----~e~l~~al~----~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t 187 (395)
T PRK05967 127 LGVEVEYYDP-------EI----GAGIAKLMR----PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNT 187 (395)
T ss_pred cCeEEEEeCC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECC
Confidence 1332222110 11 245666664 25678999976666666665 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCCEEE--eeccccC--CccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHh
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ 372 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~ 372 (447)
+.... .+.....-.||++ +.|.++| ..-.|+++.+++..+.+.......--..+|..+...+..|+.+.
T Consensus 188 ~a~p~-------~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl~ 260 (395)
T PRK05967 188 WATPL-------YFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRTMG 260 (395)
T ss_pred ccCce-------ecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcccHH
Confidence 96421 1122223357775 6799886 36778788888765555321111111245776666555554432
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHH-HhcCCe----------eeEeecceeEEEEEe
Q 013235 373 --KDKLQNNAHVVGSYLKERLTALK-DKYGII----------GDVRGRGFLLGVEFV 416 (447)
Q Consensus 373 --~~~l~~~~~~~g~~l~~~L~~l~-~~~~~i----------~~vrg~Gl~~giel~ 416 (447)
=+...++..++.++|.+.= .+. -.||.+ ....|.|-|+.|++.
T Consensus 261 lR~~~~~~na~~lA~~L~~hp-~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 261 IRLEHHRKSALEIARWLEGRP-DVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 1223344444444443320 000 011110 112467889999995
No 303
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.27 E-value=1.7e-09 Score=110.76 Aligned_cols=271 Identities=11% Similarity=0.019 Sum_probs=157.4
Q ss_pred chHHHHHHHHHHHhCCCC-CceEEEcCCHH-HHHHHHHHHHHhhc-CCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 140 NHAIADFAEALASKMPGN-LKVVFFTNSGT-EANELAIMMARLYT-GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~-~~~v~~~~sGs-eA~e~Aik~ar~~t-~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
.....++.+.+++.++.. .+.++++++|| .++.+++..++... +.+.||+...+ |-.+..++...+..
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t-h~S~~kAi~~~G~~-------- 174 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID-QKSCIKAISTAGFE-------- 174 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC-hHHHHHHHHHcCCe--------
Confidence 344556777777777532 23688999999 79999988777532 34677877776 65666665554321
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
...++. ......|.-| .++|++.|....++.+.+++..|..+..|...+ +++|.++|++||+++|+|++
T Consensus 175 --pv~Vd~-~~d~~~~~iD----~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaA 243 (444)
T TIGR03531 175 --PRVIET-VLDGDELTTD----VEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNA 243 (444)
T ss_pred --EEEeee-eecCcCCCcC----HHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECc
Confidence 112221 0011123345 677888887433356778887776443333333 99999999999999999999
Q ss_pred ccCccccCCCcccccccCC-CCCEEEe--eccccC-Ccccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 297 QAGFARTGSHFWGFEAHGV-VPDIVTM--AKGIGN-GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv-~pDivt~--sK~lg~-G~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
|......-.++. -..... ..|++++ .|.+.. |. -|++++ ++++++.+... +...... .....+....+ .+
T Consensus 244 yg~~~~~~~~~~-~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~-y~g~~~~-s~~~~~~~~ll-~~ 318 (444)
T TIGR03531 244 YGLQSNKYMELI-NKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKS-YPGRASA-SPSLDVLITLL-SL 318 (444)
T ss_pred CcCcChhhhhhh-hccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHh-ccCCCCC-hHHHHHHHHHH-Hh
Confidence 963211000010 011112 3588875 488763 22 233445 67777766542 1122222 22333333333 23
Q ss_pred hh---hhHHHHHHHHHHHHHHHHHHHHHhcCC-eeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCc
Q 013235 372 QK---DKLQNNAHVVGSYLKERLTALKDKYGI-IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICA 441 (447)
Q Consensus 372 ~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~-i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gv 441 (447)
-. +++.++..++.+++.+.|.++.++++. +.+++..-.-+++.+..-. +.....+-..|+.++|
T Consensus 319 G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~------~~~~~~~g~~l~~~~v 386 (444)
T TIGR03531 319 GSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK------GKDPTMLGSMLYSRRV 386 (444)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc------ccCHHHHHHHHHhCCC
Confidence 22 346677788889999999999988864 4555555555666664211 1113456667777766
No 304
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.27 E-value=4.7e-10 Score=115.35 Aligned_cols=162 Identities=22% Similarity=0.246 Sum_probs=105.8
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
++.++...+|+++|+++.+. +..++++||+.|+.+++... ...++.||+....|.+ +...+... ...
T Consensus 65 r~~~p~~~~Le~~lA~l~g~--~~av~~sSG~aAi~~al~al--l~~Gd~Vv~~~~~y~~-t~~~~~~~--------l~~ 131 (436)
T PRK07812 65 RIMNPTQDVVEQRIAALEGG--VAALLLASGQAAETFAILNL--AGAGDHIVSSPRLYGG-TYNLFHYT--------LPK 131 (436)
T ss_pred CCCCchHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHH--hCCCCEEEEeCCcchH-HHHHHHHH--------hhc
Confidence 34477788999999998853 55788999999999999643 2356788887776643 32221100 011
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|+.....+++ .| .+++++.+. + ++.+|++|.+.++.|.+.+ +++|.++|+++|+++|+|++
T Consensus 132 ~Gi~v~~vdd~------~d----~e~l~~ai~---~-~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t 193 (436)
T PRK07812 132 LGIEVSFVEDP------DD----LDAWRAAVR---P-NTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNT 193 (436)
T ss_pred CeEEEEEECCC------CC----HHHHHHhCC---C-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECC
Confidence 23333322211 12 456666554 2 5679999999999999988 99999999999999999998
Q ss_pred ccCccccCCCcccccccCCCCCEEE--eeccccC-C-ccccccc
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVV 336 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~ 336 (447)
+.. +... .....-.|+++ +.|.++| | .-.|+++
T Consensus 194 ~a~-~~~~------~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 194 IAT-PYLI------RPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred Ccc-cccC------CchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 852 2111 11223468875 6799985 4 3334444
No 305
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.26 E-value=3e-09 Score=107.29 Aligned_cols=280 Identities=19% Similarity=0.178 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 118 p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
.+..+++.+.++..+.+. ..+...+++++++++++ .+.++.++||+.|+.+|++... ..++++||+..-+|.+.
T Consensus 5 ~e~~~~v~~~l~s~~~~~---~g~~~~~fE~~~a~~~g--~~~~~~~~sgt~Al~~al~~l~-~~~gdeVi~p~~t~~~~ 78 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST---YGPYVEEFEKEFAEYFG--VKYAVAVSSGTSALHLALRALG-LGPGDEVIVPAYTFPAT 78 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS---SSHHHHHHHHHHHHHHT--SSEEEEESSHHHHHHHHHHHTT-GGTTSEEEEESSS-THH
T ss_pred HHHHHHHHHHHHhCCccC---CCHHHHHHHHHHHHHhC--CCeEEEeCChhHHHHHHHHhcC-CCcCceEecCCCcchHH
Confidence 345666777776653221 15778899999999994 6789999999999999999643 44678999988888655
Q ss_pred chhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChH
Q 013235 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (447)
Q Consensus 198 ~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l 277 (447)
....+..+ ...+... .....+..| .+++++.+.. ++.+|++-...| .... +
T Consensus 79 ~~ai~~~G-------------~~pv~~D-i~~~~~~id----~~~~~~~i~~----~t~ai~~~h~~G---~~~d----~ 129 (363)
T PF01041_consen 79 ASAILWAG-------------AEPVFVD-IDPETLNID----PEALEKAITP----KTKAILVVHLFG---NPAD----M 129 (363)
T ss_dssp HHHHHHTT--------------EEEEE--BETTTSSB-----HHHHHHHHHT----TEEEEEEE-GGG---B-------H
T ss_pred HHHHHHhc-------------cEEEEEe-ccCCcCCcC----HHHHHHHhcc----CccEEEEecCCC---Cccc----H
Confidence 54444332 2222111 111123334 6778888873 456777665554 3333 9
Q ss_pred HHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee----ccccCCccccccccC-HHHHHhhcC---Cc
Q 013235 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTR---RN 349 (447)
Q Consensus 278 ~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pigav~~~-~~i~~~l~~---~~ 349 (447)
++|.++|+++|++||.|=+|+ +|- .+.-...|-.-|+.+|| |.+..|= -|+++++ +++.+.+.. ..
T Consensus 130 ~~i~~~~~~~~i~lIeD~a~a-~g~----~~~g~~~G~~gd~~~fSf~~~K~i~~ge-GG~v~~~~~~~~~~~~~~~~~g 203 (363)
T PF01041_consen 130 DAIRAIARKHGIPLIEDAAQA-FGA----RYKGRPVGSFGDIAIFSFHPTKIITTGE-GGAVVTNDPELAERARALRNHG 203 (363)
T ss_dssp HHHHHHHHHTT-EEEEE-TTT-TT-----EETTEETTSSSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTT
T ss_pred HHHHHHHHHcCCcEEEccccc-cCc----eeCCEeccCCCCceEecCCCCCCCcCCC-CeeEEecHHHHHHHhhhhhccC
Confidence 999999999999999999997 432 11113345556999987 9886321 1567765 555544432 11
Q ss_pred --------------ccccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc--CCeee-EeecceeEE
Q 013235 350 --------------YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY--GIIGD-VRGRGFLLG 412 (447)
Q Consensus 350 --------------~~~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~--~~i~~-vrg~Gl~~g 412 (447)
.+..|..+++..+.+++.|+.+++ ..++-+++.+++++.|..+..-. +.... .+.....+.
T Consensus 204 ~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~--~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~ 281 (363)
T PF01041_consen 204 RSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDE--IIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFP 281 (363)
T ss_dssp EETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHH--HHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEE
T ss_pred cCccccccccccccCCcccccHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCccccccccccccccccccc
Confidence 112344568899999999987643 44555666677777766653110 00011 111222333
Q ss_pred EEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 413 VEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 413 iel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
+.+.+... ....++.+.|.++||-+..-
T Consensus 282 i~~~~~~~------~~rd~l~~~L~~~GI~~~~~ 309 (363)
T PF01041_consen 282 IRLPDEAL------ADRDELVEALRARGIETRPH 309 (363)
T ss_dssp EEETCCGC------STHHHHHHHHHHTTBEEBCS
T ss_pred cccccccc------chHHHHHHHHHHCCCccccc
Confidence 43322100 12467999999999987654
No 306
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.25 E-value=3.1e-09 Score=111.05 Aligned_cols=288 Identities=18% Similarity=0.187 Sum_probs=156.3
Q ss_pred CCCHHHHHHHHHHHHhccccc------ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh------c
Q 013235 115 HCHPYVVDSIVNQIKRIQHST------VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------T 182 (447)
Q Consensus 115 h~~p~v~~A~~~~l~~~~~~~------~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~------t 182 (447)
|.+|.+.+++.+......++. ..+....+.++.+.++++++.+ +..++.++|+.+...++.+++.+ +
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~-~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~ 159 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD-AVTLQPAAGAHGELTGLLMIRAYHEARGDT 159 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC-ceEEEeCcHHHHHHHHHHHHHHHhhccCcC
Confidence 467888888876522222111 0112244567778888887543 33555678887777666554432 1
Q ss_pred CCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEE-c
Q 013235 183 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLS-E 261 (447)
Q Consensus 183 ~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~-E 261 (447)
++++|++.++.|+ ......... |+..+..|.. ..+..| .++|++.+. + ++++|++ .
T Consensus 160 ~~~~Vlv~~~~hp-~~~~~~~~~------------G~~vv~v~~~--~~~~~D----~e~L~~~i~---~-~t~~V~v~~ 216 (481)
T PRK04366 160 KRTEVIVPDSAHG-TNPASAAMA------------GFKVVEIPSN--EDGLVD----LEALKAAVG---E-DTAALMLTN 216 (481)
T ss_pred CCCEEEEcCCccH-hHHHHHHHc------------CCEEEEeecC--CCCCcC----HHHHHhhcc---c-CCeEEEEeC
Confidence 3457887777554 333332221 2222222221 112234 566766664 2 3455544 4
Q ss_pred cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--cccc-----CCccccc
Q 013235 262 SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG-----NGIPLGA 334 (447)
Q Consensus 262 pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg-----~G~piga 334 (447)
|. .+|.+. .-+++|.++|+++|+++|+|+++. .+-.| .. ....+| .|+++++ |.++ ||--+|+
T Consensus 217 Pn--~tG~~~---~dl~eI~~~a~~~gal~iVD~a~~-~~~~g-~~-~~~~~G--aD~~~~~~hK~l~~P~g~Ggp~~G~ 286 (481)
T PRK04366 217 PN--TLGLFE---RNILEIAEIVHEAGGLLYYDGANL-NAILG-KA-RPGDMG--FDVVHLNLHKTFSTPHGGGGPGSGP 286 (481)
T ss_pred CC--Cccccc---hHHHHHHHHHHHcCCEEEEEecCh-hhhcc-cC-CccccC--CCEEEEechhhcCCCCCCCCCCeee
Confidence 43 556541 238999999999999999999984 33233 11 122334 4988653 8876 2334677
Q ss_pred cccCHHHHHhhcCCc----------------c---cccCCCChHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHH
Q 013235 335 VVTTPEIAEVLTRRN----------------Y---FNTFGGNPVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLT 392 (447)
Q Consensus 335 v~~~~~i~~~l~~~~----------------~---~~T~~~np~a~aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~ 392 (447)
+.+++++.+.+.... | .-.+.++.+.+.++...+..+-.+++. ++..++.++|+++|+
T Consensus 287 l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~ 366 (481)
T PRK04366 287 VGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLK 366 (481)
T ss_pred eeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 778888777663210 0 112233445555566666655555443 556677899999998
Q ss_pred HHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 393 ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 393 ~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
++ +.+..+ +..+..-+.+...-..+ .....++.+.|.++||.++
T Consensus 367 ~~---~~~~~~----~~~~~~~~~~~~~~~~~-g~~~~~v~~~L~~~Gi~~~ 410 (481)
T PRK04366 367 DI---YDLPYD----RPCMHEFVLSGKKLKET-GVRTLDIAKRLLDYGFHPP 410 (481)
T ss_pred hh---CcccCC----CCeeEEEEEECcccccc-CCCHHHHHHHHHHCCccCC
Confidence 86 332211 11111111111100000 0124679999999998865
No 307
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.25 E-value=4.2e-10 Score=114.08 Aligned_cols=192 Identities=17% Similarity=0.089 Sum_probs=119.7
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCC
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g 218 (447)
.++...+|+++|+++.+. +.+++++||+.|+..++.+ ...++.||+.+..|.+........ ....|
T Consensus 45 ~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~l---l~~Gd~Vl~~~~~y~~~~~~~~~~---------~~~~G 110 (378)
T TIGR01329 45 GNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITRL---LNNGDEIIAGDDLYGGTDRLLTQV---------VPRSG 110 (378)
T ss_pred CChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHH---hCCCCEEEEcCCCchHHHHHHHHH---------HHHcC
Confidence 466678899999998854 5677889999999877653 345678888887775432211000 00113
Q ss_pred eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc
Q 013235 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA 298 (447)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 298 (447)
+.....+. .| .+++++.++ .++.+|++|...++.|.+.+ +++|.++|+++|+++|+|+++.
T Consensus 111 ~~v~~vd~-------~d----~~~le~~i~----~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~ 171 (378)
T TIGR01329 111 VVVVHVDT-------TD----LDKVKAALG----PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMM 171 (378)
T ss_pred cEEEEeCC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCc
Confidence 33322221 12 456776664 26778999988888888886 9999999999999999999973
Q ss_pred CccccCCCcccccccCCCCCEEE--eeccccC--CccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 299 GFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 299 Gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
.+... ...+.-.|+++ ..|.++| +...|+++++ +++.+.+.......-...+|..+..++..|+.
T Consensus 172 -~~~~~------~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t 241 (378)
T TIGR01329 172 -SPLLC------NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT 241 (378)
T ss_pred -ccccC------ChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC
Confidence 21111 11122358886 5699975 3567888774 45545444221111233457766655554443
No 308
>PRK05939 hypothetical protein; Provisional
Probab=99.25 E-value=7.7e-10 Score=112.70 Aligned_cols=163 Identities=17% Similarity=0.182 Sum_probs=108.7
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +..+.++||+.|+..++... ...++.||+.+..|.+.......+.
T Consensus 42 ~r~g~p~~~~lE~~la~leg~--~~~v~~ssG~~Ai~~~l~al--l~~Gd~Vv~~~~~y~~t~~~~~~l~---------- 107 (397)
T PRK05939 42 ARQGTPTTAALEAKITKMEGG--VGTVCFATGMAAIAAVFLTL--LRAGDHLVSSQFLFGNTNSLFGTLR---------- 107 (397)
T ss_pred CCCCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHH--cCCCCEEEECCCccccHHHHHHHHH----------
Confidence 344578888999999998854 44667889999999998754 2356788887776644322111110
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.+. +++.+|++|.+.++.|.+.+ +++|.++|+++|+++|+|+
T Consensus 108 ~~G~~v~~v~~-------~d----~e~l~~~l~----~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~ 168 (397)
T PRK05939 108 GLGVEVTMVDA-------TD----VQNVAAAIR----PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDN 168 (397)
T ss_pred hcCCEEEEECC-------CC----HHHHHHhCC----CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEEC
Confidence 11332222211 12 466777664 25778999998999998876 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEE--EeeccccC-CccccccccC
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLGAVVTT 338 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pigav~~~ 338 (447)
+|.. + .. ++......|++ +++|.+++ |-.+|+++..
T Consensus 169 t~a~----~-~~--~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 169 TMTS----P-WL--FRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred Cccc----c-cc--cCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 9852 1 11 12222235777 47899996 7777776653
No 309
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.24 E-value=1.4e-09 Score=106.85 Aligned_cols=263 Identities=14% Similarity=0.060 Sum_probs=165.4
Q ss_pred eEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHH
Q 013235 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~ 239 (447)
.++.+|+-+.+.+.+++++.. ..+.|++-+.+|-+.... +...|+..+|.+.... |.+
T Consensus 126 diiit~G~t~~l~~~l~~~~N--~gd~vlie~~ty~~AL~s-------------~~a~gv~~ipv~md~~---Gi~---- 183 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN--RGDHVLIEEYTYPSALQS-------------MEALGVKIIPVKMDQD---GID---- 183 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc--CCCceEEecccchHHHHh-------------ccccCceEEeccccCC---CCC----
Confidence 588999999999999997754 456677777777432221 1123666776654322 233
Q ss_pred HHHHHHHHHccCC-----CCeEEEEEcc-ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcccc---CC-----
Q 013235 240 AKDVQDLIDFGTS-----GHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART---GS----- 305 (447)
Q Consensus 240 ~~~le~~i~~~~~-----~~~aavi~Ep-i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~---G~----- 305 (447)
.+.|++++..-.+ .+......=| -|+++|... +.+--++|.+|+|+|++++|.||+|--+-.. ++
T Consensus 184 pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~ 262 (472)
T KOG0634|consen 184 PESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELES 262 (472)
T ss_pred HHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccC
Confidence 5667777764211 1355566666 888888765 7888899999999999999999998533211 11
Q ss_pred Cccc--------------ccccCCCCCEEEeeccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 306 HFWG--------------FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 306 ~~~~--------------~~~~gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
.-.. .+..|-+.-+-+|||-++.|+|+|++.+++.+++..-......|-+-+.+++...-+.|+..
T Consensus 263 p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~w 342 (472)
T KOG0634|consen 263 PAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRW 342 (472)
T ss_pred ccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHH
Confidence 0000 01111111223799999999999999999988776655445567777778888888888877
Q ss_pred hhhhHHHHHHHHHHHH---HHHHHHHHHhc-CC---eeeEeecceeEEEEEeeCC-CCCCCCHHHHHHHHHHHHhCCcee
Q 013235 372 QKDKLQNNAHVVGSYL---KERLTALKDKY-GI---IGDVRGRGFLLGVEFVTDR-QLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 372 ~~~~l~~~~~~~g~~l---~~~L~~l~~~~-~~---i~~vrg~Gl~~giel~~~~-~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
-++++++.+.++.... +..+.....++ +. ...++-.|+|++|++.-.. .++..-++.-..+...+.++||++
T Consensus 343 gqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~ 422 (472)
T KOG0634|consen 343 GQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKL 422 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEE
Confidence 6776655555544322 22333333333 32 2235677999999995111 011111223345666888999987
Q ss_pred ec
Q 013235 444 FS 445 (447)
Q Consensus 444 ~~ 445 (447)
-.
T Consensus 423 v~ 424 (472)
T KOG0634|consen 423 VC 424 (472)
T ss_pred ec
Confidence 53
No 310
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.24 E-value=1.1e-09 Score=112.74 Aligned_cols=161 Identities=20% Similarity=0.195 Sum_probs=108.1
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.++...+|+++|+++.+. +.+++++||++|+.+++... ...++.||+....|++........ ..
T Consensus 59 ~R~~~p~~~~le~~lA~l~g~--~~av~~sSGt~Al~~al~~l--l~~Gd~Vi~~~~~y~~t~~~~~~~---------l~ 125 (433)
T PRK08134 59 SRISNPTVAVLEERVAALEGG--VGAIATASGQAALHLAIATL--MGAGSHIVASSALYGGSHNLLHYT---------LR 125 (433)
T ss_pred ecCcChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCccHHHHHHHHHH---------Hh
Confidence 345678889999999999854 34789999999999998754 335678888888887543222110 01
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
..|+.....+. .| .+++++.|.. ++.+|++|.+.++.|.+.+ +++|.++|+++|+++|+|.
T Consensus 126 ~~Gi~v~~vd~-------~d----~~~l~~~i~~----~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~ 186 (433)
T PRK08134 126 RFGIETTFVKP-------GD----IDGWRAAIRP----NTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDS 186 (433)
T ss_pred hCCeEEEEECC-------CC----HHHHHHhcCC----CCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEEC
Confidence 12333322211 12 5677777652 5678899988888888887 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEEee--ccccC-Ccccccc
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN-GIPLGAV 335 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~-G~pigav 335 (447)
+|. +| .. ......-.|++++| |-++| |--+|.+
T Consensus 187 t~a----~~-~~--~~pl~~GaD~vv~S~tK~l~g~g~~~gG~ 222 (433)
T PRK08134 187 TFT----TP-YL--LRPFEHGADLVYHSATKFLGGHGTAIGGV 222 (433)
T ss_pred CCc----cc-cc--CCchhcCCCEEEeccccccCCCCCceEEE
Confidence 985 22 11 11123345888755 88874 4334443
No 311
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.24 E-value=3.1e-09 Score=109.19 Aligned_cols=182 Identities=12% Similarity=0.042 Sum_probs=111.1
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccC--CCC
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVP 317 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~g--v~p 317 (447)
.+++++++... +. .+|+-.....++ ..+ +++|+++|+++|+++++|++|+ +|-.|..... +.++ -..
T Consensus 209 ~d~l~~~~~~~---~p-lvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~-~~~~~~~~~ 277 (493)
T PRK13580 209 YDEIAALAREF---KP-LILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFT-GDEDPVPHA 277 (493)
T ss_pred HHHHHHHHhhc---CC-EEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccch-hhcCCCCCC
Confidence 56777777642 33 333434444444 444 9999999999999999999995 6544311211 1111 146
Q ss_pred CEEE--eeccccCCccccccccCHHHHHhhcCCcccccCCC--ChHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHH
Q 013235 318 DIVT--MAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGG--NPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKER 390 (447)
Q Consensus 318 Divt--~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~--np~a~aaala~L~~i~~~---~l~~~~~~~g~~l~~~ 390 (447)
|+++ ++|++.|.. -|++++++++.+.+.... ...|++ +| ..+++..++..+.++ ++.+++.++.++|++.
T Consensus 278 D~vtgT~hKaL~GP~-GG~I~~~~~l~~~L~~a~-P~i~gg~l~p-~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~ 354 (493)
T PRK13580 278 DIVTTTTHKTLRGPR-GGLVLAKKEYADAVDKGC-PLVLGGPLPH-VMAAKAVALAEARTPEFQKYAQQVVDNARALAEG 354 (493)
T ss_pred cEEEeCChhhccCCC-eEEEEecHHHHHHHhhCC-CcccCCCccH-HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 8774 679995421 367888999988885332 233443 34 333333345555433 3789999999999999
Q ss_pred HHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 391 L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
|.+. .++++.. ....-++.|.+.+. ......+.+.|.+.||++..
T Consensus 355 L~~~--G~~vv~g-gTdshIV~V~lg~~-------~~~g~~a~~~L~e~GI~vn~ 399 (493)
T PRK13580 355 FLKR--GARLVTG-GTDNHLVLIDVTSF-------GLTGRQAESALLDAGIVTNR 399 (493)
T ss_pred HHhc--CCCccCC-CCCCCEEEEEeCCH-------HHHHHHHHHHHHHCCeEEcc
Confidence 9886 4443321 02345666666322 11123566789999999864
No 312
>PLN02509 cystathionine beta-lyase
Probab=99.24 E-value=5.2e-10 Score=115.55 Aligned_cols=231 Identities=14% Similarity=0.081 Sum_probs=142.3
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCC
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g 218 (447)
.++...+++++++++.+ .+.+++++||+.|+.+++.+ ...++.||+.+..|.+......... ...|
T Consensus 131 gnpt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~l---l~~GD~VI~~~~~y~~t~~ll~~~l---------~~~G 196 (464)
T PLN02509 131 GNPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTHL---IKNGEEIVAGDDVYGGSDRLLSQVV---------PRSG 196 (464)
T ss_pred CCHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHHH---hCCCCEEEEcCCchhhHHHHHHHHH---------HHCC
Confidence 46788899999999874 45677889999988655532 3466889998988865432211100 0113
Q ss_pred eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc
Q 013235 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA 298 (447)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 298 (447)
+.....+. .| .+++++.+. + ++.+|++|.+.++.|.+.+ +++|.++|++||+++|+||++.
T Consensus 197 ~~v~~vd~-------~d----~e~l~~ai~---~-~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a 257 (464)
T PLN02509 197 VVVKRVNT-------TN----LDEVAAAIG---P-QTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIM 257 (464)
T ss_pred eEEEEeCC-------CC----HHHHHHhCC---c-CCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcc
Confidence 32222211 22 456666653 2 5678889988888888765 9999999999999999999984
Q ss_pred CccccCCCcccccccCCCCCEEE--eeccccC-C-ccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh
Q 013235 299 GFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (447)
Q Consensus 299 Gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~ 373 (447)
.+..+ ...+...|+++ ++|.++| | .-.|+++++ +++.+.+...........+|..++.++..|+.+..
T Consensus 258 -~~~~~------~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL~~ 330 (464)
T PLN02509 258 -SPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMAL 330 (464)
T ss_pred -ccccC------ChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhHHH
Confidence 32222 11233468885 5699986 3 334556554 44433322111111122468888888888887632
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCee------------------eEeecceeEEEEE
Q 013235 374 DKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEF 415 (447)
Q Consensus 374 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~Gl~~giel 415 (447)
.+++..+..+++.+.|++ ++.+. ...|.|-|+.+++
T Consensus 331 --R~~r~~~nA~~la~~L~~----~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~ 384 (464)
T PLN02509 331 --RIEKQQENARKIAMYLSS----HPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT 384 (464)
T ss_pred --HHHHHHHHHHHHHHHHhc----CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 445555555555555543 33332 2346788899988
No 313
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.22 E-value=2.2e-09 Score=108.50 Aligned_cols=247 Identities=19% Similarity=0.172 Sum_probs=148.1
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.++.+|....|+++|+++.++ +.++.++||..|+.+++.... ..++.|++....|+|........ .+
T Consensus 50 ~R~gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll--~~Gd~iv~~~~~Y~~t~~~~~~~---------l~ 116 (386)
T PF01053_consen 50 SRYGNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALL--KPGDHIVASDDLYGGTYRLLEEL---------LP 116 (386)
T ss_dssp TTTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS---TTBEEEEESSSSHHHHHHHHHC---------HH
T ss_pred eccccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhc--ccCCceEecCCccCcchhhhhhh---------hc
Confidence 456688999999999998753 667888999999999887443 24688999999997744332211 11
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC-CEEEEe
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG-GLCIAD 294 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g-~llI~D 294 (447)
..|+...... + .| .+++++.++. ++.+|++|+..++...++. +++|.++|+++| +++|+|
T Consensus 117 ~~gv~v~~~d-~------~d----~~~l~~~l~~----~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVD 177 (386)
T PF01053_consen 117 RFGVEVTFVD-P------TD----LEALEAALRP----NTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVD 177 (386)
T ss_dssp HTTSEEEEES-T------TS----HHHHHHHHCT----TEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEE
T ss_pred ccCcEEEEeC-c------hh----HHHHHhhccc----cceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEee
Confidence 1244332211 0 22 5778887753 7899999998888777776 999999999999 999999
Q ss_pred ccccCccccCCCcccccccCCCCCEEE--eeccccC-C-ccccccccCH--HHHHhhcCCcccccCCC--ChHHHHHHHH
Q 013235 295 EVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTTP--EIAEVLTRRNYFNTFGG--NPVCTAAGHA 366 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pigav~~~~--~i~~~l~~~~~~~T~~~--np~a~aaala 366 (447)
...... +.++.+..-.||++ +.|-++| | .-.|+++++. ++++.+... ...++. +|..+...+.
T Consensus 178 nT~atp-------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~--~~~~G~~~~p~da~ll~r 248 (386)
T PF01053_consen 178 NTFATP-------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF--RRLLGATLSPFDAWLLLR 248 (386)
T ss_dssp CTTTHT-------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH--HHHHT-B--HHHHHHHHH
T ss_pred ccccce-------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcch--hhhcCccchHHHHHHHhc
Confidence 987421 11222223368886 5699985 3 5677777654 677665421 122222 3555554444
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEe------------------ecceeEEEEEeeCCCCCCCCHHH
Q 013235 367 VLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR------------------GRGFLLGVEFVTDRQLKTPAKAE 428 (447)
Q Consensus 367 ~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr------------------g~Gl~~giel~~~~~~~~p~~~~ 428 (447)
.|+.+. -.+++..+.+..+ .+..++|+.+..|. |.|-|+.|+|.... +.
T Consensus 249 gl~Tl~--~R~~~~~~nA~~l----A~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~-------~~ 315 (386)
T PF01053_consen 249 GLRTLP--LRMERQNENAEAL----AEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE-------EA 315 (386)
T ss_dssp HHTTHH--HHHHHHHHHHHHH----HHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH-------HH
T ss_pred CCCcHH--HHHHHHHHHHHHH----HHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch-------hh
Confidence 443321 1123333333333 33334566666554 66679999995431 24
Q ss_pred HHHHHHHH
Q 013235 429 TLYIMDKM 436 (447)
Q Consensus 429 ~~~~~~~l 436 (447)
+.++.+.|
T Consensus 316 ~~~f~~~l 323 (386)
T PF01053_consen 316 ARRFLDAL 323 (386)
T ss_dssp HHHHHHH-
T ss_pred hHhHHhhh
Confidence 55666655
No 314
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.21 E-value=1.9e-09 Score=110.33 Aligned_cols=153 Identities=18% Similarity=0.133 Sum_probs=102.9
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCC
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~ 217 (447)
..+|...+|+++|+++.++ +.++.++||+.|+.+++... ...++.||+...+|.+........ ....
T Consensus 58 ~~nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~al--l~~GD~VI~~~~~Y~~T~~~~~~~---------l~~~ 124 (432)
T PRK06702 58 IGNPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNI--CSSGDHLLCSSTVYGGTFNLFGVS---------LRKL 124 (432)
T ss_pred CCCcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHh--cCCCCEEEECCCchHHHHHHHHHH---------HHHC
Confidence 3478899999999999854 45778999999999999744 245688999999986544321110 0011
Q ss_pred CeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc
Q 013235 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (447)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 297 (447)
|+..... + +..| .+++++.|.. ++.+|++|...++.+.+.. +++|.++|+++|+++|+|+++
T Consensus 125 Gi~v~~v-d-----~~~d----~~~l~~~I~~----~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T~ 186 (432)
T PRK06702 125 GIDVTFF-N-----PNLT----ADEIVALAND----KTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNTL 186 (432)
T ss_pred CCEEEEE-C-----CCCC----HHHHHHhCCc----CCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECCC
Confidence 3322211 0 1113 4667777752 5668888986666676666 999999999999999999997
Q ss_pred cCccccCCCcccccccCCCCCEEE--eeccccC
Q 013235 298 AGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN 328 (447)
Q Consensus 298 tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~ 328 (447)
. +. ..++-+..-.||++ ++|-++|
T Consensus 187 ~----tP---~~~~pl~~GADIvv~S~TKy~~G 212 (432)
T PRK06702 187 A----TP---YLCQAFEHGANIIVHSTTKYIDG 212 (432)
T ss_pred C----ch---hhCChhhcCCCEEEEccccccCC
Confidence 3 22 22333334458775 7798875
No 315
>PRK04311 selenocysteine synthase; Provisional
Probab=99.20 E-value=3.4e-09 Score=109.51 Aligned_cols=222 Identities=16% Similarity=0.117 Sum_probs=128.2
Q ss_pred CHHHHHHHHHHHHhcccccc----cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcC
Q 013235 117 HPYVVDSIVNQIKRIQHSTV----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN 192 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~~~~~~----~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~ 192 (447)
++++.+|+.+.+..+..... .-..+...++++.|+++++. +.++++|||+.|+..++.. ..++++||+.++
T Consensus 99 ~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--e~a~vv~sgtaAl~l~l~~---l~~GdeVIvs~~ 173 (464)
T PRK04311 99 SEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--EDALVVNNNAAAVLLALNA---LAAGKEVIVSRG 173 (464)
T ss_pred CHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHH---hCCCCEEEEcch
Confidence 58999999988776531110 01123456788999988853 4678899999999988853 245678888776
Q ss_pred Ccc--cCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccC--CCc
Q 013235 193 AYH--GNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQG--VGG 268 (447)
Q Consensus 193 ~yH--G~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~--~gG 268 (447)
.+. |.+..... .....|+.........+ .+ .+++++.+. + ++++++++...+ ..|
T Consensus 174 e~~~~ggs~~i~~---------~~~~~G~~l~~v~~~~~----t~----~~dle~aI~---~-~TklV~~vh~sN~~i~G 232 (464)
T PRK04311 174 ELVEIGGAFRIPD---------VMRQAGARLVEVGTTNR----TH----LRDYEQAIN---E-NTALLLKVHTSNYRIEG 232 (464)
T ss_pred hhhhcCcchhhHH---------HHHHCCcEEEEECCCCC----CC----HHHHHHhcC---c-cCeEEEEEcCCCccccc
Confidence 433 22211000 00112333322211000 12 567777764 2 456666665433 234
Q ss_pred e--eeCCCChHHHHHHHHHHhCCEEEEeccccCccccC-----CCcccccccCCCCCEEEee--ccccCCccccccccCH
Q 013235 269 I--IELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG-----SHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTP 339 (447)
Q Consensus 269 ~--~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G-----~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~ 339 (447)
. ..+ +++|.++|++||+++|+|....-++-.+ ......+....-.|++++| |.++|.. .|++++++
T Consensus 233 ~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~~ 307 (464)
T PRK04311 233 FTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGKK 307 (464)
T ss_pred cCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEEEcH
Confidence 2 334 9999999999999999999421111111 0111111122346999998 9988653 78888999
Q ss_pred HHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 340 EIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 340 ~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
++++.+......-.+..+-...++-.++|.
T Consensus 308 ~li~~l~~~~~~r~lr~dk~~l~~l~~~l~ 337 (464)
T PRK04311 308 ELIARLKKHPLKRALRVDKLTLAALEATLR 337 (464)
T ss_pred HHHHHHhhchhHHHHhcchHHHHHHHHHHH
Confidence 999877643333333334444455555554
No 316
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.18 E-value=6.5e-09 Score=105.44 Aligned_cols=285 Identities=14% Similarity=0.119 Sum_probs=155.5
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Ai 175 (447)
....|||+.+-.++ +...++- .......-..| -++...+|.+++++.+ +.+.+++++||+.|...+.
T Consensus 36 ~~~v~iDLltDsgT-------~aMs~~q---~a~~~~GDe~yag~~s~~~lE~~va~~~--G~~~av~v~sGT~Al~ll~ 103 (450)
T TIGR02618 36 SEDVYIDLLTDSGT-------NAMSDKQ---WAGLMMGDEAYAGSRNFYHLERTVRELY--GFKYVVPTHQGRGAENLLS 103 (450)
T ss_pred cCceEEEcccCCCc-------HHHHHHH---HHHhhhcchhhcCCCcHHHHHHHHHHHH--CCCeEEEcCCHHHHHHHHH
Confidence 34589999976654 3333331 22221111123 3667789999999999 4678999999999977643
Q ss_pred HHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC---CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCC
Q 013235 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ---TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252 (447)
Q Consensus 176 k~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~---~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~ 252 (447)
....++.+.| ..+.|.-.+.......+. .+ .+.+. .+.. ..++.. ++-| .++|++.|.....
T Consensus 104 ---~l~l~pGDeV-psn~~f~Tt~ahIe~~Ga-v~-vDi~~dea~~~~---~~~p~~--GniD----~~~Le~aI~~~~~ 168 (450)
T TIGR02618 104 ---QIAIKPGDYV-PGNMYFTTTRYHQEKNGA-TF-VDIIIDEAHDAQ---LNIPFK--GNVD----LKKLQKLIDEVGA 168 (450)
T ss_pred ---HhCCCCcCEE-CCceeHHHHHHHHHhCCe-EE-Eeeecccccccc---cCCCCC--CCcC----HHHHHHHhccccC
Confidence 2222333444 333332333222222221 00 00000 0000 011111 1224 6778888865333
Q ss_pred CCeEEEEEc-cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccc-------cCCCcccccc------cCCCCC
Q 013235 253 GHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR-------TGSHFWGFEA------HGVVPD 318 (447)
Q Consensus 253 ~~~aavi~E-pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr-------~G~~~~~~~~------~gv~pD 318 (447)
.+++.+.+| +++..||. +.+...+++++++|++||+.||.|-++. |+- .. ..+.... .--.-|
T Consensus 169 ~~~~lV~~e~t~N~~GG~-pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gNA~~I~~re~-g~~~~~i~ei~~e~~~~aD 245 (450)
T TIGR02618 169 DKIPYICLAVTVNLAGGQ-PVSMANMREVRELCEAHGIKVFYDATRC-VENAYFIKEREQ-GYEDKSIAEILKEMMSYAD 245 (450)
T ss_pred cccCceEEEEecccCCCe-eCCHHHHHHHHHHHHHcCCEEEEEccch-hhChhhhhcccc-cccCCCHHHHHHHHhccCc
Confidence 344555555 45444564 4577889999999999999999999875 321 00 0110000 011346
Q ss_pred EEEeecccc-CCcccccccc--CHHHHHhhcCC----cccccCCCChH-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 013235 319 IVTMAKGIG-NGIPLGAVVT--TPEIAEVLTRR----NYFNTFGGNPV-CTAAGHAVLKVIQKDKLQNNAHVVGSYLKER 390 (447)
Q Consensus 319 ivt~sK~lg-~G~pigav~~--~~~i~~~l~~~----~~~~T~~~np~-a~aaala~L~~i~~~~l~~~~~~~g~~l~~~ 390 (447)
. +++|+.- +|.|+|.+++ ++++++..... ..+.|+++=.- .+.+..-.|+...+..+.++.....++|.++
T Consensus 246 ~-~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~ 324 (450)
T TIGR02618 246 G-CTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDK 324 (450)
T ss_pred E-EEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 6 4556654 3567777665 67777766542 23356666222 2333333465554556677777778888888
Q ss_pred HHHHHHhcCCeeeEeecceeEEEEEe
Q 013235 391 LTALKDKYGIIGDVRGRGFLLGVEFV 416 (447)
Q Consensus 391 L~~l~~~~~~i~~vrg~Gl~~giel~ 416 (447)
|.+. ..+++. +..|.++.|+..
T Consensus 325 L~~~--Gvpv~~--p~ggh~V~vda~ 346 (450)
T TIGR02618 325 LKAA--GVPIVE--PVGGHAVFLDAR 346 (450)
T ss_pred HHHC--CCcccC--CCCcceEEEEhH
Confidence 8886 444433 445566666654
No 317
>PRK02769 histidine decarboxylase; Provisional
Probab=99.17 E-value=6.4e-09 Score=105.19 Aligned_cols=226 Identities=17% Similarity=0.138 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHhCCCCCce--EEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe
Q 013235 142 AIADFAEALASKMPGNLKV--VFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (447)
Q Consensus 142 ~~~elae~L~~~~~~~~~~--v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~ 219 (447)
...+..+.+++++..+.+. .+|+++|||+|..|+..+|.+.++.. |+....-|-+...+...-+. +.
T Consensus 66 ~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~-ii~s~~~H~Sv~ka~~~lg~----------~~ 134 (380)
T PRK02769 66 FERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGT-LYYSKDTHYSVSKIARLLRI----------KS 134 (380)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcE-EEeCCCceehHHHHHHHcCC----------CC
Confidence 4456667777777544333 48999999999999999987544444 44555556555444332221 11
Q ss_pred EeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC---CEEEEecc
Q 013235 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG---GLCIADEV 296 (447)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g---~llI~DEv 296 (447)
..++.... ..-| .++|++.+... ..++.+|++.-...+.|.+.| +++|.++|+++| +++.+|-+
T Consensus 135 ~~V~~~~~----g~id----~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA 201 (380)
T PRK02769 135 RVITSLPN----GEID----YDDLISKIKEN-KNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAA 201 (380)
T ss_pred ceeccCCC----CcCc----HHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEec
Confidence 22222111 1123 67788877654 335778888888888999988 999999999998 69999999
Q ss_pred ccCcccc---CCCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhcCC-c----ccccCCCC--hHHHHHH
Q 013235 297 QAGFART---GSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRR-N----YFNTFGGN--PVCTAAG 364 (447)
Q Consensus 297 ~tGfgr~---G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~-~----~~~T~~~n--p~a~aaa 364 (447)
|.|+-.- ....+.+.. ..|.++++ |-+++-.+.|+++.+++..+.+... . .-.|+.|. ..+.++.
T Consensus 202 ~gg~~~p~~~~~~~~d~~~---~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~l 278 (380)
T PRK02769 202 LSGMILPFVNNPPPFSFAD---GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLL 278 (380)
T ss_pred ccceeecccCccccCCccC---CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHH
Confidence 9874210 000122211 46988887 7665557889999988776655321 1 11244444 3455556
Q ss_pred HHHHHHHhhhh---HHHHHHHHHHHHHHHHHHH
Q 013235 365 HAVLKVIQKDK---LQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 365 la~L~~i~~~~---l~~~~~~~g~~l~~~L~~l 394 (447)
-++|+.+..++ ..+++.++.++|.++|++.
T Consensus 279 w~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~ 311 (380)
T PRK02769 279 WAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN 311 (380)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 67777776554 4567778888888888663
No 318
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.15 E-value=2e-09 Score=108.97 Aligned_cols=234 Identities=15% Similarity=0.107 Sum_probs=146.4
Q ss_pred ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 136 ~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
.+..+|....|+++|+++-+ .+.+++++||+.|+.+++... ...++.||+....|++........ ..
T Consensus 57 sR~~nPt~~~le~~la~LEg--~~~a~~~~SGmaAi~~~~~~l--l~~GD~Vv~~~~~Yg~t~~l~~~~---------l~ 123 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELEG--GAGCALYPCGAAAVANAILAF--VEQGDHVLMTGTAYEPTQDFCSKI---------LS 123 (395)
T ss_pred cCCCChhHHHHHHHHHHHhC--CCeEEEEhHHHHHHHHHHHHH--cCCCCEEEEeCCCcHHHHHHHHHH---------HH
Confidence 34467888899999998864 356778899999999988643 335678888777776554332110 01
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC--CEEEE
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG--GLCIA 293 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g--~llI~ 293 (447)
..|+.....+. .| .+++++.++ +++.+|++|.+.++.|.+.+ +++|.++|+++| +++|+
T Consensus 124 ~~Gi~v~~vd~-------~d----~~~l~~~l~----~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvV 184 (395)
T PRK08114 124 KLGVTTTWFDP-------LI----GADIAKLIQ----PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMI 184 (395)
T ss_pred hcCcEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEE
Confidence 12332221110 22 356777664 25789999999999999998 999999999985 99999
Q ss_pred eccccCccccCCCcccccccCCCCCEEEe--eccccC-C-ccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGN-G-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 294 DEv~tGfgr~G~~~~~~~~~gv~pDivt~--sK~lg~-G-~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
|.+++ +| .. ++-...-.|+++. .|.++| | .-.|+++.++++.+.+.......--..+|..+...+..|+
T Consensus 185 DnT~a----~p-~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~ 257 (395)
T PRK08114 185 DNTWA----AG-VL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLR 257 (395)
T ss_pred ECCCc----cc-cc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCC
Confidence 99985 23 22 3333344699875 599986 3 6778777788766554421111111235777666554444
Q ss_pred HHh--hhhHHHHHHHHHHHHHHHHHHHHHhcCCeee------------------EeecceeEEEEEe
Q 013235 370 VIQ--KDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (447)
Q Consensus 370 ~i~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~Gl~~giel~ 416 (447)
.+. =+...+++.++.++|+ +|+.+.. ..|.|-|+.+++.
T Consensus 258 TL~lR~~~~~~na~~va~~L~--------~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 258 TLGVRLRQHEESSLKVAEWLA--------EHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHH--------cCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 331 1223344444444443 2333321 2467889999985
No 319
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.14 E-value=2.2e-09 Score=109.32 Aligned_cols=193 Identities=18% Similarity=0.092 Sum_probs=118.9
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
+..++...+|+++|+++.+.. . .+.++||+.|+.+++.+ ...+++||+.++.|++......... ..
T Consensus 50 r~~~p~~~~le~~lA~l~g~~-~-~v~~~sG~~ai~~~l~~---l~~Gd~Vlv~~~~y~~~~~~~~~~~---------~~ 115 (390)
T PRK08064 50 RSGNPTREALEDIIAELEGGT-K-GFAFASGMAAISTAFLL---LSKGDHVLISEDVYGGTYRMITEVL---------SR 115 (390)
T ss_pred CCCChhHHHHHHHHHHHhCCC-C-eEEECCHHHHHHHHHHH---hCCCCEEEEccCccchHHHHHHHHH---------HH
Confidence 345677888999999988643 3 45679999999988852 2356789999998876543221110 00
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|+.....+. .| .+++++.+. .++.+|++|...++.|.+.+ +++|.++|+++|+++|+||+
T Consensus 116 ~G~~v~~v~~-------~d----~~~l~~~l~----~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a 176 (390)
T PRK08064 116 FGIEHTFVDM-------TN----LEEVAQNIK----PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNT 176 (390)
T ss_pred cCCEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECC
Confidence 1222222111 12 456666553 25678888888888888876 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCCEEE--eeccccC--Ccccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
|..+. .. . .. .+| .|+++ ++|.++| |.-.|++++ ++++++.+...........+|..+..++..++
T Consensus 177 ~~~~~-~~-~--~~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~ 247 (390)
T PRK08064 177 FLTPL-LQ-K--PL-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLK 247 (390)
T ss_pred CCccc-cc-C--ch-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC
Confidence 86431 11 1 11 123 58875 5699874 333465555 46777766532221122234555554444443
No 320
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.13 E-value=1.2e-08 Score=105.11 Aligned_cols=221 Identities=16% Similarity=0.142 Sum_probs=126.4
Q ss_pred CCHHHHHHHHHHHHhccccc----ccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEc
Q 013235 116 CHPYVVDSIVNQIKRIQHST----VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLR 191 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~----~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~ 191 (447)
-++++.+|+.+.+..+.... ..-....+.+++++|+++++. +..+++|||+.|+.+++.. ...+++||+.+
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~ga--e~alvv~sg~aAi~l~l~~---l~~GdeVIvs~ 167 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGA--EDALVVNNNAAAVLLALNT---LAKGKEVIVSR 167 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHH---hCCcCEEEECC
Confidence 46999999998887653100 001124457888999998854 4466789999999888853 34667888877
Q ss_pred CCc--ccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccC--CC
Q 013235 192 NAY--HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQG--VG 267 (447)
Q Consensus 192 ~~y--HG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~--~g 267 (447)
+.+ +|.+...... ....|+.....+..-. .+ .+++++.+. + ++++++++...+ ..
T Consensus 168 ~e~v~~ggs~~i~~~---------~~~~G~~~~~v~~~~~----~~----l~dle~aI~---~-~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 168 GELVEIGGSFRIPDV---------MEQSGAKLVEVGTTNR----TH----LKDYEDAIT---E-NTALLLKVHTSNYRIV 226 (454)
T ss_pred ChhhhhcchhhHHHH---------HHHcCCEEEEeCCCCC----CC----HHHHHHhcC---c-CCEEEEEEccCccccc
Confidence 664 2222111000 0112333332211000 12 566776664 2 456666665433 34
Q ss_pred ce--eeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCC-ccc-------ccccCCCCCEEEee--ccccCCcccccc
Q 013235 268 GI--IELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWG-------FEAHGVVPDIVTMA--KGIGNGIPLGAV 335 (447)
Q Consensus 268 G~--~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~-~~~-------~~~~gv~pDivt~s--K~lg~G~pigav 335 (447)
|. +.+ +++|.++|++||+++|+|-. +|-.+.. -|+ .+....-.|++++| |.++|. -.|++
T Consensus 227 G~~~~~d----l~~I~~la~~~g~~vivD~~---sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i 298 (454)
T TIGR00474 227 GFTEEVS----IAELVALGREHGLPVMEDLG---SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGII 298 (454)
T ss_pred CCCCCCC----HHHHHHHHHHcCCeEEEECC---CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEE
Confidence 53 444 99999999999999999963 3222210 011 11122346999999 999764 36888
Q ss_pred ccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHH
Q 013235 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (447)
Q Consensus 336 ~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~ 370 (447)
++++++++.+......-.+-.+-+..++..++|..
T Consensus 299 ~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~ 333 (454)
T TIGR00474 299 VGKKELIERLKKNPLTRALRVDKLTLAALEATLRL 333 (454)
T ss_pred EECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHH
Confidence 89998887765432222222333334444444443
No 321
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.12 E-value=1.1e-08 Score=104.09 Aligned_cols=284 Identities=16% Similarity=0.129 Sum_probs=151.6
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Ai 175 (447)
....|||+.+-.++. ...++....+.... ..| -++...+|.+.+++++ +.+.+++++||+.|+..+.
T Consensus 43 ~~~v~IDLlSDS~T~-------aMs~~q~a~~~vGD---d~Yagd~s~~~LE~~vAe~l--G~e~aV~v~sGTaAl~ll~ 110 (460)
T PRK13237 43 SEDVYIDLLTDSGTN-------AMSDRQWAGMMIGD---EAYAGSRNFYHLEETVQEYY--GFKHVVPTHQGRGAENLLS 110 (460)
T ss_pred cCcEEEECcccCCch-------hccHHHHHHHhhcc---hhhcCCCcHHHHHHHHHHHH--CCCeEEEeCCHHHHHHHHH
Confidence 445899999877652 22223222222211 122 2567789999999999 4678999999999999864
Q ss_pred HHHHhhcCCCeEEEEcCCcccCchhh-hhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCC
Q 013235 176 MMARLYTGCNDIISLRNAYHGNAAGT-MGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (447)
Q Consensus 176 k~ar~~t~~~~ii~~~~~yHG~~~~~-~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (447)
.+ ..++.++| .+.+|-.+..+ ....+. .+ .+....+......+++.. ++-| .+.|++.|....+.+
T Consensus 111 ~l---~v~pGd~V--p~n~~f~Tt~ahI~~~Ga-~f-vDi~~d~a~~~~~~~p~t--gnlD----~d~Le~~I~~~~~~~ 177 (460)
T PRK13237 111 RI---AIKPGQYV--PGNMYFTTTRYHQELNGG-IF-VDIIIDEAHDAQSDHPFK--GNVD----LDKLQALIDEVGAEN 177 (460)
T ss_pred Hh---CCCCcCEE--CCccchHhhHHHHHhCCc-EE-EeeecccccccccCCCCC--CCcC----HHHHHHHhccccCCc
Confidence 32 22333443 33334333322 222211 00 000000000000111111 2234 677888887543445
Q ss_pred eEEEEEc-cccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcc-------ccCCCccccc------ccCCCCCEE
Q 013235 255 VAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA-------RTGSHFWGFE------AHGVVPDIV 320 (447)
Q Consensus 255 ~aavi~E-pi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfg-------r~G~~~~~~~------~~gv~pDiv 320 (447)
++.+.++ +++..|| .+.|...+++++++|++||+.||.|-++. +| |.. .+++-. ...-.-|++
T Consensus 178 ~~lV~a~itvn~~GG-qpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~-~y~~~~i~ei~~e~~s~aD~~ 254 (460)
T PRK13237 178 IAYICLAVTVNLAGG-QPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREE-GYQDKSIKEIVHEMFSYADGC 254 (460)
T ss_pred cCceEEEEecccCCC-eeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhccccc-ccCCCcHhHHhhhccCcCcEE
Confidence 5544444 4554455 44567789999999999999999999885 44 111 111111 112246999
Q ss_pred Eee--ccccCCccc-ccccc-CHHHHHhhcCC----cccccCCCChHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHH
Q 013235 321 TMA--KGIGNGIPL-GAVVT-TPEIAEVLTRR----NYFNTFGGNPVCTAAGHA-VLKVIQKDKLQNNAHVVGSYLKERL 391 (447)
Q Consensus 321 t~s--K~lg~G~pi-gav~~-~~~i~~~l~~~----~~~~T~~~np~a~aaala-~L~~i~~~~l~~~~~~~g~~l~~~L 391 (447)
||| |.++ .++ |++++ ++++++.+... ..+.||+|-.---..|++ .|+...++++.++.-...++|.+.|
T Consensus 255 t~S~~K~~~--~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L 332 (460)
T PRK13237 255 TMSGKKDCL--VNIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKL 332 (460)
T ss_pred EEeCCCCCC--CCCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 887 5443 344 44554 46677666543 234677774221112222 3544445567766666778888877
Q ss_pred HHHHHhcCCeeeEeecceeEEEE
Q 013235 392 TALKDKYGIIGDVRGRGFLLGVE 414 (447)
Q Consensus 392 ~~l~~~~~~i~~vrg~Gl~~gie 414 (447)
.+. ..+++.. ..|.-+.|+
T Consensus 333 ~~~--Gvpv~~p--~ggH~v~vd 351 (460)
T PRK13237 333 LAA--GVPIVEP--VGGHAVFLD 351 (460)
T ss_pred HHC--CCceecC--CCceEEEEE
Confidence 765 3444443 334333344
No 322
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.10 E-value=2.4e-08 Score=110.76 Aligned_cols=268 Identities=15% Similarity=0.186 Sum_probs=165.6
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHH----HHHHHHHHHHHhhcC--CCeEEEEcCCcccCchhhhhccCCCCcccc
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGT----EANELAIMMARLYTG--CNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGs----eA~e~Aik~ar~~t~--~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~ 213 (447)
...+.++.+.|+++++ .+.|.|.++.+ +|+..+++......| ++++|+...+-||.-.......+.
T Consensus 567 ~~~~~~~r~~la~i~g--~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~------ 638 (993)
T PLN02414 567 QEMFEDLGDLLCEITG--FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGM------ 638 (993)
T ss_pred HHHHHHHHHHHHHHhC--CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCC------
Confidence 3456789999999984 58888888777 788888876643322 234677778899988766654221
Q ss_pred ccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
.+..++.. ..+ ..| +++|++.++.. .+++++|++.-..+.+|.+.+ +++|.++|+++|+++++
T Consensus 639 ----~vv~v~~d--~~G--~vD----le~L~~~i~~~-~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~v 701 (993)
T PLN02414 639 ----KIVVVGTD--AKG--NIN----IEELRKAAEAH-KDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYM 701 (993)
T ss_pred ----EEEEeccC--CCC--CcC----HHHHHHHHhcc-CCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEE
Confidence 23333331 111 123 67888888643 236888888877778888877 99999999999999999
Q ss_pred eccccCccccCCCcccccccCCCCCEEEe--ecccc-----CCccccccccCHHHHHhhcCCcc--------------cc
Q 013235 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIG-----NGIPLGAVVTTPEIAEVLTRRNY--------------FN 352 (447)
Q Consensus 294 DEv~tGfgr~G~~~~~~~~~gv~pDivt~--sK~lg-----~G~pigav~~~~~i~~~l~~~~~--------------~~ 352 (447)
|-+|. .+-.| + ..-...-.|++++ .|.++ ||--+|.+.+++++...+..... ..
T Consensus 702 DgAq~-~a~~~--l--~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iG 776 (993)
T PLN02414 702 DGANM-NAQVG--L--TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLG 776 (993)
T ss_pred EecCH-HhccC--c--CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcC
Confidence 99985 22112 1 1111233599987 48775 34558999999988776653210 12
Q ss_pred c----CCCChHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHHhcCCeeeEee-cceeEEEEEeeCCCCCCC
Q 013235 353 T----FGGNPVCTAAGHAVLKVIQKDKL---QNNAHVVGSYLKERLTALKDKYGIIGDVRG-RGFLLGVEFVTDRQLKTP 424 (447)
Q Consensus 353 T----~~~np~a~aaala~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg-~Gl~~giel~~~~~~~~p 424 (447)
| +.|+.+.+.++..-++.+-.+++ .+++..+..|++++|.+. ++... .+ .|. +.=||.-+-. ..|
T Consensus 777 t~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~~--~~~~~~-~~hEfv~~~~-~l~ 849 (993)
T PLN02414 777 TISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVLF--RGKNGT-CAHEFIIDLR-PFK 849 (993)
T ss_pred CccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCccc--cCCCCC-eeeeEEEecc-ccc
Confidence 2 22444555555666666655666 667778888999988763 33221 11 121 1112221110 001
Q ss_pred C--HHHHHHHHHHHHhCCceee
Q 013235 425 A--KAETLYIMDKMKGICALFF 444 (447)
Q Consensus 425 ~--~~~~~~~~~~l~~~Gvlv~ 444 (447)
. ...+..+.+.|++.|+...
T Consensus 850 ~~~g~~~~di~krL~d~Gihap 871 (993)
T PLN02414 850 NTAGIEPEDVAKRLMDYGFHAP 871 (993)
T ss_pred cccCCCHHHHHHHHHHcCcEEe
Confidence 0 0123668899999998764
No 323
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.10 E-value=1.3e-08 Score=101.38 Aligned_cols=273 Identities=19% Similarity=0.191 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 118 p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
.+..+++.+.++..+.++ -+...++++++++++ +.+.++.++|||.|+.+|++..- ..+++.||+..-+|-..
T Consensus 15 ~~e~~~v~~vl~sg~i~~----G~~v~~FE~~~ae~~--G~k~ava~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvAT 87 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG----GPFVRRFEQAFAEYL--GVKYAVAVSSGTAALHLALLALA-IGPGDEVIVPSFTFVAT 87 (374)
T ss_pred hHHHHHHHHHHHcCCeec----ChHHHHHHHHHHHHh--CCCeEEEecChHHHHHHHHHhcC-CCCCCEEEecCCchHHH
Confidence 456667777777654432 466788999999998 45788899999999999998544 55678898887777544
Q ss_pred chhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChH
Q 013235 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (447)
Q Consensus 198 ~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l 277 (447)
....+..+..+. .+ |.....|+-| .+.+|+.|.. ++.|||.=-..| ..+. +
T Consensus 88 an~i~~~Ga~PV-----------Fv---Did~~T~nid----~~~ie~aIt~----~tKAIipVhl~G---~~~d----m 138 (374)
T COG0399 88 ANAVLLVGAKPV-----------FV---DIDPDTLNID----PDLIEAAITP----RTKAIIPVHLAG---QPCD----M 138 (374)
T ss_pred HHHHHHcCCeEE-----------EE---ecCCcccCCC----HHHHHHHccc----CCeEEEEehhcc---CCCC----H
Confidence 433333322111 11 1111123334 5678887753 366666544444 3333 8
Q ss_pred HHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee----ccccCCccccccccC-HHHHHhhcC-Cccc
Q 013235 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTR-RNYF 351 (447)
Q Consensus 278 ~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pigav~~~-~~i~~~l~~-~~~~ 351 (447)
+.|.++|++||++||.|-+|+ +|-+ +.-...|-.-|+.+|| |.|+.| ==|+++++ +++++.+.. +.|+
T Consensus 139 ~~i~~la~~~~l~vIEDaAqa-~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG 212 (374)
T COG0399 139 DAIMALAKRHGLPVIEDAAQA-HGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHG 212 (374)
T ss_pred HHHHHHHHHcCCeEEEEcchh-ccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhC
Confidence 999999999999999999995 5421 1123445566888887 999854 33667765 556554432 1111
Q ss_pred ---------------ccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeec-c--eeEEE
Q 013235 352 ---------------NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR-G--FLLGV 413 (447)
Q Consensus 352 ---------------~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-G--l~~gi 413 (447)
.-+.-+-+.+|.+++.|+.++ ++.++-+++.+++.+.|+++.. ........+. . -+..+
T Consensus 213 ~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~--~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~~~~~i 289 (374)
T COG0399 213 LSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLD--EINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAWHLYTI 289 (374)
T ss_pred cCCCccccceeeecccccCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeeeeeeEE
Confidence 222334777788888888764 4666667777777777776631 1111111111 1 11222
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHhCCce
Q 013235 414 EFVTDRQLKTPAKAETLYIMDKMKGICAL 442 (447)
Q Consensus 414 el~~~~~~~~p~~~~~~~~~~~l~~~Gvl 442 (447)
.+... .....++.+.|.++||.
T Consensus 290 ~~~~~-------~~~R~~l~~~L~~~gi~ 311 (374)
T COG0399 290 LVDEE-------GISRDALMESLKEAGVG 311 (374)
T ss_pred EecCC-------CCCHHHHHHHHHhCCCC
Confidence 22111 11246789999999876
No 324
>PLN03032 serine decarboxylase; Provisional
Probab=99.09 E-value=2.9e-08 Score=99.91 Aligned_cols=227 Identities=17% Similarity=0.095 Sum_probs=145.1
Q ss_pred hHHHHHHHHHHHhCCCCCceE--EEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCC
Q 013235 141 HAIADFAEALASKMPGNLKVV--FFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v--~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g 218 (447)
....+..+.+++.+..+.+.+ +|++||||||..|+..+|.+..+ .+++....-|-+...+....+. +
T Consensus 66 ~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~-~~vi~s~~~H~Sv~kaa~~lg~----------~ 134 (374)
T PLN03032 66 QFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRM----------E 134 (374)
T ss_pred HHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCC-cEEEeCCCceeHHHHHHHHcCC----------C
Confidence 344567777778776555554 89999999999999999875433 4666777777666555433321 2
Q ss_pred eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC-----EEEE
Q 013235 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG-----LCIA 293 (447)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~-----llI~ 293 (447)
+..++..... .-| +++|++.|+.. .+++.+|++.-...+.|.+.| +++|.++|+++|+ ++.+
T Consensus 135 ~~~V~~d~~g----~id----~~~L~~~i~~~-~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHv 201 (374)
T PLN03032 135 AVKVPTLPSG----EID----YDDLERALAKN-RDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHC 201 (374)
T ss_pred CeEeeeCCCC----cCc----HHHHHHHHHHc-CCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEE
Confidence 3333321111 123 67788888643 235667777777778899987 9999999999974 7999
Q ss_pred eccccCccc--cC-CCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhcCCc-c----cccCCCC--hHHH
Q 013235 294 DEVQAGFAR--TG-SHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRN-Y----FNTFGGN--PVCT 361 (447)
Q Consensus 294 DEv~tGfgr--~G-~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~~-~----~~T~~~n--p~a~ 361 (447)
|-+|.|+-- .. ...+.+ ....|.++++ |-++.-.+.|+++.+++..+.+.... + -.|..|+ ....
T Consensus 202 DaA~gg~~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~ 278 (374)
T PLN03032 202 DGALFGLMMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAP 278 (374)
T ss_pred EccchhhhhhccCCCcccCC---CcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHH
Confidence 999976411 00 001111 1246888877 75554567888999887776554321 1 1345554 2445
Q ss_pred HHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHH
Q 013235 362 AAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 362 aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l 394 (447)
+..-++|+.+-.++ ..+++.++.++|.++|++.
T Consensus 279 l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 279 LYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55556677665554 4566777788888888774
No 325
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.07 E-value=3.5e-09 Score=105.30 Aligned_cols=203 Identities=19% Similarity=0.249 Sum_probs=138.0
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHHHHHHhcc-ccccc-cc---chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTVL-YL---NHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~-~~---~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~ 173 (447)
..|||..+ .|-++|+|.+|+.+.+.... ..... |. .+...+-++.++++.+.+.++|+|++++||+|..
T Consensus 44 ~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 36888653 45579999999998776642 11112 22 2235667788888888877779999999999999
Q ss_pred HHHH-HHhhcC-CC-eEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 013235 174 AIMM-ARLYTG-CN-DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (447)
Q Consensus 174 Aik~-ar~~t~-~~-~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (447)
+++- ++.+.. .+ .||.++..|-....+...+-.. ...+..+|.++.. ...++.+++.|+
T Consensus 118 vl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~--------g~~Vt~lpv~~~~--------~~d~~~~~~~i~-- 179 (428)
T KOG1549|consen 118 VLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEE--------GLEVTYLPVEDSG--------LVDISKLREAIR-- 179 (428)
T ss_pred HHHHhhccccccccceEEEecccCcchhHHHHHHHhc--------CeEEEEeccCccc--------cccHHHHHHhcC--
Confidence 9974 454432 23 5666655543333333222111 1234555544221 111566777765
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccC
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN 328 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~ 328 (447)
+ ++.+|+++-++++.|+..| +++|.++|++.|+.+++|-+|. . | +. -.+-.++.+|.++++ |.+|.
T Consensus 180 -~-~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-v---G-~i-~vDV~eln~D~~s~s~HK~ygp 247 (428)
T KOG1549|consen 180 -S-KTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-V---G-KI-PVDVQELNADFLSISAHKIYGP 247 (428)
T ss_pred -C-CceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-c---C-Cc-cccHHHcCchheeeecccccCC
Confidence 3 7889999999999999999 9999999999999999999995 4 4 22 235555678999877 87764
Q ss_pred -CccccccccCH
Q 013235 329 -GIPLGAVVTTP 339 (447)
Q Consensus 329 -G~pigav~~~~ 339 (447)
| +|++.+++
T Consensus 248 ~~--iGaLYvr~ 257 (428)
T KOG1549|consen 248 PG--IGALYVRR 257 (428)
T ss_pred Cc--ceEEEEcc
Confidence 4 88888876
No 326
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.07 E-value=1.6e-08 Score=102.40 Aligned_cols=232 Identities=19% Similarity=0.136 Sum_probs=140.0
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
++.+|...+|+++++++... +.++.++||+.|+.+++... ...++.||+....|.+........ ...
T Consensus 60 r~~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~al--l~~GD~Vl~~~~~yg~t~~~~~~~---------~~~ 126 (384)
T PRK06434 60 RWGNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSL--IKKGKRILSISDLYGQTFYFFNKV---------LKT 126 (384)
T ss_pred CCCChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHH--hCCCCEEEEecCccchHHHHHHHH---------HHh
Confidence 34577888999999998843 56789999999999999754 335678888766664433322111 011
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|+.....+- .+ .+.++ ++ ++++.+|++|.+.+..+.+.+ +++|.++|+++| +++|.+
T Consensus 127 ~Gi~v~fvd~-------~~----~~~~~--l~---~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t 184 (384)
T PRK06434 127 LGIHVDYIDT-------DR----LNSLD--FD---PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDAT 184 (384)
T ss_pred cCcEEEEECC-------CC----hhhee--ec---CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECC
Confidence 2333222111 00 01121 11 346788999988888877766 999999999998 466999
Q ss_pred ccCccccCCCcccccccCCCCCEEEee--ccccC-C-cccccccc-CHHHHHhhcCCcccccCCCChHHHHHHHHHHHHH
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN-G-IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~-G-~pigav~~-~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i 371 (447)
+. -+.. ....+.-.|++++| |-++| | .-.|++++ ++++.+.+.......-...+|+.++.++..|+.+
T Consensus 185 ~~-s~~~------~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL 257 (384)
T PRK06434 185 FA-SPYN------QNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTL 257 (384)
T ss_pred CC-Cccc------CCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcH
Confidence 63 1111 23334557999876 88875 3 44566666 4556554432111112234688888777777655
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCeee------------EeecceeEEEEEe
Q 013235 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------VRGRGFLLGVEFV 416 (447)
Q Consensus 372 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------vrg~Gl~~giel~ 416 (447)
. ..+++-.++...+.+.|+ .++.+.. .+|.|-|+.|++.
T Consensus 258 ~--~R~~r~~~~a~~~a~~L~----~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 258 G--LRMEKHNKNGMELARFLR----DSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred H--HHHHHHHHHHHHHHHHHH----cCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 3 234444455555544444 3444432 2467889999984
No 327
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.06 E-value=2.2e-10 Score=111.48 Aligned_cols=199 Identities=19% Similarity=0.180 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcc
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYH 195 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yH 195 (447)
.+|++.+|+.+ ... ++. ....++...+|.+++++.++ .+.++|+.||+.||..+++.... +...||+-+. .|
T Consensus 7 ~~~~m~~a~~~-a~~-gd~-~Yg~D~~~~~l~~~i~~l~g--~e~a~f~~sGT~An~~al~~~~~--~~~~vi~~~~-aH 78 (290)
T PF01212_consen 7 PTPAMLEAMAA-ANV-GDD-AYGEDPTTARLEERIAELFG--KEAALFVPSGTMANQLALRAHLR--PGESVICADT-AH 78 (290)
T ss_dssp S-HHEEHHHHH-TTS-B-C-CTTSSHHHHHHHHHHHHHHT--SSEEEEESSHHHHHHHHHHHHHH--TTEEEEEETT-EH
T ss_pred CCHHHHHHHHc-ccc-CCc-ccCCChhHHHHHHHHHHHcC--CCEEEEeCCCChHHHHHHHHHHh--cCCceecccc-ce
Confidence 57999999843 332 222 23357888999999999994 56778999999999999986652 4455555443 44
Q ss_pred cCc--hhhh-hccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCC--CCeEEEEEccccCCCcee
Q 013235 196 GNA--AGTM-GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS--GHVAGFLSESIQGVGGII 270 (447)
Q Consensus 196 G~~--~~~~-~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~--~~~aavi~Epi~~~gG~~ 270 (447)
-.. .++. .+ .|...++.|....+.+ + .++|++.+..... .++++|.+|-.....|-.
T Consensus 79 i~~~E~ga~~~~------------~G~~~~~l~~~~~G~l--~----~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~ 140 (290)
T PF01212_consen 79 IHFDETGAIEEL------------SGAKLIPLPSDDDGKL--T----PEDLEAAIEEHGAHHPQPAVVSLENTTELAGGT 140 (290)
T ss_dssp HHHSSTTHHHHH------------TTCEEEEEBECTGTBB-------HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB
T ss_pred eeeeccchhhHh------------cCcEEEECCCcccCCC--C----HHHHHHHhhhccccCCCccEEEEEecCcCCCCe
Confidence 322 2222 11 2444444333221222 2 6778887765322 478898888766654445
Q ss_pred eCCCChHHHHHHHHHHhCCEEEEeccccCc--cccCCCcccccccCCCCCEEEeeccccCCccccccc-cCHHHHH
Q 013235 271 ELAPGYLPAVYKSIKKAGGLCIADEVQAGF--ARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV-TTPEIAE 343 (447)
Q Consensus 271 ~~~~~~l~~l~~l~~~~g~llI~DEv~tGf--gr~G~~~~~~~~~gv~pDivt~sK~lg~G~pigav~-~~~~i~~ 343 (447)
+++.+.+++|.++|++||+.|.+|=+--.- ...| . .....----|++++|=.-++|.|.|+++ +++++++
T Consensus 141 ~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~-~--~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~ 213 (290)
T PF01212_consen 141 VYSLEELRAISELAREHGLPLHMDGARLANAAAALG-V--SLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIA 213 (290)
T ss_dssp ---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHH-H--HHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHH
T ss_pred eCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccc-c--cHHHHhhhCCEEEEEEEcccccccceEEEechHHHH
Confidence 668899999999999999999999653110 0001 0 0111123469998764444556666655 6888554
No 328
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.06 E-value=5.9e-08 Score=91.84 Aligned_cols=235 Identities=19% Similarity=0.271 Sum_probs=141.2
Q ss_pred cccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCC-CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEE
Q 013235 110 TVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP-GNLKVVFFTNSGTEANELAIMMARLYTGCNDII 188 (447)
Q Consensus 110 ~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~-~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii 188 (447)
..++||-||++.+-+.+-++.. ...+. .......+..||+.+.|.|+--... +++.|+
T Consensus 38 ~~~lgh~sPe~~qIm~~v~egi-------------------kyVFkT~n~~tf~isgsGh~g~E~al~N~le--Pgd~vL 96 (385)
T KOG2862|consen 38 RPSLGHMSPEFVQIMDEVLEGI-------------------KYVFKTANAQTFVISGSGHSGWEAALVNLLE--PGDNVL 96 (385)
T ss_pred CCccccCCHHHHHHHHHHHHHH-------------------HHHhccCCCceEEEecCCcchHHHHHHhhcC--CCCeEE
Confidence 3467888887776555443332 11121 1224567899999999999864433 677777
Q ss_pred EEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCc
Q 013235 189 SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGG 268 (447)
Q Consensus 189 ~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG 268 (447)
++..+-.|....-+.- ++. ..|+.++.+ |+... -++++++.+.++ ++.+|++--.-+.+|
T Consensus 97 v~~~G~wg~ra~D~~~------r~g---a~V~~v~~~------~G~~~--~le~i~~~lsqh---~p~~vfv~hgdsSTg 156 (385)
T KOG2862|consen 97 VVSTGTWGQRAADCAR------RYG---AEVDVVEAD------IGQAV--PLEEITEKLSQH---KPKAVFVTHGDSSTG 156 (385)
T ss_pred EEEechHHHHHHHHHH------hhC---ceeeEEecC------cccCc--cHHHHHHHHHhc---CCceEEEEecCcccc
Confidence 7755543333221111 111 134444321 22111 157777777765 455666666666777
Q ss_pred eeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhc
Q 013235 269 IIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLT 346 (447)
Q Consensus 269 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~ 346 (447)
+..+ .+...-++|++|++++++|-|-+ +| | .-|.++.||+ |+.-.+ |+|++---++-+..++...+.+.
T Consensus 157 V~q~---~~~~~g~lc~k~~~lllVD~VaS-lg--g-t~F~mDewgV--DvaytgSQKaL~aP~GLsiisfS~ka~~~~~ 227 (385)
T KOG2862|consen 157 VLQD---LLAISGELCHKHEALLLVDTVAS-LG--G-TEFEMDEWGV--DVAYTGSQKALGAPAGLSIISFSDKALEAIR 227 (385)
T ss_pred ccch---HHHHHHHHhhcCCeEEEEechhh-cC--C-ccceehhhcc--cEEEecchhhcCCCCCcceeecCHHHHHHHh
Confidence 7664 36777899999999999999987 43 3 4566788888 777544 99985222344777888777776
Q ss_pred CCc------cc-----ccCCC-----------ChHHH-HHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHH
Q 013235 347 RRN------YF-----NTFGG-----------NPVCT-AAGHAVLKVIQKDKL---QNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 347 ~~~------~~-----~T~~~-----------np~a~-aaala~L~~i~~~~l---~~~~~~~g~~l~~~L~~l 394 (447)
.+. ++ .+|.+ .|+.. ....++|+.|-++++ .++-++++++|+..|+++
T Consensus 228 ~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~ 301 (385)
T KOG2862|consen 228 DRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL 301 (385)
T ss_pred hccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 531 11 12221 24433 344577888877654 455667788888888876
No 329
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.02 E-value=1.5e-07 Score=96.63 Aligned_cols=295 Identities=14% Similarity=0.053 Sum_probs=163.1
Q ss_pred CCHHHHHHHHHHHHhc-ccc-cccccchHHHHHHHHHHHhCCCC-C-ceEEE--cCCHHHHHHHHHHHHHhhc-------
Q 013235 116 CHPYVVDSIVNQIKRI-QHS-TVLYLNHAIADFAEALASKMPGN-L-KVVFF--TNSGTEANELAIMMARLYT------- 182 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~-~~~-~~~~~~~~~~elae~L~~~~~~~-~-~~v~~--~~sGseA~e~Aik~ar~~t------- 182 (447)
.+|++.+++...++.. .+. +.........+..+.+++.++.+ . +.+.| ++||||||..||+.+|...
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5789999888887632 221 11111345566778888888654 2 34555 7999999999998876321
Q ss_pred C---CCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEE
Q 013235 183 G---CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (447)
Q Consensus 183 ~---~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi 259 (447)
+ ....|+....-|-....+....+ ..+..++... .. +.-| .++|++.|.. ++.+|+
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg----------~~v~~i~~d~-~~--~~vd----~~~L~~~i~~----~t~lV~ 191 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFD----------VELREVPMDP-GR--YVID----PEQVVEAVDE----NTIGVV 191 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcC----------ceeEEEecCC-Cc--eeeC----HHHHHHHHhh----CCeEEE
Confidence 1 12244455555544433322211 1233343211 10 0123 5778877753 456788
Q ss_pred EccccCCCceeeCCCChHHHHHHHHHHh------CCEEEEeccccCccc---cCCCcccccccCCCCCEEEee--ccccC
Q 013235 260 SESIQGVGGIIELAPGYLPAVYKSIKKA------GGLCIADEVQAGFAR---TGSHFWGFEAHGVVPDIVTMA--KGIGN 328 (447)
Q Consensus 260 ~Epi~~~gG~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tGfgr---~G~~~~~~~~~gv~pDivt~s--K~lg~ 328 (447)
+.-.+++.|.+.| +++|.++|+++ |+++.+|-+|.|+-. .++..+.+. ....|.++++ |-+.+
T Consensus 192 ~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~~ 265 (431)
T TIGR01788 192 CILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGLV 265 (431)
T ss_pred EEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccCC
Confidence 8888899999998 99999999999 999999999987431 231111222 1245888877 75434
Q ss_pred CccccccccCHH--HHHhhcCC-------cccccCCCC-hH-HHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHH
Q 013235 329 GIPLGAVVTTPE--IAEVLTRR-------NYFNTFGGN-PV-CTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 329 G~pigav~~~~~--i~~~l~~~-------~~~~T~~~n-p~-a~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l 394 (447)
...+|+++.+++ +.+.+... ....|..+. +. ..+..-.+|..+-.++ +.++..++.++|.++|+++
T Consensus 266 P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~ 345 (431)
T TIGR01788 266 YPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL 345 (431)
T ss_pred CCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456788777654 32332210 000122222 21 2222233444443333 4566677778888777665
Q ss_pred HHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCcee
Q 013235 395 KDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 395 ~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
..+.++...+ .-.++.+.+..+.. ......++.+.|.++|+.+
T Consensus 346 -~~~el~~~~~-~~~iV~Fr~~~~~~----~~~~~~~l~~~L~~~G~~~ 388 (431)
T TIGR01788 346 -GPFEIISDGS-GIPLVAFKLKDDAD----PGYTLYDLSHRLRERGWIV 388 (431)
T ss_pred -CCEEEeeCCC-CceEEEEEeCCCCC----CCcCHHHHHHHHHHCCCcc
Confidence 1122222111 23344455432110 0112456888999999854
No 330
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.99 E-value=1.8e-08 Score=103.75 Aligned_cols=162 Identities=20% Similarity=0.225 Sum_probs=104.4
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
++.++...+++++|++..+. +..++++||+.|+.+++... ...+++||+....|.+........ ...
T Consensus 65 r~~~pt~~~le~~la~l~g~--~~~v~fsSG~~Ai~~al~~l--l~~Gd~VI~~~~~y~~t~~~~~~~---------l~~ 131 (437)
T PRK05613 65 RLTNPTVEALENRIASLEGG--VHAVAFASGQAAETAAILNL--AGAGDHIVTSPRLYGGTETLFLVT---------LNR 131 (437)
T ss_pred CccChHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHh--cCCCCEEEECCCccHHHHHHHHHH---------HHh
Confidence 44578888999999998854 56778899999999888643 235677888777776542211110 011
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|+.....+++ .| .+++++.+. + ++.+|++|...+..|.+.+ +++|.++|+++|+++|+|.+
T Consensus 132 ~Gi~v~~vd~~------~d----~e~l~~~l~---~-~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t 193 (437)
T PRK05613 132 LGIEVTFVENP------DD----PESWQAAVQ---P-NTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNT 193 (437)
T ss_pred cCeEEEEECCC------CC----HHHHHHhCC---c-cCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECC
Confidence 23333322211 12 456776664 2 4667888887777777777 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCCEEEee--ccccC-Cccccccc
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN-GIPLGAVV 336 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~-G~pigav~ 336 (447)
+. .|. ....-.+| .|++++| |-++| |--+|.++
T Consensus 194 ~a-~g~----~~~p~~~G--aDivv~S~~K~l~G~gd~~gG~v 229 (437)
T PRK05613 194 IA-TAA----LVRPLELG--ADVVVASLTKFYTGNGSGLGGVL 229 (437)
T ss_pred Cc-ccc----ccChHHhC--CCEEEeeccceecCCCcceeEEE
Confidence 85 221 11111234 4998765 98876 44344433
No 331
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.99 E-value=1.6e-08 Score=98.05 Aligned_cols=192 Identities=19% Similarity=0.188 Sum_probs=128.7
Q ss_pred cCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEc
Q 013235 112 CCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLR 191 (447)
Q Consensus 112 ~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~ 191 (447)
++.+.+++=..++- +++..++.-.+..+|....|+++++.+-.+ .. .+.+.||..|+..||..... .++.||+-.
T Consensus 34 sy~F~d~~haa~lF-~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG-~a-a~a~aSG~AA~~~ai~~la~--aGD~iVss~ 108 (426)
T COG2873 34 SYVFDDTDHAAALF-GLKEPGNIYTRIMNPTTDVLEERIAALEGG-VA-ALAVASGQAAITYAILNLAG--AGDNIVSSS 108 (426)
T ss_pred eeecCCHHHHHHHh-CCCcCCceeeeccCchHHHHHHHHHHhhcc-hh-hhhhccchHHHHHHHHHhcc--CCCeeEeec
Confidence 34455554333322 345545555567789999999999987643 33 45789999999999864322 467888776
Q ss_pred CCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceee
Q 013235 192 NAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIE 271 (447)
Q Consensus 192 ~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~ 271 (447)
.-| |.+....+.+ ++..|+....... .| .+.+++.|+. ++.+|++|.+-++++.++
T Consensus 109 ~LY-GGT~~lf~~t--------l~~~Gi~v~fvd~-------~d----~~~~~~aI~~----nTkavf~EtigNP~~~v~ 164 (426)
T COG2873 109 KLY-GGTYNLFSHT--------LKRLGIEVRFVDP-------DD----PENFEAAIDE----NTKAVFAETIGNPGLDVL 164 (426)
T ss_pred ccc-CchHHHHHHH--------HHhcCcEEEEeCC-------CC----HHHHHHHhCc----ccceEEEEeccCCCcccc
Confidence 666 4444443332 1223443221100 22 5678877763 778999999999999998
Q ss_pred CCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccC-CccccccccCHHHHH
Q 013235 272 LAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPLGAVVTTPEIAE 343 (447)
Q Consensus 272 ~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pigav~~~~~i~~ 343 (447)
. ++.|.++|++||+++|+|...+. .|-++..+--.|||+ ++|-+|| |--||.++....-.|
T Consensus 165 D----ie~ia~iAh~~gvpliVDNT~at-------pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FD 228 (426)
T COG2873 165 D----IEAIAEIAHRHGVPLIVDNTFAT-------PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFD 228 (426)
T ss_pred C----HHHHHHHHHHcCCcEEEecCCCc-------ceecchhhcCCCEEEEeecccccCCccccceEEEeCCccc
Confidence 7 99999999999999999998752 233444445569985 7799997 788888876443333
No 332
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.91 E-value=5.8e-07 Score=98.42 Aligned_cols=262 Identities=13% Similarity=0.169 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHhCCCCCceEEEc-CCHHHHHHHHHHHHHhh------cCCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 142 AIADFAEALASKMPGNLKVVFFT-NSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 142 ~~~elae~L~~~~~~~~~~v~~~-~sGseA~e~Aik~ar~~------t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
.+.||.+.|++++ +++.+-+. +||+.+..++++..|.| ++|++ +....+-||.........
T Consensus 544 ~i~elq~~l~eLt--Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~-vLIp~saHgtNpasa~~~--------- 611 (954)
T PRK12566 544 MIDELEAWLCAIT--GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDI-CLIPSSAHGTNPASAQMA--------- 611 (954)
T ss_pred HHHHHHHHHHHHH--CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCE-EEecccccccCHHHHHHC---------
Confidence 4567888888888 45655444 59999988888888875 34444 445557777766543322
Q ss_pred cCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
|+..+..|....+. .| +++|++.+++.. +++++|++.-....|+...+ +++|.++|+++|+++++|
T Consensus 612 ---GieVv~Vp~D~~G~--iD----le~L~a~I~~~~-~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vD 677 (954)
T PRK12566 612 ---GMRVVIVECDPDGN--VD----LDDLKAKAAAAG-DRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMD 677 (954)
T ss_pred ---CCEEEEeccCCCCC--cC----HHHHHHHhhccC-CCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEE
Confidence 33333332211221 23 678888886443 47777777654444444333 999999999999999999
Q ss_pred ccccCccccCCCcccccc-cCCCCCEEEee--cccc----CCc-cccccccCHHHHHhhcCCc-------------cccc
Q 013235 295 EVQAGFARTGSHFWGFEA-HGVVPDIVTMA--KGIG----NGI-PLGAVVTTPEIAEVLTRRN-------------YFNT 353 (447)
Q Consensus 295 Ev~tGfgr~G~~~~~~~~-~gv~pDivt~s--K~lg----~G~-pigav~~~~~i~~~l~~~~-------------~~~T 353 (447)
-++. .+-.+ ... -.+-.|+++++ |.++ +|. -+|.+..++++...+.+.. ..+.
T Consensus 678 gA~~-~a~~~-----l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~ 751 (954)
T PRK12566 678 GANL-NAQVG-----LARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAA 751 (954)
T ss_pred eeCh-hhccC-----CCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeec
Confidence 9985 22111 121 12345999876 9775 344 4777777776665554211 1123
Q ss_pred CCCChHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHHHhcCCeeeEee-cce-e--EEEEEeeCCCCCCCCH
Q 013235 354 FGGNPVCTAAGHAVLKVIQKDKLQN---NAHVVGSYLKERLTALKDKYGIIGDVRG-RGF-L--LGVEFVTDRQLKTPAK 426 (447)
Q Consensus 354 ~~~np~a~aaala~L~~i~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~i~~vrg-~Gl-~--~giel~~~~~~~~p~~ 426 (447)
..++.+...++..-++.+-.+ +.+ ....+..|+.++|.+ .++... .+ .|. + ..+.+..-+. ...
T Consensus 752 ~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~---~~~v~~--~~~~~~~~hEfii~~~~l~~---~~g 822 (954)
T PRK12566 752 PWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGG---AFPVLY--RGRNERVAHECILDLRPLKA---QTG 822 (954)
T ss_pred ccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHh---hCCCCc--CCCCCCeeeEEEEEcccccc---ccC
Confidence 334444444444555544333 322 224567788888866 344333 22 121 1 1222211110 001
Q ss_pred HHHHHHHHHHHhCCceee
Q 013235 427 AETLYIMDKMKGICALFF 444 (447)
Q Consensus 427 ~~~~~~~~~l~~~Gvlv~ 444 (447)
..+..+.+.|++.||...
T Consensus 823 ~~~~dvakRL~d~Gihap 840 (954)
T PRK12566 823 ISEEDVAKRLMDYGFHAP 840 (954)
T ss_pred CCHHHHHHHHHHCCcEEe
Confidence 123568889999998764
No 333
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.88 E-value=3.5e-07 Score=85.13 Aligned_cols=224 Identities=18% Similarity=0.206 Sum_probs=151.3
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~ 219 (447)
.|++.++-+.|++++ +.+.+.++++.-||-.++|... .++.+.++.++.-|-.+.-+.-..+. .+
T Consensus 60 kPpI~~F~~dlaeFl--g~D~~R~t~GARe~KfavMhal---~~~gd~vV~D~~aHYttyvAAEragl----------~v 124 (382)
T COG1103 60 KPPIKDFLEDLAEFL--GMDEVRVTAGAREAKFAVMHAL---CKEGDWVVVDSLAHYTTYVAAERAGL----------NV 124 (382)
T ss_pred CCcHHHHHHHHHHHh--CCceeeecccchhhHHHHHHHh---ccCCCEEEEcCcchHHHHHHHHhcCC----------eE
Confidence 467788888899998 5788999999999998888632 35678888999999777655433222 12
Q ss_pred EeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC
Q 013235 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG 299 (447)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG 299 (447)
..+| +.--..|..+.+.|.+.+++..++. .+.++..++.-+-|+-|.++. .+++.++|+++|+++++.=+||
T Consensus 125 ~eVp--~tg~Pey~i~~e~y~~viee~~~~~-g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt- 196 (382)
T COG1103 125 AEVP--NTGYPEYKITPEGYAEVIEEVKDEG-GDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT- 196 (382)
T ss_pred EecC--CCCCCceEecHHHHHHHHHHHHhcc-CCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee-
Confidence 2222 1111112246777788888877754 235777777778888888876 8899999999999999999998
Q ss_pred ccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhcCCc-----------ccccCCCChHHHHHHH-
Q 013235 300 FARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRN-----------YFNTFGGNPVCTAAGH- 365 (447)
Q Consensus 300 fgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~~-----------~~~T~~~np~a~aaal- 365 (447)
.||.- .....+.+|.++-| |+++..-|+|...+++|+.+..-..+ .+-|--|-|+....|.
T Consensus 197 ~Grmp-----vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASf 271 (382)
T COG1103 197 VGRMP-----VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASF 271 (382)
T ss_pred ecccc-----ccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcC
Confidence 66643 23445778999866 99998779999999999988654321 2234445555544332
Q ss_pred -HHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 013235 366 -AVLKVIQKDKLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 366 -a~L~~i~~~~l~~~~~~~g~~l~~~L~~l 394 (447)
.+.+.++ ++-+.+ +..++|.+.|+++
T Consensus 272 P~V~eRVk--rWdeEv-~kaR~fv~elEki 298 (382)
T COG1103 272 PHVVERVK--RWDEEV-EKARWFVAELEKI 298 (382)
T ss_pred HHHHHHHH--HHHHHH-HHHHHHHHHHHHh
Confidence 2222221 222222 3456677777665
No 334
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.88 E-value=6.7e-07 Score=98.38 Aligned_cols=268 Identities=16% Similarity=0.196 Sum_probs=159.9
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc-----CCCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t-----~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
....||.+.|+++++-+ ..-++.++|+.+.-+++..+|.|. +++.++....+-||.-..+....+.
T Consensus 530 q~i~elq~~l~eltGmd-~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~-------- 600 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFD-AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGM-------- 600 (939)
T ss_pred HHHHHHHHHHHHHHCCC-CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCC--------
Confidence 34568888899888433 345677889988888888888752 2345666778889888776544321
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
.+..++.. ..+ ..| +++|++.++..+ +++++|++.-.... |.+.++ +++|.++|+++|+++++|-
T Consensus 601 --~Vv~V~~d--~~G--~iD----le~L~~~i~~~~-~~taaV~iT~pst~-G~~e~~---I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 601 --QVVPVNCD--QDG--NID----LVDLKNKAEQHG-DELAAVMVTYPSTH-GVFEPT---IQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred --EEEEeccC--CCC--CcC----HHHHHHHHhhcC-CceEEEEEEeCCcC-ceeccc---HHHHHHHHHHcCCEEEEEe
Confidence 22333321 111 124 678888887532 36777776543333 555422 8999999999999999999
Q ss_pred cccC-ccccCCCcccccc-cCCCCCEEEee--cccc-----CCccccccccCHHHHHhhcCCcc----------------
Q 013235 296 VQAG-FARTGSHFWGFEA-HGVVPDIVTMA--KGIG-----NGIPLGAVVTTPEIAEVLTRRNY---------------- 350 (447)
Q Consensus 296 v~tG-fgr~G~~~~~~~~-~gv~pDivt~s--K~lg-----~G~pigav~~~~~i~~~l~~~~~---------------- 350 (447)
+|.. .+ + ... -..-.|+++++ |.++ ||--+|.+.+++++...+..+..
T Consensus 666 Aq~~al~--~-----l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~ 738 (939)
T TIGR00461 666 ANMNAQV--G-----LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSV 738 (939)
T ss_pred cChhhCC--C-----CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccc
Confidence 9853 21 1 111 12345999885 9887 55568888888877665543211
Q ss_pred cccCCCChHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEee-CCCCCCCCH
Q 013235 351 FNTFGGNPVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVT-DRQLKTPAK 426 (447)
Q Consensus 351 ~~T~~~np~a~aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~-~~~~~~p~~ 426 (447)
.+.+.++.+.+..+...|..+=.+++. +..-.+.+|+.++|.+ .++++. .|..-.+.=||+- -+..+.-..
T Consensus 739 s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~---~~~~l~--~~~~~~~~hEfv~~~~~~~~~~g 813 (939)
T TIGR00461 739 SAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD---HYPILF--VGTLKHVAHECILDLRPLKAKTG 813 (939)
T ss_pred cccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc---cCcccc--cCCCCceeEEEEEeccchhhhcC
Confidence 122445555555555666666555553 4455677888888876 233322 2211122234431 111000001
Q ss_pred HHHHHHHHHHHhCCceee
Q 013235 427 AETLYIMDKMKGICALFF 444 (447)
Q Consensus 427 ~~~~~~~~~l~~~Gvlv~ 444 (447)
..+..+.++|++.|+...
T Consensus 814 ~~~~dIakrL~d~G~hap 831 (939)
T TIGR00461 814 IEAIDVAKRLQDYGFHAP 831 (939)
T ss_pred CCHHHHHHHHHhCCeecc
Confidence 235779999999998753
No 335
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.87 E-value=3.1e-07 Score=92.65 Aligned_cols=286 Identities=15% Similarity=0.106 Sum_probs=153.4
Q ss_pred CCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
...|||+.+-.++. -..++..+|+.. .. ..| -++...+|.+..++++ +.+.++++.+|..|+..+.+
T Consensus 40 ~dV~IDLrSDTgT~---apS~~m~aAM~~----GD---D~Y~gdpSv~~Lee~vael~--G~E~alpthqGRgaE~Il~~ 107 (467)
T TIGR02617 40 EDVFIDLLTDSGTG---AVTQSMQAAMMR----GD---EAYSGSRSYYALAESVKNIF--GYQYTIPTHQGRGAEQIYIP 107 (467)
T ss_pred CCeEEECccCCCCC---CCCHHHHHHHHc----CC---cccccCchHHHHHHHHHHHh--CCceEEECCCCchHHHHHHH
Confidence 34689999876652 123566666653 21 123 3677889999999999 56788999999999988887
Q ss_pred HHHhhcCCCeEE------EEcCCcccCch-hhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 013235 177 MARLYTGCNDII------SLRNAYHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (447)
Q Consensus 177 ~ar~~t~~~~ii------~~~~~yHG~~~-~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (447)
..-. ..++.++ ++...||-.+. +...+++..... .........+.+.++++.+ | +++|++.|..
T Consensus 108 ~~~~-~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~--l~~~ea~~~~~~~~fkG~~--d----l~~le~~I~~ 178 (467)
T TIGR02617 108 VLIK-KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARN--VYTKEAFDTGVRYDFKGNF--D----LEGLERGIEE 178 (467)
T ss_pred hhcc-cccccccccccccccceEEEEecchHHHHHcCceeec--ccchhhcccccCCCCCCCc--C----HHHHHHHHhh
Confidence 4332 1112222 12234443432 223332211000 0000000001112222222 3 6788888876
Q ss_pred cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC----c------cccCCCcccc-cccCCCCC
Q 013235 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG----F------ARTGSHFWGF-EAHGVVPD 318 (447)
Q Consensus 250 ~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG----f------gr~G~~~~~~-~~~gv~pD 318 (447)
.+++++..+.++-..+..|-.+.|.+.+++++++|++||+.+++|-+--- | +.+|....-+ ...--.-|
T Consensus 179 ~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD 258 (467)
T TIGR02617 179 VGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD 258 (467)
T ss_pred cCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC
Confidence 55566777766665555555666899999999999999999999965310 1 1222111000 00012357
Q ss_pred EEE--eeccccCCccccccc-cCHH-HHHhhcC-------CcccccCCCChHHHHHHHH-HHHHHhhhhHHHHHHHHHHH
Q 013235 319 IVT--MAKGIGNGIPLGAVV-TTPE-IAEVLTR-------RNYFNTFGGNPVCTAAGHA-VLKVIQKDKLQNNAHVVGSY 386 (447)
Q Consensus 319 ivt--~sK~lg~G~pigav~-~~~~-i~~~l~~-------~~~~~T~~~np~a~aaala-~L~~i~~~~l~~~~~~~g~~ 386 (447)
.++ ++|++ |.|+|.++ ++++ +.+.+.. ...+.||+|=.---..|++ -|+..-+++++++--...+|
T Consensus 259 svt~slsKgl--gApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~y 336 (467)
T TIGR02617 259 MLAMSAKKDA--MVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQY 336 (467)
T ss_pred EEEEEcCCCC--CCcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHH
Confidence 775 55766 45776655 4443 2222222 1256788874322222232 35544455666555555677
Q ss_pred HHHHHHHHHHhcCCeeeEeecce
Q 013235 387 LKERLTALKDKYGIIGDVRGRGF 409 (447)
Q Consensus 387 l~~~L~~l~~~~~~i~~vrg~Gl 409 (447)
|.++|.+. .-|++. +-|.+.
T Consensus 337 l~~~L~~~--Gvpi~~-~Gghav 356 (467)
T TIGR02617 337 LVNGLEEI--GVVCQQ-AGGHAA 356 (467)
T ss_pred HHHHHHhC--CCcEEe-cCccEE
Confidence 77777664 334444 444333
No 336
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.85 E-value=4.2e-07 Score=92.23 Aligned_cols=279 Identities=15% Similarity=0.037 Sum_probs=150.6
Q ss_pred CCHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCC-CceEEEc-CCHHHHHHHHHHHHHhhcCCCeEEEEcC
Q 013235 116 CHPY-VVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN-LKVVFFT-NSGTEANELAIMMARLYTGCNDIISLRN 192 (447)
Q Consensus 116 ~~p~-v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~-~~~v~~~-~sGseA~e~Aik~ar~~t~~~~ii~~~~ 192 (447)
.+|. |.+|+.+.+-...|.... ......+..++|++++..+ .++|+|+ .|||++++.++.-. ..+++.+++. .
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~~-f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l--~~~~~~~vi~-~ 98 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQKP-VKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL--LGARRVDHLA-W 98 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCHH-HHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc--CCCCcceEEE-e
Confidence 3577 888887654322243222 2456677888888888643 3356666 49999999999654 2222333333 4
Q ss_pred CcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeC
Q 013235 193 AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (447)
Q Consensus 193 ~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~ 272 (447)
+.||......... .+.. ..+..+..+ +... .| ++++ +. ...|.+-.+...+|.+.|
T Consensus 99 g~f~~~~~~~~~~---~~g~----~~v~~~~~~--~g~~--~d----~~~i----~~-----~~~V~~~h~~t~tG~~~p 154 (378)
T PRK03080 99 ESFGSKWATDVVK---QLKL----EDPRVLEAD--YGSL--PD----LSAV----DF-----DRDVVFTWNGTTTGVRVP 154 (378)
T ss_pred CHHHHHHHHHHHh---hcCC----CCceEeccC--CCCC--CC----Hhhc----CC-----CCCEEEEecCCccceecc
Confidence 5666643221100 0000 012222221 1000 11 2222 21 122455556667788887
Q ss_pred CCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhcCCc-
Q 013235 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRN- 349 (447)
Q Consensus 273 ~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~~- 349 (447)
+++|.+ +++|+++|+|=+|+ +|-. -+-++ + .|++++| |.|++-.-+|.+..+++..+.+....
T Consensus 155 ----i~~I~~--~~~g~~~vVDa~qs-~G~~---pidv~--~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~ 220 (378)
T PRK03080 155 ----VARWIG--ADREGLTICDATSA-AFAL---PLDWS--K--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTP 220 (378)
T ss_pred ----chhhcc--ccCCCeEEEecccc-cccC---CCCHH--H--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccC
Confidence 888888 78999999999996 4421 12222 2 4999877 98876444688999998887654310
Q ss_pred -----------c----------cccCCCChH-HHHHHHHHHHHHhhh-h---HHHHHHHHHHHHHHHHHHHHHhcCCee-
Q 013235 350 -----------Y----------FNTFGGNPV-CTAAGHAVLKVIQKD-K---LQNNAHVVGSYLKERLTALKDKYGIIG- 402 (447)
Q Consensus 350 -----------~----------~~T~~~np~-a~aaala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~i~- 402 (447)
. ..|++..++ +..+..++|+.+.+. + ..++.+++.++++++|+++.. .....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~-~~~~~~ 299 (378)
T PRK03080 221 ARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPW-ATPLVA 299 (378)
T ss_pred CCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC-cccccC
Confidence 0 113333333 334446788888764 3 345666666777776665420 11111
Q ss_pred --eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 403 --DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 403 --~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
..|+ +.++.+.+.+ +++....++...++++|++++
T Consensus 300 ~~~~~s-~~i~~~~~~~------~~~~~~~~~~~~l~~~~i~v~ 336 (378)
T PRK03080 300 DPATRS-NTSVTLDFVD------AQAAVDAAAVAKLLRENGAVD 336 (378)
T ss_pred CccccC-ccEEEEEcCC------chHHHHHHHHHHHHHcCCeec
Confidence 1122 2355555421 000112346677778888775
No 337
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.85 E-value=4.7e-07 Score=90.92 Aligned_cols=234 Identities=20% Similarity=0.145 Sum_probs=142.9
Q ss_pred cccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccC
Q 013235 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (447)
Q Consensus 137 ~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~ 216 (447)
+..+|....|+++++++-+ .+..+.++||..|+..++..... .++.|+..+..|.|....+..+-. .
T Consensus 59 R~~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~--~GD~vl~~~~~YG~t~~~~~~~l~---------~ 125 (396)
T COG0626 59 RTGNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLK--AGDHVLLPDDLYGGTYRLFEKILQ---------K 125 (396)
T ss_pred cCCCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcC--CCCEEEecCCccchHHHHHHHHHH---------h
Confidence 4458888999999998874 45678899999999998764332 468899988888665544432211 1
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|+....+.. .+ .+.+++.+. +.++.+|++|+.-++.--+.. +++|.++++++|+++|+|.+
T Consensus 126 ~gi~~~~~d~-------~~----~~~~~~~~~---~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNT 187 (396)
T COG0626 126 FGVEVTFVDP-------GD----DEALEAAIK---EPNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNT 187 (396)
T ss_pred cCeEEEEECC-------CC----hHHHHHHhc---ccCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECC
Confidence 3444432211 11 223333333 237889999987777666665 99999999999999999998
Q ss_pred ccCccccCCCcccccccCCCCCEEE--eeccccCC--ccccccccCH-HHHHhhcCCcccccCC--CChHHHHHHHHHHH
Q 013235 297 QAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNG--IPLGAVVTTP-EIAEVLTRRNYFNTFG--GNPVCTAAGHAVLK 369 (447)
Q Consensus 297 ~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G--~pigav~~~~-~i~~~l~~~~~~~T~~--~np~a~aaala~L~ 369 (447)
... + . -++-+..-.|||+ ..|-++|. .-.|+|+++. ++.+.+... ...+++ ..|..+-..+..|+
T Consensus 188 fat----P--~-~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~-~~~~~G~~l~p~dA~l~lRGlk 259 (396)
T COG0626 188 FAT----P--V-LQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA-QRANTGAVLSPFDAWLLLRGLR 259 (396)
T ss_pred ccc----c--c-ccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH-HHhhcCCCCCHHHHHHHHhccc
Confidence 753 2 1 1233333369986 66999974 5667677555 444444111 111122 24666655555444
Q ss_pred HHh--hhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeE--e----------------ecceeEEEEEee
Q 013235 370 VIQ--KDKLQNNAHVVGSYLKERLTALKDKYGIIGDV--R----------------GRGFLLGVEFVT 417 (447)
Q Consensus 370 ~i~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v--r----------------g~Gl~~giel~~ 417 (447)
.+. -+...+++.++.++|. +++.+..| + |.|-|+.++|..
T Consensus 260 TL~~Rm~~~~~nA~~IA~~L~--------~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 260 TLALRMERHNENALKIAEFLA--------DHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHh--------cCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 432 1223344444444432 24444433 2 588999999954
No 338
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.84 E-value=8.6e-08 Score=95.28 Aligned_cols=214 Identities=18% Similarity=0.108 Sum_probs=137.4
Q ss_pred ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCC
Q 013235 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (447)
Q Consensus 138 ~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~ 217 (447)
..+|....+...+++... .+.++.++||..|+..|+.... ....+||++...|.|.......... ..
T Consensus 74 ~~nPt~~~le~~iaal~g--a~~~l~fsSGmaA~~~al~~L~--~~g~~iV~~~~~Y~gT~~~l~~~~~---------~~ 140 (409)
T KOG0053|consen 74 SGNPTRDVLESGIAALEG--AAHALLFSSGMAAITVALLHLL--PAGDHIVATGDVYGGTLRILRKFLP---------KF 140 (409)
T ss_pred CCCCchHHHHHHHHHHhC--CceEEEecccHHHHHHHHHHhc--CCCCcEEEeCCCcccHHHHHHHHHH---------Hh
Confidence 346666778888888763 4568899999999999998655 3678899999999765543322110 12
Q ss_pred CeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc
Q 013235 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (447)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 297 (447)
|+..-. .|... .+++++.++ + ++-+|++|..-++...++. +++|.++|+++|+++|+|+..
T Consensus 141 gie~~~----------vd~~~-~~~~~~~i~---~-~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf 201 (409)
T KOG0053|consen 141 GGEGDF----------VDVDD-LKKILKAIK---E-NTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTF 201 (409)
T ss_pred Cceeee----------echhh-HHHHHHhhc---c-CceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCc
Confidence 222211 11110 344555544 2 7889999998888777776 999999999999999999987
Q ss_pred cCccccCCCcccccccCCCCCEEE--eeccccCC--ccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHHH-
Q 013235 298 AGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNG--IPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI- 371 (447)
Q Consensus 298 tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G--~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i- 371 (447)
.+.. -.+-+..-.|||+ ..|-|+|. +-.|.++.+ +++...+......--+.-||+.|...+.-|+.+
T Consensus 202 ~~p~-------~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl~ 274 (409)
T KOG0053|consen 202 GSPY-------NQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKTLH 274 (409)
T ss_pred Cccc-------ccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcchhh
Confidence 6432 1233334479996 66999974 566777775 777766654332234556788877766555432
Q ss_pred -hhhhHHHHHHHHHHHHHHH
Q 013235 372 -QKDKLQNNAHVVGSYLKER 390 (447)
Q Consensus 372 -~~~~l~~~~~~~g~~l~~~ 390 (447)
+-+.-.+++..+.++|.+.
T Consensus 275 lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 275 LRINKHSENALKIALLLEAH 294 (409)
T ss_pred hhHHHHHHHHHHHHHHhhhC
Confidence 1122334444455554443
No 339
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.84 E-value=1.6e-06 Score=96.25 Aligned_cols=319 Identities=13% Similarity=0.082 Sum_probs=171.5
Q ss_pred CeEEEecCCcccccCCCCCHHHHHHHH-HHHHhc---cccc---ccccchHHHHHHHHHHHhCCCCCc--eEEEcCCHHH
Q 013235 99 RRYLDAFGGIATVCCGHCHPYVVDSIV-NQIKRI---QHST---VLYLNHAIADFAEALASKMPGNLK--VVFFTNSGTE 169 (447)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~-~~l~~~---~~~~---~~~~~~~~~elae~L~~~~~~~~~--~v~~~~sGse 169 (447)
..|||..+.-. ..|.+++++. +.+... .|.. .......+.+.+++++++++.+.+ .|+|+++.|+
T Consensus 35 ~iYLD~Aatt~------~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATL------YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCC------CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 58999764322 2344544443 443332 1211 111244567888999999876443 5899999999
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCC--ChHHHHHHHHHHH
Q 013235 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGA--DGEMYAKDVQDLI 247 (447)
Q Consensus 170 A~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~--d~~~~~~~le~~i 247 (447)
|+..+..... ...++.||+ ...-|........+.... ...+..++.+.....+.+. +.+...++|++.+
T Consensus 109 alnlva~~l~-~~~gd~Iv~-t~~eH~svl~~~~~a~~~-------G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~ 179 (805)
T PLN02724 109 ALKLVGETFP-WSSESHFCY-TLENHNSVLGIREYALEK-------GAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRN 179 (805)
T ss_pred HHHHHHHHCC-CCCCCeEEE-eeccccchHHHHHHHHHc-------CCeEEeccchhccccccccccccccchhhhhhhh
Confidence 9998876432 334556665 455554443322111000 0112233221100000000 0000013344432
Q ss_pred ----Hcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHh--------CCEEEEeccccCccccCCCccccccc
Q 013235 248 ----DFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA--------GGLCIADEVQAGFARTGSHFWGFEAH 313 (447)
Q Consensus 248 ----~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~--------g~llI~DEv~tGfgr~G~~~~~~~~~ 313 (447)
... ..+++..|.+.-+.+..|.+.| ++.+..+++.. ++++++|-+|+ +|.. -++..
T Consensus 180 ~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~~-----piDv~ 249 (805)
T PLN02724 180 TSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGTS-----PPDLS 249 (805)
T ss_pred hhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cCCC-----CCChh
Confidence 111 1234567888888899999998 77665544432 36899999996 4321 13333
Q ss_pred CCCCCEEEee--ccccCCccccccccCHHHHHhhcCCccc-cc---------C--------------CCChHHHHHHHHH
Q 013235 314 GVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNYF-NT---------F--------------GGNPVCTAAGHAV 367 (447)
Q Consensus 314 gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~~~~-~T---------~--------------~~np~a~aaala~ 367 (447)
.+.+|.+++| |-+|+-.-+|+++.+++..+.+.+...+ .| | .-|..+.++..++
T Consensus 250 ~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aa 329 (805)
T PLN02724 250 RYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHG 329 (805)
T ss_pred hcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHH
Confidence 4568999987 8665323478899999887766542111 01 1 1345566666677
Q ss_pred HHHHhh---hhHHHHHHHHHHHHHHHHHHHHHhc--CCe---ee------EeecceeEEEEEeeCCCCCCCCHHHHHHHH
Q 013235 368 LKVIQK---DKLQNNAHVVGSYLKERLTALKDKY--GII---GD------VRGRGFLLGVEFVTDRQLKTPAKAETLYIM 433 (447)
Q Consensus 368 L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~--~~i---~~------vrg~Gl~~giel~~~~~~~~p~~~~~~~~~ 433 (447)
|+.+++ +...++.+.+.++|.++|.++.... +.+ +. ...++-++.+.+........+ ...+.
T Consensus 330 l~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~----~~~v~ 405 (805)
T PLN02724 330 FKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVG----HREVE 405 (805)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeC----HHHHH
Confidence 777765 4567888889999999888873111 111 11 112556777777543221111 12233
Q ss_pred HHHHhCCceeecc
Q 013235 434 DKMKGICALFFSQ 446 (447)
Q Consensus 434 ~~l~~~Gvlv~~~ 446 (447)
..+-++||.++.+
T Consensus 406 ~l~~~~gI~vR~G 418 (805)
T PLN02724 406 KLASLSGIQLRTG 418 (805)
T ss_pred HHHHhcCcEEeec
Confidence 3334579988764
No 340
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.84 E-value=6.7e-07 Score=99.74 Aligned_cols=268 Identities=14% Similarity=0.193 Sum_probs=145.2
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc---C--CCeEEEEcCCcccCchhhhhccCCCCcccccc
Q 013235 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---G--CNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t---~--~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~ 215 (447)
....++.+.|+++++-+ ...+..|+|++++.+++..+|.|. | +++++....+-||....+....+.
T Consensus 542 ~~i~e~q~~l~eltG~d-~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~-------- 612 (954)
T PRK05367 542 ELIDQLEAWLAEITGYD-AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM-------- 612 (954)
T ss_pred HHHHHHHHHHHHHHCCC-CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC--------
Confidence 34567888888887432 334446688888888887777652 1 234555667778777665443221
Q ss_pred CCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
.+..++.. ..+ ..| .++|++.++.. ++++++|++.-....|+...+ +++|.++|+++|+++++|.
T Consensus 613 --~vv~v~~d--~~G--~iD----~~~L~~~i~~~-~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDg 677 (954)
T PRK05367 613 --KVVVVACD--ENG--NID----LDDLRAKAEEH-ADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDG 677 (954)
T ss_pred --EEEEECCC--CCC--CcC----HHHHHHHHhcc-CCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEEC
Confidence 22333321 111 123 67787777643 235666655432222333344 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCCCEEEee--cccc----C-CccccccccCHHHHHhhcCCccc--------ccCCCChHH
Q 013235 296 VQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG----N-GIPLGAVVTTPEIAEVLTRRNYF--------NTFGGNPVC 360 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg----~-G~pigav~~~~~i~~~l~~~~~~--------~T~~~np~a 360 (447)
++.+ +-.+ +-.... .-.|+++++ |.++ + |--+|.+.+++.+...+...... ++....+.+
T Consensus 678 A~~~-al~~--l~~pg~--~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g 752 (954)
T PRK05367 678 ANMN-AQVG--LARPGD--IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFG 752 (954)
T ss_pred cChh-hccC--CCChhh--cCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHH
Confidence 9952 1111 100112 235999876 8875 2 34467777777766655442210 111111221
Q ss_pred ----HHHHHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHHHhcCCeeeEe----ecceeEEEEEeeCCCCCCCCHHHH
Q 013235 361 ----TAAGHAVLKVIQKDKLQNNAH---VVGSYLKERLTALKDKYGIIGDVR----GRGFLLGVEFVTDRQLKTPAKAET 429 (447)
Q Consensus 361 ----~aaala~L~~i~~~~l~~~~~---~~g~~l~~~L~~l~~~~~~i~~vr----g~Gl~~giel~~~~~~~~p~~~~~ 429 (447)
...+...|..+=.+++.+.++ .+.+|+.++|++. +++...-. -...++ .+..-+ ......+
T Consensus 753 ~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~~~~~~~~~~~~~e~i~--~~~~~~---~~~g~~~ 824 (954)
T PRK05367 753 SASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH---YPVLYTGANGRVAHECIL--DLRPLK---ESTGITV 824 (954)
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cCccccCCCCCcccceEE--Eeeccc---ccCCCCH
Confidence 111223344444456665555 7888999988764 22211100 001111 111000 0001124
Q ss_pred HHHHHHHHhCCceeec
Q 013235 430 LYIMDKMKGICALFFS 445 (447)
Q Consensus 430 ~~~~~~l~~~Gvlv~~ 445 (447)
..+.+.|.+.|+....
T Consensus 825 ~di~krL~d~G~~~~t 840 (954)
T PRK05367 825 DDIAKRLIDYGFHAPT 840 (954)
T ss_pred HHHHHHHHHCCCeEee
Confidence 6799999999998754
No 341
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.79 E-value=9.5e-07 Score=88.61 Aligned_cols=278 Identities=10% Similarity=0.036 Sum_probs=148.5
Q ss_pred CHHHHHHHHHHHHhccccc------cccc---chHHHHHHHHHHHhCCC--CCceEEEcCCHHHHHHHHHHHHHhhcCCC
Q 013235 117 HPYVVDSIVNQIKRIQHST------VLYL---NHAIADFAEALASKMPG--NLKVVFFTNSGTEANELAIMMARLYTGCN 185 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~~~~~------~~~~---~~~~~elae~L~~~~~~--~~~~v~~~~sGseA~e~Aik~ar~~t~~~ 185 (447)
+..|++|+.+.+....... .... .....+..++|.+++.. +.+.+++.+|||+|+|+++.-... +.+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~--~~~ 81 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA--EGK 81 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC--CCC
Confidence 4578888888776432110 0011 14556777888888763 234455557799999999974432 456
Q ss_pred eEEEEcCCcccCchhhhhccCCCCccccccCCCe-EeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEcccc
Q 013235 186 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV-HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQ 264 (447)
Q Consensus 186 ~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~-~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~ 264 (447)
+++++..+..|....-++-. .|. ..+..+ ...+|+.. .+++++... + ++.+|.+--+-
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~-----------~g~~~~~~~~--~~~~~~~~-----~~~~~~~~~--~-~~~~v~~th~E 140 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKK-----------YGVVNVVASG--KEGNYTKI-----PDPSTWEIS--E-DAAYVHYCANE 140 (349)
T ss_pred eEEEEECCHHHHHHHHHHHH-----------hCCcEEEecc--ccCCCCCC-----CCHHhcCCC--C-CCCEEEEcCCC
Confidence 77777777766655333211 121 222211 11223221 122221111 2 34444444444
Q ss_pred CCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCcc-ccccccCHHH
Q 013235 265 GVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIP-LGAVVTTPEI 341 (447)
Q Consensus 265 ~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~p-igav~~~~~i 341 (447)
.++|+..+ ++++.+|+++|+|=||+ +|- .-.-.+.+ |++++| |.+| .| +|.+..+++.
T Consensus 141 TstGv~~~---------~l~~~~~~l~iVDavss-~g~---~~id~~~~----d~~~~ssqK~lg--P~Glg~l~~s~~~ 201 (349)
T TIGR01364 141 TIHGVEFR---------ELPDVKNAPLVADMSSN-ILS---RPIDVSKF----GLIYAGAQKNIG--PAGLTVVIVRKDL 201 (349)
T ss_pred CcccEecc---------eecccCCCeEEEEcccc-ccC---ccCCHHHc----cEEEEecccccC--CCceEEEEECHHH
Confidence 55666542 66777899999999997 431 11122322 577766 9885 33 7889999998
Q ss_pred HHhhcCCc-----------ccccCCCChHHHH-HHHHHHHHHhhh-h---HHHHHHHHHHHHHHHHHHHHHhcCCee--e
Q 013235 342 AEVLTRRN-----------YFNTFGGNPVCTA-AGHAVLKVIQKD-K---LQNNAHVVGSYLKERLTALKDKYGIIG--D 403 (447)
Q Consensus 342 ~~~l~~~~-----------~~~T~~~np~a~a-aala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~i~--~ 403 (447)
.+.+.+.. ...+++..++... +..++|+.+.++ + +.++.+++.++++++|+++-.-+.... .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~ 281 (349)
T TIGR01364 202 LGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPR 281 (349)
T ss_pred HhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHH
Confidence 87654321 0123334344444 445689988765 3 345555666666666666521000101 1
Q ss_pred EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 404 vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.|. ...+.+.+.+ .....++.+.+.++|+.+..
T Consensus 282 ~rs-~~v~sf~~~~--------~~~~~~~~~~~~~~Gi~~~~ 314 (349)
T TIGR01364 282 NRS-RMNVVFTLGN--------EELEKRFLKEAEERGLVSLK 314 (349)
T ss_pred HcC-CeEEEEecCC--------hhHhHHHHHHHHHCCCcccC
Confidence 121 2344554421 11235676788899985543
No 342
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=7.7e-07 Score=84.02 Aligned_cols=275 Identities=16% Similarity=0.115 Sum_probs=144.5
Q ss_pred chHHHHHHHHHHHhCCCC--CceEEEcCCHHHHHHHHHHHHHhh--cCC-Ce-EEEEcCCcccCchhhhhccCCCCcccc
Q 013235 140 NHAIADFAEALASKMPGN--LKVVFFTNSGTEANELAIMMARLY--TGC-ND-IISLRNAYHGNAAGTMGATAQSNWKFN 213 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~--~~~v~~~~sGseA~e~Aik~ar~~--t~~-~~-ii~~~~~yHG~~~~~~~~t~~~~~~~~ 213 (447)
...+..|+..|.+.+..+ .+++.++|+...|--.+..+.--+ .|. ++ ++-+.+-|-|+....+---.--.++
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~k-- 154 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAK-- 154 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeecc--
Confidence 455667777777777544 468889998887777766543221 122 23 3445777877765443210000011
Q ss_pred ccCCCeEeecC-CCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEE
Q 013235 214 VVQTGVHHALN-PDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 214 ~~~~g~~~~~~-p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
+.+...+. -..|+ -| .++|+ ..+.+.+|++.---+++|.+. +++.+.+|..++++||+++|
T Consensus 155 ---P~iel~~~g~FKY~----vD----F~~l~------i~e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA~~~giPli 216 (417)
T COG3977 155 ---PNIELLPAGQFKYH----VD----FEHLH------IGESTGAICVSRPTNPTGNVL-TDEELAKLDALARQHGIPLI 216 (417)
T ss_pred ---CCcccccccceeec----cC----HHHcc------cccccceEEecCCCCCCCCcc-cHHHHHHHHHHhhhcCCcEE
Confidence 11111110 00111 12 22222 134788888886556666665 78889999999999999999
Q ss_pred EeccccCccccCCCcccccccCCCCCEE-Ee--eccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHH
Q 013235 293 ADEVQAGFARTGSHFWGFEAHGVVPDIV-TM--AKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 293 ~DEv~tGfgr~G~~~~~~~~~gv~pDiv-t~--sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~ 369 (447)
+|.+| |.-.-| -.|.--..-..++|+ || ||.==.|.++|.++++++++..+.+....-+ ..|-.+..|+++ +
T Consensus 217 IDnAY-g~PFP~-iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iis--Lap~~~G~Aia~-~ 291 (417)
T COG3977 217 IDNAY-GVPFPG-IIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIIS--LAPGRMGPAIAA-E 291 (417)
T ss_pred Eeccc-CCCCCc-eecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceee--ecCCCccHHHHH-H
Confidence 99998 443333 122111111235655 44 4532258899999999999998875321111 111111122221 3
Q ss_pred HHhhhhHHHHHHHHHHHH-HHH----HHHHHHhcC--CeeeEeecce-eEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCc
Q 013235 370 VIQKDKLQNNAHVVGSYL-KER----LTALKDKYG--IIGDVRGRGF-LLGVEFVTDRQLKTPAKAETLYIMDKMKGICA 441 (447)
Q Consensus 370 ~i~~~~l~~~~~~~g~~l-~~~----L~~l~~~~~--~i~~vrg~Gl-~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gv 441 (447)
+|++.++.+-.+++.+=| +++ ..-+.+..+ ...--++.|. |.++=|.+- | ....++.+.|+.+||
T Consensus 292 mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dL-----P--Itt~~LYq~LKa~Gv 364 (417)
T COG3977 292 MIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDL-----P--ITTEELYQRLKARGV 364 (417)
T ss_pred HhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccC-----C--CCHHHHHHHHHhCeE
Confidence 344444444333332211 111 111211122 1222355664 444444332 2 225789999999999
Q ss_pred eeecc
Q 013235 442 LFFSQ 446 (447)
Q Consensus 442 lv~~~ 446 (447)
++-++
T Consensus 365 l~VPG 369 (417)
T COG3977 365 LMVPG 369 (417)
T ss_pred EEecc
Confidence 98653
No 343
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.71 E-value=1.7e-06 Score=87.18 Aligned_cols=275 Identities=12% Similarity=0.069 Sum_probs=153.3
Q ss_pred CCHHHHHHHHHHHHhc----------ccccccccchHHHHHHHHHHHhCCC--CCceEEEcCCHHHHHHHHHHHHHhhcC
Q 013235 116 CHPYVVDSIVNQIKRI----------QHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEANELAIMMARLYTG 183 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~----------~~~~~~~~~~~~~elae~L~~~~~~--~~~~v~~~~sGseA~e~Aik~ar~~t~ 183 (447)
.+++|.+|+.+.+... .|....| .....+..++|++++.. +.+.+++.+||+.|+|+++.-... .
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f-~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~--~ 90 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEF-EAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG--G 90 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHH-HHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC--C
Confidence 4789999999887432 2211111 35667888888888864 234667779999999999864332 4
Q ss_pred CCeEEEEcCCcccCchhhhhccCCCCccccccCCCe-EeecCCCCcCCCCCC-ChHHHHHHHHH-HHHccCCCCeEEEEE
Q 013235 184 CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV-HHALNPDPYRGVFGA-DGEMYAKDVQD-LIDFGTSGHVAGFLS 260 (447)
Q Consensus 184 ~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~-~~~~~p~~~~~~~~~-d~~~~~~~le~-~i~~~~~~~~aavi~ 260 (447)
++++.+...+..|....-+.-. .|. ..+..+.. ++. + ..++++ .+.. ++.+|.+
T Consensus 91 g~~~l~i~~G~fg~r~~~~a~~-----------~g~~~~~~~~~~----~g~~~----~~~~~~~~l~~----~~~~V~~ 147 (360)
T PRK05355 91 GKKADYVDTGSWSKKAIKEAKK-----------YGEVNVAASSED----DGFTY----IPPLDEWQLSD----DAAYVHY 147 (360)
T ss_pred CCeEEEEECCHHHHHHHHHHHH-----------hCCceEEecccc----cCCCC----CCChhhccCCC----CCCEEEE
Confidence 4666666666666554322211 011 11111110 111 1 112222 3322 3445555
Q ss_pred ccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccC
Q 013235 261 ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT 338 (447)
Q Consensus 261 Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~ 338 (447)
--+-.++|+..++ +++| +|+++|+|=||+ +|- .-.-.+.+ |++++| |.+| -.-+|.+..+
T Consensus 148 th~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~---~~idv~~~----d~~~~ssqK~lg-P~Glg~l~~s 209 (360)
T PRK05355 148 TSNETIDGTEFHE---LPDT------GDVPLVADMSSD-ILS---RPIDVSKF----GLIYAGAQKNIG-PAGLTIVIVR 209 (360)
T ss_pred ccCCCcceEecCc---cccc------CCCcEEEEcCcc-ccC---ccCCHHHc----cEEEEecccccc-CCceEEEEEC
Confidence 5555667777532 4444 899999999997 431 12222322 577776 9885 2227889999
Q ss_pred HHHHHhhcCC-c----------ccccCCCChHH-HHHHHHHHHHHhhh-h---HHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 339 PEIAEVLTRR-N----------YFNTFGGNPVC-TAAGHAVLKVIQKD-K---LQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 339 ~~i~~~l~~~-~----------~~~T~~~np~a-~aaala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
++..+.+.+. . ...+++..++. ..+..++|+.+.++ + ..++.+++.++++++|+++- -+....
T Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~-~~~~~~ 288 (360)
T PRK05355 210 EDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD-FYRNPV 288 (360)
T ss_pred HHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC-CcccCC
Confidence 9988776541 1 11233443444 44455789988766 3 45566666677777766652 111111
Q ss_pred e--EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 403 D--VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 403 ~--vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+ .|. +..+.+.+ |......++.+.+.++|+.+.
T Consensus 289 ~~~~rs-~~v~sf~~--------~~~~~~~~~~~~~~~~Gi~~~ 323 (360)
T PRK05355 289 APEDRS-RMNVPFTL--------ADEELDKKFLAEAKAAGLVGL 323 (360)
T ss_pred ChhhcC-CcEEEEEc--------CChHHHHHHHHHHHHCCCccc
Confidence 1 221 23445544 222233567778889999874
No 344
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.70 E-value=1.5e-06 Score=87.68 Aligned_cols=275 Identities=11% Similarity=0.049 Sum_probs=152.4
Q ss_pred CHHHHHHHHHHHHh---cccccccccchHHHHHHHHHHHhCCCC-CceEEE-cCCHHHHHHHHHHHHHhhcCCCeEEEEc
Q 013235 117 HPYVVDSIVNQIKR---IQHSTVLYLNHAIADFAEALASKMPGN-LKVVFF-TNSGTEANELAIMMARLYTGCNDIISLR 191 (447)
Q Consensus 117 ~p~v~~A~~~~l~~---~~~~~~~~~~~~~~elae~L~~~~~~~-~~~v~~-~~sGseA~e~Aik~ar~~t~~~~ii~~~ 191 (447)
+|+|.+|+.++... ..|-+..+ ...+.+..++|++++... ..+|+| .+|||.+++.++.-.. .+ +.+.+.
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~~~f-~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~--~~--~~l~i~ 89 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQAPV-KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI--EK--KSLHLS 89 (361)
T ss_pred CHHHHHHHHhcCccccccCcCChHH-HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--cc--cccEEe
Confidence 68899987754211 12433222 456677888888888653 235666 5889999999996432 12 333344
Q ss_pred CCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceee
Q 013235 192 NAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIE 271 (447)
Q Consensus 192 ~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~ 271 (447)
.+.||....-.+... .|. ..+..++.+ ++.+ ++..+ ..++..|.+-..-+.+|++.
T Consensus 90 ~G~~~~~~~~~a~~~--~~~-----~~~~~~~~~------~~~~-------~~~~~----~~~~~lV~~~h~et~tG~~~ 145 (361)
T TIGR01366 90 FGEFSSKFAKAVKLA--PWL-----GEPIIVTAD------PGSA-------PEPQA----DPGVDVIAWAHNETSTGVAV 145 (361)
T ss_pred cCHHHHHHHHHHHhh--hcc-----CCceEEecC------CCCC-------CCCcc----CCCCCEEEEcccCCccceec
Confidence 455554444333221 000 012233222 1111 11111 13667777777778888888
Q ss_pred CCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccC--CccccccccCHHHHHhhcC
Q 013235 272 LAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN--GIPLGAVVTTPEIAEVLTR 347 (447)
Q Consensus 272 ~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~--G~pigav~~~~~i~~~l~~ 347 (447)
| +++| ++++|+++|+|=+|+ +|- ...-++ . .|++++| |.+++ | ++.++.++++.+.+..
T Consensus 146 p----i~~I---~~~~g~~~iVDavqs-~g~---~~idv~--~--~D~~~~s~~K~lg~~~G--l~~~~~s~~~~~~~~~ 208 (361)
T TIGR01366 146 P----VRRP---EGSDDALVVIDATSG-AGG---LPVDIA--E--TDVYYFAPQKNFASDGG--LWLAIMSPAALERIEA 208 (361)
T ss_pred c----cccc---cccCCCeEEEEcCcc-ccC---CCCCHH--H--CCEEEEEchhhcCCCCc--eEEEEECHHHHhhhhc
Confidence 7 5444 689999999999997 431 121222 1 5999887 98873 3 4556678877765542
Q ss_pred Cc--------c------------cccCCCChHHHH-HHHHHHHHHhhh-h---HHHHHHHHHHHHHHHHHHHHHhcCCee
Q 013235 348 RN--------Y------------FNTFGGNPVCTA-AGHAVLKVIQKD-K---LQNNAHVVGSYLKERLTALKDKYGIIG 402 (447)
Q Consensus 348 ~~--------~------------~~T~~~np~a~a-aala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~i~ 402 (447)
.. + ..|++..++... +..++|+.++++ + ..++.+++.++++++|.++..-...+.
T Consensus 209 ~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~ 288 (361)
T TIGR01366 209 IAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVT 288 (361)
T ss_pred ccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 10 0 134444455544 555778888755 2 346666777777777777631101111
Q ss_pred e--EeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 403 D--VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 403 ~--vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
. .+. .....+.|. +. .....+.+.|.++||.+...
T Consensus 289 ~~~~~s-~~v~~v~~~-~g-------~~~~~v~~~L~~~gI~i~~~ 325 (361)
T TIGR01366 289 DPGKRS-QVVGTIDFV-DD-------IDAATVAKILRANGIVDTEP 325 (361)
T ss_pred Chhhcc-cceEEEECC-Cc-------cCHHHHHHHHHHCCCeeccC
Confidence 1 111 111233442 11 11356888888899987543
No 345
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.66 E-value=9.8e-07 Score=86.03 Aligned_cols=270 Identities=16% Similarity=0.124 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHhccccccccc-----chHHHHHHHHHHHh--CCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEE
Q 013235 118 PYVVDSIVNQIKRIQHSTVLYL-----NHAIADFAEALASK--MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL 190 (447)
Q Consensus 118 p~v~~A~~~~l~~~~~~~~~~~-----~~~~~elae~L~~~--~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~ 190 (447)
..+++.+..-++..+-+...|. .-.+...|+-+.++ .|.+.+.||++.+.|.|+...|++.-.. .++.|++.
T Consensus 89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-~~~GvliP 167 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-KKTGVLIP 167 (475)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-CCCceEee
Confidence 3455555555554432222333 33445566666655 3556788999999999999999977543 66788888
Q ss_pred cCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCcee
Q 013235 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGII 270 (447)
Q Consensus 191 ~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~ 270 (447)
-+-|.=++... ++- |...+++=......|+.|.+++...+++..+.+ +-.+.+|++|-+..| .
T Consensus 168 iPQYPLYsAti-~l~------------~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i--~~r~lvvINPGNPTG--q 230 (475)
T KOG0258|consen 168 IPQYPLYSATI-SLL------------GGTQVPYYLDEESNWSLDVAELERSVDEARKGI--NPRALVVINPGNPTG--Q 230 (475)
T ss_pred cCCCchhHHHH-HHh------------CCcccceeeccccCCCCCHHHHHHHHHHHhccC--CceEEEEECCCCccc--h
Confidence 88886544322 221 222333322345568778544444444444323 245788999987665 3
Q ss_pred eCCCChHHHHHHHHHHhCCEEEEeccccC-ccccCCCcccccc----cC-CCCCEE------EeeccccC--Cccccccc
Q 013235 271 ELAPGYLPAVYKSIKKAGGLCIADEVQAG-FARTGSHFWGFEA----HG-VVPDIV------TMAKGIGN--GIPLGAVV 336 (447)
Q Consensus 271 ~~~~~~l~~l~~l~~~~g~llI~DEv~tG-fgr~G~~~~~~~~----~g-v~pDiv------t~sK~lg~--G~pigav~ 336 (447)
+.+++-+++|.++|.++|++|+.||||.. ..-.|++|+++.. .| -.||-+ ..||++.+ |.+-|+.-
T Consensus 231 vls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 231 VLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred hhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 44788899999999999999999999775 3345557777742 22 345433 46799874 66666643
Q ss_pred c---CHHHHHhhcCC---ccc--------------ccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 013235 337 T---TPEIAEVLTRR---NYF--------------NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD 396 (447)
Q Consensus 337 ~---~~~i~~~l~~~---~~~--------------~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~ 396 (447)
. .+++.+.+.+. ... ...-|.+- -.+..-+++...+.++...+.+.+.++.+
T Consensus 311 v~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~S------y~~~~~Ekd~il~~l~~ra~l~~~~~ns~-- 382 (475)
T KOG0258|consen 311 SLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPS------YDLFSSEKDGILSSLRSRAKLTEDAFNSL-- 382 (475)
T ss_pred cccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcc------hhhhhhhhHhHHHHHHHHhHHHHHHHhhc--
Confidence 2 34444433221 011 11112110 01121234556677777777777766665
Q ss_pred hcCCeeeEeecceeEEEEE
Q 013235 397 KYGIIGDVRGRGFLLGVEF 415 (447)
Q Consensus 397 ~~~~i~~vrg~Gl~~giel 415 (447)
+.+.+-+-.|.|..+.=
T Consensus 383 --~gi~cn~~qGAMY~fP~ 399 (475)
T KOG0258|consen 383 --EGISCNPVQGAMYLFPQ 399 (475)
T ss_pred --CceeeccCccceeeccc
Confidence 56777788898887654
No 346
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.64 E-value=8.2e-06 Score=85.81 Aligned_cols=214 Identities=16% Similarity=0.122 Sum_probs=121.0
Q ss_pred EEEcCCHHHHHHHHHHHHHhhcC-----------------------CCeEEEEcCCcccCchhhhhccCCCCccccccCC
Q 013235 161 VFFTNSGTEANELAIMMARLYTG-----------------------CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (447)
Q Consensus 161 v~~~~sGseA~e~Aik~ar~~t~-----------------------~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~ 217 (447)
-.|+++||+||..|+..||...- ++.+|+....-|-+...+....+. ...
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lgl-------g~~ 234 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGI-------GRD 234 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCC-------Ccc
Confidence 46899999999999999987421 122444444555444333222211 011
Q ss_pred CeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
.+..++..... .-| .++|++.|++. ...++.+|+......+.|.+.| +++|.++|+++|+.+.+|-
T Consensus 235 ~v~~vp~d~~g----~~d----~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDa 302 (522)
T TIGR03799 235 NLIAIKTDANN----RID----VDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELGCHFHVDA 302 (522)
T ss_pred cEEEEEeCCCC----cCC----HHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEc
Confidence 24444432211 134 45666666421 1124555555444456788888 9999999999999999999
Q ss_pred cccCccccCCCcccccccCC-CCCEEEee--ccccCCccccccccC-HHHHHhhcCC-cc----------cccCCCC-hH
Q 013235 296 VQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTT-PEIAEVLTRR-NY----------FNTFGGN-PV 359 (447)
Q Consensus 296 v~tGfgr~G~~~~~~~~~gv-~pDivt~s--K~lg~G~pigav~~~-~~i~~~l~~~-~~----------~~T~~~n-p~ 359 (447)
+|.|....-.++ -....|+ ..|.++++ |-+.+-+..|+++.+ ++..+.+... .+ ..++.+. +.
T Consensus 303 A~gg~~~~~~~~-r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~ 381 (522)
T TIGR03799 303 AWGGATLLSNTY-RHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPG 381 (522)
T ss_pred hhhhHHHhCHHH-HHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcch
Confidence 997642111000 0002344 67999987 877666777888775 4555544331 01 0123332 22
Q ss_pred HHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHH
Q 013235 360 CTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 360 a~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l 394 (447)
......++|+.+..++ +.++..++.++|.+.|++.
T Consensus 382 ~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~ 419 (522)
T TIGR03799 382 MAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ 419 (522)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 2223456677765544 4566666677777666553
No 347
>PLN02880 tyrosine decarboxylase
Probab=98.60 E-value=6e-06 Score=86.43 Aligned_cols=280 Identities=11% Similarity=0.037 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHhCCCCC-------ceEEEcCCHHHHHHHHHHHHHhhc-------C-CCeEEEEcCCcccCchhhhhccC
Q 013235 142 AIADFAEALASKMPGNL-------KVVFFTNSGTEANELAIMMARLYT-------G-CNDIISLRNAYHGNAAGTMGATA 206 (447)
Q Consensus 142 ~~~elae~L~~~~~~~~-------~~v~~~~sGseA~e~Aik~ar~~t-------~-~~~ii~~~~~yHG~~~~~~~~t~ 206 (447)
...++.+.|++++.-+. .--+|++||||||..|+..||... + ++-++.....-|-+..-+..+.+
T Consensus 123 lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lG 202 (490)
T PLN02880 123 LEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAG 202 (490)
T ss_pred HHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcC
Confidence 33455566666663221 125689999999999999998642 1 22344445555766666655543
Q ss_pred CCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHH
Q 013235 207 QSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSI 284 (447)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~ 284 (447)
.. ...+..++.... +.+.-| .++|++.|++. ....+.+|+..--....|.+-| +++|.++|
T Consensus 203 lg-------~~~v~~Vp~d~~--~~~~md----~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~ 265 (490)
T PLN02880 203 IH-------PENCRLLKTDSS--TNYALA----PELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIA 265 (490)
T ss_pred CC-------HHHEEEeecCCC--cCCcCC----HHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHH
Confidence 21 112444554311 111234 45666666431 1235667776655555677777 99999999
Q ss_pred HHhCCEEEEeccccCccccCCCcccccccCC-CCCEEEee--ccccCCccccccccCHH--HHHhhcCCc-cc-------
Q 013235 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE--IAEVLTRRN-YF------- 351 (447)
Q Consensus 285 ~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv-~pDivt~s--K~lg~G~pigav~~~~~--i~~~l~~~~-~~------- 351 (447)
++||+.+.+|-++.|+-..- ..+-....|+ ..|-+++. |-+...++.|+++.+.. ..+.+.... +.
T Consensus 266 ~~~~iwlHVDaA~gg~~~~~-~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~ 344 (490)
T PLN02880 266 KSNGMWFHVDAAYAGSACIC-PEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQA 344 (490)
T ss_pred HHcCCEEEEehhhHHHHHhC-HHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccc
Confidence 99999999999987753221 1111112354 57888754 88876778888887632 222222110 00
Q ss_pred -ccC--------CCChHHHHHHHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCC
Q 013235 352 -NTF--------GGNPVCTAAGHAVLKVIQKDKLQNNAH---VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDR 419 (447)
Q Consensus 352 -~T~--------~~np~a~aaala~L~~i~~~~l~~~~~---~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~ 419 (447)
.++ .+-.......-.+|+.+=.+++.++++ ++.+++.+.|++.. ++.++.. ..-.++.+.+....
T Consensus 345 ~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~-~~el~~~--~~~~iv~Fr~~~~~ 421 (490)
T PLN02880 345 NSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDS-RFEVVTP--RIFSLVCFRLVPPK 421 (490)
T ss_pred cCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEecC--CceEEEEEEEeCCC
Confidence 000 111111222223466555667777777 77788777665532 2222222 12334455554221
Q ss_pred CCCCCCHHHHHHHHHHHHhCCce
Q 013235 420 QLKTPAKAETLYIMDKMKGICAL 442 (447)
Q Consensus 420 ~~~~p~~~~~~~~~~~l~~~Gvl 442 (447)
...........++.++|.+.|-+
T Consensus 422 ~~~~~~~~~n~~l~~~l~~~g~~ 444 (490)
T PLN02880 422 NNEDNGNKLNHDLLDAVNSSGKI 444 (490)
T ss_pred CChhhHHHHHHHHHHHHHhCCCE
Confidence 11000122335677777776643
No 348
>PLN02263 serine decarboxylase
Probab=98.52 E-value=4.9e-05 Score=78.32 Aligned_cols=225 Identities=19% Similarity=0.103 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHhCCCCCc--eEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe
Q 013235 142 AIADFAEALASKMPGNLK--VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (447)
Q Consensus 142 ~~~elae~L~~~~~~~~~--~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~ 219 (447)
...++.+.+++++..+.+ .-+++++|||||..||..||.+.. +.+++....-|-+..-+..+-+. .+
T Consensus 134 ~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~-~~vvy~S~~aH~Sv~KAa~llgi----------~~ 202 (470)
T PLN02263 134 FEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFP-DGILYASRESHYSVFKAARMYRM----------EC 202 (470)
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcC-CcEEEEcCCccHHHHHHHHhcCC----------cc
Confidence 334566667777654321 357899999999999999998643 34666666667666555544332 23
Q ss_pred EeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC-----EEEEe
Q 013235 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG-----LCIAD 294 (447)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~-----llI~D 294 (447)
..++.... +.-| .++|++.|.+.. .++.+|++.--.-+.|.+-| +++|.++|+++|+ .|-+|
T Consensus 203 ~~Vp~d~~----g~mD----~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVD 269 (470)
T PLN02263 203 VKVDTLVS----GEID----CADFKAKLLANK-DKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCD 269 (470)
T ss_pred eEeccCCC----CcCc----HHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEe
Confidence 33443211 1134 677877776432 34666666543334577766 9999999999997 99999
Q ss_pred ccccCccc----cCCCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhcCCc-c----cccCCCC-h-HHH
Q 013235 295 EVQAGFAR----TGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRN-Y----FNTFGGN-P-VCT 361 (447)
Q Consensus 295 Ev~tGfgr----~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~~-~----~~T~~~n-p-~a~ 361 (447)
-++.|+-- .- ..|.+. ...|=+++. |-++.-++.|.++.+++..+.+.... + -.|..|. + ...
T Consensus 270 AA~GG~~lPf~~~~-~~~df~---~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~a 345 (470)
T PLN02263 270 GALFGLMMPFVKRA-PKVTFK---KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 345 (470)
T ss_pred ccchhhHhhhcccc-cccCCC---cCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHH
Confidence 99988522 11 111111 125666655 77777788899999877655553321 1 1233332 1 223
Q ss_pred HHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHH
Q 013235 362 AAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTAL 394 (447)
Q Consensus 362 aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~~l 394 (447)
+..-.+|+.+-.+++. ++..++.+++.++|++.
T Consensus 346 l~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~ 381 (470)
T PLN02263 346 IFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA 381 (470)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444556655455544 55556677888877765
No 349
>PLN02271 serine hydroxymethyltransferase
Probab=98.47 E-value=0.00011 Score=76.62 Aligned_cols=213 Identities=13% Similarity=-0.014 Sum_probs=111.6
Q ss_pred CCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHH
Q 013235 165 NSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQ 244 (447)
Q Consensus 165 ~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le 244 (447)
-||+.||.+++... ..++++|+.++..+=|...-..... ...+.......+..++++.... ....| .++++
T Consensus 221 ~SGs~AN~aV~~AL--l~PGD~IL~ldl~~GGHlshg~~~~--~g~~vs~sG~~~~~vpY~~d~~-~g~ID----yd~le 291 (586)
T PLN02271 221 YSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHMSHGYYTP--GGKKVSGASIFFESLPYKVNPQ-TGYID----YDKLE 291 (586)
T ss_pred ccHHHHHHHHHHHh--cCCCCEEEEecCCCCCchhcccccc--cccccccccceEEEEEcccccc-cCccC----HHHHH
Confidence 39999999998644 3467888888765433322111000 0000000001133333322100 00123 56777
Q ss_pred HHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee-
Q 013235 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA- 323 (447)
Q Consensus 245 ~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s- 323 (447)
+.... .++..||+...... -.--+++++++|+++|++|++|-+|+ .|-.....+- .-+ ...|++|++
T Consensus 292 k~a~~---~rPKLII~g~Sayp------r~~D~~~i~eIAdevGA~LmvD~AH~-aGLIa~g~~~-sP~-~~aDvvt~TT 359 (586)
T PLN02271 292 EKALD---FRPKILICGGSSYP------REWDYARFRQIADKCGAVLMCDMAHI-SGLVAAKECV-NPF-DYCDIVTSTT 359 (586)
T ss_pred HHhhh---cCCeEEEECchhcc------CcCCHHHHHHHHHHcCCEEEEECccc-ccccccCcCC-CCC-cCCcEEEeCC
Confidence 65443 36778888542222 12228999999999999999999997 4432211110 011 136999765
Q ss_pred -ccccCCccccccccCHH--------------------HHHhhcCCcccccCCCChHHHHHHHH-HHHHHhhh---hHHH
Q 013235 324 -KGIGNGIPLGAVVTTPE--------------------IAEVLTRRNYFNTFGGNPVCTAAGHA-VLKVIQKD---KLQN 378 (447)
Q Consensus 324 -K~lg~G~pigav~~~~~--------------------i~~~l~~~~~~~T~~~np~a~aaala-~L~~i~~~---~l~~ 378 (447)
|.|.|-- =|.++.+++ +.+.+....+....+|......||++ +|+.+... ++.+
T Consensus 360 HKtLrGPr-GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~ 438 (586)
T PLN02271 360 HKSLRGPR-GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQ 438 (586)
T ss_pred cccCCCCC-ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHH
Confidence 9986411 144555543 44444433333444444333344443 46655443 4667
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCe
Q 013235 379 NAHVVGSYLKERLTALKDKYGII 401 (447)
Q Consensus 379 ~~~~~g~~l~~~L~~l~~~~~~i 401 (447)
++.++.+.|-+.|.+. .+.++
T Consensus 439 QVv~NAkaLA~~L~~~--G~~vv 459 (586)
T PLN02271 439 QVKKNAQALASALLRR--KCRLV 459 (586)
T ss_pred HHHHHHHHHHHHHHHC--CCeEe
Confidence 7777778877777664 44444
No 350
>PLN02452 phosphoserine transaminase
Probab=98.46 E-value=3.4e-05 Score=77.74 Aligned_cols=290 Identities=10% Similarity=0.043 Sum_probs=158.1
Q ss_pred eEEEecCCcccccCCCCCHHHHHHHHHHHHh----------cccccccccchHHHHHHHHHHHhCCC--CCceEEEcCCH
Q 013235 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKR----------IQHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSG 167 (447)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~----------~~~~~~~~~~~~~~elae~L~~~~~~--~~~~v~~~~sG 167 (447)
+.+.|..|=.. -+++|.+++.+.+-. ..|.+..| .....+..+.|.+++.. +.+.+++..||
T Consensus 7 ~~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f-~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsg 80 (365)
T PLN02452 7 RVFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEF-LSIIQKAEADLRELLDIPDNYEVLFLQGGA 80 (365)
T ss_pred ceEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCchHH-HHHHHHHHHHHHHHhCCCCCceEEEEeCcc
Confidence 34456654432 378999998887643 22322222 35566777777777753 44667778999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecC--CCCcCCCCCCChHHHHHHHHH
Q 013235 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALN--PDPYRGVFGADGEMYAKDVQD 245 (447)
Q Consensus 168 seA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~--p~~~~~~~~~d~~~~~~~le~ 245 (447)
|.++|+++.-... +++++++...++.|....-.+.... .+..+.. ...+... .+ .+++
T Consensus 81 t~~~ea~~~nl~~--~~~~~l~~~~G~fg~r~~~~a~~~g----------~~~~~~~~~~~~~~~~--~~----~~~~-- 140 (365)
T PLN02452 81 STQFAAIPLNLCK--PGDKADFVVTGSWSKKAAKEAKKYC----------KTNVIASGKDEKYTKI--PS----VSEW-- 140 (365)
T ss_pred HHHHHHHHHhcCC--CCCeEEEEECCHHHHHHHHHHHHhC----------CCcEEEecCCCCCCCC--CC----hHHc--
Confidence 9999999874322 4466777766665655433322110 0111110 0100000 01 1222
Q ss_pred HHHccCCCCeEEEEEccccCCCcee-eCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeec
Q 013235 246 LIDFGTSGHVAGFLSESIQGVGGII-ELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAK 324 (447)
Q Consensus 246 ~i~~~~~~~~aavi~Epi~~~gG~~-~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK 324 (447)
+. ..++..|.+-..-..+|+. .+ ++++ + ++++|+|=+++ +| + .-.-.+.+|+ |+..--|
T Consensus 141 --~~--~~~~~~v~~~hnETstGv~~~~----~~~i---~---~~~lvVDa~Ss-~g--~-~pidv~~~~v--~~~saqK 200 (365)
T PLN02452 141 --EL--TPDAKFVHICANETIHGVEFKD----YPDV---G---NVPLVADMSSN-FL--S-KPVDVSKYGV--IYAGAQK 200 (365)
T ss_pred --CC--CCCCcEEEECCCCCCCcEecCc----cccc---C---CCeEEEECCcc-cc--C-cccCHHHcCE--EEEeccc
Confidence 11 1244555554444555664 32 3333 2 38999999997 32 1 2333455665 6655669
Q ss_pred cccC-CccccccccCHHHHHhhcCC-----------cccccCCCC-hHHHHHHHHHHHHHhhh-h---HHHHHHHHHHHH
Q 013235 325 GIGN-GIPLGAVVTTPEIAEVLTRR-----------NYFNTFGGN-PVCTAAGHAVLKVIQKD-K---LQNNAHVVGSYL 387 (447)
Q Consensus 325 ~lg~-G~pigav~~~~~i~~~l~~~-----------~~~~T~~~n-p~a~aaala~L~~i~~~-~---l~~~~~~~g~~l 387 (447)
.+|. | +|.++.++++.+.+... ...++++.. -.+..+..++|+.|+++ + +.++.+++.++|
T Consensus 201 ~lGP~G--l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l 278 (365)
T PLN02452 201 NVGPSG--VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLL 278 (365)
T ss_pred ccCCCC--eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 9952 3 68899999988665431 112344443 44455556789998765 3 456666777777
Q ss_pred HHHHHHHHHhcCCee--eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 388 KERLTALKDKYGIIG--DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 388 ~~~L~~l~~~~~~i~--~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
++.|++...=+.... ..|. ...+.+.+. ......+|.+++.++|++..++
T Consensus 279 ~~~l~~~~G~y~~~~~~~~rs-~~~vsF~~~--------~~~~~~~f~~~~~~~g~~~~~G 330 (365)
T PLN02452 279 YDAIDESNGFYVCPVEKSVRS-LMNVPFTLG--------GSELEAEFVKEAAKAGMVQLKG 330 (365)
T ss_pred HHHHHhCCCcccCCCChHHhC-CeEEEEEcC--------CchhHHHHHHHHHHCCCcccCC
Confidence 777766310011111 1222 223333332 1224678999999999987653
No 351
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.46 E-value=9.9e-05 Score=72.76 Aligned_cols=292 Identities=14% Similarity=0.120 Sum_probs=151.6
Q ss_pred CCCHHHHHHHHHHH-Hhcccc--ccccc-----chHHHHHHHHHH-HhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCC
Q 013235 115 HCHPYVVDSIVNQI-KRIQHS--TVLYL-----NHAIADFAEALA-SKMPGNLKVVFFTNSGTEANELAIMMARLYTGCN 185 (447)
Q Consensus 115 h~~p~v~~A~~~~l-~~~~~~--~~~~~-----~~~~~elae~L~-~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~ 185 (447)
+..|.|.+|.-..+ +++.+. ..+|. -+..++|+-..+ ++++.+.-+| =-.||++||.+++..... +++
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anV-QPhSGs~AN~av~~All~--pGD 113 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANV-QPHSGSQANQAVYLALLQ--PGD 113 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcccc-CCCCchHHHHHHHHHHcC--CCC
Confidence 35688988877655 344222 22322 233444444333 4454433333 346999999988864433 667
Q ss_pred eEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccC
Q 013235 186 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQG 265 (447)
Q Consensus 186 ~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~ 265 (447)
+|+..+-+.=|+..-.. +..+...-+..+++|.... ....| .++++++..+..| ..+|+
T Consensus 114 timgm~l~~GGHltHg~--------~v~~sG~~~~~v~Y~vd~e-t~~ID----yD~~~k~a~e~kP---K~ii~----- 172 (413)
T COG0112 114 TIMGLDLSHGGHLTHGS--------PVNFSGKLFNVVSYGVDPE-TGLID----YDEVEKLAKEVKP---KLIIA----- 172 (413)
T ss_pred eEecccCCCCCcccCCC--------CCCccceeEEeEecccccc-cCccC----HHHHHHHHHHhCC---CEEEE-----
Confidence 77766544322221111 1111111123333322111 01123 6778888876644 45554
Q ss_pred CCceeeCCCChHHHHHHHHHHhCCEEEEecccc-CccccCCCcccccccCCCCCEEEee--ccccCCccccccccC-HHH
Q 013235 266 VGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT-PEI 341 (447)
Q Consensus 266 ~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-Gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~-~~i 341 (447)
|+..-+-+--+++++++|++.|+.|++|=++. |+--.| .|- .-.. ..|+||-+ |.|-| -+=|.++++ +++
T Consensus 173 -G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G--~~p-~P~~-~AdvVTtTTHKTlrG-PrGG~Il~~~eel 246 (413)
T COG0112 173 -GGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGG--VHP-NPLP-HADVVTTTTHKTLRG-PRGGIILTNDEEL 246 (413)
T ss_pred -CccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcc--cCC-CCCC-ccceEeCCcccCCCC-CCceEEEeccHHH
Confidence 22222223338999999999999999999864 332223 111 1111 26899744 88864 123456676 488
Q ss_pred HHhhcCCcccccCCCChHHHHHHHH-HHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEee
Q 013235 342 AEVLTRRNYFNTFGGNPVCTAAGHA-VLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVT 417 (447)
Q Consensus 342 ~~~l~~~~~~~T~~~np~a~aaala-~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~ 417 (447)
.+.+....+..+.+|+-+-..||.+ ++....+. ++++++-++.+.|-+.|.+. .+.++..-. .--++.+++.+
T Consensus 247 ~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--G~~vvsGgT-dnHl~lVDl~~ 323 (413)
T COG0112 247 AKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--GFKVVSGGT-DNHLVLVDLRS 323 (413)
T ss_pred HHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc--CCeEecCCc-cceEEEEEccc
Confidence 8888766566666665444444443 23333333 46677777778777777663 444333110 01244555542
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 418 DRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 418 ~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
... ......+.|-+-||.+..+
T Consensus 324 ~~~-------~Gk~ae~~L~~~~It~NKN 345 (413)
T COG0112 324 KGL-------TGKKAEAALERAGITVNKN 345 (413)
T ss_pred CCC-------CHHHHHHHHHHcCEeeccC
Confidence 110 1233334445568877653
No 352
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.45 E-value=4.1e-05 Score=79.22 Aligned_cols=252 Identities=20% Similarity=0.193 Sum_probs=139.5
Q ss_pred CCHHHHHHHHHHHHhccccccccc--chHHHHHHHHHHHhCCC-CCceEEEcCCHHHHHHHHHHHHHhhcC----C----
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYL--NHAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTG----C---- 184 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~--~~~~~elae~L~~~~~~-~~~~v~~~~sGseA~e~Aik~ar~~t~----~---- 184 (447)
.++...+++...+.+-.-....++ .....++...|++++.. ..-.-.|+.+|||||..|+.+||.... +
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 456666666666554321111222 22233455555566543 223457999999999999999986531 1
Q ss_pred ---CeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecC-CCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEE
Q 013235 185 ---NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALN-PDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLS 260 (447)
Q Consensus 185 ---~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~-p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~ 260 (447)
...|+...+.|-+..-+....+- +...++. |..+ .-| .++|++.+++..... +|+.
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~----------~~~~v~~~~~~~----~id----~~~l~~~i~~~t~~g--~vV~ 213 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGL----------GLRRVPTVPTDY----RID----VDALEEAIDENTIGG--VVVG 213 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCC----------CceeEEeccCcc----ccC----HHHHHHHHHhhccCc--eEEE
Confidence 12455666677666555544332 2222221 1111 123 677888887542211 2444
Q ss_pred ccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccc--cCC-CcccccccCC-CCCEEEee--ccccCCccccc
Q 013235 261 ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR--TGS-HFWGFEAHGV-VPDIVTMA--KGIGNGIPLGA 334 (447)
Q Consensus 261 Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr--~G~-~~~~~~~~gv-~pDivt~s--K~lg~G~piga 334 (447)
---....|.+-+ +++|.++|+++|+.+.+|-++.||-. ... ..|. +++ ..|-|+++ |-...-++.|+
T Consensus 214 ~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~---f~l~~vdSIt~d~HK~g~aP~~~G~ 286 (460)
T COG0076 214 TAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWD---FGLEGVDSITVDGHKYGLAPIGCGV 286 (460)
T ss_pred EecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchhh---cCCCCceEEEECcccccCCCCCceE
Confidence 333334455555 99999999999999999999988732 110 1111 233 34666665 55444467788
Q ss_pred cccCHH--HHHhhcCCccc--------ccCCCC--hHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHH
Q 013235 335 VVTTPE--IAEVLTRRNYF--------NTFGGN--PVCTAAGHAVLKVIQKDKL---QNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 335 v~~~~~--i~~~l~~~~~~--------~T~~~n--p~a~aaala~L~~i~~~~l---~~~~~~~g~~l~~~L~~l 394 (447)
++.+.+ +.+.+.....+ .|-.+. ....++..++|+.+-.+++ .++..++.++|.+.|+++
T Consensus 287 il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 287 VLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL 361 (460)
T ss_pred EEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 887654 44433311100 111122 2234445567777755554 455557888888887776
No 353
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.42 E-value=1.2e-05 Score=81.14 Aligned_cols=248 Identities=15% Similarity=0.115 Sum_probs=124.5
Q ss_pred cCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCc-cccccCCCeEeecCCCCcCCCCCCChHHHHHH
Q 013235 164 TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW-KFNVVQTGVHHALNPDPYRGVFGADGEMYAKD 242 (447)
Q Consensus 164 ~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~-~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~ 242 (447)
.-||+.||.+++.... .++++|+.++-.. |..... .....+ +.......+..++++.... ....| .++
T Consensus 92 p~SGs~An~av~~aLl--~pGD~Im~l~l~~-GGHlsh---g~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID----~d~ 160 (399)
T PF00464_consen 92 PHSGSQANLAVYMALL--KPGDTIMGLSLPH-GGHLSH---GSSVNFKKISASGLYFESVPYPVDPD-TGLID----YDE 160 (399)
T ss_dssp -SSHHHHHHHHHHHHT---TT-EEEEEEGGG-T--GGG---T-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-----HHH
T ss_pred cCCchHHHHHHHHHHH--hhcCcEEecChhh-cccccc---cccccccccccccceEEEEeeeeecC-CCeEC----HHH
Confidence 4699999988886443 3678888886543 222111 000000 0000000122222221100 11124 677
Q ss_pred HHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecccc-CccccCCCcccccccCCCCCEEE
Q 013235 243 VQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GFARTGSHFWGFEAHGVVPDIVT 321 (447)
Q Consensus 243 le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-Gfgr~G~~~~~~~~~gv~pDivt 321 (447)
+++++.+. ++..||+.+..- +-+.+ +++++++|++.|++|++|=.|. |+=-.| .+. .-+.. .|+||
T Consensus 161 l~~~a~~~---kPklIi~G~S~y-----~~~~d-~~~~reIad~vga~l~~D~sH~~GLIa~g--~~~-~P~~~-ADvvt 227 (399)
T PF00464_consen 161 LEKLAKEH---KPKLIICGASSY-----PRPID-FKRFREIADEVGAYLMADISHIAGLIAGG--LFP-NPFPY-ADVVT 227 (399)
T ss_dssp HHHHHHHH-----SEEEEE-SST-----SS----HHHHHHHHHHTT-EEEEE-TTTHHHHHTT--SS---GCCT-SSEEE
T ss_pred HHHHHhhc---CCCEEEECchhc-----cCccC-HHHHHHHHHhcCcEEEecccccccceehh--eec-Ccccc-ceEEE
Confidence 88887765 456788765321 12222 6999999999999999999875 221122 221 22333 69998
Q ss_pred ee--ccccCCccccccccC--------------HHHHHhhcCCcccccCCCChHHHHHHHH-HHHHHhh---hhHHHHHH
Q 013235 322 MA--KGIGNGIPLGAVVTT--------------PEIAEVLTRRNYFNTFGGNPVCTAAGHA-VLKVIQK---DKLQNNAH 381 (447)
Q Consensus 322 ~s--K~lg~G~pigav~~~--------------~~i~~~l~~~~~~~T~~~np~a~aaala-~L~~i~~---~~l~~~~~ 381 (447)
++ |.|.| -+-|.++++ +++.+.+....+....++.-....+|++ +|....+ .++.+++-
T Consensus 228 ~sThKtl~G-PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv 306 (399)
T PF00464_consen 228 GSTHKTLRG-PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVV 306 (399)
T ss_dssp EESSGGG-S-SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred eeccccccc-cCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 76 88874 233556777 7888877754444455554444444443 3444433 35677788
Q ss_pred HHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 382 VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 382 ~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
++.+.|-+.|.+. .+.++..- -..-++.|++.... ....+..+.|.+.||++..+
T Consensus 307 ~NAk~La~~L~~~--G~~v~~gg-Td~H~vlvd~~~~~-------~~g~~a~~~Le~~gI~vnkn 361 (399)
T PF00464_consen 307 KNAKALAEALQER--GFKVVTGG-TDNHQVLVDLRSFG-------IDGKEAEKALEEAGIIVNKN 361 (399)
T ss_dssp HHHHHHHHHHHHT--T-EEGGGS--SSSEEEEEGGGGT-------S-HHHHHHHHHHTTEE-EEE
T ss_pred HHHHHHHHHHhhC--CcEEEECC-CCCCeEEEEecccc-------cchHHHHHHHHhcCeeeccc
Confidence 8888888888775 44433211 01224445543211 11345666778889998643
No 354
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.38 E-value=1.4e-05 Score=80.35 Aligned_cols=281 Identities=11% Similarity=0.064 Sum_probs=142.6
Q ss_pred CCHHHHHHHHHHHHhccccc--ccc-------cchHHHHHHHHHHHhCCC-CCceEEEcCC-HHHHHHHHHHHHHhhcC-
Q 013235 116 CHPYVVDSIVNQIKRIQHST--VLY-------LNHAIADFAEALASKMPG-NLKVVFFTNS-GTEANELAIMMARLYTG- 183 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~--~~~-------~~~~~~elae~L~~~~~~-~~~~v~~~~s-GseA~e~Aik~ar~~t~- 183 (447)
.++.|.+|+.+.+....... ... ......+..++|++++.. ..++|+|+++ ||+|++.++..... .+
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~-~~~ 88 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG-DKG 88 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC-CCC
Confidence 47899999998875431000 000 124567888999998874 3455667654 99999999975421 12
Q ss_pred CCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccc
Q 013235 184 CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI 263 (447)
Q Consensus 184 ~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi 263 (447)
+..+|+ .+.|.-+.. -+.-. . ...+..+..+.. +.|+.. .+..+..+. + ++..|.+--+
T Consensus 89 ~~~~i~-~g~~~~~~~-~~a~~------~---g~~~~~~~~~~~--g~~~~~----~~~~~~~~~---~-~~~lV~~~h~ 147 (355)
T cd00611 89 TADYVV-TGAWSAKAA-KEAKR------Y---GGVVVIVAAKEE--GKYTKI----PDVETWDLA---P-DAAYVHYCSN 147 (355)
T ss_pred eEEEEE-CCHHHHHHH-HHHHh------c---CCCcEEEecccc--cCCCCC----CCHhhcCCC---C-CCCEEEEeCC
Confidence 223332 233321110 01000 0 012233332211 112110 011111111 2 4455666666
Q ss_pred cCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEe--eccccCCccccccccCHHH
Q 013235 264 QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGNGIPLGAVVTTPEI 341 (447)
Q Consensus 264 ~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~--sK~lg~G~pigav~~~~~i 341 (447)
...+|... .++++.||+++++|=+|+ +|- .-.-.+.++ ++.. -|.+| -.-+|.++.++++
T Consensus 148 ~t~tG~~~---------~~i~~~~g~~~~VDa~qs-~g~---~~idv~~~~----~~~ss~~K~lG-P~G~g~l~~~~~~ 209 (355)
T cd00611 148 ETIHGVEF---------DEVPDTGGVPLVADMSSN-ILS---RPIDVSKFG----VIYAGAQKNLG-PAGVTVVIVRKDL 209 (355)
T ss_pred cccccEEc---------ceecccCCCeEEEEcccc-ccC---CCCCHHHhC----EEEeecccccC-CCceEEEEECHHH
Confidence 66667753 245566999999999997 432 122223333 3333 38774 1227889999988
Q ss_pred HHhhcCCc-----------ccccCCCCh-HHHHHHHHHHHHHhhh-h---HHHHHHHHHHHHHHHHHHHHHhcCCeeeEe
Q 013235 342 AEVLTRRN-----------YFNTFGGNP-VCTAAGHAVLKVIQKD-K---LQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (447)
Q Consensus 342 ~~~l~~~~-----------~~~T~~~np-~a~aaala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr 405 (447)
.+.+.... ...+++..+ ....+..++|+.++++ + ..++.+++.++++++|+++..-+....+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~ 289 (355)
T cd00611 210 LGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKR 289 (355)
T ss_pred HhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHH
Confidence 87654310 011233333 3455555788988765 3 446666777777777776521010111101
Q ss_pred ec-ceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 406 GR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 406 g~-Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
.+ +..+.+.+... ....++.+.+.++|+.+.
T Consensus 290 ~rs~~vvsf~~~~~--------~l~~~~~~~~~r~G~~~~ 321 (355)
T cd00611 290 ARSRMNVPFRLGKE--------ELEKEFLKEAEAAGMIGL 321 (355)
T ss_pred HcCceEEEEEcCCh--------hhhHHHHHHHHHCCCccc
Confidence 12 24455554221 112445567788898643
No 355
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.35 E-value=9.6e-05 Score=74.05 Aligned_cols=280 Identities=13% Similarity=0.101 Sum_probs=148.5
Q ss_pred CHHHHHHHHHHHHhc----------ccccccccchHHHHHHHHHHHhCCC--CCceEEEcCCHHHHHHHHHHHHHhhcCC
Q 013235 117 HPYVVDSIVNQIKRI----------QHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEANELAIMMARLYTGC 184 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~----------~~~~~~~~~~~~~elae~L~~~~~~--~~~~v~~~~sGseA~e~Aik~ar~~t~~ 184 (447)
+++|.+++++.+-.. .|.+..| .....+..+.|.+++.. +.+.+++..|||.+.++++.-... ++
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F-~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~--~g 92 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSSWF-SSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSR--PG 92 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccHHH-HHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCC--CC
Confidence 688999888777552 2322221 34556677777777653 456666677799999998864322 33
Q ss_pred CeEE-EEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccc
Q 013235 185 NDII-SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI 263 (447)
Q Consensus 185 ~~ii-~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi 263 (447)
++++ ++..++.|....-.+.. + ..+..+... ....|+.-.. .+++ +. ..+...|.+-.+
T Consensus 93 ~~~~~~~~tG~fg~r~~~ea~~------~----g~v~~~~~~--~~~~~~~~p~--~~~~----~~--~~d~~~v~~t~N 152 (364)
T PRK12462 93 AAAPEYVTTGYWSRKAIGEASR------V----AAMRVVWDG--AASGYRTLPS--LAEL----DW--DARAPFRHYVSN 152 (364)
T ss_pred CcEEEEEeCCHHHHHHHHHHHh------c----CCceEecCc--CCCCCCcCCC--HHHh----cc--CCCCcEEEEccC
Confidence 4444 55555544433222111 0 011111100 0001111000 1222 11 113455555555
Q ss_pred cCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHHH
Q 013235 264 QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEI 341 (447)
Q Consensus 264 ~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i 341 (447)
-..+|+..+ ++.+.+++++|+|=+-+ ++ + .-.-++.| |++..| |+||. --++.++.+++.
T Consensus 153 ETstGv~~~---------~~~~~~~~llvvD~sS~-~~--s-~pid~~~~----dvi~agsQKnlgP-~Gltvvivs~~a 214 (364)
T PRK12462 153 ETVEGLQFP---------DAAGLPDSPLIADMSSD-FM--S-RPFDVEAY----GMVYAHAQKNLGP-AGVTVAIIRRAL 214 (364)
T ss_pred CCCceEecC---------cccccCCCeEEEEcCch-hh--C-CCCChHHc----cEEEeeccccCCC-CceEEEEECHHH
Confidence 555666653 23334689999998754 32 2 22333444 888776 99982 124667888888
Q ss_pred HHhhcCC-----------cccccCCCCh-HHHHHHHHHHHHHhhh--h---HHHHHHHHHHHHHHHHHHHHHhcCCe--e
Q 013235 342 AEVLTRR-----------NYFNTFGGNP-VCTAAGHAVLKVIQKD--K---LQNNAHVVGSYLKERLTALKDKYGII--G 402 (447)
Q Consensus 342 ~~~l~~~-----------~~~~T~~~np-~a~aaala~L~~i~~~--~---l~~~~~~~g~~l~~~L~~l~~~~~~i--~ 402 (447)
++..... ...+++...| ....+...+|++|.++ + +.++.++.++.+++.+.++..-|... .
T Consensus 215 l~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~ 294 (364)
T PRK12462 215 LERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHR 294 (364)
T ss_pred HhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh
Confidence 7654331 0124555544 4455566789999776 4 34555566666666666652112111 2
Q ss_pred eEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 403 ~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
+.|+ .| -|.|. .++++...+|.+++.++|++-..+
T Consensus 295 ~~RS--~m-nv~f~------~~~~~l~~~f~~~a~~~gl~~lkG 329 (364)
T PRK12462 295 AARS--TM-NVAFR------FRQPRLDTLFKEQSTEAGFCGLSG 329 (364)
T ss_pred hhcC--cc-eEEEE------cCCHHHHHHHHHHHHHCCCccccC
Confidence 2333 22 22232 133456678999999999986543
No 356
>PLN02590 probable tyrosine decarboxylase
Probab=98.32 E-value=0.00075 Score=71.21 Aligned_cols=279 Identities=10% Similarity=0.052 Sum_probs=144.8
Q ss_pred HHHHHHHHHhCCCCC-------ceEEEcCCHHHHHHHHHHHHHhhcC-------C-CeEEEEcCCcccCchhhhhccCCC
Q 013235 144 ADFAEALASKMPGNL-------KVVFFTNSGTEANELAIMMARLYTG-------C-NDIISLRNAYHGNAAGTMGATAQS 208 (447)
Q Consensus 144 ~elae~L~~~~~~~~-------~~v~~~~sGseA~e~Aik~ar~~t~-------~-~~ii~~~~~yHG~~~~~~~~t~~~ 208 (447)
.++.+.|++++..+. .--+|+++|||||..||..||.... . +-+++....-|-+..-+..+.+..
T Consensus 173 ~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg 252 (539)
T PLN02590 173 IIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIH 252 (539)
T ss_pred HHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCC
Confidence 344555555553221 1256899999999999999987421 1 224444555565555444443311
Q ss_pred CccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH
Q 013235 209 NWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK 286 (447)
Q Consensus 209 ~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~ 286 (447)
...+..++... ...+.-| .++|++.|++. ....+.+|+..--....|.+-| |++|.++|++
T Consensus 253 -------~~~vr~Vp~d~--~~~~~md----~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~~ 315 (539)
T PLN02590 253 -------EENIRLLKTDS--STNYGMP----PESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAKK 315 (539)
T ss_pred -------cccEEEEeCCC--CCCCcCC----HHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHH
Confidence 12345555431 1112234 45566666431 1224566666654455677766 9999999999
Q ss_pred hCCEEEEeccccCccccCCCcccccccCC-CCCEEEee--ccccCCccccccccCHH--HHHhhcCCc-c----------
Q 013235 287 AGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE--IAEVLTRRN-Y---------- 350 (447)
Q Consensus 287 ~g~llI~DEv~tGfgr~G~~~~~~~~~gv-~pDivt~s--K~lg~G~pigav~~~~~--i~~~l~~~~-~---------- 350 (447)
||+.|-+|-++.|+...-.+. -.-..|+ ..|=+++. |-+...++.|+++.+.. +.+.+.... +
T Consensus 316 ~g~WlHVDaA~GG~al~~~~~-r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~ 394 (539)
T PLN02590 316 YGIWLHVDAAYAGNACICPEY-RKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDT 394 (539)
T ss_pred hCCeEEEecchhhhhhcChhh-HHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCccccccc
Confidence 999999999998864322111 0011344 45777754 87777788888887643 222221100 0
Q ss_pred ---cc--cCC-CChHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCC
Q 013235 351 ---FN--TFG-GNPVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL 421 (447)
Q Consensus 351 ---~~--T~~-~np~a~aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~ 421 (447)
.. +.. +-+......-.+|+.+-.+++. ++.-++.++|.+.|++. .++.++..+ .. .++.+.+..+...
T Consensus 395 ~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~-~~fel~~~~-~l-~iVcFr~~~~~~~ 471 (539)
T PLN02590 395 VVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD-PSFEVVTTR-YF-SLVCFRLAPVDGD 471 (539)
T ss_pred CCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC-ce-EEEEEEecCCCCC
Confidence 00 111 1233333444556655555554 44445666666666553 123222221 11 1122333211100
Q ss_pred CCCCHHHHHHHHHHHHhCCcee
Q 013235 422 KTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 422 ~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
.........++.+++.+.|.+.
T Consensus 472 ~~~~~~ln~~l~~~l~~~G~~~ 493 (539)
T PLN02590 472 EDQCNERNRELLAAVNSTGKIF 493 (539)
T ss_pred HHHHHHHHHHHHHHHHhCCCEE
Confidence 0001234467888888887543
No 357
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.30 E-value=2.6e-05 Score=76.70 Aligned_cols=273 Identities=14% Similarity=0.079 Sum_probs=147.6
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHHH-HHHHHHHHHHhhc-----------CCCeEEEEcCCcccCchhhhhccCC
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGTE-ANELAIMMARLYT-----------GCNDIISLRNAYHGNAAGTMGATAQ 207 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGse-A~e~Aik~ar~~t-----------~~~~ii~~~~~yHG~~~~~~~~t~~ 207 (447)
-..+.|+.+..++++..+.++|+..++.|- -+.-.|..+..+. ++-+.++..++|-.+..-+-
T Consensus 68 l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E----- 142 (425)
T PF12897_consen 68 LDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITE----- 142 (425)
T ss_dssp SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHH-----
T ss_pred cCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHH-----
Confidence 456677888888888777777766555443 3333444343321 13467777777743222111
Q ss_pred CCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEcccc-CCCceeeCCCChHHHHHHH-HH
Q 013235 208 SNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQ-GVGGIIELAPGYLPAVYKS-IK 285 (447)
Q Consensus 208 ~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~-~~gG~~~~~~~~l~~l~~l-~~ 285 (447)
..|+..++.|....+| | ++.+|+++.+ ...|.++++-|.. +++|+ .++++-.++|..+ +.
T Consensus 143 --------~~Giemi~VpM~~dGP---D----mD~Ve~LV~~--D~svKGiWcVP~ySNPtG~-tySde~vrrlA~m~~A 204 (425)
T PF12897_consen 143 --------HFGIEMIPVPMTEDGP---D----MDMVEELVAE--DPSVKGIWCVPKYSNPTGI-TYSDEVVRRLAAMKTA 204 (425)
T ss_dssp --------HCT-EEEEEEEETTEE--------HHHHHHHTHT--STTEEEEEE-SSS-TTT------HHHHHHHHHS--S
T ss_pred --------hhCcEEEecCCCCCCC---C----HHHHHHHHhc--CCccceEEeCCCccCCCCc-cCCHHHHHHHhcCCcC
Confidence 2477777777665544 3 7888888764 3489999999955 44665 4588888888887 34
Q ss_pred HhCCEEEEeccccCccccCC--Cc-----ccccccCCCCCEE----EeeccccCCccccccccCHHHHHhhcCCcccccC
Q 013235 286 KAGGLCIADEVQAGFARTGS--HF-----WGFEAHGVVPDIV----TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTF 354 (447)
Q Consensus 286 ~~g~llI~DEv~tGfgr~G~--~~-----~~~~~~gv~pDiv----t~sK~lg~G~pigav~~~~~i~~~l~~~~~~~T~ 354 (447)
..+..++.|.+|+=--.++. .. .....---.||.+ .+||.--.|-.++++.++++-++.+.......|.
T Consensus 205 A~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tI 284 (425)
T PF12897_consen 205 APDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTI 284 (425)
T ss_dssp STT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S
T ss_pred CcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCcee
Confidence 57899999999863211121 00 0000001147765 4678776777789999999888877654444667
Q ss_pred CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH----HHHHhcC----C-eeeEeecceeEEEEEeeCCCCCCCC
Q 013235 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT----ALKDKYG----I-IGDVRGRGFLLGVEFVTDRQLKTPA 425 (447)
Q Consensus 355 ~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~----~l~~~~~----~-i~~vrg~Gl~~giel~~~~~~~~p~ 425 (447)
+-+-+.+..-..-|+..+ .++.+|+++-.+.|+-+++ .|.++++ + -+..+-.|.|+.++..+.
T Consensus 285 gpdKvNQLRHvrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G------- 356 (425)
T PF12897_consen 285 GPDKVNQLRHVRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG------- 356 (425)
T ss_dssp ---HHHHHHHHHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-------
T ss_pred CccHHHHHHHHHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-------
Confidence 777777766555554322 2566666666665555543 3333333 2 234566799999998643
Q ss_pred HHHHHHHHHHHHhCCceeec
Q 013235 426 KAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 426 ~~~~~~~~~~l~~~Gvlv~~ 445 (447)
.+.++++.|++.||.+.+
T Consensus 357 --~AkrvV~lakeAGV~LT~ 374 (425)
T PF12897_consen 357 --TAKRVVELAKEAGVALTP 374 (425)
T ss_dssp ---HHHHHHHHHHTTEE---
T ss_pred --hHHHHHHHHHHhCceeCC
Confidence 378899999999998754
No 358
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.29 E-value=3.1e-05 Score=76.00 Aligned_cols=253 Identities=17% Similarity=0.144 Sum_probs=140.0
Q ss_pred chHHHHHHHHHHHhCCCCC------ce--EEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCcc
Q 013235 140 NHAIADFAEALASKMPGNL------KV--VFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK 211 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~------~~--v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~ 211 (447)
-....++.+.+.+.+-+.. ++ .+=+.|||-|+-.+-+......++..|-+-+++|--+..-..
T Consensus 68 i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~--------- 138 (396)
T COG1448 68 IEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFE--------- 138 (396)
T ss_pred cCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHH---------
Confidence 4556677777777653311 12 234789999999999887777777888888888743322221
Q ss_pred ccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEE
Q 013235 212 FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291 (447)
Q Consensus 212 ~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ll 291 (447)
..|.....+|+.....-+.|- +.+...+++... ....++-.+-++++|.-+ +++-+++|.++.++.|.+-
T Consensus 139 ----~aGl~v~~Y~Yyd~~~~~~df----~~mla~L~~a~~-~~vvLLH~CcHNPTG~D~-t~~qW~~l~~~~~~r~lip 208 (396)
T COG1448 139 ----AAGLEVETYPYYDAETKGLDF----DGMLADLKTAPE-GSVVLLHGCCHNPTGIDP-TEEQWQELADLIKERGLIP 208 (396)
T ss_pred ----hcCCceeeeeccccccccccH----HHHHHHHHhCCC-CCEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCCee
Confidence 124444444443222222342 333333333323 334555566888888765 7888999999999999999
Q ss_pred EEeccccCccccCC-Ccccccc-cCCCCCEE---EeeccccC-Cccccccc---cCHHHHHhhcCC---cccccCCCChH
Q 013235 292 IADEVQAGFARTGS-HFWGFEA-HGVVPDIV---TMAKGIGN-GIPLGAVV---TTPEIAEVLTRR---NYFNTFGGNPV 359 (447)
Q Consensus 292 I~DEv~tGfgr~G~-~~~~~~~-~gv~pDiv---t~sK~lg~-G~pigav~---~~~~i~~~l~~~---~~~~T~~~np~ 359 (447)
++|=+|-||+.... .-++... ....|.++ .+||.+|= |-|+|+.. -+++.++.+... .--++|+..|-
T Consensus 209 ~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~ 288 (396)
T COG1448 209 FFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPA 288 (396)
T ss_pred eeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCch
Confidence 99999999975331 1122211 12234344 38899983 66666643 345554433221 11145554443
Q ss_pred HHHHHHHH------HHHH---hhhhHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeE
Q 013235 360 CTAAGHAV------LKVI---QKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (447)
Q Consensus 360 a~aaala~------L~~i---~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~ 411 (447)
--+...++ |+.. |-+++.+++.++.+.|.+.|++.....+.-.-...+|+|-
T Consensus 289 ~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFs 349 (396)
T COG1448 289 HGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFS 349 (396)
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceee
Confidence 22222222 2221 1124566677777777777777543322222234445543
No 359
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.24 E-value=0.00013 Score=73.67 Aligned_cols=285 Identities=15% Similarity=0.097 Sum_probs=144.9
Q ss_pred CHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCC--CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q 013235 117 HPY-VVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (447)
Q Consensus 117 ~p~-v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~--~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~ 193 (447)
+|. ..+|+.+++-...|.+..| .....+..+.|.+.+.. +.+.+++..|||.++|+++.-... .++.++++. +
T Consensus 15 ~~~~~~~~~~~~~~~~~HRs~~F-~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~-~~g~~vLv~-g- 90 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRSHRSKLG-KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG-CRGVDVLAW-E- 90 (374)
T ss_pred CchhhHHHHhhhhcccCcCCHHH-HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC-CCCCeEEEE-C-
Confidence 456 5666665544444533322 34556667777777753 345678899999999999975331 134566653 3
Q ss_pred cccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCC
Q 013235 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (447)
Q Consensus 194 yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~ 273 (447)
+.|.....-.+.. +.. ..+..+. .+|+...+ .++++. ...+..+..|+ ++|+..+
T Consensus 91 ~FG~r~~~eia~~---~g~----~~v~~l~------~~~g~~~~--~~~ve~------~~~v~~vhnET---STGv~np- 145 (374)
T TIGR01365 91 SFGKGWVTDVTKQ---LKL----PDVRVLE------AEYGKLPD--LKKVDF------KNDVVFTWNGT---TSGVRVP- 145 (374)
T ss_pred HHHHHHHHHHHHh---cCC----CCcEEEc------CCCCCCCC--HHHcCC------CCCEEEecCCC---chheecc-
Confidence 4344322111100 000 0122222 12322110 334431 12455555553 3466665
Q ss_pred CChHHHHHHHHHH-hCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCccccccccCHHHHHhhcCC--
Q 013235 274 PGYLPAVYKSIKK-AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRR-- 348 (447)
Q Consensus 274 ~~~l~~l~~l~~~-~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l~~~-- 348 (447)
++ +++++ +++++|+|=|-+ || | .-+-++ + .|+++.| |+|+.---+|.++.+++..+.....
T Consensus 146 ---v~---~i~~~~~~~lliVDavSs-~g--~-~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~ 211 (374)
T TIGR01365 146 ---NG---DFIPADREGLTICDATSA-AF--A-QDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTP 211 (374)
T ss_pred ---cc---ccccccCCCcEEEEccch-hc--C-CCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCC
Confidence 33 33333 589999998764 53 2 222223 2 6988776 9998421247788888776554320
Q ss_pred -----c---------------ccccCCCCh-HHHHHHHHHHHHHhhh-h---HHHHHHHHHHHHHHHHHHHHHhcCCee-
Q 013235 349 -----N---------------YFNTFGGNP-VCTAAGHAVLKVIQKD-K---LQNNAHVVGSYLKERLTALKDKYGIIG- 402 (447)
Q Consensus 349 -----~---------------~~~T~~~np-~a~aaala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~i~- 402 (447)
. ...|...+| .+..+.+.+|+.++++ + ..++.+++++.++++++++-- +....
T Consensus 212 y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~-l~~~~~ 290 (374)
T TIGR01365 212 AWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNW-IHFLAE 290 (374)
T ss_pred CCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCC-cccCCC
Confidence 0 012333333 3444556667777664 3 445566667777777776520 11121
Q ss_pred --eEeecceeEEEEEeeCCC---CCCCCHHHHHHHHHHHHhCCceeecc
Q 013235 403 --DVRGRGFLLGVEFVTDRQ---LKTPAKAETLYIMDKMKGICALFFSQ 446 (447)
Q Consensus 403 --~vrg~Gl~~giel~~~~~---~~~p~~~~~~~~~~~l~~~Gvlv~~~ 446 (447)
..|+.. .+.+.+..+.. ...|.-....++.+.|+++||.+..+
T Consensus 291 ~~~~rS~t-vt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G 338 (374)
T TIGR01365 291 TPEIRSNT-SVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIG 338 (374)
T ss_pred ChhhcCCC-eEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEecc
Confidence 133322 23344311100 00111112467899999999988643
No 360
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.22 E-value=0.0005 Score=69.61 Aligned_cols=228 Identities=18% Similarity=0.174 Sum_probs=121.7
Q ss_pred HHHHHHHHHhCCCC-------CceEEEcCCHHHHHHHHHHHHHhhc-------C----CCeEEEEcCCcccCchhhhhcc
Q 013235 144 ADFAEALASKMPGN-------LKVVFFTNSGTEANELAIMMARLYT-------G----CNDIISLRNAYHGNAAGTMGAT 205 (447)
Q Consensus 144 ~elae~L~~~~~~~-------~~~v~~~~sGseA~e~Aik~ar~~t-------~----~~~ii~~~~~yHG~~~~~~~~t 205 (447)
.++.+.|++++..+ ...-+|+++|||||..|+..||... + .+.+++....-|-+..-+....
T Consensus 82 ~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~l 161 (373)
T PF00282_consen 82 REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARIL 161 (373)
T ss_dssp HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHT
T ss_pred HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhccee
Confidence 34555566666433 1246799999999999999998642 1 2345666665675555554443
Q ss_pred CCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccC-CC-CeEEEEEccccCCCceeeCCCChHHHHHHH
Q 013235 206 AQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT-SG-HVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (447)
Q Consensus 206 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~-~~-~~aavi~Epi~~~gG~~~~~~~~l~~l~~l 283 (447)
+. ++..++..... .-| .++|++.+++.. .+ .+.+|+..--....|.+-+ +++|.++
T Consensus 162 Gl----------g~~~I~~~~~~----~md----~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i 219 (373)
T PF00282_consen 162 GL----------GVRKIPTDEDG----RMD----IEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADI 219 (373)
T ss_dssp TS----------EEEEE-BBTTS----SB-----HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHH
T ss_pred ee----------EEEEecCCcch----hhh----HHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhh
Confidence 32 34455432211 124 456666654321 22 3445555444444577766 9999999
Q ss_pred HHHhCCEEEEeccccCccccCCCcccccccCC-CCCEEEee--ccccCCccccccccCHH-HH-HhhcCC-cc-------
Q 013235 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE-IA-EVLTRR-NY------- 350 (447)
Q Consensus 284 ~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv-~pDivt~s--K~lg~G~pigav~~~~~-i~-~~l~~~-~~------- 350 (447)
|+++++.+-+|-++.|....- ...-.-..++ ..|=+++. |-++.-++.|.++.+.+ .. +.+... .+
T Consensus 220 ~~~~~~wlHVDaA~gg~~~~~-~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~ 298 (373)
T PF00282_consen 220 CEKYNIWLHVDAAYGGSALLS-PEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRE 298 (373)
T ss_dssp HHHCT-EEEEEETTGGGGGGH-CTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SS
T ss_pred ccccceeeeeccccccccccc-ccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccc
Confidence 999999999999998732211 1111111233 34777655 87776778888887653 32 223110 00
Q ss_pred --------cccCCCC-hHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHH
Q 013235 351 --------FNTFGGN-PVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTAL 394 (447)
Q Consensus 351 --------~~T~~~n-p~a~aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~~l 394 (447)
..|..+. .......-.+|+.+-.+++. ++..++.++|.+.|++.
T Consensus 299 ~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 299 SDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp S-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0223333 33333444556655555554 44445566666665554
No 361
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.15 E-value=7.5e-05 Score=75.80 Aligned_cols=229 Identities=15% Similarity=0.156 Sum_probs=122.1
Q ss_pred cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc-C
Q 013235 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV-Q 216 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~-~ 216 (447)
+...+.|..+..++.++. .+..|++|+.|.+|.+++..+.. ++++|+ ++...|=+...++.+++.. .|..+.. .
T Consensus 64 p~G~I~eAe~~aA~~fGA-d~t~flvnGsT~g~~a~i~a~~~--~gd~VL-v~RN~HkSv~~alil~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGA-DKTFFLVNGSTSGNQAMIMALCR--PGDKVL-VDRNCHKSVYNALILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTE-SEEEEESSHHHHHHHHHHHHHTT--TTCEEE-EETT--HHHHHHHHHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCC-CeEEEEecCchHHHHHHHHHhcC--CCCEEE-EcCCcHHHHHHHHHHcCCeEEEecCCccc
Confidence 345666777777777743 34455567777777777765432 445554 5555677777777776642 2222210 0
Q ss_pred CCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeE---EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA---GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a---avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
.|+..-..+.. + ..+.+++.+++. ++..+ +||+.|.. .|++.. +++|.++|++++++|++
T Consensus 140 ~gi~~~i~~~~----~------~~~~i~~~l~~~-p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llv 202 (417)
T PF01276_consen 140 YGIIGGISPDE----F------NEEDIEEALKEH-PDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLV 202 (417)
T ss_dssp TS-BEEB-GGG----G------SHHHHHHHHHHC-TTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEE
T ss_pred cCCccCCChhh----h------hHHHHHHHHHhC-ccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEE
Confidence 12211111100 0 036788888765 33334 77777743 467776 99999999999999999
Q ss_pred eccccCccccCCCcccccccCCCCC-------EEEee--ccccCCccccccc-cC-------HHHHHhhcCCcccccCCC
Q 013235 294 DEVQAGFARTGSHFWGFEAHGVVPD-------IVTMA--KGIGNGIPLGAVV-TT-------PEIAEVLTRRNYFNTFGG 356 (447)
Q Consensus 294 DEv~tGfgr~G~~~~~~~~~gv~pD-------ivt~s--K~lg~G~pigav~-~~-------~~i~~~l~~~~~~~T~~~ 356 (447)
||++.+.-.-. .+. -.....-.| ++|-| |.++ ++.-++++ .+ +.+.+.+. ...|-+-
T Consensus 203 DEAhGah~~F~-~lp-~~a~~~gad~~~~~~~~vvqS~HKtL~-altQts~lh~~~~~~v~~~~~~~~l~---~~~TTSP 276 (417)
T PF01276_consen 203 DEAHGAHFGFH-PLP-RSALALGADRPNDPGIIVVQSTHKTLP-ALTQTSMLHVKGDRIVDHERVNEALS---MHQTTSP 276 (417)
T ss_dssp E-TT-TTGGCS-GGG-TTCSSTTSS-CTSBEEEEEEEHHHHSS-S-TT-EEEEEETCCCTTHHHHHHHHH---HHS-SS-
T ss_pred EccccccccCC-CCc-cchhhccCccccccceeeeechhhccc-ccccceEEEecCCCcccHHHHHHHHH---HHcCCCh
Confidence 99986532111 111 123445567 88877 7765 23223322 22 22223222 2233333
Q ss_pred ChHHHHHHHHHHHHH-h--hhhHHHHHHHHHHHHHHHHHHH
Q 013235 357 NPVCTAAGHAVLKVI-Q--KDKLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 357 np~a~aaala~L~~i-~--~~~l~~~~~~~g~~l~~~L~~l 394 (447)
+=+-+|..-.+.+.+ . .+.+.+++.+....+|+.|+++
T Consensus 277 SY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 277 SYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp -HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 333333333444555 2 2357788888899999999763
No 362
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.12 E-value=0.00039 Score=69.31 Aligned_cols=260 Identities=20% Similarity=0.308 Sum_probs=159.7
Q ss_pred hHHHHHHHHHHHhCCCCCceEEE-cCCHHHHHHHHHHHHHhhc-----CCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 141 HAIADFAEALASKMPGNLKVVFF-TNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~-~~sGseA~e~Aik~ar~~t-----~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
..+.+|.+.|+++. +++.|-+ -|+|++.=-+.+.+.|.|. +.++++..-.|-||.-..+.++.+
T Consensus 109 ~li~~Lq~~L~~IT--G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G-------- 178 (496)
T COG1003 109 ELIYELQEWLKEIT--GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAG-------- 178 (496)
T ss_pred HHHHHHHHHHHHhc--CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcC--------
Confidence 45567888888887 4665544 6799998888888888873 235566667888998887776653
Q ss_pred cCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
+..+..+...++. .| +++|++.++ +++||+.+. .++.-|+.. +-+++|+++.+++|.+|..|
T Consensus 179 ----~~VV~V~~~~~G~--VD----lddLk~k~~----~~~AalMiT-nPsT~GvFE---~~I~ei~~ivH~~Gg~vY~D 240 (496)
T COG1003 179 ----FKVVVVKCDENGN--VD----LDDLRAKAE----DNLAALMIT-NPSTLGVFE---EDIREICEIVHEAGGQVYYD 240 (496)
T ss_pred ----ceEEEEecCCCCC--cc----HHHHHHHhc----cceeEEEec-cCcccccch---hhHHHHHHHHHHcCCEEEec
Confidence 3333322222221 23 677777665 467766554 223335443 34889999999999999999
Q ss_pred cc----ccCccccCCCcccccccCCCCCEE------EeeccccC-CccccccccCHHHHHhhcC----Cc----------
Q 013235 295 EV----QAGFARTGSHFWGFEAHGVVPDIV------TMAKGIGN-GIPLGAVVTTPEIAEVLTR----RN---------- 349 (447)
Q Consensus 295 Ev----~tGfgr~G~~~~~~~~~gv~pDiv------t~sK~lg~-G~pigav~~~~~i~~~l~~----~~---------- 349 (447)
-+ +.|..|-| .+ ++ ||+ ||+=.-|| |--.|-|..+++++..+.. ..
T Consensus 241 GANlNA~vG~~rPG-d~-G~-------DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~ 311 (496)
T COG1003 241 GANLNAIVGLARPG-DM-GF-------DVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDG 311 (496)
T ss_pred Ccchhhhhcccccc-cc-cc-------ceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCC
Confidence 75 66666666 22 22 554 55555555 4557777777777776653 10
Q ss_pred -----ccccCCCChHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCC-
Q 013235 350 -----YFNTFGGNPVCTAAGHAVLKVIQKDKLQN---NAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ- 420 (447)
Q Consensus 350 -----~~~T~~~np~a~aaala~L~~i~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~- 420 (447)
-..+|-||..-...+.+-+..+-.++|.+ .+--+.+|+..+|+. .|+++ ..+.. .+.-||+-+-.
T Consensus 312 ~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~--y~~~~-~~~HE~ild~r~ 385 (496)
T COG1003 312 KKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG---YYPVP--YTGEN-RVAHECILDARP 385 (496)
T ss_pred CccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh---cCccc--cCCCC-cceeEEEeechH
Confidence 12356667666666777777776665542 333456788877766 33332 23333 45566654321
Q ss_pred CCCCCHHHHHHHHHHHHhCCcee
Q 013235 421 LKTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 421 ~~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
.+......+..+++.|++.|+.-
T Consensus 386 l~~~~Gv~~~DvAKrLlD~GfHa 408 (496)
T COG1003 386 LKKETGVRALDVAKRLLDYGFHA 408 (496)
T ss_pred hHhhcCCcHHHHHHHHHhcCCCC
Confidence 11111223567999999999864
No 363
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.12 E-value=0.00036 Score=69.49 Aligned_cols=223 Identities=16% Similarity=0.131 Sum_probs=132.0
Q ss_pred CHHHHHHHHHHHHhcccccccc-----cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEc
Q 013235 117 HPYVVDSIVNQIKRIQHSTVLY-----LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLR 191 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~~~~~~~~-----~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~ 191 (447)
+|++++|+.+.+.....- ..+ ..+-..++++.++... +.+.+..+|.-+.|+.+.+-..-. ++..|+..-
T Consensus 40 ~~e~iea~~~~~~~~v~L-e~~l~~g~~~~R~~~~~~~~~~~~--~aea~~ivnnn~aAVll~~~al~~--~~EvVis~g 114 (395)
T COG1921 40 SPEAIEAMKEAMRAPVEL-ETDLKTGKRGARLTELAELLCGLT--GAEAAAIVNNNAAAVLLTLNALAE--GKEVVVSRG 114 (395)
T ss_pred CHHHHHHHHHHhccccee-eeecccchhhHHHHHHHHHHhccc--chhheeeECCcHHHHHHHHhhhcc--CCeEEEEcc
Confidence 588999888776653211 111 1122234555555443 235567778888888877752221 334444321
Q ss_pred C---CcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCc
Q 013235 192 N---AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGG 268 (447)
Q Consensus 192 ~---~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG 268 (447)
. ++|-.....+... |+..+..-+.- .....+++..|.... ....-+..+..+..|
T Consensus 115 ~lV~gg~~~v~d~~~~a------------G~~l~EvG~tn--------~t~~~d~~~AIne~t--a~llkV~s~~~~f~~ 172 (395)
T COG1921 115 ELVEGGAFRVPDIIRLA------------GAKLVEVGTTN--------RTHLKDYELAINENT--ALLLKVHSSNYGFTG 172 (395)
T ss_pred ccccCCCCChhHHHHHc------------CCEEEEecccC--------cCCHHHHHHHhccCC--eeEEEEeeccccccc
Confidence 1 3444444444333 33332221111 111567887776432 333445555556666
Q ss_pred eeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccc-cccCCCCCEEEee--ccccCCccccccccCHHHHHhh
Q 013235 269 IIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVL 345 (447)
Q Consensus 269 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~-~~~gv~pDivt~s--K~lg~G~pigav~~~~~i~~~l 345 (447)
.+. ++++.++|+++|+++|+|..-...-+ ..... +....-+|+|++| |-|+ |..-|.+++++++++.+
T Consensus 173 ~l~-----~~~l~~ia~~~~lpvivD~aSg~~v~---~e~~l~~~la~GaDLV~~SgdKllg-GPqaGii~GkKelI~~l 243 (395)
T COG1921 173 MLS-----EEELVEIAHEKGLPVIVDLASGALVD---KEPDLREALALGADLVSFSGDKLLG-GPQAGIIVGKKELIEKL 243 (395)
T ss_pred ccc-----HHHHHHHHHHcCCCEEEecCCccccc---cccchhHHHhcCCCEEEEecchhcC-CCccceEechHHHHHHH
Confidence 665 88999999999999999986421111 11222 2334568999998 7776 44567799999999988
Q ss_pred cCCcccccCCCChHHHHHHHHHHHHHhhhh
Q 013235 346 TRRNYFNTFGGNPVCTAAGHAVLKVIQKDK 375 (447)
Q Consensus 346 ~~~~~~~T~~~np~a~aaala~L~~i~~~~ 375 (447)
........+-..+...++-.++|+.....+
T Consensus 244 q~~~l~Ralrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 244 QSHPLKRALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred HhhhhhhhhhcCcHhHHHHHHHHHHHcCch
Confidence 765555556667888899899998876543
No 364
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.03 E-value=7.9e-06 Score=80.50 Aligned_cols=223 Identities=18% Similarity=0.175 Sum_probs=56.1
Q ss_pred ccCCCC--CHHHHHHHHHHHHhccc------ccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhc
Q 013235 111 VCCGHC--HPYVVDSIVNQIKRIQH------STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT 182 (447)
Q Consensus 111 ~~lGh~--~p~v~~A~~~~l~~~~~------~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t 182 (447)
.+||-+ ++++.+++.+.+..+.. ...+. .-+..+.+.|++.. +.+..+++|+...|+.+++.... .
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg--~R~~~v~~ll~~lt--gAeaA~VvNnnaAAv~L~l~~la--~ 84 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRG--SRYAHVEELLCELT--GAEAALVVNNNAAAVLLALNTLA--K 84 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccc--cccccccccccccc--ccccccccccccccccccccccc--c
Confidence 456644 46777777765544311 00111 11233445555555 34567788998888888776322 1
Q ss_pred CCCeEEEEcC-------CcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCe
Q 013235 183 GCNDIISLRN-------AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV 255 (447)
Q Consensus 183 ~~~~ii~~~~-------~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~ 255 (447)
+ ++||+-+| +|. ....+.. .|...+..= ......+++.++.|.. ++
T Consensus 85 ~-~EvIvsRGelVeiGgsFR--ip~vm~~------------sGa~lvEVG--------ttN~t~~~Dye~AI~e----~T 137 (367)
T PF03841_consen 85 G-KEVIVSRGELVEIGGSFR--IPDVMRQ------------SGARLVEVG--------TTNRTHLSDYEKAITE----NT 137 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-cccccccccccccccccc--ccccccc------------ccccccccc--------cccccccccccccccc----cc
Confidence 3 34443322 221 1111111 222222110 0011124566666642 34
Q ss_pred EEE-EEcc----ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC------ccccCCCcccccccCCCCCEEEee-
Q 013235 256 AGF-LSES----IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG------FARTGSHFWGFEAHGVVPDIVTMA- 323 (447)
Q Consensus 256 aav-i~Ep----i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG------fgr~G~~~~~~~~~gv~pDivt~s- 323 (447)
+++ -+-+ ++|-.+.+. ++++.+++++|++++|.|-.-.. +|-.+ +.-..+....-.|+||||
T Consensus 138 a~ll~Vh~Sn~~i~GFt~~~~-----~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~-Ep~v~~~~~~GaDlV~fSG 211 (367)
T PF03841_consen 138 AALLKVHTSNFRIQGFTGEVS-----LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPD-EPTVQEYLAAGADLVTFSG 211 (367)
T ss_dssp ----------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-SEEEEET
T ss_pred ccccccccccccccccccccc-----HHHHHHHHhhcCCcEEEECCCCCCcCcccccCcc-ccHHHHHhhcCCCEEEEEC
Confidence 443 4543 233233333 89999999999999999965311 12111 111112233457999998
Q ss_pred -ccccCCccccccccCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh
Q 013235 324 -KGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (447)
Q Consensus 324 -K~lg~G~pigav~~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~ 373 (447)
|-||| --.|.+++++++++.+......-.+-.+.+..++-.++|+...+
T Consensus 212 dKlLGG-PQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~ 261 (367)
T PF03841_consen 212 DKLLGG-PQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLD 261 (367)
T ss_dssp TSSSSS--S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---
T ss_pred CCcCCC-CCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHH
Confidence 87775 33578999999999987655556666788999999999987653
No 365
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.00 E-value=0.0015 Score=73.31 Aligned_cols=276 Identities=14% Similarity=0.119 Sum_probs=146.0
Q ss_pred CCHHHHHHHHHHHHhccccccccc------chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcC-CCeEE
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYL------NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG-CNDII 188 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~------~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~-~~~ii 188 (447)
-++.|.+++.+....+...+...+ -..+.++...++++++-+..++-+..++|.+.|+++...+...+ +++|+
T Consensus 117 ~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~Vl 196 (993)
T PLN02414 117 VPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFL 196 (993)
T ss_pred CCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEE
Confidence 455555888776654422222111 12345777888888876667788999999999977754443223 35666
Q ss_pred EEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCc
Q 013235 189 SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGG 268 (447)
Q Consensus 189 ~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG 268 (447)
+.+..| ..+...+..- ....|+..+..|.. ... . ..+.+++++ -.+.+..|
T Consensus 197 Vs~~~h-P~~~~v~~t~--------a~~~GieV~~v~~~--------------~~~----~-~~~~v~~vl-vq~P~~~G 247 (993)
T PLN02414 197 IASNCH-PQTIDVCQTR--------ADGLGLEVVVADEK--------------DFD----Y-SSGDVCGVL-VQYPATDG 247 (993)
T ss_pred EcCccC-HhHHHHHHHh--------hhhcCCEEEEecch--------------hhc----c-ccCceEEEE-EecCCCCe
Confidence 655555 4443333110 01124433322210 000 0 122566665 34555678
Q ss_pred eeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEe-ecccc-----CCccccccccCHHHH
Q 013235 269 IIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM-AKGIG-----NGIPLGAVVTTPEIA 342 (447)
Q Consensus 269 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~-sK~lg-----~G~pigav~~~~~i~ 342 (447)
.+.+ +++|.++|+++|+++|+ -++ .++-++ +-....+ -.||++. +..++ ||-..|++.+++++.
T Consensus 248 ~v~d----v~~I~~~ah~~GaL~iV-aad-~lal~~--l~~pge~--GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~ 317 (993)
T PLN02414 248 EVLD----YAEFVKNAHANGVKVVM-ATD-LLALTM--LKPPGEW--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYK 317 (993)
T ss_pred EEcC----HHHHHHHHHHcCCEEEE-EEC-HHHhcC--CCCHhhc--cCcEEEECCCccccCCCCCCCCeeEEEECHHHH
Confidence 8877 99999999999999999 322 232222 1111223 3488763 23333 454478888888887
Q ss_pred HhhcCCc--c-----c-----------------ccCCCChHHHHHHHHHHH-----HHhhh---hHHHHHHHHHHHHHHH
Q 013235 343 EVLTRRN--Y-----F-----------------NTFGGNPVCTAAGHAVLK-----VIQKD---KLQNNAHVVGSYLKER 390 (447)
Q Consensus 343 ~~l~~~~--~-----~-----------------~T~~~np~a~aaala~L~-----~i~~~---~l~~~~~~~g~~l~~~ 390 (447)
..+.... . + -....|..+..+..+.+. .+-.. +..+++.++..+++++
T Consensus 318 r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~ 397 (993)
T PLN02414 318 RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAG 397 (993)
T ss_pred hhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 7554210 0 0 011223322222223332 11122 3457788888888888
Q ss_pred HHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceeec
Q 013235 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 391 L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
|.++ .+..... +--+ .+.|.+ +. ..++.+.|.++||.++.
T Consensus 398 L~~~--G~~~~~~-~~f~-~vt~~~--------~~---~~~v~~~L~~~gI~l~~ 437 (993)
T PLN02414 398 LKKL--GFQVQSL-PFFD-TVKVKC--------SD---ADAIADAAAKVGINLRV 437 (993)
T ss_pred Hhhc--CCccCCC-CCcC-eEEEec--------CC---HHHHHHHHHHCCCeeEE
Confidence 8654 2332222 1111 112222 11 25688999999997753
No 366
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.97 E-value=0.00088 Score=75.21 Aligned_cols=247 Identities=13% Similarity=0.110 Sum_probs=134.0
Q ss_pred HHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCC--CeEEEEcCCcccCchhhhhccCCCCccccccCCCeE
Q 013235 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC--NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH 220 (447)
Q Consensus 143 ~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~--~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~ 220 (447)
+.++-..++++++-+..++-+..++|.+.|+++...+ ++++ ++|++.+..| ..+...+... ....|+.
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~h-P~~~~v~~t~--------a~~~G~e 192 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR-VSKSKSNRFFVDDDVH-PQTLDVLRTR--------AEPLGIE 192 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh-hccCCCCEEEEcCccC-HHHHHHHHHH--------HHhCCCE
Confidence 4567777888886666677889999999996665434 4442 6777766655 3333222110 0112444
Q ss_pred eecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCc
Q 013235 221 HALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300 (447)
Q Consensus 221 ~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGf 300 (447)
.+..|.. .| ++ .++++++ +-.+++..|.+.+ +++|.++|+++|+++++|=.+...
T Consensus 193 v~~~~~~------~d-------~~-------~~~~~~v-lvq~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al 247 (954)
T PRK05367 193 VVVGDAA------KA-------LD-------HDDVFGV-LLQYPGTSGEVRD----YTALIAAAHARGALVAVAADLLAL 247 (954)
T ss_pred EEEecCc------cC-------CC-------cccEEEE-EEecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhc
Confidence 3332211 01 10 2356665 4445677888886 999999999999999999755322
Q ss_pred cccCCCcccccccCCCCCEEEe-----ecccc-CCccccccccCHHHHHhhcCCccc--ccCCC----------------
Q 013235 301 ARTGSHFWGFEAHGVVPDIVTM-----AKGIG-NGIPLGAVVTTPEIAEVLTRRNYF--NTFGG---------------- 356 (447)
Q Consensus 301 gr~G~~~~~~~~~gv~pDivt~-----sK~lg-~G~pigav~~~~~i~~~l~~~~~~--~T~~~---------------- 356 (447)
+- + . ....+| .||++. +=.+| ||--.|++.+++++.+.+.....+ ....|
T Consensus 248 ~~-l-~--~pge~G--aDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiR 321 (954)
T PRK05367 248 TL-L-T--PPGEMG--ADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIR 321 (954)
T ss_pred cC-C-C--ChhhcC--CCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccc
Confidence 11 1 0 112223 388763 32233 333377888899888777542111 00001
Q ss_pred ------C---hHHHHHHHHH--HHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCC
Q 013235 357 ------N---PVCTAAGHAV--LKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK 422 (447)
Q Consensus 357 ------n---p~a~aaala~--L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~ 422 (447)
| ..+..+.++. +..+..+ ++.+++..+..++.++|++. .+..... ..+--+.+.-
T Consensus 322 rekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~--G~~~~~~----~~f~~~~~~~----- 390 (954)
T PRK05367 322 REKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL--GLEVVHD----SFFDTLTVEV----- 390 (954)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc--CcccCCC----CCCCeEEEeC-----
Confidence 1 1112222222 2333343 34567777888888888653 3332222 1111111111
Q ss_pred CCCHHHHHHHHHHHHhCCceee
Q 013235 423 TPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 423 ~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+ ..+.++.+.|+++||.++
T Consensus 391 -~--~~~~~i~~~l~~~gi~~~ 409 (954)
T PRK05367 391 -G--GDAAAVLARALAAGINLR 409 (954)
T ss_pred -C--CCHHHHHHHHHHCCceec
Confidence 1 014679999999999874
No 367
>PRK15029 arginine decarboxylase; Provisional
Probab=97.94 E-value=0.0011 Score=72.31 Aligned_cols=231 Identities=11% Similarity=0.074 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc-CCCe
Q 013235 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV-QTGV 219 (447)
Q Consensus 142 ~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~-~~g~ 219 (447)
.+.+..+..++.++. .+..|.+|+-|.+|.+++..+. ++.+.|.++...|=+...++.+++.. .|..+.. ..|+
T Consensus 206 ~I~eAq~~aA~~fgA-~~t~FlvNGST~gn~a~i~a~~---~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 206 AFGESEKYAARVFGA-DRSWSVVVGTSGSNRTIMQACM---TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred HHHHHHHHHHHHhCC-CcEEEEeCChhHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 444554555555643 3556667777777776665433 33444556666687878888777643 2222110 0111
Q ss_pred EeecCCCCcCCCCCCChHHH-HHHHHHHHHccCCC-------C-eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCE
Q 013235 220 HHALNPDPYRGVFGADGEMY-AKDVQDLIDFGTSG-------H-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290 (447)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~-~~~le~~i~~~~~~-------~-~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~l 290 (447)
..- .+...+ .+.+++.+++. |+ + .++||+.|.. .|++.. +++|.++|+++|++
T Consensus 282 ~~~-----------i~~~~~~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~ 343 (755)
T PRK15029 282 IGP-----------IYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDR 343 (755)
T ss_pred ccC-----------CCccccCHHHHHHHHHhC-chhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCe
Confidence 100 010000 35666666543 21 1 2566666633 356665 89999999999999
Q ss_pred EEEeccccCccccCCCc---ccccc--cC-CCCC-EEEee--ccccCCccccccc-cCHH---HH-HhhcCC-cccccCC
Q 013235 291 CIADEVQAGFARTGSHF---WGFEA--HG-VVPD-IVTMA--KGIGNGIPLGAVV-TTPE---IA-EVLTRR-NYFNTFG 355 (447)
Q Consensus 291 lI~DEv~tGfgr~G~~~---~~~~~--~g-v~pD-ivt~s--K~lg~G~pigav~-~~~~---i~-~~l~~~-~~~~T~~ 355 (447)
|++||++.+.-+-.+.+ .+.+. .. .-+| ++|-| |.+++ +..++++ .+.. +- +.+... ....|.+
T Consensus 344 llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~~l~~~qSTS 422 (755)
T PRK15029 344 LHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQAYMMHATTS 422 (755)
T ss_pred EEEECccccccccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHHHHHHHcCCC
Confidence 99999986643222111 11110 01 3378 77655 76652 3333332 2111 11 122211 1122223
Q ss_pred CChHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHH
Q 013235 356 GNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALK 395 (447)
Q Consensus 356 ~np~a~aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~ 395 (447)
-+=+-+|..-.+.+.++. +++.+.+.+....+|+.+.++.
T Consensus 423 PSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 423 PLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred cHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 222222222233334442 3466777778888888887764
No 368
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=97.88 E-value=0.005 Score=59.45 Aligned_cols=293 Identities=16% Similarity=0.131 Sum_probs=153.2
Q ss_pred EecCCCeEEEecCCcccccCCCCCHHHHHHHHHHH-Hhccccc-cccc--chH----HHHHHHHHHHhCCCCCceEEEcC
Q 013235 94 FDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHST-VLYL--NHA----IADFAEALASKMPGNLKVVFFTN 165 (447)
Q Consensus 94 ~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l-~~~~~~~-~~~~--~~~----~~elae~L~~~~~~~~~~v~~~~ 165 (447)
-+.+|-.|||- ++||-.++++.+..++.. +.-.+.. .... ... -..|..+|+.+.+....+|..++
T Consensus 27 ~lp~~viyLdg------nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~d 100 (407)
T COG3844 27 ALPGGVIYLDG------NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTD 100 (407)
T ss_pred cCCCCeEEeec------cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeC
Confidence 35677789984 467843335555444322 2211100 0001 122 23456666666665666777888
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCcc-cCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHH
Q 013235 166 SGTEANELAIMMARLYTGCNDIISLRNAYH-GNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQ 244 (447)
Q Consensus 166 sGseA~e~Aik~ar~~t~~~~ii~~~~~yH-G~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le 244 (447)
|-|--+.-.+-.+...+.++.+|++++.-. -...-+..+....... ..+..+. + .++++
T Consensus 101 tts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~-----------~----P~~~~ 160 (407)
T COG3844 101 TTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGVI-----------A----PRALE 160 (407)
T ss_pred CcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceeee-----------C----hHHHH
Confidence 777555555555544444556666655432 1111111111000000 0011111 1 23555
Q ss_pred HHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEE--Ee
Q 013235 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TM 322 (447)
Q Consensus 245 ~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~ 322 (447)
+.+. +++|.|++..|+--+|.... +.+|-+++++||++++.|=+++ .| -...+.++--.|.. |-
T Consensus 161 ~~~~----dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs----aG--avp~~Lh~~gaDfaigcs 226 (407)
T COG3844 161 EAIT----DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS----AG--AVPVDLHAAGADFAIGCS 226 (407)
T ss_pred Hhhc----cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc----cC--CcceeecccCCCeeeeee
Confidence 5553 58999999999999998887 9999999999999999999987 23 22334444445655 44
Q ss_pred eccccCC--ccccccccCHHHHHhhcC--------------------CcccccC-CCC-h-HHHHHHHHHHHHHhhhh--
Q 013235 323 AKGIGNG--IPLGAVVTTPEIAEVLTR--------------------RNYFNTF-GGN-P-VCTAAGHAVLKVIQKDK-- 375 (447)
Q Consensus 323 sK~lg~G--~pigav~~~~~i~~~l~~--------------------~~~~~T~-~~n-p-~a~aaala~L~~i~~~~-- 375 (447)
=|-|.+| -|-+..+.++ ..+...+ ..+..-| .|+ | +++++...+||+..+-+
T Consensus 227 yKYLNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~ 305 (407)
T COG3844 227 YKYLNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDIT 305 (407)
T ss_pred ceeccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHH
Confidence 4777654 4444444332 2221111 0111011 122 3 44445556788765543
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCC---------CCCCHHHHHHHHHHHHhCCcee
Q 013235 376 -LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL---------KTPAKAETLYIMDKMKGICALF 443 (447)
Q Consensus 376 -l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~---------~~p~~~~~~~~~~~l~~~Gvlv 443 (447)
+.++...+..++.+-++.....+ ++++..+... ..| ...++++.|.++||+.
T Consensus 306 ~lR~kSlaLTd~fieLvEa~~~~~-------------~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~rGVig 367 (407)
T COG3844 306 ELRKKSLALTDYFIELVEARCEYY-------------GLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDRGVIG 367 (407)
T ss_pred HHHHhhhHHHHHHHHHHHhccccC-------------CcEEeccchhhhccceeeEecC---cHHHHHHHHHHcCccc
Confidence 44555555566665555554433 2333322210 012 2568999999999975
No 369
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.68 E-value=0.0085 Score=58.59 Aligned_cols=287 Identities=19% Similarity=0.235 Sum_probs=148.8
Q ss_pred CCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHH
Q 013235 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Ai 175 (447)
.+..|||+.+-.++..+- .+-..|+ -.... .| -+..+..|++...+.+ +.+.++-+.-|--|=..-+
T Consensus 44 Sedv~IDLLTDSGTgams---~~qwaam----m~GDE---AYagsrs~~~L~~avkdif--Gfq~~iPthQGRgAE~Il~ 111 (471)
T COG3033 44 SEDVFIDLLTDSGTGAMT---DKQWAAM----MRGDE---AYAGSRSYYALADAVKDIF--GFQYTIPTHQGRGAENILI 111 (471)
T ss_pred ccceEEEeeccCCccccc---HHHHHHH----hccch---hhcccccHHHHHHHHHHhc--CceeeeeccCCccHHHHHH
Confidence 456899998655543222 2222222 22111 12 2456678999999998 4777877776655544333
Q ss_pred HHHHh---hcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCC
Q 013235 176 MMARL---YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252 (447)
Q Consensus 176 k~ar~---~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~ 252 (447)
.+.+. +-+..++++|.+.|.-.|.+-....+.-. .+.+..+........|+.+.+ | ++.|+++|+..+.
T Consensus 112 ~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~--~n~~~~ea~d~~~~~pFKGd~--D----~~kLe~lidevG~ 183 (471)
T COG3033 112 PILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATP--RNVYVDEAFDTEVKYPFKGNF--D----LEKLERLIDEVGA 183 (471)
T ss_pred HHHhhhccccCCccccccccceecchhHHHHhcCCcc--ccccccccccccccCCCCCcc--C----HHHHHHHHHHhCc
Confidence 33322 22346777787777655554443322110 111111111111122333333 2 7889999998777
Q ss_pred CCeEEEEEcc-ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC----cc--c-cCCCccccccc--C--CCCCEE
Q 013235 253 GHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG----FA--R-TGSHFWGFEAH--G--VVPDIV 320 (447)
Q Consensus 253 ~~~aavi~Ep-i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG----fg--r-~G~~~~~~~~~--g--v~pDiv 320 (447)
+++.-|++-- ++..|| .+.+-.-+++++++|++||+.++.|-+... |- | -|-+-|.++.- . -..|-.
T Consensus 184 ~nvp~I~~tiT~NsagG-QpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~ 262 (471)
T COG3033 184 DNVPYIVLTITNNSAGG-QPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGC 262 (471)
T ss_pred ccCcEEEEEEeccccCC-CcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhh
Confidence 7776655554 444444 566788899999999999999999976421 10 0 11111222110 0 024666
Q ss_pred Eee-ccccCC-ccccccc-cCHH----HHHhhcCC----cccccCCC----ChHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 013235 321 TMA-KGIGNG-IPLGAVV-TTPE----IAEVLTRR----NYFNTFGG----NPVCTAAGHAVLKVIQKDKLQNNAHVVGS 385 (447)
Q Consensus 321 t~s-K~lg~G-~pigav~-~~~~----i~~~l~~~----~~~~T~~~----np~a~aaala~L~~i~~~~l~~~~~~~g~ 385 (447)
+|| |-= | .++|..+ .+.+ +...+... ..+.||+| +.-++|++ |..--+.+++++--...+
T Consensus 263 ~mS~KKD--~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvG---L~e~~~~~yl~~Rv~Qv~ 337 (471)
T COG3033 263 TMSAKKD--GLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVG---LREGVNFDYLAHRVAQVQ 337 (471)
T ss_pred eeecccc--ceeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHH---HHHhcCcHHHHHHHHHHH
Confidence 665 321 2 2444444 4443 33333321 13467765 33344443 433334455544444567
Q ss_pred HHHHHHHHHHHhcCCeeeEeecceeE
Q 013235 386 YLKERLTALKDKYGIIGDVRGRGFLL 411 (447)
Q Consensus 386 ~l~~~L~~l~~~~~~i~~vrg~Gl~~ 411 (447)
||-++|.+. .-+++..+-|.+.++
T Consensus 338 YL~~~l~~~--GVpi~~paGGHavfv 361 (471)
T COG3033 338 YLADGLEEA--GVPIVQPAGGHAVFV 361 (471)
T ss_pred HHHHHHHhc--CCeeEecCCCceEEe
Confidence 888888776 334445555555443
No 370
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.36 E-value=0.062 Score=57.63 Aligned_cols=151 Identities=17% Similarity=0.191 Sum_probs=82.2
Q ss_pred HHHHHHHHHcc--CCCCeEEEEEccccCCCceeeCCCChHHHHHHHH---HHhCC--EEEEeccccCcccc---CC--Cc
Q 013235 240 AKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSI---KKAGG--LCIADEVQAGFART---GS--HF 307 (447)
Q Consensus 240 ~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~---~~~g~--llI~DEv~tGfgr~---G~--~~ 307 (447)
.++|++.|++. ....+.+|+.---..+.|.+-| +++|.++| +++|+ .+-+|-++.|+.+. .. .+
T Consensus 262 ~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~ 337 (608)
T TIGR03811 262 INELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNF 337 (608)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccc
Confidence 45566555432 1224555555433334466666 99999998 77897 59999999887421 00 00
Q ss_pred cc-------------c-------------cccCC-CCCEEEee--ccccCCccccccccCH-HHHHhhcCC-ccc-----
Q 013235 308 WG-------------F-------------EAHGV-VPDIVTMA--KGIGNGIPLGAVVTTP-EIAEVLTRR-NYF----- 351 (447)
Q Consensus 308 ~~-------------~-------------~~~gv-~pDivt~s--K~lg~G~pigav~~~~-~i~~~l~~~-~~~----- 351 (447)
-. + ...++ ..|=||+- |.+.--++.|+++.+. ++.+.+... .+.
T Consensus 338 ~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~ 417 (608)
T TIGR03811 338 IPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGA 417 (608)
T ss_pred cccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccc
Confidence 00 0 00123 35666654 6655557788777764 444433221 000
Q ss_pred --------ccCCCChH--HHHHHHHHHHHH--hhh---hHHHHHHHHHHHHHHHHHHH
Q 013235 352 --------NTFGGNPV--CTAAGHAVLKVI--QKD---KLQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 352 --------~T~~~np~--a~aaala~L~~i--~~~---~l~~~~~~~g~~l~~~L~~l 394 (447)
++..|... ..++.-.+++.+ -.+ ++.++.-+..+++.+.|++.
T Consensus 418 ~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 418 DIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred cCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12233322 233444566666 333 35667777788888887774
No 371
>PRK13578 ornithine decarboxylase; Provisional
Probab=97.30 E-value=0.014 Score=63.24 Aligned_cols=165 Identities=13% Similarity=0.073 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchh-hhhccCCC-Ccccccc-CC
Q 013235 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAG-TMGATAQS-NWKFNVV-QT 217 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~-~~~~t~~~-~~~~~~~-~~ 217 (447)
..+.+..+..++.++. .+..|++|+-|.+|.+++..+. ++.+.|.++-..|=+... ++.+++.. .|..+.. ..
T Consensus 174 G~i~eAq~~AA~~fgA-d~tyFlvNGTS~gn~a~i~a~~---~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 174 GAAKDAQKHAAKVFNA-DKTYFVLNGTSASNKVVTNALL---TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPF 249 (720)
T ss_pred hHHHHHHHHHHHHhCC-CceEEEeCChhHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccccc
Confidence 3445555555555643 3456667777777777776433 334445566666766554 36666532 2222110 01
Q ss_pred CeEeecCCCCcCCCCCCChHHH-HHHHHHHHHccCCC-------CeEEEEEccccCCCceeeCCCChHHHHHHH-HHHhC
Q 013235 218 GVHHALNPDPYRGVFGADGEMY-AKDVQDLIDFGTSG-------HVAGFLSESIQGVGGIIELAPGYLPAVYKS-IKKAG 288 (447)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~-~~~le~~i~~~~~~-------~~aavi~Epi~~~gG~~~~~~~~l~~l~~l-~~~~g 288 (447)
|+.. +.+.+.+ .+.+++.|++..++ -.++||..|.. .|++.. +++|.++ |++++
T Consensus 250 Gi~g-----------~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~ 312 (720)
T PRK13578 250 GFIG-----------GIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD 312 (720)
T ss_pred CCcC-----------CCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC
Confidence 1110 0121111 24466666654222 24567766633 466665 8899998 67778
Q ss_pred CEEEEeccccCccccCCCcccc--cccCCCCC----EEEee--cccc
Q 013235 289 GLCIADEVQAGFARTGSHFWGF--EAHGVVPD----IVTMA--KGIG 327 (447)
Q Consensus 289 ~llI~DEv~tGfgr~G~~~~~~--~~~gv~pD----ivt~s--K~lg 327 (447)
.|++||++.+.-+-.+.+-.+ .....-+| ++|=| |-++
T Consensus 313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~ 358 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA 358 (720)
T ss_pred -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch
Confidence 999999986643222110001 11234567 77766 6665
No 372
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.26 E-value=0.19 Score=50.61 Aligned_cols=168 Identities=21% Similarity=0.283 Sum_probs=92.8
Q ss_pred HHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecC
Q 013235 145 DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALN 224 (447)
Q Consensus 145 elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~ 224 (447)
++-..++++.+-+.-+.=....+|.+-|+++..-|....+.+-+.....-|=.+...+..-. ...|+..+..
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra--------~~~g~~i~~~ 195 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRA--------EGLGIEIEVV 195 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhc--------ccCceEEEEe
Confidence 34445556653222233344567766666665445433333444555666655544443211 1124544432
Q ss_pred CCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE--eccccCc-c
Q 013235 225 PDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA--DEVQAGF-A 301 (447)
Q Consensus 225 p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~--DEv~tGf-g 301 (447)
+. .| ++++++. . .+++++++++-....|+.+.. +++|.+.++++|+++|+ |=+--++ -
T Consensus 196 ~~-------~d----~~~l~~~-~---~~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~LL~ 256 (450)
T COG0403 196 DA-------DD----LDDLESA-D---DGDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGLLK 256 (450)
T ss_pred cc-------ch----hhhhhhc-c---ccCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhccC
Confidence 21 11 4455544 2 348899999865544434443 89999999999998874 4433222 1
Q ss_pred ccCCCcccccccCCCCCEEE-----eecccc-CCccccccccCHHHHHhhcCC
Q 013235 302 RTGSHFWGFEAHGVVPDIVT-----MAKGIG-NGIPLGAVVTTPEIAEVLTRR 348 (447)
Q Consensus 302 r~G~~~~~~~~~gv~pDivt-----~sK~lg-~G~pigav~~~~~i~~~l~~~ 348 (447)
.-| + + -.||++ ||=.++ ||--.|+..++++....+..+
T Consensus 257 pPG-e------~--GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGR 300 (450)
T COG0403 257 PPG-E------F--GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGR 300 (450)
T ss_pred Ccc-c------c--CCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCc
Confidence 112 1 1 238875 777777 666678888888888776543
No 373
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.16 E-value=0.02 Score=58.44 Aligned_cols=210 Identities=19% Similarity=0.271 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhCCCCCceE--EEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe
Q 013235 142 AIADFAEALASKMPGNLKVV--FFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (447)
Q Consensus 142 ~~~elae~L~~~~~~~~~~v--~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~ 219 (447)
.+-|+-..++++. +++.+ =+...++.+-|+++...|...++.+.+....+-|..+...+..... ..++
T Consensus 111 ~lfe~Qs~i~eLT--GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~--------~~g~ 180 (429)
T PF02347_consen 111 ALFEYQSMICELT--GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAA--------PLGI 180 (429)
T ss_dssp HHHHHHHHHHHHH--TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCC--------HCCE
T ss_pred HHHHHHHHHHHhh--CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhh--------hCCe
Confidence 4457888888887 45632 4456677677765544454333323444556667666554432211 1245
Q ss_pred EeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc---
Q 013235 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV--- 296 (447)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv--- 296 (447)
..+..|....+ .+ + .+++|+|++.-.+ .-|.+.. +++|.++++++|+++|+ -+
T Consensus 181 ~iv~~~~~~~~---~~-----d----------~~~~a~v~vq~Pn-~~G~~ed----~~~i~~~~h~~gal~~~-~ad~~ 236 (429)
T PF02347_consen 181 EIVEVPLDEDG---TT-----D----------DDDTAAVMVQNPN-TFGVFED----IKEIADIAHAAGALVIV-GADPN 236 (429)
T ss_dssp EEEEE-BBTTC---SB----------------STTEEEEEEESS--TTSB--T----HHHHHHHHHHTT-EEEE-CGGCC
T ss_pred EEEEecccccC---Cc-----c----------ccCeEEEEeecCC-CCceEee----HHHHHHHHHHcCCEEEE-ecCHH
Confidence 54443321111 00 1 3488999887433 3456554 99999999999999986 22
Q ss_pred -ccCccccCCCcccccccCCCCCEEE-eecccc-----CCccccccccCHHHHHhhcCCc--------------------
Q 013235 297 -QAGFARTGSHFWGFEAHGVVPDIVT-MAKGIG-----NGIPLGAVVTTPEIAEVLTRRN-------------------- 349 (447)
Q Consensus 297 -~tGfgr~G~~~~~~~~~gv~pDivt-~sK~lg-----~G~pigav~~~~~i~~~l~~~~-------------------- 349 (447)
.+++-+-| .+| .||++ .+|.+| ||--.|++.++++++..+..+.
T Consensus 237 aL~~l~~Pg-------e~G--ADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtR 307 (429)
T PF02347_consen 237 ALGGLKSPG-------EYG--ADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTR 307 (429)
T ss_dssp GCCTC--GG-------GGT---SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGG
T ss_pred HHhCcCChh-------hcC--ccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccc
Confidence 11222222 233 38885 456665 3445788888888877765431
Q ss_pred --c------cccCCCChHHHH-HHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHH
Q 013235 350 --Y------FNTFGGNPVCTA-AGHAVLKVIQKDK---LQNNAHVVGSYLKERLTAL 394 (447)
Q Consensus 350 --~------~~T~~~np~a~a-aala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l 394 (447)
| .+-++.|..-+| ++..-+..+=.++ +.+++..+..|+.++|.++
T Consensus 308 EQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 308 EQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp TCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred cccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 122333433333 2333344343444 4566777788888888775
No 374
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.14 E-value=0.1 Score=58.32 Aligned_cols=250 Identities=14% Similarity=0.121 Sum_probs=127.8
Q ss_pred HHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEe
Q 013235 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG-CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHH 221 (447)
Q Consensus 143 ~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~-~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~ 221 (447)
+-++-..++++++-+..++-+...+|.+-|++++..|...+ +++|++. .+-|=.+...+... ....|+..
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~-~~~hP~~~~v~~t~--------a~~~g~~v 181 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVA-KDLHPQTKSVLHTR--------AKPFGIEV 181 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEEC-CCCCcchHHHHHHH--------HHhcCcEE
Confidence 45677778888743333446677888888855554333222 2565554 44443332222110 01124433
Q ss_pred ecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcc
Q 013235 222 ALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301 (447)
Q Consensus 222 ~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfg 301 (447)
+.. | .++|++.+ +++++++. .++..|.+.. +++|.++++++|+++|++--...++
T Consensus 182 ~~~----------~----~~~l~~~~------~~~~v~~q-~Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ 236 (939)
T TIGR00461 182 IVV----------D----CSDIKKAV------DVFGCLLQ-YPATDGSILD----YKQLIDALHSHKSLVSVAADLMALT 236 (939)
T ss_pred EEE----------c----HHHHhhcC------CEEEEEEE-CCCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhC
Confidence 321 1 23344332 45666553 3445677764 8999999999999999865443221
Q ss_pred ccCCCcccccccCCCCCEEE-eecccc-----CCccccccccCHHHHHhhcCCccc---------------cc-------
Q 013235 302 RTGSHFWGFEAHGVVPDIVT-MAKGIG-----NGIPLGAVVTTPEIAEVLTRRNYF---------------NT------- 353 (447)
Q Consensus 302 r~G~~~~~~~~~gv~pDivt-~sK~lg-----~G~pigav~~~~~i~~~l~~~~~~---------------~T------- 353 (447)
-.- .-..+| .||++ .+|.+| ||--.|++.+++++...+..+..+ .|
T Consensus 237 ll~----~Pge~G--aDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrR 310 (939)
T TIGR00461 237 LLT----PPGHYG--ADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRR 310 (939)
T ss_pred CcC----CHHHcC--CcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccc
Confidence 110 011223 38874 235444 343377888888888776542110 00
Q ss_pred -CCCChHHHHHHHH----H--HHHHhhhhH---HHHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCC
Q 013235 354 -FGGNPVCTAAGHA----V--LKVIQKDKL---QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT 423 (447)
Q Consensus 354 -~~~np~a~aaala----~--L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~ 423 (447)
-+.+.++.+.++- + +..+-.+++ .+++..+..+|.++|.+. .+..+.+ -.|--+.+.-+.
T Consensus 311 ekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~--G~~~~~~----~fF~~~~v~~~~---- 380 (939)
T TIGR00461 311 DKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND--PHELINK----TWFDTLTVKVGN---- 380 (939)
T ss_pred cccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC--CCcccCC----CccceEEEEeCC----
Confidence 0111222222221 1 333434433 456777778888888773 3333222 122122221110
Q ss_pred CCHHHHHHHHHHHHhCCceeec
Q 013235 424 PAKAETLYIMDKMKGICALFFS 445 (447)
Q Consensus 424 p~~~~~~~~~~~l~~~Gvlv~~ 445 (447)
..+.++.+.+.++||.++.
T Consensus 381 ---~~~~~i~~~~~~~gi~l~~ 399 (939)
T TIGR00461 381 ---GISSELLKAAEEFNINLRA 399 (939)
T ss_pred ---CCHHHHHHHHHHCCCeeee
Confidence 0146789999999998763
No 375
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.10 E-value=0.039 Score=54.53 Aligned_cols=207 Identities=17% Similarity=0.162 Sum_probs=110.0
Q ss_pred CCHHHHHHHHHHHHhccc---ccc-cccchHHHHHHHHHHHhCCCCCceEEE---cCCHHHHHHHHHHHHHhhcCCCeEE
Q 013235 116 CHPYVVDSIVNQIKRIQH---STV-LYLNHAIADFAEALASKMPGNLKVVFF---TNSGTEANELAIMMARLYTGCNDII 188 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~---~~~-~~~~~~~~elae~L~~~~~~~~~~v~~---~~sGseA~e~Aik~ar~~t~~~~ii 188 (447)
|+.+|.+|.++.=-.-.| ++. .|.+..+..|.+-.++.+.. +..++ .-|||.|+..|+.-... +.++++
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfga--E~ALVRpq~vSGTHAi~~~Lfg~Lr--pGD~ll 100 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGA--EDALVRPQFVSGTHAIALALFGVLR--PGDELL 100 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT---SEEEEETTS-SHHHHHHHHHHHH----TT-EEE
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCc--hhhhhcccccchHHHHHHHHHhcCC--CCCeEE
Confidence 455677776653111112 222 24466778888889999854 44444 46999999999975443 678888
Q ss_pred EEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCc
Q 013235 189 SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGG 268 (447)
Q Consensus 189 ~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG 268 (447)
+..|.=.=.....+.+.+... -.....|+..-..|....+. -| .+.+++.+.. ++..|.+ |=+.|
T Consensus 101 ~~tG~PYDTL~~VIG~~g~~~--GSL~e~Gi~Y~~v~L~~dg~--~D----~~~i~~~~~~----~tk~v~I---QRSrG 165 (403)
T PF06838_consen 101 SITGKPYDTLEEVIGIRGNGP--GSLKEFGIKYREVPLTEDGT--ID----WEAIKKALKP----NTKMVLI---QRSRG 165 (403)
T ss_dssp ESSSS--CCHHHHHTSSSSSS--SSTGGGT-EEEE--B-TTSS--B-----HHHHHHHHHT----TEEEEEE---E-S-T
T ss_pred EcCCCchhhHHHHhCCCCCCC--CChHHhCceeEEEeecCCCC--cC----HHHHHHhhcc----CceEEEE---ecCCC
Confidence 766543333333444443211 11111344332222221111 12 5667777662 4555553 54445
Q ss_pred eeeC---CCChHHHHHHHHHHh--CCEEEEeccccCccccCCCcccccccCCCCCEEE--eeccccCCc-c-ccccccCH
Q 013235 269 IIEL---APGYLPAVYKSIKKA--GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNGI-P-LGAVVTTP 339 (447)
Q Consensus 269 ~~~~---~~~~l~~l~~l~~~~--g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~-p-igav~~~~ 339 (447)
.-.- +-+-++++.+++++. ++++++|..|..|--+- |--.+-.|++. +=|-.|||+ | =||+++++
T Consensus 166 Ys~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~------EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~ 239 (403)
T PF06838_consen 166 YSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ------EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK 239 (403)
T ss_dssp TSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-------GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH
T ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc------CccccchhheeccceeCCCCCccCcCCEEechH
Confidence 4332 223456666666664 78999999997774322 33445569985 669999996 5 47788999
Q ss_pred HHHHhhcC
Q 013235 340 EIAEVLTR 347 (447)
Q Consensus 340 ~i~~~l~~ 347 (447)
++++....
T Consensus 240 ~lVe~~a~ 247 (403)
T PF06838_consen 240 DLVERAAY 247 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987654
No 376
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=96.89 E-value=0.076 Score=57.70 Aligned_cols=225 Identities=12% Similarity=0.142 Sum_probs=113.4
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc-CCC
Q 013235 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV-QTG 218 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~-~~g 218 (447)
..+.+..+..++.++. .+..|++|+-|.+|.+++..+. ++.+.|.++...|=+...++.+++.. .|..+.. ..|
T Consensus 195 G~i~eAe~~aA~~fgA-d~tyfvvNGTS~~n~av~~a~~---~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~G 270 (713)
T PRK15399 195 GPHLEAEEYIARTFGA-EQSYIVTNGTSTSNKIVGMYAA---PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALG 270 (713)
T ss_pred hHHHHHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccC
Confidence 3455555556666643 3445556666777877776442 34445556666677777777776643 2222110 011
Q ss_pred eEeecCCCCcCCCCCCChHHH-HHHHHHHHHccCCCC---eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEE-EE
Q 013235 219 VHHALNPDPYRGVFGADGEMY-AKDVQDLIDFGTSGH---VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC-IA 293 (447)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~-~~~le~~i~~~~~~~---~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ll-I~ 293 (447)
+.. +.+...+ .+.+++.+++. ++. .++||..|-. .|++.. ++.|.++| |+.+ ++
T Consensus 271 i~g-----------~I~~~~~~~e~I~~~i~~~-p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilv 329 (713)
T PRK15399 271 ILG-----------GIPRREFTRDSIEEKVAAT-TQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHF 329 (713)
T ss_pred CcC-----------CCChhhccHHHHHHHHHhC-CCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEE
Confidence 111 0111100 35677777654 222 4677777732 466665 77777777 7777 59
Q ss_pred eccccCccccCCCc---ccccccCCCCCEE---Eee--ccccCCccccccc-cC-----HHHHHhhcCCcccccCCCChH
Q 013235 294 DEVQAGFARTGSHF---WGFEAHGVVPDIV---TMA--KGIGNGIPLGAVV-TT-----PEIAEVLTRRNYFNTFGGNPV 359 (447)
Q Consensus 294 DEv~tGfgr~G~~~---~~~~~~gv~pDiv---t~s--K~lg~G~pigav~-~~-----~~i~~~l~~~~~~~T~~~np~ 359 (447)
||++.+.-+-.+.+ .+.+ .+-.+|++ |-| |-+++ +--++.+ .+ +.+-+.+. .|.+| +-+=+
T Consensus 330 DEAhgah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~~--m~~ST-SPsY~ 404 (713)
T PRK15399 330 DSAWVPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAFM--MHTST-SPSYP 404 (713)
T ss_pred eccchhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHHH--HHcCC-CcHHH
Confidence 99986643222111 1111 11146887 433 76652 3222222 22 22222221 12222 22211
Q ss_pred HHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHH
Q 013235 360 CTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALK 395 (447)
Q Consensus 360 a~aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~ 395 (447)
-+|..-.+-++++. +.+.+.+.+.+..+|+.|.++.
T Consensus 405 LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~ 443 (713)
T PRK15399 405 IVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLR 443 (713)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 12222223333432 3577788888888999888764
No 377
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.84 E-value=0.1 Score=54.84 Aligned_cols=268 Identities=18% Similarity=0.285 Sum_probs=152.8
Q ss_pred hHHHHHHHHHHHhCCCCCceEEE-cCCHHHHHHHHHHHHHhhc-----CCCeEEEEcCCcccCchhhhhccCCCCccccc
Q 013235 141 HAIADFAEALASKMPGNLKVVFF-TNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~-~~sGseA~e~Aik~ar~~t-----~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~ 214 (447)
....+|.+.|+++. +.+.+.| -|||.+.-.+-++..|.|- +.+.|-..--+-||.-..+....+
T Consensus 582 ~lf~~Le~~Lc~iT--G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Mag-------- 651 (1001)
T KOG2040|consen 582 QLFTELEKDLCEIT--GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAG-------- 651 (1001)
T ss_pred HHHHHHHHHhheee--cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcC--------
Confidence 34567777888776 4555444 6899988888888888873 234455556788998877665543
Q ss_pred cCCCeEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
...++..-...+. .| +.+|++..+++ .++.||+.+. .++.-|+..+ -+++++++.++||.-+.+|
T Consensus 652 ----mkvvpV~~~~~G~--id----~~dLk~kaekh-~~~Laa~MvT-YPST~GvfE~---~i~d~cd~iHehGGQVYlD 716 (1001)
T KOG2040|consen 652 ----MKVVPVGCDANGN--ID----MVDLKAKAEKH-KDNLAALMVT-YPSTHGVFEE---GIDDICDIIHEHGGQVYLD 716 (1001)
T ss_pred ----CEEEEeeccCCCC--cc----HHHHHHHHHHh-hhhhheeEEe-cccccccccc---cHHHHHHHHHhcCCEEEec
Confidence 2233221111111 23 56676666554 4578888775 3344455442 3889999999999999999
Q ss_pred cc----ccCccccCCCccc-ccccCCCCCEEEeeccccC-CccccccccCHHHHHhhcCCcc-----------cccCCCC
Q 013235 295 EV----QAGFARTGSHFWG-FEAHGVVPDIVTMAKGIGN-GIPLGAVVTTPEIAEVLTRRNY-----------FNTFGGN 357 (447)
Q Consensus 295 Ev----~tGfgr~G~~~~~-~~~~gv~pDivt~sK~lg~-G~pigav~~~~~i~~~l~~~~~-----------~~T~~~n 357 (447)
-+ |.|+.|-| .+.+ ..|.++.- ||.=.-|| |--+|-+...+.++..+..... ..+-+..
T Consensus 717 GANMNAqVGlc~pG-d~GaDV~HLNLHK---TFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaa 792 (1001)
T KOG2040|consen 717 GANMNAQVGLCRPG-DIGADVCHLNLHK---TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAA 792 (1001)
T ss_pred CCCccceecccCCc-cccccceeecccc---eeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceecc
Confidence 74 88888877 2221 12333221 45545554 3456667777777766654211 1222222
Q ss_pred hHHH----HHHHHHHHHHhhhhHHHH---HHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeC-CCCCCCCHHHH
Q 013235 358 PVCT----AAGHAVLKVIQKDKLQNN---AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTD-RQLKTPAKAET 429 (447)
Q Consensus 358 p~a~----aaala~L~~i~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~-~~~~~p~~~~~ 429 (447)
|.+. ....+-++++-..++.+. +--+..|+.++|+. .|.++. ++.--.++-||.-| +..|.....++
T Consensus 793 P~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~---hYkil~--~~~~~~vaHEFIlD~r~fK~~agiea 867 (1001)
T KOG2040|consen 793 PWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES---HYKILF--RGENGLVAHEFILDLRPFKKTAGIEA 867 (1001)
T ss_pred CCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh---ccceeE--ecCCcceeeeeeeechhhccccCCcH
Confidence 3333 233456676655554322 22345677776655 344432 33323666676433 33333333345
Q ss_pred HHHHHHHHhCCce
Q 013235 430 LYIMDKMKGICAL 442 (447)
Q Consensus 430 ~~~~~~l~~~Gvl 442 (447)
..+++.|.+-|+.
T Consensus 868 vDvAKRL~DYgFH 880 (1001)
T KOG2040|consen 868 VDVAKRLMDYGFH 880 (1001)
T ss_pred HHHHHHHHhccCC
Confidence 6788888888864
No 378
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=96.79 E-value=0.18 Score=52.89 Aligned_cols=164 Identities=15% Similarity=0.098 Sum_probs=89.3
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCe
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~ 219 (447)
...+.|..|..++.++. ....|.+|+-|-||...+.... +..+.|.++-..|=+...++-+++... +
T Consensus 69 ~G~i~eAqe~aA~~fgA-d~tyFvvNGTS~ank~vi~a~~---~~GD~VLvdRN~HKSi~~glilaGa~P---------v 135 (557)
T COG1982 69 EGPIKEAQELAARVFGA-DHTYFVVNGTSTANKAVINAVL---TPGDKVLVDRNCHKSIHHGLILAGATP---------V 135 (557)
T ss_pred CccHHHHHHHHHHHhCC-CceEEEECCccHHHHHHHHhhc---CCCCEEEecCCccHHHHHHHHHcCCce---------E
Confidence 33455555555566643 3456667777778877776332 344455566666766665566655321 2
Q ss_pred EeecCCCC-cCCCCCCChHHHHHHHHHHHHccCCCC-eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc
Q 013235 220 HHALNPDP-YRGVFGADGEMYAKDVQDLIDFGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (447)
Q Consensus 220 ~~~~~p~~-~~~~~~~d~~~~~~~le~~i~~~~~~~-~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 297 (447)
...+..++ +.-.-+.+ .+.+++.+..+ ++. ..++|..|-. .|++.. +++|.+.+.+.++.+..||.+
T Consensus 136 yl~p~~np~~gi~ggI~----~~~~~~~l~~~-~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah 204 (557)
T COG1982 136 YLEPSRNPLYGIIGGIP----LETFKEALLAH-PDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAH 204 (557)
T ss_pred EecCCCCccccccCCCC----HHHHHHHHHhC-hhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcC
Confidence 22222222 11111223 34555444332 223 6788887743 466665 899999999999999999987
Q ss_pred cCccccCCCcccccccCCCCCEEEee--ccccC
Q 013235 298 AGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN 328 (447)
Q Consensus 298 tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~ 328 (447)
|+-+.-..+..-....---|++|-| |-+++
T Consensus 205 -~~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 205 -PAHFDFSPMLPESALNGGADFVTQSTHKLLAA 236 (557)
T ss_pred -cccccccccCcchhhhcCceEEEechhhhhhh
Confidence 3322110111111112334788877 55553
No 379
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=96.69 E-value=0.069 Score=58.06 Aligned_cols=227 Identities=12% Similarity=0.124 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCC-Ccccccc-CCC
Q 013235 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV-QTG 218 (447)
Q Consensus 141 ~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~-~~~~~~~-~~g 218 (447)
..+.+..+..++.++. .+..|++|+-|.+|.+++..+. ++.+.|.++...|=+...++.+++.. .|..+.. ..|
T Consensus 195 G~i~eAe~~AA~~fgA-d~tyfvvNGTS~~n~av~~a~~---~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~G 270 (714)
T PRK15400 195 GPHKEAEEYIARVFNA-DRSYMVTNGTSTANKIVGMYSA---PAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYG 270 (714)
T ss_pred hHHHHHHHHHHHHhCC-CcEEEEeCchHHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccC
Confidence 3445555555566643 3445556666777777666432 34455556667777777777777643 2221110 011
Q ss_pred eEeecCCCCcCCCCCCChHHH-HHHHHHHHHccCC-C-CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEec
Q 013235 219 VHHALNPDPYRGVFGADGEMY-AKDVQDLIDFGTS-G-HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (447)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~-~~~le~~i~~~~~-~-~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DE 295 (447)
+.. +.+...+ .+.+++.+++... . ..++||..|.. .|++.. ++.|.++|+.++ +++||
T Consensus 271 i~g-----------~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDE 331 (714)
T PRK15400 271 ILG-----------GIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDS 331 (714)
T ss_pred Ccc-----------CCCccccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEc
Confidence 110 0111000 3567777765421 1 12578877732 466665 899999999887 68999
Q ss_pred cccCccccCCCc---ccccccCCCC-C--EEEee--ccccCCccccccc-c----C-HHHHHhhcCCcccccCCCChHHH
Q 013235 296 VQAGFARTGSHF---WGFEAHGVVP-D--IVTMA--KGIGNGIPLGAVV-T----T-PEIAEVLTRRNYFNTFGGNPVCT 361 (447)
Q Consensus 296 v~tGfgr~G~~~---~~~~~~gv~p-D--ivt~s--K~lg~G~pigav~-~----~-~~i~~~l~~~~~~~T~~~np~a~ 361 (447)
++.+.-+-.+.+ .+.+ .|-.+ | ++|=| |-+++ +--++.+ . . +.+.+.+. .|.+| +-+=+-+
T Consensus 332 Awgah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~~--m~~ST-SPsY~l~ 406 (714)
T PRK15400 332 AWVPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYM--MHTTT-SPHYGIV 406 (714)
T ss_pred cchhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHHH--HHcCC-CcHHHHH
Confidence 987643222111 1111 12111 4 66655 76652 2222221 1 1 22222221 12222 2221112
Q ss_pred HHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHH
Q 013235 362 AAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALK 395 (447)
Q Consensus 362 aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~ 395 (447)
|..-.+-.+++. +.+.+.+.+.+..+|+.|.++.
T Consensus 407 ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~ 443 (714)
T PRK15400 407 ASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (714)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 222223333432 3567788888888998888764
No 380
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.34 E-value=0.26 Score=48.31 Aligned_cols=226 Identities=20% Similarity=0.200 Sum_probs=113.8
Q ss_pred CeEEEeecccEEEecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccc-cchHHHHHHHHHHHhCCCC---
Q 013235 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGN--- 157 (447)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~elae~L~~~~~~~--- 157 (447)
|.-+-=|-|+| .|.+|+-|+ -|.|.+|-++-+. .. ...-| +-....|+.+.-+++.-++
T Consensus 52 ~~KiNLgvGaY-Rdd~gKp~v--------------L~~VrkAE~ql~~-~~-ldKEYlpI~Gl~eF~k~sakLa~G~~s~ 114 (427)
T KOG1411|consen 52 PKKINLGVGAY-RDDNGKPYV--------------LPSVRKAEQQLAS-LS-LDKEYLPITGLAEFNKLSAKLALGDNSP 114 (427)
T ss_pred cceeeecccce-ecCCCCeee--------------eHHHHHHHHHHhh-hc-ccchhccccchHHHHHHHHHHhhcCCch
Confidence 45556678887 688888775 1667776544333 11 01112 2233444444444433111
Q ss_pred ---CceEEE--cCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCC
Q 013235 158 ---LKVVFF--TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (447)
Q Consensus 158 ---~~~v~~--~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (447)
.+++.+ +=||+-|.-.+-.....+-+..+|.+.++++-... ..++ ..|+..-.+.+......
T Consensus 115 ~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~---------~if~----~ag~~~~~yrYyd~~t~ 181 (427)
T KOG1411|consen 115 VIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHK---------NIFK----DAGLPVKFYRYYDPKTR 181 (427)
T ss_pred hhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccC---------cccc----ccCcceeeeeecccccc
Confidence 223333 44777666665554433445677888888772111 0111 11221111111111111
Q ss_pred CCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcc----
Q 013235 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW---- 308 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~---- 308 (447)
+.|.+..++++.+. ++.-..++-..-.+++|+- |..+-+++|.++.++.+.+-++|=+|.||. +|+ ++
T Consensus 182 gld~~g~ledl~~~-----p~gs~ilLhaCaHNPTGvD-Pt~eqw~ki~~~~~~k~~~pffDmAYQGfa-SG~-~d~DA~ 253 (427)
T KOG1411|consen 182 GLDFKGMLEDLGEA-----PEGSIILLHACAHNPTGVD-PTKEQWEKISDLIKEKNLLPFFDMAYQGFA-SGD-LDKDAQ 253 (427)
T ss_pred ccchHHHHHHHhcC-----CCCcEEEeehhhcCCCCCC-ccHHHHHHHHHHhhhccccchhhhhhcccc-cCC-chhhHH
Confidence 22333333443322 3222233333466667754 588899999999999999999999999994 552 32
Q ss_pred ccccc-CCCCCEE---EeeccccC-Cccccc---cccCHHHHHhh
Q 013235 309 GFEAH-GVVPDIV---TMAKGIGN-GIPLGA---VVTTPEIAEVL 345 (447)
Q Consensus 309 ~~~~~-gv~pDiv---t~sK~lg~-G~piga---v~~~~~i~~~l 345 (447)
+..++ ..--++. .++|-||= |=++|+ |+-+++.+..+
T Consensus 254 avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV 298 (427)
T KOG1411|consen 254 AVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRV 298 (427)
T ss_pred HHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHH
Confidence 11111 1112333 48888882 445555 34445544433
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=95.32 E-value=2.9 Score=47.04 Aligned_cols=159 Identities=17% Similarity=0.227 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhCCCCCc--eEEEcCCHHHHHHHHHHHHHhhcC--CCeEEEEcCCcccCchhhhhccCCCCccccccCCC
Q 013235 143 IADFAEALASKMPGNLK--VVFFTNSGTEANELAIMMARLYTG--CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (447)
Q Consensus 143 ~~elae~L~~~~~~~~~--~v~~~~sGseA~e~Aik~ar~~t~--~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g 218 (447)
+-++-..++++. +++ +.-+...+|.+-| |+.|++.+++ +++++ ...+-|=.+...+.. | ....|
T Consensus 126 l~e~Qtmi~~Lt--Gm~vaNASl~D~atA~aE-A~~ma~~~~~~k~~~~~-v~~~~hP~~~~v~~t-----~---~~~~g 193 (954)
T PRK12566 126 LLNFQQMTIDLT--GLDLANASLLDEATAAAE-AMALAKRVAKSKSNRFF-VDEHCHPQTLSVLRT-----R---AEGFG 193 (954)
T ss_pred HHHHHHHHHHHh--CchhhhhhhccchhHHHH-HHHHHHHHhhcCCCEEE-ECCCCCHHHHHHHHH-----h---hhcCC
Confidence 346666777776 344 2234456666666 4444554544 45554 455555222222111 0 01124
Q ss_pred eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE--ecc
Q 013235 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA--DEV 296 (447)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~--DEv 296 (447)
+..+. +++++.+ .++++++++.- ++.-|.+.. +++|.++++++|+++|+ |=.
T Consensus 194 ~~i~~-----------------~~~~~~~----~~~~~~v~vq~-P~~~G~i~d----~~~i~~~~h~~gal~~~~~d~l 247 (954)
T PRK12566 194 FELVV-----------------DAVDNLA----AHAVFGALLQY-PDTHGEIRD----LRPLIDQLHGQQALACVAADLL 247 (954)
T ss_pred cEEEE-----------------cchhhcC----CCCEEEEEEEC-CCCceEEcc----HHHHHHHHHHcCCEEEEEeCHH
Confidence 43332 2333332 23688888742 234466644 89999999999999773 221
Q ss_pred -ccCccccCCCcccccccCCCCCEEE-----eecccc-CCccccccccCHHHHHhhcCC
Q 013235 297 -QAGFARTGSHFWGFEAHGVVPDIVT-----MAKGIG-NGIPLGAVVTTPEIAEVLTRR 348 (447)
Q Consensus 297 -~tGfgr~G~~~~~~~~~gv~pDivt-----~sK~lg-~G~pigav~~~~~i~~~l~~~ 348 (447)
.+.+-.-| .+| .||++ ||=.++ ||--.|++.+++++...+..+
T Consensus 248 aL~ll~~Pg-------e~G--ADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGR 297 (954)
T PRK12566 248 SLLVLTPPG-------ELG--ADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGR 297 (954)
T ss_pred HHhCCCChh-------hcC--CcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCC
Confidence 11121122 122 38874 444444 444478888888888777653
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=94.53 E-value=0.91 Score=45.65 Aligned_cols=189 Identities=13% Similarity=0.145 Sum_probs=93.0
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCccccc---ccCCC
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE---AHGVV 316 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~---~~gv~ 316 (447)
.+.+|+.+++.+++.+.+|+.- ..+..|.. ++-+++|.++|++||++.|+--+|+ .--+- -+--.+ ..|..
T Consensus 141 ~~~ie~~i~~~G~~~iLcvltt-tscfapr~---~D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~-~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 141 LEAIEAKIEELGADNILCVLTT-TSCFAPRL---PDDIEEIAKICKEYDIPHLVNNAYG-VQSSK-CMHLIQQAWRVGRV 214 (389)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEE-SSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HH-HHHHHHHHHHHSTC
T ss_pred HHHHHHHHHHhCCCCeEEEEEe-cCccCCCC---CccHHHHHHHHHHcCCceEEccchh-hhHHH-HHHHHHHHHhcCCc
Confidence 4667777776555556565544 33333332 3458999999999999999999984 50000 000000 12222
Q ss_pred CCEE-EeeccccCCccc-cccc--cCHHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q 013235 317 PDIV-TMAKGIGNGIPL-GAVV--TTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKE 389 (447)
Q Consensus 317 pDiv-t~sK~lg~G~pi-gav~--~~~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~---~~l~~~~~~~g~~l~~ 389 (447)
|-++ .+.|-+= .|+ |+++ ..+..++.+... +..--+..|. .-...+|..+=. ..++....+.-.++++
T Consensus 215 da~vqS~dkNF~--VPvGgai~As~~~~~i~~vs~~-YpGRas~sp~--ld~~itLl~LG~~g~~~ll~~r~~~f~~l~e 289 (389)
T PF05889_consen 215 DAFVQSTDKNFM--VPVGGAIMASFDPSGILAVSKE-YPGRASASPS--LDLFITLLSLGCTGYGALLKERKASFPYLKE 289 (389)
T ss_dssp SEEEEEHHHHHC--EESSHEEEEESSHHHHHHHHHT-SHSHBTSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEE--ecCCCcEEEecCHHHHHHHHHH-hhhhhhcccc--hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 2211 2333331 011 1122 234555544421 1110011111 112333333322 2355666677789999
Q ss_pred HHHHHHHhcC-CeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCce
Q 013235 390 RLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICAL 442 (447)
Q Consensus 390 ~L~~l~~~~~-~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvl 442 (447)
+|+++.++++ .+.+.+..-..+++++..-..... .....+...|+.|||-
T Consensus 290 rl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~---k~~~~lgs~Lf~R~Vs 340 (389)
T PF05889_consen 290 RLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQ---KDGTFLGSMLFKRGVS 340 (389)
T ss_dssp HHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCS---SHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhhhhhcCCCCCCeeEEEECccchhhcc---chhhhHHHHHHhCCcc
Confidence 9999999986 355666666777777742111111 1345678889999873
No 383
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=94.50 E-value=3.8 Score=39.79 Aligned_cols=296 Identities=17% Similarity=0.124 Sum_probs=151.8
Q ss_pred ccCCCCCHHHHHHHHHHHHhc------cccccc----ccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHH-
Q 013235 111 VCCGHCHPYVVDSIVNQIKRI------QHSTVL----YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR- 179 (447)
Q Consensus 111 ~~lGh~~p~v~~A~~~~l~~~------~~~~~~----~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar- 179 (447)
++||.-+....+.+.+.+++- +|...- -.++.+. ..++...+...+.|-++||=+--+. .+.+..
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il---~l~~~iVGA~e~EvavmNsLTvNlh-~Ll~sFy 149 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPIL---PLLAPIVGAQENEVAVMNSLTVNLH-SLLISFY 149 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhh---hhhhhhccCCchhhhhHhhhhhHHH-HHHHHhc
Confidence 467877777777777777652 232211 1122333 3444555555667778887764333 333322
Q ss_pred hhc-CCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHHH--HHHHHHHHHccCCCCeE
Q 013235 180 LYT-GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY--AKDVQDLIDFGTSGHVA 256 (447)
Q Consensus 180 ~~t-~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~--~~~le~~i~~~~~~~~a 256 (447)
.-| .|.+|+.-.++|.......-+-..... .. +......+. |. ..+.+ .+++.+.|++. .+.+|
T Consensus 150 KPTekR~KILlE~kaFPSDhYAiesQ~~lhG--~~-~e~sm~~ie-PR--------EGEetlRteDILd~IEkn-gDeiA 216 (465)
T KOG3846|consen 150 KPTEKRFKILLEKKAFPSDHYAIESQCKLHG--IS-PENSMIQIE-PR--------EGEETLRTEDILDTIEKN-GDEIA 216 (465)
T ss_pred CCcchhhhhhhccCCCCchHHHHHhhhhhcC--CC-hHHheEEec-cc--------ccccchhHHHHHHHHHhc-CCeEE
Confidence 112 467888778887654443322111000 00 000111111 11 11111 35566666654 56899
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEee--ccccCCc-ccc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGI-PLG 333 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~-pig 333 (447)
.|++..||--+|-.-. +.+|-..-+..|+++=+|=++. +|..- +. ...||+ |..|.. |-+..|- -||
T Consensus 217 ~v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNVp--L~-LHdWgV--DFACWCSYKYlnaGaGgIg 286 (465)
T KOG3846|consen 217 LVCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNVP--LQ-LHDWGV--DFACWCSYKYLNAGAGGIG 286 (465)
T ss_pred EEEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCCc--eE-EeecCC--ceEEEeeecccccCCCccc
Confidence 9999999988877654 5566655566689999998885 55332 11 123444 777632 5543232 234
Q ss_pred ccccCHHHH----HhhcC--------------------CcccccCCCChHHHHH-HHHHHHHHhhhhHHHHHHHHHHHHH
Q 013235 334 AVVTTPEIA----EVLTR--------------------RNYFNTFGGNPVCTAA-GHAVLKVIQKDKLQNNAHVVGSYLK 388 (447)
Q Consensus 334 av~~~~~i~----~~l~~--------------------~~~~~T~~~np~a~aa-ala~L~~i~~~~l~~~~~~~g~~l~ 388 (447)
.....++.. ..+.. +..+.-.+..|+-..+ .++.|++...-+ .++++.+.-+|.
T Consensus 287 GlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLT 365 (465)
T KOG3846|consen 287 GLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLT 365 (465)
T ss_pred eeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHH
Confidence 433332221 11110 0011222334444444 345677665433 566666666666
Q ss_pred HHHHHHHHhc-C-------------Ce--eeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 389 ERLTALKDKY-G-------------II--GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 389 ~~L~~l~~~~-~-------------~i--~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
.-|+.|.+.. + ++ ..+.-+|.-+.+.|..+ ...++++|.+|||+.-
T Consensus 366 gYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp----------~~~vfqeL~krGv~~D 427 (465)
T KOG3846|consen 366 GYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP----------TPKVFQELHKRGVIGD 427 (465)
T ss_pred hHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC----------chHHHHHHHHcCeecc
Confidence 6565554321 1 11 23344466666666433 2568999999999874
No 384
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=94.16 E-value=0.63 Score=45.08 Aligned_cols=81 Identities=22% Similarity=0.321 Sum_probs=54.1
Q ss_pred ccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC---Cccccccc---CCCCCEE--Eeecccc-CCcccc
Q 013235 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS---HFWGFEAH---GVVPDIV--TMAKGIG-NGIPLG 333 (447)
Q Consensus 263 i~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~---~~~~~~~~---gv~pDiv--t~sK~lg-~G~pig 333 (447)
-.+++|+- |+.+-++.|.+..++...+..+|-+|.||. +|. .-|+..++ | .+=+| .|+|-+| -|=++|
T Consensus 187 AhNPTGmD-PT~EQW~qia~vik~k~lf~fFDiAYQGfA-SGD~~~DawAiR~fV~~g-~e~fv~QSFaKNfGlYneRvG 263 (410)
T KOG1412|consen 187 AHNPTGMD-PTREQWKQIADVIKSKNLFPFFDIAYQGFA-SGDLDADAWAIRYFVEQG-FELFVCQSFAKNFGLYNERVG 263 (410)
T ss_pred ccCCCCCC-CCHHHHHHHHHHHHhcCceeeeehhhcccc-cCCccccHHHHHHHHhcC-CeEEEEhhhhhhccccccccc
Confidence 57777865 478889999999999999999999999995 442 34555432 2 22334 3889887 133433
Q ss_pred ---ccccCHHHHHhhc
Q 013235 334 ---AVVTTPEIAEVLT 346 (447)
Q Consensus 334 ---av~~~~~i~~~l~ 346 (447)
.|+-++.++..+.
T Consensus 264 nltvv~~n~a~i~~v~ 279 (410)
T KOG1412|consen 264 NLTVVVNNPAVIAGVK 279 (410)
T ss_pred ceEEEecChhHHHHHH
Confidence 3445566555443
No 385
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=93.76 E-value=3.8 Score=40.78 Aligned_cols=48 Identities=29% Similarity=0.306 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCEEEEecccc-CccccCCCcccccccCCCCCEEE--eeccccC
Q 013235 277 LPAVYKSIKKAGGLCIADEVQA-GFARTGSHFWGFEAHGVVPDIVT--MAKGIGN 328 (447)
Q Consensus 277 l~~l~~l~~~~g~llI~DEv~t-Gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~ 328 (447)
.++++++|++.|++|++|=++. |+--.|---.-||+ -|||| .=|+|-|
T Consensus 206 YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~DiVTTTTHKsLRG 256 (477)
T KOG2467|consen 206 YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDIVTTTTHKSLRG 256 (477)
T ss_pred HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cceeeccccccccC
Confidence 6899999999999999998763 33222210011222 38886 4588864
No 386
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=93.70 E-value=0.88 Score=45.89 Aligned_cols=157 Identities=19% Similarity=0.161 Sum_probs=87.3
Q ss_pred eEEEcCCHHHHHHHHHHHHHhh--cC---------CCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCc
Q 013235 160 VVFFTNSGTEANELAIMMARLY--TG---------CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPY 228 (447)
Q Consensus 160 ~v~~~~sGseA~e~Aik~ar~~--t~---------~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~ 228 (447)
.=+|+++|+-+|..|+..||.. ++ +.-|+....--|-+...+...-+ +....+..++ ...
T Consensus 161 DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg-------~gtd~c~~v~--t~e 231 (510)
T KOG0629|consen 161 DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLG-------LGTDHCIKVK--TDE 231 (510)
T ss_pred CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhc-------cCCceeEEec--ccc
Confidence 3579999999999999999852 11 12233223333322222211111 1111233333 222
Q ss_pred CCCCCCChHHHHHHHHHHHHccCC-CCeEEEEEccccCCC--ceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCC
Q 013235 229 RGVFGADGEMYAKDVQDLIDFGTS-GHVAGFLSESIQGVG--GIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS 305 (447)
Q Consensus 229 ~~~~~~d~~~~~~~le~~i~~~~~-~~~aavi~Epi~~~g--G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~ 305 (447)
++.. ..++||+.|..+.. +-+ -+++.-.-|++ |..-+ |..|.++|++|+..+-+|-+--| |
T Consensus 232 ~Gkm------~~~dLe~kile~k~kg~~-Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWmHvDAAwGG----g- 295 (510)
T KOG0629|consen 232 RGKM------IPDDLEKKILEAKAKGGV-PFFVNATAGTTVLGAFDD----LNGIADICEKHKLWMHVDAAWGG----G- 295 (510)
T ss_pred cCcc------chHHHHHHHHHHHhcCCC-CeEEEecCCceeeeccCc----HHHHHHHHHhcCEEEEeeccccc----c-
Confidence 2221 25778876654322 222 13333333332 44444 99999999999999999987644 1
Q ss_pred Ccccc----cccCC-CCCEEEee--ccccCCccccccccCHHH
Q 013235 306 HFWGF----EAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPEI 341 (447)
Q Consensus 306 ~~~~~----~~~gv-~pDivt~s--K~lg~G~pigav~~~~~i 341 (447)
-+.+. ..-|+ ..|-|+.. |-+|..++.|+.+++.+=
T Consensus 296 lLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~g 338 (510)
T KOG0629|consen 296 LLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEG 338 (510)
T ss_pred cccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHH
Confidence 11111 12345 34677765 888888999999988764
No 387
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=93.22 E-value=11 Score=38.83 Aligned_cols=182 Identities=17% Similarity=0.168 Sum_probs=91.4
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHH-hCCEEEEeccccCcccc-C---CCcccccccC
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK-AGGLCIADEVQAGFART-G---SHFWGFEAHG 314 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~-~g~llI~DEv~tGfgr~-G---~~~~~~~~~g 314 (447)
...+.+.+++ ++.+++.+--+-..|.+-+ .++|.++.-| +++++-+|-.-.||--- | ...|.|..-+
T Consensus 208 ~~k~~~~i~e----Nti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~ 279 (491)
T KOG1383|consen 208 PGKVVRMIDE----NTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPG 279 (491)
T ss_pred HHHHHHHhcc----ceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCC
Confidence 3455555543 5667776654445565555 8999999999 99999999998887331 2 1123332222
Q ss_pred CCCCEEEee--cccc-CCccccccccC-HHHH-HhhcC-----Cc--ccccCCCC--hHHHHHHHHHHHHHhhhhHH---
Q 013235 315 VVPDIVTMA--KGIG-NGIPLGAVVTT-PEIA-EVLTR-----RN--YFNTFGGN--PVCTAAGHAVLKVIQKDKLQ--- 377 (447)
Q Consensus 315 v~pDivt~s--K~lg-~G~pigav~~~-~~i~-~~l~~-----~~--~~~T~~~n--p~a~aaala~L~~i~~~~l~--- 377 (447)
++-|-+-+ -|+. .| +|+|+-+ +++. +.+.- +. ...|.+|+ ..-.++.-++|=-+-.+++.
T Consensus 280 -V~Sisa~~HKYGl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~ 356 (491)
T KOG1383|consen 280 -VTSISADGHKYGLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENT 356 (491)
T ss_pred -ceeEeeccceeeeeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHH
Confidence 23444444 2222 12 2555533 3322 11110 11 11233333 11122233333223345444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeEeecceeEEEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 378 NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 378 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+++.+....|++++++.. ++. +-|+-++ .+-+.+.+. . ..-++.+.|.++|-.+.
T Consensus 357 ~~ive~~~~l~egie~i~-~i~----i~gkp~v-s~~~~~s~~--~----~i~elsd~l~~~GW~ln 411 (491)
T KOG1383|consen 357 QNIVETARKLREGIENIK-GIK----IVGKPLV-SFILFGSND--V----NIFELSDLLRKKGWILN 411 (491)
T ss_pred HHHHHHHHHHHHhhhccc-cce----ecCCCcE-EEEEccCCc--c----chhhhhHHHHhcCcCcc
Confidence 556667788888888742 222 3333333 333322211 1 13467778888886653
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=92.04 E-value=14 Score=36.81 Aligned_cols=161 Identities=16% Similarity=0.131 Sum_probs=88.5
Q ss_pred EEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCC-CCCEEEee--ccccC-Ccc
Q 013235 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGN-GIP 331 (447)
Q Consensus 256 aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv-~pDivt~s--K~lg~-G~p 331 (447)
+-|..-++....|+..++..+. .. +.++|+|=.=.-|+| ..++ +-|++.+| |-+|+ |
T Consensus 146 ayv~~~~NeTi~Gv~v~~~p~~------~~--~~~~v~D~SS~ilsr---------~iDvsk~dviyagaQKnlGpaG-- 206 (365)
T COG1932 146 AYVHFCWNETISGVEVPELPDI------GS--DGLLVADASSAILSR---------PIDVSKYDVIYAGAQKNLGPAG-- 206 (365)
T ss_pred cEEEEecCCcccceEccCCCCC------CC--CceEEEecccHHhcC---------CCChhHcceEEEehhhccCccc--
Confidence 3355555545556655432221 11 178888854332322 2233 34888888 99995 7
Q ss_pred ccccccCHHHHHhhcCC------------cccccCCCChHHH-HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 013235 332 LGAVVTTPEIAEVLTRR------------NYFNTFGGNPVCT-AAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY 398 (447)
Q Consensus 332 igav~~~~~i~~~l~~~------------~~~~T~~~np~a~-aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~ 398 (447)
++.++.++++.+.+... ...+||+..|..+ ....-+++.+++.+=++.+.++.+.=-+.|-+..++.
T Consensus 207 ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s 286 (365)
T COG1932 207 LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS 286 (365)
T ss_pred eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 68889999988766442 1236777765544 4455688888876533333333333333344444433
Q ss_pred CC----eeeEeecceeE-EEEEeeCCCCCCCCHHHHHHHHHHHHhCCceee
Q 013235 399 GI----IGDVRGRGFLL-GVEFVTDRQLKTPAKAETLYIMDKMKGICALFF 444 (447)
Q Consensus 399 ~~----i~~vrg~Gl~~-giel~~~~~~~~p~~~~~~~~~~~l~~~Gvlv~ 444 (447)
+. +.. --+..|- .+.+. +.+....+++++.++|+...
T Consensus 287 ~fy~~~v~~-~~RS~mnV~f~~~--------~~~ld~~fv~eae~~gl~~l 328 (365)
T COG1932 287 DFYRNLVAK-ANRSRMNVTFTLV--------DAELDKGFVAEAEAAGLIYL 328 (365)
T ss_pred Cccccccch-hhccceeEEEEcC--------cHHHHHHHHHHHHHcCCcee
Confidence 22 222 2223332 23332 33456788999999887654
No 389
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=92.00 E-value=0.86 Score=39.99 Aligned_cols=56 Identities=14% Similarity=0.142 Sum_probs=41.6
Q ss_pred cchHHHHHHHHHHHhCC----CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCccc
Q 013235 139 LNHAIADFAEALASKMP----GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHG 196 (447)
Q Consensus 139 ~~~~~~elae~L~~~~~----~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG 196 (447)
..+.+..+++.+.+..+ .+.++|++++++++|++.+++.... .++.|++.++.|.|
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d--pGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD--PGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC--CCCEEEEeCCCCCC
Confidence 44555666666666543 3457899999999999998875543 67889999999975
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=90.73 E-value=13 Score=36.88 Aligned_cols=173 Identities=17% Similarity=0.183 Sum_probs=87.7
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHhh----cCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCC
Q 013235 157 NLKVVFFTNSGTEANELAIMMARLY----TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (447)
Q Consensus 157 ~~~~v~~~~sGseA~e~Aik~ar~~----t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (447)
+...++|+++.++-+.+|+-..-.. .+.-+|++-.+-|--....+--+ ....|++ .-....+.
T Consensus 65 ~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f-~s~~y~w---------~Gda~~~~--- 131 (363)
T PF04864_consen 65 DGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFF-DSRLYKW---------AGDASNFK--- 131 (363)
T ss_dssp TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT--BTTEEE---------EEECCCGT---
T ss_pred cCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhc-cccCccc---------cccHHhhc---
Confidence 3467889999999999888643222 12346777666663322221100 0011111 11011110
Q ss_pred CCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccc
Q 013235 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA 312 (447)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~ 312 (447)
+...++...=++..|+++.|.... .+++..+..+|-|=+|--= ++-.+.
T Consensus 132 ---------------~~~~~~~~IElVTSPNNPDG~lr~----------~V~~g~~~k~I~D~AYYWP-----hyTpI~- 180 (363)
T PF04864_consen 132 ---------------NSDNPSPYIELVTSPNNPDGQLRE----------AVLNGSSGKVIHDLAYYWP-----HYTPIT- 180 (363)
T ss_dssp ---------------T-S-CCGEEEEEESS-TTT----------------SSTTTEEEEEEE-TT-ST-----TTS----
T ss_pred ---------------cCCCCCCeEEEEeCCCCCcccccc----------hhcCCCCcceeeeeeeecc-----cccccC-
Confidence 111134566678888876653322 1234455667999887311 111111
Q ss_pred cCCCCCEE--Eeecccc-CCccccccccC-HHHHHhhcCCcccccCCCChHHHHHHHHHHHHHhh
Q 013235 313 HGVVPDIV--TMAKGIG-NGIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (447)
Q Consensus 313 ~gv~pDiv--t~sK~lg-~G~pigav~~~-~~i~~~l~~~~~~~T~~~np~a~aaala~L~~i~~ 373 (447)
.-..-||+ |+||.-| +|-|+|+.+.+ ++++..+......+|.|.+-=++..++..|+.+-+
T Consensus 181 ~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~ 245 (363)
T PF04864_consen 181 APADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLD 245 (363)
T ss_dssp S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHh
Confidence 11234777 6889988 68999998876 55666665555668999888888888888887743
No 391
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=82.17 E-value=29 Score=33.83 Aligned_cols=185 Identities=16% Similarity=0.160 Sum_probs=96.9
Q ss_pred chHHHHHHHHHHHhCCCCCceEE-EcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCC
Q 013235 140 NHAIADFAEALASKMPGNLKVVF-FTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~-~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g 218 (447)
+-.+..|.+-.++.+.....-|. -.-||+.|+..|+--.. .+++.+++..|+=.-...-...+.+...- .....+
T Consensus 64 D~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~L--RpgDell~i~G~PYDTLeevIG~rg~~~g--SL~dfg 139 (416)
T COG4100 64 DLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGIL--RPGDELLYITGSPYDTLEEVIGLRGEGQG--SLKDFG 139 (416)
T ss_pred ccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhcc--CCCCeEEEecCCcchhHHHHhccCCCCcc--cHHHhC
Confidence 44566677777777754322111 13589999999986432 25677776655432222222222221100 000012
Q ss_pred eEeecCCCCcCCCCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCC---CChHHHHHHHHHHh--CCEEEE
Q 013235 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA---PGYLPAVYKSIKKA--GGLCIA 293 (447)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~---~~~l~~l~~l~~~~--g~llI~ 293 (447)
+..-..|....+. .| .+.+++.+. +++..|.+ |-+-|.---| -.-++++.++.++- ++++.+
T Consensus 140 i~Y~~v~Lt~~gk--iD----~~~v~~~i~----~~tkli~I---QRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFV 206 (416)
T COG4100 140 IKYKAVPLTADGK--ID----IQAVKTAIS----DRTKLIGI---QRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFV 206 (416)
T ss_pred cceeecccccCCc--cc----HHHHHHhcC----ccceEEEE---EeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEE
Confidence 2111111111111 12 445555553 24455543 4443432211 23456666666664 689999
Q ss_pred eccccCccccCCCcccccccCCCCCEE--EeeccccCCc--cccccccCHHHHHhhcC
Q 013235 294 DEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGI--PLGAVVTTPEIAEVLTR 347 (447)
Q Consensus 294 DEv~tGfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~--pigav~~~~~i~~~l~~ 347 (447)
|..|..|-.+- |.-.+-.|++ .+=|-.|||+ .=||+++++++.+....
T Consensus 207 DNCYGEFvE~~------EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~y 258 (416)
T COG4100 207 DNCYGEFVEEK------EPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAY 258 (416)
T ss_pred eccchhhhhcc------CccccchhhhccceeeCCCCceeeccceeechHHHHHhhce
Confidence 99987663221 3334556887 4779999886 45789999999887654
No 392
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=77.93 E-value=13 Score=38.26 Aligned_cols=63 Identities=21% Similarity=0.235 Sum_probs=41.6
Q ss_pred CCCCChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccC
Q 013235 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG 299 (447)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG 299 (447)
.|+-+.+.+.+++++-+++ +-+-.+++- ..|++|... -+.|.+|-.+|+++|+.|-+|-+|.|
T Consensus 214 n~~mr~~~L~~AIe~D~ar---GlIPf~v~a-t~GTT~~ca--~D~l~elg~Vc~~~glWLHVDAAYAG 276 (511)
T KOG0628|consen 214 NFGMRGDTLRKAIEEDIAR---GLIPFFVCA-TLGTTSSCA--FDELEELGPVCREEGLWLHVDAAYAG 276 (511)
T ss_pred CcCCCHHHHHHHHHHHHhC---CCccEEEEE-eecCccccc--cccHHHhcchhhhcCEEEEeehhhcc
Confidence 3444545445555554443 344444443 446665544 45599999999999999999999986
No 393
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=70.47 E-value=14 Score=30.45 Aligned_cols=52 Identities=17% Similarity=0.317 Sum_probs=35.0
Q ss_pred HHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhh
Q 013235 148 EALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT 201 (447)
Q Consensus 148 e~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~ 201 (447)
+.+....+.+...|++|.+|..+-..+..+.+. |-.++..+.++|-++....
T Consensus 55 ~~l~~~~~~~~~ivv~C~~G~rs~~aa~~L~~~--G~~~v~~l~gG~~~~~~~~ 106 (117)
T cd01522 55 AELEEKVGKDRPVLLLCRSGNRSIAAAEAAAQA--GFTNVYNVLEGFEGDLDAA 106 (117)
T ss_pred HHHHhhCCCCCeEEEEcCCCccHHHHHHHHHHC--CCCeEEECcCceecCCCCC
Confidence 334343344456778888988787776665443 6778888899998776543
No 394
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=63.27 E-value=82 Score=28.85 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=28.3
Q ss_pred CCeEEEEEccccCCCceeeCC-----------CChHHHHHHHHHHhCCEEEE-eccc
Q 013235 253 GHVAGFLSESIQGVGGIIELA-----------PGYLPAVYKSIKKAGGLCIA-DEVQ 297 (447)
Q Consensus 253 ~~~aavi~Epi~~~gG~~~~~-----------~~~l~~l~~l~~~~g~llI~-DEv~ 297 (447)
.++..||+|++..--...... ..++..|.++|+++++.+|+ .++.
T Consensus 113 ~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~tnq~~ 169 (226)
T cd01393 113 GRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVFTNQVR 169 (226)
T ss_pred CCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEEEe
Confidence 478899999986531110011 12456789999999987664 4443
No 395
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=55.91 E-value=24 Score=31.77 Aligned_cols=58 Identities=16% Similarity=0.166 Sum_probs=35.1
Q ss_pred ChHHHHHHHHHHHHccCCCCeEEEEEccccCC----Cc-eeeCCCChHHHHHHHHHHhCCEEE
Q 013235 235 DGEMYAKDVQDLIDFGTSGHVAGFLSESIQGV----GG-IIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 235 d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~----gG-~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
+.+.+.+.++++++.........+++.|.... ++ ....-+.|-+.++++|+++|+.+|
T Consensus 88 ~~~~~~~nl~~ii~~~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 88 PYTTYKEYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 34556666777765432224456777774321 11 112234678899999999998875
No 396
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=54.30 E-value=37 Score=33.33 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=27.3
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEecc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv 296 (447)
.|++..-.+.+ .+++|+.+|.++|++.|+.+|+|=-
T Consensus 132 ~VvlsGSlP~g----~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 132 IVVLSGSLPPG----VPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred EEEEeCCCCCC----CCHHHHHHHHHHHHhcCCeEEEECC
Confidence 35555433332 4788999999999999999999953
No 397
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.72 E-value=68 Score=32.43 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHHHhcccccccccch--HHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhh
Q 013235 116 CHPYVVDSIVNQIKRIQHSTVLYLNH--AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY 181 (447)
Q Consensus 116 ~~p~v~~A~~~~l~~~~~~~~~~~~~--~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~ 181 (447)
.|-+|.+|+.+.-++.. .+.+..- ...|..--|.+++.. ..++++++||+|-.+.+-.+|+.+
T Consensus 434 tHrEiQqaLvdi~DKpA--~FVGSrQWIGStEis~vLn~ll~~-~skil~v~sGaEva~~~rELA~HF 498 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPA--KFVGSRQWIGSTEISFVLNELLKL-ESKILAVNSGAEVAERVRELARHF 498 (577)
T ss_pred cHHHHHHHHHhccCccc--ceecccceecchhHHHHHHHHhcc-ceEEEEeccccHHHHHHHHHHHHh
Confidence 46788888776555431 1111111 112344445555543 356899999999999999999875
No 398
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=46.80 E-value=38 Score=25.42 Aligned_cols=41 Identities=15% Similarity=0.298 Sum_probs=30.0
Q ss_pred CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 155 PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 155 ~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
+.+...+++|++|..|...+-.+... |..++..++|+|-++
T Consensus 48 ~~~~~vv~~c~~~~~a~~~~~~l~~~--G~~~v~~l~gG~~~w 88 (89)
T cd00158 48 DKDKPIVVYCRSGNRSARAAKLLRKA--GGTNVYNLEGGMLAW 88 (89)
T ss_pred CCCCeEEEEeCCCchHHHHHHHHHHh--CcccEEEecCChhhc
Confidence 34456788888888888777666554 567888899988654
No 399
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=45.23 E-value=1.3e+02 Score=25.50 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=19.3
Q ss_pred chHHHHHHHHHHHhCCCCCceEEEcCCHHHHH
Q 013235 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (447)
Q Consensus 140 ~~~~~elae~L~~~~~~~~~~v~~~~sGseA~ 171 (447)
.+.+.+.++.+++.+..+-...++.|++|.++
T Consensus 18 ~~~i~~aa~~i~~~~~~gg~i~~~G~G~S~~~ 49 (138)
T PF13580_consen 18 AEAIEKAADLIAEALRNGGRIFVCGNGHSAAI 49 (138)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEEESTHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCchhhhH
Confidence 45666777788777655555566666666433
No 400
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=45.16 E-value=3.1e+02 Score=26.91 Aligned_cols=115 Identities=17% Similarity=0.128 Sum_probs=63.1
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChHH
Q 013235 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEM 238 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~ 238 (447)
..|+++.+-|..++.-++.|+....+..||+.++.=. ...-.++. +....|+.....|+
T Consensus 163 nEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~-~qgH~~Ak--------~la~~giettVI~d------------ 221 (353)
T KOG1465|consen 163 NEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPN-NQGHELAK--------PLAQAGIETTVIPD------------ 221 (353)
T ss_pred CceEEecCccHHHHHHHHHHHhccCceEEEEeecCCc-ccchHhhH--------HHHHcCCeeEEecc------------
Confidence 4688999999999999999887544456666554321 11000000 01113444433332
Q ss_pred HHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccC
Q 013235 239 YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (447)
Q Consensus 239 ~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G 304 (447)
.++-.+..+.+ ++ .+-.-.+.++||...+.- -..+...+++|-+++|+ ..|+....
T Consensus 222 --aaVfA~MsrVn--KV-Iigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~V---lAp~yKLs 277 (353)
T KOG1465|consen 222 --AAVFAMMSRVN--KV-IIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIV---LAPMYKLS 277 (353)
T ss_pred --HHHHHHhhhcc--eE-EEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEE---ecchhhcC
Confidence 22333333211 11 111223778888776655 34567778899999885 45665544
No 401
>PLN02160 thiosulfate sulfurtransferase
Probab=45.04 E-value=39 Score=28.79 Aligned_cols=47 Identities=11% Similarity=0.085 Sum_probs=33.1
Q ss_pred HhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchh
Q 013235 152 SKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAG 200 (447)
Q Consensus 152 ~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~ 200 (447)
+.++.+...+++|.+|.-+..++..+... |-.++..+.|++.+|...
T Consensus 76 ~~~~~~~~IivyC~sG~RS~~Aa~~L~~~--G~~~v~~l~GG~~~W~~~ 122 (136)
T PLN02160 76 SLLNPADDILVGCQSGARSLKATTELVAA--GYKKVRNKGGGYLAWVDH 122 (136)
T ss_pred hccCCCCcEEEECCCcHHHHHHHHHHHHc--CCCCeeecCCcHHHHhhC
Confidence 33344556788999999888887766443 666788888888766543
No 402
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=44.79 E-value=42 Score=25.93 Aligned_cols=42 Identities=21% Similarity=0.366 Sum_probs=30.8
Q ss_pred CCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 154 MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 154 ~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
++.+...|++|.+|..+..++..+.+. |-+++..++|++.++
T Consensus 53 ~~~~~~ivv~c~~g~~s~~a~~~l~~~--G~~~v~~l~gG~~~w 94 (96)
T cd01444 53 LDRDRPVVVYCYHGNSSAQLAQALREA--GFTDVRSLAGGFEAW 94 (96)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHc--CCceEEEcCCCHHHh
Confidence 455566788899998888877766654 667788888887544
No 403
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=44.01 E-value=26 Score=31.24 Aligned_cols=52 Identities=10% Similarity=-0.002 Sum_probs=29.4
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCC----CChHHHHHHHHHHhCCEEEE
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA----PGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~----~~~l~~l~~l~~~~g~llI~ 293 (447)
++.+++.+.+. .++..||+||++...+.-.-+ ..+++.+.++|+++|+.+|+
T Consensus 129 ~~~l~~~~~~~--~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL--YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT------SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc--CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45566666541 257799999987664321101 24889999999999987664
No 404
>PLN02672 methionine S-methyltransferase
Probab=43.22 E-value=1.7e+02 Score=34.16 Aligned_cols=21 Identities=10% Similarity=0.061 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHhCCEEEEecc
Q 013235 276 YLPAVYKSIKKAGGLCIADEV 296 (447)
Q Consensus 276 ~l~~l~~l~~~~g~llI~DEv 296 (447)
-++.|.+.+++-|+.|++|+-
T Consensus 545 ~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 545 AFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred HHHHHHHHHHhhCcEEEEehh
Confidence 388999999999999999985
No 405
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=42.35 E-value=29 Score=31.70 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=27.0
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEE
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
.+++||+|=+.-.| .... ..++.+++++||+.+|
T Consensus 156 ~Pa~VicEi~~~dG-~mar----~~~~~~fa~~h~l~~i 189 (203)
T COG0108 156 KPAGVICEIMNDDG-TMAR----LPELEEFAKEHGLPVI 189 (203)
T ss_pred CCcEEEEEEeCCCc-cccC----hHHHHHHHHHcCCcEE
Confidence 67999999766544 4443 7889999999999887
No 406
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=41.43 E-value=51 Score=25.89 Aligned_cols=43 Identities=14% Similarity=0.229 Sum_probs=29.5
Q ss_pred HhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 152 SKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 152 ~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
..++.+...|++|.+|.-+..++-.+.+. |-+ +..+.|++.++
T Consensus 56 ~~~~~~~~ivv~C~~G~rs~~aa~~L~~~--G~~-~~~l~GG~~~W 98 (100)
T cd01523 56 DQLPDDQEVTVICAKEGSSQFVAELLAER--GYD-VDYLAGGMKAW 98 (100)
T ss_pred hhCCCCCeEEEEcCCCCcHHHHHHHHHHc--Cce-eEEeCCcHHhh
Confidence 33455556788899998887777665543 444 77888888654
No 407
>PRK00162 glpE thiosulfate sulfurtransferase; Validated
Probab=40.11 E-value=52 Score=26.33 Aligned_cols=51 Identities=10% Similarity=0.167 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCc
Q 013235 145 DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (447)
Q Consensus 145 elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~ 198 (447)
++.+.+.. ++.+...+++|.+|..+..++..+.+. |-+++..++|++-++.
T Consensus 47 ~l~~~~~~-~~~~~~ivv~c~~g~~s~~a~~~L~~~--G~~~v~~l~GG~~~w~ 97 (108)
T PRK00162 47 SLGAFMRQ-ADFDTPVMVMCYHGNSSQGAAQYLLQQ--GFDVVYSIDGGFEAWR 97 (108)
T ss_pred HHHHHHHh-cCCCCCEEEEeCCCCCHHHHHHHHHHC--CchheEEecCCHHHHH
Confidence 34444433 454556778888888777666554443 6667888999886554
No 408
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=39.76 E-value=1.9e+02 Score=23.15 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCC-EEEEecccc
Q 013235 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG-LCIADEVQA 298 (447)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~-llI~DEv~t 298 (447)
+..+++++.+....+- .+..-++-...........-.+-+++|.++++++++ ++|+|+--|
T Consensus 7 ~~~l~El~~L~~t~g~-~vv~~~~q~~~~~~p~~~iG~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 7 EESLEELEELAETAGY-EVVGTVVQKRRKPDPKTYIGSGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHHHHCCC-eEEEEEEecCCCCCcceeechhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 4447778777776543 444333332221111223356789999999999987 566776433
No 409
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=39.70 E-value=87 Score=29.01 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 235 DGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 235 d~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
|.+...+.++.++.+ ++-+||+.|..... +..+.+-|++.|+++|.
T Consensus 40 d~~~q~~~i~~~i~~----~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 40 DPEEQIEQIEQAISQ----GVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp THHHHHHHHHHHHHT----TESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred CHHHHHHHHHHHHHh----cCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 445556778888764 57799998876533 45566778899999886
No 410
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=39.64 E-value=3.8e+02 Score=26.37 Aligned_cols=42 Identities=17% Similarity=0.026 Sum_probs=29.8
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCc
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGf 300 (447)
-|.+..-..-+|.=.|.++..+.+..+++..|+ ++|=||+|-
T Consensus 244 ~v~~~~dy~~~~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtgK 285 (323)
T COG2515 244 DVLLSDDYHHPGYGKPNEEDIEAIKLLARLEGI--LLDPVYTGK 285 (323)
T ss_pred eEEEEecccCCccCCcCHHHHHHHHHHHHhhCc--ccccccchH
Confidence 333333333445556788999999999999986 579999984
No 411
>COG0216 PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis]
Probab=39.02 E-value=1.2e+02 Score=30.20 Aligned_cols=86 Identities=20% Similarity=0.289 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhC-CC---CCceEEE----cCCHHHHHHHHHHHHHhhcC-----
Q 013235 117 HPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM-PG---NLKVVFF----TNSGTEANELAIMMARLYTG----- 183 (447)
Q Consensus 117 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~-~~---~~~~v~~----~~sGseA~e~Aik~ar~~t~----- 183 (447)
+|++.+-+.+.+..+ .....+|.+.|..++ |. +.+.+++ +.+|.||.--|--+.|.|..
T Consensus 74 D~em~ema~~Ei~~~--------~~~~~~le~~L~~lLlPkDpnd~knvilEIRagtGGdEAalFagDLfrMY~rYAe~k 145 (363)
T COG0216 74 DPEMREMAEEEIKEL--------EAKIEELEEELKILLLPKDPNDDKNIILEIRAGTGGDEAALFAGDLFRMYSRYAESK 145 (363)
T ss_pred CHHHHHHHHHHHHHH--------HHHHHHHHHHHHHhcCCCCCCCCcCeEEEEecCCCchHHHHHHHHHHHHHHHHHHhC
Confidence 566666555555543 345567777777655 43 3344444 78899998888888887752
Q ss_pred --CCeEEEEcCCcccC-chhhhhccCCCCc
Q 013235 184 --CNDIISLRNAYHGN-AAGTMGATAQSNW 210 (447)
Q Consensus 184 --~~~ii~~~~~yHG~-~~~~~~~t~~~~~ 210 (447)
+-.|+....+=+|. ......+++...|
T Consensus 146 gWk~ei~s~se~~~GG~kEii~~I~G~gvy 175 (363)
T COG0216 146 GWKVEILSASESELGGYKEIIASISGKGVY 175 (363)
T ss_pred CCEEEEeecCcccCCCceEEEEEEeccchh
Confidence 34566666666663 3344455555444
No 412
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=38.51 E-value=60 Score=25.55 Aligned_cols=40 Identities=15% Similarity=0.322 Sum_probs=29.4
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCc
Q 013235 157 NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (447)
Q Consensus 157 ~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~ 198 (447)
+...|++|++|..|...+..+.+. |-.++..++|++.++.
T Consensus 58 ~~~vv~~c~~g~rs~~~~~~l~~~--G~~~v~~l~GG~~~w~ 97 (101)
T cd01528 58 DKDIVVLCHHGGRSMQVAQWLLRQ--GFENVYNLQGGIDAWS 97 (101)
T ss_pred CCeEEEEeCCCchHHHHHHHHHHc--CCccEEEecCCHHHHh
Confidence 456788899998887777666553 6667888899887653
No 413
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=38.10 E-value=71 Score=27.48 Aligned_cols=59 Identities=22% Similarity=0.202 Sum_probs=39.4
Q ss_pred HHHHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCchhhhhcc
Q 013235 144 ADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGAT 205 (447)
Q Consensus 144 ~elae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~~~~~~t 205 (447)
.+|.+.+.+ ++.+...|++|.+|.-|-.+|-.+... |..+|.+++|++.++......+.
T Consensus 37 ~~l~~~l~~-l~~~~~vVv~c~~g~~a~~aa~~L~~~--G~~~v~~L~GG~~aW~~~g~pl~ 95 (145)
T cd01535 37 AQLAQALEK-LPAAERYVLTCGSSLLARFAAADLAAL--TVKPVFVLEGGTAAWIAAGLPVE 95 (145)
T ss_pred HHHHHHHHh-cCCCCCEEEEeCCChHHHHHHHHHHHc--CCcCeEEecCcHHHHHHCCCCcc
Confidence 455555555 454556788888887666665554433 66789999999998877555443
No 414
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=37.05 E-value=1.2e+02 Score=27.43 Aligned_cols=82 Identities=20% Similarity=0.289 Sum_probs=41.6
Q ss_pred ecCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccc-hHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHH
Q 013235 95 DENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (447)
Q Consensus 95 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~-~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~ 173 (447)
+.+|.++||+++|.+.+ | .||+.+.+... ...-.+ ....-+.+-+. .+.......++-+... .
T Consensus 41 ~i~g~~~LDlFAGSGaL--G------lEAlSRGA~~~---~~vE~~~~a~~~l~~N~~-~l~~~~~~~~~~~da~----~ 104 (187)
T COG0742 41 EIEGARVLDLFAGSGAL--G------LEALSRGAARV---VFVEKDRKAVKILKENLK-ALGLEGEARVLRNDAL----R 104 (187)
T ss_pred ccCCCEEEEecCCccHh--H------HHHHhCCCceE---EEEecCHHHHHHHHHHHH-HhCCccceEEEeecHH----H
Confidence 46899999999998844 4 34444433321 111112 22333444433 3332233334444333 3
Q ss_pred HHHHHHhhcCC--CeEEEEcCCcc
Q 013235 174 AIMMARLYTGC--NDIISLRNAYH 195 (447)
Q Consensus 174 Aik~ar~~t~~--~~ii~~~~~yH 195 (447)
+++ ....+ -++|.+|+-||
T Consensus 105 ~L~---~~~~~~~FDlVflDPPy~ 125 (187)
T COG0742 105 ALK---QLGTREPFDLVFLDPPYA 125 (187)
T ss_pred HHH---hcCCCCcccEEEeCCCCc
Confidence 333 23333 68888888887
No 415
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.50 E-value=2.9e+02 Score=24.22 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCCCceEEEcCCHHHHHHHHHH
Q 013235 145 DFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (447)
Q Consensus 145 elae~L~~~~~~~~~~v~~~~sGseA~e~Aik 176 (447)
.+++.|.+.++.+.+..-++-+|..+.+..=+
T Consensus 28 ~l~~~l~~~~~~~~~~~n~g~~G~t~~~~~~~ 59 (191)
T cd01836 28 QLARGLAAITGRGVRWRLFAKTGATSADLLRQ 59 (191)
T ss_pred HHHHHHHHhhCCceEEEEEecCCcCHHHHHHH
Confidence 35666666554345555566677766554433
No 416
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=35.89 E-value=1e+02 Score=24.88 Aligned_cols=52 Identities=13% Similarity=0.210 Sum_probs=32.6
Q ss_pred HHHHHHHHHhC-CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 144 ADFAEALASKM-PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 144 ~elae~L~~~~-~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
.++.+.+.+.- ..+...|++|++|.-|..++..+.. .|-+++..++|++-++
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~--~G~~~v~~l~GG~~~W 116 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALEL--LGYKNVRLYDGSWSEW 116 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHH--cCCCCeeeeCChHHHh
Confidence 45555555542 2344678889998877776655432 2656778888877543
No 417
>smart00642 Aamy Alpha-amylase domain.
Probab=35.86 E-value=65 Score=28.48 Aligned_cols=47 Identities=13% Similarity=-0.085 Sum_probs=32.7
Q ss_pred CeEEEEEccccCCCc-------eee----------CCCChHHHHHHHHHHhCCEEEEeccccCc
Q 013235 254 HVAGFLSESIQGVGG-------IIE----------LAPGYLPAVYKSIKKAGGLCIADEVQAGF 300 (447)
Q Consensus 254 ~~aavi~Epi~~~gG-------~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tGf 300 (447)
.+-+|.+.|++.... .-+ -+.+-++++.+.|+++|+-+|+|=|....
T Consensus 32 G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 32 GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 467888898754331 110 01245899999999999999999887643
No 418
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=34.76 E-value=2.4e+02 Score=25.86 Aligned_cols=57 Identities=7% Similarity=0.099 Sum_probs=34.0
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCc-eeeCC----------CChHHHHHHHHHHhCCEEE-Eecccc
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGG-IIELA----------PGYLPAVYKSIKKAGGLCI-ADEVQA 298 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG-~~~~~----------~~~l~~l~~l~~~~g~llI-~DEv~t 298 (447)
++.+++.+.+. .++..+|+|++...-. ..... ..++..|.++|+++++.+| ..++..
T Consensus 103 l~~l~~~l~~~--~~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~tn~~~~ 171 (235)
T cd01123 103 LEELEAILIES--SRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVITNQVTA 171 (235)
T ss_pred HHHHHHHHhhc--CCeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeccEee
Confidence 34455555432 2788999999875311 01111 1356788899999998765 455544
No 419
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=34.70 E-value=74 Score=25.46 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=25.8
Q ss_pred CceEEEcCCHHHHHHHHHHHHHhhcCCCe-EEEEcCCcccCc
Q 013235 158 LKVVFFTNSGTEANELAIMMARLYTGCND-IISLRNAYHGNA 198 (447)
Q Consensus 158 ~~~v~~~~sGseA~e~Aik~ar~~t~~~~-ii~~~~~yHG~~ 198 (447)
...|++|.+|..+..++..+.+. |-++ +..++|++.++.
T Consensus 67 ~~ivv~C~~G~rs~~a~~~L~~~--G~~~~v~~l~gG~~~W~ 106 (109)
T cd01533 67 TPIVVNCAGRTRSIIGAQSLINA--GLPNPVAALRNGTQGWT 106 (109)
T ss_pred CeEEEECCCCchHHHHHHHHHHC--CCCcceeEecCCHHHHH
Confidence 45688898998876655544332 5444 778888886553
No 420
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=33.41 E-value=1.4e+02 Score=22.87 Aligned_cols=48 Identities=15% Similarity=0.360 Sum_probs=30.2
Q ss_pred HHHHHHHhCCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 146 FAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 146 lae~L~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
+.+.+.. ++.+...|++|.+|..+..++..+.+. |- ++..++|++-++
T Consensus 41 ~~~~~~~-~~~~~~vvl~c~~g~~a~~~a~~L~~~--G~-~v~~l~GG~~~w 88 (90)
T cd01524 41 LRDRLNE-LPKDKEIIVYCAVGLRGYIAARILTQN--GF-KVKNLDGGYKTY 88 (90)
T ss_pred HHHHHHh-cCCCCcEEEEcCCChhHHHHHHHHHHC--CC-CEEEecCCHHHh
Confidence 4444433 344456788888887777776655433 54 788888887443
No 421
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=33.34 E-value=3.2e+02 Score=23.82 Aligned_cols=57 Identities=12% Similarity=0.056 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHccCC--CCeEEEEEccccCC-Cce----------eeCC----CChHHHHHHHHHHhCCEEE
Q 013235 236 GEMYAKDVQDLIDFGTS--GHVAGFLSESIQGV-GGI----------IELA----PGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 236 ~~~~~~~le~~i~~~~~--~~~aavi~Epi~~~-gG~----------~~~~----~~~l~~l~~l~~~~g~llI 292 (447)
.+.+.+.++++++.... .....+++.|..-. ... .... ..|-+.++++|+++|+.+|
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i 160 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLSPKTKVILITPPPVDEEAWEKSLEDGGSQPGRTNELLKQYAEACVEVAEELGVPVI 160 (199)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHhhhhccccCCccccHHHHHHHHHHHHHHHHHhCCcEE
Confidence 34455666666654321 24556777764322 110 0001 1355578899999997777
No 422
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=33.17 E-value=1.3e+02 Score=26.62 Aligned_cols=64 Identities=22% Similarity=0.307 Sum_probs=43.3
Q ss_pred eEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCc-cccCCCcccccccCCCCCEE-Eee
Q 013235 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF-ARTGSHFWGFEAHGVVPDIV-TMA 323 (447)
Q Consensus 255 ~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGf-gr~G~~~~~~~~~gv~pDiv-t~s 323 (447)
..-+|+|.+.|.|-. .+..+.++++.+.+.+.+.++|.=|+-+|+ .-||. . ...-+.+|.. ||+
T Consensus 99 ~~dlIIDal~G~G~~-~~l~~~~~~~i~~iN~~~~~viAiDiPSGl~~dtG~-~---~~~~v~Ad~Tvt~g 164 (169)
T PF03853_consen 99 PADLIIDALFGTGFS-GPLRGPIAELIDWINASRAPVIAIDIPSGLDADTGE-V---DGPAVRADYTVTFG 164 (169)
T ss_dssp CESEEEEES-STTGG-SCGSTCHHHHHHHHHHHCSEEEEESS-TTCBTTTB--B---SSSS---SEEEEES
T ss_pred cccEEEEecccCCCC-CCcCHHHHHHHHHHhccCCcEEEecCCCCccCCCCC-c---CCCEEEcceeeecC
Confidence 367899999999643 445667899999999999999999999998 44562 2 2233677865 554
No 423
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=33.00 E-value=62 Score=28.06 Aligned_cols=55 Identities=7% Similarity=0.033 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHccCCCCeEEEEEccc-cCCCceeeCCCChHHHHHHHHHHhCCEEE
Q 013235 237 EMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~aavi~Epi-~~~gG~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
+.+.+.++++++.........+++.+. ....+. ..-..+-+.++++|+++++.+|
T Consensus 84 ~~~~~~l~~li~~~~~~~~~vil~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 84 DQTRANLRQMIETAQARGAPVLLVGMQAPPNYGP-RYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCccch-HHHHHHHHHHHHHHHHcCCcEe
Confidence 444556666665432223345555442 222111 1124566788899999998666
No 424
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=32.41 E-value=1.1e+02 Score=23.80 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=26.2
Q ss_pred CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 158 ~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
...|++|.+|..+...|..+... |-+ +..++|++.++
T Consensus 57 ~~iv~~c~~G~rs~~aa~~L~~~--G~~-v~~l~GG~~~W 93 (95)
T cd01534 57 ARIVLADDDGVRADMTASWLAQM--GWE-VYVLEGGLAAA 93 (95)
T ss_pred CeEEEECCCCChHHHHHHHHHHc--CCE-EEEecCcHHHh
Confidence 45788899998887777665332 545 77788888654
No 425
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=32.29 E-value=1.2e+02 Score=28.08 Aligned_cols=51 Identities=12% Similarity=-0.023 Sum_probs=31.7
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCC------ChHHHHHHHHHHhCCEEEE
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAP------GYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~------~~l~~l~~l~~~~g~llI~ 293 (447)
.+.++++..+. ++..||+|+++..--...... .+++.|+++|+++|+.+|+
T Consensus 112 ~~~i~~~~~~~---~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 112 RSRARRLKKEH---GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred HHHHHHHHHhc---CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 34444444332 567899999875421000011 3578899999999998775
No 426
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=31.67 E-value=92 Score=29.70 Aligned_cols=50 Identities=14% Similarity=0.027 Sum_probs=36.4
Q ss_pred HHHHHHHccCCCCeEEEEEccccCCCce--eeCCCChHHHHHHHHHHhCCEEE
Q 013235 242 DVQDLIDFGTSGHVAGFLSESIQGVGGI--IELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 242 ~le~~i~~~~~~~~aavi~Epi~~~gG~--~~~~~~~l~~l~~l~~~~g~llI 292 (447)
.|.+.+... +...-.+|++|..|+|.. ..+...|...|.+|-+..|+.+|
T Consensus 20 ~l~~a~~~~-p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 20 PLYDAIAAH-PSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred HHHHHHhcC-CCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 454555543 556679999999999843 34788999999999766676555
No 427
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=31.62 E-value=79 Score=24.90 Aligned_cols=50 Identities=12% Similarity=0.331 Sum_probs=29.6
Q ss_pred HHHHHHHHhC-CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCccc
Q 013235 145 DFAEALASKM-PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHG 196 (447)
Q Consensus 145 elae~L~~~~-~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG 196 (447)
++.+.+.... +.+...|++|++|.-+..++..+.+. |-+++..++|++-+
T Consensus 53 ~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v~~~~Gg~~~ 103 (106)
T cd01519 53 EFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSL--GYENVGNYPGSWLD 103 (106)
T ss_pred HHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHc--CCccceecCCcHHH
Confidence 3444443332 22456788889988776666555433 65667777776643
No 428
>PRK10949 protease 4; Provisional
Probab=30.91 E-value=83 Score=34.19 Aligned_cols=50 Identities=14% Similarity=0.192 Sum_probs=33.9
Q ss_pred HHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 239 YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 239 ~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
..+.|+++.+ .+++.+|++. |++.||......+..++|.++ |+.|-++|+
T Consensus 352 ~~~~l~~a~~---D~~vkaVvLr-InSpGGs~~ase~i~~~i~~~-r~~gKPVva 401 (618)
T PRK10949 352 TAAQIRDARL---DPKVKAIVLR-VNSPGGSVTASEVIRAELAAA-RAAGKPVVV 401 (618)
T ss_pred HHHHHHHHHh---CCCCcEEEEE-ecCCCCcHHHHHHHHHHHHHH-HhcCCcEEE
Confidence 3444544433 3588999887 667888887766666777765 566777775
No 429
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=30.85 E-value=97 Score=27.22 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=31.4
Q ss_pred HHHHHHHhCC--CCCceEEEcCCHH-HHHHHHHHHHHhhcCCCeEEEEcCCcccCch
Q 013235 146 FAEALASKMP--GNLKVVFFTNSGT-EANELAIMMARLYTGCNDIISLRNAYHGNAA 199 (447)
Q Consensus 146 lae~L~~~~~--~~~~~v~~~~sGs-eA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~ 199 (447)
+.+.+.+..+ .+...|++|.+|. -+..++-.+.+. |-+++..++|++.+|..
T Consensus 103 ~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~--G~~~V~~l~GG~~aW~~ 157 (162)
T TIGR03865 103 FRRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAY--GYSNVYWYPDGTDGWQA 157 (162)
T ss_pred HHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhc--CCcceEEecCCHHHHHH
Confidence 4444544332 3345778888875 444444433332 77788899999987753
No 430
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=30.42 E-value=4.3e+02 Score=27.79 Aligned_cols=43 Identities=12% Similarity=-0.010 Sum_probs=27.7
Q ss_pred HHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEE
Q 013235 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 241 ~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
.+|.++++.....++.+|++||.++.. .+.+..++++.|+.++
T Consensus 407 ~~L~~Li~~IK~~~V~~IF~Epq~~~~---------~~~l~~IA~e~Gv~V~ 449 (479)
T TIGR03772 407 ADRRRLTRTIENLKVPAVFLEPNLAAR---------STTLNEIADELGVRVC 449 (479)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc---------hHHHHHHHHHcCCcEE
Confidence 344444433334588999999976531 4557888899998653
No 431
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.22 E-value=4.8e+02 Score=24.72 Aligned_cols=30 Identities=7% Similarity=0.029 Sum_probs=19.1
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEE
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI 292 (447)
..++.++++||..+. +.+..++++.|+-++
T Consensus 215 ~~~v~~if~e~~~~~-----------~~~~~la~~~g~~v~ 244 (266)
T cd01018 215 EKGVRVVFVQPQFST-----------KSAEAIAREIGAKVV 244 (266)
T ss_pred HcCCCEEEEcCCCCc-----------HHHHHHHHHcCCeEE
Confidence 346778888875432 234577777777654
No 432
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]
Probab=30.11 E-value=31 Score=35.16 Aligned_cols=76 Identities=21% Similarity=0.351 Sum_probs=53.7
Q ss_pred EEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCC-CCCEEEeeccccC---Ccc-
Q 013235 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMAKGIGN---GIP- 331 (447)
Q Consensus 257 avi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv-~pDivt~sK~lg~---G~p- 331 (447)
.-+.|--.|+ ...|...++.|-++.+..|--+|+ .||.|.. .+|+.++|.. .|.-.+.|-+||. |+|
T Consensus 461 ~sf~~~tpGe---~ikPQ~vIk~Ldk~t~d~~~kvii---tTGVGqH--QMWAAqfy~w~kP~~~~tSGGLGtMGfGLPA 532 (675)
T KOG4166|consen 461 LSFKEETPGE---AIKPQYVIKVLDKLTDDTGRKVII---TTGVGQH--QMWAAQFYNWKKPRQWLTSGGLGTMGFGLPA 532 (675)
T ss_pred eeeeccCCcc---ccChHHHHHHHHHhccCcCceEEE---eccccHH--HHHHHHHhcccCccceeecCCccccccCcch
Confidence 3444544443 455777788888888887766664 4787765 5999998886 6888888888883 565
Q ss_pred -ccccccCHH
Q 013235 332 -LGAVVTTPE 340 (447)
Q Consensus 332 -igav~~~~~ 340 (447)
||+-+++++
T Consensus 533 AIGAsVA~P~ 542 (675)
T KOG4166|consen 533 AIGASVANPD 542 (675)
T ss_pred hhcccccCcc
Confidence 677776654
No 433
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.99 E-value=83 Score=27.53 Aligned_cols=57 Identities=18% Similarity=0.070 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHcc--CCCCeEEEEEccccCCCcee---------eCCCChHHHHHHHHHHhCCEEE
Q 013235 236 GEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGII---------ELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 236 ~~~~~~~le~~i~~~--~~~~~aavi~Epi~~~gG~~---------~~~~~~l~~l~~l~~~~g~llI 292 (447)
.+.+.+.++++++.. .......+++.|........ ..-..|-+.++++|+++++.+|
T Consensus 84 ~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 84 LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 444556666666543 22234466677654332211 1112345667888999997777
No 434
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=29.97 E-value=2.6e+02 Score=27.82 Aligned_cols=37 Identities=14% Similarity=0.027 Sum_probs=23.7
Q ss_pred eEEEE--EccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 255 VAGFL--SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 255 ~aavi--~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
+-.|| .|-|..+||++.- -+- -.+.-+|++||+++++
T Consensus 216 Vd~VivGAd~I~aNG~v~NK-iGT-~~lAl~Ak~~~VPfyV 254 (329)
T PRK06371 216 IDLVIVGADRIASNGDFANK-IGT-YEKAVLAKVNGIPFYV 254 (329)
T ss_pred CCEEEECccEEecCCCEeeh-hhH-HHHHHHHHHcCCCEEE
Confidence 33444 4667777776653 222 2466778999999885
No 435
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=29.86 E-value=66 Score=25.10 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=28.9
Q ss_pred CCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 154 MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 154 ~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
++.+...|++|++|..+-.++..+.+. |..++..++|++-++
T Consensus 51 ~~~~~~iv~~c~~g~~s~~~~~~L~~~--g~~~v~~l~gG~~~W 92 (99)
T cd01527 51 LVGANAIIFHCRSGMRTQQNAERLAAI--SAGEAYVLEGGLDAW 92 (99)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHc--CCccEEEeeCCHHHH
Confidence 344556788899998877777776654 444677788876443
No 436
>PRK09875 putative hydrolase; Provisional
Probab=29.84 E-value=3.3e+02 Score=26.50 Aligned_cols=68 Identities=24% Similarity=0.231 Sum_probs=43.7
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcc-cccccCCCCCEEEeec
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW-GFEAHGVVPDIVTMAK 324 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~-~~~~~gv~pDivt~sK 324 (447)
-.|+||-|---+.+...+.....++...+..++.|+++++ +|+.++.|.+.. -.+..|+.|+-|+++=
T Consensus 118 ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~---Ht~~~~~g~e~l~il~e~Gvd~~rvvi~H 186 (292)
T PRK09875 118 LKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPIST---HTSFSTMGLEQLALLQAHGVDLSRVTVGH 186 (292)
T ss_pred CcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEE---cCCCccchHHHHHHHHHcCcCcceEEEeC
Confidence 3467765754444445555567888888889999999985 466655442111 1244688888888754
No 437
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=28.50 E-value=46 Score=30.84 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHHhCCEEEEec-cccCccccCCCcccccccCCC-CCEEEeeccccCCccccccccCHHHHH
Q 013235 275 GYLPAVYKSIKKAGGLCIADE-VQAGFARTGSHFWGFEAHGVV-PDIVTMAKGIGNGIPLGAVVTTPEIAE 343 (447)
Q Consensus 275 ~~l~~l~~l~~~~g~llI~DE-v~tGfgr~G~~~~~~~~~gv~-pDivt~sK~lg~G~pigav~~~~~i~~ 343 (447)
+..++++++|++||+.||+++ +.-.. +.|... =|.|.. -++-...|-++.++.||+-+.+.+-+.
T Consensus 52 ~~a~~~~~lc~~~~v~liINd~~dlA~-~~~AdG---VHlGq~D~~~~~ar~~~~~~~iIG~S~h~~eea~ 118 (211)
T COG0352 52 ALAEKLRALCQKYGVPLIINDRVDLAL-AVGADG---VHLGQDDMPLAEARELLGPGLIIGLSTHDLEEAL 118 (211)
T ss_pred HHHHHHHHHHHHhCCeEEecCcHHHHH-hCCCCE---EEcCCcccchHHHHHhcCCCCEEEeecCCHHHHH
Confidence 446799999999999988876 22111 122110 122332 122234466667777887777655443
No 438
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=27.50 E-value=4.7e+02 Score=23.76 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=22.7
Q ss_pred CCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 251 ~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
.++++..+|-- .|... -+.++.+.++++|+.+|.
T Consensus 108 ~~gDvli~iS~-----SG~s~----~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 108 HAGDVLLAIST-----RGNSR----DIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred CCCCEEEEEeC-----CCCCH----HHHHHHHHHHHCCCEEEE
Confidence 35677666532 22222 278889999999999883
No 439
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=27.46 E-value=1.1e+02 Score=23.69 Aligned_cols=41 Identities=12% Similarity=-0.005 Sum_probs=28.2
Q ss_pred CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 155 PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 155 ~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
+.+...|++|++|..+-..+..+.+ .|-++|..++|++-++
T Consensus 54 ~~~~~ivv~c~~g~~s~~~~~~l~~--~G~~~v~~l~GG~~~W 94 (96)
T cd01529 54 GRATRYVLTCDGSLLARFAAQELLA--LGGKPVALLDGGTSAW 94 (96)
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHH--cCCCCEEEeCCCHHHh
Confidence 4445678889998888776665533 2556788888887654
No 440
>PRK05954 precorrin-8X methylmutase; Provisional
Probab=27.38 E-value=1.5e+02 Score=27.18 Aligned_cols=48 Identities=31% Similarity=0.463 Sum_probs=29.7
Q ss_pred CCCCCEEEeeccccCCccccccccCHHHHHhhcC--Ccc---cccCCCChHHHHHHHHHHH
Q 013235 314 GVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR--RNY---FNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 314 gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~--~~~---~~T~~~np~a~aaala~L~ 369 (447)
++.|.+|+ |+|+|+|-..+ -.+.|.+ ..+ -++-||+|++.++..+-+.
T Consensus 145 ~~~PalVI-------g~PVGFV~A~E-SKe~L~~~~iP~It~~GrkGGS~vAaAivNALl~ 197 (203)
T PRK05954 145 RVKPSLVI-------GVPVGFVSVVE-AKQALAQLDVPQIRVEGRKGGSPVAAAIVNALLI 197 (203)
T ss_pred CCCCCEEE-------EECCcccCHHH-HHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHH
Confidence 36777764 67888876532 1222222 122 2788899999888777663
No 441
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=27.04 E-value=2e+02 Score=28.02 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=39.3
Q ss_pred HHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCcccc
Q 013235 239 YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART 303 (447)
Q Consensus 239 ~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~ 303 (447)
..+++++.+.+ ..+.++-+.|.... ..+.+..+..+.+.|.++|+++++ +||.+-.
T Consensus 114 a~~E~er~v~~---~gf~g~~l~p~~~~---~~~~~~~~~pi~~~a~~~gvpv~i---htG~~~~ 169 (293)
T COG2159 114 AAEELERRVRE---LGFVGVKLHPVAQG---FYPDDPRLYPIYEAAEELGVPVVI---HTGAGPG 169 (293)
T ss_pred HHHHHHHHHHh---cCceEEEecccccC---CCCCChHHHHHHHHHHHcCCCEEE---EeCCCCC
Confidence 45677777764 25678888874322 234555689999999999999999 7776433
No 442
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=26.83 E-value=5.6e+02 Score=24.40 Aligned_cols=106 Identities=13% Similarity=0.077 Sum_probs=52.8
Q ss_pred ceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCch-hhhhccCCCCccccccCCCeEeecCCCCcCCCCCCChH
Q 013235 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGE 237 (447)
Q Consensus 159 ~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~~-~~~~~t~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~ 237 (447)
..++++-|-|..++.+++.|.....+-+|++.+..-++... .+..+. ..|+.....|+
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~----------~~gi~v~~i~d----------- 166 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELA----------EAGIPVTLIPD----------- 166 (282)
T ss_dssp TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHH----------HTT-EEEEE-G-----------
T ss_pred CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhh----------hcceeEEEEec-----------
Confidence 44667888888899999887654445677777655433221 111111 12443333322
Q ss_pred HHHHHHHHHHHc-cCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 238 MYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 238 ~~~~~le~~i~~-~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
..+-..+.. . +...+=.|.+..+||++.. -+- ..+.-+|+++++++++
T Consensus 167 ---~~~~~~m~~~v---d~VliGad~v~~nG~v~nk-~Gt-~~~a~~Ak~~~vPv~v 215 (282)
T PF01008_consen 167 ---SAVGYVMPRDV---DKVLIGADAVLANGGVVNK-VGT-LQLALAAKEFNVPVYV 215 (282)
T ss_dssp ---GGHHHHHHCTE---SEEEEE-SEEETTS-EEEE-TTH-HHHHHHHHHTT-EEEE
T ss_pred ---hHHHHHHHHhC---CeeEEeeeEEecCCCEeeh-hhH-HHHHHHHHhhCCCEEE
Confidence 123233332 1 3334445668888877763 333 2456688999998875
No 443
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=25.84 E-value=1.3e+02 Score=29.58 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=34.8
Q ss_pred HHHHHHHHHh-CCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCc
Q 013235 144 ADFAEALASK-MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (447)
Q Consensus 144 ~elae~L~~~-~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~ 198 (447)
.+|.+.+.+. ++.+...|++|++|--|...+..+- .-|.+++-.++|+|..|.
T Consensus 255 ~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~--~~G~~~v~~YdGs~~eW~ 308 (320)
T PLN02723 255 EELKKRFEQEGISLDSPIVASCGTGVTACILALGLH--RLGKTDVPVYDGSWTEWG 308 (320)
T ss_pred HHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHH--HcCCCCeeEeCCCHHHHh
Confidence 5566666543 2334567888999987766555443 337677888999987664
No 444
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=25.76 E-value=87 Score=23.73 Aligned_cols=41 Identities=22% Similarity=0.404 Sum_probs=28.4
Q ss_pred CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCc
Q 013235 156 GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (447)
Q Consensus 156 ~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~ 198 (447)
.+...|++|.+|..+..++..+... |.+.+..++|+|-++.
T Consensus 55 ~~~~iv~~c~~g~~a~~~~~~l~~~--G~~~v~~l~GG~~~w~ 95 (100)
T smart00450 55 KDKPVVVYCRSGNRSAKAAWLLREL--GFKNVYLLDGGYKEWS 95 (100)
T ss_pred CCCeEEEEeCCCcHHHHHHHHHHHc--CCCceEEecCCHHHHH
Confidence 3456788888988886666655443 6666888899886543
No 445
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=25.43 E-value=2.1e+02 Score=22.90 Aligned_cols=50 Identities=16% Similarity=0.313 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCC-CCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCccc
Q 013235 144 ADFAEALASKMP-GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHG 196 (447)
Q Consensus 144 ~elae~L~~~~~-~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG 196 (447)
.++.+.+.+..+ .+...+++|++|..+...+..+.+. |-+.+.. .|++..
T Consensus 44 ~~l~~~l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~--G~~~v~~-~GG~~~ 94 (101)
T TIGR02981 44 KEIKEHIATAVPDKNDTVKLYCNAGRQSGMAKDILLDM--GYTHAEN-AGGIKD 94 (101)
T ss_pred HHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHc--CCCeEEe-cCCHHH
Confidence 345455544432 2234568899999888887765544 5455544 365543
No 446
>PRK13936 phosphoheptose isomerase; Provisional
Probab=25.41 E-value=5.1e+02 Score=23.39 Aligned_cols=17 Identities=6% Similarity=0.016 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhCCEEEE
Q 013235 277 LPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 277 l~~l~~l~~~~g~llI~ 293 (447)
+-++.+.++++|+.+|.
T Consensus 127 ~~~~~~~ak~~g~~iI~ 143 (197)
T PRK13936 127 VIQAIQAAHEREMHVVA 143 (197)
T ss_pred HHHHHHHHHHCCCeEEE
Confidence 77889999999998883
No 447
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=25.36 E-value=1.3e+02 Score=28.66 Aligned_cols=56 Identities=9% Similarity=0.038 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
+..++.+.+++++... +-+-+|+=|-....|....+..+++++.++|+++++.+|+
T Consensus 22 ~~nl~~~~~~i~~a~~-~ga~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 22 QATLDRYLDLTRELAD-EKPDLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred HHHHHHHHHHHhhccc-CCCCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 3334445555543322 1234555565555555444557899999999999998874
No 448
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=25.31 E-value=1.3e+02 Score=24.36 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=31.0
Q ss_pred HHHHHHHHHHh-CCCCCceEEEcCCH-HHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 143 IADFAEALASK-MPGNLKVVFFTNSG-TEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 143 ~~elae~L~~~-~~~~~~~v~~~~sG-seA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
..++.+.+.+. .+.+...|++|++| ..|-..+..+.. .|-+++..++|++.++
T Consensus 64 ~~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~--~G~~~v~~l~GG~~~W 118 (122)
T cd01448 64 PEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRY--FGHENVRVLDGGLQAW 118 (122)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHH--cCCCCEEEecCCHHHH
Confidence 34555555543 23344567778784 555555444332 2667788889988654
No 449
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=25.12 E-value=64 Score=34.97 Aligned_cols=31 Identities=29% Similarity=0.316 Sum_probs=27.9
Q ss_pred CChHHHHHHHHHHhCCEEEEeccccCccccC
Q 013235 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (447)
Q Consensus 274 ~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G 304 (447)
|+-|+++.+-|+++||-||+|=|+.-|+..|
T Consensus 213 Pedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 213 PEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred HHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 4568999999999999999999999998766
No 450
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=24.86 E-value=1.2e+02 Score=26.56 Aligned_cols=56 Identities=9% Similarity=0.118 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHccCCCCeEEEEEccccCCCceee--------CCCChHHHHHHHHHHhCCEEE
Q 013235 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIE--------LAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~--------~~~~~l~~l~~l~~~~g~llI 292 (447)
+.+.+.++++++.........|++.|.+...-... .-..|-+.++++|+++++.+|
T Consensus 79 ~~~~~~~~~li~~~~~~~~~~il~~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~v~~v 142 (183)
T cd04501 79 EMIKDNIRSMVELAEANGIKVILASPLPVDDYPWKPQWLRPANKLKSLNRWLKDYARENGLLFL 142 (183)
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCcCccccchhhcchHHHHHHHHHHHHHHHHHcCCCEE
Confidence 34455566555543222334555655432211111 112456678899999987666
No 451
>cd01125 repA Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.
Probab=24.83 E-value=93 Score=29.01 Aligned_cols=40 Identities=10% Similarity=0.188 Sum_probs=25.9
Q ss_pred CeEEEEEccccCCCceeeCC----CChHHHHHHHHHHhCCEEEE
Q 013235 254 HVAGFLSESIQGVGGIIELA----PGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~----~~~l~~l~~l~~~~g~llI~ 293 (447)
++..+|+||+..-.+....+ ..+++.|.++++++|+.+|+
T Consensus 111 ~~~lvviDpl~~~~~~~~~d~~~~~~~~~~L~~~a~~~g~avl~ 154 (239)
T cd01125 111 RIDLVVIDPLVSFHGVSENDNGAMDAVIKALRRIAAQTGAAILL 154 (239)
T ss_pred CCCEEEECChHHhCCCCcCCHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 56799999976532111111 23678888999988876554
No 452
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=24.56 E-value=5.2e+02 Score=25.10 Aligned_cols=58 Identities=22% Similarity=0.200 Sum_probs=40.3
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhC-CEEEEeccccCccc
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG-GLCIADEVQAGFAR 302 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g-~llI~DEv~tGfgr 302 (447)
.+.|.+++.. . . .-++.|.+-|.|..+.-.-+-|+++.+++++.. +-+.+|=.++ |.+
T Consensus 124 ~~~Ln~~~~~--~-~-v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~-~Aa 182 (280)
T COG0648 124 AEALNELLEE--E-G-VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA-FAA 182 (280)
T ss_pred HHHHHHHhhc--c-C-CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh-hhc
Confidence 4445555542 1 2 455667777777666666788999999999997 8899997775 443
No 453
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH. They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle [].; GO: 0008168 methyltransferase activity, 0031167 rRNA methylation; PDB: 3P9N_A 2ESR_B 2IFT_A 1WS6_A 2FPO_B 2FHP_A.
Probab=24.28 E-value=2.4e+02 Score=25.33 Aligned_cols=85 Identities=20% Similarity=0.192 Sum_probs=36.7
Q ss_pred cCCCeEEEecCCcccccCCCCCHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHhCCCCCceEEEcCCHHHHHHHHH
Q 013235 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (447)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~elae~L~~~~~~~~~~v~~~~sGseA~e~Ai 175 (447)
.+|..+||+++|.|++ | .||+.+-++. ....-.++......++=.+.+....+..++......+..
T Consensus 41 ~~g~~vLDLFaGSGal--G------lEALSRGA~~---v~fVE~~~~a~~~i~~N~~~l~~~~~~~v~~~d~~~~l~--- 106 (183)
T PF03602_consen 41 LEGARVLDLFAGSGAL--G------LEALSRGAKS---VVFVEKNRKAIKIIKKNLEKLGLEDKIRVIKGDAFKFLL--- 106 (183)
T ss_dssp HTT-EEEETT-TTSHH--H------HHHHHTT-SE---EEEEES-HHHHHHHHHHHHHHT-GGGEEEEESSHHHHHH---
T ss_pred cCCCeEEEcCCccCcc--H------HHHHhcCCCe---EEEEECCHHHHHHHHHHHHHhCCCcceeeeccCHHHHHH---
Confidence 6899999999999854 4 3343332222 112222333333333333334332233344444333332
Q ss_pred HHHHhhcCCCeEEEEcCCcc
Q 013235 176 MMARLYTGCNDIISLRNAYH 195 (447)
Q Consensus 176 k~ar~~t~~~~ii~~~~~yH 195 (447)
+.. ....+-++|.+++-|.
T Consensus 107 ~~~-~~~~~fDiIflDPPY~ 125 (183)
T PF03602_consen 107 KLA-KKGEKFDIIFLDPPYA 125 (183)
T ss_dssp HHH-HCTS-EEEEEE--STT
T ss_pred hhc-ccCCCceEEEECCCcc
Confidence 221 1235568888888774
No 454
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=24.06 E-value=58 Score=26.69 Aligned_cols=25 Identities=12% Similarity=0.170 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHHhCC-EEEEecccc
Q 013235 274 PGYLPAVYKSIKKAGG-LCIADEVQA 298 (447)
Q Consensus 274 ~~~l~~l~~l~~~~g~-llI~DEv~t 298 (447)
.+.++.+.+..++++. ++|+||++-
T Consensus 73 ~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 73 DELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp HHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 4456888888888887 999999986
No 455
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=23.99 E-value=1.3e+02 Score=28.83 Aligned_cols=54 Identities=13% Similarity=0.058 Sum_probs=38.8
Q ss_pred HHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccc
Q 013235 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (447)
Q Consensus 240 ~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 297 (447)
++.+++++++.+++-+-++.... .-.-+-.|+-+++|..+|..|+++-|+..+|
T Consensus 143 leav~~~iee~g~dcilci~stt----scfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 143 LEAVEAIIEELGEDCILCIHSTT----SCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred HHHHHHHHHHhCCceEEEEeecc----cccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 55677788876665454544332 1123456788999999999999999999987
No 456
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=23.88 E-value=1e+02 Score=24.24 Aligned_cols=41 Identities=12% Similarity=0.268 Sum_probs=27.5
Q ss_pred CCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccC
Q 013235 155 PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (447)
Q Consensus 155 ~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~ 197 (447)
+.+...|++|.+|.-+..++..+... |-+++..++|++.++
T Consensus 59 ~~~~~ivvyC~~G~rs~~a~~~L~~~--G~~~v~~l~GG~~~W 99 (101)
T cd01518 59 LKGKKVLMYCTGGIRCEKASAYLKER--GFKNVYQLKGGILKY 99 (101)
T ss_pred cCCCEEEEECCCchhHHHHHHHHHHh--CCcceeeechhHHHH
Confidence 33456788888998887766654332 556788888887543
No 457
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=23.82 E-value=1.6e+02 Score=28.29 Aligned_cols=53 Identities=9% Similarity=0.134 Sum_probs=34.8
Q ss_pred HHHHHHHHHh-CCCCCceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCcccCc
Q 013235 144 ADFAEALASK-MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (447)
Q Consensus 144 ~elae~L~~~-~~~~~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG~~ 198 (447)
.++.+.+.+. ++.+...|++|++|..|-.++..+. .-|-+++..++|++..+.
T Consensus 217 ~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~--~~G~~~v~~y~Gs~~eW~ 270 (281)
T PRK11493 217 DELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALA--TLDVPNVKLYDGAWSEWG 270 (281)
T ss_pred HHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHH--HcCCCCceeeCCCHHHHc
Confidence 3455555432 2333457788999998877766553 336677888999987665
No 458
>PF02570 CbiC: Precorrin-8X methylmutase; InterPro: IPR003722 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CbiC and CobH precorrin-8X methylmutase (also known as precorrin isomerase, 5.4.1.2 from EC), both as stand-alone enzymes and when CobJ forms part of a bifunctional enzyme. CobH and CbiC from the aerobic and anaerobic pathways, respectively, catalyse a methyl rearrangement in precorrin-8 that moves the methyl group from C-11 to C-12 to produce hydrogenobyrinic acid []. Hydrogenobyrinic acid now contains all the major framework alterations associated with corrin synthesis []. CobH and CbiC can sometimes be fused to other enzymes in the cobalamin pathway to make bifunctional enzymes: e.g., with CobJ/CibH (precorrin-3B C17-methylase/precorrin isomerase, IPR014422 from INTERPRO) and with CbiX (precorrin isomerase, IPR012067 from INTERPRO).; GO: 0016993 precorrin-8X methylmutase activity, 0009236 cobalamin biosynthetic process; PDB: 1V9C_B 1I1H_A 1F2V_A 1OU0_B 2AFV_A 2AFR_A 3E7D_D.
Probab=23.72 E-value=91 Score=28.57 Aligned_cols=48 Identities=38% Similarity=0.583 Sum_probs=24.1
Q ss_pred CCCCCEEEeeccccCCccccccccCHHHHHhhcC--Ccc---cccCCCChHHHHHHHHHHH
Q 013235 314 GVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR--RNY---FNTFGGNPVCTAAGHAVLK 369 (447)
Q Consensus 314 gv~pDivt~sK~lg~G~pigav~~~~~i~~~l~~--~~~---~~T~~~np~a~aaala~L~ 369 (447)
++.|++|+ |+|+|+|-..+. .+.|.+ ..+ -++.||+|++.++-.+.|+
T Consensus 143 ~~~PalVI-------g~PVGFV~A~ES-Ke~L~~~~vP~I~~~G~kGGS~vAaAivNALl~ 195 (198)
T PF02570_consen 143 GVRPALVI-------GVPVGFVGAAES-KEALMQSGVPYITVRGRKGGSPVAAAIVNALLY 195 (198)
T ss_dssp T-TTSEEE-------E---SSSSHHHH-HHHHHHSTS-EEEESSS---HHHHHHHHHHHHH
T ss_pred CCCCcEEE-------ECCCcccCcHHH-HHHHHhCCCCEEEEecCCCCHHHHHHHHHHHHH
Confidence 46777775 789998855322 122221 122 3788999999888777665
No 459
>PF12310 Elf-1_N: Transcription factor protein N terminal; InterPro: IPR022084 This domain family is found in eukaryotes, and is approximately 110 amino acids in length. The family is found in association with PF00178 from PFAM. There is a conserved PAVIVE sequence motif. Elf-1 is an immune cell specific transcription factor. It is found in T cells, B cells, megakaryocytes,and mast cells and is involved in the control of transcription for various immune proteins. These include IL-2, GM-CSF, IL-5, IL-2 receptor alpha chain, and CD4 in T cells, IgH, blk, and lyn in B cells, TdT in T and B cells, IL-3 in megakaryocytes, and SCL and Fc-epsilon-RI alpha chain in mast cells.
Probab=23.56 E-value=69 Score=26.19 Aligned_cols=35 Identities=9% Similarity=0.178 Sum_probs=23.0
Q ss_pred CCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccc
Q 013235 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR 302 (447)
Q Consensus 252 ~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr 302 (447)
+...-|||+||+++.. |-.-|-. |..||+.+++-.
T Consensus 28 ps~~PAVIVE~VP~a~---------------l~~~Ysg-Lv~dde~t~~m~ 62 (108)
T PF12310_consen 28 PSVFPAVIVEQVPSAD---------------LLQGYSG-LVYDDEPTYMMQ 62 (108)
T ss_pred CCCCCeEEEeecCchH---------------Hhccccc-eEEeecccceEE
Confidence 4456799999987632 2334544 777888777643
No 460
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=23.46 E-value=1.8e+02 Score=26.97 Aligned_cols=54 Identities=11% Similarity=0.096 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 236 GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 236 ~~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
.+...+++++.+.. ..+.+|-+.|..+ +....++.+.+.+.++|.++|+++++-
T Consensus 83 ~~~~~~~l~~~~~~---~g~~Gv~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~pv~~H 136 (273)
T PF04909_consen 83 PEDAVEELERALQE---LGFRGVKLHPDLG--GFDPDDPRLDDPIFEAAEELGLPVLIH 136 (273)
T ss_dssp HHHHHHHHHHHHHT---TTESEEEEESSET--TCCTTSGHCHHHHHHHHHHHT-EEEEE
T ss_pred chhHHHHHHHhccc---cceeeeEecCCCC--ccccccHHHHHHHHHHHHhhccceeee
Confidence 34446777777753 2567787777332 223334444459999999999998865
No 461
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=23.19 E-value=2.3e+02 Score=23.24 Aligned_cols=45 Identities=9% Similarity=-0.030 Sum_probs=30.5
Q ss_pred HHHHHHHccCCCCeEEEEEcccc-CCCceeeCCCChHHHHHHHHHHhCCEEEE
Q 013235 242 DVQDLIDFGTSGHVAGFLSESIQ-GVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 242 ~le~~i~~~~~~~~aavi~Epi~-~~gG~~~~~~~~l~~l~~l~~~~g~llI~ 293 (447)
++.+++. .+++..||.-|-+ +..+. ..--..||+.|.+++++++-
T Consensus 61 ~i~~~i~---~g~i~~VInt~~~~~~~~~----~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 61 QIGALIA---EGEIDAVIFFRDPLTAQPH----EPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred HHHHHHH---cCceeEEEEcCCCCCCCcc----cccHHHHHHHHHHcCCCEEE
Confidence 3555555 3588899888765 44321 22255899999999999873
No 462
>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily. They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).
Probab=22.97 E-value=2.5e+02 Score=23.06 Aligned_cols=41 Identities=17% Similarity=0.231 Sum_probs=27.1
Q ss_pred CCceEEEcC-CHHHHHHHHHHHHHh----------hcCCCeEEEEcCCcccC
Q 013235 157 NLKVVFFTN-SGTEANELAIMMARL----------YTGCNDIISLRNAYHGN 197 (447)
Q Consensus 157 ~~~~v~~~~-sGseA~e~Aik~ar~----------~t~~~~ii~~~~~yHG~ 197 (447)
+...|++|. ||.-+..+|..+.+. ..|-.+|.+++|+|+..
T Consensus 68 ~~~vv~yC~~sg~rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f 119 (121)
T cd01530 68 RRVLIFHCEFSSKRGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNF 119 (121)
T ss_pred CCEEEEECCCccccHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhh
Confidence 344666775 887777777766543 01446788999988643
No 463
>COG3598 RepA RecA-family ATPase [DNA replication, recombination, and repair]
Probab=22.93 E-value=1.5e+02 Score=29.46 Aligned_cols=53 Identities=6% Similarity=-0.017 Sum_probs=36.3
Q ss_pred HHHHHHHHHHccCCCCeEEEEEccccCCC-ceeeC---CCChHHHHHHHHHHhCCEEEEe
Q 013235 239 YAKDVQDLIDFGTSGHVAGFLSESIQGVG-GIIEL---APGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 239 ~~~~le~~i~~~~~~~~aavi~Epi~~~g-G~~~~---~~~~l~~l~~l~~~~g~llI~D 294 (447)
+....+..+.+. ++-+||+||+.... |.-.. -..|.+..+++|+.+++-+|.=
T Consensus 182 l~rRfek~~~Q~---rp~~vViDp~v~f~~G~s~s~vqv~~fi~~~rkla~~l~caIiy~ 238 (402)
T COG3598 182 LYRRFEKILEQK---RPDFVVIDPFVAFYEGKSISDVQVKEFIKKTRKLARNLECAIIYI 238 (402)
T ss_pred HHHHHHHHHHHh---CCCeEEEcchhhhcCCccchhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 455566666543 56799999976553 32221 2369999999999999987753
No 464
>PHA03297 envelope glycoprotein L; Provisional
Probab=22.84 E-value=1.8e+02 Score=25.24 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=38.6
Q ss_pred ccCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH----hcCCeeeEeecceeEEEEEeeCC
Q 013235 352 NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD----KYGIIGDVRGRGFLLGVEFVTDR 419 (447)
Q Consensus 352 ~T~~~np~a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i~~vrg~Gl~~giel~~~~ 419 (447)
-+|..||.+..-+++- .+..++.-.+.+ ..|.+.|..... .-+.+.+.+-.|.++|--|.+.+
T Consensus 94 ~aYWvNPyvviqGLAe--dV~~~~~p~D~k---~~LldaLd~al~~~q~spD~st~pP~lGCv~Gpffls~p 160 (185)
T PHA03297 94 KPVWVNPFAVIQGLAE--DVTNGNMPQDFK---EKLLFALDDSLSQSQSSPDEILGPPPLGCFTGPFFLSPP 160 (185)
T ss_pred ceEEecHHHHHHHHHH--HHhccccchHHH---HHHHHHHHHHHhhcccCCccccCCCCCCceecceecCCc
Confidence 5688899998888762 233333333322 334445544333 33567778888999997776553
No 465
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=22.66 E-value=1.3e+02 Score=29.61 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=51.1
Q ss_pred CeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEEEEeccccCccccCCCcccccccCCCCCEEEeeccccCCcccc
Q 013235 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLG 333 (447)
Q Consensus 254 ~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~llI~DEv~tGfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig 333 (447)
++.+|++- ++++||.+.....-.++|+++.++.-+.++++.+-+ .| ..|- -.-.|-+...+.---| +||
T Consensus 97 ~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA----SG-GY~I----A~aAd~I~a~p~si~G-SIG 165 (317)
T COG0616 97 SVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA----SG-GYYI----ALAADKIVADPSSITG-SIG 165 (317)
T ss_pred CCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec----ch-hhhh----hccCCEEEecCCceee-ece
Confidence 55666554 678899998888888888888887757777776543 34 2221 1233555555433223 566
Q ss_pred ccccCHHHHHhhcC
Q 013235 334 AVVTTPEIAEVLTR 347 (447)
Q Consensus 334 av~~~~~i~~~l~~ 347 (447)
.+...+.+-+.+.+
T Consensus 166 Vi~~~~~~~~l~~k 179 (317)
T COG0616 166 VISGAPNFEELLEK 179 (317)
T ss_pred eEEecCCHHHHHHh
Confidence 66666666555543
No 466
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=22.22 E-value=1.1e+02 Score=24.12 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=26.4
Q ss_pred CceEEEcCCHHHHHHHHHHHHHhhcCCCeEEEEcCCccc
Q 013235 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHG 196 (447)
Q Consensus 158 ~~~v~~~~sGseA~e~Aik~ar~~t~~~~ii~~~~~yHG 196 (447)
...|++|.+|..+...|..+.+. |-++|..++|++.+
T Consensus 66 ~~vv~~c~~g~~s~~~a~~L~~~--G~~~v~~l~GG~~a 102 (105)
T cd01525 66 KIIVIVSHSHKHAALFAAFLVKC--GVPRVCILDGGINA 102 (105)
T ss_pred CeEEEEeCCCccHHHHHHHHHHc--CCCCEEEEeCcHHH
Confidence 45778888888777777665443 66678788888754
No 467
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=21.90 E-value=6.1e+02 Score=24.82 Aligned_cols=40 Identities=5% Similarity=-0.043 Sum_probs=24.2
Q ss_pred HHHHHHHHccCCCCeEEEEEccccCCCceeeCCCChHHHHHHHHHHhCCEE
Q 013235 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291 (447)
Q Consensus 241 ~~le~~i~~~~~~~~aavi~Epi~~~gG~~~~~~~~l~~l~~l~~~~g~ll 291 (447)
.++.++++.....++.+|++||.++. +.+..++++.|+-+
T Consensus 239 ~~l~~l~~~ik~~~v~~If~e~~~~~-----------~~~~~la~e~g~~v 278 (311)
T PRK09545 239 QRLHEIRTQLVEQKATCVFAEPQFRP-----------AVIESVAKGTSVRM 278 (311)
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCh-----------HHHHHHHHhcCCeE
Confidence 44444444333457889999986542 34566677777654
No 468
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=21.18 E-value=86 Score=20.97 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=16.4
Q ss_pred CCChHHHHHHHHHHhCCEEEE
Q 013235 273 APGYLPAVYKSIKKAGGLCIA 293 (447)
Q Consensus 273 ~~~~l~~l~~l~~~~g~llI~ 293 (447)
+-.|++.+++.++++|+.-|+
T Consensus 15 p~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 15 PLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HHHHHHHHHHHHhhCCEEEEE
Confidence 446788888889999987664
No 469
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=20.81 E-value=77 Score=24.59 Aligned_cols=23 Identities=17% Similarity=0.072 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHhCCEEEEecccc
Q 013235 276 YLPAVYKSIKKAGGLCIADEVQA 298 (447)
Q Consensus 276 ~l~~l~~l~~~~g~llI~DEv~t 298 (447)
.-++|+++++++|++++-|....
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 36789999999999999998643
No 470
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=20.71 E-value=1.3e+02 Score=25.98 Aligned_cols=55 Identities=5% Similarity=-0.071 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHcc---CCCCeEEEEEccccCC-Cce--eeCCCChHHHHHHHHHHhCCEEE
Q 013235 237 EMYAKDVQDLIDFG---TSGHVAGFLSESIQGV-GGI--IELAPGYLPAVYKSIKKAGGLCI 292 (447)
Q Consensus 237 ~~~~~~le~~i~~~---~~~~~aavi~Epi~~~-gG~--~~~~~~~l~~l~~l~~~~g~llI 292 (447)
+.+.+.++++++.. .+ ..-.+++.|.+.. .+. ...-.++-+.++++|+++|+.+|
T Consensus 68 ~~~~~~l~~li~~~~~~~~-~~~vi~~~~~p~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 128 (169)
T cd01828 68 EDIVANYRTILEKLRKHFP-NIKIVVQSILPVGELKSIPNEQIEELNRQLAQLAQQEGVTFL 128 (169)
T ss_pred HHHHHHHHHHHHHHHHHCC-CCeEEEEecCCcCccCcCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 44455555555432 23 3345555553332 111 11113466778999999998777
No 471
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=20.25 E-value=6.5e+02 Score=24.91 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHccCCCCeEEEEEccccCCCc---------eee--CC----CChHHHHHHHHHHhCCEEE-Eecccc
Q 013235 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGG---------IIE--LA----PGYLPAVYKSIKKAGGLCI-ADEVQA 298 (447)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~aavi~Epi~~~gG---------~~~--~~----~~~l~~l~~l~~~~g~llI-~DEv~t 298 (447)
++.++.++.++. .+.+..||+|++.+--- ... .. ..+|..|..+++++|+.+| .-+++.
T Consensus 119 eq~l~~~~~li~---~~~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQvr~ 193 (321)
T TIGR02012 119 EQALEIAETLVR---SGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIFINQIRE 193 (321)
T ss_pred HHHHHHHHHHhh---ccCCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence 333445555554 24678999999765321 000 00 1367888899999999766 455555
No 472
>PRK13938 phosphoheptose isomerase; Provisional
Probab=20.14 E-value=6.6e+02 Score=22.79 Aligned_cols=16 Identities=13% Similarity=0.179 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhCCEEE
Q 013235 277 LPAVYKSIKKAGGLCI 292 (447)
Q Consensus 277 l~~l~~l~~~~g~llI 292 (447)
+-++.+.++++|+.+|
T Consensus 129 vi~a~~~Ak~~G~~vI 144 (196)
T PRK13938 129 VLRAAKTARELGVTVV 144 (196)
T ss_pred HHHHHHHHHHCCCEEE
Confidence 7788899999999888
No 473
>COG4422 Bacteriophage protein gp37 [Function unknown]
Probab=20.02 E-value=1e+02 Score=27.69 Aligned_cols=25 Identities=12% Similarity=0.243 Sum_probs=21.0
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEe
Q 013235 270 IELAPGYLPAVYKSIKKAGGLCIAD 294 (447)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~g~llI~D 294 (447)
.+.++.|..+|++.|+.+|..+.+-
T Consensus 198 R~idp~WvdeI~~~C~~~~~aFFFK 222 (250)
T COG4422 198 RPIDPQWVDEIEDMCRDAGTAFFFK 222 (250)
T ss_pred CCCCHHHHHHHHHHHHhcCccchhH
Confidence 3557789999999999999887765
Done!