Query 013238
Match_columns 447
No_of_seqs 344 out of 3745
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 01:49:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013238.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013238hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.8E-56 4E-61 430.0 27.8 290 108-402 61-353 (361)
2 KOG0192 Tyrosine kinase specif 100.0 3.8E-50 8.3E-55 383.5 20.4 256 123-401 42-303 (362)
3 KOG0581 Mitogen-activated prot 100.0 6.2E-50 1.3E-54 364.6 19.6 251 123-396 80-334 (364)
4 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-50 3E-55 385.3 13.0 259 119-402 203-462 (468)
5 PLN00113 leucine-rich repeat r 100.0 1.1E-46 2.5E-51 412.5 35.2 374 1-403 573-953 (968)
6 KOG0595 Serine/threonine-prote 100.0 7.4E-48 1.6E-52 353.9 20.9 199 122-329 10-216 (429)
7 KOG0615 Serine/threonine prote 100.0 8.4E-49 1.8E-53 359.7 13.6 255 120-399 170-439 (475)
8 KOG0575 Polo-like serine/threo 100.0 6.8E-48 1.5E-52 370.7 19.3 248 122-396 18-268 (592)
9 KOG1026 Nerve growth factor re 100.0 4E-48 8.6E-53 386.0 15.4 264 117-401 481-762 (774)
10 KOG0591 NIMA (never in mitosis 100.0 7.9E-49 1.7E-53 343.2 8.4 259 123-399 20-283 (375)
11 KOG0598 Ribosomal protein S6 k 100.0 1.4E-46 3E-51 342.6 18.3 245 120-390 23-270 (357)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 5.8E-46 1.3E-50 364.0 11.3 256 122-401 629-891 (996)
13 KOG0582 Ste20-like serine/thre 100.0 2.8E-44 6E-49 333.1 21.7 263 120-396 24-292 (516)
14 KOG0198 MEKK and related serin 100.0 3.6E-45 7.9E-50 339.0 15.8 256 122-400 17-279 (313)
15 cd05102 PTKc_VEGFR3 Catalytic 100.0 1E-44 2.3E-49 351.2 18.5 264 118-401 3-334 (338)
16 KOG4721 Serine/threonine prote 100.0 1.5E-45 3.2E-50 349.5 11.3 242 125-401 127-368 (904)
17 KOG0593 Predicted protein kina 100.0 6.9E-45 1.5E-49 321.5 14.2 262 122-396 2-283 (396)
18 KOG0193 Serine/threonine prote 100.0 6.9E-45 1.5E-49 348.5 15.3 265 111-401 381-653 (678)
19 KOG0592 3-phosphoinositide-dep 100.0 1.5E-44 3.3E-49 342.3 17.3 289 121-444 72-380 (604)
20 KOG0600 Cdc2-related protein k 100.0 2.3E-44 4.9E-49 338.4 17.5 264 121-396 116-399 (560)
21 KOG1095 Protein tyrosine kinas 100.0 8.4E-45 1.8E-49 374.7 15.1 261 120-401 690-961 (1025)
22 KOG0659 Cdk activating kinase 100.0 1.3E-43 2.8E-48 308.3 18.2 263 122-397 2-281 (318)
23 KOG0661 MAPK related serine/th 100.0 1.1E-44 2.4E-49 338.2 12.2 264 120-397 8-291 (538)
24 KOG0616 cAMP-dependent protein 100.0 7.5E-44 1.6E-48 314.3 16.5 238 121-388 43-283 (355)
25 KOG1094 Discoidin domain recep 100.0 1.4E-43 3.1E-48 337.1 19.5 269 118-402 534-805 (807)
26 KOG0578 p21-activated serine/t 100.0 3.4E-44 7.3E-49 342.6 15.0 259 122-407 273-535 (550)
27 KOG0597 Serine-threonine prote 100.0 1.5E-43 3.2E-48 336.1 15.5 247 122-396 2-250 (808)
28 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.8E-43 1.5E-47 326.9 19.6 256 121-400 4-264 (266)
29 KOG0201 Serine/threonine prote 100.0 3.7E-44 8E-49 332.0 10.4 253 122-400 13-268 (467)
30 KOG0583 Serine/threonine prote 100.0 1.8E-42 3.8E-47 333.9 22.5 251 119-396 14-274 (370)
31 cd05104 PTKc_Kit Catalytic dom 100.0 5E-43 1.1E-47 343.5 19.0 263 118-400 31-373 (375)
32 cd05096 PTKc_DDR1 Catalytic do 100.0 3.1E-42 6.7E-47 328.9 23.8 266 121-400 4-304 (304)
33 KOG0194 Protein tyrosine kinas 100.0 9.6E-44 2.1E-48 343.9 12.7 265 114-403 149-422 (474)
34 KOG3653 Transforming growth fa 100.0 4.7E-42 1E-46 320.3 23.2 264 123-400 211-502 (534)
35 PHA02988 hypothetical protein; 100.0 3.3E-42 7.1E-47 325.1 22.1 262 107-401 10-279 (283)
36 cd05106 PTKc_CSF-1R Catalytic 100.0 1.2E-42 2.7E-47 340.4 18.9 264 118-401 34-372 (374)
37 cd05612 STKc_PRKX_like Catalyt 100.0 4.6E-42 1E-46 325.5 20.4 281 122-434 1-289 (291)
38 KOG4278 Protein tyrosine kinas 100.0 5.2E-43 1.1E-47 335.1 12.0 279 114-417 259-539 (1157)
39 cd05048 PTKc_Ror Catalytic Dom 100.0 1E-41 2.2E-46 321.8 20.8 258 122-400 5-282 (283)
40 PF07714 Pkinase_Tyr: Protein 100.0 1.8E-42 3.9E-47 322.7 15.4 249 127-398 4-259 (259)
41 KOG0694 Serine/threonine prote 100.0 4.8E-42 1E-46 334.1 18.8 243 119-391 365-613 (694)
42 cd05072 PTKc_Lyn Catalytic dom 100.0 6E-42 1.3E-46 319.5 18.8 256 120-400 4-260 (261)
43 KOG4257 Focal adhesion tyrosin 100.0 2.4E-42 5.2E-47 330.8 16.2 270 113-407 380-655 (974)
44 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1E-41 2.3E-46 317.0 19.8 252 122-399 4-256 (256)
45 KOG0663 Protein kinase PITSLRE 100.0 4.2E-42 9.2E-47 307.7 15.9 262 122-396 76-360 (419)
46 KOG0605 NDR and related serine 100.0 2.5E-41 5.3E-46 320.6 21.9 249 119-390 138-435 (550)
47 cd06649 PKc_MEK2 Catalytic dom 100.0 3.9E-41 8.4E-46 325.1 23.7 200 121-329 4-204 (331)
48 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-41 2.5E-46 335.2 20.0 263 118-400 33-396 (400)
49 cd05068 PTKc_Frk_like Catalyti 100.0 1.8E-41 3.8E-46 316.4 19.8 257 119-400 3-260 (261)
50 KOG0588 Serine/threonine prote 100.0 3.6E-42 7.7E-47 332.7 14.7 247 123-397 13-263 (786)
51 cd05033 PTKc_EphR Catalytic do 100.0 3.7E-41 8E-46 315.1 21.3 257 121-401 3-265 (266)
52 cd05631 STKc_GRK4 Catalytic do 100.0 5.3E-41 1.1E-45 317.4 22.2 251 124-396 2-260 (285)
53 cd05062 PTKc_IGF-1R Catalytic 100.0 2.1E-41 4.6E-46 318.7 19.2 261 119-400 3-277 (277)
54 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.1E-41 1.5E-45 317.0 22.8 262 122-396 5-284 (288)
55 cd05049 PTKc_Trk Catalytic dom 100.0 2.5E-41 5.4E-46 318.6 19.6 259 121-400 4-280 (280)
56 KOG2345 Serine/threonine prote 100.0 3.4E-42 7.5E-47 296.6 12.3 265 119-400 18-299 (302)
57 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.2E-41 1.8E-45 318.9 23.2 264 121-396 4-287 (303)
58 cd05108 PTKc_EGFR Catalytic do 100.0 2.5E-41 5.4E-46 324.4 19.5 257 121-402 6-269 (316)
59 cd05054 PTKc_VEGFR Catalytic d 100.0 1.6E-41 3.4E-46 328.2 18.2 263 118-400 3-332 (337)
60 cd07848 STKc_CDKL5 Catalytic d 100.0 5.6E-41 1.2E-45 317.5 21.4 268 122-396 1-283 (287)
61 cd05052 PTKc_Abl Catalytic dom 100.0 2.5E-41 5.5E-46 315.7 18.8 255 121-400 5-261 (263)
62 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-41 3.1E-46 317.0 16.7 258 119-400 94-375 (576)
63 KOG0589 Serine/threonine prote 100.0 4E-42 8.7E-47 326.5 13.2 252 122-397 4-258 (426)
64 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.5E-41 9.8E-46 312.8 20.0 252 122-399 4-256 (256)
65 cd08228 STKc_Nek6 Catalytic do 100.0 8.8E-41 1.9E-45 312.6 22.0 262 122-402 2-266 (267)
66 PLN00034 mitogen-activated pro 100.0 3.6E-41 7.8E-46 328.2 19.6 249 122-397 74-328 (353)
67 cd05571 STKc_PKB Catalytic dom 100.0 5.7E-41 1.2E-45 322.8 20.6 242 128-396 1-250 (323)
68 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-40 2.9E-45 321.4 23.2 201 120-329 3-204 (333)
69 cd05084 PTKc_Fes Catalytic dom 100.0 9.5E-41 2.1E-45 309.7 21.3 248 128-399 1-251 (252)
70 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.8E-41 1.7E-45 315.9 20.7 266 125-401 7-281 (283)
71 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.5E-41 5.4E-46 315.3 17.0 256 120-400 4-260 (261)
72 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.8E-41 1.5E-45 323.8 20.6 254 122-397 1-257 (333)
73 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.2E-41 1.8E-45 311.7 20.2 255 120-400 4-259 (260)
74 PTZ00263 protein kinase A cata 100.0 2.7E-41 5.9E-46 325.8 17.5 245 122-396 18-270 (329)
75 cd05059 PTKc_Tec_like Catalyti 100.0 8E-41 1.7E-45 311.1 20.0 251 122-398 4-255 (256)
76 cd05053 PTKc_FGFR Catalytic do 100.0 3.6E-41 7.8E-46 319.8 18.0 264 117-401 7-291 (293)
77 cd05085 PTKc_Fer Catalytic dom 100.0 1.4E-40 3.1E-45 308.1 21.2 248 128-399 1-249 (250)
78 KOG0580 Serine/threonine prote 100.0 6.7E-42 1.4E-46 293.5 10.9 251 120-397 20-273 (281)
79 cd05585 STKc_YPK1_like Catalyt 100.0 2E-40 4.3E-45 317.5 22.3 247 130-403 1-250 (312)
80 cd05043 PTK_Ryk Pseudokinase d 100.0 7.6E-41 1.6E-45 315.4 19.2 262 119-401 3-276 (280)
81 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-40 2.5E-45 311.2 19.9 255 120-400 4-259 (262)
82 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-40 2.5E-45 310.7 19.9 256 119-400 3-259 (260)
83 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.2E-40 6.9E-45 308.7 22.9 261 122-401 2-265 (267)
84 KOG1989 ARK protein kinase fam 100.0 4.2E-41 9.2E-46 337.2 17.1 266 119-409 34-319 (738)
85 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-40 2.4E-45 328.0 19.8 265 117-401 32-399 (401)
86 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-40 3.4E-45 313.8 20.1 258 122-400 5-282 (283)
87 cd05032 PTKc_InsR_like Catalyt 100.0 9.1E-41 2E-45 314.3 18.3 261 119-400 3-277 (277)
88 cd05045 PTKc_RET Catalytic dom 100.0 1.8E-40 3.9E-45 314.5 20.4 258 123-401 1-286 (290)
89 cd05089 PTKc_Tie1 Catalytic do 100.0 1.4E-40 3E-45 316.4 19.6 258 122-402 2-276 (297)
90 PHA03212 serine/threonine kina 100.0 3.6E-40 7.8E-45 324.2 23.1 261 121-396 91-375 (391)
91 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-40 3.8E-45 312.5 19.5 259 120-399 4-276 (277)
92 cd05111 PTK_HER3 Pseudokinase 100.0 2.5E-40 5.4E-45 311.8 20.4 255 122-401 7-268 (279)
93 KOG0658 Glycogen synthase kina 100.0 2.4E-41 5.2E-46 307.7 12.8 258 123-396 25-305 (364)
94 cd05595 STKc_PKB_beta Catalyti 100.0 2.8E-40 6E-45 318.0 21.0 242 128-396 1-250 (323)
95 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.8E-41 1.2E-45 326.6 16.4 253 122-397 1-285 (350)
96 cd05061 PTKc_InsR Catalytic do 100.0 2.3E-40 5E-45 313.5 19.8 263 118-401 2-278 (288)
97 cd05055 PTKc_PDGFR Catalytic d 100.0 2.4E-40 5.2E-45 315.5 20.0 261 118-400 31-300 (302)
98 cd05069 PTKc_Yes Catalytic dom 100.0 4E-40 8.7E-45 307.1 21.1 254 121-400 5-259 (260)
99 cd05614 STKc_MSK2_N N-terminal 100.0 3E-40 6.5E-45 319.2 20.7 252 123-396 1-266 (332)
100 cd05091 PTKc_Ror2 Catalytic do 100.0 1.3E-40 2.8E-45 314.4 17.7 257 123-400 6-282 (283)
101 cd05093 PTKc_TrkB Catalytic do 100.0 2.7E-40 5.8E-45 313.1 19.9 260 121-402 4-280 (288)
102 cd05063 PTKc_EphR_A2 Catalytic 100.0 3E-40 6.5E-45 309.3 20.1 257 121-401 4-267 (268)
103 cd05034 PTKc_Src_like Catalyti 100.0 2.8E-40 6.1E-45 308.1 19.7 257 119-400 3-260 (261)
104 KOG0611 Predicted serine/threo 100.0 5.9E-41 1.3E-45 306.9 14.6 250 121-399 52-305 (668)
105 cd05596 STKc_ROCK Catalytic do 100.0 7.1E-41 1.5E-45 327.7 16.3 255 120-397 41-304 (370)
106 cd05115 PTKc_Zap-70 Catalytic 100.0 4.7E-40 1E-44 306.1 21.1 248 129-401 2-255 (257)
107 PTZ00283 serine/threonine prot 100.0 1.8E-40 3.8E-45 335.4 19.6 257 120-397 30-297 (496)
108 cd07862 STKc_CDK6 Catalytic do 100.0 6.5E-40 1.4E-44 310.7 22.3 262 122-396 1-286 (290)
109 cd05608 STKc_GRK1 Catalytic do 100.0 6.3E-40 1.4E-44 309.2 22.0 248 130-396 1-256 (280)
110 cd05588 STKc_aPKC Catalytic do 100.0 4E-40 8.7E-45 317.6 21.1 246 128-391 1-250 (329)
111 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.2E-40 7E-45 319.7 20.6 262 123-397 1-290 (338)
112 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.9E-40 4E-45 317.1 18.6 262 119-401 15-299 (307)
113 cd05618 STKc_aPKC_iota Catalyt 100.0 4E-40 8.8E-45 317.5 21.0 246 128-391 1-250 (329)
114 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.4E-40 5.1E-45 315.9 19.0 262 119-401 12-296 (304)
115 cd05593 STKc_PKB_gamma Catalyt 100.0 4.5E-40 9.8E-45 317.1 21.1 243 128-397 1-251 (328)
116 PTZ00267 NIMA-related protein 100.0 2.7E-40 5.9E-45 333.8 20.2 252 123-396 68-322 (478)
117 cd05109 PTKc_HER2 Catalytic do 100.0 4.6E-40 9.9E-45 310.0 20.4 258 121-403 6-270 (279)
118 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-40 3E-45 325.3 17.5 258 117-397 38-304 (370)
119 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-40 3.2E-45 321.0 17.5 253 122-396 1-262 (330)
120 cd05066 PTKc_EphR_A Catalytic 100.0 5.8E-40 1.3E-44 307.2 20.8 257 121-401 3-266 (267)
121 cd08229 STKc_Nek7 Catalytic do 100.0 7.4E-40 1.6E-44 306.4 20.9 260 122-400 2-264 (267)
122 cd05039 PTKc_Csk_like Catalyti 100.0 8.9E-40 1.9E-44 304.0 21.3 250 121-400 5-255 (256)
123 PTZ00426 cAMP-dependent protei 100.0 3.7E-40 7.9E-45 318.8 19.3 247 121-397 29-284 (340)
124 cd05097 PTKc_DDR_like Catalyti 100.0 5.6E-40 1.2E-44 312.0 20.3 266 121-400 4-295 (295)
125 cd05116 PTKc_Syk Catalytic dom 100.0 8.1E-40 1.8E-44 304.5 20.9 246 129-400 2-254 (257)
126 cd05050 PTKc_Musk Catalytic do 100.0 4.1E-40 8.8E-45 311.8 19.1 260 120-400 3-288 (288)
127 cd05626 STKc_LATS2 Catalytic d 100.0 3.3E-40 7.1E-45 324.7 19.2 253 123-397 2-305 (381)
128 cd05584 STKc_p70S6K Catalytic 100.0 3E-40 6.6E-45 317.7 18.5 242 128-396 2-255 (323)
129 cd05088 PTKc_Tie2 Catalytic do 100.0 3.4E-40 7.3E-45 314.6 18.6 257 122-401 7-280 (303)
130 cd05094 PTKc_TrkC Catalytic do 100.0 5.5E-40 1.2E-44 311.4 19.9 258 122-401 5-282 (291)
131 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-39 3.2E-44 309.1 22.9 266 121-400 4-296 (296)
132 cd05599 STKc_NDR_like Catalyti 100.0 4.5E-40 9.7E-45 322.0 19.9 253 122-397 1-296 (364)
133 cd05073 PTKc_Hck Catalytic dom 100.0 6.1E-40 1.3E-44 305.8 19.8 256 119-400 3-259 (260)
134 cd05592 STKc_nPKC_theta_delta 100.0 2.4E-39 5.2E-44 310.5 24.3 239 128-393 1-243 (316)
135 KOG0594 Protein kinase PCTAIRE 100.0 3.8E-40 8.3E-45 300.3 17.7 266 122-397 11-302 (323)
136 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-39 2.4E-44 306.0 21.4 255 125-400 2-270 (272)
137 cd05628 STKc_NDR1 Catalytic do 100.0 4.6E-40 9.9E-45 321.6 19.4 200 122-328 1-237 (363)
138 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.8E-40 1.3E-44 314.6 19.7 263 118-401 8-293 (314)
139 cd05589 STKc_PKN Catalytic dom 100.0 2E-39 4.3E-44 312.2 23.4 245 124-396 1-256 (324)
140 cd05060 PTKc_Syk_like Catalyti 100.0 1.1E-39 2.4E-44 303.6 20.9 248 128-401 1-255 (257)
141 cd05570 STKc_PKC Catalytic dom 100.0 2.4E-39 5.2E-44 310.8 23.7 242 128-396 1-251 (318)
142 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.9E-40 1.1E-44 318.9 18.9 263 119-401 4-339 (343)
143 cd06625 STKc_MEKK3_like Cataly 100.0 1.6E-39 3.5E-44 303.3 21.6 252 122-397 2-260 (263)
144 cd05095 PTKc_DDR2 Catalytic do 100.0 1.8E-39 3.8E-44 308.7 22.2 266 121-400 4-296 (296)
145 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-39 3.3E-44 304.9 21.3 251 128-401 1-268 (270)
146 cd05035 PTKc_Axl_like Catalyti 100.0 1.5E-39 3.3E-44 305.1 21.3 257 124-401 1-272 (273)
147 cd05605 STKc_GRK4_like Catalyt 100.0 2.1E-39 4.6E-44 306.4 22.2 253 123-397 1-261 (285)
148 KOG0610 Putative serine/threon 100.0 4.3E-40 9.3E-45 302.9 16.7 261 120-402 75-399 (459)
149 cd08529 STKc_FA2-like Catalyti 100.0 1.6E-39 3.4E-44 302.0 20.7 251 123-397 1-253 (256)
150 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.2E-39 6.9E-44 311.1 23.5 244 128-391 1-248 (327)
151 cd05590 STKc_nPKC_eta Catalyti 100.0 1.4E-39 3.1E-44 312.6 20.9 238 128-392 1-242 (320)
152 cd05065 PTKc_EphR_B Catalytic 100.0 9.2E-40 2E-44 306.2 19.1 255 123-401 5-268 (269)
153 cd05587 STKc_cPKC Catalytic do 100.0 3.8E-39 8.1E-44 310.3 23.9 242 123-391 1-246 (324)
154 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.5E-40 1.8E-44 316.2 19.4 267 118-405 8-297 (334)
155 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-39 5E-44 300.2 21.5 249 128-400 1-251 (251)
156 cd05622 STKc_ROCK1 Catalytic d 100.0 2.7E-39 5.9E-44 316.5 23.0 262 114-398 35-305 (371)
157 cd05056 PTKc_FAK Catalytic dom 100.0 9.3E-40 2E-44 306.3 18.6 260 120-404 4-268 (270)
158 cd07853 STKc_NLK Catalytic dom 100.0 1.5E-39 3.1E-44 319.2 20.7 262 123-397 1-288 (372)
159 cd05594 STKc_PKB_alpha Catalyt 100.0 7.7E-40 1.7E-44 315.3 18.3 243 128-397 1-252 (325)
160 KOG0660 Mitogen-activated prot 100.0 4.5E-40 9.7E-45 298.9 15.6 264 120-396 20-309 (359)
161 cd00192 PTKc Catalytic domain 100.0 2.3E-39 4.9E-44 301.6 20.8 251 128-399 1-262 (262)
162 PTZ00036 glycogen synthase kin 100.0 1E-39 2.3E-44 325.9 19.6 260 121-396 65-350 (440)
163 cd05602 STKc_SGK1 Catalytic do 100.0 2.8E-39 6.2E-44 311.3 21.9 248 128-402 1-252 (325)
164 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-39 2.5E-44 308.0 18.8 264 122-401 4-283 (284)
165 cd05607 STKc_GRK7 Catalytic do 100.0 1.6E-39 3.4E-44 306.0 19.7 250 130-400 1-253 (277)
166 cd05619 STKc_nPKC_theta Cataly 100.0 7.4E-39 1.6E-43 307.0 24.6 241 128-395 1-246 (316)
167 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-39 3E-44 302.5 19.1 251 123-397 1-252 (255)
168 cd06619 PKc_MKK5 Catalytic dom 100.0 3.7E-39 8.1E-44 303.8 22.1 253 123-399 2-255 (279)
169 cd05046 PTK_CCK4 Pseudokinase 100.0 2.3E-39 5E-44 304.4 20.7 259 122-400 5-275 (275)
170 cd05629 STKc_NDR_like_fungal C 100.0 5E-40 1.1E-44 323.0 16.7 253 122-397 1-305 (377)
171 KOG2052 Activin A type IB rece 100.0 6.4E-39 1.4E-43 297.3 22.8 265 121-402 210-504 (513)
172 cd05591 STKc_nPKC_epsilon Cata 100.0 2.6E-39 5.6E-44 311.1 21.1 243 128-397 1-254 (321)
173 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4E-39 8.7E-44 308.1 22.2 262 122-396 6-285 (309)
174 cd05582 STKc_RSK_N N-terminal 100.0 1.3E-39 2.7E-44 312.8 18.6 239 128-393 2-245 (318)
175 cd05092 PTKc_TrkA Catalytic do 100.0 2E-39 4.4E-44 305.8 19.6 257 122-400 5-280 (280)
176 cd05082 PTKc_Csk Catalytic dom 100.0 2.9E-39 6.2E-44 300.6 20.3 250 121-401 5-256 (256)
177 cd05112 PTKc_Itk Catalytic dom 100.0 2.8E-39 6E-44 300.6 20.1 252 122-399 4-256 (256)
178 cd05620 STKc_nPKC_delta Cataly 100.0 6.8E-39 1.5E-43 307.3 23.4 241 128-395 1-246 (316)
179 cd05575 STKc_SGK Catalytic dom 100.0 3.7E-39 7.9E-44 310.3 21.5 241 128-395 1-245 (323)
180 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.4E-39 1.4E-43 302.9 22.7 264 122-401 4-283 (284)
181 cd06646 STKc_MAP4K5 Catalytic 100.0 4.3E-39 9.3E-44 301.3 21.3 255 121-398 8-266 (267)
182 cd05625 STKc_LATS1 Catalytic d 100.0 1.8E-39 3.9E-44 319.6 19.7 200 123-329 2-250 (382)
183 cd05616 STKc_cPKC_beta Catalyt 100.0 1.3E-39 2.9E-44 313.3 18.1 242 123-391 1-246 (323)
184 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7E-39 1.5E-43 300.2 22.5 255 128-399 1-268 (269)
185 PRK13184 pknD serine/threonine 100.0 3E-39 6.6E-44 335.8 21.8 260 122-400 2-289 (932)
186 cd05040 PTKc_Ack_like Catalyti 100.0 3.5E-39 7.6E-44 300.1 20.0 249 128-399 1-256 (257)
187 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-39 5.4E-44 303.6 19.2 252 120-396 4-268 (272)
188 cd05598 STKc_LATS Catalytic do 100.0 1.4E-39 3.1E-44 319.8 18.2 252 123-397 2-301 (376)
189 KOG0199 ACK and related non-re 100.0 1.6E-40 3.6E-45 321.9 10.9 248 124-395 112-366 (1039)
190 cd05058 PTKc_Met_Ron Catalytic 100.0 4.9E-39 1.1E-43 300.0 20.4 250 128-401 1-259 (262)
191 cd06640 STKc_MST4 Catalytic do 100.0 1E-38 2.3E-43 300.4 22.5 249 122-397 4-253 (277)
192 cd05110 PTKc_HER4 Catalytic do 100.0 3.3E-39 7.2E-44 307.8 19.2 256 121-401 6-268 (303)
193 cd06609 STKc_MST3_like Catalyt 100.0 5E-39 1.1E-43 302.0 20.1 249 122-396 1-250 (274)
194 cd05597 STKc_DMPK_like Catalyt 100.0 9E-39 2E-43 308.5 22.4 256 122-397 1-266 (331)
195 cd05044 PTKc_c-ros Catalytic d 100.0 3.9E-39 8.4E-44 301.8 19.2 252 128-400 1-269 (269)
196 cd06654 STKc_PAK1 Catalytic do 100.0 6.6E-39 1.4E-43 304.7 21.1 249 122-396 20-269 (296)
197 cd06615 PKc_MEK Catalytic doma 100.0 9E-39 1.9E-43 305.5 22.0 263 122-398 1-288 (308)
198 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.5E-38 5.5E-43 299.4 24.9 279 122-413 1-284 (287)
199 cd05057 PTKc_EGFR_like Catalyt 100.0 4.9E-39 1.1E-43 302.9 19.9 256 121-401 6-268 (279)
200 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.4E-39 9.5E-44 306.7 19.6 273 122-407 6-296 (301)
201 KOG0032 Ca2+/calmodulin-depend 100.0 8.7E-39 1.9E-43 308.0 21.7 253 120-397 33-293 (382)
202 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.4E-39 5.3E-44 304.7 17.4 248 123-397 5-253 (277)
203 KOG0983 Mitogen-activated prot 100.0 3E-38 6.6E-43 275.7 22.7 268 127-417 97-372 (391)
204 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-38 2.5E-43 296.2 21.6 249 122-396 3-252 (256)
205 cd05603 STKc_SGK2 Catalytic do 100.0 1E-38 2.3E-43 306.9 21.6 246 128-400 1-251 (321)
206 PF00069 Pkinase: Protein kina 100.0 5.9E-39 1.3E-43 298.8 19.1 253 124-396 1-256 (260)
207 cd05604 STKc_SGK3 Catalytic do 100.0 7.9E-39 1.7E-43 308.2 20.3 247 128-401 1-251 (325)
208 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 6.8E-39 1.5E-43 302.5 19.4 264 122-401 4-283 (284)
209 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-38 3.2E-43 310.6 22.3 266 120-397 19-315 (359)
210 PHA03211 serine/threonine kina 100.0 2.2E-38 4.7E-43 315.6 23.4 263 121-397 168-455 (461)
211 cd08528 STKc_Nek10 Catalytic d 100.0 1.6E-38 3.4E-43 297.8 21.2 256 123-399 1-268 (269)
212 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.3E-38 1.1E-42 294.2 24.5 254 129-399 2-267 (268)
213 cd06638 STKc_myosinIIIA Cataly 100.0 7.5E-39 1.6E-43 302.7 18.9 264 113-398 9-284 (286)
214 cd05042 PTKc_Aatyk Catalytic d 100.0 2E-38 4.4E-43 297.1 21.5 254 129-399 2-268 (269)
215 smart00219 TyrKc Tyrosine kina 100.0 1.6E-38 3.4E-43 295.5 20.4 252 124-398 1-258 (258)
216 cd05624 STKc_MRCK_beta Catalyt 100.0 8.8E-39 1.9E-43 308.6 19.2 256 122-397 1-266 (331)
217 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.2E-38 2.6E-43 301.1 19.7 260 121-398 4-267 (284)
218 cd06631 STKc_YSK4 Catalytic do 100.0 1.8E-38 3.8E-43 296.8 20.6 251 123-396 1-261 (265)
219 cd05615 STKc_cPKC_alpha Cataly 100.0 6.9E-39 1.5E-43 308.2 18.2 243 123-392 1-247 (323)
220 cd05630 STKc_GRK6 Catalytic do 100.0 1.1E-38 2.4E-43 301.5 19.3 251 124-396 2-260 (285)
221 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-38 3.2E-43 300.2 20.1 254 122-396 1-260 (283)
222 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.6E-38 3.5E-43 299.9 20.2 260 112-396 6-278 (282)
223 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.1E-38 4.5E-43 295.9 20.6 240 128-399 1-262 (262)
224 KOG0599 Phosphorylase kinase g 100.0 2.1E-39 4.5E-44 282.8 12.8 251 122-396 17-282 (411)
225 KOG1025 Epidermal growth facto 100.0 6.2E-39 1.3E-43 315.9 17.7 251 125-400 699-956 (1177)
226 cd05623 STKc_MRCK_alpha Cataly 100.0 2.1E-38 4.6E-43 306.1 21.2 256 122-397 1-266 (332)
227 cd08221 STKc_Nek9 Catalytic do 100.0 2.4E-38 5.2E-43 294.2 20.7 252 123-398 1-254 (256)
228 cd06624 STKc_ASK Catalytic dom 100.0 2.5E-38 5.4E-43 296.3 20.9 258 117-396 3-264 (268)
229 cd05627 STKc_NDR2 Catalytic do 100.0 2.6E-39 5.5E-44 316.0 14.7 200 122-328 1-237 (360)
230 cd07863 STKc_CDK4 Catalytic do 100.0 3E-38 6.5E-43 298.9 21.6 261 123-396 1-284 (288)
231 cd07874 STKc_JNK3 Catalytic do 100.0 2.5E-38 5.5E-43 308.5 21.6 266 120-397 15-311 (355)
232 cd07861 STKc_CDK1_euk Catalyti 100.0 2.4E-38 5.3E-43 299.0 20.7 264 123-396 1-281 (285)
233 cd08227 PK_STRAD_alpha Pseudok 100.0 4.9E-38 1.1E-42 303.0 23.0 199 126-329 2-212 (327)
234 cd08217 STKc_Nek2 Catalytic do 100.0 2.8E-38 6E-43 294.9 20.6 253 123-397 1-262 (265)
235 cd06656 STKc_PAK3 Catalytic do 100.0 3.7E-38 8E-43 299.7 21.7 248 122-396 19-268 (297)
236 PHA03209 serine/threonine kina 100.0 6.7E-38 1.5E-42 305.4 23.7 193 119-327 63-256 (357)
237 KOG0033 Ca2+/calmodulin-depend 100.0 2E-40 4.3E-45 285.0 5.2 252 121-396 10-266 (355)
238 cd07875 STKc_JNK1 Catalytic do 100.0 4.3E-38 9.3E-43 307.9 22.4 198 120-329 22-227 (364)
239 cd05083 PTKc_Chk Catalytic dom 100.0 2E-38 4.4E-43 294.5 19.0 247 122-400 6-253 (254)
240 cd06613 STKc_MAP4K3_like Catal 100.0 6.6E-38 1.4E-42 292.2 22.5 254 121-396 2-259 (262)
241 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.4E-38 9.6E-43 294.4 21.3 249 123-396 1-263 (267)
242 cd05632 STKc_GRK5 Catalytic do 100.0 5.1E-38 1.1E-42 297.0 21.9 247 124-392 2-251 (285)
243 PTZ00266 NIMA-related protein 100.0 2E-38 4.3E-43 331.0 20.9 258 119-396 10-294 (1021)
244 cd06655 STKc_PAK2 Catalytic do 100.0 2.6E-38 5.6E-43 300.6 20.0 249 122-396 19-268 (296)
245 PHA03207 serine/threonine kina 100.0 3.5E-38 7.6E-43 311.2 21.6 262 120-397 90-375 (392)
246 cd08223 STKc_Nek4 Catalytic do 100.0 4E-38 8.7E-43 292.9 20.6 251 123-397 1-254 (257)
247 cd06651 STKc_MEKK3 Catalytic d 100.0 6.9E-38 1.5E-42 293.0 22.3 250 122-396 2-260 (266)
248 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.8E-38 6.1E-43 298.8 19.8 255 122-397 1-262 (286)
249 cd07868 STKc_CDK8 Catalytic do 100.0 1E-37 2.2E-42 299.5 23.8 196 127-329 6-218 (317)
250 cd06605 PKc_MAPKK Catalytic do 100.0 3.6E-38 7.8E-43 294.6 19.8 254 123-397 2-257 (265)
251 cd06644 STKc_STK10_LOK Catalyt 100.0 7.9E-38 1.7E-42 296.7 22.4 252 121-396 11-268 (292)
252 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.9E-38 1.1E-42 292.5 20.5 238 128-399 1-259 (259)
253 cd08218 STKc_Nek1 Catalytic do 100.0 3.4E-38 7.3E-43 293.3 19.3 250 123-396 1-252 (256)
254 PTZ00284 protein kinase; Provi 100.0 3.1E-38 6.7E-43 318.6 20.5 202 115-329 122-347 (467)
255 cd06639 STKc_myosinIIIB Cataly 100.0 3.5E-38 7.6E-43 299.0 19.5 263 113-397 13-287 (291)
256 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1E-37 2.2E-42 291.7 22.2 257 122-396 1-263 (267)
257 cd06641 STKc_MST3 Catalytic do 100.0 8.1E-38 1.8E-42 294.3 21.6 248 123-397 5-253 (277)
258 cd05574 STKc_phototropin_like 100.0 4.3E-38 9.4E-43 301.9 20.1 257 122-400 1-288 (316)
259 cd06608 STKc_myosinIII_like Ca 100.0 5.1E-38 1.1E-42 294.9 20.1 255 120-396 4-271 (275)
260 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.6E-38 1E-42 295.5 19.8 239 129-399 2-274 (274)
261 cd06645 STKc_MAP4K3 Catalytic 100.0 3.1E-38 6.8E-43 295.4 18.6 253 121-396 8-264 (267)
262 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7.6E-38 1.7E-42 303.7 21.5 260 119-396 12-297 (343)
263 cd06632 STKc_MEKK1_plant Catal 100.0 8.2E-38 1.8E-42 290.8 20.6 248 123-396 1-254 (258)
264 cd06643 STKc_SLK Catalytic dom 100.0 7.8E-38 1.7E-42 295.2 20.6 250 124-397 7-262 (282)
265 cd06611 STKc_SLK_like Catalyti 100.0 4.7E-38 1E-42 296.4 19.0 253 121-397 4-262 (280)
266 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-37 2.5E-42 294.5 21.4 263 122-396 1-282 (286)
267 cd07844 STKc_PCTAIRE_like Cata 100.0 1.5E-37 3.3E-42 294.6 22.1 263 122-396 5-287 (291)
268 cd06652 STKc_MEKK2 Catalytic d 100.0 1.4E-37 3.1E-42 290.7 21.5 251 122-397 2-261 (265)
269 cd07832 STKc_CCRK Catalytic do 100.0 1.7E-37 3.7E-42 293.3 22.3 263 123-397 1-282 (286)
270 KOG0577 Serine/threonine prote 100.0 3.1E-39 6.6E-44 307.9 10.2 245 123-396 27-277 (948)
271 cd07839 STKc_CDK5 Catalytic do 100.0 5.5E-38 1.2E-42 296.5 18.6 262 123-396 1-280 (284)
272 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-37 3E-42 292.7 21.0 248 123-396 2-254 (277)
273 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.8E-38 2.1E-42 293.0 19.9 257 124-401 1-272 (273)
274 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.4E-38 5.2E-43 294.8 15.3 240 128-399 1-258 (258)
275 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.2E-37 4.8E-42 290.5 22.0 255 123-397 2-269 (272)
276 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-38 2.6E-43 307.7 13.7 237 130-392 1-244 (330)
277 KOG4717 Serine/threonine prote 100.0 2.9E-38 6.2E-43 297.0 15.7 249 122-397 18-270 (864)
278 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.1E-38 1.5E-42 296.0 18.6 262 122-396 1-282 (286)
279 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.5E-37 7.5E-42 292.1 23.0 265 121-396 4-287 (291)
280 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-37 4.6E-42 289.0 21.2 252 123-397 2-256 (264)
281 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-37 3E-42 289.0 19.7 249 123-396 1-252 (256)
282 cd07867 STKc_CDC2L6 Catalytic 100.0 4.4E-37 9.5E-42 295.1 23.8 195 128-329 7-218 (317)
283 cd06626 STKc_MEKK4 Catalytic d 100.0 1.9E-37 4.1E-42 289.4 20.7 252 123-396 1-260 (264)
284 cd06616 PKc_MKK4 Catalytic dom 100.0 1.3E-37 2.9E-42 294.5 19.5 257 123-397 5-267 (288)
285 cd07833 STKc_CDKL Catalytic do 100.0 2.5E-37 5.3E-42 292.5 21.3 263 122-396 1-284 (288)
286 KOG0596 Dual specificity; seri 100.0 2.6E-38 5.6E-43 300.1 14.1 253 120-396 359-626 (677)
287 cd05580 STKc_PKA Catalytic dom 100.0 2.5E-37 5.4E-42 293.0 20.8 245 122-396 1-253 (290)
288 KOG0986 G protein-coupled rece 100.0 1.2E-38 2.7E-43 295.6 11.3 249 119-392 182-436 (591)
289 cd06607 STKc_TAO Catalytic dom 100.0 4.7E-37 1E-41 293.5 22.7 247 122-397 15-267 (307)
290 cd06647 STKc_PAK_I Catalytic d 100.0 3E-37 6.5E-42 292.9 21.1 251 121-397 18-269 (293)
291 cd06630 STKc_MEKK1 Catalytic d 100.0 3E-37 6.6E-42 288.8 20.8 253 123-396 1-263 (268)
292 cd05609 STKc_MAST Catalytic do 100.0 7.2E-37 1.6E-41 292.0 23.4 259 122-403 1-276 (305)
293 cd06658 STKc_PAK5 Catalytic do 100.0 8.5E-38 1.9E-42 296.4 16.2 248 124-397 24-272 (292)
294 cd07860 STKc_CDK2_3 Catalytic 100.0 3.4E-37 7.3E-42 291.1 20.2 262 123-396 1-280 (284)
295 cd07841 STKc_CDK7 Catalytic do 100.0 6.8E-37 1.5E-41 291.1 22.2 262 123-397 1-282 (298)
296 KOG0200 Fibroblast/platelet-de 100.0 1.1E-37 2.4E-42 320.8 17.9 266 116-401 290-579 (609)
297 cd08530 STKc_CNK2-like Catalyt 100.0 2.2E-37 4.7E-42 287.6 18.2 251 123-397 1-253 (256)
298 cd07843 STKc_CDC2L1 Catalytic 100.0 7.4E-37 1.6E-41 290.2 21.9 262 122-396 5-289 (293)
299 KOG4279 Serine/threonine prote 100.0 3.2E-38 6.9E-43 305.7 12.4 244 129-396 582-831 (1226)
300 KOG0584 Serine/threonine prote 100.0 3.7E-38 8.1E-43 304.2 12.8 249 127-401 45-302 (632)
301 KOG0574 STE20-like serine/thre 100.0 1.6E-39 3.5E-44 287.1 3.1 243 124-396 35-282 (502)
302 cd07836 STKc_Pho85 Catalytic d 100.0 7.7E-37 1.7E-41 288.6 21.2 263 123-396 1-280 (284)
303 cd06614 STKc_PAK Catalytic dom 100.0 5.6E-37 1.2E-41 290.0 20.3 252 120-396 17-269 (286)
304 cd06659 STKc_PAK6 Catalytic do 100.0 6.6E-37 1.4E-41 291.0 20.5 245 127-397 26-271 (297)
305 cd08225 STKc_Nek5 Catalytic do 100.0 2.7E-37 5.8E-42 287.2 17.3 251 123-397 1-254 (257)
306 cd07831 STKc_MOK Catalytic dom 100.0 1.5E-36 3.2E-41 286.3 21.9 258 124-396 1-278 (282)
307 cd05122 PKc_STE Catalytic doma 100.0 1.2E-36 2.7E-41 281.3 20.9 249 123-396 1-250 (253)
308 cd05572 STKc_cGK_PKG Catalytic 100.0 9E-37 1.9E-41 284.7 20.1 243 130-396 1-251 (262)
309 cd08215 STKc_Nek Catalytic dom 100.0 7.6E-37 1.6E-41 283.9 19.5 252 123-396 1-254 (258)
310 cd07837 STKc_CdkB_plant Cataly 100.0 1.9E-36 4.2E-41 287.6 22.7 265 122-396 1-290 (295)
311 cd07849 STKc_ERK1_2_like Catal 100.0 4.8E-37 1E-41 297.2 18.8 263 121-397 4-292 (336)
312 cd07840 STKc_CDK9_like Catalyt 100.0 1.1E-36 2.5E-41 287.6 21.0 261 124-396 1-283 (287)
313 PHA03210 serine/threonine kina 100.0 4.9E-37 1.1E-41 311.2 19.6 273 120-397 146-454 (501)
314 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-36 3.6E-41 291.1 22.3 248 124-400 27-280 (317)
315 KOG0667 Dual-specificity tyros 100.0 4.7E-37 1E-41 299.1 18.4 196 122-329 186-390 (586)
316 KOG1024 Receptor-like protein 100.0 1.5E-37 3.2E-42 283.6 13.5 267 113-400 275-554 (563)
317 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-36 3.3E-41 291.1 21.2 270 123-396 1-312 (316)
318 cd05633 STKc_GRK3 Catalytic do 100.0 1.9E-36 4.1E-41 285.3 21.4 243 129-397 1-255 (279)
319 cd07864 STKc_CDK12 Catalytic d 100.0 2.5E-36 5.5E-41 287.7 22.3 266 119-396 4-298 (302)
320 KOG0690 Serine/threonine prote 100.0 6.6E-38 1.4E-42 279.6 10.6 243 119-389 165-411 (516)
321 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-36 3E-41 287.2 20.2 248 123-396 20-268 (285)
322 cd05578 STKc_Yank1 Catalytic d 100.0 3.1E-37 6.7E-42 287.2 15.2 248 123-395 1-253 (258)
323 cd07835 STKc_CDK1_like Catalyt 100.0 1.6E-36 3.4E-41 286.4 20.1 262 124-396 1-279 (283)
324 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-36 3.3E-41 288.5 20.1 256 121-399 14-275 (296)
325 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.4E-36 5.2E-41 282.2 20.9 250 122-396 2-260 (264)
326 PHA02882 putative serine/threo 100.0 2.6E-36 5.5E-41 286.6 20.4 260 120-399 10-294 (294)
327 cd06606 STKc_MAPKKK Catalytic 100.0 4.8E-36 1E-40 278.6 21.8 251 123-396 1-256 (260)
328 KOG1035 eIF-2alpha kinase GCN2 100.0 2.5E-37 5.4E-42 316.7 14.2 251 121-396 478-870 (1351)
329 cd07850 STKc_JNK Catalytic dom 100.0 3.7E-36 8E-41 293.0 21.9 266 120-397 14-311 (353)
330 cd08226 PK_STRAD_beta Pseudoki 100.0 7.2E-36 1.6E-40 288.0 23.5 261 128-397 4-308 (328)
331 cd07845 STKc_CDK10 Catalytic d 100.0 4.6E-36 9.9E-41 287.0 21.6 263 121-396 6-289 (309)
332 cd05577 STKc_GRK Catalytic dom 100.0 3.3E-36 7.1E-41 283.4 19.9 242 130-393 1-245 (277)
333 KOG4645 MAPKKK (MAP kinase kin 100.0 3E-38 6.4E-43 325.0 6.0 253 121-397 1234-1494(1509)
334 cd05579 STKc_MAST_like Catalyt 100.0 1.5E-36 3.2E-41 283.3 17.0 248 130-401 1-258 (265)
335 KOG4250 TANK binding protein k 100.0 6.4E-37 1.4E-41 299.2 15.0 201 123-329 14-226 (732)
336 cd07865 STKc_CDK9 Catalytic do 100.0 7.8E-36 1.7E-40 285.3 22.2 264 121-396 11-306 (310)
337 PLN00009 cyclin-dependent kina 100.0 7.3E-36 1.6E-40 283.5 21.5 262 122-396 2-283 (294)
338 cd06634 STKc_TAO2 Catalytic do 100.0 4.5E-36 9.8E-41 286.9 20.2 249 123-400 16-270 (308)
339 cd08216 PK_STRAD Pseudokinase 100.0 9.8E-36 2.1E-40 285.3 22.5 258 129-396 9-294 (314)
340 cd07830 STKc_MAK_like Catalyti 100.0 5.7E-36 1.2E-40 282.5 20.2 265 124-396 1-279 (283)
341 cd05583 STKc_MSK_N N-terminal 100.0 6.5E-36 1.4E-40 283.0 20.4 259 123-403 1-269 (288)
342 cd05118 STKc_CMGC Catalytic do 100.0 1.2E-35 2.5E-40 280.3 21.9 260 124-396 1-279 (283)
343 cd06627 STKc_Cdc7_like Catalyt 100.0 7.8E-36 1.7E-40 276.7 20.0 248 123-396 1-250 (254)
344 cd08222 STKc_Nek11 Catalytic d 100.0 3E-36 6.6E-41 280.8 17.3 251 123-396 1-256 (260)
345 PHA03390 pk1 serine/threonine- 100.0 2.9E-35 6.4E-40 275.4 23.7 247 117-396 9-261 (267)
346 cd05611 STKc_Rim15_like Cataly 100.0 6.8E-36 1.5E-40 278.5 19.3 246 128-400 2-251 (260)
347 cd06633 STKc_TAO3 Catalytic do 100.0 1.4E-35 3.1E-40 284.0 22.0 245 124-397 23-273 (313)
348 KOG0586 Serine/threonine prote 100.0 1.6E-36 3.4E-41 292.6 15.2 250 121-400 55-309 (596)
349 cd05613 STKc_MSK1_N N-terminal 100.0 1.5E-35 3.2E-40 280.8 21.7 252 123-396 1-267 (290)
350 cd07838 STKc_CDK4_6_like Catal 100.0 3.1E-35 6.7E-40 277.9 23.7 261 124-396 1-283 (287)
351 cd07866 STKc_BUR1 Catalytic do 100.0 8.5E-36 1.9E-40 285.2 19.7 264 121-396 7-307 (311)
352 KOG0579 Ste20-like serine/thre 100.0 1.6E-37 3.5E-42 298.0 7.7 252 122-397 32-289 (1187)
353 cd07855 STKc_ERK5 Catalytic do 100.0 6.2E-36 1.4E-40 289.2 18.9 264 121-397 4-294 (334)
354 cd06657 STKc_PAK4 Catalytic do 100.0 5.5E-36 1.2E-40 284.0 17.5 243 128-396 26-269 (292)
355 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.2E-35 2.6E-40 286.3 19.9 267 118-397 6-288 (328)
356 cd05606 STKc_beta_ARK Catalyti 100.0 1.4E-35 3.1E-40 279.2 19.9 242 129-396 1-254 (278)
357 cd07852 STKc_MAPK15 Catalytic 100.0 1.4E-35 3.1E-40 287.1 20.4 264 120-397 5-295 (337)
358 cd07834 STKc_MAPK Catalytic do 100.0 1.4E-35 3.1E-40 286.2 20.3 261 123-396 1-288 (330)
359 KOG1006 Mitogen-activated prot 100.0 3.9E-38 8.5E-43 274.0 1.8 256 124-396 66-326 (361)
360 cd05581 STKc_PDK1 Catalytic do 100.0 5.2E-36 1.1E-40 282.1 16.2 249 122-396 1-276 (280)
361 KOG0612 Rho-associated, coiled 100.0 6.9E-37 1.5E-41 311.2 10.6 293 113-432 66-369 (1317)
362 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.2E-35 2.7E-40 287.5 18.6 263 121-397 4-291 (337)
363 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.4E-35 9.6E-40 284.4 22.1 268 113-397 8-300 (345)
364 cd07829 STKc_CDK_like Catalyti 100.0 3.9E-35 8.4E-40 276.5 20.4 260 124-396 1-278 (282)
365 PTZ00024 cyclin-dependent prot 100.0 4.4E-35 9.5E-40 283.5 21.3 262 122-396 8-312 (335)
366 cd07879 STKc_p38delta_MAPK13 C 100.0 8.7E-35 1.9E-39 282.1 22.2 258 121-397 14-297 (342)
367 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-34 2.4E-39 281.4 22.8 263 120-396 13-297 (343)
368 KOG0614 cGMP-dependent protein 100.0 7.4E-37 1.6E-41 287.1 6.1 298 122-445 420-727 (732)
369 KOG0604 MAP kinase-activated p 100.0 2.5E-35 5.3E-40 260.6 14.6 253 121-397 60-322 (400)
370 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.5E-35 7.5E-40 284.9 17.1 261 122-396 5-299 (342)
371 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-34 2.5E-39 268.3 17.9 237 130-393 1-240 (250)
372 cd07851 STKc_p38 Catalytic dom 100.0 6.1E-35 1.3E-39 283.3 16.7 259 120-396 13-297 (343)
373 cd07857 STKc_MPK1 Catalytic do 100.0 3.6E-34 7.8E-39 276.7 21.4 285 123-435 1-316 (332)
374 KOG0666 Cyclin C-dependent kin 100.0 1.6E-35 3.5E-40 262.9 10.7 205 121-329 23-242 (438)
375 cd05576 STKc_RPK118_like Catal 100.0 3.2E-34 6.9E-39 263.6 17.8 219 133-391 4-223 (237)
376 KOG0984 Mitogen-activated prot 100.0 9.5E-35 2.1E-39 244.1 12.0 213 112-329 36-254 (282)
377 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-33 2.5E-38 295.3 22.9 146 122-274 4-152 (669)
378 KOG0662 Cyclin-dependent kinas 100.0 7.1E-34 1.5E-38 233.9 14.8 261 123-396 3-282 (292)
379 KOG0696 Serine/threonine prote 100.0 5.7E-35 1.2E-39 268.3 9.2 299 119-444 346-651 (683)
380 KOG0587 Traf2- and Nck-interac 100.0 5.7E-34 1.2E-38 283.7 16.3 257 115-396 12-281 (953)
381 KOG0603 Ribosomal protein S6 k 100.0 1.8E-34 3.9E-39 279.8 12.2 240 121-397 321-563 (612)
382 KOG0607 MAP kinase-interacting 100.0 4.5E-34 9.7E-39 254.6 13.6 266 113-396 74-360 (463)
383 KOG0671 LAMMER dual specificit 100.0 2.4E-34 5.1E-39 262.6 10.7 260 120-396 87-405 (415)
384 PLN03225 Serine/threonine-prot 100.0 4.9E-33 1.1E-37 283.8 20.7 264 120-397 130-450 (566)
385 KOG4236 Serine/threonine prote 100.0 2.1E-34 4.5E-39 271.7 8.7 244 128-396 570-818 (888)
386 KOG0608 Warts/lats-like serine 100.0 5.6E-33 1.2E-37 267.1 18.3 202 121-329 628-873 (1034)
387 KOG0669 Cyclin T-dependent kin 100.0 3.4E-35 7.5E-40 253.8 2.4 263 123-397 18-315 (376)
388 smart00220 S_TKc Serine/Threon 100.0 7.2E-33 1.6E-37 254.4 17.9 239 134-396 1-240 (244)
389 PLN03224 probable serine/threo 100.0 2.1E-32 4.5E-37 272.5 19.4 264 120-396 143-499 (507)
390 KOG1151 Tousled-like protein k 100.0 1.1E-33 2.3E-38 262.0 8.9 258 120-395 461-739 (775)
391 KOG0695 Serine/threonine prote 100.0 7.2E-33 1.6E-37 248.4 13.9 253 119-390 247-503 (593)
392 KOG1027 Serine/threonine prote 100.0 4.8E-33 1E-37 275.9 9.2 246 124-396 511-766 (903)
393 KOG0664 Nemo-like MAPK-related 100.0 1E-32 2.3E-37 241.0 7.9 264 124-400 55-346 (449)
394 cd00180 PKc Catalytic domain o 100.0 1.7E-29 3.6E-34 226.4 21.3 212 130-398 1-215 (215)
395 KOG1290 Serine/threonine prote 100.0 4.4E-30 9.6E-35 240.9 18.0 132 121-259 77-221 (590)
396 KOG1345 Serine/threonine kinas 100.0 4.9E-31 1.1E-35 230.4 8.0 254 122-400 24-287 (378)
397 KOG0668 Casein kinase II, alph 100.0 1.4E-30 3E-35 222.4 10.3 256 121-396 37-321 (338)
398 KOG0665 Jun-N-terminal kinase 100.0 4.3E-30 9.4E-35 229.6 11.9 263 122-397 17-310 (369)
399 KOG1152 Signal transduction se 100.0 4.3E-30 9.4E-35 245.2 9.1 196 123-328 562-770 (772)
400 smart00221 STYKc Protein kinas 100.0 2E-28 4.3E-33 222.5 19.1 199 124-328 1-201 (225)
401 KOG0576 Mitogen-activated prot 100.0 3E-30 6.4E-35 250.1 5.0 254 120-396 13-270 (829)
402 KOG0670 U4/U6-associated splic 100.0 1.1E-28 2.4E-33 232.9 9.1 202 117-328 427-636 (752)
403 PLN00181 protein SPA1-RELATED; 99.9 2.9E-28 6.3E-33 260.7 8.4 195 175-396 28-264 (793)
404 smart00750 KIND kinase non-cat 99.9 9E-27 1.9E-31 203.8 13.7 166 204-400 1-168 (176)
405 KOG1167 Serine/threonine prote 99.9 3.9E-27 8.4E-32 218.3 10.7 197 119-328 33-279 (418)
406 KOG0195 Integrin-linked kinase 99.9 1.6E-26 3.5E-31 202.3 6.7 248 127-401 195-446 (448)
407 PRK09188 serine/threonine prot 99.9 7.1E-25 1.5E-29 209.8 14.9 167 118-302 14-195 (365)
408 KOG1164 Casein kinase (serine/ 99.9 1.5E-23 3.3E-28 201.0 20.6 260 123-403 19-299 (322)
409 COG0515 SPS1 Serine/threonine 99.9 9E-22 2E-26 188.6 23.6 262 124-397 2-275 (384)
410 KOG0590 Checkpoint kinase and 99.9 5E-24 1.1E-28 217.1 6.8 254 126-397 322-585 (601)
411 KOG1165 Casein kinase (serine/ 99.9 3.4E-22 7.4E-27 180.0 16.3 200 121-330 27-239 (449)
412 KOG1163 Casein kinase (serine/ 99.9 1.3E-22 2.9E-27 175.0 10.2 260 120-400 13-283 (341)
413 KOG1023 Natriuretic peptide re 99.9 6.9E-22 1.5E-26 192.6 12.7 216 174-403 2-226 (484)
414 cd05147 RIO1_euk RIO kinase fa 99.9 1.7E-21 3.6E-26 171.7 13.6 140 127-276 2-167 (190)
415 KOG1240 Protein kinase contain 99.9 1.3E-22 2.7E-27 207.3 6.8 260 123-410 24-304 (1431)
416 PRK10359 lipopolysaccharide co 99.9 6.8E-22 1.5E-26 176.2 9.7 174 119-322 28-217 (232)
417 cd05145 RIO1_like RIO kinase f 99.9 1.6E-20 3.4E-25 166.1 15.3 140 127-277 2-168 (190)
418 PF14531 Kinase-like: Kinase-l 99.8 1E-20 2.2E-25 173.7 13.8 232 126-388 16-288 (288)
419 KOG4158 BRPK/PTEN-induced prot 99.8 5.7E-21 1.2E-25 175.9 11.1 199 176-400 273-513 (598)
420 PRK12274 serine/threonine prot 99.8 6.7E-20 1.5E-24 159.9 15.0 184 126-328 6-208 (218)
421 KOG0603 Ribosomal protein S6 k 99.8 5.9E-21 1.3E-25 186.1 6.0 234 130-400 2-243 (612)
422 KOG1166 Mitotic checkpoint ser 99.8 4.2E-20 9.1E-25 192.2 8.8 201 115-326 691-902 (974)
423 PRK10345 hypothetical protein; 99.8 1.5E-18 3.2E-23 154.4 13.9 136 124-273 4-156 (210)
424 smart00090 RIO RIO-like kinase 99.8 4.1E-18 9E-23 155.2 13.5 142 123-276 29-198 (237)
425 PRK14879 serine/threonine prot 99.8 8.4E-18 1.8E-22 151.5 13.8 135 128-275 2-143 (211)
426 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.8E-19 6.1E-24 171.3 3.2 174 193-394 330-509 (516)
427 cd05144 RIO2_C RIO kinase fami 99.8 1.3E-17 2.9E-22 148.5 13.8 138 123-277 16-176 (198)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 1.6E-17 3.4E-22 148.3 12.4 131 129-275 1-138 (199)
429 PRK09605 bifunctional UGMP fam 99.7 2.8E-17 6E-22 168.3 14.7 137 122-275 333-476 (535)
430 KOG0606 Microtubule-associated 99.7 5.4E-18 1.2E-22 173.6 7.9 210 121-391 82-306 (1205)
431 cd05120 APH_ChoK_like Aminogly 99.7 1.6E-15 3.5E-20 128.5 13.8 134 127-275 3-138 (155)
432 cd05119 RIO RIO kinase family, 99.6 1.3E-15 2.8E-20 134.5 12.2 137 127-277 2-165 (187)
433 KOG0590 Checkpoint kinase and 99.6 4.9E-17 1.1E-21 166.1 1.1 255 122-396 20-285 (601)
434 PRK01723 3-deoxy-D-manno-octul 99.6 6.4E-15 1.4E-19 134.6 14.1 136 127-275 36-191 (239)
435 KOG1266 Protein kinase [Signal 99.6 3.2E-15 7E-20 135.2 5.3 206 169-397 117-331 (458)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 2.9E-13 6.4E-18 134.2 13.9 141 128-277 123-308 (437)
437 KOG0601 Cyclin-dependent kinas 99.5 4.8E-14 1E-18 138.1 6.8 249 122-396 114-378 (524)
438 KOG1243 Protein kinase [Genera 99.4 6.3E-12 1.4E-16 124.6 17.9 236 144-410 35-272 (690)
439 cd05151 ChoK Choline Kinase (C 99.4 3E-12 6.4E-17 111.0 10.4 130 128-275 4-136 (170)
440 PRK04750 ubiB putative ubiquin 99.4 7.4E-13 1.6E-17 133.0 7.2 146 122-278 120-316 (537)
441 cd05146 RIO3_euk RIO kinase fa 99.3 7.8E-11 1.7E-15 103.1 14.5 137 128-277 3-175 (197)
442 cd05154 ACAD10_11_like Acyl-Co 99.3 1.2E-10 2.5E-15 105.5 14.0 143 128-275 4-206 (223)
443 KOG0601 Cyclin-dependent kinas 99.2 1.4E-11 3E-16 121.0 5.4 248 120-400 263-517 (524)
444 COG4248 Uncharacterized protei 99.2 5.3E-10 1.2E-14 105.2 14.4 290 126-429 15-328 (637)
445 COG3642 Mn2+-dependent serine/ 99.2 5.3E-10 1.2E-14 94.6 12.5 132 128-275 2-140 (204)
446 KOG3741 Poly(A) ribonuclease s 99.2 1.2E-09 2.6E-14 105.4 15.9 171 134-326 288-475 (655)
447 KOG3087 Serine/threonine prote 99.1 9.2E-10 2E-14 92.7 12.1 144 126-275 11-165 (229)
448 KOG0606 Microtubule-associated 99.1 1.9E-11 4.2E-16 126.2 1.4 251 118-392 800-1084(1205)
449 PF01163 RIO1: RIO1 family; I 99.1 2.5E-09 5.4E-14 93.3 12.5 126 137-276 1-156 (188)
450 PRK15123 lipopolysaccharide co 99.0 1.3E-08 2.7E-13 94.2 15.1 141 128-274 28-193 (268)
451 COG0478 RIO-like serine/threon 99.0 6.2E-09 1.3E-13 93.4 12.1 136 124-275 93-251 (304)
452 KOG2137 Protein kinase [Signal 98.9 5.2E-10 1.1E-14 111.6 0.8 150 230-396 106-264 (700)
453 PF06293 Kdo: Lipopolysacchari 98.7 2.4E-07 5.1E-12 82.9 11.2 104 165-275 57-170 (206)
454 COG0661 AarF Predicted unusual 98.6 3.1E-07 6.7E-12 92.1 11.3 142 128-278 131-317 (517)
455 PRK09902 hypothetical protein; 98.6 1.3E-06 2.8E-11 76.8 13.5 138 130-274 26-178 (216)
456 COG1718 RIO1 Serine/threonine 98.5 1.9E-06 4.1E-11 76.9 12.5 153 113-277 36-217 (268)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 3.4E-06 7.3E-11 76.5 13.1 139 128-275 7-182 (226)
458 PF06176 WaaY: Lipopolysacchar 98.4 7.6E-06 1.6E-10 72.3 12.5 139 119-274 28-182 (229)
459 KOG0576 Mitogen-activated prot 98.3 1.9E-07 4.1E-12 92.7 1.1 181 128-327 248-430 (829)
460 PLN02876 acyl-CoA dehydrogenas 98.2 2.4E-05 5.2E-10 84.6 15.0 150 127-276 43-258 (822)
461 KOG1235 Predicted unusual prot 98.2 1.2E-05 2.7E-10 80.5 11.2 141 128-278 167-357 (538)
462 PF01636 APH: Phosphotransfera 98.2 1.4E-05 3E-10 72.7 10.9 143 128-274 3-196 (239)
463 cd05150 APH Aminoglycoside 3'- 98.2 2.2E-05 4.7E-10 72.2 12.2 140 130-274 6-192 (244)
464 PF12260 PIP49_C: Protein-kina 98.1 2E-05 4.4E-10 69.0 9.6 105 167-276 7-112 (188)
465 COG2112 Predicted Ser/Thr prot 98.0 5.1E-05 1.1E-09 64.2 10.0 127 127-275 27-155 (201)
466 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00023 4.9E-09 62.7 14.1 134 126-273 5-170 (199)
467 PRK10593 hypothetical protein; 97.9 0.00027 5.8E-09 67.0 14.7 79 124-206 16-100 (297)
468 KOG1035 eIF-2alpha kinase GCN2 97.9 7.5E-05 1.6E-09 79.6 10.3 197 166-399 229-436 (1351)
469 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00026 5.6E-09 64.7 11.8 32 244-275 163-194 (235)
470 cd05157 ETNK_euk Ethanolamine 97.8 0.00036 7.7E-09 63.7 12.2 142 128-275 4-201 (235)
471 PF13095 FTA2: Kinetochore Sim 97.7 0.00085 1.8E-08 58.8 12.3 126 122-273 37-206 (207)
472 TIGR02721 ycfN_thiK thiamine k 97.7 0.00046 1E-08 63.9 11.3 139 130-275 4-175 (256)
473 PRK09550 mtnK methylthioribose 97.6 0.001 2.2E-08 65.1 12.9 75 128-204 32-116 (401)
474 cd05153 HomoserineK_II Homoser 97.6 0.00067 1.4E-08 64.3 11.1 143 127-274 19-204 (296)
475 PRK05231 homoserine kinase; Pr 97.5 0.003 6.5E-08 60.5 14.1 31 244-274 186-216 (319)
476 KOG2268 Serine/threonine prote 97.4 0.00024 5.3E-09 65.9 5.5 135 123-274 93-250 (465)
477 KOG2270 Serine/threonine prote 97.4 0.0023 4.9E-08 60.7 11.6 142 126-277 148-315 (520)
478 cd05156 ChoK_euk Choline Kinas 97.4 0.0014 3E-08 62.3 10.7 141 128-274 4-212 (302)
479 KOG1826 Ras GTPase activating 97.3 5.3E-05 1.1E-09 82.6 0.1 160 168-328 1278-1441(2724)
480 TIGR00938 thrB_alt homoserine 97.3 0.011 2.4E-07 56.3 15.9 144 127-274 27-216 (307)
481 COG3173 Predicted aminoglycosi 97.3 0.0048 1E-07 58.3 12.5 148 128-277 31-230 (321)
482 PF03881 Fructosamin_kin: Fruc 97.1 0.0053 1.2E-07 57.5 11.5 73 127-204 22-97 (288)
483 cd05152 MPH2' Macrolide 2'-Pho 96.9 0.013 2.9E-07 54.7 11.8 31 245-275 185-216 (276)
484 TIGR01767 MTRK 5-methylthiorib 96.5 0.037 8E-07 53.2 11.8 73 129-203 2-84 (370)
485 PLN02756 S-methyl-5-thioribose 96.5 0.069 1.5E-06 52.3 13.6 74 127-203 37-119 (418)
486 PLN02236 choline kinase 96.5 0.036 7.7E-07 53.7 11.8 140 129-274 43-230 (344)
487 KOG1093 Predicted protein kina 96.3 0.01 2.2E-07 58.7 7.0 49 164-213 27-76 (725)
488 TIGR02906 spore_CotS spore coa 96.3 0.07 1.5E-06 50.8 12.6 29 245-274 187-215 (313)
489 PLN02421 phosphotransferase, a 96.2 0.044 9.5E-07 52.8 10.5 142 128-275 20-213 (330)
490 PF07387 Seadorna_VP7: Seadorn 96.1 0.033 7.2E-07 49.3 8.4 150 134-322 74-223 (308)
491 COG3001 Uncharacterized protei 96.0 0.11 2.4E-06 46.4 10.9 75 128-207 22-99 (286)
492 COG2334 Putative homoserine ki 95.7 0.27 5.9E-06 47.1 13.4 140 130-274 34-227 (331)
493 PRK11768 serine/threonine prot 95.6 0.32 6.9E-06 46.7 13.7 72 133-206 36-114 (325)
494 PLN03150 hypothetical protein; 95.5 0.0096 2.1E-07 62.4 3.3 36 1-36 468-504 (623)
495 PRK12396 5-methylribose kinase 95.4 0.11 2.3E-06 50.8 9.6 74 128-203 35-117 (409)
496 PRK06148 hypothetical protein; 95.4 0.26 5.7E-06 54.7 13.8 32 244-275 202-236 (1013)
497 COG5072 ALK1 Serine/threonine 95.2 0.07 1.5E-06 50.9 7.4 53 220-275 318-370 (488)
498 TIGR02904 spore_ysxE spore coa 95.2 0.19 4.1E-06 47.9 10.8 32 244-275 195-226 (309)
499 PTZ00384 choline kinase; Provi 94.3 0.44 9.6E-06 46.7 11.0 74 128-207 56-137 (383)
500 PF00560 LRR_1: Leucine Rich R 93.1 0.029 6.3E-07 30.1 0.2 17 1-18 2-18 (22)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-56 Score=430.04 Aligned_cols=290 Identities=53% Similarity=0.893 Sum_probs=255.0
Q ss_pred CccccCHHHHHHHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeee
Q 013238 108 QLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 187 (447)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 187 (447)
..+.|+++++..+|++|...+.||+|+||.||+|...+|..||||++....... ..+|.+|++++.+++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 567899999999999999999999999999999999999999999887655432 4569999999999999999999999
Q ss_pred eecCC-cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 188 CMTPT-ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 188 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
|.+.+ +.+||||||++|+|.++|+..... +++|..|.+|+.++|+||+|||+.+.+.|+|||||++|||||+++++|
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 99988 499999999999999999886544 699999999999999999999999988999999999999999999999
Q ss_pred EeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH
Q 013238 267 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 267 l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
|+|||+++..............||.+|+|||++..+..+.|+||||||++|+||+||+.+.+... ......+.+|+..
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~--~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR--PRGELSLVEWAKP 295 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC--CcccccHHHHHHH
Confidence 99999997554312211111169999999999999999999999999999999999999887533 2334459999999
Q ss_pred HhhccccccccccccC-CCCcH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 347 LLKEKKLEQLVDSDME-GNYIE-EEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
.+....+.+++|+.+. ..... .+...+..++.+|++.+|.+||+|.+|++.|+.+.
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 9998899999999987 55554 68889999999999999999999999999996543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-50 Score=383.51 Aligned_cols=256 Identities=32% Similarity=0.511 Sum_probs=209.5
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCC-cceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 200 (447)
.+...+.||+|+||+||+|.+.....||||++...... .....|.+|+.++.+++|||||+++|+|.+.. ...+||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 34444569999999999999975444999999754322 22568999999999999999999999999887 78999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-ceecCCCCCCEEECCCC-cEEEeecCCccccCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK-IIHRDVKAANILLDEEF-EAVVGDFGLAKLMDY 278 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~ 278 (447)
+++|+|..+++.. ....+++..+..++.+||+||.|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 122 ~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 9999999999874 234599999999999999999999999 7 99999999999999998 999999999987543
Q ss_pred CCCceeeccccccCcccccccc--CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.. ...+...||..|||||++. ...|+.|+||||||+++|||+||+.||.... ....... +
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~--------~~~~~~~---------v 258 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA--------PVQVASA---------V 258 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC--------HHHHHHH---------H
Confidence 32 2333367999999999999 5699999999999999999999999996421 1111111 1
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.....+...+..+...+..+|..||+.||..||++.+++..|+.+
T Consensus 259 ~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 259 VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 112222333344677899999999999999999999999999963
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-50 Score=364.59 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=212.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-cceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 200 (447)
+.+..+.||+|..|+||++.++ +++.+|+|.+.........+++.+|+++++..+||+||.++|.|.... +..++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4445678999999999999987 688999999977777777789999999999999999999999999988 49999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|.+|+|..++...+ .+++.....|+.+|++||.|||+ + +|+||||||+||||+..|++||||||.++.+...
T Consensus 160 MDgGSLd~~~k~~g----~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRVG----RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred cCCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 99999999998753 38999999999999999999996 6 9999999999999999999999999999876544
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||... ........+.+.....+..
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~---~~~~~~~~~Ll~~Iv~~pp------- 299 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP---NPPYLDIFELLCAIVDEPP------- 299 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc---CCCCCCHHHHHHHHhcCCC-------
Confidence 445567999999999999999999999999999999999999999643 1222333333333332211
Q ss_pred ccCCCCcH-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 360 DMEGNYIE-EEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 360 ~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...+. .+..++..++..||++||.+|||+.|+++
T Consensus 300 ---P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 300 ---PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ---CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11222 35677999999999999999999999987
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-50 Score=385.34 Aligned_cols=259 Identities=30% Similarity=0.455 Sum_probs=218.0
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+....+...+.||+|.||.||.|.+.....||+|.++... .....|.+|+++|++++|+|||+++|+|..+...+|||
T Consensus 203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc--cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 3334444557799999999999999877799999997653 23457889999999999999999999999988999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
|||+.|+|.++|+.... ..+.....+.++.|||+||+||+++ ++|||||.++||||+++..+||+||||++....
T Consensus 281 E~m~~GsLl~yLr~~~~--~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREG--GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EecccCcHHHHhhhcCC--CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCC
Confidence 99999999999987332 3488999999999999999999999 999999999999999999999999999996554
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
..........-+..|+|||.+..+.++.|||||||||+||||+| |+.||.. ....+.+ +.+
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~--------msn~ev~----------~~l 417 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG--------MSNEEVL----------ELL 417 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC--------CCHHHHH----------HHH
Confidence 44444444445778999999999999999999999999999999 8888843 2222222 234
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
+...+...+..++..+.++|..||..+|++|||++.+...|+...
T Consensus 418 e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 418 ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 444455566778889999999999999999999999999998753
No 5
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-46 Score=412.50 Aligned_cols=374 Identities=24% Similarity=0.421 Sum_probs=258.9
Q ss_pred CCeeeCCCCcccccCCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 013238 1 MNCRDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPPSPPPPLQPTPPGASSGNSATGAIAGGVAAGAALLFAAPAIA 80 (447)
Q Consensus 1 l~~~~ls~N~lsG~iP~~~~~~~~~~~s~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
|..||+|+|+++|.+|..+++..+...++.||...++++++.. .++............+++++ ++++++++++++.
T Consensus 573 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~---~~~c~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 648 (968)
T PLN00113 573 LVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG---LPPCKRVRKTPSWWFYITCT-LGAFLVLALVAFG 648 (968)
T ss_pred cCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccC---CCCCccccccceeeeehhHH-HHHHHHHHHHHHH
Confidence 5678888888888888888888888888888876554321111 01111111111111222222 2222222222333
Q ss_pred HHHHhcCCCCCCCCCCCCCCC-ccc---ccCCccccCHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEec
Q 013238 81 LAYWRKRKPEDHFFDVPAEED-PEV---HLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLK 155 (447)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~ 155 (447)
++++|+++.... .....+.. ... .....+.++++++ ...+...+.||+|+||.||+|... ++..||||++.
T Consensus 649 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~ 724 (968)
T PLN00113 649 FVFIRGRNNLEL-KRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEIN 724 (968)
T ss_pred HHHHHhhhcccc-cccccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEcc
Confidence 333333321110 00000000 000 0001122333333 346778889999999999999974 78999999986
Q ss_pred cccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHH
Q 013238 156 EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~ 235 (447)
..... ...|++.+++++||||++++|+|.+....++||||+++|+|.++++. ++|..+..++.|+++|
T Consensus 725 ~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~ 792 (968)
T PLN00113 725 DVNSI-----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-------LSWERRRKIAIGIAKA 792 (968)
T ss_pred CCccc-----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-------CCHHHHHHHHHHHHHH
Confidence 43321 23468889999999999999999999999999999999999999952 7899999999999999
Q ss_pred HHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHH
Q 013238 236 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGV 315 (447)
Q Consensus 236 l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ 315 (447)
|+|||..+.++++||||||+||+++.++..++. ||........ ....++..|+|||++.+..++.++|||||||
T Consensus 793 L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gv 866 (968)
T PLN00113 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGL 866 (968)
T ss_pred HHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHH
Confidence 999997666699999999999999999888875 6655432211 1224788999999999999999999999999
Q ss_pred HHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 013238 316 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG--NYIEEEVEQLIQVALLCTQGSPMERPKMSE 393 (447)
Q Consensus 316 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 393 (447)
++|||+||+.||+.. .........|++..........++|+.+.. .....+...+.+++.+||+.||++||||.+
T Consensus 867 vl~el~tg~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 943 (968)
T PLN00113 867 ILIELLTGKSPADAE---FGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAND 943 (968)
T ss_pred HHHHHHhCCCCCCcc---cCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHH
Confidence 999999999999532 123445777777666555555666665543 234566778899999999999999999999
Q ss_pred HHHHHhcCCC
Q 013238 394 VVRMLEGDGL 403 (447)
Q Consensus 394 vl~~L~~~~~ 403 (447)
+++.|+.+.-
T Consensus 944 vl~~L~~~~~ 953 (968)
T PLN00113 944 VLKTLESASR 953 (968)
T ss_pred HHHHHHHhhc
Confidence 9999997643
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-48 Score=353.91 Aligned_cols=199 Identities=27% Similarity=0.476 Sum_probs=180.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|...+.||+|.||+||+|+++ ++..||||.+.+.. .......+..|+.+|+.++|||||.+++++..++..|+|||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 57888888999999999999986 58999999997764 44455568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC------CcEEEeecCCc
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE------FEAVVGDFGLA 273 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfgl~ 273 (447)
||.||+|..+++.++. +++...+.++.|||.||++||++ +||||||||.||||+.. -.+||+|||+|
T Consensus 90 yC~gGDLs~yi~~~~~----l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGR----LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred eCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999998753 89999999999999999999999 99999999999999765 45899999999
Q ss_pred cccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 274 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 274 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
+.+. ........+|++-|||||++...+|+.|+|+||+|+|||+|++|+.||+.
T Consensus 163 R~L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 163 RFLQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhCC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9876 34445667899999999999999999999999999999999999999963
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-49 Score=359.72 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=208.0
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc------hHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG------GELQFQTEVEMISMAVHRNLLRLRGFCMTPT 192 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 192 (447)
..+.|.+.+.||+|+||.|-+|..+ +|+.||||++++..... ......+|+++|++++|||||++++++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3466788899999999999999865 69999999997654322 2234679999999999999999999999999
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC---CcEEEee
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGD 269 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~---~~~kl~D 269 (447)
..|+||||++||+|.+.+-..+. +.+..-+.++.|++.|+.|||++ ||+||||||+|||+..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~----l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY----LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc----cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecc
Confidence 99999999999999999977653 67777899999999999999999 99999999999999766 8899999
Q ss_pred cCCccccCCCCCceeeccccccCccccccccCCCC---CchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH
Q 013238 270 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS---SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 270 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
||+|+... ....+...+||+.|.|||++.+... ..+.|+||+||+||-+++|..||.... ....+.
T Consensus 323 FGlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~----~~~sl~----- 391 (475)
T KOG0615|consen 323 FGLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY----TDPSLK----- 391 (475)
T ss_pred cchhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc----CCccHH-----
Confidence 99999865 4556677899999999999977643 458899999999999999999996321 111111
Q ss_pred HhhccccccccccccC--CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 347 LLKEKKLEQLVDSDME--GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
+++...+.. ........++..++|.+||..||++|||+.|+++.=.
T Consensus 392 -------eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 392 -------EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred -------HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 122222221 2234556778899999999999999999999987533
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.8e-48 Score=370.75 Aligned_cols=248 Identities=27% Similarity=0.468 Sum_probs=209.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEE-CCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
.+|...++||+|+|.+||.++. .+|+.||+|++.+... ......+.+|+++.+.+.|||||+++++|.+.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688899999999999999998 6899999999976432 334556889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
|+|..++|..+++.+. ++++.+++.++.||+.||.|||++ +|+|||||..|+|++++.++||+|||||..+..
T Consensus 98 ELC~~~sL~el~Krrk----~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK----PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHHhcC----CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999998543 499999999999999999999999 999999999999999999999999999998875
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.... ....+||+.|+|||++....++..+||||+||++|.|++|++||+... ++..+..-+..+.
T Consensus 171 ~~Er-k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------------vkety~~Ik~~~Y-- 235 (592)
T KOG0575|consen 171 DGER-KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------------VKETYNKIKLNEY-- 235 (592)
T ss_pred cccc-cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------------HHHHHHHHHhcCc--
Confidence 5433 445789999999999999999999999999999999999999996421 1111111111111
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+........+||.++|+.||.+|||+++|+.
T Consensus 236 -----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 236 -----SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -----ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 112233445778899999999999999999986
No 9
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4e-48 Score=385.97 Aligned_cols=264 Identities=28% Similarity=0.474 Sum_probs=221.8
Q ss_pred HHHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeec
Q 013238 117 LQVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 190 (447)
Q Consensus 117 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 190 (447)
.++...+....+.||+|.||+||+|+.. +...||||.++.........+|++|++++..++|||||+|+|+|..
T Consensus 481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 3445566677788999999999999854 3568999999988777678899999999999999999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQS----------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD 260 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~ 260 (447)
.+..++|+|||..|||.++|..+... ..+++..+.+.|+.|||.||.||-++ .+|||||..+|+||.
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG 637 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence 99999999999999999999764321 33589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecCCccccCCCCCceee-ccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcc
Q 013238 261 EEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDV 338 (447)
Q Consensus 261 ~~~~~kl~Dfgl~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~ 338 (447)
++..|||+|||+++.....+..... ...-..+|||||.+..+++|++||||||||+|||+++ |+.||....
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS------- 710 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS------- 710 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc-------
Confidence 9999999999999976554443322 3335679999999999999999999999999999998 999985321
Q ss_pred cHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 339 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.++.++.+.+..+ -..+..++..++.||..||+.+|.+||++.||-..|+..
T Consensus 711 ----------n~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 711 ----------NQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred ----------hHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 1122222222222 456777889999999999999999999999999999863
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.9e-49 Score=343.17 Aligned_cols=259 Identities=24% Similarity=0.355 Sum_probs=207.7
Q ss_pred CCCCCCeeeecCCeEEEEEEE-CCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeee-eecCCc-ceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGF-CMTPTE-RLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~~~-~~lv~ 198 (447)
+|.+.++||+|.||+||++.. .+|..+|.|.++-... ......+..|+.+|++++|||||+++++ +...++ .++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 456668899999999999985 4799999999974432 3345568899999999999999999984 444555 78999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|+|.+|+|..+++.......-+++..+|+++.|++.||..+|++... -|+||||||.||+|+.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999999988777777799999999999999999999994321 39999999999999999999999999999886
Q ss_pred CCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.... .....+|||.||+||.+.+..|+.||||||+||++|||+.-..||... .+.+.-+. +.+
T Consensus 180 s~~t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--------n~~~L~~K------I~q-- 242 (375)
T KOG0591|consen 180 SKTT-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--------NLLSLCKK------IEQ-- 242 (375)
T ss_pred chhH-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--------cHHHHHHH------HHc--
Confidence 5443 345567999999999999999999999999999999999999999642 12222111 111
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
.....-........+..++..|+..||..||+.-.+++.+.
T Consensus 243 -gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 243 -GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 11111112456788999999999999999998544444443
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=342.58 Aligned_cols=245 Identities=27% Similarity=0.344 Sum_probs=203.5
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
..++|+..++||+|+||+|+.++.. +++.+|+|++++..... .......|..+|..++||+||+++..+++...+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3568999999999999999999865 58999999998765433 34568889999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
|++|+.||.|..+|++.+. +++..++.+++.|+.||.|||++ +||||||||+|||||.+|+++|+|||+++..
T Consensus 103 Vld~~~GGeLf~hL~~eg~----F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR----FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EEeccCCccHHHHHHhcCC----cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 9999999999999987653 89999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.. ........+||+.|||||++.+..|+..+|+||+|+++|||++|..||...+ ...+.......+
T Consensus 176 ~~-~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~--------~~~~~~~I~~~k----- 241 (357)
T KOG0598|consen 176 LK-DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED--------VKKMYDKILKGK----- 241 (357)
T ss_pred cc-CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc--------HHHHHHHHhcCc-----
Confidence 32 3334455789999999999999999999999999999999999999996422 223333332222
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCC
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK 390 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 390 (447)
+ ...+.-......+++...++.||.+|..
T Consensus 242 ----~-~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 242 ----L-PLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred ----C-CCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 0 0111112345778888999999999974
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-46 Score=363.99 Aligned_cols=256 Identities=27% Similarity=0.438 Sum_probs=219.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
....+.++||.|.||.|++|.++- ...||||.++....+..+.+|+.|..+|.++.||||++|.|+.......++|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 345567899999999999998762 4589999999988888888999999999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
.|||++|+|..+|+.+.+. +.+.++..++.+||.||+||-+. ++|||||..+||||+.+..+|++|||+++.+.
T Consensus 709 TEyMENGsLDsFLR~~DGq---ftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred hhhhhCCcHHHHHhhcCCc---eEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999999988754 88999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCceeecccc--ccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 278 YKDTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 278 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.......+...| ..+|.|||.+.-.+++.+||||||||++||.++ |.+||-.. .- .+..
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm--------SN----------QdVI 844 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--------SN----------QDVI 844 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc--------ch----------HHHH
Confidence 554333333323 578999999999999999999999999999887 99998421 11 1122
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..++...+-..+.+++..|.+||+.||++|-.+||.+.+++..|++.
T Consensus 845 kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 845 KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 22333444455677889999999999999999999999999999984
No 13
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-44 Score=333.05 Aligned_cols=263 Identities=25% Similarity=0.374 Sum_probs=211.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
..+.|+..+.||.|..++||+|.+. .++.||||++..+.+......+.+|+..++.++||||+.++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 3568999999999999999999865 689999999998888777778999999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
.||.+|++.+.+...-.. .+++..+..|+.++++||.|||.+ |.+|||||+.||||+++|.+||+|||.+..+..
T Consensus 104 pfMa~GS~ldIik~~~~~--Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPD--GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred hhhcCCcHHHHHHHHccc--cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 999999999999875443 399999999999999999999999 999999999999999999999999998765543
Q ss_pred CCCcee---eccccccCccccccccC--CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 279 KDTHVT---TAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 279 ~~~~~~---~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
...+.. ...+||++|||||++.. ..|+.|+|||||||+..||.+|..||...... ..+.. . +.. ..
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm----kvLl~---t-Lqn-~p 249 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM----KVLLL---T-LQN-DP 249 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH----HHHHH---H-hcC-CC
Confidence 332211 44579999999999644 36899999999999999999999999632110 00100 0 110 00
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
....-..+..+........+.+++..||+.||.+|||+.++++
T Consensus 250 p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0001112222233445568999999999999999999999986
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-45 Score=339.00 Aligned_cols=256 Identities=26% Similarity=0.418 Sum_probs=204.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCC--cceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 198 (447)
.++...+.||+|+||+||++...+ |...|||.+....... ...+.+|+.+|++++|||||+.+|...... .++++|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 356677899999999999999764 8999999997653322 456889999999999999999999755444 588999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC-CCcEEEeecCCccccC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKLMD 277 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~ 277 (447)
||+++|+|.+++...+. ++++..+..++.||++||+|||++ +++||||||+|||++. ++.+||+|||+++...
T Consensus 96 Ey~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 99999999999988764 399999999999999999999999 9999999999999999 7999999999998765
Q ss_pred C--CCCceeeccccccCccccccccCCC-CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 278 Y--KDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 278 ~--~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
. ..........||+.|||||++..+. ...++|||||||++.||+||+.||... .....++.......
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~~~~~~~ig~~~--- 239 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEEAEALLLIGRED--- 239 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cchHHHHHHHhccC---
Confidence 3 2223344567999999999998643 345999999999999999999999531 11111111111111
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..+..+........+++.+|++.||.+|||+.++++..--
T Consensus 240 ------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 240 ------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred ------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 1113334455668889999999999999999999985443
No 15
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1e-44 Score=351.17 Aligned_cols=264 Identities=28% Similarity=0.458 Sum_probs=205.5
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEE------CCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeec
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 190 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 190 (447)
.+..++|++.++||+|+||.||+|.. .+++.||||++...........+.+|++++..+ +||||+++++++..
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 45667899999999999999999974 135689999997654444455788999999999 89999999998876
Q ss_pred CC-cceEEEecccCCcchhhhhhcCC------------------------------------------------------
Q 013238 191 PT-ERLLVYPFMVNGSVASCLRERGQ------------------------------------------------------ 215 (447)
Q Consensus 191 ~~-~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 215 (447)
.+ ..+++|||+++|+|.+++.....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 54 57899999999999999875321
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc-eeeccccc
Q 013238 216 ----SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGT 290 (447)
Q Consensus 216 ----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt 290 (447)
...++++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++........ ......++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 123588889999999999999999999 9999999999999999999999999999865322211 12223456
Q ss_pred cCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHH
Q 013238 291 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEE 369 (447)
Q Consensus 291 ~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 369 (447)
..|+|||++.+..++.++|||||||++|||++ |..||..... .. ........... ...+...
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~----~~---~~~~~~~~~~~----------~~~~~~~ 302 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI----NE---EFCQRLKDGTR----------MRAPENA 302 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc----cH---HHHHHHhcCCC----------CCCCCCC
Confidence 78999999999999999999999999999997 9999953211 10 11111111100 0111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 370 VEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 370 ~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...+.+++.+||+.||.+|||+.++++.|+..
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 45688999999999999999999999999863
No 16
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=349.52 Aligned_cols=242 Identities=27% Similarity=0.465 Sum_probs=205.4
Q ss_pred CCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCC
Q 013238 125 SNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 125 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
..++-||+|+.|.||+|++. ++.||||+++... +.+++-|++++|+||+.+.|+|....-+++|||||..|
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 34567999999999999997 5789999886432 35788899999999999999999988899999999999
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 284 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 284 (447)
.|..+|+... ++.......|..+||.||.|||.+ .|||||||+-||||..+..+||+|||-++..... ...
T Consensus 198 qL~~VLka~~----~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STk 268 (904)
T KOG4721|consen 198 QLYEVLKAGR----PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STK 268 (904)
T ss_pred cHHHHHhccC----ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhh
Confidence 9999998754 478888999999999999999999 9999999999999999999999999999876543 334
Q ss_pred eccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCC
Q 013238 285 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGN 364 (447)
Q Consensus 285 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 364 (447)
..++||..|||||++.+.+.++|+||||||||||||+||.-||...+. .-.+..+-...+.-.
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds-----------------sAIIwGVGsNsL~Lp 331 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS-----------------SAIIWGVGSNSLHLP 331 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch-----------------heeEEeccCCccccc
Confidence 556799999999999999999999999999999999999999953110 011222222333444
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 365 YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 365 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.+..+++-+.-|+++||+..|..||++++++..|+-.
T Consensus 332 vPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 332 VPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred CcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 5667778888899999999999999999999999864
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.9e-45 Score=321.53 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=203.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+.|+.+.++|+|+||+||+++.+ +|+.||||++..... +...+-.++|+++|+++.|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46788889999999999999987 599999999965433 3334457899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
||+. ++.+-|+.... .++...+++++.|++.|+.|+|++ +++||||||+||||+.+|.+||||||+|+.+..
T Consensus 82 ~~dh-TvL~eLe~~p~---G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~- 153 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPN---GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA- 153 (396)
T ss_pred ecch-HHHHHHHhccC---CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-
Confidence 9977 44444444322 388999999999999999999999 999999999999999999999999999998764
Q ss_pred CCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh---------
Q 013238 280 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK--------- 349 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 349 (447)
.+..++..+.|.+|.|||.+.+ -.|....||||+||++.||++|.+.|... .+.+..-.+...+.
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~-----SDiDQLy~I~ktLG~L~prhq~i 228 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR-----SDIDQLYLIRKTLGNLIPRHQSI 228 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc-----chHHHHHHHHHHHcccCHHHHHH
Confidence 4555666778999999999987 68999999999999999999999988431 12221111111111
Q ss_pred ---ccccccccccccC-----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 ---EKKLEQLVDSDME-----GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 ---~~~~~~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
......+.-+... ....+.....+++++..|++.||.+|++-++++.
T Consensus 229 F~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 229 FSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred hccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111111111111 0112233456899999999999999999998875
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-45 Score=348.52 Aligned_cols=265 Identities=26% Similarity=0.423 Sum_probs=214.0
Q ss_pred ccCHHHHHHHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeee
Q 013238 111 RFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCM 189 (447)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 189 (447)
+.+..++++..+.+.+...||+|.||+||+|.+.+ .||||+++.... .+..+.|++|+.++++-+|.||+-+.|+|.
T Consensus 381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred CccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 34567788888888899999999999999999863 499999976543 334567999999999999999999999999
Q ss_pred cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEee
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 269 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 269 (447)
.+.. .+|..+|+|.+|..+++.... .++......|+.||++||.|||.+ +|||||||+.|||+.+++.|||+|
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~et---kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgD 531 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQET---KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGD 531 (678)
T ss_pred CCce-eeeehhccCchhhhhccchhh---hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEec
Confidence 8877 999999999999999997653 489999999999999999999999 999999999999999999999999
Q ss_pred cCCccccCCC-CCceeeccccccCccccccccC---CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHH
Q 013238 270 FGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 345 (447)
Q Consensus 270 fgl~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 345 (447)
|||+..-..- .........|...|||||++.. .+|+..+||||||+++|||+||..||... . .
T Consensus 532 FGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~---~--------- 598 (678)
T KOG0193|consen 532 FGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-N---R--------- 598 (678)
T ss_pred ccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-C---h---------
Confidence 9998643221 1112223347788999999864 47899999999999999999999999621 0 0
Q ss_pred HHhhccccccccccccC---CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 346 GLLKEKKLEQLVDSDME---GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
+..+..+-...+. ......+.+.+.+|+..||..++++||++.+|+..|+..
T Consensus 599 ----dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 599 ----DQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred ----hheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence 1111111111111 123445677899999999999999999999999977753
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=342.26 Aligned_cols=289 Identities=23% Similarity=0.348 Sum_probs=221.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 196 (447)
..+|..++.||.|+|++|++|+.. .++.||||++.+.... ...+.+..|-+.|.+| .||.|++|+-.|++...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 458899999999999999999865 6899999999765322 2233567788888888 79999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
|+||+++|+|.++|+..+. +++...+.++.+|+.||+|||++ |||||||||+|||||++|++||+|||.|+.+
T Consensus 152 vLe~A~nGdll~~i~K~Gs----fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGS----FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEecCCCcHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999988753 89999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCc----------e--eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHH
Q 013238 277 DYKDTH----------V--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 277 ~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 344 (447)
...... . ....+||..|.+||++..+..+..+|||+||||||.|+.|.+||...+ +....+
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-----eyliFq-- 297 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-----EYLIFQ-- 297 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-----HHHHHH--
Confidence 643221 1 144789999999999999999999999999999999999999996422 111111
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcCCCchhhHHHHHhhhhhccCCC
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR--MLEGDGLAERWEEWQKEEMFRQDFNH 422 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~~~~~~~~~~~~~~~~~~~~ 422 (447)
..++ ++-. ++....+...+|+.+.|..||.+|+|..++-+ +++++.++. .+.+.++.
T Consensus 298 -kI~~-------l~y~----fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n---------lw~~~PP~ 356 (604)
T KOG0592|consen 298 -KIQA-------LDYE----FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN---------LWQQTPPK 356 (604)
T ss_pred -HHHH-------hccc----CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh---------hhhcCCCc
Confidence 1110 1112 22233466888999999999999999977665 334433322 45555554
Q ss_pred -CCCCCCcccc-cCCCcccCCccC
Q 013238 423 -TPHPNNTWIV-DSTSHIQPDELS 444 (447)
Q Consensus 423 -~~~~~~~~~~-~~~~~~~~~~~~ 444 (447)
-|+...+... +.++...++|.+
T Consensus 357 l~py~p~~~~s~e~~s~~~~~~~~ 380 (604)
T KOG0592|consen 357 LQPYKPATSISPEYYSAYTPLEPG 380 (604)
T ss_pred ccCCCCcccCCcccCcccccccCC
Confidence 4444444433 333444444433
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-44 Score=338.39 Aligned_cols=264 Identities=22% Similarity=0.326 Sum_probs=209.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 196 (447)
.+.|+.+++||+|.||.||+|+.. +|+.||+|++..+.. +.......+|+.+|++++||||++|.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 456888899999999999999864 799999999986653 33455678999999999999999999998876 68899
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
|+|||+. +|.-++...+. .+++.+++.++.|++.||.|+|++ +|+|||||.+|||||.+|.+||+|||||+++
T Consensus 196 VFeYMdh-DL~GLl~~p~v---kft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGV---KFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhcCCCc---ccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 9999976 88888876443 399999999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
........+..+-|.+|.|||.+.|. .|+.+.|+||.||||.||++|++.|... .+......+..+........
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~-----tEveQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR-----TEVEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc-----cHHHHHHHHHHHhCCCChhc
Confidence 87777777888899999999998875 6899999999999999999999998531 22222222222211111000
Q ss_pred c----------cccccC-----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 356 L----------VDSDME-----GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 356 ~----------~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+ +.+... .+.........++|+..+|..||.+|.|+.++++
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 000000 0001223456788999999999999999998886
No 21
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-45 Score=374.68 Aligned_cols=261 Identities=30% Similarity=0.455 Sum_probs=215.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC--Cc----EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCc
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTD--GS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 193 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 193 (447)
...+.+..+.||+|.||.||.|.+.+ |. .||||.++.........+|.+|..+|+.++|||||+++|+|.+...
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 35667778899999999999998653 33 5999999888778888899999999999999999999999999999
Q ss_pred ceEEEecccCCcchhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 194 RLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
.++++|||++|+|..+|++.+. ....++..+.+.++.+||+|+.||+++ ++|||||..+|+||+....+||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 9999999999999999987522 234589999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCceeecc-ccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHh
Q 013238 271 GLAKLMDYKDTHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
|+|+.+...+....... .-...|||||.+..+.++.|+|||||||+|||++| |..||..- .-.+......
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~--------~n~~v~~~~~ 918 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR--------SNFEVLLDVL 918 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc--------chHHHHHHHH
Confidence 99995543333222222 34578999999999999999999999999999999 88888421 1111112222
Q ss_pred hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 349 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 349 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
... +-..+..+++.++++|.+||+.+|++||++..+++.++.+
T Consensus 919 ~gg----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 919 EGG----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred hCC----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 222 2234566788899999999999999999999999977764
No 22
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.3e-43 Score=308.32 Aligned_cols=263 Identities=24% Similarity=0.330 Sum_probs=210.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|...++||+|.||+||+|++. +|+.||||+++..... .......+|++.|+.++|+||+.+++++.......+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46778889999999999999865 7999999999865433 334568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
||+. +|...++.... .++...++.++.++++||+|||++ .|+||||||.|+|++++|.+||+|||+++.+...
T Consensus 82 fm~t-dLe~vIkd~~i---~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNI---ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhccccc---ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9955 89999976543 489999999999999999999999 9999999999999999999999999999988654
Q ss_pred CCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
..... ..+.|.+|.|||.+.|. .|+...|+||.|||+.||+-|.+-|.. ..+.+....+...+......++-+
T Consensus 155 ~~~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG-----~sDidQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 155 NRIQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG-----DSDIDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred Ccccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC-----CchHHHHHHHHHHcCCCCcccCcc
Confidence 44333 33579999999988775 689999999999999999998876632 233344444444444444333322
Q ss_pred cccC--------------CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 359 SDME--------------GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 359 ~~~~--------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
-.-. ......+....++++..++..||.+|+|+.|+++.
T Consensus 229 ~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 229 MTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 2111 11223345667999999999999999999988753
No 23
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=338.18 Aligned_cols=264 Identities=24% Similarity=0.327 Sum_probs=208.0
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCC-cceE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPT-ERLL 196 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~l 196 (447)
..++|...++||.|.||.||+|+.. +|..||||+++.......+-.-++|+..|++++ |||||++.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 4568888899999999999999865 689999999987654433444678999999999 999999999998877 8999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
||||| ..+|.++++.+ ..++++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.+
T Consensus 88 VfE~M-d~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFM-DCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhh-hhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 99999 55999999876 34699999999999999999999999 9999999999999999889999999999976
Q ss_pred CCCCCceeeccccccCcccccccc-CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
..... .+..+.|.+|.|||++. .+.|+.+.||||+|||++|+.+-++.|-+.+ +.+..-.+-..+.......
T Consensus 161 ~SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-----E~Dqi~KIc~VLGtP~~~~ 233 (538)
T KOG0661|consen 161 RSKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS-----EIDQIYKICEVLGTPDKDS 233 (538)
T ss_pred ccCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc-----HHHHHHHHHHHhCCCcccc
Confidence 54433 45567899999999875 5678999999999999999999999884321 1111111112221111111
Q ss_pred ccc------------cccCC----CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 356 LVD------------SDMEG----NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 356 ~~d------------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+.. +...+ ...........+++.+|++.||.+|||+.+.++.
T Consensus 234 ~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 234 WPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred chhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111 00111 1123366778999999999999999999999873
No 24
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-44 Score=314.26 Aligned_cols=238 Identities=24% Similarity=0.348 Sum_probs=199.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
.++|+..+.||.|+||+|.+++.+ +|..+|+|++.+...- .......+|..+|+.+.||+++++.+.+.+.+..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 357888899999999999999976 6899999999765432 2234577899999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||.+||.|..+++..+. +++..++.++.+|+.||+|||+. +|++|||||+|||||.+|.+||+|||+|+...
T Consensus 123 meyv~GGElFS~Lrk~~r----F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR----FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVS 195 (355)
T ss_pred EeccCCccHHHHHHhcCC----CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence 999999999999987653 89999999999999999999999 99999999999999999999999999999764
Q ss_pred CCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.. ....+||+.|+|||++....++.++|.|||||++|||+.|..||..... .. ..+.++
T Consensus 196 ~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~---------iY~KI~ 254 (355)
T KOG0616|consen 196 GR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQ---------IYEKIL 254 (355)
T ss_pred Cc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HH---------HHHHHH
Confidence 32 5567899999999999999999999999999999999999999953211 11 111122
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCC
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMER 388 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 388 (447)
...+ .++......+.+|+...++.|-.+|
T Consensus 255 ~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 255 EGKV--KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred hCcc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 2221 2334445567888888889998888
No 25
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=337.13 Aligned_cols=269 Identities=23% Similarity=0.367 Sum_probs=220.4
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
+++.+...+.++||+|.||.|.++....+.+||||.++.......+.+|.+|+++|.+++||||+.++|+|..++..+++
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI 613 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI 613 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence 45566778889999999999999999888999999999988888888999999999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
+|||++|+|.+++..+.... +.-.....|+.||+.||+||.+. ++|||||.++|+|+|.++++||+|||+++.+.
T Consensus 614 ~EYmEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccc
Confidence 99999999999998764322 34555677999999999999998 99999999999999999999999999999665
Q ss_pred CCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh--CCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 278 YKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT--GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 278 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
..+.. .....+-..+|||+|.+..++++.++|||+||+++||+++ ...||.... +...++-...+++.....
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt-----~e~vven~~~~~~~~~~~ 763 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT-----DEQVVENAGEFFRDQGRQ 763 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh-----HHHHHHhhhhhcCCCCcc
Confidence 44433 3334456789999999999999999999999999999865 778885311 111222222333322222
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
.+ ...+.-++..++++|..||..+-.+|||++++...|.+..
T Consensus 764 ~~------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 764 VV------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred ee------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 21 1234456778999999999999999999999999988654
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-44 Score=342.58 Aligned_cols=259 Identities=21% Similarity=0.328 Sum_probs=212.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
..|....+||+|..|.||.|... +++.||||++...... ...-+.+|+.+|+..+|+|||++++.+...++.|+||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 46777789999999999999854 6889999999765433 344578999999999999999999999888999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
|++|+|.+.+.... +++.++..|+.++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+....
T Consensus 352 m~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred cCCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 99999999997654 89999999999999999999999 99999999999999999999999999998876544
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc-c
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD-S 359 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~ 359 (447)
. .....+||+.|||||++....|..|.||||||++++||+-|.+||-... . + +.++ -+.+ .
T Consensus 424 ~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~----P---l----rAly------LIa~ng 485 (550)
T KOG0578|consen 424 S-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN----P---L----RALY------LIATNG 485 (550)
T ss_pred C-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC----h---H----HHHH------HHhhcC
Confidence 4 3445569999999999999999999999999999999999999993211 0 0 0000 0001 1
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcCCCchhh
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR--MLEGDGLAERW 407 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~~~~~ 407 (447)
...-.........+.+++.+||+.|+.+|+++.|||+ +|......++-
T Consensus 486 ~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ssL 535 (550)
T KOG0578|consen 486 TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESSL 535 (550)
T ss_pred CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHHh
Confidence 1112234445667899999999999999999999998 66555544443
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.5e-43 Score=336.05 Aligned_cols=247 Identities=26% Similarity=0.414 Sum_probs=211.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|...+.||+|.||+||+|+-+ +.+.||+|.+.+... +.....+.+|+++++.++||||+.++++|....+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777889999999999999866 588999999976543 3344568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+.| +|..+|...+. ++++.+..++.+++.||.|||++ +|+|||+||.|||++.+|.+|++|||+++.+..
T Consensus 82 ~a~g-~L~~il~~d~~----lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK----LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9966 99999987653 89999999999999999999999 999999999999999999999999999998764
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
.....+.+.||+.|||||++.+..|+..+|+||+|||+||+.+|++||-. .++...++....+..
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a--------~si~~Lv~~I~~d~v------- 217 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA--------RSITQLVKSILKDPV------- 217 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH--------HHHHHHHHHHhcCCC-------
Confidence 44556777899999999999999999999999999999999999999943 123344444433321
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+.+....+..++...+.+||..|.|..+++.
T Consensus 218 ----~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 ----KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ----CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 123355667888999999999999999998875
No 28
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.8e-43 Score=326.92 Aligned_cols=256 Identities=23% Similarity=0.336 Sum_probs=204.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC----CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
.++|++.+.||+|+||.||+|.+. .+..||+|.++..........+.+|+.++.+++||||+++++++......++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 457888899999999999999753 3568999999865444445578899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+|||++.++.++++|||.+...
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 999999999999987643 2489999999999999999999999 9999999999999999999999999987653
Q ss_pred CCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
............++..|+|||++.+..++.++|||||||++||+++ |..||.... ..+......+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--------~~~~~~~~~~~----- 224 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--------GQDVIKAVEDG----- 224 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHHHCC-----
Confidence 2221111112234678999999999999999999999999999775 999995311 11111111111
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.....+..++..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 225 -----~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 225 -----FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 0111122345678999999999999999999999999875
No 29
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-44 Score=332.01 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=213.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
..|+..+.||+|.||.||+|.+. .++.||+|++..+..+.....+++|+.++..++++||.++++.+.....++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 35777789999999999999875 68899999998877777777899999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
|.||++.+.|+... .+.+..+.-|+.+++.||.|||++ +.+|||||+.|||+..+|.+|++|||.+..+....
T Consensus 93 ~~gGsv~~lL~~~~----~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN----ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhccCC----CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 99999999997643 247778888899999999999999 99999999999999999999999999998776544
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
... ...+||+.|||||++.+..|+.|+||||||++.+||++|.+|+... ...+..-++-..
T Consensus 166 ~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~------------------hPmrvlflIpk~ 226 (467)
T KOG0201|consen 166 KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL------------------HPMRVLFLIPKS 226 (467)
T ss_pred hcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc------------------CcceEEEeccCC
Confidence 443 5567999999999999889999999999999999999999999421 111222222222
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhc
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR--MLEG 400 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~ 400 (447)
-.+.....+...+.+++..||+.||+.|||+.++++ ++..
T Consensus 227 ~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 227 APPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred CCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 222223355667999999999999999999999997 5555
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=333.91 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=204.7
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc----chHHHHHHHHHHHHhcC-CCceeeEeeeeecCC
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ----GGELQFQTEVEMISMAV-HRNLLRLRGFCMTPT 192 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 192 (447)
...++|...+.||+|.||+|++|... +++.||+|++...... .....+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568999999999999999999865 6899999977653111 23445778999999999 999999999999999
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEeecC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFG 271 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg 271 (447)
..++||||+.+|+|.+++...+ ++.+.....++.|++.|++|+|++ +|+||||||+|||+|.+ +++||+|||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g----~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKG----RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcC----CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 9999999999999999998733 388899999999999999999999 99999999999999999 999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCC-CC-chhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SS-EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 349 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+... ........
T Consensus 167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--------~~~l~~ki-- 235 (370)
T KOG0583|consen 167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--------VPNLYRKI-- 235 (370)
T ss_pred cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--------HHHHHHHH--
Confidence 999764 2333455567999999999999877 74 78999999999999999999996411 11111111
Q ss_pred ccccccccccccCCCCcHHH-HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 EKKLEQLVDSDMEGNYIEEE-VEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 ~~~~~~~~d~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..... ..+... ...+..++.+|+..||.+|+|+.+++.
T Consensus 236 -------~~~~~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 236 -------RKGEF--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred -------hcCCc--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 11111 111112 567889999999999999999999983
No 31
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5e-43 Score=343.51 Aligned_cols=263 Identities=25% Similarity=0.395 Sum_probs=205.3
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEE------CCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeec
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 190 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 190 (447)
.+..++|+..+.||+|+||.||+|.. .++..||||+++..........+.+|+.++..+ +||||++++++|..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34456788899999999999999963 235689999997554444455688999999999 89999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCCC------------------------------------------------------
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQS------------------------------------------------------ 216 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------ 216 (447)
....++||||+++|+|.+++......
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 99999999999999999998653210
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 217 -----------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 217 -----------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
...+++..++.++.||+.||+|||++ +++||||||+|||+++++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 12478899999999999999999999 9999999999999999999999999999865432
Q ss_pred CCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 280 DTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 280 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.... .....++..|+|||++.+..++.++|||||||++|||++ |..||.... .......++. ...
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~----~~~~~~~~~~----~~~----- 334 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP----VDSKFYKMIK----EGY----- 334 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC----chHHHHHHHH----hCc-----
Confidence 2211 122234667999999999999999999999999999998 888885311 1111111111 110
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
....+......+.+++.+||+.||++|||+.+|++.|++
T Consensus 335 ----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 335 ----RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ----cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 000111123568899999999999999999999999986
No 32
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.1e-42 Score=328.87 Aligned_cols=266 Identities=24% Similarity=0.388 Sum_probs=204.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-----------------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceee
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD-----------------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 183 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 183 (447)
.++|...+.||+|+||.||++.+.+ +..||+|.+...........+.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4578888999999999999997532 34699999976544444567899999999999999999
Q ss_pred EeeeeecCCcceEEEecccCCcchhhhhhcCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCce
Q 013238 184 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 248 (447)
Q Consensus 184 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~iv 248 (447)
+++++...+..+++|||+.+|+|.+++..... ....+++..++.++.||+.||.|||+. +++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 99999998999999999999999998865321 113478889999999999999999999 999
Q ss_pred ecCCCCCCEEECCCCcEEEeecCCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh--CCC
Q 013238 249 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT--GQR 325 (447)
Q Consensus 249 H~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt--g~~ 325 (447)
||||||+|||+++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999865433221 1222345788999999988899999999999999999987 556
Q ss_pred CcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 326 AFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 326 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
||... ........+.......... . .......++..+.+++.+||+.+|.+|||+.+|.+.|++
T Consensus 241 p~~~~-----~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGEL-----TDEQVIENAGEFFRDQGRQ-V-----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcC-----CHHHHHHHHHHHhhhcccc-c-----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 66421 1111222222221111100 0 001112334678999999999999999999999999863
No 33
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-44 Score=343.91 Aligned_cols=265 Identities=29% Similarity=0.425 Sum_probs=213.3
Q ss_pred HHHHHHHhhCCCCCCeeeecCCeEEEEEEECC--C--cE-EEEEEecc--ccccchHHHHHHHHHHHHhcCCCceeeEee
Q 013238 114 LRELQVATDNFSNRNILGRGGFGKVYKGRLTD--G--SL-VAVKRLKE--ERTQGGELQFQTEVEMISMAVHRNLLRLRG 186 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~--~--~~-vavK~~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 186 (447)
...++...++....++||+|+||.||+|++.. + .. ||||..+. ........+|..|.+++++++|||||+++|
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 33455566677777999999999999998753 2 23 89999985 344556678999999999999999999999
Q ss_pred eeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 187 FCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 187 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
++......++|||+|.||+|.++|+.... .++..++..++.+.|.||+|||++ +++||||..+|+|++.++.+|
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEE
Confidence 99999999999999999999999987654 389999999999999999999999 999999999999999999999
Q ss_pred EeecCCccccCCCCCceee-ccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHH
Q 013238 267 VGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 267 l~Dfgl~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 344 (447)
|+|||+++.... ..... ...-..+|+|||.+....++.++|||||||++||+++ |..||.... ..+..
T Consensus 303 ISDFGLs~~~~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--------~~~v~ 372 (474)
T KOG0194|consen 303 ISDFGLSRAGSQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--------NYEVK 372 (474)
T ss_pred eCccccccCCcc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--------HHHHH
Confidence 999999986431 11111 1235679999999999999999999999999999998 888985321 11111
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 403 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 403 (447)
... +....+...+...+..+..++.+||..+|++||||.++.+.|+...-
T Consensus 373 ~kI---------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 373 AKI---------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred HHH---------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 111 11122223333456678889999999999999999999999987543
No 34
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=320.31 Aligned_cols=264 Identities=28% Similarity=0.399 Sum_probs=194.9
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHH--hcCCCceeeEeeeeecCC----cceE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMIS--MAVHRNLLRLRGFCMTPT----ERLL 196 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~~----~~~l 196 (447)
.....++||+|+||.||+|.+. ++.||||++.... ...|++|-++++ .+.|+||+++++.-.... +++|
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHHH----HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 3444577999999999999996 5899999996533 346777777766 467999999998755433 7899
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhC------CCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH------CDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~------~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
|++|.+.|+|.++|..+. ++|....+|+..+++||+|||+. .+|.|+|||||++||||.+|+++.|+||
T Consensus 286 Vt~fh~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred EeeeccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 999999999999998764 89999999999999999999975 3678999999999999999999999999
Q ss_pred CCccccCCCCCc-eeeccccccCccccccccCCCC------CchhhhHHHHHHHHHHHhCCCCccc--------ccccC-
Q 013238 271 GLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKS------SEKTDVFGYGVMLLELITGQRAFDL--------ARLAN- 334 (447)
Q Consensus 271 gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~------~~~sDvwSlG~il~elltg~~p~~~--------~~~~~- 334 (447)
|+|..+...... .....+||.+|||||++.+... -.+.||||+|.|||||++...-++. +....
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 999887644322 2233679999999999976532 2468999999999999996654421 10000
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
+....+ +-++..+-.++....+...... ...+..+.+.+..||..||+.|.|+.=|.+.+..
T Consensus 441 G~hPt~-e~mq~~VV~kK~RP~~p~~W~~---h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~ 502 (534)
T KOG3653|consen 441 GNHPTL-EEMQELVVRKKQRPKIPDAWRK---HAGMAVLCETIEECWDHDAEARLTAGCVEERMAE 502 (534)
T ss_pred cCCCCH-HHHHHHHHhhccCCCChhhhhc---CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHH
Confidence 000111 1122222222211111111111 1356778999999999999999999877766654
No 35
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-42 Score=325.07 Aligned_cols=262 Identities=15% Similarity=0.250 Sum_probs=203.3
Q ss_pred CCccccCHHHHHHHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCceeeE
Q 013238 107 GQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRL 184 (447)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l 184 (447)
.+++.+...++ +......||+|++|.||+|.+ +|+.||||.++....... ...+.+|++++.+++||||+++
T Consensus 10 ~~~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~ 83 (283)
T PHA02988 10 NDIKCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI 83 (283)
T ss_pred CcceecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 34445555555 222236799999999999998 588999999976433221 3467899999999999999999
Q ss_pred eeeeec----CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC
Q 013238 185 RGFCMT----PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD 260 (447)
Q Consensus 185 ~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~ 260 (447)
+|++.+ ....+++|||+++|+|.+++.... .+++.....++.+++.||.|||+.. +++||||||+||+++
T Consensus 84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~ 157 (283)
T PHA02988 84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVT 157 (283)
T ss_pred eeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEEC
Confidence 999876 346789999999999999997643 4889999999999999999999732 788999999999999
Q ss_pred CCCcEEEeecCCccccCCCCCceeeccccccCccccccccC--CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcc
Q 013238 261 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 338 (447)
Q Consensus 261 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~ 338 (447)
+++.+||+|||+++...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 158 ~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~------- 226 (283)
T PHA02988 158 ENYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT------- 226 (283)
T ss_pred CCCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-------
Confidence 99999999999998653221 12347889999999976 678999999999999999999999996321
Q ss_pred cHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 339 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..+......... .....+......+.+++.+||+.||.+|||+.++++.|+..
T Consensus 227 -~~~~~~~i~~~~---------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 227 -TKEIYDLIINKN---------NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred -HHHHHHHHHhcC---------CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 111111111111 01111123456789999999999999999999999999863
No 36
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.2e-42 Score=340.44 Aligned_cols=264 Identities=25% Similarity=0.412 Sum_probs=205.4
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeec
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 190 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 190 (447)
....++|...+.||+|+||.||+|... ++..||||.++..........+.+|+++++.+ +|+||++++++|..
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 345668889999999999999998742 24579999997654444455688999999999 89999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCC-------------------------------------------------------
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQ------------------------------------------------------- 215 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 215 (447)
....++||||+.+|+|.+++.....
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 9999999999999999998864211
Q ss_pred -----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc-e
Q 013238 216 -----------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-V 283 (447)
Q Consensus 216 -----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~ 283 (447)
...++++..++.++.||+.||+|||++ +++||||||+|||+++++.+||+|||+++........ .
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 112478889999999999999999999 9999999999999999999999999999765332211 1
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..... ..... ...
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~----~~~~~----~~~~~---------~~~ 333 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV----NSKFY----KMVKR---------GYQ 333 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc----cHHHH----HHHHc---------ccC
Confidence 112234567999999998899999999999999999997 9999953210 00111 11111 000
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...+......+.+++.+||+.||.+|||+.+|++.|++.
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111111235688999999999999999999999999863
No 37
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.6e-42 Score=325.55 Aligned_cols=281 Identities=21% Similarity=0.252 Sum_probs=214.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999976 688999999864322 123346788999999999999999999999989999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRNSG----RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999999987643 388999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
. .....|++.|+|||++.+..++.++|||||||++|||++|+.||.... ............
T Consensus 154 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~------- 214 (291)
T cd05612 154 R----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN--------PFGIYEKILAGK------- 214 (291)
T ss_pred C----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-------
Confidence 2 123458999999999999889999999999999999999999995311 111111111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHhcCCCchhhHHHHHhhhhhccCCCCCCCCCccccc
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVD 433 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (447)
. ..+......+.+++.+||+.||.+||+ +.++++.-.-.. ..|..........+..+...+.+.||+++
T Consensus 215 --~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 288 (291)
T cd05612 215 --L--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS--VDWDDVPQRKLKPPIVPKVSHDGDTSNFD 288 (291)
T ss_pred --c--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC--CCHHHHhcCCCCCCEeCCCCCcccccccc
Confidence 0 111122346889999999999999995 777765422211 12333333333333444456666666665
Q ss_pred C
Q 013238 434 S 434 (447)
Q Consensus 434 ~ 434 (447)
+
T Consensus 289 ~ 289 (291)
T cd05612 289 D 289 (291)
T ss_pred C
Confidence 4
No 38
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-43 Score=335.11 Aligned_cols=279 Identities=27% Similarity=0.391 Sum_probs=233.4
Q ss_pred HHHHHHHhhCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 013238 114 LRELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 192 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 192 (447)
.++++....+.....+||.|.||.||.|.++. ...||||.++.+..+ ..+|+.|..+|+.+.|||+|+++|+|....
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe--veEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh--HHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 36677777778888999999999999999874 678999999876543 457999999999999999999999999999
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..|+|.|||..|+|.++|+...... ++...++.++.||..||.||..+ ++|||||..+|+|+.++..+|++|||+
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~e--v~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSE--VPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhh--cchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccch
Confidence 9999999999999999998865443 77788899999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcc
Q 013238 273 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEK 351 (447)
Q Consensus 273 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (447)
++++............-.+.|.|||.+.-..++.|+|||+|||+|||+.| |..||... ++ .
T Consensus 412 sRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi--------dl----------S 473 (1157)
T KOG4278|consen 412 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DL----------S 473 (1157)
T ss_pred hhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc--------cH----------H
Confidence 99987655544444445778999999999999999999999999999998 98888431 12 2
Q ss_pred ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCchhhHHHHHhhhhh
Q 013238 352 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFR 417 (447)
Q Consensus 352 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~~ 417 (447)
.+..+++...+.+.+..|+..+++||..||+.+|.+||++.|+-+.++..--..+.+...+.+.-.
T Consensus 474 qVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSisdEV~keLgk 539 (1157)
T KOG4278|consen 474 QVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSISDEVQKELGK 539 (1157)
T ss_pred HHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccccccHHHHHHHhh
Confidence 233445555666677788899999999999999999999999999999864444444444444333
No 39
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1e-41 Score=321.80 Aligned_cols=258 Identities=26% Similarity=0.447 Sum_probs=206.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
++|+..+.||+|+||.||+|.... ...||+|.+...........+.+|++.+..++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998643 25799999876544444557889999999999999999999999888899
Q ss_pred EEEecccCCcchhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC
Q 013238 196 LVYPFMVNGSVASCLRERGQS------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 263 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~ 263 (447)
++|||+++++|.+++...... ...+++..++.++.|++.||+|||+. +++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999999998764211 13588999999999999999999999 999999999999999999
Q ss_pred cEEEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHH
Q 013238 264 EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLL 341 (447)
Q Consensus 264 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 341 (447)
.++|+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.... ..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~--------~~ 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS--------NQ 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--------HH
Confidence 999999999976533221 12223346788999999988899999999999999999998 999985311 11
Q ss_pred HHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 342 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
+..... .. ......+...+..+.+++.+||+.||.+|||+.+|++.|+.
T Consensus 234 ~~~~~i-~~---------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 EVIEMI-RS---------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHH-Hc---------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111111 11 11112233456779999999999999999999999999975
No 40
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.8e-42 Score=322.72 Aligned_cols=249 Identities=29% Similarity=0.510 Sum_probs=194.7
Q ss_pred CCeeeecCCeEEEEEEEC-----CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 127 RNILGRGGFGKVYKGRLT-----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
.+.||.|.||.||+|.+. .+..|+||.++..........+.+|++.+++++||||++++|++......++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999976 257899999976555555678999999999999999999999999888899999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++|+|.++|.... ...+++..+..|+.||+.||+|||++ +++|+||+++||++++++.+||+|||++........
T Consensus 84 ~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc--cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999998862 23489999999999999999999999 999999999999999999999999999987632221
Q ss_pred -ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 282 -HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 282 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
...........|+|||.+.+..++.++||||||+++|||++ |+.||... ...++.........
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--------~~~~~~~~~~~~~~------- 223 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--------DNEEIIEKLKQGQR------- 223 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--------CHHHHHHHHHTTEE-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--------cccccccccccccc-------
Confidence 12222346778999999999889999999999999999999 67887421 22222223222211
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
......+...+.+++..||+.+|.+|||+.++++.|
T Consensus 224 ---~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ---LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111222356688999999999999999999999986
No 41
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-42 Score=334.10 Aligned_cols=243 Identities=27% Similarity=0.374 Sum_probs=201.0
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcc
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTER 194 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 194 (447)
..-++|...++||+|.||+|+++..+ +++.+|||.+++... .+.....+.|-.++...+ ||.+++++..++..++.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34568999999999999999999987 588999999987653 233445777877777665 99999999999999999
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
|+||||+.||++..+.+.. .+++..+..+++.|+.||.|||++ +|||||||.+|||||.+|++||+|||+++
T Consensus 445 ~fvmey~~Ggdm~~~~~~~-----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTD-----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred EEEEEecCCCcEEEEEecc-----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccc
Confidence 9999999999955554432 399999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
..-. ....++..+||+.|||||++.+..|+.+.|+|||||+||||+.|..||...+ + +
T Consensus 517 e~m~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd-----E----------------e 574 (694)
T KOG0694|consen 517 EGMG-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD-----E----------------E 574 (694)
T ss_pred ccCC-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC-----H----------------H
Confidence 6432 3335667899999999999999999999999999999999999999996311 1 1
Q ss_pred cccccccC--CCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 013238 355 QLVDSDME--GNYIEEEVEQLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 355 ~~~d~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 391 (447)
++.|..+. ..++.....+...++.+++..+|++|.-+
T Consensus 575 e~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 EVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11222111 12344556678889999999999999876
No 42
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6e-42 Score=319.48 Aligned_cols=256 Identities=24% Similarity=0.422 Sum_probs=205.8
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
..++|+..++||+|++|.||+|...++..||+|.+..... ....+.+|+.+++.++|+||+++++.+...+..+++||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 4567888999999999999999988888899999865322 24568899999999999999999999998899999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++..... ..+++..++.++.+++.||+|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 82 YMAKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred cCCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999876432 2478899999999999999999999 9999999999999999999999999999865432
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.........++..|+|||++.+..++.++||||||+++|+|+| |+.||.... ...... .......
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-----~~~~~~---~~~~~~~------ 222 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS-----NSDVMS---ALQRGYR------ 222 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC-----HHHHHH---HHHcCCC------
Confidence 2222222335678999999988889999999999999999998 999985311 111111 1111100
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..........+.+++.+||+.+|++|||++++++.|+.
T Consensus 223 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 223 ----MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01111234568899999999999999999999999985
No 43
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=330.79 Aligned_cols=270 Identities=24% Similarity=0.394 Sum_probs=227.6
Q ss_pred CHHHHHHHhhCCCCCCeeeecCCeEEEEEEECC---C--cEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeee
Q 013238 113 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD---G--SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 187 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 187 (447)
+..++++..+..+..++||.|.||.||+|.+.+ | --||||.-+.+...+....|+.|.-++++++||||++++|+
T Consensus 380 ~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv 459 (974)
T KOG4257|consen 380 TVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGV 459 (974)
T ss_pred CCCcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeee
Confidence 344455666667777899999999999998753 2 35899999887777777789999999999999999999999
Q ss_pred eecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEE
Q 013238 188 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 267 (447)
Q Consensus 188 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl 267 (447)
|.+ ...|+|||.++.|.|..+|+.+..+ ++......++.||+.||+|||+. ++|||||..+|||+....-+||
T Consensus 460 ~~e-~P~WivmEL~~~GELr~yLq~nk~s---L~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKL 532 (974)
T KOG4257|consen 460 CVE-QPMWIVMELAPLGELREYLQQNKDS---LPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKL 532 (974)
T ss_pred eec-cceeEEEecccchhHHHHHHhcccc---chHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeee
Confidence 975 5679999999999999999987654 88899999999999999999999 9999999999999999999999
Q ss_pred eecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHH
Q 013238 268 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 268 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
+|||+++.+........+...-...|||||.+.-.+++.+||||.|||.+||+++ |..||...
T Consensus 533 aDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv---------------- 596 (974)
T KOG4257|consen 533 ADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV---------------- 596 (974)
T ss_pred cccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc----------------
Confidence 9999999887766555554455778999999999999999999999999999987 99999531
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCchhh
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERW 407 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 407 (447)
+.......++..-+...++.|+..|+.+|.+||..+|.+||++.++...|+.+..++..
T Consensus 597 --kNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~ 655 (974)
T KOG4257|consen 597 --KNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKI 655 (974)
T ss_pred --cccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhh
Confidence 12222333344444456778889999999999999999999999999999987665544
No 44
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1e-41 Score=316.98 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=202.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
++|+..+.||+|+||.||++...++..+|+|.+.... .....+..|++++++++||||+++++++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 4677888999999999999998888889999886432 22446888999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++|+|.+++..... .+++..++.++.+++.||+|||++ +++|+||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 82 ENGCLLNYLRQRQG---KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred CCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 99999999875432 388999999999999999999999 999999999999999999999999999876533222
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.+........ ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--------~~~~~~~i~~~~~---~~~-- 222 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--------NYEVVEMISRGFR---LYR-- 222 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHCCCC---CCC--
Confidence 22222235668999999988889999999999999999999 899985311 1122222211111 000
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
+......+.+++.+||+.+|.+|||+.++++.|.
T Consensus 223 -----~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 -----PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1112346899999999999999999999999873
No 45
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.2e-42 Score=307.69 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=203.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccch-HHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGG-ELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLV 197 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 197 (447)
+.|+..+.|++|+||.||+|+++ +++.||+|+++.+..... ...-++|+.+|.+++|||||.+.++.... +..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 35666788999999999999986 689999999986543222 33568999999999999999999987643 568999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
||||+. +|..+++... +++...+++.+..|+++|++|||.+ .|+|||||++|+|++..|.+||+|||+|+.+.
T Consensus 156 Me~~Eh-DLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999976 9999998765 4699999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc-
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ- 355 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 355 (447)
.. ....+..+-|.+|.|||.+.+. .|+++.|+||+|||+.||+++++.|.. ..+.+..+.+...+....-..
T Consensus 229 sp-~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G-----~sE~dQl~~If~llGtPte~iw 302 (419)
T KOG0663|consen 229 SP-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG-----KSEIDQLDKIFKLLGTPSEAIW 302 (419)
T ss_pred CC-cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC-----CchHHHHHHHHHHhCCCccccC
Confidence 43 3445667789999999998775 589999999999999999999998853 223333333333332111110
Q ss_pred --cccc------c--------cCCCCcHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 356 --LVDS------D--------MEGNYIEE-EVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 356 --~~d~------~--------~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+... . +...+... ..+.-++++...+..||.+|-|+.+.++
T Consensus 303 pg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 303 PGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0000 0 00011111 2356678899999999999999998764
No 46
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.5e-41 Score=320.64 Aligned_cols=249 Identities=20% Similarity=0.303 Sum_probs=198.2
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
...++|+.+..||+|+||.||+|+-+ +|..+|+|++++... ......+..|-.+|....+++||+++..|++...+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 45679999999999999999999865 699999999986543 223446788899999999999999999999999999
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
|||||++||++..+|...+ .|++..++.++.+++.|+..||.. |++||||||+|+|||..|++||+||||+..
T Consensus 218 LiMEylPGGD~mTLL~~~~----~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD----TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred EEEEecCCccHHHHHHhcC----cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccch
Confidence 9999999999999997654 499999999999999999999999 999999999999999999999999999853
Q ss_pred cCCC----------------------C-C-----c------------------eeeccccccCccccccccCCCCCchhh
Q 013238 276 MDYK----------------------D-T-----H------------------VTTAVRGTIGHIAPEYLSTGKSSEKTD 309 (447)
Q Consensus 276 ~~~~----------------------~-~-----~------------------~~~~~~gt~~y~aPE~~~~~~~~~~sD 309 (447)
+... + . . .....+|||.|||||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 3210 0 0 0 011235999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCC
Q 013238 310 VFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP 389 (447)
Q Consensus 310 vwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 389 (447)
+||||||+||||.|.+||...... .....+..|...+... .......+..++|.+|+. ||.+|.
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~-~T~rkI~nwr~~l~fP--------------~~~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQ-ETYRKIVNWRETLKFP--------------EEVDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhhhccCC--------------CcCcccHHHHHHHHHHhc-CHHHhc
Confidence 999999999999999999642110 0111122332211111 111122567888889888 999998
Q ss_pred C
Q 013238 390 K 390 (447)
Q Consensus 390 t 390 (447)
-
T Consensus 435 G 435 (550)
T KOG0605|consen 435 G 435 (550)
T ss_pred C
Confidence 7
No 47
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.9e-41 Score=325.05 Aligned_cols=200 Identities=26% Similarity=0.374 Sum_probs=175.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|+..+.||+|+||.||++... +|..+|+|.+...........+.+|+++++.++|+||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468899999999999999999976 5889999999765444445578999999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++|+|.+++.... .+++..+..++.+++.||.|||+.. +|+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK----RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999997643 3889999999999999999999862 6999999999999999999999999998755322
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 12234589999999999999999999999999999999999999953
No 48
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-41 Score=335.19 Aligned_cols=263 Identities=22% Similarity=0.361 Sum_probs=206.4
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeec
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMT 190 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 190 (447)
.+..++|.+.++||+|+||.||+|... .+..||||++...........+.+|+++++++. ||||+++++++..
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 445678999999999999999999853 134799999976544444557899999999996 9999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCC-------------------------------------------------------
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQ------------------------------------------------------- 215 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 215 (447)
....++|||||++|+|.+++.....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999998865321
Q ss_pred -------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEE
Q 013238 216 -------------------------------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANIL 258 (447)
Q Consensus 216 -------------------------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nil 258 (447)
....+++..++.++.|++.||+|||+. +++||||||+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 012478888999999999999999999 9999999999999
Q ss_pred ECCCCcEEEeecCCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCC
Q 013238 259 LDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDD 336 (447)
Q Consensus 259 l~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~ 336 (447)
+++++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~---- 345 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV---- 345 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch----
Confidence 999999999999999865332221 1122346778999999999899999999999999999997 9999853110
Q ss_pred cccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 337 DVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..... ...... ............+.+++.+||+.+|++|||+.+|.+.|+.
T Consensus 346 ~~~~~----~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 346 DSTFY----NKIKSG---------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred hHHHH----HHHhcC---------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 00000 111110 0111122345678999999999999999999999999985
No 49
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.8e-41 Score=316.38 Aligned_cols=257 Identities=26% Similarity=0.382 Sum_probs=206.2
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+..++|+..+.||+|++|.||+|...+++.||+|.++.... ....+.+|++++++++|+||+++++++...+..+++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 34567888999999999999999987788899999875432 2456889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+++|.+++.... ...+++..+..++.+++.||.|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 81 ELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred ecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 9999999999997643 23489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
...........+..|+|||++.+..++.++||||||+++|||++ |+.||.... . ...........
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~---~~~~~~~~~~~------ 221 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-----N---AEVLQQVDQGY------ 221 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-----H---HHHHHHHHcCC------
Confidence 22111111223457999999998899999999999999999999 999985311 1 11111111110
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
...........+.+++.+||+.+|.+||++.++++.|+.
T Consensus 222 ----~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 222 ----RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ----CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 001112234678999999999999999999999999985
No 50
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-42 Score=332.69 Aligned_cols=247 Identities=24% Similarity=0.336 Sum_probs=205.2
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
-|..++.||.|+.|.|.+|++. +|+.+|||++.+.. .......+.+|+-+|+.+.|||++++++++.+..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 4677889999999999999865 79999999997652 22234468899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++|.|.+++...+ ++.+.+..+++.||+.|+.|+|.. +|+||||||+|+|||..+++||+|||+|..- .
T Consensus 93 yv~gGELFdylv~kG----~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe--~ 163 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG----PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE--V 163 (786)
T ss_pred ecCCchhHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc--c
Confidence 999999999997765 489999999999999999999999 9999999999999999999999999999763 2
Q ss_pred CCceeeccccccCccccccccCCCC-CchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
........+|++.|.|||++.+.+| ..++||||.|||||.|+||+.||+..+ -..+...|+. +.
T Consensus 164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-----ir~LLlKV~~----G~------ 228 (786)
T KOG0588|consen 164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-----IRVLLLKVQR----GV------ 228 (786)
T ss_pred CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-----HHHHHHHHHc----Cc------
Confidence 3444556689999999999999988 679999999999999999999996321 1111111111 00
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
-+.+.....+..+|+.+|+..||..|.|++||++.
T Consensus 229 ----f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 229 ----FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ----ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 01123334567889999999999999999999984
No 51
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.7e-41 Score=315.13 Aligned_cols=257 Identities=28% Similarity=0.432 Sum_probs=206.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
.++|+..+.||+|+||.||+|.... ...||||.++..........+.+|+.+++.++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 4578889999999999999998752 457999998765555555678899999999999999999999998889999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+|||+++++|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||++...
T Consensus 83 v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG---KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEcCCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999876432 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 277 DYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 277 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
....... .....++..|+|||.+.+..++.++||||||+++|||++ |..||... . .............
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~-----~---~~~~~~~~~~~~~-- 226 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM-----S---NQDVIKAVEDGYR-- 226 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC-----C---HHHHHHHHHcCCC--
Confidence 4222221 112234678999999998899999999999999999998 99998421 1 1111111111100
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..........+.+++.+||+.+|++||++.+|++.|+..
T Consensus 227 --------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 227 --------LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011122345689999999999999999999999999864
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.3e-41 Score=317.37 Aligned_cols=251 Identities=27% Similarity=0.381 Sum_probs=198.4
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
|+..+.||+|+||.||++... +|+.||+|.+...... .....+.+|++++..++|+|++++.+++.+.+..+++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 667789999999999999864 6899999998654322 2234577899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++|+|..++..... ..+++..++.++.|++.||+|||+. +++||||||+|||+++++.++|+|||++......
T Consensus 82 ~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05631 82 MNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG- 155 (285)
T ss_pred cCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-
Confidence 999999988765332 2489999999999999999999999 9999999999999999999999999999865322
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||..... . .....+.......
T Consensus 156 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~----~-~~~~~~~~~~~~~--------- 220 (285)
T cd05631 156 -ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE----R-VKREEVDRRVKED--------- 220 (285)
T ss_pred -CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCc----c-hhHHHHHHHhhcc---------
Confidence 222344689999999999999999999999999999999999999963211 1 0111111111000
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 396 (447)
...........+.+++.+||+.||.+||+ ++++++
T Consensus 221 -~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 -QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred -cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 01112223456889999999999999997 677775
No 53
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.1e-41 Score=318.73 Aligned_cols=261 Identities=25% Similarity=0.409 Sum_probs=204.3
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 192 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 192 (447)
+..++|+..+.||+|+||.||+|... .+..||||.+...........+.+|+.+++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45678999999999999999999753 246799999865433334456889999999999999999999999888
Q ss_pred cceEEEecccCCcchhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQS------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
..++||||+++++|.+++...... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 999999999999999998764321 22467889999999999999999999 999999999999999999999
Q ss_pred EeecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHH
Q 013238 267 VGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 267 l~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 344 (447)
|+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||.... .....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~--------~~~~~ 231 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS--------NEQVL 231 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHH
Confidence 99999987543322211 111235678999999998899999999999999999999 788885311 11111
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
....... .. .........+.+++.+||+.+|++|||+.++++.|++
T Consensus 232 ~~~~~~~-~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 232 RFVMEGG-LL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHcCC-cC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111110 00 0111234568999999999999999999999999863
No 54
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.1e-41 Score=316.96 Aligned_cols=262 Identities=24% Similarity=0.333 Sum_probs=198.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||+|+||.||+|... +++.||+|.++..........+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999876 68899999997554433444678899999999999999999999988889999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. |+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LD-SDLKQYLDNCG---NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CC-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 96 48988886543 2378899999999999999999999 99999999999999999999999999997643222
Q ss_pred CceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh----------
Q 013238 281 THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK---------- 349 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 349 (447)
. ......++..|+|||++.+ ..++.++|||||||++|||+||+.||..... ............
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV-----KEELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred c-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChHHhhcc
Confidence 2 1223457899999998865 5689999999999999999999999953211 011111111000
Q ss_pred --ccccccccccccCCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 --EKKLEQLVDSDMEGNY----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 --~~~~~~~~d~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.........+...... .........+++.+||+.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 232 TSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000011111100000 0112345789999999999999999999975
No 55
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.5e-41 Score=318.60 Aligned_cols=259 Identities=26% Similarity=0.456 Sum_probs=206.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcc
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 194 (447)
.++|.+.+.||+|+||.||+|...+ +..||||.++..........+.+|+++++.++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3467778899999999999998642 4789999997655444456789999999999999999999999999999
Q ss_pred eEEEecccCCcchhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc
Q 013238 195 LLVYPFMVNGSVASCLRERGQ----------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 264 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~ 264 (447)
+++|||+++++|.+++...+. ....+++..+..++.+++.||.|||++ +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 999999999999999976432 223478999999999999999999999 9999999999999999999
Q ss_pred EEEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHH
Q 013238 265 AVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 342 (447)
Q Consensus 265 ~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 342 (447)
++|+|||++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... . .+
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~-----~---~~ 232 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS-----N---EE 232 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-----H---HH
Confidence 99999999875432221 11122335678999999999999999999999999999998 999985311 1 11
Q ss_pred HHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 343 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.+.... .... ..........+.+++.+||+.||.+|||+.||++.|++
T Consensus 233 ~~~~~~-~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 233 VIECIT-QGRL---------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHH-cCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111111 1110 11112234668999999999999999999999999863
No 56
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-42 Score=296.58 Aligned_cols=265 Identities=25% Similarity=0.316 Sum_probs=211.8
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEE-ECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC-----C
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----T 192 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 192 (447)
+..++|++.+.||+|+|+-||+++ ..++..+|+|++.... .......++|++..++++|||++++++++... .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 456789999999999999999998 4578999999998765 34455678999999999999999999887543 3
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
+.|++++|...|+|.+.++.....+..+++.+++.|+.+|++||++||+. .+.+.||||||.|||+.+.+.++|.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 48999999999999999998877777799999999999999999999998 23499999999999999999999999999
Q ss_pred ccccCCCCCc--------eeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHH
Q 013238 273 AKLMDYKDTH--------VTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 341 (447)
Q Consensus 273 ~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 341 (447)
+....-.... .......|..|.|||.+. +...++++|||||||+||+|+.|..||+..... +.
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~-Gg----- 249 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ-GG----- 249 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-CC-----
Confidence 8754321111 112234688999999885 445689999999999999999999999743221 10
Q ss_pred HHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 342 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.-.-.+....+.........+.+.+++.+|++.||.+||++.+++..++.
T Consensus 250 ---------SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 250 ---------SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred ---------eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 11111222222222233367889999999999999999999999998875
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.2e-41 Score=318.91 Aligned_cols=264 Identities=23% Similarity=0.342 Sum_probs=197.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|+..+.||+|+||.||+|... +++.||||.+...........+.+|+++++.++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367899999999999999999976 6889999999755433334467789999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+. ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++......
T Consensus 84 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKHP---GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 995 67877776543 2388899999999999999999999 9999999999999999999999999998754322
Q ss_pred CCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc-----
Q 013238 280 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL----- 353 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 353 (447)
. .......++..|+|||++.+ ..++.++|||||||++|||++|+.||.... ........+.........
T Consensus 157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 157 S-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK----DIQDQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred C-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc----cHHHHHHHHHHHhCCCChhhccc
Confidence 2 12233457899999999865 457899999999999999999999996321 111111111111000000
Q ss_pred ----ccccccccC---CCCcH------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 354 ----EQLVDSDME---GNYIE------EEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 354 ----~~~~d~~~~---~~~~~------~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
......... ..... .....+.+++.+||+.||.+|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000 00000 01245778999999999999999999885
No 58
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.5e-41 Score=324.43 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=202.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCc----EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
..+|+..+.||+|+||.||+|.+. ++. .||+|.++..........+.+|+.+++.++|+||++++|+|... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 346888999999999999999864 333 48999987554444456788999999999999999999998764 578
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
++++|+++|+|.+++.... ..+++..++.++.||+.||+|||++ +++||||||+|||+++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 9999999999999987643 2378999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcee-eccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 276 MDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 276 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
......... ....++..|+|||++.+..++.++||||||+++|||++ |+.||+... ..++.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~--------~~~~~~~~~~~--- 227 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--------ASEISSILEKG--- 227 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHhCC---
Confidence 653332211 11224668999999999999999999999999999998 999985311 11111111111
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
........+...+.+++.+||+.+|.+|||+.+++..|....
T Consensus 228 -------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 228 -------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000111123356889999999999999999999999988754
No 59
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.6e-41 Score=328.23 Aligned_cols=263 Identities=29% Similarity=0.441 Sum_probs=204.2
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeec
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 190 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 190 (447)
++..++|++.+.||+|+||.||+|... +++.||+|+++..........+..|++++.++ +|+||++++++|..
T Consensus 3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 445678999999999999999999642 25789999997554433445678899999999 89999999998875
Q ss_pred C-CcceEEEecccCCcchhhhhhcCCC-----------------------------------------------------
Q 013238 191 P-TERLLVYPFMVNGSVASCLRERGQS----------------------------------------------------- 216 (447)
Q Consensus 191 ~-~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------------- 216 (447)
. ...+++|||+++++|.+++......
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4 4678999999999999988643210
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce-eecccccc
Q 013238 217 ----QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTI 291 (447)
Q Consensus 217 ----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~ 291 (447)
..++++..+..++.||+.||+|||++ +|+||||||+|||+++++.++|+|||++..+....... .....++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 12589999999999999999999999 99999999999999999999999999998654322211 22234567
Q ss_pred CccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHH
Q 013238 292 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEV 370 (447)
Q Consensus 292 ~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 370 (447)
.|+|||++.+..++.++|||||||++|||++ |..||.... ....+ ... ..... ....+....
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~----~~~~~---~~~-~~~~~---------~~~~~~~~~ 302 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ----IDEEF---CRR-LKEGT---------RMRAPEYAT 302 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC----ccHHH---HHH-HhccC---------CCCCCccCC
Confidence 8999999999999999999999999999998 999985311 00011 111 11110 011112234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 371 EQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 371 ~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..+.+++.+||+.+|.+||++.++++.|++
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 568999999999999999999999999986
No 60
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.6e-41 Score=317.49 Aligned_cols=268 Identities=18% Similarity=0.241 Sum_probs=200.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|++.+.||+|+||.||++... +++.||+|++..... ......+.+|+++++.++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999986 578999999875432 2234467889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|++++.+..+.... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 99987766544322 2488999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCC-------CcccHHHHHHHHhhccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-------DDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 352 (447)
.........|+..|+|||++.+..++.++|||||||++|||++|+.||........ .................
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 33233344589999999999988899999999999999999999999953211000 00000000011111111
Q ss_pred cccccccccCC------CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEG------NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
......+.... .........+.+++.+||+.||.+|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11100000000 001123456899999999999999999999875
No 61
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.5e-41 Score=315.72 Aligned_cols=255 Identities=29% Similarity=0.412 Sum_probs=203.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
..+|...+.||+|++|.||+|... .++.||+|.+.... .....+.+|+++++.++|+||+++++++......+++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 345777889999999999999875 48899999986432 224468889999999999999999999999899999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++..... ..+++..++.++.|+++||+|||++ +++||||||+||++++++.+||+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 83 FMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred eCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999999865432 3489999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.........++..|+|||.+.+..++.++||||||+++|||++ |..||... ...+........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~--------~~~~~~~~~~~~-------- 221 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQVYELLEKG-------- 221 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------CHHHHHHHHHCC--------
Confidence 2221122224567999999998899999999999999999998 89998531 111111111111
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.........+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 222 --~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 222 --YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 1111122234668999999999999999999999999985
No 62
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=316.99 Aligned_cols=258 Identities=25% Similarity=0.333 Sum_probs=201.8
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-------------chHHHHHHHHHHHHhcCCCceeeE
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-------------GGELQFQTEVEMISMAVHRNLLRL 184 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l 184 (447)
..-+.|++.+.||+|.||.|-+|... +++.||||++.+.... .......+|+.+|+++.|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34468999999999999999999876 6899999999653211 112367899999999999999999
Q ss_pred eeeeecC--CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC
Q 013238 185 RGFCMTP--TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE 262 (447)
Q Consensus 185 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~ 262 (447)
+++..++ +..|||+|||..|.+...=. ..+.+++.++++++.+++.||.|||.+ +|+||||||+|+||+++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~----d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP----DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCC----CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 9998765 57899999999887654321 122289999999999999999999999 99999999999999999
Q ss_pred CcEEEeecCCccccCCCC----CceeeccccccCccccccccCCC----CCchhhhHHHHHHHHHHHhCCCCcccccccC
Q 013238 263 FEAVVGDFGLAKLMDYKD----THVTTAVRGTIGHIAPEYLSTGK----SSEKTDVFGYGVMLLELITGQRAFDLARLAN 334 (447)
Q Consensus 263 ~~~kl~Dfgl~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~il~elltg~~p~~~~~~~~ 334 (447)
|++||+|||.+....... ........||+.|+|||.+.++. .+.+.||||+||+||.|+.|+.||-...
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~--- 323 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF--- 323 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch---
Confidence 999999999998653221 11223357999999999987743 3678899999999999999999994211
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.. . ....++...+......+..+.+.+|+.++|.+||+.|.+..+|......
T Consensus 324 -----~~----~-----l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 324 -----EL----E-----LFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred -----HH----H-----HHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 11 1 1122333333333333556778999999999999999999999877654
No 63
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-42 Score=326.53 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=211.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCceeeEeeeeecCCc-ceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTE-RLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 198 (447)
++|...+++|+|+||.++.++.+ ++..+++|.+....... .+.....|+.+++++.|||||.+.+.+...+. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888899999999999999876 57899999997655332 33467889999999999999999999998887 89999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
+||+||+|.+.+...++ .-+++..++.++.|++.|+.|||++ +|+|||||+.|||++.++.++|+|||+|+.+..
T Consensus 84 ~Y~eGg~l~~~i~~~k~--~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKG--VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999987653 3489999999999999999999998 999999999999999999999999999999876
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
... ......||+.||.||.+.+.+|..|+|||||||++|||++-+++|+..++ ...+-..... .
T Consensus 159 ~~~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~-----~-- 222 (426)
T KOG0589|consen 159 EDS-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRG-----L-- 222 (426)
T ss_pred chh-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhc-----c--
Confidence 543 33446699999999999999999999999999999999999999975322 1111111111 1
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
....+......+..++..|++.+|..||++.+++..
T Consensus 223 ---~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 ---YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 122344456778999999999999999999999986
No 64
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.5e-41 Score=312.77 Aligned_cols=252 Identities=26% Similarity=0.413 Sum_probs=201.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
++|+..+.||+|++|.||+|...++..+|+|.+..... ....+.+|+.++.+++||||+++++++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 46778889999999999999987777799999865332 2346889999999999999999999998888899999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+|+|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~l~~~i~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 82 SNGCLLNYLREHGK---RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred CCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 99999999876432 489999999999999999999999 999999999999999999999999999876543222
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+...........
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~------- 220 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--------NSETVEKVSQGLRL------- 220 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHHhcCCCC-------
Confidence 22222235678999999988889999999999999999998 999985311 11111111111100
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
.........+.+++.+||+.+|.+|||+.+++..|+
T Consensus 221 ---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 ---YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 011112467899999999999999999999998874
No 65
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8.8e-41 Score=312.65 Aligned_cols=262 Identities=20% Similarity=0.313 Sum_probs=209.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|++.+.||+|+||.||+|... +++.||||.+.... .......+.+|+++++.++|||++++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47888999999999999999875 68999999886432 2233446888999999999999999999999889999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.........+++..++.++.+++.||+|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998875443344588999999999999999999999 999999999999999999999999999886543
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.... .....++..|+|||.+.+..++.++|+||||+++|||++|+.||... ......+.......
T Consensus 159 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~------~~~~~~~~~~~~~~-------- 223 (267)
T cd08228 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLFSLCQKIEQC-------- 223 (267)
T ss_pred hhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc------cccHHHHHHHHhcC--------
Confidence 2211 12235788999999998888999999999999999999999998531 11112222111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
.............+.+++.+||+.+|.+|||+.++++.|++..
T Consensus 224 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 224 -DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0111112234567899999999999999999999999998754
No 66
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.6e-41 Score=328.21 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=193.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||+|+||.||+|... +++.||||.+...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34556788999999999999876 68999999996654444455788999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+|+|.... ...+..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 154 ~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 154 MDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 9999986532 256778889999999999999999 99999999999999999999999999998654322
Q ss_pred CceeeccccccCccccccccC-----CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
. ......|+..|+|||++.. ...+.++|||||||++|||++|+.||..... ..............
T Consensus 223 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~---- 292 (353)
T PLN00034 223 D-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-----GDWASLMCAICMSQ---- 292 (353)
T ss_pred c-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhccC----
Confidence 1 1233468999999998743 2345689999999999999999999962111 11111111110000
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
...........+.+++.+||+.||++|||+.|+++.
T Consensus 293 ------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 ------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011122334568999999999999999999999873
No 67
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.7e-41 Score=322.75 Aligned_cols=242 Identities=23% Similarity=0.288 Sum_probs=194.4
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+.||+|+||.||++... +|+.||+|+++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999875 689999999975432 222345778999999999999999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 284 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 284 (447)
+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~ 152 (323)
T cd05571 81 ELFFHLSRER----VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATM 152 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcc
Confidence 9999887543 488999999999999999999999 9999999999999999999999999998753222 1222
Q ss_pred eccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCC
Q 013238 285 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGN 364 (447)
Q Consensus 285 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 364 (447)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........... +. .
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~~~~~-------~~----~ 213 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILME-------EI----R 213 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC--------HHHHHHHHHcC-------CC----C
Confidence 33468999999999999999999999999999999999999995311 11111111110 00 1
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 365 YIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 365 ~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
.+......+.+++.+||+.||.+|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1122345688999999999999999 7888875
No 68
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-40 Score=321.38 Aligned_cols=201 Identities=25% Similarity=0.385 Sum_probs=175.3
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
..++|+..++||+|+||.||++... ++..+|+|.+...........+.+|+++++.++|+||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3578999999999999999999976 588899998876544444557889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+|+|.+++.... .+++..+..++.+++.||.|||+.. +++|+||||+|||+++++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 83 EHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 9999999999997543 3788999999999999999999742 699999999999999999999999999875432
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred h---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2 12234588999999999988899999999999999999999999964
No 69
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=9.5e-41 Score=309.74 Aligned_cols=248 Identities=27% Similarity=0.419 Sum_probs=196.6
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
+.||+|+||.||+|... +++.+|+|.+...........+.+|+++++.++|+||+++++++......++||||+.+++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999875 68899999886554444455788999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee-e
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-T 285 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~-~ 285 (447)
.+++.... ..+++..++.++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++........... .
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRTEG---PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 99986532 2488999999999999999999999 999999999999999999999999999875432111110 1
Q ss_pred ccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCC
Q 013238 286 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGN 364 (447)
Q Consensus 286 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 364 (447)
....+..|+|||.+.+..++.++||||||+++|||++ |..||..... ......... .....
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--------~~~~~~~~~----------~~~~~ 216 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--------QQTREAIEQ----------GVRLP 216 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--------HHHHHHHHc----------CCCCC
Confidence 1123456999999998899999999999999999998 8888853110 011111100 01111
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 365 YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 365 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
........+.+++.+||+.+|++|||+.+|++.|+
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 12233457899999999999999999999999986
No 70
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.8e-41 Score=315.87 Aligned_cols=266 Identities=27% Similarity=0.370 Sum_probs=200.7
Q ss_pred CCCCeeeecCCeEEEEEEE-----CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceEE
Q 013238 125 SNRNILGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLV 197 (447)
Q Consensus 125 ~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 197 (447)
...+.||+|+||+||++.+ .+++.||+|.++..........+.+|+++++.++||||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7788999999999988753 257789999997654433455788999999999999999999988654 357899
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||+.+++|.+++... .+++..++.++.|++.||.|||++ +++||||||+|||+++++.++|+|||++....
T Consensus 87 ~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999998653 289999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCc--eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 278 YKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 278 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
..... ......++..|+|||.+.+..++.++||||||+++|||+||+.|+...... ..................+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK---FEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch---hhhhhcccccccchhhhhh
Confidence 32211 111223566799999998888999999999999999999999998532100 0000000000000011111
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..+..............+.+++.+||+.+|++|||++++++.|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 1111111112223456799999999999999999999999999864
No 71
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.5e-41 Score=315.28 Aligned_cols=256 Identities=27% Similarity=0.420 Sum_probs=207.3
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
...+|+..++||.|+||.||+|...++..+++|.+..... .....+..|+.+++.++|+||+++++++......+++||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 4567888899999999999999988889999999875433 223468889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++..... ..+++..++.++.+++.||.|||++ +++|+||+|+||++++++.+||+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 83 LMEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred ecccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 9999999999976432 3489999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
... .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ..+........
T Consensus 158 ~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~-------- 220 (261)
T cd05148 158 VYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--------NHEVYDQITAG-------- 220 (261)
T ss_pred ccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHHhC--------
Confidence 211 123335678999999988899999999999999999998 899995321 11111111111
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
............+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 221 --~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 221 --YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 1111122334668899999999999999999999999985
No 72
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.8e-41 Score=323.76 Aligned_cols=254 Identities=20% Similarity=0.250 Sum_probs=202.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|++.+.||+|+||.||+|... +++.||||++...... .....+..|++++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888899999999999999976 5889999999754321 23346788999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... .+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG----VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 9999999999997543 388999999999999999999999 999999999999999999999999999975432
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
......|++.|+|||++.+..++.++|||||||++|||++|..||.... ..+......... ....
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~---~~~~ 218 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST--------PNETWENLKYWK---ETLQ 218 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC--------HHHHHHHHHhcc---cccc
Confidence 2233458999999999999999999999999999999999999995321 111111111100 0011
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
..............+.+++.+||+.+|.+|||+.++++.
T Consensus 219 ~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000000011234568899999999999999999999875
No 73
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.2e-41 Score=311.70 Aligned_cols=255 Identities=26% Similarity=0.413 Sum_probs=203.7
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
..++|++.+.||+|++|.||+|...++..+|+|.+..... ....+.+|+.++++++|+|++++++++. ....+++||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 4567888999999999999999988888899999875433 2346889999999999999999999874 456899999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+.+++|.+++.... ...+++..++.++.+++.||+|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 81 YMSKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred ecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 999999999987542 23489999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.........++..|+|||.+.+..++.++||||||+++|||++ |..||.... ..+........
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~-------- 219 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--------NREVLEQVERG-------- 219 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHcC--------
Confidence 2222222235668999999988889999999999999999999 888985311 11111111111
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
............+.+++.+||+.+|.+|||+.++++.|++
T Consensus 220 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 220 --YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111122334569999999999999999999999999975
No 74
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=325.80 Aligned_cols=245 Identities=23% Similarity=0.310 Sum_probs=197.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+++++.++||||+++++++...+..+++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888899999999999999976 588999999965421 122346788999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG----RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999999987643 378899999999999999999999 999999999999999999999999999986533
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.. ....|++.|+|||++.+..++.++|||||||++|||++|+.||.... ...........
T Consensus 171 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~-------- 230 (329)
T PTZ00263 171 RT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT--------PFRIYEKILAG-------- 230 (329)
T ss_pred Cc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC--------HHHHHHHHhcC--------
Confidence 21 23458999999999999999999999999999999999999995311 11111111111
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 396 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 396 (447)
.. ..+......+.+++.+||+.||.+||+ +.+++.
T Consensus 231 -~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 231 -RL--KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred -Cc--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 00 011112345789999999999999997 455554
No 75
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8e-41 Score=311.07 Aligned_cols=251 Identities=24% Similarity=0.395 Sum_probs=200.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
.+|+..+.||+|+||.||++...++..+|+|.+..... ....+.+|+++++.++|+||+++++++...+..+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 35778889999999999999987777899999864322 2346788999999999999999999999888999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++++|.+++..... .+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 82 ANGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 99999999876432 489999999999999999999999 999999999999999999999999999876532221
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||.... . .+........
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~---~~~~~~~~~~---------- 217 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS-----N---SEVVESVSAG---------- 217 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC-----H---HHHHHHHHcC----------
Confidence 11111223457999999998899999999999999999999 899985311 0 1111111111
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
............+.+++.+||+.+|++|||+.++++.|
T Consensus 218 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 00111122455799999999999999999999999987
No 76
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.6e-41 Score=319.76 Aligned_cols=264 Identities=28% Similarity=0.427 Sum_probs=208.0
Q ss_pred HHHHhhCCCCCCeeeecCCeEEEEEEECC------CcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeee
Q 013238 117 LQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 189 (447)
Q Consensus 117 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 189 (447)
+.+..++|+..+.||+|+||.||++...+ ...+|+|.+...........+.+|++++.++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 34556788889999999999999998642 3679999987654444445688899999999 7999999999999
Q ss_pred cCCcceEEEecccCCcchhhhhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCE
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERG------------QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANI 257 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Ni 257 (447)
.....+++|||+++|+|..+++... .....+++..++.++.|++.||+|||+. +++||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeE
Confidence 9899999999999999999987532 2234589999999999999999999999 999999999999
Q ss_pred EECCCCcEEEeecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCC
Q 013238 258 LLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAND 335 (447)
Q Consensus 258 ll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~ 335 (447)
++++++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---- 239 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP---- 239 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC----
Confidence 99999999999999998654322111 112234568999999988899999999999999999997 988884211
Q ss_pred CcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 336 DDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..+........ .....+......+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 240 ----~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 240 ----VEELFKLLKEG----------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred ----HHHHHHHHHcC----------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 11111111111 11111223345688999999999999999999999999864
No 77
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.4e-40 Score=308.13 Aligned_cols=248 Identities=30% Similarity=0.439 Sum_probs=198.9
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcch
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA 207 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 207 (447)
++||+|+||.||+|...++..+|+|.+...........+.+|+++++.++|+||+++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988889999999876554444556889999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeecc
Q 013238 208 SCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 287 (447)
Q Consensus 208 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 287 (447)
+++.... ..+++..+..++.+++.||.|||++ +++|+||+|+||++++++.+||+|||++..............
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRKKK---DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 9886543 2378999999999999999999999 999999999999999999999999999875432222111222
Q ss_pred ccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 288 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 288 ~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
.++..|+|||++.+..++.++||||||+++|++++ |..||.... ............ .....
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~--------~~~~~~~~~~~~----------~~~~~ 216 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT--------NQQAREQVEKGY----------RMSCP 216 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHHHcCC----------CCCCC
Confidence 34567999999998899999999999999999998 999985311 111111111110 01111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
......+.+++.+||+.+|++|||+.++++.|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 223467899999999999999999999999875
No 78
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-42 Score=293.49 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=207.1
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
+-++|++++.||+|.||.||.|+.+ ++-.||+|++.+... .....++.+|+++-+.++||||+++++++.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 3468899999999999999999865 578999999975432 2234578899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
++||..+|+|...|...... .+++.....++.|+|.||.|+|.. +|+||||||+|+|++..+.+||+|||.+..-
T Consensus 100 ilEya~~gel~k~L~~~~~~--~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMK--RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEEecCCchHHHHHHhcccc--cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999999999854432 488889999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
. .......+||..|.+||...+..++...|+|++|++.||++.|..||+... .. ..+..-...++
T Consensus 175 p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--------~~----etYkrI~k~~~ 239 (281)
T KOG0580|consen 175 P---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--------HS----ETYKRIRKVDL 239 (281)
T ss_pred C---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--------hH----HHHHHHHHccc
Confidence 3 333455679999999999999999999999999999999999999996321 11 11111111111
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. .+........++|.+|+..+|.+|.+..|++..
T Consensus 240 ~-------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 240 K-------FPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred c-------CCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1 123334557889999999999999999998764
No 79
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2e-40 Score=317.50 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=195.9
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
||+|+||.||++... +++.||+|.+.... .......+.+|++++..++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999976 57899999986532 222334677899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeec
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 286 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 286 (447)
.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 152 (312)
T cd05585 81 FHHLQREG----RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT 152 (312)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence 99987543 388999999999999999999999 99999999999999999999999999987543222 22234
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
..||+.|+|||++.+..++.++|||||||++|||++|+.||... ............. ...+
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~--------~~~~~~~~~~~~~-----------~~~~ 213 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE--------NVNEMYRKILQEP-----------LRFP 213 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC--------CHHHHHHHHHcCC-----------CCCC
Confidence 56899999999999999999999999999999999999999531 1112222221110 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 403 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 403 (447)
......+.+++.+||+.||.+||++..+.+.|.-.-+
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~ 250 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFF 250 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCc
Confidence 2234568899999999999999876555555554333
No 80
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=7.6e-41 Score=315.41 Aligned_cols=262 Identities=25% Similarity=0.379 Sum_probs=208.6
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECC-----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeec-CC
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTD-----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-PT 192 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 192 (447)
+..++|...+.||+|+||.||+|...+ +..|++|++...........+.+|+.+++.++|+|++++++++.. ..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 456788899999999999999999765 688999998765444445678899999999999999999998876 46
Q ss_pred cceEEEecccCCcchhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEe
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQS----QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 268 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 268 (447)
..+++++|+.+++|.+++...... ...+++..++.++.+++.||+|||+. +++|+||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999998764322 14589999999999999999999999 99999999999999999999999
Q ss_pred ecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHH
Q 013238 269 DFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 269 Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
|||+++.+....... .....++..|+|||++.+..++.++||||||+++||+++ |+.||.... ..++...
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~ 231 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--------PFEMAAY 231 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--------HHHHHHH
Confidence 999998654332221 122335678999999988889999999999999999999 999995311 1111111
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...... ......+...+.+++.+||+.+|++|||+.++++.|+..
T Consensus 232 ~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 232 LKDGYR----------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred HHcCCC----------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111111 011122345689999999999999999999999999864
No 81
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-40 Score=311.16 Aligned_cols=255 Identities=27% Similarity=0.397 Sum_probs=203.1
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
..++|++.++||+|+||.||+|.+.++..||+|.+..... ....+.+|+++++.++|+||+++++++. ....+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 80 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence 3467899999999999999999987767899999975332 2346889999999999999999999864 456799999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+.+|+|.+++.... ...+++..++.++.+++.||+|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 81 YMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred cCCCCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 999999999997542 22478999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.........++..|+|||+..+..++.++||||||+++|||+| |..||.... . ..........
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-----~---~~~~~~~~~~-------- 219 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----N---REVLDQVERG-------- 219 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----h---HHHHHHHhcC--------
Confidence 3222222345678999999988899999999999999999999 888885311 0 0111111100
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
............+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 220 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 220 --YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred --CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 0111123345678999999999999999999999999985
No 82
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.1e-40 Score=310.71 Aligned_cols=256 Identities=27% Similarity=0.438 Sum_probs=205.1
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+..++|+..++||+|+||.||+|...+++.||+|.+..... ....+.+|+++++.++|+|++++++++ ..+..+++|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~ 79 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIIT 79 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEE
Confidence 44678899999999999999999988889999999875432 234688999999999999999999986 456789999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+++|.+++..... ..+++..+..++.+++.||+|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 80 e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 80 EYMENGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EcCCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 99999999999865432 3488999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
..........++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.+........
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~----- 221 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--------NPEVIQNLERGYR----- 221 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--------hHHHHHHHHcCCC-----
Confidence 22222223345678999999988889999999999999999999 999995311 1111111111100
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..........+.+++.+||+.+|++|||++++++.|+.
T Consensus 222 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 -----MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01111234569999999999999999999999999975
No 83
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.2e-40 Score=308.67 Aligned_cols=261 Identities=21% Similarity=0.330 Sum_probs=210.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|++|.||+|... +|+.||+|.++... .......+.+|++++++++|+|++++++++...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999987 78999999886432 2223456889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|..++.........+++..++.++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999876544445689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ....+........ .
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~------ 224 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIEKC-D------ 224 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC------ccHHHHHhhhhcC-C------
Confidence 3222 222347889999999988889999999999999999999999985321 1122221111110 0
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
............+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 225 --~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 225 --YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred --CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 00111123456788999999999999999999999999864
No 84
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=337.25 Aligned_cols=266 Identities=22% Similarity=0.277 Sum_probs=215.8
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCC-cEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeee-eec-----
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDG-SLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGF-CMT----- 190 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~~----- 190 (447)
+...++++.+.|.+|||+.||+|.+..+ ..||+|++-.. .+.....+.+|+++|++|. |+|||.+++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 4455778889999999999999998765 99999999766 4555667899999999998 9999999993 221
Q ss_pred -CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEee
Q 013238 191 -PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 269 (447)
Q Consensus 191 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 269 (447)
.-+.+|.||||.+|.|-++++.+.... |++.++++|+.++++|+++||.. .+.|||||||.+||||+.+++.||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~--lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTR--LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 135689999999999999999875544 99999999999999999999996 66799999999999999999999999
Q ss_pred cCCccccCCCCCce--------eeccccccCccccccc---cCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcc
Q 013238 270 FGLAKLMDYKDTHV--------TTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 338 (447)
Q Consensus 270 fgl~~~~~~~~~~~--------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~ 338 (447)
||.+.......... .-...-|+.|+|||.+ .+...++|+|||+|||+||-||....||+..
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s-------- 261 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES-------- 261 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC--------
Confidence 99986432221110 0012358899999976 5778899999999999999999999999632
Q ss_pred cHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCchhhHH
Q 013238 339 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEE 409 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~ 409 (447)
-...+++....-...+.+...|.+||..||+.||.+||++.+|+..+-.+.-.+++-.
T Consensus 262 -------------g~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~ 319 (738)
T KOG1989|consen 262 -------------GKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP 319 (738)
T ss_pred -------------cceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence 1234455444444446788899999999999999999999999998887665555443
No 85
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-40 Score=328.03 Aligned_cols=265 Identities=21% Similarity=0.336 Sum_probs=206.4
Q ss_pred HHHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeee
Q 013238 117 LQVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCM 189 (447)
Q Consensus 117 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 189 (447)
+++..++|.+.+.||+|+||.||+|++. .+..||+|+++..........+..|++++.++. |+||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3455667888899999999999999853 246899999976544444456889999999997 999999999999
Q ss_pred cCCcceEEEecccCCcchhhhhhcCC------------------------------------------------------
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERGQ------------------------------------------------------ 215 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 215 (447)
.....++||||+.+|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 98899999999999999999875321
Q ss_pred ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCC
Q 013238 216 ----------------------------------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAA 255 (447)
Q Consensus 216 ----------------------------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~ 255 (447)
....+++..+..++.|++.||+|||+. +++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 113467888899999999999999998 9999999999
Q ss_pred CEEECCCCcEEEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCccccccc
Q 013238 256 NILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLA 333 (447)
Q Consensus 256 Nill~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~ 333 (447)
|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~- 347 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM- 347 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc-
Confidence 99999999999999999976432211 11122346788999999998889999999999999999998 8889853110
Q ss_pred CCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 334 NDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.+......... .....+......+.+++.+||+.+|.+||++++|++.|++.
T Consensus 348 -------~~~~~~~~~~~---------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 348 -------NEQFYNAIKRG---------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred -------hHHHHHHHHcC---------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 01111111111 01111122345689999999999999999999999999863
No 86
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-40 Score=313.80 Aligned_cols=258 Identities=25% Similarity=0.421 Sum_probs=202.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEE-----CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
++|+..+.||+|+||.||+|.. ..+..+++|.+...........+.+|+++++.++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4677788999999999999974 24678999999765444444578899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC
Q 013238 197 VYPFMVNGSVASCLRERGQ-------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 263 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~ 263 (447)
+|||+.+++|.+++..... ....+++..+..++.+++.||+|||++ +++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999854321 123478899999999999999999999 999999999999999999
Q ss_pred cEEEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHH
Q 013238 264 EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLL 341 (447)
Q Consensus 264 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 341 (447)
.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||.... ..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--------~~ 233 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--------NQ 233 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HH
Confidence 999999999976533221 11222335678999999988889999999999999999998 988984211 01
Q ss_pred HHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 342 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
...... ...... .........+.+++.+||+.+|.+||++.++++.|..
T Consensus 234 ~~~~~~-~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 EVIEMV-RKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHH-HcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111 111100 1111234568899999999999999999999999864
No 87
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.1e-41 Score=314.26 Aligned_cols=261 Identities=27% Similarity=0.420 Sum_probs=206.3
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECC------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 192 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 192 (447)
+..++|+..+.||+|+||.||+|...+ +..||+|.+...........+.+|+.+++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 345678889999999999999998642 36899999875544444557889999999999999999999999999
Q ss_pred cceEEEecccCCcchhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQS------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
..+++|||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 999999999999999998764321 22478899999999999999999999 999999999999999999999
Q ss_pred EeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHH
Q 013238 267 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 267 l~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 344 (447)
|+|||+++....... .......++..|+|||.+.+..++.++|||||||++||++| |+.||... . ..+..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-----~---~~~~~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL-----S---NEEVL 231 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC-----C---HHHHH
Confidence 999999876543221 11222346778999999988889999999999999999998 99998521 1 11111
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..... .. ....+......+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 232 ~~~~~-~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 232 KFVID-GG---------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHhc-CC---------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111 10 011112235678999999999999999999999999863
No 88
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.8e-40 Score=314.50 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=202.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
+|+..+.||+|+||.||+|... ....+++|.+...........+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999853 2357899988765444444578899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 013238 197 VYPFMVNGSVASCLRERGQ--------------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAAN 256 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~N 256 (447)
++||+.+++|.+++..... ...++++..++.++.|++.||+|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999998865321 123588999999999999999999999 99999999999
Q ss_pred EEECCCCcEEEeecCCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccC
Q 013238 257 ILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAN 334 (447)
Q Consensus 257 ill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~ 334 (447)
||+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--- 234 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--- 234 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC---
Confidence 99999999999999999765332221 1122235678999999988889999999999999999998 999985311
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...+.++ ... .............+.+++.+||+.+|.+||++.++++.|+++
T Consensus 235 --~~~~~~~----~~~---------~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 235 --PERLFNL----LKT---------GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred --HHHHHHH----HhC---------CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 1111111 111 011111222345688999999999999999999999999874
No 89
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.4e-40 Score=316.40 Aligned_cols=258 Identities=24% Similarity=0.382 Sum_probs=200.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-C--cEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD-G--SLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~-~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 197 (447)
++|+..+.||+|+||.||+|...+ + ..+++|.++..........+.+|++++.++ +||||+++++++......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468888999999999999998753 3 347888887544444445688999999999 799999999999988899999
Q ss_pred EecccCCcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcE
Q 013238 198 YPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 265 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~ 265 (447)
+||+++++|.+++..... ....+++..++.++.|++.||+|||++ +++||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999965431 113488999999999999999999999 99999999999999999999
Q ss_pred EEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHH
Q 013238 266 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 266 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 344 (447)
||+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||.... ..+..
T Consensus 159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~--------~~~~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT--------CAELY 228 (297)
T ss_pred EECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHH
Confidence 999999986432111 1111123457999999988899999999999999999997 999995321 11111
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
...... ............+.+++.+||+.+|.+|||+.++++.|+.+.
T Consensus 229 ~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 229 EKLPQG----------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred HHHhcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111 111111223456889999999999999999999999988644
No 90
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-40 Score=324.23 Aligned_cols=261 Identities=20% Similarity=0.239 Sum_probs=195.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
..+|+..+.||+|+||.||++... +++.||+|.... ..+.+|+++++.++||||+++++++......++++|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 457999999999999999999875 688999996532 246789999999999999999999998889999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
++ .++|..++.... .+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 164 ~~-~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 164 RY-KTDLYCYLAAKR----NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred cC-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 99 468888876532 388999999999999999999999 9999999999999999999999999999754322
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCC---cccHHHHHHHHhhcc-----
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD---DVMLLDWVKGLLKEK----- 351 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~----- 351 (447)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||-........ ...+...+.......
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 222333456999999999999999999999999999999999999886321110000 000110100000000
Q ss_pred ----cccccc---------ccccCC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 352 ----KLEQLV---------DSDMEG--NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 352 ----~~~~~~---------d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...... .+.... .........+.+++.+||+.||.+|||+.|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 000000 001123457889999999999999999999985
No 91
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-40 Score=312.48 Aligned_cols=259 Identities=26% Similarity=0.372 Sum_probs=203.3
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCc
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 193 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 193 (447)
.+++|.+.+.||+|++|.||+|.+.+ +..||+|.+...........+..|+.+++.++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 45678889999999999999998753 567899988755444445568899999999999999999999998888
Q ss_pred ceEEEecccCCcchhhhhhcCCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC---cEEE
Q 013238 194 RLLVYPFMVNGSVASCLRERGQS---QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAVV 267 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~---~~kl 267 (447)
.+++|||+++++|.+++...... ...+++..+..++.||+.||+|||++ +++|+||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 99999999999999998765321 22489999999999999999999999 999999999999998754 5999
Q ss_pred eecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHH
Q 013238 268 GDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVK 345 (447)
Q Consensus 268 ~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 345 (447)
+|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |..||..... .....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--------~~~~~ 232 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--------QEVME 232 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence 9999998653222111 111123467999999998899999999999999999997 9999853111 11111
Q ss_pred HHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
...... ....+......+.+++.+||+.+|.+|||+.+|++.|+
T Consensus 233 ~~~~~~----------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 FVTGGG----------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHcCC----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111111 11112223456889999999999999999999999886
No 92
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.5e-40 Score=311.78 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=197.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCc----EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
++|+..+.||+|+||+||+|.+. +++ .+++|.+...........+..|+..++.++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 56788899999999999999874 344 4788887543333333467778888999999999999998754 45789
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
++||+++|+|.+++..... .+++..++.++.||+.||+|||++ +++||||||+||++++++.+||+|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRD---SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 9999999999999976432 489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 277 DYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 277 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .....+++ ....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~~----~~~~-- 228 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR-----PHEVPDLL----EKGE-- 228 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH----HCCC--
Confidence 432221 1223346778999999998899999999999999999998 999985311 11111111 1110
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
... ....+...+.+++.+||..+|.+|||+.++++.|...
T Consensus 229 ~~~-------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 229 RLA-------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred cCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 000 0111234578899999999999999999999988763
No 93
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=307.71 Aligned_cols=258 Identities=24% Similarity=0.357 Sum_probs=197.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----cceE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERLL 196 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 196 (447)
.|...+++|+|+||.||+|... +++.||||++..+..- -.+|+++|+++.|||||++..++.... ...+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 4566789999999999999975 5789999999765432 246899999999999999998876432 2348
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEeecCCccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLAKL 275 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~~ 275 (447)
|||||+. +|.++++........++...++-+..||++||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999966 99999986544445588888999999999999999998 99999999999999976 9999999999998
Q ss_pred cCCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 276 MDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 276 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
+......... ..|..|.|||.+.+. .|+.+.||||.||++.||+-|+.-|... .....+...+ .++.....+
T Consensus 176 L~~~epniSY--icSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~----s~~dQL~eIi-k~lG~Pt~e 248 (364)
T KOG0658|consen 176 LVKGEPNISY--ICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD----SSVDQLVEII-KVLGTPTRE 248 (364)
T ss_pred eccCCCceeE--EEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC----CHHHHHHHHH-HHhCCCCHH
Confidence 8766555333 358899999998775 6899999999999999999999999531 1122222222 222222222
Q ss_pred cccc----------cccCC-----CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 355 QLVD----------SDMEG-----NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 355 ~~~d----------~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
++.. +.+.. -.......+..+++.++++.+|.+|.++.|++.
T Consensus 249 ~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 249 DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 2111 11111 122334567899999999999999999998875
No 94
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.8e-40 Score=317.95 Aligned_cols=242 Identities=23% Similarity=0.288 Sum_probs=193.3
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+.||+|+||.||++... +|+.||+|.+..... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999875 689999999975432 222345678999999999999999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 284 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 284 (447)
+|..++.... .+++..++.++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 152 (323)
T cd05595 81 ELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccc
Confidence 9998886543 489999999999999999999999 99999999999999999999999999987532221 122
Q ss_pred eccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCC
Q 013238 285 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGN 364 (447)
Q Consensus 285 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 364 (447)
....|++.|+|||++.+..++.++|||||||++|||++|+.||.... ............ ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~~~~~~-------~~---- 213 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEE-------IR---- 213 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHhcCC-------CC----
Confidence 33458999999999999999999999999999999999999995311 111111111100 01
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 365 YIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 365 ~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
.+......+.+++.+||+.||.+|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1112345688999999999999998 7777765
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.8e-41 Score=326.58 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=201.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|.+.+.||+|+||+||+|... +++.||||++..... ......+..|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999976 689999999975432 123446888999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++... ..+++..++.++.||+.||+|||+. +++||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999999765 2489999999999999999999998 999999999999999999999999999976543
Q ss_pred CC----------------------------CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccc
Q 013238 279 KD----------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 330 (447)
Q Consensus 279 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~ 330 (447)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 01122345899999999999999999999999999999999999999532
Q ss_pred cccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 013238 331 RLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-MSEVVRM 397 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~~ 397 (447)
. ............ ..............+.+++.+|++ +|.+||+ +.++++.
T Consensus 234 ~--------~~~~~~~i~~~~-------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 T--------LQETYNKIINWK-------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred C--------HHHHHHHHhccC-------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1 111111111100 000000011134568889999997 9999999 9999874
No 96
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.3e-40 Score=313.50 Aligned_cols=263 Identities=26% Similarity=0.429 Sum_probs=205.6
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 191 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 191 (447)
++..++|++.+.||+|+||.||+|... .+..||+|.+...........+.+|+..++.++|+||+++++++...
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 356788999999999999999999753 24579999886544333445678899999999999999999999988
Q ss_pred CcceEEEecccCCcchhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcE
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQ------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 265 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~ 265 (447)
...+++|||+.+|+|.+++..... ......+..+..++.|++.||.|||++ +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 899999999999999999976432 123467788899999999999999999 99999999999999999999
Q ss_pred EEeecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHH
Q 013238 266 VVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDW 343 (447)
Q Consensus 266 kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 343 (447)
+|+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.... ..+.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~--------~~~~ 230 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--------NEQV 230 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHH
Confidence 999999987543222111 112234678999999998899999999999999999998 788885311 1111
Q ss_pred HHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 344 VKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 344 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.......... .........+.+++.+||+.+|.+|||+.++++.|++.
T Consensus 231 ~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 231 LKFVMDGGYL----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHcCCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1111111110 01112245799999999999999999999999999874
No 97
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.4e-40 Score=315.45 Aligned_cols=261 Identities=25% Similarity=0.408 Sum_probs=205.8
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeec
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 190 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 190 (447)
....++|...+.||+|+||.||++... .+..+|||.++..........+.+|+++++++ +|+||+++++++..
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 345578999999999999999999742 24579999987654444445788999999999 79999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
.+..+++|||+.+|+|.++++.... ..+++..++.++.+++.||+|||++ +++|+||||+|||++.++.++|+||
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCC
Confidence 9999999999999999999975432 2389999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHh
Q 013238 271 GLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 271 gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
|+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ...... ..
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~----~~~~~~----~~ 257 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV----DSKFYK----LI 257 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc----hHHHHH----HH
Confidence 999765432211 1122335678999999999899999999999999999998 9999853110 001111 11
Q ss_pred hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 349 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 349 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
... ............+.+++.+||+.+|++|||+.++++.|++
T Consensus 258 ~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 258 KEG---------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred HcC---------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 111 0111111223568999999999999999999999999986
No 98
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4e-40 Score=307.09 Aligned_cols=254 Identities=27% Similarity=0.409 Sum_probs=201.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
.++|+..+.||+|++|.||++....+..+|+|.+..... ....+.+|+++++.++|+|++++++++. .+..+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 456888899999999999999987777899998865332 2346888999999999999999998874 4568999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+++|.+++.... ...+++..+..++.+++.||+|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 82 MGKGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999997643 23478999999999999999999999 99999999999999999999999999997654332
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
........++..|+|||...+..++.++||||||+++|||++ |+.||.... .. +.........
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~---~~~~~~~~~~-------- 220 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV-----NR---EVLEQVERGY-------- 220 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC-----HH---HHHHHHHcCC--------
Confidence 222222335678999999988899999999999999999999 899985311 11 1111111110
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
...........+.+++.+||+.+|.+||++++++++|+.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 --RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011122334668999999999999999999999999985
No 99
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3e-40 Score=319.16 Aligned_cols=252 Identities=25% Similarity=0.309 Sum_probs=196.3
Q ss_pred CCCCCCeeeecCCeEEEEEEEC----CCcEEEEEEeccccc---cchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERT---QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTER 194 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 194 (447)
+|++.+.||+|+||.||+++.. +++.||+|++..... ......+..|++++..++ |+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999999753 578999999865321 122345778999999994 99999999999988999
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++||||+.+|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD----NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 99999999999999987543 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
..............||..|+|||++.+. .++.++|||||||++|||+||+.||..... ..............
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~~~~~~~~~~~~~~--- 226 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE----RNTQSEVSRRILKC--- 226 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC----CCCHHHHHHHHhcC---
Confidence 6543333333345689999999999765 478899999999999999999999963211 11111111111110
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
+..+ .......+.+++.+||+.||.+|| +++++++
T Consensus 227 ----~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 ----DPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ----CCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1111 112334578899999999999999 5666664
No 100
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-40 Score=314.36 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=202.1
Q ss_pred CCCCCCeeeecCCeEEEEEEECC------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
+|+..+.||+|+||.||+|...+ +..||+|+++..........+..|+.++..++|+||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 46667889999999999998642 478999999755433334568889999999999999999999999899999
Q ss_pred EEecccCCcchhhhhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc
Q 013238 197 VYPFMVNGSVASCLRERG------------QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 264 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~ 264 (447)
++||+.+++|.+++.... .....+++..++.++.|++.||.|||++ +++||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999985321 1123488899999999999999999999 9999999999999999999
Q ss_pred EEEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHH
Q 013238 265 AVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 342 (447)
Q Consensus 265 ~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 342 (447)
+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||... ...+
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--------~~~~ 234 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--------SNQD 234 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--------CHHH
Confidence 99999999886533221 11222345778999999988889999999999999999998 88888531 1112
Q ss_pred HHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 343 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
+........ . ......+...+.+++.+||+.+|.+||++.++++.|+.
T Consensus 235 ~~~~i~~~~-~---------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMIRNRQ-V---------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHcCC-c---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 222211111 0 11122345668899999999999999999999999974
No 101
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.7e-40 Score=313.05 Aligned_cols=260 Identities=26% Similarity=0.435 Sum_probs=204.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcc
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 194 (447)
.++|.+.+.||+|+||.||++... ++..+|+|.+.... ......+.+|++++++++|+||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 82 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 457888899999999999999752 24568999886543 23345688999999999999999999999999999
Q ss_pred eEEEecccCCcchhhhhhcCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcE
Q 013238 195 LLVYPFMVNGSVASCLRERGQ---------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 265 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~ 265 (447)
+++|||+++++|.+++..... ....+++..++.++.|++.||+|||++ +++||||||+||++++++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcE
Confidence 999999999999999875431 223489999999999999999999999 99999999999999999999
Q ss_pred EEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHH
Q 013238 266 VVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDW 343 (447)
Q Consensus 266 kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 343 (447)
+|+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||.... ....
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~--------~~~~ 231 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEV 231 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHH
Confidence 9999999975532221 11122235678999999998899999999999999999998 899985321 1111
Q ss_pred HHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 344 VKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 344 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
....... .... ........+.+++.+||+.||.+|||+.+++..|+++.
T Consensus 232 ~~~i~~~-~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 232 IECITQG-RVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HHHHHcC-CcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1111111 1000 01122356899999999999999999999999998754
No 102
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3e-40 Score=309.25 Aligned_cols=257 Identities=26% Similarity=0.447 Sum_probs=204.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CC---cEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DG---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
.++|+..+.||+|+||.||+|... ++ ..+|+|.+...........+..|+++++.++|+|++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999875 23 37999998755434445578899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+|||+++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||||+||++++++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 84 ITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 999999999999987543 2489999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCCceeec--cccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 277 DYKDTHVTTA--VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 277 ~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
.......... ...+..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--------~~~~~~~i~~~~-- 227 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--------NHEVMKAINDGF-- 227 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--------HHHHHHHHhcCC--
Confidence 4332221111 123457999999988889999999999999999997 999995311 112222221110
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...........+.+++.+||+.+|++||++.+|++.|+++
T Consensus 228 --------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 --------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111122346689999999999999999999999999864
No 103
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.8e-40 Score=308.15 Aligned_cols=257 Identities=27% Similarity=0.436 Sum_probs=206.2
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+..++|++.+.||+|++|.||+|...++..+|||.+..... ....+.+|++++++++|+|++++++++......+++|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 45678999999999999999999988788899999875432 3456889999999999999999999998888999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++..... ..+++..+..++.+++.||.|||++ +++|+||||+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 81 EYMSKGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred eccCCCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 99999999999976432 3489999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
..........++..|+|||.+.+..++.++||||||+++|||++ |+.||... .. ...........
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-----~~---~~~~~~~~~~~------ 221 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM-----TN---REVLEQVERGY------ 221 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC-----CH---HHHHHHHHcCC------
Confidence 22111112224568999999998889999999999999999998 99998421 11 11111111110
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
........+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus 222 ----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 ----RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001111224568999999999999999999999999875
No 104
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-41 Score=306.92 Aligned_cols=250 Identities=21% Similarity=0.351 Sum_probs=209.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEE-CCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
..+|++.+.||+|.||+|-+|.. ..|+.||||.+++...... ...+.+|+++|+.++||||+.++++|.+.+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35788888999999999999985 5799999999987654433 34578999999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||..+|.|.+++..++. +++.+...++.||+.|+.|+|.+ +++|||||.+|||+|.++++||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence 999999999999987654 99999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCceeeccccccCccccccccCCCC-CchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.......++|++-|.+||++.+.+| .+..|-||||++||.|+.|.-||+.- +....+++..... .
T Consensus 205 --~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~--------Dhk~lvrQIs~Ga-Y--- 270 (668)
T KOG0611|consen 205 --DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR--------DHKRLVRQISRGA-Y--- 270 (668)
T ss_pred --cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc--------hHHHHHHHhhccc-c---
Confidence 3444566789999999999999988 67899999999999999999999642 2333333322211 1
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
. .++.+....-||.+||..||..|-|+.+|...-.
T Consensus 271 r--------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 271 R--------EPETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred c--------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 1 1112334667899999999999999999987654
No 105
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.1e-41 Score=327.70 Aligned_cols=255 Identities=21% Similarity=0.268 Sum_probs=200.1
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
..++|+..+.||+|+||.||++... +++.||+|.+..... ......+.+|+++++.++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4568889999999999999999876 588999999964321 2223357789999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 121 v~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 99999999999998653 278888999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeeccccccCccccccccCC----CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTG----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
............||+.|+|||++.+. .++.++|||||||++|||++|+.||.... .............
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~~ 264 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIMDHKN 264 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC--------HHHHHHHHHcCCC
Confidence 43322222345689999999998653 47889999999999999999999995321 1111112111110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPME--RPKMSEVVRM 397 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 397 (447)
. +...........+.+++.+||+.+|.+ |+|+.++++.
T Consensus 265 ~-------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 S-------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred c-------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 000001123456788999999999987 9999998775
No 106
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.7e-40 Score=306.12 Aligned_cols=248 Identities=24% Similarity=0.352 Sum_probs=195.2
Q ss_pred eeeecCCeEEEEEEEC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCc
Q 013238 129 ILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 205 (447)
.||+|+||.||+|.+. ++..||+|.+...........+.+|+.++++++|+||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999764 355799999976544444556889999999999999999999875 456799999999999
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee-
Q 013238 206 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT- 284 (447)
Q Consensus 206 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~- 284 (447)
|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++...........
T Consensus 81 L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSGKK---DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 999987533 2489999999999999999999999 999999999999999999999999999976543322111
Q ss_pred -eccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 285 -TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 285 -~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
....++..|+|||++.+..++.++||||||+++||+++ |..||.... ..++........ .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~----------~ 216 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--------GPEVMSFIEQGK----------R 216 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHHHCCC----------C
Confidence 11123568999999988889999999999999999996 999995321 111111111111 1
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...+..+...+.+++.+||+.+|++||++.+|.+.|+..
T Consensus 217 ~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 217 LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 111223356788999999999999999999999999864
No 107
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.8e-40 Score=335.44 Aligned_cols=257 Identities=23% Similarity=0.304 Sum_probs=204.4
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT----- 192 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 192 (447)
..++|.+.+.||+|+||+||+|... +|+.||||.+..... ......+.+|+..+..++|+|++++.+.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999865 689999999865432 233446788999999999999999887765322
Q ss_pred ---cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEee
Q 013238 193 ---ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 269 (447)
Q Consensus 193 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 269 (447)
..++||||+++|+|.+++........++++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 25799999999999999987655555699999999999999999999999 999999999999999999999999
Q ss_pred cCCccccCCCC-CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHh
Q 013238 270 FGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 270 fgl~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||... .....+....
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~--------~~~~~~~~~~ 258 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE--------NMEEVMHKTL 258 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHh
Confidence 99998654322 12223456899999999999999999999999999999999999999532 1122222221
Q ss_pred hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 349 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 349 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
... . ...+......+.+++.+||+.||.+|||+.++++.
T Consensus 259 ~~~-----~-----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGR-----Y-----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCC-----C-----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 110 0 01112234568899999999999999999999864
No 108
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.5e-40 Score=310.67 Aligned_cols=262 Identities=25% Similarity=0.387 Sum_probs=192.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC--CCcEEEEEEeccccccc-hHHHHHHHHHHHHhc---CCCceeeEeeeeec-----
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT--DGSLVAVKRLKEERTQG-GELQFQTEVEMISMA---VHRNLLRLRGFCMT----- 190 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l---~h~niv~l~~~~~~----- 190 (447)
++|+..+.||+|+||.||+|... +++.||+|.++...... ....+.+|+++++.+ .||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999863 46889999986543222 233456677766655 69999999998852
Q ss_pred CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
....+++|||+. ++|.+++..... ..+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 345789999995 689888865432 2489999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
|+++..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.... .......+......
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~-----~~~~~~~i~~~~~~ 227 (290)
T cd07862 155 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-----DVDQLGKILDVIGL 227 (290)
T ss_pred cceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHHhCC
Confidence 999765432 22334458999999999988899999999999999999999999996321 11111111111000
Q ss_pred c---ccc-------cccccccCC---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 351 K---KLE-------QLVDSDMEG---NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 351 ~---~~~-------~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
. ... ......... .........+.+++.+||+.||++|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 000 000000000 001123355789999999999999999999985
No 109
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.3e-40 Score=309.18 Aligned_cols=248 Identities=25% Similarity=0.322 Sum_probs=194.3
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
||+|+||+||++... +++.+|+|.+....... ....+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999875 68899999986543221 224567899999999999999999999988899999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeec
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 286 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 286 (447)
...+.........+++..++.++.||+.||.|||++ +|+||||||+||++++++.++|+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 988865444445689999999999999999999999 999999999999999999999999999976543222 1223
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
..|++.|+|||++.+..++.++||||||+++|||++|+.||..... ........... .... ....
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~---------~~~~--~~~~ 221 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRI---------LNDS--VTYP 221 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCc----chhHHHHHHhh---------cccC--CCCc
Confidence 4589999999999999999999999999999999999999953111 10111111111 1110 0112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 367 EEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
......+.+++.+||+.||.+|| |++++++
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 23456688999999999999999 5565554
No 110
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4e-40 Score=317.65 Aligned_cols=246 Identities=25% Similarity=0.329 Sum_probs=192.7
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||.||++... +++.||+|+++.... ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999876 588999999975432 22234577888988888 699999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~ 152 (329)
T cd05588 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDT 152 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-CCc
Confidence 99998886542 489999999999999999999999 9999999999999999999999999998743211 122
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||..|+|||++.+..++.++|||||||++|||++|+.||+.............++.......... .+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-- 224 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------RI-- 224 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------CC--
Confidence 2334689999999999999999999999999999999999999974332222222222332222221111 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~ 391 (447)
+......+.+++.+||+.||.+|||+
T Consensus 225 --p~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 225 --PRSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred --CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11223458889999999999999983
No 111
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.2e-40 Score=319.71 Aligned_cols=262 Identities=20% Similarity=0.346 Sum_probs=193.9
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----cce
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERL 195 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 195 (447)
+|+..+.||+|+||.||+|... +++.||||++..... ......+.+|+++++.++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4777889999999999999975 689999999864322 223346889999999999999999999876432 469
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
+||||+. ++|.+++.... .+++..+..++.||++||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKAND----DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999994 68888886542 389999999999999999999999 999999999999999999999999999975
Q ss_pred cCCCCC--ceeeccccccCccccccccC--CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc-
Q 013238 276 MDYKDT--HVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE- 350 (447)
Q Consensus 276 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 350 (447)
...... .......|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+......
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~-----~~~~~~~~~~~~~~ 227 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV-----VHQLDLITDLLGTP 227 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh-----HHHHHHHHHHhCCC
Confidence 432211 11233468999999999866 6789999999999999999999999953211 1111111111000
Q ss_pred ----------cccccccc---cccCCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 351 ----------KKLEQLVD---SDMEGN---YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 351 ----------~~~~~~~d---~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
......+. ...... ........+.+++.+||+.||.+|||+.++++.
T Consensus 228 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 228 SPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000 000000 001123457899999999999999999999863
No 112
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-40 Score=317.06 Aligned_cols=262 Identities=28% Similarity=0.402 Sum_probs=205.0
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC--------CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeee
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 189 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 189 (447)
+..++|.+.+.||+|+||.||++... +...+|+|.+...........+..|++++..+ +|+||+++++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 33567999999999999999999753 23579999997654444445688899999999 7999999999999
Q ss_pred cCCcceEEEecccCCcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCE
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANI 257 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Ni 257 (447)
..+..++||||+.+|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999976432 123488999999999999999999999 999999999999
Q ss_pred EECCCCcEEEeecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCC
Q 013238 258 LLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAND 335 (447)
Q Consensus 258 ll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~ 335 (447)
+++.++.+||+|||++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~----- 246 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV----- 246 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-----
Confidence 99999999999999987553221111 111224568999999998889999999999999999998 88888421
Q ss_pred CcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 336 DDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...+........ .....+......+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 247 ---~~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 247 ---PVEELFKLLKEG----------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred ---CHHHHHHHHHcC----------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 111111111111 01111223345788999999999999999999999999863
No 113
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4e-40 Score=317.53 Aligned_cols=246 Identities=25% Similarity=0.329 Sum_probs=191.2
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||.||++... +++.||+|.++..... .....+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 5789999999764322 2233567788887766 799999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~ 152 (329)
T cd05618 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DT 152 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Cc
Confidence 99988876542 489999999999999999999999 99999999999999999999999999987532221 12
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...............++.........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------- 222 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------- 222 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------
Confidence 2334689999999999999999999999999999999999999964222222222222222222111111
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~ 391 (447)
..+......+.+++.+||+.||.+|||+
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1112234557899999999999999984
No 114
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-40 Score=315.91 Aligned_cols=262 Identities=27% Similarity=0.408 Sum_probs=206.6
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC--------CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeee
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 189 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 189 (447)
+..++|.+.+.||+|+||.||+|... ++..||+|.+...........+.+|+.+++.+ +|+||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 45678888999999999999999742 24579999987554444455788999999999 8999999999999
Q ss_pred cCCcceEEEecccCCcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCE
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANI 257 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Ni 257 (447)
.....+++|||+.+|+|.+++..... ....+++..+..++.|++.||.|||++ +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999999976432 123478899999999999999999999 999999999999
Q ss_pred EECCCCcEEEeecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCC
Q 013238 258 LLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAND 335 (447)
Q Consensus 258 ll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~ 335 (447)
++++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~----- 243 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI----- 243 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-----
Confidence 99999999999999998664322221 122235678999999988889999999999999999998 78887421
Q ss_pred CcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 336 DDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...++......... ..........+.+++.+||+.+|.+|||+.++++.|+++
T Consensus 244 ---~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 244 ---PVEELFKLLKEGHR----------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred ---CHHHHHHHHHcCCc----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 12222222211111 111123446688999999999999999999999999763
No 115
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.5e-40 Score=317.06 Aligned_cols=243 Identities=25% Similarity=0.296 Sum_probs=194.6
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+.||+|+||.||++... +|+.||+|++..... ......+.+|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999875 689999999975432 223346788999999999999999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 284 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 284 (447)
+|..++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~ 152 (328)
T cd05593 81 ELFFHLSRER----VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATM 152 (328)
T ss_pred CHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccc
Confidence 9998886542 489999999999999999999999 99999999999999999999999999987532221 122
Q ss_pred eccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCC
Q 013238 285 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGN 364 (447)
Q Consensus 285 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 364 (447)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........... +..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~--------~~~~~~~~~~~-------~~~---- 213 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILME-------DIK---- 213 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC--------HHHHHHHhccC-------Ccc----
Confidence 33468999999999999899999999999999999999999995311 11111111110 001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 013238 365 YIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVRM 397 (447)
Q Consensus 365 ~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 397 (447)
.+......+.+++.+||+.||.+|| ++.++++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1112345688999999999999997 78888754
No 116
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-40 Score=333.78 Aligned_cols=252 Identities=20% Similarity=0.259 Sum_probs=201.7
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-C-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-D-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
.|...+.||+|++|.||+|... + ++.||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 4788899999999999999864 3 6788888764432 22334577899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++|+|.+++........++++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 999999998876544445689999999999999999999999 99999999999999999999999999998654322
Q ss_pred C-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 281 T-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 281 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......... ..
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~--------~~~~~~~~~~~~-~~----- 289 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS--------QREIMQQVLYGK-YD----- 289 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-CC-----
Confidence 1 12334568999999999999999999999999999999999999995311 112222211111 00
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+......+.+++.+||+.+|.+|||+.+++.
T Consensus 290 ----~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 ----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 011123356889999999999999999999875
No 117
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.6e-40 Score=309.97 Aligned_cols=258 Identities=25% Similarity=0.391 Sum_probs=202.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCc----EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
.++|+..++||+|+||+||+|... +|+ .||+|.+...........+.+|..++..+.|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 457888899999999999999854 444 4899998765554455678899999999999999999999875 4578
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
++++|+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+|||+++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK---DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 9999999999999987543 2489999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 276 MDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 276 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||+... ......++.. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~----~-- 227 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-----AREIPDLLEK----G-- 227 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHC----C--
Confidence 64322211 111234678999999988899999999999999999998 899985311 1111111111 1
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 403 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 403 (447)
............+.+++.+||+.||++||++.++++.|+....
T Consensus 228 -------~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 228 -------ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred -------CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0011112234568899999999999999999999999876543
No 118
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-40 Score=325.32 Aligned_cols=258 Identities=21% Similarity=0.276 Sum_probs=198.8
Q ss_pred HHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCc
Q 013238 117 LQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 193 (447)
Q Consensus 117 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 193 (447)
+....++|+..+.||+|+||.||++... +++.+|+|.+..... ......+.+|+++++.++||||+++++++.+...
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3445678999999999999999999976 588999999864321 2223457789999999999999999999999999
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
.++||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||++
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccc
Confidence 99999999999999998653 278889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccCccccccccCC----CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh
Q 013238 274 KLMDYKDTHVTTAVRGTIGHIAPEYLSTG----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 349 (447)
Q Consensus 274 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
...............||+.|+|||++.+. .++.++|||||||++|||++|+.||.... ..........
T Consensus 190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~--------~~~~~~~i~~ 261 (370)
T cd05621 190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS--------LVGTYSKIMD 261 (370)
T ss_pred eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC--------HHHHHHHHHh
Confidence 87643332223345699999999998654 37889999999999999999999995321 1111111111
Q ss_pred ccccccccccccCCCCcHHHHHHHHHHHHHccCCCCC--CCCCHHHHHHH
Q 013238 350 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPM--ERPKMSEVVRM 397 (447)
Q Consensus 350 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPt~~evl~~ 397 (447)
.... +...........+.+++..|++.++. .|+|+.++++.
T Consensus 262 ~~~~-------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 262 HKNS-------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcc-------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1100 00011112244567788888875554 38899988874
No 119
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-40 Score=320.99 Aligned_cols=253 Identities=20% Similarity=0.271 Sum_probs=200.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|...+.||+|+||+||++... +|+.||+|.++.... ......+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999876 688999999975432 223446788999999999999999999999989999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRYE---DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 9999999999997652 2489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccCcccccccc------CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLS------TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||.... .............
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~--------~~~~~~~i~~~~~ 226 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT--------SAKTYNNIMNFQR 226 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC--------HHHHHHHHHcCCC
Confidence 3333333346899999999986 4567889999999999999999999995311 1111122211111
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... .........+.+++..|++ +|.+|||+.+++.
T Consensus 227 ~~~~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 227 FLKF-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ccCC-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 1100 0011234557888999998 9999999998875
No 120
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.8e-40 Score=307.25 Aligned_cols=257 Identities=28% Similarity=0.432 Sum_probs=204.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-C---CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-D---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
.++|++.+.||+|+||.||+|... + +..+|+|.++..........+..|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 357888899999999999999864 2 347999998765444445578899999999999999999999998899999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++...
T Consensus 83 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD---GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 999999999999997643 2488999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCceeec--cccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 277 DYKDTHVTTA--VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 277 ~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
.......... ..++..|+|||++.+..++.++||||||+++||+++ |..||.... . .+..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~-----~---~~~~~~~~~~~~- 227 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS-----N---QDVIKAIEEGYR- 227 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC-----H---HHHHHHHhCCCc-
Confidence 4433222221 123467999999998889999999999999999886 999985311 0 111111111100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.......+..+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 228 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 ---------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011122345688999999999999999999999999863
No 121
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.4e-40 Score=306.37 Aligned_cols=260 Identities=21% Similarity=0.329 Sum_probs=207.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|++|.||++... +++.+|||.+..... ......+.+|+.+++.++|+||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 36777889999999999999964 789999998864322 223346888999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++.........+++..++.++.+++.||+|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999876444445689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.... .....++..|+|||++.+..++.++||||||+++|+|++|..||.... .....+..... ....
T Consensus 159 ~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~------~~~~ 225 (267)
T cd08229 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIE------QCDY 225 (267)
T ss_pred CCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc------chHHHHhhhhh------cCCC
Confidence 2221 223457889999999988889999999999999999999999985311 11111111111 0011
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
+ ..........+.+++.+||+.+|++|||+.+|++.+.+
T Consensus 226 ~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 226 P---PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred C---CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 1 11112345678899999999999999999999998875
No 122
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.9e-40 Score=303.95 Aligned_cols=250 Identities=29% Similarity=0.460 Sum_probs=203.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
.++|+..+.||+|++|.||+|... |+.||+|.+..... ....+.+|+.+++.++|+||+++++++......+++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 457888899999999999999875 78899999976543 345788999999999999999999999988899999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++..... ..+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||.++......
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 82 MAKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 999999999976542 2489999999999999999999999 99999999999999999999999999998653221
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
. ....+..|+|||++.+..++.++||||||+++|||++ |..||.... ..+........
T Consensus 157 ~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~--------- 215 (256)
T cd05039 157 D----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPHVEKG--------- 215 (256)
T ss_pred c----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHhcC---------
Confidence 1 2234668999999988889999999999999999997 999985311 11111111111
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
............+.+++.+||+.+|++|||+.+++.+|+.
T Consensus 216 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 216 -YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0111112234678899999999999999999999999975
No 123
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=318.82 Aligned_cols=247 Identities=23% Similarity=0.278 Sum_probs=198.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC--CcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD--GSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
.++|...+.||+|+||.||+|.+.+ +..||+|.+..... ......+.+|++++..++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3578888999999999999998653 36899999864322 2233467889999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
||||+.+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 109 v~Ey~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK----RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 999999999999997643 388999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............
T Consensus 182 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--------~~~~~~~i~~~~----- 244 (340)
T PTZ00426 182 DTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE--------PLLIYQKILEGI----- 244 (340)
T ss_pred CCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC--------HHHHHHHHhcCC-----
Confidence 422 123468999999999998889999999999999999999999995311 111111111110
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVRM 397 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 397 (447)
. ..+......+.+++.+|++.||.+|+ |++++++.
T Consensus 245 ----~--~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 245 ----I--YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ----C--CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0 01111234578899999999999995 78877654
No 124
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.6e-40 Score=311.95 Aligned_cols=266 Identities=23% Similarity=0.389 Sum_probs=202.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC---------------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD---------------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 185 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 185 (447)
.++|++.+.||+|+||.||++...+ ...||+|.++..........+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4578889999999999999987532 2358999997654444455788999999999999999999
Q ss_pred eeeecCCcceEEEecccCCcchhhhhhcCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCE
Q 013238 186 GFCMTPTERLLVYPFMVNGSVASCLRERGQ--------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANI 257 (447)
Q Consensus 186 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Ni 257 (447)
+++......++||||+.+++|.+++..... ....+++..++.++.+++.||+|||++ +++|+||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 999999999999999999999999865321 112478899999999999999999999 999999999999
Q ss_pred EECCCCcEEEeecCCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh--CCCCcccccccC
Q 013238 258 LLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT--GQRAFDLARLAN 334 (447)
Q Consensus 258 ll~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt--g~~p~~~~~~~~ 334 (447)
++++++.+||+|||++......... ......++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~--- 237 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS--- 237 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC---
Confidence 9999999999999999765332211 1122335678999999988889999999999999999998 566774311
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
................ .... .......+..+.+++.+||+.+|.+|||+.+|++.|+.
T Consensus 238 --~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 --DEQVIENTGEFFRNQG-RQIY-----LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --hHHHHHHHHHhhhhcc-cccc-----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111111111111100 0000 01111234579999999999999999999999999863
No 125
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.1e-40 Score=304.48 Aligned_cols=246 Identities=24% Similarity=0.356 Sum_probs=194.0
Q ss_pred eeeecCCeEEEEEEEC---CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCC
Q 013238 129 ILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
.||+|+||.||+|.+. ++..+|+|+++..... .....+..|+.+++.+.|+||+++++++. ....+++|||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 5788999998654322 23456889999999999999999999875 45678999999999
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 284 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 284 (447)
+|.+++.... .+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||++...........
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQKNK----HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 9999986532 388999999999999999999999 999999999999999999999999999986643332211
Q ss_pred --eccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 285 --TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 285 --~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
....++..|+|||.+....++.++||||||+++|||++ |..||.... ...+.... ... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~i-~~~---------~ 215 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--------GNEVTQMI-ESG---------E 215 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-HCC---------C
Confidence 11224578999999988889999999999999999998 999995321 11111111 111 0
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
....+......+.+++.+||+.||++||++.+|.+.|++
T Consensus 216 ~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 216 RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 111122234568899999999999999999999999985
No 126
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.1e-40 Score=311.78 Aligned_cols=260 Identities=27% Similarity=0.446 Sum_probs=205.0
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCc
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 193 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 193 (447)
..++|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+.+++.++|+||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3567889999999999999999863 4678999998765444445568899999999999999999999998889
Q ss_pred ceEEEecccCCcchhhhhhcCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCC
Q 013238 194 RLLVYPFMVNGSVASCLRERGQ------------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAA 255 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~ 255 (447)
.+++|||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 9999999999999999875321 123478899999999999999999999 9999999999
Q ss_pred CEEECCCCcEEEeecCCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCccccccc
Q 013238 256 NILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLA 333 (447)
Q Consensus 256 Nill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~ 333 (447)
||++++++.++|+|||++......... .......+..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~--- 236 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM--- 236 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---
Confidence 999999999999999998754322211 1112224567999999988899999999999999999997 88888421
Q ss_pred CCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 334 NDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
...+........ ... .........+.+++.+||+.+|.+|||+.|+++.|++
T Consensus 237 -----~~~~~~~~~~~~-~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 -----AHEEVIYYVRDG-NVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -----CHHHHHHHHhcC-CCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111222221111 110 1111234668999999999999999999999999974
No 127
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.3e-40 Score=324.66 Aligned_cols=253 Identities=19% Similarity=0.264 Sum_probs=193.9
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.|+.++.||+|+||+||+|... +++.||||++..... ......+.+|++++..++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5778899999999999999875 588999999975432 2233468889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 999999999987643 388999999999999999999999 9999999999999999999999999997543110
Q ss_pred CC----------------------------------------------ceeeccccccCccccccccCCCCCchhhhHHH
Q 013238 280 DT----------------------------------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 313 (447)
Q Consensus 280 ~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSl 313 (447)
.. .......||..|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 00122468999999999998899999999999
Q ss_pred HHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHH--ccCCCCCCCCCH
Q 013238 314 GVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALL--CTQGSPMERPKM 391 (447)
Q Consensus 314 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPt~ 391 (447)
||++|||++|+.||..... ........... ..............+.+++.+ |+..++..||++
T Consensus 235 G~il~elltG~~Pf~~~~~--------~~~~~~i~~~~-------~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTP--------TETQLKVINWE-------NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhHHHHHHhCCCCCcCCCH--------HHHHHHHHccc-------cccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 9999999999999953211 00000111000 000000001122345566665 566777789999
Q ss_pred HHHHHH
Q 013238 392 SEVVRM 397 (447)
Q Consensus 392 ~evl~~ 397 (447)
.++++.
T Consensus 300 ~~~l~h 305 (381)
T cd05626 300 DDIKAH 305 (381)
T ss_pred HHHhcC
Confidence 999874
No 128
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3e-40 Score=317.74 Aligned_cols=242 Identities=25% Similarity=0.338 Sum_probs=193.0
Q ss_pred CeeeecCCeEEEEEEEC----CCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 128 NILGRGGFGKVYKGRLT----DGSLVAVKRLKEERT---QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+.||+|+||.||++... +++.||+|.++.... ......+..|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999853 578999999975322 22234577899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+++|.+++.... .+.+..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLEREG----IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 99999999987643 378888999999999999999999 99999999999999999999999999987533222
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||.... ........... .
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~--------~~~~~~~~~~~---------~ 216 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN--------RKKTIDKILKG---------K 216 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC--------HHHHHHHHHcC---------C
Confidence 22233468999999999998889999999999999999999999995321 11111121111 0
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
. ..+......+.+++.+||+.+|.+|| ++.++++
T Consensus 217 ~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 L--NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred C--CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0 11112235688999999999999999 7777766
No 129
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.4e-40 Score=314.62 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=200.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCc--EEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGS--LVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 197 (447)
++|+..+.||+|+||.||+|... ++. .+++|.++..........+.+|++++.++ +|+||+++++++...+..+++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 47788899999999999999875 344 46888776544444455788899999999 899999999999999999999
Q ss_pred EecccCCcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcE
Q 013238 198 YPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 265 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~ 265 (447)
|||+++++|.+++..... ....+++..++.++.|++.||+|||++ +++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999976432 123588999999999999999999999 99999999999999999999
Q ss_pred EEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHH
Q 013238 266 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 266 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 344 (447)
||+|||++....... ......++..|+|||++.+..++.++|||||||++|||+| |..||.... ..+..
T Consensus 164 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~~~ 233 (303)
T cd05088 164 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAELY 233 (303)
T ss_pred EeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC--------hHHHH
Confidence 999999986422111 1111124567999999988889999999999999999998 999985311 11111
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...... ............+.+++.+||+.+|++||++.++++.|+.+
T Consensus 234 ~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 234 EKLPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHhcC----------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111110 00011112345688999999999999999999999999864
No 130
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.5e-40 Score=311.38 Aligned_cols=258 Identities=26% Similarity=0.438 Sum_probs=203.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
.+|...+.||+|+||.||++... ++..+++|.+.... ......+.+|++.+++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 45777889999999999999743 34568899886443 223346889999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC
Q 013238 196 LVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 263 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~ 263 (447)
+||||+++++|.+++..... ....+++..++.++.+++.||+|||++ +++||||||+||++++++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 99999999999999976431 123488999999999999999999999 999999999999999999
Q ss_pred cEEEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHH
Q 013238 264 EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLL 341 (447)
Q Consensus 264 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 341 (447)
.++|+|||++........ .......++..|+|||++.+..++.++||||||+++|||+| |+.||.... ..
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------~~ 232 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--------NT 232 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HH
Confidence 999999999975533221 11222346778999999999999999999999999999999 999985321 11
Q ss_pred HHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 342 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
+.+.... ..... ......+..+.+++.+||+.+|.+|||+.+|++.|+.+
T Consensus 233 ~~~~~~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 233 EVIECIT-QGRVL---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HHHHHHh-CCCCC---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 1111111 11110 11122345688999999999999999999999999875
No 131
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.5e-39 Score=309.08 Aligned_cols=266 Identities=23% Similarity=0.382 Sum_probs=206.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-----------------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceee
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD-----------------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 183 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 183 (447)
.++|++.+.||+|+||.||++...+ +..||+|.+...........+.+|++++..++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999987642 24689999876654445567889999999999999999
Q ss_pred EeeeeecCCcceEEEecccCCcchhhhhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 013238 184 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAAN 256 (447)
Q Consensus 184 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~N 256 (447)
+++++......+++|||+.+++|.+++..... ....+++..++.++.|++.||+|||++ +++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999998999999999999999999876542 122589999999999999999999999 99999999999
Q ss_pred EEECCCCcEEEeecCCccccCCCCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh--CCCCccccccc
Q 013238 257 ILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT--GQRAFDLARLA 333 (447)
Q Consensus 257 ill~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt--g~~p~~~~~~~ 333 (447)
|++++++.++|+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~--- 237 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL--- 237 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc---
Confidence 9999999999999999876533221 12223346778999999988889999999999999999998 66777421
Q ss_pred CCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 334 NDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..................... .......+..+.+++.+||+.||.+|||+.+|++.|+.
T Consensus 238 --~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 238 --TDQQVIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred --ChHHHHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 111111111111111110100 11112234679999999999999999999999999863
No 132
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.5e-40 Score=322.02 Aligned_cols=253 Identities=19% Similarity=0.273 Sum_probs=197.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|+||+||+|... +++.||||++..... ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999976 589999999975422 222345778999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+|||++.++.++|+|||++..+..
T Consensus 81 E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMKKD----TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 9999999999987643 389999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCc-------------------------------------eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHH
Q 013238 279 KDTH-------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 321 (447)
Q Consensus 279 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ell 321 (447)
.... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 011235899999999999999999999999999999999
Q ss_pred hCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 013238 322 TGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK---MSEVVRM 397 (447)
Q Consensus 322 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~ 397 (447)
+|..||.... ................. .. .......+.+++.+|+. +|.+|++ +.++++.
T Consensus 234 ~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~-----~~--~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 234 VGYPPFCSDN--------PQETYRKIINWKETLQF-----PD--EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred cCCCCCCCCC--------HHHHHHHHHcCCCccCC-----CC--CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 9999995321 11111111111000000 00 01123457788888886 9999998 7777663
No 133
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.1e-40 Score=305.84 Aligned_cols=256 Identities=23% Similarity=0.421 Sum_probs=203.9
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+..++|...+.||+|+||.||++...++..+|+|.+.... .....+.+|+++++.++|+|++++.+++.. ...+++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 4557888999999999999999998777889999886532 223468889999999999999999999877 7789999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++.... ...+++..++.++.+++.||.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 80 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 80 EFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EeCCCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 9999999999997643 23478899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
..........++..|+|||++....++.++|+||||+++|+++| |+.||.... ......+.. ..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-----~~~~~~~~~---~~------- 219 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALE---RG------- 219 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHh---CC-------
Confidence 32222222335677999999988889999999999999999999 899985311 111111111 10
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
............+.+++.+||+.+|++||++.++++.|+.
T Consensus 220 ---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 220 ---YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011112234568899999999999999999999999975
No 134
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.4e-39 Score=310.47 Aligned_cols=239 Identities=24% Similarity=0.343 Sum_probs=187.3
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHh-cCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||.||+|... +++.||+|.++.... ......+..|.+++.. .+||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999975 578999999975432 1222344556666654 4799999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 81 GDLMFHIQSSG----RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence 99999886543 388999999999999999999999 99999999999999999999999999997543222 22
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~-----------~~ 213 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED--------EDELFDSILND-----------RP 213 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcC-----------CC
Confidence 334568999999999999899999999999999999999999995321 11111111110 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMSE 393 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 393 (447)
..+......+.+++.+||+.||.+||++.+
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 111123355788999999999999999753
No 135
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.8e-40 Score=300.33 Aligned_cols=266 Identities=24% Similarity=0.324 Sum_probs=204.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCc-eeeEeeeeecCC------
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRN-LLRLRGFCMTPT------ 192 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------ 192 (447)
..|...++||+|+||+||+|+.. +|+.||+|++..... +.......+|+-+++.++|+| |+.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 45666678999999999999865 689999999986654 334445789999999999999 999999998876
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..++|+||+ .-+|..++.........++...++.++.||+.||+|||++ +|+||||||.||||+++|.+||+|||+
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 778999999 5599999987653323477789999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc
Q 013238 273 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 351 (447)
Q Consensus 273 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (447)
|+..... ....+..++|.+|.|||++.+. .|+...||||+|||+.||++++..|.... +......+...+...
T Consensus 167 Ara~~ip-~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s-----e~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 167 ARAFSIP-MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS-----EIDQLFRIFRLLGTP 240 (323)
T ss_pred HHHhcCC-cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHHcCCC
Confidence 9965432 2235556689999999999887 68999999999999999999999885321 122222222222222
Q ss_pred cccccc------ccc--cC----C-CCcH---HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 352 KLEQLV------DSD--ME----G-NYIE---EEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 352 ~~~~~~------d~~--~~----~-~~~~---~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
....+- +.. .. . .... .......+++.+|++.+|.+|.|+..++..
T Consensus 241 ~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 241 NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111110 000 00 0 0001 111367899999999999999999998875
No 136
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-39 Score=306.01 Aligned_cols=255 Identities=27% Similarity=0.398 Sum_probs=195.9
Q ss_pred CCCCeeeecCCeEEEEEEECC-Cc--EEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecC------Ccc
Q 013238 125 SNRNILGRGGFGKVYKGRLTD-GS--LVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------TER 194 (447)
Q Consensus 125 ~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 194 (447)
.+.+.||+|+||.||+|...+ +. .+|+|.++.... ......+..|+++++.++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999998764 33 689998865432 22345688899999999999999999987532 246
Q ss_pred eEEEecccCCcchhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 195 LLVYPFMVNGSVASCLRERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
+++|||+.+|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999998875332 1223489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 273 AKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 273 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
++......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||.... ...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~ 230 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--------NSEIYDYLRQG 230 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHcC
Confidence 98654322211 112235678999999999899999999999999999999 788885311 11111111111
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 351 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 351 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
... .........+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 231 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 231 NRL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 110 0111234568999999999999999999999999986
No 137
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.6e-40 Score=321.59 Aligned_cols=200 Identities=22% Similarity=0.342 Sum_probs=172.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|+||+||++... +++.||+|++..... ......+..|++++..++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999875 588999999965322 222345778999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMKKD----TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 9999999999997643 489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCC----------------------------------ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCC
Q 013238 279 KDT----------------------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 324 (447)
Q Consensus 279 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~ 324 (447)
... .......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 0012346899999999999999999999999999999999999
Q ss_pred CCcc
Q 013238 325 RAFD 328 (447)
Q Consensus 325 ~p~~ 328 (447)
.||.
T Consensus 234 ~Pf~ 237 (363)
T cd05628 234 PPFC 237 (363)
T ss_pred CCCC
Confidence 9995
No 138
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.8e-40 Score=314.62 Aligned_cols=263 Identities=26% Similarity=0.420 Sum_probs=204.7
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC--------CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeee
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFC 188 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 188 (447)
....++|.+.+.||+|+||.||++... ....+|+|.++..........+..|+++++.+ +|+||+++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 344568888999999999999999742 24578999987654444445688899999998 699999999999
Q ss_pred ecCCcceEEEecccCCcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 013238 189 MTPTERLLVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAAN 256 (447)
Q Consensus 189 ~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~N 256 (447)
......+++|||+.+|+|.+++..... ....+++..+..++.|++.||.|||++ +++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 988889999999999999999976431 123588999999999999999999999 99999999999
Q ss_pred EEECCCCcEEEeecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccC
Q 013238 257 ILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAN 334 (447)
Q Consensus 257 ill~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~ 334 (447)
||+++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~--- 241 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP--- 241 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC---
Confidence 999999999999999998654322111 111224467999999988889999999999999999999 888884311
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..+..... .... ...........+.+++.+||+.+|.+|||+.++++.|++.
T Consensus 242 -----~~~~~~~~-~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 242 -----VEELFKLL-REGH---------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred -----HHHHHHHH-HcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11111111 1110 0111122345688999999999999999999999999864
No 139
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-39 Score=312.25 Aligned_cols=245 Identities=25% Similarity=0.340 Sum_probs=190.8
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHH---HhcCCCceeeEeeeeecCCcceEE
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMI---SMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
|++.+.||+|+||.||+|... +++.||||.++.... ......+..|.+++ ..++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999875 589999999975421 12223455565544 567899999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||+++|+|...+... .+++..++.++.||+.||+|||++ +++||||||+||++++++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999998887542 389999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
... .......|++.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 153 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~--------~~~~~~~i~~~~------ 217 (324)
T cd05589 153 GFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD--------EEEVFDSIVNDE------ 217 (324)
T ss_pred CCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC------
Confidence 222 22234568999999999999999999999999999999999999995321 111111111110
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 396 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 396 (447)
. ..+......+.+++.+||+.||.+||+ +.++++
T Consensus 218 -~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 218 -V----RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -C----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0 011123456789999999999999994 555544
No 140
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.1e-39 Score=303.56 Aligned_cols=248 Identities=29% Similarity=0.463 Sum_probs=196.9
Q ss_pred CeeeecCCeEEEEEEECC----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
++||+|+||.||+|.+.. +..+|+|.+...........+..|+++++.+.|+|++++++++. ....+++|||+.+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997642 26899999976654444567889999999999999999999875 4567999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|.+++.... .+++..++.++.|++.||+|||+. +++|+||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 99999997643 489999999999999999999999 99999999999999999999999999998664333221
Q ss_pred eec--cccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 284 TTA--VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 284 ~~~--~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
... ..++..|+|||.+.+..++.++||||||+++|||++ |..||.... ......++. ....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-----~~~~~~~~~---~~~~-------- 216 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-----GAEVIAMLE---SGER-------- 216 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHH---cCCc--------
Confidence 111 123467999999998899999999999999999998 999995321 111111111 1110
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..........+.+++.+||+.+|.+|||+.+|++.|+++
T Consensus 217 --~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 217 --LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 011122345688999999999999999999999999875
No 141
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.4e-39 Score=310.82 Aligned_cols=242 Identities=26% Similarity=0.360 Sum_probs=192.1
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||+||++... +++.||||.++.... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 578999999975432 22234566788888777 699999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|...+.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (318)
T cd05570 81 GDLMFHIQRSG----RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VT 152 (318)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cc
Confidence 99998886543 489999999999999999999999 99999999999999999999999999987532221 12
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||.... ............ .
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~--------~~~~~~~i~~~~-------~---- 213 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD--------EDELFQSILEDE-------V---- 213 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC--------HHHHHHHHHcCC-------C----
Confidence 233458999999999999999999999999999999999999995321 111111111110 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKM-----SEVVR 396 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 396 (447)
..+......+.+++.+||+.||.+|||+ .++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1111234568899999999999999999 76665
No 142
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.9e-40 Score=318.89 Aligned_cols=263 Identities=27% Similarity=0.420 Sum_probs=201.4
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEE------CCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecC
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTP 191 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 191 (447)
...++|++.+.||+|+||.||+|.. .+++.||||+++..........+.+|++++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 4567899999999999999999973 246789999997654443445688899999999 689999999988754
Q ss_pred -CcceEEEecccCCcchhhhhhcCCC------------------------------------------------------
Q 013238 192 -TERLLVYPFMVNGSVASCLRERGQS------------------------------------------------------ 216 (447)
Q Consensus 192 -~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------ 216 (447)
...+++|||+++|+|.+++......
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 4578999999999999998653210
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc-eeec
Q 013238 217 ---------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTA 286 (447)
Q Consensus 217 ---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~ 286 (447)
...+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||++......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12368888899999999999999999 9999999999999999999999999998764322211 1122
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCC
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNY 365 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 365 (447)
..++..|+|||.+.+..++.++||||||+++|||++ |..||..... . ............ ...
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~---~~~~~~~~~~~~----------~~~ 303 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----D---EEFCRRLKEGTR----------MRA 303 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc----c---HHHHHHHhccCC----------CCC
Confidence 235678999999988899999999999999999997 8989853110 0 011111111100 000
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 366 IEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 366 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
+......+.+++..||+.+|.+|||+.+|++.|+..
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111234688999999999999999999999999863
No 143
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.6e-39 Score=303.33 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=200.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc----hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG----GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
++|...+.||+|++|.||++... +++.+|+|.+....... ....+.+|++++++++||||+++++++......++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999865 58999999986443211 22457889999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
++||+++++|.+++.... .+++..++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 999999999999887543 378899999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCcee--eccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 277 DYKDTHVT--TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 277 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
........ ....++..|+|||++.+..++.++||||||+++|||++|+.||.... . . ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~--~-~~~~~~~~----- 221 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE-----A--M-AAIFKIAT----- 221 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc-----h--H-HHHHHHhc-----
Confidence 33221111 23447789999999999889999999999999999999999995311 0 0 10111110
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
..............+.+++.+||+.+|.+|||+.++++.
T Consensus 222 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 222 ----QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 001111222344568899999999999999999999874
No 144
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.8e-39 Score=308.66 Aligned_cols=266 Identities=23% Similarity=0.378 Sum_probs=203.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-----------------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceee
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-----------------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 183 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 183 (447)
.++|++.+.||+|+||.||++... ++..+|+|.+...........+.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 457899999999999999998532 234689999976544444567889999999999999999
Q ss_pred EeeeeecCCcceEEEecccCCcchhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 013238 184 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQS-------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAAN 256 (447)
Q Consensus 184 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~N 256 (447)
+++++...+..+++|||+.+++|.+++...... ...+++..++.++.|++.||+|||+. +++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 999999999999999999999999998764321 12377889999999999999999999 99999999999
Q ss_pred EEECCCCcEEEeecCCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh--CCCCccccccc
Q 013238 257 ILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT--GQRAFDLARLA 333 (447)
Q Consensus 257 ill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt--g~~p~~~~~~~ 333 (447)
||+++++.++|+|||+++.+...... ......++..|+|||...++.++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS-- 238 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC--
Confidence 99999999999999999765332211 1122234678999999888889999999999999999998 677874311
Q ss_pred CCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 334 NDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
................. ... ......+...+.+++.+||+.||.+|||+.+|++.|++
T Consensus 239 ---~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 239 ---DEQVIENTGEFFRDQGR-QVY-----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ---hHHHHHHHHHHHhhccc-ccc-----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111111111000 000 01112234678999999999999999999999999863
No 145
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-39 Score=304.90 Aligned_cols=251 Identities=26% Similarity=0.424 Sum_probs=195.6
Q ss_pred CeeeecCCeEEEEEEECC-Cc--EEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLTD-GS--LVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||.||+|...+ +. .+++|.++..........+.+|++++.++ .||||+++++++......+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998753 43 46888887544444455788999999999 799999999999998899999999999
Q ss_pred CcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 204 GSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 204 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
|+|.+++..... ....+++..++.++.+++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999876431 123478999999999999999999998 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
++........ ......+..|+|||++....++.++||||||+++|||++ |..||.... ..+........
T Consensus 158 l~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~--------~~~~~~~~~~~ 227 (270)
T cd05047 158 LSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAELYEKLPQG 227 (270)
T ss_pred Cccccchhhh--ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC--------HHHHHHHHhCC
Confidence 9863221111 111223567999999988889999999999999999997 999995311 11111111111
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 351 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 351 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.. ..........+.+++.+||+.+|.+|||+.+++..|+++
T Consensus 228 ~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 228 YR----------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CC----------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 00 011112345688999999999999999999999999864
No 146
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.5e-39 Score=305.07 Aligned_cols=257 Identities=27% Similarity=0.427 Sum_probs=199.6
Q ss_pred CCCCCeeeecCCeEEEEEEECC----CcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCc-----
Q 013238 124 FSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE----- 193 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 193 (447)
|.+.+.||+|+||.||+|.... +..||+|.++..... .....+.+|++.++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999998642 367999998754332 233468899999999999999999998865443
Q ss_pred -ceEEEecccCCcchhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 194 -RLLVYPFMVNGSVASCLRERGQ--SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 194 -~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
.+++|||+++|+|..++..... ....+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 6899999999999998865422 223589999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHh
Q 013238 271 GLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 271 gl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
|+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||... .. .+......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~-----~~---~~~~~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV-----EN---HEIYDYLR 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----CH---HHHHHHHH
Confidence 9998654332211 111234678999999988889999999999999999999 88888431 11 11111111
Q ss_pred hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 349 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 349 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.... ...+......+.+++.+||+.||++|||+.++++.|+..
T Consensus 230 ~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 HGNR----------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCC----------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111 111223456789999999999999999999999999863
No 147
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.1e-39 Score=306.37 Aligned_cols=253 Identities=26% Similarity=0.363 Sum_probs=199.2
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+|+..++||+|+||.||++... +++.||+|.+...... .....+.+|+.+++.++|+||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4777889999999999999875 6889999999654322 223456789999999999999999999998889999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++|+|..++.... ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 999999998886532 23489999999999999999999999 9999999999999999999999999999765322
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
. ......|+..|+|||++.+..++.++||||||+++|||++|+.||.... .......+......
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~-----~~~~~~~~~~~~~~--------- 219 (285)
T cd05605 156 E--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK-----EKVKREEVERRVKE--------- 219 (285)
T ss_pred C--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc-----hhhHHHHHHHHhhh---------
Confidence 1 1223458899999999998889999999999999999999999996311 11111111111100
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVRM 397 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 397 (447)
............+.+++.+||+.||.+|| ++.++++.
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 220 -DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00112223456688999999999999999 77777554
No 148
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-40 Score=302.89 Aligned_cols=261 Identities=24% Similarity=0.277 Sum_probs=207.2
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
..++|+..+.||+|.-|+||++.+.+ +..+|+|++.+.... ....+.+.|-++|+.++||.++.|++.+..+...++
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 34566777889999999999999874 689999999766433 223467789999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+||||+||+|..+++.+... .+++..++.++..|+-||+|||-. |||+|||||+||||.++|++.|+||.|+...
T Consensus 155 ~meyCpGGdL~~LrqkQp~~--~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGK--RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EEecCCCccHHHHHhhCCCC--ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 99999999999998875443 499999999999999999999999 9999999999999999999999999987543
Q ss_pred CCC---------------------------------CC----------------------ceeeccccccCccccccccC
Q 013238 277 DYK---------------------------------DT----------------------HVTTAVRGTIGHIAPEYLST 301 (447)
Q Consensus 277 ~~~---------------------------------~~----------------------~~~~~~~gt~~y~aPE~~~~ 301 (447)
... .. ......+||-.|+|||++.+
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 110 00 01123458999999999999
Q ss_pred CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHcc
Q 013238 302 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCT 381 (447)
Q Consensus 302 ~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl 381 (447)
...+.++|+|+|||++|||+.|..||.... ....+. .++...+.-.........+.+||.+.|
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~----~~~Tl~-------------NIv~~~l~Fp~~~~vs~~akDLIr~LL 372 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSN----NKETLR-------------NIVGQPLKFPEEPEVSSAAKDLIRKLL 372 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCC----chhhHH-------------HHhcCCCcCCCCCcchhHHHHHHHHHh
Confidence 999999999999999999999999996422 222222 222222222222245567889999999
Q ss_pred CCCCCCCCC----HHHHHH--HHhcCC
Q 013238 382 QGSPMERPK----MSEVVR--MLEGDG 402 (447)
Q Consensus 382 ~~dP~~RPt----~~evl~--~L~~~~ 402 (447)
.+||++|.. +.||-+ ++++..
T Consensus 373 vKdP~kRlg~~rGA~eIK~HpFF~gVn 399 (459)
T KOG0610|consen 373 VKDPSKRLGSKRGAAEIKRHPFFEGVN 399 (459)
T ss_pred ccChhhhhccccchHHhhcCccccCCC
Confidence 999999998 555544 344443
No 149
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.6e-39 Score=302.04 Aligned_cols=251 Identities=25% Similarity=0.355 Sum_probs=202.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|++|.||++... +++.|++|.+.... .......+..|+++++.++|+|++++++++...+..+++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677789999999999999875 68899999986432 233445688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++.... ...+++..++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999997642 23589999999999999999999999 99999999999999999999999999988654332
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.. .....|+..|+|||++.+..++.++||||||+++|+|++|+.||.... ...........
T Consensus 156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~---------- 216 (256)
T cd08529 156 NF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--------QGALILKIIRG---------- 216 (256)
T ss_pred ch-hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcC----------
Confidence 22 223457889999999999899999999999999999999999995321 11111111110
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
............+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 217 VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0111122345678999999999999999999999863
No 150
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.2e-39 Score=311.11 Aligned_cols=244 Identities=25% Similarity=0.314 Sum_probs=190.4
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||.||++... +++.||+|++...... .....+..|..++.++ +|+||+.+++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999875 5789999999764322 2234577888888877 599999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..++.++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (327)
T cd05617 81 GDLMFHMQRQR----KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DT 152 (327)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cc
Confidence 99998886542 489999999999999999999999 99999999999999999999999999987532211 22
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......++..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~---------- 220 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITD--NPDMNTEDYLFQVILEKPI---------- 220 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCC--CcccccHHHHHHHHHhCCC----------
Confidence 2345689999999999999999999999999999999999999963211 1111112222222111110
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~ 391 (447)
..+......+.+++.+||+.||.+|+++
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 0111223457889999999999999985
No 151
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.4e-39 Score=312.60 Aligned_cols=238 Identities=28% Similarity=0.388 Sum_probs=189.3
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||+||+|+.. +++.||||++..... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999976 588999999975432 22334566788888766 699999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..++.++.|++.||+|||++ +++||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~~~~----~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~ 152 (320)
T cd05590 81 GDLMFHIQKSR----RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KT 152 (320)
T ss_pred chHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cc
Confidence 99999886543 388999999999999999999999 99999999999999999999999999987543222 22
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~--------~~~~~~~i~~~~---------~-- 213 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILNDE---------V-- 213 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHhcCC---------C--
Confidence 233468999999999999899999999999999999999999995321 111112211110 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMS 392 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 392 (447)
..+......+.+++.+||+.||.+||++.
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 01112345688999999999999999983
No 152
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=9.2e-40 Score=306.18 Aligned_cols=255 Identities=27% Similarity=0.445 Sum_probs=201.3
Q ss_pred CCCCCCeeeecCCeEEEEEEECC-C---cEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTD-G---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+|+..+.||+|+||.||+|.... + ..||||.+...........+..|+.+++.++||||+++.+++......+++|
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778899999999999998753 3 3699999876544444567899999999999999999999999888999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+++|.+++..... .+++..++.++.|++.||+|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 85 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 85 EFMENGALDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred ecCCCCcHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 99999999999876432 388999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCce--eeccc--cccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 279 KDTHV--TTAVR--GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 279 ~~~~~--~~~~~--gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
..... ..... .+..|+|||.+.+..++.++||||||+++|||++ |..||.... ......++. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-----~~~~~~~i~---~~~-- 228 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----NQDVINAIE---QDY-- 228 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC-----HHHHHHHHH---cCC--
Confidence 22111 11111 2357999999998899999999999999999886 999985311 111111111 110
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
........+..+.+++.+||+.+|.+||++.+++..|+..
T Consensus 229 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 --------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0011122345688999999999999999999999998863
No 153
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.8e-39 Score=310.33 Aligned_cols=242 Identities=24% Similarity=0.338 Sum_probs=191.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCC-ceeeEeeeeecCCcceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHR-NLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 198 (447)
+|+..+.||+|+||.||+|... +++.||||++..... ......+..|.+++..+.|+ +|+.+++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999876 578999999975432 22334577888899888765 5788888888888999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|..++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQVG----KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 9999999999886543 378999999999999999999999 999999999999999999999999999875322
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
... ......||..|+|||++.+..++.++|||||||++|||+||+.||.... ..+.........
T Consensus 154 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~~~~------- 217 (324)
T cd05587 154 GGK-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--------EDELFQSIMEHN------- 217 (324)
T ss_pred CCC-ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC-------
Confidence 222 2233468999999999999999999999999999999999999995311 111111111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 391 (447)
...+......+.+++.+||+.||.+|++.
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ----VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 01111234568899999999999999986
No 154
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.5e-40 Score=316.22 Aligned_cols=267 Identities=27% Similarity=0.394 Sum_probs=207.9
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC--------CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeee
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFC 188 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 188 (447)
++...+|++.+.||+|+||.||++... .+..||+|.++..........+.+|++++.++ +|+||+++++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 444567889999999999999999742 12368999887554444455788999999999 799999999999
Q ss_pred ecCCcceEEEecccCCcchhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 013238 189 MTPTERLLVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAAN 256 (447)
Q Consensus 189 ~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~N 256 (447)
......+++|||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 164 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARN 164 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccce
Confidence 998899999999999999999876421 223488999999999999999999999 99999999999
Q ss_pred EEECCCCcEEEeecCCccccCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccC
Q 013238 257 ILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAN 334 (447)
Q Consensus 257 ill~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~ 334 (447)
||++.++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~---- 240 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI---- 240 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC----
Confidence 999999999999999997654322111 111224567999999999999999999999999999998 88888421
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCch
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAE 405 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 405 (447)
...++........ ...........+.+++.+||+.+|.+|||+.++++.|+.+....
T Consensus 241 ----~~~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 241 ----PVEELFKLLKEGH----------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred ----CHHHHHHHHHcCC----------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1222222221111 11111223456889999999999999999999999998765433
No 155
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.3e-39 Score=300.20 Aligned_cols=249 Identities=27% Similarity=0.417 Sum_probs=198.3
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcch
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA 207 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 207 (447)
++||+|++|.||++...+++.||+|.+...........+.+|+++++.+.|+||+++++++......+++|||+.+++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999987789999999876544434557889999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee-ec
Q 013238 208 SCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TA 286 (447)
Q Consensus 208 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~-~~ 286 (447)
+++..... .+++..+..++.+++.||+|||++ +++||||+|+||+++.++.++|+|||++........... ..
T Consensus 81 ~~l~~~~~---~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKKKN---RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 99865432 478999999999999999999999 999999999999999999999999999876432111111 11
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCC
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNY 365 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 365 (447)
..++..|+|||.+.+..++.++||||||+++|||+| |..||.... ........ .. ......
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~--------~~~~~~~~-~~---------~~~~~~ 216 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS--------NQQTRERI-ES---------GYRMPA 216 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC--------HHHHHHHH-hc---------CCCCCC
Confidence 223567999999988899999999999999999999 888884311 01111111 00 001111
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 366 IEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 366 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
+......+.+++.+||+.+|.+|||+.+|++.|+.
T Consensus 217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 22334579999999999999999999999999863
No 156
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.7e-39 Score=316.47 Aligned_cols=262 Identities=21% Similarity=0.287 Sum_probs=201.4
Q ss_pred HHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeec
Q 013238 114 LRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMT 190 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 190 (447)
+.++....++|+..+.||+|+||.||++... +++.+|+|.+..... ......+.+|..+++.++||||+++++.+.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455667789999999999999999999976 588999999864321 2223457789999999999999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
....++||||+++|+|.+++... .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999998653 278888999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccCC----CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
|+++..............||+.|+|||++.+. .++.++|||||||++|||++|+.||.... .......
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~ 258 (371)
T cd05622 187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSK 258 (371)
T ss_pred CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC--------HHHHHHH
Confidence 99987643332223345699999999998654 37889999999999999999999996321 1111111
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPME--RPKMSEVVRML 398 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~L 398 (447)
.........+ .........+.+++..|++.++.. |+++.++++..
T Consensus 259 i~~~~~~~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 259 IMNHKNSLTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHcCCCcccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111110000 011123455778889999844432 67888887754
No 157
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=9.3e-40 Score=306.34 Aligned_cols=260 Identities=22% Similarity=0.337 Sum_probs=203.6
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
..++|...+.||+|+||.||+|...+ ...|+||.............+.+|+.+++.+.|+||+++++++.+ ...+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 34568888999999999999998643 246899988765444445578899999999999999999998865 5578
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
++|||+++|+|.+++.... ..+++..++.++.+++.||+|||+. +++|+||||+||+++.++.++|+|||+++.
T Consensus 83 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 83 IVMELAPLGELRSYLQVNK---YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEcCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 9999999999999997543 2489999999999999999999999 999999999999999999999999999886
Q ss_pred cCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 276 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 276 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.............++..|+|||.+....++.++||||||+++|||++ |..||.... ...... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~~~~~---~~~~~~~~- 227 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK-----NNDVIG---RIENGERL- 227 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC-----HHHHHH---HHHcCCcC-
Confidence 54332222222234568999999988889999999999999999986 999995321 111111 11111100
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCc
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLA 404 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 404 (447)
.........+.+++.+||..+|.+|||+.+++..|+....+
T Consensus 228 ---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 ---------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11122345688999999999999999999999999875443
No 158
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.5e-39 Score=319.19 Aligned_cols=262 Identities=23% Similarity=0.314 Sum_probs=196.4
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----cce
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERL 195 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 195 (447)
+|+..+.||+|+||.||++... +|+.||||++..... ......+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999975 689999999864322 223446789999999999999999999988766 689
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
+||||+. ++|...+... ..+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP----QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999996 5777777543 2489999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 276 MDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 276 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.............++..|+|||++.+. .++.++|||||||++|||++|+.||..... ......+..........
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~g~~~~~ 227 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP-----IQQLDLITDLLGTPSLE 227 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHHHcCCCCHH
Confidence 543333333334578899999998774 478999999999999999999999964211 11111111110000000
Q ss_pred c-----------ccccccCC-------CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 355 Q-----------LVDSDMEG-------NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 355 ~-----------~~d~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. +....... .........+.+++.+||+.||.+|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 228 AMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 00000000 0111224568899999999999999999999874
No 159
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.7e-40 Score=315.26 Aligned_cols=243 Identities=23% Similarity=0.279 Sum_probs=193.1
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+.||+|+||.||++... +|+.||+|.+..... ......+..|++++..++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 689999999975432 222345678999999999999999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
+|..++.... .+++..++.++.||+.||+|||+ . +|+||||||+|||+++++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (325)
T cd05594 81 ELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-AT 152 (325)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cc
Confidence 9998886543 48999999999999999999997 6 99999999999999999999999999987532221 12
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||..|+|||++.+..++.++|||||||++|||++|+.||.... ........... ...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~--------~~~~~~~i~~~-------~~~~-- 215 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILME-------EIRF-- 215 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC--------HHHHHHHHhcC-------CCCC--
Confidence 233458999999999999999999999999999999999999995311 11111111100 0001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVRM 397 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 397 (447)
+......+.+++.+||+.||.+|+ ++.++++.
T Consensus 216 --p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 --PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred --CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 112235688899999999999997 88888754
No 160
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=298.89 Aligned_cols=264 Identities=23% Similarity=0.330 Sum_probs=200.1
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecc-ccccchHHHHHHHHHHHHhcCCCceeeEeeeeec-----CC
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKE-ERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-----PT 192 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 192 (447)
....|...+.||+|++|.|+.+... +|+.||||++.. .......++-.+|+..++.++|+||+.+.+++.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456666788999999999999876 689999999973 2334445577899999999999999999998765 24
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..|+|+|+| +.+|...++... .++......++.|+++||+|+|+. +|+||||||+|+|++.++.+||+|||+
T Consensus 100 DvYiV~elM-etDL~~iik~~~----~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQ----DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCc----cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 679999999 668998887643 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC-CCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 273 AKLMDYK-DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 273 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
|+..... .....+..+.|.+|.|||++.. ..|+.+.||||.|||+.||++|+..|.+.+ .....+.+...+..
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d-----~v~Ql~lI~~~lGt 246 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD-----YVHQLQLILELLGT 246 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc-----hHHHHHHHHHhcCC
Confidence 9977532 1223345568999999998754 579999999999999999999999995321 11122221111111
Q ss_pred c---ccccc--------ccc-ccCCC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 351 K---KLEQL--------VDS-DMEGN-----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 351 ~---~~~~~--------~d~-~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
. .+..+ +.. ..... ..+......++++.+||..||.+|+|++|.++
T Consensus 247 P~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 247 PSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred CCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1 01111 100 00000 01123355789999999999999999999886
No 161
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.3e-39 Score=301.59 Aligned_cols=251 Identities=32% Similarity=0.482 Sum_probs=203.2
Q ss_pred CeeeecCCeEEEEEEECC----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||.||+|.... +..+++|.+...........+.+|++.+..++|+|++++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998763 7889999997665444456788999999999999999999999998899999999999
Q ss_pred CcchhhhhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 204 GSVASCLRERGQS-----QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 204 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
++|.+++...... ...+++..++.++.|++.||+|||++ +++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875221 24589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 279 KDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 279 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
... .......++..|+|||.+.+..++.++||||||+++|||++ |..||... ...+.........
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~~~----- 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--------SNEEVLEYLRKGY----- 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHHcCC-----
Confidence 321 11223447889999999988889999999999999999999 69998532 1111112211110
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
...........+.+++.+||+.+|.+|||+.++++.|+
T Consensus 225 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 -----RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11112223567899999999999999999999999874
No 162
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1e-39 Score=325.91 Aligned_cols=260 Identities=21% Similarity=0.306 Sum_probs=190.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--------
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-------- 191 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 191 (447)
..+|+..+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++|+||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 457889999999999999999875 58899999885432 1345799999999999999998876432
Q ss_pred CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC-cEEEeec
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDF 270 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Df 270 (447)
...++||||+++ +|.+++.........+++..++.++.||+.||+|||++ +|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 135689999964 77777765433344689999999999999999999999 999999999999999665 7999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 349 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
|+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|..||.... ....+...+. ...
T Consensus 216 Gla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~----~~~~~~~i~~-~~~ 288 (440)
T PTZ00036 216 GSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS----SVDQLVRIIQ-VLG 288 (440)
T ss_pred ccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHH-HhC
Confidence 99986543221 2234578999999998664 68999999999999999999999995321 0011111111 000
Q ss_pred ccccc----------c-----ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 EKKLE----------Q-----LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 ~~~~~----------~-----~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..... . +....+....+......+.+++.+||+.||.+|||+.++++
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00000 0 00000000011123456889999999999999999999885
No 163
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.8e-39 Score=311.31 Aligned_cols=248 Identities=23% Similarity=0.277 Sum_probs=191.1
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHH-HHHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEV-EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||+||+|... +++.||+|++..... ......+..|. .+++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999976 578899999965322 11222344444 356788999999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+.+..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~ 152 (325)
T cd05602 81 GELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GT 152 (325)
T ss_pred CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CC
Confidence 99999887543 377888889999999999999999 99999999999999999999999999987532222 12
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~---------~-- 213 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKP---------L-- 213 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCC---------c--
Confidence 234468999999999999999999999999999999999999995311 111111111110 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
.........+.+++.+||+.+|.+||++.+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~ 252 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHI 252 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence 011123456888999999999999999886555444433
No 164
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-39 Score=308.05 Aligned_cols=264 Identities=26% Similarity=0.389 Sum_probs=203.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-----CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--Ccc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 194 (447)
..|...+.||+|+||.||++.+. ++..||+|.++..........+.+|+++++.++|+|++++.+++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 34677889999999999999742 47889999997654444455789999999999999999999998775 567
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
+++|||+++++|.+++.... ..+++..++.++.+++.||+|||++ +++||||||+||+++.++.++|+|||++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 89999999999999986542 2489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccccccc-------CCCcccHHHHHH
Q 013238 275 LMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA-------NDDDVMLLDWVK 345 (447)
Q Consensus 275 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~ 345 (447)
........ ......++..|+|||++.+..++.++||||||+++|||+|++.|....... .........++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 65433221 112334677899999998888999999999999999999987765321000 000111111111
Q ss_pred HHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.. .... ...........+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 238 ~~-~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VL-EEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HH-HcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11 1110 0011122456799999999999999999999999999864
No 165
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.6e-39 Score=305.96 Aligned_cols=250 Identities=24% Similarity=0.323 Sum_probs=195.1
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
||+|+||.||++... +|+.||+|.+...... .....+..|++++++++||||+++.+++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999875 5899999999643221 2233456799999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeec
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 286 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 286 (447)
..++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++...... .....
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~ 153 (277)
T cd05607 81 KYHIYNVGE--RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQ 153 (277)
T ss_pred HHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeec
Confidence 988865432 3488999999999999999999999 9999999999999999999999999998765432 22233
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
..|+..|+|||++.+..++.++|||||||++|||++|+.||.... ............... .... ..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~---------~~~~-~~ 219 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK----EKVAKEELKRRTLED---------EVKF-EH 219 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc----chhhHHHHHHHhhcc---------cccc-cc
Confidence 458999999999998889999999999999999999999995311 111111111111111 0000 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
......+.+++.+||+.||.+||++.|+++.+..
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~ 253 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDPRK 253 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence 1234568899999999999999999887755544
No 166
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.4e-39 Score=306.99 Aligned_cols=241 Identities=24% Similarity=0.337 Sum_probs=189.2
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHh-cCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||+||+|... +++.||||.++.... ......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 478999999975431 2223345667777765 5899999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++....... .
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 152 (316)
T cd05619 81 GDLMFHIQSCH----KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-K 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-c
Confidence 99999987532 388999999999999999999999 999999999999999999999999999875322221 2
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||..|+|||++.+..++.++|||||||++|||++|+.||.... ..+........ ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~i~~~-------~~~--- 214 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD--------EEELFQSIRMD-------NPC--- 214 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhC-------CCC---
Confidence 233468999999999999899999999999999999999999995321 11111111100 011
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMS-EVV 395 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl 395 (447)
.+......+.+++.+||+.||.+||++. ++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 -YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1112334578899999999999999997 443
No 167
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-39 Score=302.46 Aligned_cols=251 Identities=17% Similarity=0.282 Sum_probs=201.7
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
+|+..+.||+|+||.||++... +++.+|+|.++..........+..|+.+++.++|+|++++.+.+...+..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677889999999999999876 688999999865444444556788999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++++|.+++.... ...+++..++.++.+++.||.|||++ +++|+||||+||++++++.++++|||++........
T Consensus 81 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 9999999886532 23478999999999999999999999 999999999999999999999999999876543221
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
......++..|+|||++.+..++.++|+||||+++|+|++|..||.... .......... ....
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~------- 218 (255)
T cd08219 156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS--------WKNLILKVCQ-GSYK------- 218 (255)
T ss_pred -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC--------HHHHHHHHhc-CCCC-------
Confidence 2223458889999999998889999999999999999999999995311 1111111111 1100
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.........+.+++.+||+.||.+|||+.+++..
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 --PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1112233568899999999999999999999864
No 168
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.7e-39 Score=303.79 Aligned_cols=253 Identities=24% Similarity=0.361 Sum_probs=198.3
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
+|+..+.||+|+||.||+|... +++.||+|.+...........+.+|++++++++||||+++++++...+..+++|||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5777889999999999999864 688999999865543444456889999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++++|..+. .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 82 DGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred CCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 999986542 267888999999999999999999 99999999999999999999999999997653221
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||....... .......+........ ...+
T Consensus 150 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~------~~~~ 220 (279)
T cd06619 150 --AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQ-GSLMPLQLLQCIVDED------PPVL 220 (279)
T ss_pred --ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccc-cccchHHHHHHHhccC------CCCC
Confidence 223458899999999999899999999999999999999999996421110 0111111111111100 0011
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
. .......+.+++.+||+.+|.+||+++++++.-.
T Consensus 221 ~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 221 P---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred C---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 0 1112345889999999999999999999987543
No 169
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.3e-39 Score=304.43 Aligned_cols=259 Identities=27% Similarity=0.417 Sum_probs=203.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
++|+..+.||+|+||.||+|+.. +.+.+++|.+...........+.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888899999999999999864 246799998865443334457889999999999999999999999888999
Q ss_pred EEEecccCCcchhhhhhcCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 196 LVYPFMVNGSVASCLRERGQSQ-----PPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~-----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
+||||+++|+|.+++....... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997654221 2589999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhh
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLK 349 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
|++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||.... . ...+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~-----~---~~~~~~~~- 232 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS-----D---EEVLNRLQ- 232 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----h---HHHHHHHH-
Confidence 9987543222222233346778999999988888999999999999999999 788884211 1 11111111
Q ss_pred ccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 350 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 350 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..... ..........+.+++.+||+.+|.+|||+.+++..|.+
T Consensus 233 ~~~~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 233 AGKLE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred cCCcC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 01110 01112234578999999999999999999999998863
No 170
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5e-40 Score=323.04 Aligned_cols=253 Identities=17% Similarity=0.236 Sum_probs=194.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|+||+||++... +++.||||.+..... ......+.+|++++..++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888899999999999999875 688999999865321 222346788999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIKYD----TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999987543 488999999999999999999999 999999999999999999999999999863211
Q ss_pred CCCc----------------------------------------------eeeccccccCccccccccCCCCCchhhhHH
Q 013238 279 KDTH----------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFG 312 (447)
Q Consensus 279 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS 312 (447)
.... ......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 0000 001235899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCC---C
Q 013238 313 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMER---P 389 (447)
Q Consensus 313 lG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---P 389 (447)
|||++|||++|..||.... ..+............. +.. .......+.+++.+|+. +|.+| +
T Consensus 234 lGvil~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~~-----~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 234 LGAIMFECLIGWPPFCSEN--------SHETYRKIINWRETLY-----FPD--DIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred cchhhhhhhcCCCCCCCCC--------HHHHHHHHHccCCccC-----CCC--CCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 9999999999999995311 0111111111000000 000 01123457788888987 67665 5
Q ss_pred CHHHHHHH
Q 013238 390 KMSEVVRM 397 (447)
Q Consensus 390 t~~evl~~ 397 (447)
|+.++++.
T Consensus 298 ~~~~~l~h 305 (377)
T cd05629 298 GAHEIKSH 305 (377)
T ss_pred CHHHHhcC
Confidence 88888774
No 171
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-39 Score=297.26 Aligned_cols=265 Identities=25% Similarity=0.348 Sum_probs=197.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHH--HhcCCCceeeEeeeeecC----Ccc
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMI--SMAVHRNLLRLRGFCMTP----TER 194 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l--~~l~h~niv~l~~~~~~~----~~~ 194 (447)
.....+.+.||+|.||.||+|.+. |+.||||++.... +..+.+|.+++ ..++|+||+.+++.-..+ .++
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccc----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 345677789999999999999997 7889999996432 33556666665 468999999999876544 357
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-----CCCCCceecCCCCCCEEECCCCcEEEee
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-----HCDPKIIHRDVKAANILLDEEFEAVVGD 269 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-----~~~~~ivH~dlk~~Nill~~~~~~kl~D 269 (447)
|||.+|.+.|||.++|... .++....++++..+|.||++||. +.+|.|.|||||+.||||.+++.+.|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 8999999999999999874 38899999999999999999995 3578999999999999999999999999
Q ss_pred cCCccccCCCCCc---eeeccccccCccccccccCCCC------CchhhhHHHHHHHHHHHhC----------CCCcccc
Q 013238 270 FGLAKLMDYKDTH---VTTAVRGTIGHIAPEYLSTGKS------SEKTDVFGYGVMLLELITG----------QRAFDLA 330 (447)
Q Consensus 270 fgl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~------~~~sDvwSlG~il~elltg----------~~p~~~~ 330 (447)
+|||......... .....+||.+|||||++...-. -..+||||||.|+||++.. +.||...
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 9999765433221 2345679999999999965421 3468999999999999852 2444321
Q ss_pred cccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 013238 331 RLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 402 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 402 (447)
-..+. + .+-++..+-..++...+..+ -...+.+..+.++|..||..||..|-|+-.+-+.|.++.
T Consensus 440 Vp~DP---s-~eeMrkVVCv~~~RP~ipnr---W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 440 VPSDP---S-FEEMRKVVCVQKLRPNIPNR---WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CCCCC---C-HHHHhcceeecccCCCCCcc---cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 11111 1 11111111111111111111 124578889999999999999999999998888887654
No 172
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.6e-39 Score=311.08 Aligned_cols=243 Identities=25% Similarity=0.335 Sum_probs=191.9
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
++||+|+||.||+|... +++.||+|++..... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999876 578999999975432 22233566788888765 799999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|...+.... .+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (321)
T cd05591 81 GDLMFQIQRSR----KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VT 152 (321)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cc
Confidence 99998886543 388999999999999999999999 99999999999999999999999999987543222 22
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~--------~~~~~~~i~~~~~----------- 213 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN--------EDDLFESILHDDV----------- 213 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCC-----------
Confidence 233458999999999999899999999999999999999999996321 1111222211110
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERP-------KMSEVVRM 397 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RP-------t~~evl~~ 397 (447)
..+......+.+++.+||+.||.+|| ++.++++.
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 01111235688999999999999999 67777653
No 173
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4e-39 Score=308.12 Aligned_cols=262 Identities=23% Similarity=0.342 Sum_probs=197.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|...+.||+|+||.||+|... +++.||+|.++..........+.+|++++++++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888899999999999999876 57889999997654444444677899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+ +|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDCG---NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 965 7887776543 2378899999999999999999999 99999999999999999999999999987543322
Q ss_pred CceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc---------
Q 013238 281 THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE--------- 350 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 350 (447)
. ......++..|+|||++.+ ..++.++||||||+++|||+||+.||...... ............
T Consensus 159 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 159 K-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-----DELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred c-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHhhh
Confidence 2 1222347889999998865 46789999999999999999999999532110 111111110000
Q ss_pred ---cccccccccccCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 351 ---KKLEQLVDSDMEGN----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 351 ---~~~~~~~d~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
........+..... ........+.+++.+||+.||.+|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 233 SSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred cchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000000000 00122345789999999999999999999986
No 174
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.3e-39 Score=312.84 Aligned_cols=239 Identities=26% Similarity=0.332 Sum_probs=191.7
Q ss_pred CeeeecCCeEEEEEEE----CCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEeccc
Q 013238 128 NILGRGGFGKVYKGRL----TDGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 202 (447)
+.||+|+||.||++.. .+|+.||+|++...... .....+..|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 25789999999754322 223456789999999999999999999999999999999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
+|+|.+++.... .+++..++.++.||+.||+|||++ +++||||||+|||+++++.+||+|||+++...... .
T Consensus 82 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~ 153 (318)
T cd05582 82 GGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K 153 (318)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-C
Confidence 999999986532 489999999999999999999999 99999999999999999999999999987653322 2
Q ss_pred eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 283 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.... ............ .
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~--------~~~~~~~i~~~~---------~- 215 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD--------RKETMTMILKAK---------L- 215 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC--------HHHHHHHHHcCC---------C-
Confidence 2334568999999999998889999999999999999999999995321 111111111110 0
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMSE 393 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 393 (447)
..+......+.+++.+||+.||.+|||+.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 111123456889999999999999999766
No 175
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2e-39 Score=305.77 Aligned_cols=257 Identities=25% Similarity=0.432 Sum_probs=200.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
.++...++||+|+||.||++... ++..+|+|.+.... ......+.+|+++++.++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 46777889999999999999642 35678999886432 333457889999999999999999999999988999
Q ss_pred EEEecccCCcchhhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc
Q 013238 196 LVYPFMVNGSVASCLRERGQ-----------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 264 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~ 264 (447)
++|||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++|+||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCC
Confidence 99999999999999876432 113488999999999999999999999 9999999999999999999
Q ss_pred EEEeecCCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHH
Q 013238 265 AVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 342 (447)
Q Consensus 265 ~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 342 (447)
+||+|||++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.... . .+
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~---~~ 232 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS-----N---TE 232 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC-----H---HH
Confidence 999999998755322211 1122234678999999999999999999999999999998 899984211 0 11
Q ss_pred HHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 343 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 343 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.......... ..........+.+++.+||+.||.+||++.+|++.|+.
T Consensus 233 ~~~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 233 AIECITQGRE----------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHcCcc----------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111111100 01111234568899999999999999999999999863
No 176
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.9e-39 Score=300.59 Aligned_cols=250 Identities=27% Similarity=0.406 Sum_probs=199.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeee-cCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM-TPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e 199 (447)
.++|...+.||+|+||.||++... |..+|+|.++... ....+.+|+.++++++|+|++++++++. ..+..+++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 357888899999999999999875 7789999986432 2346889999999999999999999765 4456899999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++..... ..+++..++.++.+++.||+|||++ +++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 81 YMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 9999999999876432 2488999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||... ...+........
T Consensus 156 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~--------~~~~~~~~~~~~-------- 215 (256)
T cd05082 156 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--------PLKDVVPRVEKG-------- 215 (256)
T ss_pred C----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHhcC--------
Confidence 1 12234568999999988889999999999999999998 99998531 112222211111
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
............+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 216 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 216 --YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred --CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 01111122345688999999999999999999999999853
No 177
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.8e-39 Score=300.58 Aligned_cols=252 Identities=25% Similarity=0.433 Sum_probs=200.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
.+|+..+.||+|+||.||++...++..+|+|.+..... ....+.+|+++++.++|+|++++++++......+++|||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 46777889999999999999887788999998864332 2346889999999999999999999998888999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+++|.+++..... ++++..++.++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 82 EHGCLSDYLRAQRG---KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 99999999875432 378999999999999999999999 999999999999999999999999999875532221
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ............ ....+
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~---~~~~~- 223 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS--------NSEVVETINAGF---RLYKP- 223 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHhCCC---CCCCC-
Confidence 11112234568999999998899999999999999999998 999985311 111222211110 11111
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
......+.+++.+||+.+|.+|||+.++++.|.
T Consensus 224 ------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 224 ------RLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ------CCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 112356899999999999999999999999873
No 178
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.8e-39 Score=307.34 Aligned_cols=241 Identities=24% Similarity=0.348 Sum_probs=189.0
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHh-cCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||.||+|... +|+.||+|.++.... ......+..|..++.. .+|+||+++++++.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999976 588999999975432 2223345667777765 4899999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.++|+|||+++...... ..
T Consensus 81 g~L~~~i~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (316)
T cd05620 81 GDLMFHIQDKG----RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NR 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cc
Confidence 99999886542 388999999999999999999999 99999999999999999999999999987432222 22
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||..|+|||++.+..++.++|||||||++|||++|+.||.... ........... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~--------~~~~~~~~~~~-------~~~--- 214 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--------EDELFESIRVD-------TPH--- 214 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhC-------CCC---
Confidence 334568999999999999999999999999999999999999995311 11111111110 011
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMS-EVV 395 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl 395 (447)
.+......+.+++.+||+.||.+||++. +++
T Consensus 215 -~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 -YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111334578899999999999999984 444
No 179
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.7e-39 Score=310.27 Aligned_cols=241 Identities=24% Similarity=0.303 Sum_probs=188.5
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHH-HHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||+||+|... +|+.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999976 689999999965422 112234445544 46789999999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (323)
T cd05575 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKT 152 (323)
T ss_pred CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCc
Confidence 99999886543 488999999999999999999999 9999999999999999999999999998753222 122
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......... ..+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~-------~~~~- 216 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------TAEMYDNILNKP-------LRLK- 216 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC--------HHHHHHHHHcCC-------CCCC-
Confidence 333468999999999999999999999999999999999999995311 111222211110 0011
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMSEVV 395 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 395 (447)
......+.+++.+||+.||.+||++.+.+
T Consensus 217 ---~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (323)
T cd05575 217 ---PNISVSARHLLEGLLQKDRTKRLGAKDDF 245 (323)
T ss_pred ---CCCCHHHHHHHHHHhhcCHHhCCCCCCCH
Confidence 11245688999999999999999986333
No 180
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.4e-39 Score=302.92 Aligned_cols=264 Identities=25% Similarity=0.391 Sum_probs=199.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-----CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--Ccc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 194 (447)
.+|++.+.||+|+||.||++... ++..||+|.+.... ......+.+|+++++.++|+||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 46788899999999999999742 47899999986543 23345688999999999999999999987543 467
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||++++++.+||+|||++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR---ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccc
Confidence 89999999999999986543 2389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcee--eccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccccccc-----CC--CcccHHHHHH
Q 013238 275 LMDYKDTHVT--TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA-----ND--DDVMLLDWVK 345 (447)
Q Consensus 275 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~-----~~--~~~~~~~~~~ 345 (447)
.......... ....++..|+|||++.+..++.++||||||+++|||++|..++...... .. ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 6643322111 1112345699999998888999999999999999999988775321100 00 0000000000
Q ss_pred HHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.. +...............+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 237 ~~---------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 EL---------LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HH---------HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11 111111111122345689999999999999999999999999864
No 181
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.3e-39 Score=301.25 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=198.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+.+++.++|+||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 457889999999999999999974 688999999864422 223457789999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++.... ++++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 87 YCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 999999999886532 488999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCceeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.. ......++..|+|||.+. ...++.++||||||+++|||++|+.||....... .... ......
T Consensus 160 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~-----------~~~~-~~~~~~ 226 (267)
T cd06646 160 IA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-----------ALFL-MSKSNF 226 (267)
T ss_pred cc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh-----------hhee-eecCCC
Confidence 21 122335788999999874 3457889999999999999999999984311000 0000 000000
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
..+.. .........+.+++.+||+.+|++|||++++++.|
T Consensus 227 ~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 QPPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00000 01112345788999999999999999999998754
No 182
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.8e-39 Score=319.65 Aligned_cols=200 Identities=25% Similarity=0.358 Sum_probs=170.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+|+..++||+|+||+||+|... +++.||+|.+..... ......+.+|+++++.++|+||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999875 588999999965322 2233467889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 999999999987643 378899999999999999999999 9999999999999999999999999997532110
Q ss_pred CC----------------------------------------------ceeeccccccCccccccccCCCCCchhhhHHH
Q 013238 280 DT----------------------------------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 313 (447)
Q Consensus 280 ~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSl 313 (447)
.. .......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 00 00112458999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccc
Q 013238 314 GVMLLELITGQRAFDL 329 (447)
Q Consensus 314 G~il~elltg~~p~~~ 329 (447)
||++|||++|+.||..
T Consensus 235 Gvil~elltG~~Pf~~ 250 (382)
T cd05625 235 GVILYEMLVGQPPFLA 250 (382)
T ss_pred hHHHHHHHhCCCCCCC
Confidence 9999999999999953
No 183
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.3e-39 Score=313.33 Aligned_cols=242 Identities=24% Similarity=0.332 Sum_probs=191.1
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+|+..+.||+|+||.||+|... +++.||+|.+..... ......+..|..++..+ .|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777899999999999999876 578999999975432 12223456677777766 5899999999999989999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|...+.... .+++..++.++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQVG----RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 9999999998886543 388999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.. .......||+.|+|||++.+..++.++|||||||++|||+||+.||.... ............
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~--------~~~~~~~i~~~~------- 217 (323)
T cd05616 154 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN------- 217 (323)
T ss_pred CC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-------
Confidence 22 22234568999999999999999999999999999999999999996321 111111111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 391 (447)
...+......+.+++.+|++.+|.+|++.
T Consensus 218 ----~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 ----VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ----CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 01112234568899999999999999985
No 184
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7e-39 Score=300.23 Aligned_cols=255 Identities=26% Similarity=0.396 Sum_probs=191.5
Q ss_pred CeeeecCCeEEEEEEECC---CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCC
Q 013238 128 NILGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+.||+|+||.||+|...+ +..+|+|.++..........+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 45799999876554444457888999999999999999999999888999999999999
Q ss_pred cchhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 205 SVASCLRERGQS-QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 205 sL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
+|.+++...... ....++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 999999764321 22467788889999999999999999 99999999999999999999999999987543222111
Q ss_pred -eeccccccCccccccccCC-------CCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 284 -TTAVRGTIGHIAPEYLSTG-------KSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 284 -~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||.... ....... ... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-----~~~~~~~---~~~-~~~~ 228 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLS-----DEQVLTY---TVR-EQQL 228 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHH---Hhh-cccC
Confidence 1223467889999998643 35789999999999999996 999995321 0111110 011 0111
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
...++.+. ......+.+++..|| .+|++|||+++|+..|+
T Consensus 229 ~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111111 112345778899999 58999999999999875
No 185
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3e-39 Score=335.80 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=201.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..++||+|+||.||+|... +|+.||+|++..... ......+.+|+++++.++||||+++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47888999999999999999876 589999999975432 223456889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 199 PFMVNGSVASCLRERGQ-------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
||+++|+|.+++..... .....++..++.++.||++||+|||++ +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999865311 122366778899999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC-----------------ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccC
Q 013238 272 LAKLMDYKDT-----------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 334 (447)
Q Consensus 272 l~~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~ 334 (447)
+++....... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 9986521110 011224589999999999999999999999999999999999999953110
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhc
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-KMSEVVRMLEG 400 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~ 400 (447)
.... ... .+.++. ........+..+.+++.+||+.||.+|| +++++++.|+.
T Consensus 237 ---~ki~-------~~~---~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 237 ---RKIS-------YRD---VILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred ---hhhh-------hhh---hccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000 000 000000 0001122345688899999999999996 56777777665
No 186
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.5e-39 Score=300.06 Aligned_cols=249 Identities=30% Similarity=0.432 Sum_probs=198.8
Q ss_pred CeeeecCCeEEEEEEECC--C--cEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLTD--G--SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|++|.||+|.+.+ + ..||||.+...........+.+|+.++++++|+||+++++++.. ...+++|||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998643 3 36899999776544445578899999999999999999999888 888999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc-
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH- 282 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~- 282 (447)
++|.+++..... ..+++..++.++.|++.||+|||++ +++|+||+|+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999977542 3589999999999999999999999 9999999999999999999999999999876432221
Q ss_pred -eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 283 -VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 283 -~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
......++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+......... .
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--------~~~~~~~~~~~~~--~------ 218 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL--------SGSQILKKIDKEG--E------ 218 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHhcC--C------
Confidence 1112346788999999998899999999999999999999 99998531 1111111111100 0
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
........+..+.+++.+||+.+|.+|||+.++++.|.
T Consensus 219 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 -RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00111223466889999999999999999999999885
No 187
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.5e-39 Score=303.65 Aligned_cols=252 Identities=25% Similarity=0.379 Sum_probs=195.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecC------
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTP------ 191 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------ 191 (447)
+++.|+..+.||+|+||.||+|... +++.||+|.+.... .....+..|+.++.++ +|+|++++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 5667888899999999999999875 58899999986532 2334678899999888 699999999998753
Q ss_pred CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
...+++|||+.+++|.+++..... ..+++..++.++.|++.||+|||++ +++|+||||+||++++++.++|+|||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 357899999999999999876432 3488999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
++........ ......|+..|+|||++. +..++.++|||||||++|||++|+.||..... ..... .
T Consensus 157 ~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-------~~~~~-~ 227 (272)
T cd06637 157 VSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRALF-L 227 (272)
T ss_pred Cceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-------HHHHH-H
Confidence 9976543222 223345888999999986 33578899999999999999999999953110 00000 0
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
. .... .... ........+.+++.+||+.+|.+|||+.++++
T Consensus 228 ~-~~~~-----~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 228 I-PRNP-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred H-hcCC-----CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 0000 0011 11123356889999999999999999999875
No 188
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-39 Score=319.76 Aligned_cols=252 Identities=20% Similarity=0.266 Sum_probs=193.4
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+|++.+.||+|+||.||+++.. +++.||||.+..... ......+.+|++++..++|+||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999875 588999999864321 2223457889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++..+...
T Consensus 82 ~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 82 YIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 999999999997643 378899999999999999999999 9999999999999999999999999997532110
Q ss_pred CC------------------------------------------ceeeccccccCccccccccCCCCCchhhhHHHHHHH
Q 013238 280 DT------------------------------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML 317 (447)
Q Consensus 280 ~~------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il 317 (447)
.. .......||+.|+|||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 00 001124689999999999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCC---CHHHH
Q 013238 318 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP---KMSEV 394 (447)
Q Consensus 318 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---t~~ev 394 (447)
|||++|+.||.... ..+.......... .............+.+++.+|+ .+|.+|+ |+.++
T Consensus 235 yell~G~~Pf~~~~--------~~~~~~~i~~~~~-------~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 235 YEMLVGQPPFLADT--------PAETQLKVINWET-------TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred eehhhCCCCCCCCC--------HHHHHHHHhccCc-------cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999996321 1111111111000 0000001112334566666665 4999999 78888
Q ss_pred HHH
Q 013238 395 VRM 397 (447)
Q Consensus 395 l~~ 397 (447)
++.
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 764
No 189
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=321.91 Aligned_cols=248 Identities=26% Similarity=0.387 Sum_probs=205.6
Q ss_pred CCCCCeeeecCCeEEEEEEEC--CCc--EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 124 FSNRNILGRGGFGKVYKGRLT--DGS--LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
....++||+|.||.|++|.++ +|+ .||||.++..........|.+|+..|.+++|+|+++|+|+..+ ....||||
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 344578999999999999876 344 6899999877655556689999999999999999999999877 67889999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
.++.|+|.+.|+. .....|.......++.|||.||.||.++ ++|||||..+|+||-....+||+||||.+.+...
T Consensus 191 LaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 9999999999988 3344688999999999999999999999 9999999999999999999999999999987654
Q ss_pred CCce--eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 280 DTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
+... .....-...|+|||.+....++-++|||+|||+||||+| |..||-.. .-.+ +-+.
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~--------~g~q----------IL~~ 327 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC--------RGIQ----------ILKN 327 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC--------CHHH----------HHHh
Confidence 4332 222335678999999999999999999999999999999 88888431 1111 1222
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVV 395 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 395 (447)
+|..-.-..+..+.++++++|+.||..+|.+|||+..+.
T Consensus 328 iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 328 IDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred ccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 333333345667889999999999999999999999997
No 190
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.9e-39 Score=299.97 Aligned_cols=250 Identities=32% Similarity=0.441 Sum_probs=191.7
Q ss_pred CeeeecCCeEEEEEEEC----CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeec-CCcceEEEeccc
Q 013238 128 NILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYPFMV 202 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~ 202 (447)
+.||+|+||.||+|... ++..+|+|.+...........+.+|+.+++.++|||++++++++.. .+..+++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999998654333344568889999999999999999998764 456789999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
+|+|.+++..... ...+..+..++.+++.||+|||+. +++||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSETH---NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 9999999975432 267788889999999999999999 9999999999999999999999999999754322111
Q ss_pred ---eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhC-CCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 283 ---VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG-QRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 283 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
......++..|+|||.+.+..++.++||||||+++|||++| ..||... ...+..........
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--------~~~~~~~~~~~~~~------ 220 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------DSFDITVYLLQGRR------ 220 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC--------CHHHHHHHHhcCCC------
Confidence 11122356789999999888999999999999999999995 4555321 11222222211110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.......+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 221 ----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 221 ----LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred ----CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 001112235688999999999999999999999999864
No 191
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1e-38 Score=300.42 Aligned_cols=249 Identities=24% Similarity=0.379 Sum_probs=202.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
..|+..+.||.|+||.||+|... ++..||+|.+...........+.+|+++++.++|+||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35677788999999999999875 58899999987554444455788999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++... ++++..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 84 LGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 9999999988642 378899999999999999999999 99999999999999999999999999997654322
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
. ......++..|+|||++.+..++.++|+||||+++|||++|+.||..... ..... .+...
T Consensus 156 ~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~--------~~~~~----------~~~~~ 216 (277)
T cd06640 156 I-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP--------MRVLF----------LIPKN 216 (277)
T ss_pred c-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh--------HhHhh----------hhhcC
Confidence 1 12233578899999999888899999999999999999999999853210 00000 00111
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
............+.+++.+||+.+|.+||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 217 NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1122334456778999999999999999999999875
No 192
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.3e-39 Score=307.81 Aligned_cols=256 Identities=26% Similarity=0.431 Sum_probs=199.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCc----EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
.++|+..+.||+|+||.||+|... +|. .+|+|.+...........+.+|+.+++.++|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356778889999999999999864 343 57899887654444445688899999999999999999998754 467
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
++++|+++|+|.+++..... .+++..++.++.|++.||.|||++ +++|+||||+||++++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKD---NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeehhcCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 99999999999999875432 378999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCce-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 276 MDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 276 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
........ .....++..|+|||++.+..++.++||||||+++|||++ |..||.... .....+++. ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-----~~~~~~~~~----~~~~ 229 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-----TREIPDLLE----KGER 229 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHH----CCCC
Confidence 54322211 112235678999999998899999999999999999997 899985311 111111111 1100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
......+...+.+++..||..+|.+||++.++++.|+.+
T Consensus 230 ---------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 230 ---------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 001112335688999999999999999999999999964
No 193
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5e-39 Score=302.03 Aligned_cols=249 Identities=26% Similarity=0.402 Sum_probs=201.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||.|++|.||+|... +++.+|+|.+...........+.+|+++++.++|+|++++.+++.+....++++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36778889999999999999976 58899999987654344445688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++... ++++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999998753 489999999999999999999999 99999999999999999999999999998765332
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
. ......++..|+|||++.+..++.++||||||+++|+|+||+.||..... ......... ... +.
T Consensus 153 ~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--------~~~~~~~~~-~~~-----~~ 217 (274)
T cd06609 153 S-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--------MRVLFLIPK-NNP-----PS 217 (274)
T ss_pred c-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--------HHHHHHhhh-cCC-----CC
Confidence 2 12233578889999999988899999999999999999999999953210 111111110 000 11
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+... .....+.+++.+||..+|++|||++++++
T Consensus 218 ~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 218 LEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred Cccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1111 13456889999999999999999999987
No 194
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9e-39 Score=308.48 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=193.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|++.+.||+|+||.||+++.. +++.||+|.+.... .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999976 58899999996432 1222345788999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 9999999999997532 2388999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCceeeccccccCccccccccC-----CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
..........||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ..+...........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~--------~~~~~~~i~~~~~~ 226 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHKEH 226 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC--------HHHHHHHHHcCCCc
Confidence 33222233458999999999863 457889999999999999999999995311 11111121111110
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQ--GSPMERPKMSEVVRM 397 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPt~~evl~~ 397 (447)
..+ . .........+.+++.+|+. .++..||++.++++.
T Consensus 227 ~~~-----~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 227 FQF-----P-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ccC-----C-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 110 0 0011123456667776664 344457888888875
No 195
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.9e-39 Score=301.82 Aligned_cols=252 Identities=30% Similarity=0.481 Sum_probs=197.2
Q ss_pred CeeeecCCeEEEEEEECC-------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 128 NILGRGGFGKVYKGRLTD-------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+.||+|+||.||+|+..+ +..+|||.+...........+.+|+++++.++||||+++++++......+++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886554334455788999999999999999999999988899999999
Q ss_pred ccCCcchhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC-----cEEEeecCC
Q 013238 201 MVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-----EAVVGDFGL 272 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfgl 272 (447)
+++++|.+++..... ....+++..++.++.+++.||+|||+. +++|+||||+||+++.++ .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999976432 123478999999999999999999999 999999999999999887 899999999
Q ss_pred ccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 273 AKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 273 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
+......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||.... . .+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~-----~---~~~~~~~~~~ 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN-----N---QEVLQHVTAG 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC-----H---HHHHHHHhcC
Confidence 8755322211 1122235678999999999999999999999999999998 999985311 1 1111111000
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 351 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 351 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
. ........+..+.+++.+||+.+|.+||+++++++.|+.
T Consensus 230 ~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 G----------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred C----------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 011122335678899999999999999999999999863
No 196
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.6e-39 Score=304.69 Aligned_cols=249 Identities=19% Similarity=0.317 Sum_probs=199.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
.+|+..+.||+|++|.||+|... +++.|++|.+...... ....+.+|+++++.+.|+|++++++.+......++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 47888899999999999999864 6889999998754433 235678899999999999999999999988899999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred cCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 9999999998643 378899999999999999999999 99999999999999999999999999987643322
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.. .....++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ...+.. ...... +
T Consensus 171 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-------~~~~~~-~~~~~~------~- 234 (296)
T cd06654 171 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYL-IATNGT------P- 234 (296)
T ss_pred cc-cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-------HHhHHH-HhcCCC------C-
Confidence 11 2223578899999999888899999999999999999999999953211 011110 000000 0
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...........+.+++.+||..+|.+|||+.++++
T Consensus 235 -~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 235 -ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 00112233456889999999999999999999997
No 197
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=9e-39 Score=305.53 Aligned_cols=263 Identities=23% Similarity=0.318 Sum_probs=200.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||+|+||.||++... ++..+|+|.+...........+.+|++++..++||||+++++++...+..+++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888899999999999999875 57889999987554333445688899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++.... .+++..+..++.|++.||.|||+.+ +++|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 81 MDGGSLDQVLKKAG----RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 99999999997642 4889999999999999999999732 8999999999999999999999999998754321
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc--------
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK-------- 352 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 352 (447)
......++..|+|||++.+..++.++||||||+++|+|++|+.||..... .....+.........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-----KELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-----hhHHHhhcCccccccccCCcccc
Confidence 12234578899999999888899999999999999999999999853211 001000000000000
Q ss_pred ----------------cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 353 ----------------LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 353 ----------------~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
...+................+.+++.+||+.+|++|||+.++++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000000011344688999999999999999999998863
No 198
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-38 Score=299.35 Aligned_cols=279 Identities=22% Similarity=0.262 Sum_probs=209.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 198 (447)
++|+..+.||.|++|.||++... +++.+|+|.+...........+.+|+++++.++|+||+++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35777889999999999999985 58899999987654444456788999999999999999999988654 3578999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999998765443344588999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||+....... ...+........ ....+.+
T Consensus 158 ~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~ 230 (287)
T cd06621 158 SLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL---GPIELLSYIVNM-PNPELKD 230 (287)
T ss_pred ccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC---ChHHHHHHHhcC-Cchhhcc
Confidence 221 123467889999999988999999999999999999999999974322111 111221111110 1111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcCCCchhhHHHHHh
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR--MLEGDGLAERWEEWQKE 413 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~~~~~~~~~~~ 413 (447)
. . .........+.+++.+||+.+|.+|||+.|+++ .+....-+..+.+.+.+
T Consensus 231 ~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~~~~~~~~~~ 284 (287)
T cd06621 231 E-P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKKKVNMAKFVA 284 (287)
T ss_pred C-C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccccchhhHHHHHH
Confidence 0 0 000123466899999999999999999999998 44443333333333333
No 199
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.9e-39 Score=302.93 Aligned_cols=256 Identities=25% Similarity=0.413 Sum_probs=202.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-Cc----EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD-GS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
.++|+..+.||+|+||.||+|...+ |. .+|+|.+...........+.+|+++++.++|+|++++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 4567888999999999999998642 32 5899988766544445678899999999999999999999887 7889
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
++|||+++|+|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKD---NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEecCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 99999999999999876432 389999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCceee-ccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 276 MDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 276 ~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
.......... ...++..|+|||.+....++.++||||||+++||+++ |+.||+... ..++.........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~- 229 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP--------AVEIPDLLEKGER- 229 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHHhCCCC-
Confidence 6533222111 1223568999999988889999999999999999998 999995321 1112111111100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...+..+...+.+++.+||..+|.+|||+.++++.|+..
T Consensus 230 ---------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 230 ---------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 011111234588999999999999999999999999874
No 200
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.4e-39 Score=306.71 Aligned_cols=273 Identities=23% Similarity=0.334 Sum_probs=202.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||+|+||.||+|... +++.||+|.+...........+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888899999999999999876 57899999987554444445677899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. ++|..++..... .+++..++.++.|+++||+|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 86 ~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDCGN---SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 96 588888865432 488999999999999999999999 99999999999999999999999999987543222
Q ss_pred CceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh----------
Q 013238 281 THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK---------- 349 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 349 (447)
. ......++..|+|||++.+. .++.++||||||+++|||++|+.||..... ............
T Consensus 159 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 159 K-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-----EEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred C-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCChhhchhh
Confidence 1 12223468899999988654 578899999999999999999999953211 111111111100
Q ss_pred --ccccccccccccCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCchhh
Q 013238 350 --EKKLEQLVDSDMEGN----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERW 407 (447)
Q Consensus 350 --~~~~~~~~d~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 407 (447)
.........+..... ........+.+++.+|++.||.+|||+.++++.-.-..++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~ 296 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERI 296 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchh
Confidence 000000000000000 0112244578999999999999999999998754444444443
No 201
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=308.03 Aligned_cols=253 Identities=24% Similarity=0.350 Sum_probs=211.8
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccc--hHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcce
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQG--GELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 195 (447)
..+.|++.+.||+|.||.||++..+. |+.+|+|.+.+..... ....+.+|+.+|+++. |||||.+.+++.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34578888999999999999999874 9999999997765433 3357899999999999 999999999999999999
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC----CcEEEeecC
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE----FEAVVGDFG 271 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg 271 (447)
+|||++.||.|.+.+... .+++.....++.|++.+++|||+. +|+||||||+|+|+... +.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999999776 289999999999999999999999 99999999999999543 579999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 351 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (447)
++..... .......+||+.|+|||++....|+..+||||+|+++|.|++|..||.... ...... .....
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~----~~~~~~----~i~~~- 253 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET----EFEIFL----AILRG- 253 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC----hhHHHH----HHHcC-
Confidence 9998765 455666789999999999999999999999999999999999999996421 111111 11110
Q ss_pred ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 352 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 352 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+................+++..|+..||..|+|+.++++.
T Consensus 254 ------~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 254 ------DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1123334455567778899999999999999999999994
No 202
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.4e-39 Score=304.70 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=198.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
.|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3555677999999999999875 578899999875544444457889999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++++|.+++... ++++..+..++.++++||.|||++ +++|+||+|+||++++++.++|+|||++........
T Consensus 85 ~~~~L~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 85 GGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 999999988542 388999999999999999999999 999999999999999999999999999876543221
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
......++..|+|||++.+..++.++||||||+++|||++|+.|+..... .. .... .. ...
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~---~~~~-~~---------~~~ 217 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP-----MR---VLFL-IP---------KNS 217 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch-----hh---HHhh-hh---------cCC
Confidence 11223478899999999988899999999999999999999999853110 00 0000 00 000
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
...........+.+++.+||+.+|.+|||+.++++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 111122334568899999999999999999999984
No 203
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=275.68 Aligned_cols=268 Identities=23% Similarity=0.391 Sum_probs=207.5
Q ss_pred CCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEEecccCC
Q 013238 127 RNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+..||.|..|.||++.+. +|...|||.+.........++++..++++.+-. .|.||+.+|+|......++.||.| ..
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~ 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-ST 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HH
Confidence 345999999999999976 589999999987777666777888888876654 899999999999999999999998 44
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCcee
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 284 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 284 (447)
.+..++.... .++++..+-++...+++||.||.+++ +|+|||+||+|||+|+.|.+|++|||++..+-.+ ...
T Consensus 176 C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--kAh 248 (391)
T KOG0983|consen 176 CAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--KAH 248 (391)
T ss_pred HHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc--ccc
Confidence 5666665543 35899999999999999999999887 9999999999999999999999999999876433 333
Q ss_pred eccccccCccccccccC---CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 285 TAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 285 ~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
+...|.+.|||||.+.- ..|+.++||||||+.|+||.||..||..-. .+ .+.+...+.++. +.+
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~----td---Fe~ltkvln~eP------P~L 315 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK----TD---FEVLTKVLNEEP------PLL 315 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC----cc---HHHHHHHHhcCC------CCC
Confidence 44568999999999864 368899999999999999999999996421 11 122222222111 122
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--H-hcCCCchhhHHHHHhhhhh
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM--L-EGDGLAERWEEWQKEEMFR 417 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L-~~~~~~~~~~~~~~~~~~~ 417 (447)
... ......+.+++..||+.|+.+||...++++. + .=...+.+..+|+...+-.
T Consensus 316 ~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~~dVa~WF~dV~~~ 372 (391)
T KOG0983|consen 316 PGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAEVDVASWFKDVMAK 372 (391)
T ss_pred Ccc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhhccHHHHHHHHHhc
Confidence 211 1145668899999999999999999999873 2 2234456667777766543
No 204
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.2e-38 Score=296.19 Aligned_cols=249 Identities=25% Similarity=0.365 Sum_probs=201.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||+|++|.||+|...+ ++.+++|.+..... ...+.+|+++++.++|+|++++++++......++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578888999999999999999864 78999999865432 45788999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+++|.+++.... ..+++..++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 80 ~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 80 CGAGSVSDIMKITN---KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred CCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 99999999986543 3489999999999999999999999 99999999999999999999999999988654332
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
. ......++..|+|||++.+..++.++||||||+++|+|++|+.||...... ...... ... ..
T Consensus 154 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--------~~~~~~-~~~-------~~ 216 (256)
T cd06612 154 A-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--------RAIFMI-PNK-------PP 216 (256)
T ss_pred c-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--------hhhhhh-ccC-------CC
Confidence 1 222334788999999999889999999999999999999999999632110 000000 000 00
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
............+.+++.+||+.+|.+|||+.++++
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 217 PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 001112223456899999999999999999999986
No 205
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1e-38 Score=306.88 Aligned_cols=246 Identities=23% Similarity=0.304 Sum_probs=189.7
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHH-HHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
++||+|+||.||+|+.. +++.||+|.+..... ......+..|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999976 588999999865432 122234455554 57889999999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|...+.... .+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (321)
T cd05603 81 GELFFHLQRER----CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ET 152 (321)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cc
Confidence 99988886532 378888999999999999999999 99999999999999999999999999987532221 12
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||.... ........... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~---------~~-- 213 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------VSQMYDNILHK---------PL-- 213 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC--------HHHHHHHHhcC---------CC--
Confidence 233458999999999998899999999999999999999999995321 11111111111 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHHHhc
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMS-EVVRMLEG 400 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl~~L~~ 400 (447)
..+......+.+++.+||+.+|.+||++. ++++.++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 11112345688999999999999999874 34444443
No 206
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.9e-39 Score=298.78 Aligned_cols=253 Identities=29% Similarity=0.441 Sum_probs=198.2
Q ss_pred CCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccchHH-HHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 124 FSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGEL-QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~-~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
|+..+.||+|+||+||+++... ++.+|+|.+.......... ...+|+.++..++|+||+++++++......+++|||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4566889999999999999874 6789999997664433222 3456999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+++|.+++.... .+++..++.++.|+++||++||++ +++|+||||+||++++++.++|+|||.+.... ...
T Consensus 81 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQKNK----PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENN 152 (260)
T ss_dssp TTEBHHHHHHHHS----SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STT
T ss_pred ccccccccccccc----cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccc
Confidence 9999999998332 389999999999999999999999 99999999999999999999999999997542 222
Q ss_pred ceeeccccccCcccccccc-CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......++..|+|||++. +..++.++||||+|+++|+|++|..||... ................. ....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~-----~~~~~~~~~~~~~~~~~----~~~~ 223 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES-----NSDDQLEIIEKILKRPL----PSSS 223 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS-----SHHHHHHHHHHHHHTHH----HHHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-----cchhhhhhhhhcccccc----cccc
Confidence 3344456899999999998 788999999999999999999999999642 00111111111111000 0000
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.........+.+++.+||+.||++|||+.++++
T Consensus 224 ---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 ---QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp ---TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ---cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000011267999999999999999999999875
No 207
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7.9e-39 Score=308.24 Aligned_cols=247 Identities=23% Similarity=0.291 Sum_probs=191.4
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHH-HHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|+||+||+|... +|+.+|+|++..... ......+..|.. +++.++||||+++++++...+..++||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999875 689999999965422 122234455554 46779999999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... ++++..+..++.||+.||+|||+. +++||||||+|||+++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~ 152 (325)
T cd05604 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DT 152 (325)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CC
Confidence 99998886532 488999999999999999999999 99999999999999999999999999987532211 12
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||.... ............ .....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~~~~~~-------~~~~~ 217 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD--------VAEMYDNILHKP-------LVLRP 217 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC--------HHHHHHHHHcCC-------ccCCC
Confidence 234468999999999999999999999999999999999999995311 111111111110 00111
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.....+.+++.+|++.+|.+||++++.++.+...
T Consensus 218 ----~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 218 ----GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred ----CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 1234578899999999999999997555544443
No 208
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=6.8e-39 Score=302.49 Aligned_cols=264 Identities=25% Similarity=0.387 Sum_probs=204.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-----CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeec--CCcc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 194 (447)
++|...+.||+|+||.||++... ++..+|||.+...........+.+|+++++.+.|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777789999999999999854 3678999999765443345578999999999999999999999877 5578
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
+++|||+++++|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD---QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 999999999999999976432 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCC-------cccHHHHHH
Q 013238 275 LMDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD-------DVMLLDWVK 345 (447)
Q Consensus 275 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~-------~~~~~~~~~ 345 (447)
......... .....++..|+|||.+.+..++.++||||||+++|||++|..|+......... ......+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 765222211 11123456799999998889999999999999999999999998532111000 000111111
Q ss_pred HHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
. .. ..........+...+.+++.+||+.+|.+|||+.+|+++|+.+
T Consensus 238 ~-~~---------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 L-LK---------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred H-HH---------cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1 11 1111111223346789999999999999999999999999875
No 209
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-38 Score=310.62 Aligned_cols=266 Identities=21% Similarity=0.254 Sum_probs=194.3
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT----- 192 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 192 (447)
..++|+..+.||+|+||.||++... +|+.||||.+..... ......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3478999999999999999999875 588999999965422 233446778999999999999999999886443
Q ss_pred -cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 193 -ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 193 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
..++||||+.+ +|...+.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999965 56655532 278889999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccC----------CCcccHH
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN----------DDDVMLL 341 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~----------~~~~~~~ 341 (447)
+++..... .......||..|+|||++.+..++.++|||||||++|+|++|+.||....... .......
T Consensus 169 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 169 LARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 99754321 12233458899999999999999999999999999999999999996321100 0000000
Q ss_pred HH----HHHHhhcc-cc-----ccccccc-cC--CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 342 DW----VKGLLKEK-KL-----EQLVDSD-ME--GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 342 ~~----~~~~~~~~-~~-----~~~~d~~-~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+. +....... .. .+..... .. ..........+.+++.+||+.||.+|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 00000000 00 0000000 00 00011123567899999999999999999999873
No 210
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-38 Score=315.58 Aligned_cols=263 Identities=19% Similarity=0.221 Sum_probs=194.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
...|.+.+.||+|+||.||++... .++.||||.... ..+.+|++++++++|+||+++++++......+++|+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 346888899999999999999976 478899996432 135689999999999999999999998899999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
++ .++|..++.... .++++..++.|+.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 241 ~~-~~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 241 KY-RSDLYTYLGARL---RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred cc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 99 568888876532 2489999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCc---ccHHHHHHHHhh-ccccc
Q 013238 280 DTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD---VMLLDWVKGLLK-EKKLE 354 (447)
Q Consensus 280 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~ 354 (447)
... ......||..|+|||++.+..++.++|||||||++|||++|..++-......... ..+...+..... .....
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 211 1223468999999999999999999999999999999999887652211100001 111111111000 00000
Q ss_pred cc----------------cccccCCCCc---HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 355 QL----------------VDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 355 ~~----------------~d~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.. ..+....... ......+.+++.+||+.||.+|||+.|+++.
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0000000000 0122357889999999999999999999874
No 211
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.6e-38 Score=297.79 Aligned_cols=256 Identities=25% Similarity=0.359 Sum_probs=200.1
Q ss_pred CCCCCCeeeecCCeEEEEEEECC--CcEEEEEEecccc---------ccchHHHHHHHHHHHHh-cCCCceeeEeeeeec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTD--GSLVAVKRLKEER---------TQGGELQFQTEVEMISM-AVHRNLLRLRGFCMT 190 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~---------~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 190 (447)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... .......+..|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36778899999999999999764 6889999885321 11222346678887764 799999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
.+..+++|||+++++|.+++.........+++..++.++.|++.||.|||+.. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988654333445899999999999999999999631 8999999999999999999999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
|++....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||.... ...........
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~--------~~~~~~~~~~~ 228 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN--------MLSLATKIVEA 228 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC--------HHHHHHHHhhc
Confidence 9998654332 2334458889999999998889999999999999999999999985321 11111111111
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 351 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 351 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
..... ........+.+++.+||+.||++||++.|+..+++
T Consensus 229 -~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 -VYEPL--------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -cCCcC--------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00000 01122356889999999999999999999999886
No 212
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.3e-38 Score=294.16 Aligned_cols=254 Identities=23% Similarity=0.373 Sum_probs=189.8
Q ss_pred eeeecCCeEEEEEEECCC---cEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCc
Q 013238 129 ILGRGGFGKVYKGRLTDG---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 205 (447)
.||+|+||.||++...++ ..+++|.+...........+.+|+++++.++||||+++++.+......+++|||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999975433 34667776554433445578899999999999999999999999899999999999999
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC-Ccee
Q 013238 206 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVT 284 (447)
Q Consensus 206 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-~~~~ 284 (447)
|.+++..........++..++.++.||+.||+|||+. +++||||||+|||++.++.++|+|||++....... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999986543334467788889999999999999999 99999999999999999999999999986432111 1112
Q ss_pred eccccccCccccccccC-------CCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 285 TAVRGTIGHIAPEYLST-------GKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 285 ~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
....++..|+|||++.. ..++.++||||||+++|||++ |..||... ...+........ ....+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~--------~~~~~~~~~~~~-~~~~~ 229 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL--------SDREVLNHVIKD-QQVKL 229 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHhh-ccccc
Confidence 23457889999998753 235789999999999999997 56677421 111222222221 11222
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
.++.+... ....+.+++..|| .+|.+|||+++|++.|.
T Consensus 230 ~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22222222 3355778888999 57999999999999874
No 213
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.5e-39 Score=302.70 Aligned_cols=264 Identities=23% Similarity=0.295 Sum_probs=201.4
Q ss_pred CHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeee-
Q 013238 113 SLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM- 189 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~- 189 (447)
.++.+..+.++|+..+.||+|+||.||++... +++.+|+|.+.... .....+.+|+.+++.+ +|+||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 34445567789999999999999999999875 57899999886432 2234577899999998 6999999999874
Q ss_pred ----cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcE
Q 013238 190 ----TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 265 (447)
Q Consensus 190 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~ 265 (447)
.....+++|||+++++|.+++.........+++..+..++.|++.||.|||+. +++||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 33567999999999999998865433344588999999999999999999999 99999999999999999999
Q ss_pred EEeecCCccccCCCCCceeeccccccCccccccccC-----CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccH
Q 013238 266 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 340 (447)
Q Consensus 266 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~ 340 (447)
+|+|||++........ ......|+..|+|||++.. ..++.++|||||||++|||++|+.||.....
T Consensus 164 kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-------- 234 (286)
T cd06638 164 KLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-------- 234 (286)
T ss_pred EEccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch--------
Confidence 9999999876543221 1223358899999998853 4578899999999999999999999853210
Q ss_pred HHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 341 LDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
.......... ......+ .......+.+++.+||+.+|++|||+.++++.+
T Consensus 235 ~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 235 MRALFKIPRN-PPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hHHHhhcccc-CCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0000000000 0000000 111234688999999999999999999998753
No 214
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2e-38 Score=297.07 Aligned_cols=254 Identities=26% Similarity=0.383 Sum_probs=189.2
Q ss_pred eeeecCCeEEEEEEECC---CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCc
Q 013238 129 ILGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 205 (447)
.||+|+||.||+|...+ ...+++|.+...........+.+|++.++.++|+||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 357888887655444445568889999999999999999999999999999999999999
Q ss_pred chhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce-
Q 013238 206 VASCLRERGQS-QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV- 283 (447)
Q Consensus 206 L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~- 283 (447)
|.+++...... ....++...+.++.||+.||+|||++ +|+||||||+|||+++++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999765432 22356788899999999999999999 99999999999999999999999999986533221111
Q ss_pred eeccccccCccccccccC-------CCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 284 TTAVRGTIGHIAPEYLST-------GKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||.... . .+......... ...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~---~~~~~~~~~~~-~~~ 229 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS-----D---EQVLKQVVREQ-DIK 229 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC-----H---HHHHHHHhhcc-Ccc
Confidence 122335678999998743 356889999999999999999 778884211 0 11111111111 011
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
+..+. ........+.+++..|| .||.+|||+.+|++.|.
T Consensus 230 ~~~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11111 12223455677888888 59999999999999873
No 215
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.6e-38 Score=295.50 Aligned_cols=252 Identities=31% Similarity=0.480 Sum_probs=201.3
Q ss_pred CCCCCeeeecCCeEEEEEEECC-----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 124 FSNRNILGRGGFGKVYKGRLTD-----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+++.+.||.|+||.||++...+ +..||+|.+...........+..|++++..++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3566889999999999998763 38899999976654435567889999999999999999999999989999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++...... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPK--ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhhhc--cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 999999999998764321 189999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
..........++..|+|||.+.+..++.++||||||+++++|++ |..||... ...+..........
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--------~~~~~~~~~~~~~~----- 222 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--------SNEEVLEYLKKGYR----- 222 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHhcCCC-----
Confidence 32222212236789999999988889999999999999999998 78888531 11111111111110
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
..........+.+++.+||+.+|.+|||+.++++.|
T Consensus 223 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 -----LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011112456689999999999999999999999865
No 216
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8.8e-39 Score=308.57 Aligned_cols=256 Identities=20% Similarity=0.283 Sum_probs=194.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|...+.||+|+||.||+++.. +++.||+|.+.... .......+..|..++..++|+||+.+++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999976 57889999986532 1222335778899999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 Ey~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKFED---RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999976432 388999999999999999999999 999999999999999999999999999976544
Q ss_pred CCCceeeccccccCccccccccC-----CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
..........|++.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..+...........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~ 226 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHEER 226 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC--------HHHHHHHHHcCCCc
Confidence 33323333568999999999875 467889999999999999999999995311 11111111111100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPME--RPKMSEVVRM 397 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 397 (447)
.. + ..........+.+++.+|+..++.. |++++++++.
T Consensus 227 ~~-----~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 227 FQ-----F-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred cc-----C-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 0 0111123456778888888765443 4567666643
No 217
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-38 Score=301.10 Aligned_cols=260 Identities=24% Similarity=0.393 Sum_probs=204.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|+..+.||+|+||+||++... +++.||+|.+...........+.+|+++++.++|+||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 356777889999999999999875 5889999998765444445678899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|..++...+ ++++..+..++.+++.||.|||+.. +++|+||+|+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 84 FMDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred cCCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999886532 4899999999999999999999732 8999999999999999999999999998654221
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCC---CcccHHHHHHHHhhccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND---DDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 356 (447)
. .....|+..|+|||++.+..++.++|||||||++|+|++|+.||........ ......+++........
T Consensus 158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 230 (284)
T cd06620 158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP---- 230 (284)
T ss_pred c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC----
Confidence 1 1234588999999999888899999999999999999999999964221110 01111222222211110
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
+.+ ........+.+++.+||+.||.+|||+.|+++..
T Consensus 231 --~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 231 --PRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --CCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000 1112445688999999999999999999999864
No 218
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.8e-38 Score=296.77 Aligned_cols=251 Identities=24% Similarity=0.422 Sum_probs=198.6
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccc-----cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-----QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
+|...+.||+|+||.||+|...+++.+|+|.+..... ......+.+|+++++.++|+||+++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677889999999999999988889999999864321 11224588899999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
+||+++++|.+++.... ++++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 99999999999996543 378999999999999999999999 99999999999999999999999999987543
Q ss_pred CCC-----CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 278 YKD-----THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 278 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
... ........++..|+|||++.+..++.++||||||+++|+|++|+.||..... ..... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-------~~~~~-~~~~~-- 223 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-------LAAMF-YIGAH-- 223 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-------HHHHH-Hhhhc--
Confidence 211 1112234578899999999988899999999999999999999999953110 00000 00000
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.. ..+ .........+.+++.+||+.+|.+|||+.++++
T Consensus 224 -~~-~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 224 -RG-LMP----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -cC-CCC----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 001 111223456889999999999999999999875
No 219
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=6.9e-39 Score=308.23 Aligned_cols=243 Identities=24% Similarity=0.339 Sum_probs=191.1
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 198 (447)
+|+..+.||+|+||.||+|... +|+.||+|++..... ......+..|.+++..+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677789999999999999875 688999999975432 222345677888888776 567788999888888999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|..++.... .+++..++.++.|++.||+|||++ +++||||||+|||+++++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQVG----KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 9999999999886543 389999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
.. .......||..|+|||++.+..++.++|||||||++|||++|+.||.... ............
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~~~~------- 217 (323)
T cd05615 154 DG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED--------EDELFQSIMEHN------- 217 (323)
T ss_pred CC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-------
Confidence 21 12233458999999999999899999999999999999999999995321 111111111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMS 392 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 392 (447)
. ..+......+.+++.+||+.+|.+|++..
T Consensus 218 --~--~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 218 --V--SYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred --C--CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 0 11112335678899999999999999853
No 220
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.1e-38 Score=301.50 Aligned_cols=251 Identities=27% Similarity=0.377 Sum_probs=197.0
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
|+..+.||+|+||.||++... +++.||+|.+....... ....+..|+.+++.++|+|++.+.+.+...+..+++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999876 68899999986543222 233567899999999999999999999988999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 999999998865432 3488999999999999999999999 99999999999999999999999999987543221
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||.... .. ............. .
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~----~~-~~~~~~~~~~~~~--~------ 221 (285)
T cd05630 157 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK----KK-IKREEVERLVKEV--Q------ 221 (285)
T ss_pred --cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC----cc-chHHHHHhhhhhh--h------
Confidence 1223458999999999999999999999999999999999999996311 00 0001111111100 0
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 396 (447)
..........+.+++.+||+.||.+||| +.++++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 --EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred --hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0111123455889999999999999999 677765
No 221
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-38 Score=300.16 Aligned_cols=254 Identities=22% Similarity=0.356 Sum_probs=195.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHH-HHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEM-ISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|+..+.||+|+||.||++... +|+.||+|+++..........+..|+.. ++..+|+|++++++++......+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999976 5899999999765433334455666664 566789999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|++ |+|.+++.........+++..++.++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 995 6888888664434456899999999999999999999854 7999999999999999999999999998765321
Q ss_pred CCceeeccccccCccccccccC----CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
. ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||.... . .. +.+.......
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~--~~-~~~~~~~~~~---- 224 (283)
T cd06617 158 V--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK----T--PF-QQLKQVVEEP---- 224 (283)
T ss_pred c--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc----c--CH-HHHHHHHhcC----
Confidence 1 1222347889999998865 446889999999999999999999995211 0 00 1111111100
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... ........+.+++.+||+.+|.+|||+.++++
T Consensus 225 --~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 225 --SPQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0001 01123456889999999999999999999987
No 222
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.6e-38 Score=299.89 Aligned_cols=260 Identities=25% Similarity=0.364 Sum_probs=199.9
Q ss_pred cCHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeee
Q 013238 112 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 189 (447)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 189 (447)
.++.++..+.+.|+..+.||+|+||.||+|... +++.+|+|.+.... .....+..|+.++.++ +|+|++++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 345555567788999999999999999999975 58899999885432 2234577888888888 6999999999885
Q ss_pred c------CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC
Q 013238 190 T------PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 263 (447)
Q Consensus 190 ~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~ 263 (447)
. ....+++|||+.+|+|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||++++++
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 3 3467899999999999999876432 2478888999999999999999999 999999999999999999
Q ss_pred cEEEeecCCccccCCCCCceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcc
Q 013238 264 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 338 (447)
Q Consensus 264 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~ 338 (447)
.++|+|||++........ ......|+..|+|||.+. ...++.++||||||+++|||++|+.||......
T Consensus 159 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~----- 232 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM----- 232 (282)
T ss_pred CEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH-----
Confidence 999999999875432221 122345788999999875 345788999999999999999999999532100
Q ss_pred cHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 339 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.-.... ................+.+++.+||+.||.+|||+.++++
T Consensus 233 ---~~~~~~---------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 233 ---RALFLI---------PRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ---hhhhhH---------hhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000000 0000001111223456899999999999999999999875
No 223
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.1e-38 Score=295.90 Aligned_cols=240 Identities=23% Similarity=0.359 Sum_probs=186.1
Q ss_pred CeeeecCCeEEEEEEECC-------------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcc
Q 013238 128 NILGRGGFGKVYKGRLTD-------------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 194 (447)
+.||+|+||.||+|.... ...|++|.+.... ......+.+|+.++..++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 358999999999997532 2358889876533 23344678889999999999999999999998999
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc-------EEE
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE-------AVV 267 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~-------~kl 267 (447)
+++|||+++|+|..++.... .++++..++.++.||++||+|||++ +++||||||+|||++.++. +++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS---DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEEecccCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 99999999999998886533 2489999999999999999999999 9999999999999987664 899
Q ss_pred eecCCccccCCCCCceeeccccccCcccccccc-CCCCCchhhhHHHHHHHHHHH-hCCCCcccccccCCCcccHHHHHH
Q 013238 268 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELI-TGQRAFDLARLANDDDVMLLDWVK 345 (447)
Q Consensus 268 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 345 (447)
+|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..||..... .+. .
T Consensus 154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~-~ 219 (262)
T cd05077 154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL--------AEK-E 219 (262)
T ss_pred CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch--------hHH-H
Confidence 999998754322 1234778899999886 466899999999999999998 58888743110 000 0
Q ss_pred HHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
...... .. ........+.+++.+||+.||.+||++.++++.|+
T Consensus 220 ~~~~~~---------~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQ---------CM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcC---------cc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 111100 00 01112356889999999999999999999998764
No 224
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=282.84 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=200.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccch-------HHHHHHHHHHHHhc-CCCceeeEeeeeecCC
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGG-------ELQFQTEVEMISMA-VHRNLLRLRGFCMTPT 192 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 192 (447)
+.|...+.||+|..++|.++..+ +|...|+|++........ ...-..|+.+|+++ .||+|+.+.+++..+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 46778889999999999998765 688899999864332211 12345688899887 4999999999999999
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..++|+|.|+.|.|.++|...- .+++.....|+.|+.+|+.|||.+ +||||||||+|||+|++.++||+|||+
T Consensus 97 F~FlVFdl~prGELFDyLts~V----tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKV----TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred hhhhhhhhcccchHHHHhhhhe----eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999997643 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccCccccccccC------CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH
Q 013238 273 AKLMDYKDTHVTTAVRGTIGHIAPEYLST------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 273 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
++.+.. +......+||++|+|||.+.- ..|+...|+||+|+|+|.|+.|.+||..-.. .+ .++.
T Consensus 170 a~~l~~--GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ------ml--MLR~ 239 (411)
T KOG0599|consen 170 ACQLEP--GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ------ML--MLRM 239 (411)
T ss_pred eeccCC--chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH------HH--HHHH
Confidence 998754 444567789999999998842 3578899999999999999999999942110 00 0011
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... .-........+......+++.+||+.||.+|.|++|+++
T Consensus 240 ImeG-------kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 240 IMEG-------KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHhc-------ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1110 011223334556677889999999999999999999886
No 225
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=315.88 Aligned_cols=251 Identities=27% Similarity=0.414 Sum_probs=211.0
Q ss_pred CCCCeeeecCCeEEEEEEEC-C----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 125 SNRNILGRGGFGKVYKGRLT-D----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 125 ~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
...++||+|+||+||+|.+- . ..+||||++......+...+++.|.-.|.+++|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 44578999999999999853 3 34799999988777777788999999999999999999999998766 789999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
||+.|+|.++++..+. ++.....+.|..|||+||.|||.+ ++|||||..+||||.+-..+||+|||+++.+...
T Consensus 778 ~mP~G~LlDyvr~hr~---~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRD---NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHHhhc---cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 9999999999988654 488899999999999999999999 9999999999999999999999999999988765
Q ss_pred CCceeec-cccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 280 DTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 280 ~~~~~~~-~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
....... ..-.+.|||-|.+....|+.++|||||||++||++| |..|++... ...+.+++
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~------------------~~eI~dll 913 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP------------------AEEIPDLL 913 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC------------------HHHhhHHH
Confidence 5443222 223568999999999999999999999999999998 999986421 11222333
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
....+-..++.+..++..+|.+||..|+..||+++++...+.+
T Consensus 914 e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~ 956 (1177)
T KOG1025|consen 914 EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR 956 (1177)
T ss_pred hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence 3333344566777889999999999999999999999987765
No 226
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.1e-38 Score=306.11 Aligned_cols=256 Identities=20% Similarity=0.279 Sum_probs=194.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..++||+|+||.||+++.. +++.+|+|.+.+... ......+..|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888899999999999999976 478899999864321 222334778899999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999976432 388999999999999999999999 999999999999999999999999999876533
Q ss_pred CCCceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||... ...+...........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~--------~~~~~~~~i~~~~~~ 226 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGKIMNHKER 226 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC--------CHHHHHHHHhCCCcc
Confidence 3322233346899999999986 346788999999999999999999999532 112222222111100
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHH
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQG--SPMERPKMSEVVRM 397 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~--dP~~RPt~~evl~~ 397 (447)
.. . ..........+.+++.+|+.. ++..|+++.++++.
T Consensus 227 ~~-----~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 FQ-----F-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cc-----C-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 0 011112344567777777754 44446888888765
No 227
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.4e-38 Score=294.24 Aligned_cols=252 Identities=24% Similarity=0.365 Sum_probs=203.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||.|+||.||.++.. +++.+++|.+.... .......+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5788899999999999999865 58899999986543 233445688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++.... ...+++..+..++.+++.||+|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999997653 23489999999999999999999999 99999999999999999999999999998654333
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
. ......++..|+|||.+.+..++.++||||||+++|||++|..||.... ..+......... ..
T Consensus 156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~~~~-~~------ 219 (256)
T cd08221 156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN--------PLNLVVKIVQGN-YT------ 219 (256)
T ss_pred c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC-CC------
Confidence 2 2233458899999999988889999999999999999999999995311 112222211110 00
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
.........+.+++.+||+.+|.+|||+.++++.+
T Consensus 220 ---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 220 ---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11123345688999999999999999999998753
No 228
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.5e-38 Score=296.31 Aligned_cols=258 Identities=23% Similarity=0.340 Sum_probs=197.9
Q ss_pred HHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 117 LQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 117 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
++.+++++.....||+|+||.||+|... ++..|++|.+..... .....+.+|+++++.++|+||+++++++...+..+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 3445666666778999999999999865 577899998865432 23446889999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC-CCcEEEeecCCcc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAK 274 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~ 274 (447)
+++||+++++|.+++...... ...++..+..++.|++.||+|||+. +++||||||+||+++. ++.++|+|||++.
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGP-LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEecCCCCCHHHHHHHhccc-CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 999999999999999764221 1127888899999999999999999 9999999999999976 6799999999987
Q ss_pred ccCCCCCceeeccccccCccccccccCCC--CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
....... ......++..|+|||++.+.. ++.++||||||+++|+|++|+.||..... .....+......
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~-----~~~~~~~~~~~~--- 228 (268)
T cd06624 158 RLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE-----PQAAMFKVGMFK--- 228 (268)
T ss_pred ecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC-----hhhhHhhhhhhc---
Confidence 6532221 122234788999999986644 78899999999999999999999853110 000000000000
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.....+......+.+++.+||+.+|.+|||+.+++.
T Consensus 229 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 --------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 011112234456889999999999999999999876
No 229
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.6e-39 Score=316.03 Aligned_cols=200 Identities=23% Similarity=0.359 Sum_probs=172.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|+||.||++... +++.||+|++..... ......+..|++++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888899999999999999876 588999999964321 223346778999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++.....
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMKKD----TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 9999999999987543 388999999999999999999999 999999999999999999999999999875421
Q ss_pred CCC----------------------------------ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCC
Q 013238 279 KDT----------------------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 324 (447)
Q Consensus 279 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~ 324 (447)
... .......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 110 0011346899999999999999999999999999999999999
Q ss_pred CCcc
Q 013238 325 RAFD 328 (447)
Q Consensus 325 ~p~~ 328 (447)
.||.
T Consensus 234 ~Pf~ 237 (360)
T cd05627 234 PPFC 237 (360)
T ss_pred CCCC
Confidence 9995
No 230
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3e-38 Score=298.91 Aligned_cols=261 Identities=25% Similarity=0.322 Sum_probs=190.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-hHHHHHHHHHHHHhc---CCCceeeEeeeeecC-----C
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMA---VHRNLLRLRGFCMTP-----T 192 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~-----~ 192 (447)
+|+..+.||+|+||+||+|... +++.||+|.++...... ....+.+|+++++.+ +|+||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999876 68899999987543222 223455677666554 799999999987642 3
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..+++|||+. ++|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+|||+
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 4689999996 488888865432 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 273 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 273 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
+....... ......++..|+|||++.+..++.++|||||||++|||++|+.||.... ....+.... .......
T Consensus 155 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~----~~~~~~~~~-~~~~~~~ 227 (288)
T cd07863 155 ARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS----EADQLGKIF-DLIGLPP 227 (288)
T ss_pred cccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC----HHHHHHHHH-HHhCCCC
Confidence 97654221 1223457889999999998899999999999999999999999985311 111111111 1100000
Q ss_pred ccc----------ccccccC---CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQ----------LVDSDME---GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~----------~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
... ....... ..........+.+++.+||+.||.+|||+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 228 EDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 0000000 0011123456789999999999999999999885
No 231
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.5e-38 Score=308.51 Aligned_cols=266 Identities=20% Similarity=0.223 Sum_probs=194.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecC------
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------ 191 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 191 (447)
..++|+..+.||+|+||.||++... .++.||||.+..... ......+.+|+.+++.++|+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999865 588999999975432 22344677899999999999999999987643
Q ss_pred CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
...+++|||+.+ +|...+.. .+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 246899999965 66666542 278899999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCC----------Cccc--
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND----------DDVM-- 339 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~----------~~~~-- 339 (447)
+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 165 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 165 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99864322 122334589999999999998999999999999999999999999953211000 0000
Q ss_pred --HHHHHHHHhhc-cccccccccc------c--CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 340 --LLDWVKGLLKE-KKLEQLVDSD------M--EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 340 --~~~~~~~~~~~-~~~~~~~d~~------~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+...+...... .....+..+. . ...........+.+++.+||+.||.+|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000 0000000000 0 000111224567899999999999999999999874
No 232
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.4e-38 Score=299.01 Aligned_cols=264 Identities=21% Similarity=0.297 Sum_probs=195.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|++|.||+|... +++.||+|.+...... .....+.+|+.++..++|+|++++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777889999999999999975 6889999998654322 2334678899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. ++|.+++..... ...+++..++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 96 688888765432 23589999999999999999999999 99999999999999999999999999987654322
Q ss_pred CceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh----------
Q 013238 281 THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK---------- 349 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 349 (447)
.......++..|+|||++.+. .++.++||||||+++|+|+||+.||..... .............
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSE----IDQLFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHHHhCCCChhhhhcch
Confidence 122233468899999988654 578999999999999999999999953210 0000000000000
Q ss_pred -ccccccccccccC---CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 -EKKLEQLVDSDME---GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 -~~~~~~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
............. ..........+.+++.+||+.||.+|||+.+|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000000 0001113456789999999999999999999875
No 233
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.9e-38 Score=302.99 Aligned_cols=199 Identities=22% Similarity=0.298 Sum_probs=164.2
Q ss_pred CCCeeeec--CCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 126 NRNILGRG--GFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 126 ~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
+.++||+| +|++||++... +|+.||+|++...... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35679999 68999999875 6899999999765332 23345778999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++|+|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+|||++.++.++++||+..........
T Consensus 82 ~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 99999999865432 2488999999999999999999999 999999999999999999999999986543221111
Q ss_pred c------eeeccccccCccccccccC--CCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 282 H------VTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 282 ~------~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0 0112236678999999976 4588999999999999999999999963
No 234
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.8e-38 Score=294.91 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=201.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeec--CCcceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 198 (447)
+|+..+.||.|+||.||++... +++.+|+|.+..... ......+..|+++++.++|+|++++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4777889999999999999865 678999999865432 2334568889999999999999999998764 34578999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH-----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH-----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
||+++++|.+++........++++..++.++.+++.||.||| +. +++|+||+|+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999775444456999999999999999999999 66 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 274 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 274 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
......... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ......... ..
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~-- 225 (265)
T cd08217 158 KILGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--------QLQLASKIK-EG-- 225 (265)
T ss_pred ccccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--------HHHHHHHHh-cC--
Confidence 876543321 223458899999999998889999999999999999999999996321 111111111 11
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
............+.+++.+||+.+|.+|||+.+|++.
T Consensus 226 -------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 226 -------KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1111222345678999999999999999999999863
No 235
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-38 Score=299.72 Aligned_cols=248 Identities=19% Similarity=0.315 Sum_probs=199.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
.+|+..+.||+|++|.||++... +++.||+|.+...... ....+.+|+.+++.++|+||+++++++......++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 57888999999999999999864 6899999998654322 334678899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++... .+++..+..++.+++.||.|||+. +++||||||+|||++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999998643 378899999999999999999999 99999999999999999999999999987654322
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc-cc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV-DS 359 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~ 359 (447)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... . ...... ..
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~---~--------------~~~~~~~~~ 231 (297)
T cd06656 170 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL---R--------------ALYLIATNG 231 (297)
T ss_pred cC-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc---h--------------heeeeccCC
Confidence 21 22235788999999999988999999999999999999999999532110 0 000000 00
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.............+.+++.+||+.+|.+|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 232 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000112223455788999999999999999999988
No 236
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-38 Score=305.42 Aligned_cols=193 Identities=25% Similarity=0.393 Sum_probs=164.3
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
....+|+..+.||+|+||.||+|... +++.||+|..... ....|+.++++++|+||+++++++......++|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 44567999999999999999999976 4778999975432 234689999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
||++ .++|.+++.... .++++..++.|+.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~-~~~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 136 LPHY-SSDLYTYLTKRS---RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEcc-CCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 9999 568888886533 3489999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 327 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~ 327 (447)
.. .......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 209 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 VA--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cC--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 21 1122345899999999999999999999999999999999865554
No 237
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=285.04 Aligned_cols=252 Identities=22% Similarity=0.299 Sum_probs=203.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
.+.|++.+.||+|.|+.|+++... +|+.+|+|++....- ...-..+.+|+.+.+.++||||+++.+...+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 356777788999999999998754 689999998864322 224557889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC---CCcEEEeecCCccc
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKL 275 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~ 275 (447)
|+|.|++|..-+-.+. -.++..+-.++.||+++|.|+|.+ +|||||+||.|+++-. .--+||+|||++..
T Consensus 90 e~m~G~dl~~eIV~R~----~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVARE----FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999977665542 267888889999999999999999 9999999999999954 33599999999998
Q ss_pred cCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 276 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 276 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
+. +........||+.|||||++...+|+..+|||+.|+|||-|+.|..||.... .-.+. +....
T Consensus 163 l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~-----~~rly---e~I~~------ 226 (355)
T KOG0033|consen 163 VN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLY---EQIKA------ 226 (355)
T ss_pred eC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc-----HHHHH---HHHhc------
Confidence 76 5566677789999999999999999999999999999999999999995311 00111 11110
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
-+..+.+...+...+...+++.+||..||.+|.|+.|.++
T Consensus 227 -g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 227 -GAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -cccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 0112223344555667888999999999999999988775
No 238
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.3e-38 Score=307.91 Aligned_cols=198 Identities=23% Similarity=0.287 Sum_probs=166.5
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecC------
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------ 191 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 191 (447)
..++|...+.||+|+||.||++... .++.||||++..... ......+.+|+.+++.++|+||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568999999999999999999875 588999999975432 23344677899999999999999999987543
Q ss_pred CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
...++||||+.+ +|...+.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 346899999965 67666642 278889999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
+++..... .......+|..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 172 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 172 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred CccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 99865322 122334589999999999999999999999999999999999999953
No 239
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2e-38 Score=294.49 Aligned_cols=247 Identities=30% Similarity=0.457 Sum_probs=197.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
++|+..+.||+|+||.||++.. +++.+|+|.+.... ....+.+|+.+++.++|+|++++++++.. +..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECC
Confidence 4688889999999999999975 57889999986532 23468899999999999999999998865 4579999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+++|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 81 SKGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred CCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 99999999976432 3488999999999999999999999 99999999999999999999999999987543211
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.....+..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+........
T Consensus 155 ---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~---------- 213 (254)
T cd05083 155 ---DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS--------LKEVKECVEKG---------- 213 (254)
T ss_pred ---CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC--------HHHHHHHHhCC----------
Confidence 11224567999999988899999999999999999998 999985321 11111111111
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.........+..+.+++.+||+.+|.+||++.+++..|+.
T Consensus 214 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 214 YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1111112234668899999999999999999999999875
No 240
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.6e-38 Score=292.16 Aligned_cols=254 Identities=24% Similarity=0.326 Sum_probs=201.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|+..+.||+|++|.||+|... +++.+++|.+...... ....+.+|+++++.++|+||+++++++......+++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 357888899999999999999875 5788999999754332 44578899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+.+++|.+++.... .++++..+..++.|++.||+|||++ +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 81 YCGGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred CCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 999999999887642 2488999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCceeeccccccCccccccccCC---CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTG---KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.. ......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .-...... ...
T Consensus 155 ~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~--------~~~~~~~~----~~~ 221 (262)
T cd06613 155 IA-KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM--------RALFLISK----SNF 221 (262)
T ss_pred hh-ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh----ccC
Confidence 21 12234578899999999776 7899999999999999999999999532100 00000000 000
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... ..........+.+++.+||+.+|.+|||+.+++.
T Consensus 222 ~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 222 PPPK--LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CCcc--ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 1122334567899999999999999999999875
No 241
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.4e-38 Score=294.35 Aligned_cols=249 Identities=23% Similarity=0.408 Sum_probs=197.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc--------hHHHHHHHHHHHHhcCCCceeeEeeeeecCCc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--------GELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 193 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 193 (447)
+|...+.||+|++|.||+|... +++.+|+|.+....... ....+.+|+++++.++|+||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677789999999999999875 57899999886443211 12357889999999999999999999999999
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
.+++|||+++++|.+++.... .+++..+..++.+++.||+|||+. +++||||+|+||++++++.++|+|||++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG----AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 999999999999999997643 378899999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCC-----ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHh
Q 013238 274 KLMDYKDT-----HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 274 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
+....... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||..... ..-+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~ 225 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ--------LQAIFKIG 225 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH--------HHHHHHHh
Confidence 86642111 111123478899999999988899999999999999999999999963210 00011100
Q ss_pred hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 349 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 349 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
. ... ...+......+.+++.+||+.+|.+||++.++++
T Consensus 226 ~------~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 E------NAS----PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c------cCC----CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 011 1112234466889999999999999999999876
No 242
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.1e-38 Score=296.96 Aligned_cols=247 Identities=26% Similarity=0.366 Sum_probs=193.5
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
|+..+.||+|+||+||++... +++.+|+|.+...... .....+.+|+++++.++|+|++.+.+.+...+..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999875 6889999998654322 2233567899999999999999999999988999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+++|..++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 999999988865432 3489999999999999999999999 99999999999999999999999999987643221
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
......|+..|+|||++.+..++.++||||||+++|||++|+.||.... ................
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~----~~~~~~~~~~~~~~~~--------- 221 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK----EKVKREEVDRRVLETE--------- 221 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHhhhccc---------
Confidence 1223458999999999998899999999999999999999999995311 0000111111111000
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMS 392 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 392 (447)
..........+.+++..||+.||.+|||+.
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 222 --EVYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred --cccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 011122344578899999999999999943
No 243
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2e-38 Score=331.03 Aligned_cols=258 Identities=21% Similarity=0.323 Sum_probs=198.7
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecC--Ccc
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TER 194 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 194 (447)
...++|++.+.||+|+||+||++... ++..+|+|.+..... ......+..|+.++..++||||+++++++... ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34568999999999999999999976 577899999865432 22345688999999999999999999988643 457
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCceecCCCCCCEEECC---------
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD----PKIIHRDVKAANILLDE--------- 261 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~----~~ivH~dlk~~Nill~~--------- 261 (447)
++||||+.+|+|.++|.........+++..++.|+.||+.||.|||+... .+|+||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 89999999999999997654334469999999999999999999998521 25999999999999964
Q ss_pred --------CCcEEEeecCCccccCCCCCceeeccccccCccccccccC--CCCCchhhhHHHHHHHHHHHhCCCCccccc
Q 013238 262 --------EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLAR 331 (447)
Q Consensus 262 --------~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltg~~p~~~~~ 331 (447)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++||||||||||||+||+.||....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 2348999999998653222 2233468999999999854 458899999999999999999999995311
Q ss_pred ccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 332 LANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
....++..+.... .+. .......+.++|..||+.+|.+|||+.+++.
T Consensus 248 -------~~~qli~~lk~~p--------~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 -------NFSQLISELKRGP--------DLP---IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred -------cHHHHHHHHhcCC--------CCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 1122222211111 000 0112356889999999999999999999984
No 244
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-38 Score=300.58 Aligned_cols=249 Identities=18% Similarity=0.309 Sum_probs=199.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
.+|+..+.||.|++|.||+|... +++.|++|.+..... .....+.+|+++++.++|+|++++++++......++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 46888899999999999999864 689999999865432 2345678899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+++|..++... .+++..+..++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 98 LAGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred cCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 9999999988643 388999999999999999999999 99999999999999999999999999987654322
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.. .....++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ........... ...
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~--------~~~~~~~~~~~-~~~----- 234 (296)
T cd06655 170 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP--------LRALYLIATNG-TPE----- 234 (296)
T ss_pred cc-CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcC-Ccc-----
Confidence 21 2234578899999999988899999999999999999999999953211 01111111000 000
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..........+.+++.+||..+|.+|||+.+++.
T Consensus 235 --~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 --LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0111223456888999999999999999999885
No 245
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-38 Score=311.20 Aligned_cols=262 Identities=22% Similarity=0.265 Sum_probs=196.5
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
...+|++.+.||+|+||.||++... .+..||+|.+.... ...+|+++++.++|+||+++++++......++
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------TPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 3467999999999999999999753 35789999886432 34689999999999999999999998889999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+||++. ++|..++... ..+++..++.++.||+.||.|||++ +|+||||||+|||++.++.++|+|||+++..
T Consensus 164 v~e~~~-~~l~~~l~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRS----GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EehhcC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999995 6888888432 3489999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 277 DYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 277 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
...... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... ....+...++.+ ......-
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~l~~i~~~~-~~~~~~~ 313 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS-SSSQLRSIIRCM-QVHPLEF 313 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC-cHHHHHHHHHHh-ccCcccc
Confidence 433221 2223468999999999999999999999999999999999999995422111 011111111110 0000000
Q ss_pred c-------------cccccCCCCc-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 356 L-------------VDSDMEGNYI-------EEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 356 ~-------------~d~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. .......... ......+.+++.+||..||++|||+.+++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0000000000 0123457789999999999999999999875
No 246
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4e-38 Score=292.86 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=199.1
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeec-CCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 199 (447)
.|+..+.||+|++|.||++... +++.+|+|.+..... ......+.+|++++++++|+|++++.+.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778899999999999999876 578899999865432 2334467889999999999999999988764 345789999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++.... ..++++..++.++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999999999987642 23489999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
. .......++..|+|||++.+..++.++||||||+++++|++|+.||.... ........... ..
T Consensus 156 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~--------~~~~~~~~~~~-~~------ 219 (257)
T cd08223 156 C-DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD--------MNSLVYRIIEG-KL------ 219 (257)
T ss_pred C-CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhc-CC------
Confidence 2 22233457889999999999999999999999999999999999985311 11111111111 10
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
..........+.+++.+||+.+|.+|||+.++++.
T Consensus 220 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 ---PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11122344678999999999999999999999863
No 247
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.9e-38 Score=293.00 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=192.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc----cchHHHHHHHHHHHHhcCCCceeeEeeeeecC--Ccc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT----QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 194 (447)
.+|+..+.||+|+||.||+|... ++..|++|.+..... ......+.+|+.+++.++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888899999999999999875 588999999864321 12234578899999999999999999988653 567
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++++||+++++|.+++.... .+++...+.++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 89999999999999987543 378899999999999999999998 99999999999999999999999999987
Q ss_pred ccCCCC--CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 275 LMDYKD--THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 275 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
...... ........++..|+|||++.+..++.++|||||||++|||++|+.||.... ....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~--------~~~~~~~~~~--- 223 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE--------AMAAIFKIAT--- 223 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc--------hHHHHHHHhc---
Confidence 653211 111122347889999999998889999999999999999999999995311 0111111100
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.......+......+.+++ .||..+|.+|||+++|++
T Consensus 224 ------~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 224 ------QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ------CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0011111222334455555 688899999999999975
No 248
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.8e-38 Score=298.83 Aligned_cols=255 Identities=21% Similarity=0.342 Sum_probs=200.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||+|+||.||++... ++..||+|.+...........+.+|++++++++|+||+++++.+...+..+++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35778899999999999999976 68999999987544333445788999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|..++.... ....+++..+..++.+++.||.|||+.+ +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 99999998887532 1235899999999999999999999632 89999999999999999999999999987543221
Q ss_pred CceeeccccccCccccccccCCC------CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGK------SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||.... ............
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~------ 223 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET-----YANIFAQLSAIV------ 223 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc-----hhhHHHHHHHHh------
Confidence 12234788999999986543 4789999999999999999999995311 111111111111
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+. ............+.+++.+||+.+|.+||++.+++..
T Consensus 224 ---~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 224 ---DG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred ---hc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 10 0111223355678899999999999999999999873
No 249
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1e-37 Score=299.53 Aligned_cols=196 Identities=23% Similarity=0.373 Sum_probs=159.0
Q ss_pred CCeeeecCCeEEEEEEEC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeec--CCcceEEEecc
Q 013238 127 RNILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPFM 201 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 201 (447)
.++||+|+||+||+|... +++.+|+|.+..... ...+.+|+++++.++||||+++++++.. ....+++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 357999999999999864 467899999865322 2356789999999999999999998864 34578999998
Q ss_pred cCCcchhhhhhcCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEE----CCCCcEEEeecCC
Q 013238 202 VNGSVASCLRERGQ-----SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGL 272 (447)
Q Consensus 202 ~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl 272 (447)
. ++|..++..... ....+++..++.++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 5 588777654321 123488999999999999999999999 99999999999999 4667899999999
Q ss_pred ccccCCCCC--ceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 273 AKLMDYKDT--HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 273 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 986543221 122334689999999998774 589999999999999999999999963
No 250
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.6e-38 Score=294.55 Aligned_cols=254 Identities=25% Similarity=0.368 Sum_probs=203.7
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
+|+..+.||+|++|.||++... +++.+|+|.+...........+.+|+++++.++|+||+++++.+...+..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677788999999999999986 588999999976654455567889999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
.+++|.+++.... .++++..+..++.+++.||+|||+ . +++|+||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 82 DGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred CCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 9999999997653 358899999999999999999999 8 99999999999999999999999999987543221
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.. ...++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.+........ +.
T Consensus 156 ~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~------~~ 223 (265)
T cd06605 156 AK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEND---PPDGIFELLQYIVNEPP------PR 223 (265)
T ss_pred hh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccc---ccccHHHHHHHHhcCCC------CC
Confidence 11 14578899999999999999999999999999999999999953211 11112222222211110 00
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+ ........+.+++.+||..+|.+|||+.+++..
T Consensus 224 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 224 L---PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred C---ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1 011145568899999999999999999998753
No 251
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.9e-38 Score=296.72 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=197.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.+.|++.+.||+|+||.||+|... ++..+++|.+.... ......+.+|+++++.++|+|++++++.+......++|||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 357888999999999999999976 48899999986542 2334568889999999999999999999998899999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|..++.+... .+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 90 ~~~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 90 FCPGGAVDAIMLELDR---GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred cCCCCcHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999888765432 389999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.. ......++..|+|||++. ...++.++|||||||++|||++|..||.... .............
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~-- 232 (292)
T cd06644 164 LQ-RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSEP-- 232 (292)
T ss_pred cc-ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc--------HHHHHHHHhcCCC--
Confidence 11 122334788999999985 3446889999999999999999999985311 0111111111100
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+.. .........+.+++.+||+.+|++||++.++++
T Consensus 233 ----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 ----PTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ----ccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 111223346889999999999999999999976
No 252
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.9e-38 Score=292.52 Aligned_cols=238 Identities=24% Similarity=0.382 Sum_probs=187.9
Q ss_pred CeeeecCCeEEEEEEECCCc-----------EEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 128 NILGRGGFGKVYKGRLTDGS-----------LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
+.||+|+||.||+|...+.. .+++|.+...... ...+.+|+.+++.++|+||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 46899999999999976422 5788877544322 4578899999999999999999999988 77899
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC-------cEEEee
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-------EAVVGD 269 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~-------~~kl~D 269 (447)
||||+.+|+|.+++..... .+++..+..++.||+.||+|||++ +++||||||+||+++.++ .+||+|
T Consensus 78 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 9999999999999976542 488999999999999999999999 999999999999999888 799999
Q ss_pred cCCccccCCCCCceeeccccccCccccccccCC--CCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHH
Q 013238 270 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 270 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||..... ..+...
T Consensus 152 fg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--------~~~~~~ 218 (259)
T cd05037 152 PGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--------SEKERF 218 (259)
T ss_pred CCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--------hhHHHH
Confidence 999986533 1223467789999999876 78999999999999999999 5777743210 011111
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
..... .... .....+.+++.+||..+|.+|||+.++++.|+
T Consensus 219 ~~~~~--------~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 219 YQDQH--------RLPM----PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HhcCC--------CCCC----CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 10000 0000 01167889999999999999999999999874
No 253
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.4e-38 Score=293.28 Aligned_cols=250 Identities=20% Similarity=0.315 Sum_probs=201.1
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|+||.+|++... +|+.||+|.+..... ......+.+|+++++.++|+||+++.+++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778899999999999999875 688999999865422 22344688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+.+++|.+++..... ..+++..++.++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 999999998875432 2478999999999999999999999 99999999999999999999999999997654322
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
. ......|+..|+|||++.+...+.++|+||||+++++|++|+.||.... ..+.+.......
T Consensus 156 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~~~~--------- 217 (256)
T cd08218 156 E-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN--------MKNLVLKIIRGS--------- 217 (256)
T ss_pred h-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC--------HHHHHHHHhcCC---------
Confidence 1 1122347888999999998889999999999999999999999985311 112222211111
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...........+.+++.+||+.+|.+||++.+|++
T Consensus 218 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 218 -YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 01112233556899999999999999999999987
No 254
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.1e-38 Score=318.56 Aligned_cols=202 Identities=23% Similarity=0.338 Sum_probs=162.7
Q ss_pred HHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC------CCceeeEeee
Q 013238 115 RELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV------HRNLLRLRGF 187 (447)
Q Consensus 115 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~ 187 (447)
+++....++|++.++||+|+||+||+|... +++.||||+++.... ....+..|++++..++ |.+++.++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 334556788999999999999999999875 578899999964321 1223455666666654 4458888888
Q ss_pred eecC-CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC---
Q 013238 188 CMTP-TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF--- 263 (447)
Q Consensus 188 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~--- 263 (447)
+... ...++||+++ +++|.+++...+ .+++..++.|+.||+.||.|||+++ +|+||||||+|||++.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMKHG----PFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCccc
Confidence 8764 4678999988 778888886543 4899999999999999999999732 899999999999998765
Q ss_pred -------------cEEEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 264 -------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 264 -------------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
.+||+|||.+.... .......||..|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 49999999876422 122345689999999999999999999999999999999999999964
No 255
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.5e-38 Score=298.97 Aligned_cols=263 Identities=25% Similarity=0.330 Sum_probs=201.0
Q ss_pred CHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeec
Q 013238 113 SLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 190 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 190 (447)
.+.++..+.++|...+.||+|+||.||++... +++.+|+|.+.... .....+.+|+.++.++ +|+|++++++++..
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 33444556788999999999999999999875 68899999986432 2234577888888888 79999999999875
Q ss_pred C-----CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcE
Q 013238 191 P-----TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 265 (447)
Q Consensus 191 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~ 265 (447)
. ...++||||+++++|.++++........+++..++.++.|++.||.|||+. +++|+||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 3 357899999999999998875433344589999999999999999999999 99999999999999999999
Q ss_pred EEeecCCccccCCCCCceeeccccccCccccccccCC-----CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccH
Q 013238 266 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 340 (447)
Q Consensus 266 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~ 340 (447)
||+|||++......... .....++..|+|||++... .++.++|||||||++|||++|+.||.... .
T Consensus 168 kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~--------~ 238 (291)
T cd06639 168 KLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH--------P 238 (291)
T ss_pred EEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc--------H
Confidence 99999998765432211 1223578899999987543 36889999999999999999999985311 0
Q ss_pred HHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 341 LDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 341 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
..-+...... ....+ .........+.+++.+||+.+|++||++.++++.
T Consensus 239 ~~~~~~~~~~-~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 239 VKTLFKIPRN-PPPTL-------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHHHHHhcC-CCCCC-------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0111111100 00001 0112234568999999999999999999999863
No 256
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1e-37 Score=291.69 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=203.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||.|++|+||+|... ++..+++|++...........+.+|++.++.++|+|++++++.+...+..+++||+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999865 57899999997654444556789999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++..... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999976432 12489999999999999999999999 99999999999999999999999999987654332
Q ss_pred Cc---eeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 281 TH---VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 281 ~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.. ......|+..|+|||++... .++.++|+||||+++|+|++|+.||..... ..... .....
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~----~~~~~----~~~~~------ 222 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP----MKVLM----LTLQN------ 222 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh----hhhHH----HHhcC------
Confidence 22 12233578899999998777 789999999999999999999999953211 00011 11110
Q ss_pred cccccCCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 357 VDSDMEGN-YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 357 ~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
........ ........+.+++.+||+.||.+|||+.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00111111 11234566889999999999999999999986
No 257
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=8.1e-38 Score=294.35 Aligned_cols=248 Identities=25% Similarity=0.380 Sum_probs=199.4
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
-|...+.||+|+||.||+|... ++..+|+|.+...........+.+|++.+..++|+||+++++++......++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667788999999999999865 688999999865443344456888999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+++|..++... .+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 85 GGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 999999988642 388999999999999999999999 999999999999999999999999999876543221
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
......++..|+|||.+.+..++.++||||||+++|+|++|..||.... .......... ..
T Consensus 157 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~-~~--------- 217 (277)
T cd06641 157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH--------PMKVLFLIPK-NN--------- 217 (277)
T ss_pred -hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc--------hHHHHHHHhc-CC---------
Confidence 1222357889999999988888999999999999999999999985311 1111111110 00
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
...........+.+++.+||+.+|.+||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011112234568899999999999999999999984
No 258
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.3e-38 Score=301.95 Aligned_cols=257 Identities=24% Similarity=0.283 Sum_probs=199.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|++|.||++... +++.+|+|.+....... ....+..|+++++.++|+||+++++.+......+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36788899999999999999876 48999999997643322 3446888999999999999999999999989999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+++|.+++.... ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 9999999999987542 23589999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCc----------------------------eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccc
Q 013238 279 KDTH----------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 330 (447)
Q Consensus 279 ~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~ 330 (447)
.... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2110 011234788999999999888999999999999999999999999532
Q ss_pred cccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 331 RLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.. . ..... +.+..............+.+++.+||+.+|.+|||....++.+..
T Consensus 236 ~~----~----~~~~~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 236 NR----D----ETFSN---------ILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ch----H----HHHHH---------HhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 11 0 00011 111111111111145679999999999999999994444443333
No 259
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.1e-38 Score=294.89 Aligned_cols=255 Identities=26% Similarity=0.353 Sum_probs=199.1
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecCC-----
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPT----- 192 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~----- 192 (447)
++++|+..+.||+|++|.||+|... +++.+++|.+..... ....+.+|+++++++ .|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4678999999999999999999985 578999999865432 234688999999998 6999999999987644
Q ss_pred -cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 193 -ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 193 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
..+++|||+++++|.+++.........+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 37999999999999999876543334589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccC-----CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
++........ ......++..|+|||++.. ..++.++||||||+++|+|++|+.||.... .. .....
T Consensus 159 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~----~~~~~ 229 (275)
T cd06608 159 VSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH----PM----RALFK 229 (275)
T ss_pred cceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc----hH----HHHHH
Confidence 9876533222 1223447889999998754 346788999999999999999999995211 00 00111
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... .. . ...........+.+++.+||..||++|||+.++++
T Consensus 230 ~~~~-~~-----~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 230 IPRN-PP-----P--TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhcc-CC-----C--CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1110 00 0 01112224567889999999999999999999986
No 260
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.6e-38 Score=295.51 Aligned_cols=239 Identities=25% Similarity=0.367 Sum_probs=184.0
Q ss_pred eeeecCCeEEEEEEECC-------------------------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceee
Q 013238 129 ILGRGGFGKVYKGRLTD-------------------------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 183 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 183 (447)
.||+|+||.||+|.... ...|++|.+..... .....+.+|+.+++.++|+||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 59999999999997421 23588998865432 23346778899999999999999
Q ss_pred EeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC
Q 013238 184 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 263 (447)
Q Consensus 184 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~ 263 (447)
+++++......++||||+++|+|..++..... .+++..+..++.|++.||+|||++ +++||||||+|||++..+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG---RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 99999999999999999999999998865322 478999999999999999999999 999999999999997644
Q ss_pred -------cEEEeecCCccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHH-hCCCCcccccccC
Q 013238 264 -------EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELI-TGQRAFDLARLAN 334 (447)
Q Consensus 264 -------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~ell-tg~~p~~~~~~~~ 334 (447)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.....
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-- 227 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP-- 227 (274)
T ss_pred cccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--
Confidence 3899999988643221 11246788999998865 56799999999999999985 69999853110
Q ss_pred CCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 335 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
.....+ .... ..... .....+.+++.+||+.+|.+|||+.++++.|.
T Consensus 228 ---~~~~~~----~~~~-------~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 228 ---SEKERF----YEKK-------HRLPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ---HHHHHH----HHhc-------cCCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 011111 1100 00111 11235889999999999999999999999874
No 261
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.1e-38 Score=295.43 Aligned_cols=253 Identities=23% Similarity=0.328 Sum_probs=196.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|...+.||+|+||.||+|... +++.||+|.++.... .....+.+|+.+++.++||||+++++++...+..+++||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 346777788999999999999865 588999999865432 223457789999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++...+ .+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 87 FCGGGSLQDIYHVTG----PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred ccCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 999999999986543 489999999999999999999999 9999999999999999999999999998765422
Q ss_pred CCceeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.. ......|+..|+|||++. ...++.++|||||||++|+|++|..||..... ... +....... .
T Consensus 160 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~----~~~----~~~~~~~~----~ 226 (267)
T cd06645 160 IA-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP----MRA----LFLMTKSN----F 226 (267)
T ss_pred cc-ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc----hhh----HHhhhccC----C
Confidence 21 122345889999999874 45678899999999999999999999842110 000 00000000 0
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+.... .......+.+++.+||+.+|++|||+.++++
T Consensus 227 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 227 QPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000000 0112345889999999999999999999875
No 262
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7.6e-38 Score=303.73 Aligned_cols=260 Identities=22% Similarity=0.273 Sum_probs=192.7
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecC-----
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP----- 191 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 191 (447)
...++|...+.||+|+||.||+|... +++.||||.+...... .....+.+|+++++.++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578999999999999999999865 6789999998654322 2234577899999999999999999887532
Q ss_pred -CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 192 -TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 192 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
...+++++++ +++|..++... .+++..++.++.|++.||.|||++ +|+||||||+|||+++++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ-----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468999988 78888877532 389999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 349 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
|+++..... .....|+..|+|||++.+ ..++.++|||||||++|+|++|+.||..... ...+..+. ....
T Consensus 163 g~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~-~~~~ 233 (343)
T cd07878 163 GLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY----IDQLKRIM-EVVG 233 (343)
T ss_pred ccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH----HHHHHHHH-HHhC
Confidence 999865432 223458999999999876 5689999999999999999999999953210 00000000 0000
Q ss_pred ccc-----------ccccccc--ccCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 EKK-----------LEQLVDS--DMEGN----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 ~~~-----------~~~~~d~--~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
... ....... ..... ........+.+++.+||+.||.+|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 234 TPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000000 00000 00011234779999999999999999999986
No 263
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=8.2e-38 Score=290.76 Aligned_cols=248 Identities=27% Similarity=0.413 Sum_probs=198.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc----cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT----QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
+|+..+.||+|++|.||+|... +++.|++|.+..... ......+.+|+++++.++|+|++++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677789999999999999976 789999999864321 22345688999999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
+||+++++|.+++.... ++++..++.++.+++.||+|||+. +++|+||+|+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999999987542 488999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCceeeccccccCccccccccCCC-CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
... ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||.... ..............
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~--- 220 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE--------GVAAVFKIGRSKEL--- 220 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc--------HHHHHHHHHhcccC---
Confidence 322 223345788999999987766 8999999999999999999999995321 11111111110000
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..........+.+++.+||+.+|.+|||+.++++
T Consensus 221 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1111223456888999999999999999999875
No 264
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.8e-38 Score=295.21 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=194.7
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEeccc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 202 (447)
|+..+.||+|+||.||++... ++..+++|.+.... ......+.+|+++++.++|+|++++++++......+++|||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 566788999999999999976 47788999885432 2334468889999999999999999999999999999999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
+++|..++.... .++++..+..++.|+++||.|||+. +++||||||+||+++.++.+||+|||++....... .
T Consensus 86 ~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~ 158 (282)
T cd06643 86 GGAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-Q 158 (282)
T ss_pred CCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-c
Confidence 999988876532 2489999999999999999999999 99999999999999999999999999987543221 1
Q ss_pred eeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 283 VTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
......++..|+|||++. +..++.++|||||||++|||++|+.||.... ....+......... ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~~~-~~- 228 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSEPP-TL- 228 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC--------HHHHHHHHhhcCCC-CC-
Confidence 122345888999999884 3456789999999999999999999985311 11111111111000 00
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.........+.+++.+||+.+|.+|||+.++++.
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 ------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111234568899999999999999999988753
No 265
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.7e-38 Score=296.39 Aligned_cols=253 Identities=24% Similarity=0.352 Sum_probs=199.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|++.+.||.|++|.||++... ++..+|+|.+.... ......+..|++++++++|+||+++++++......++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 456888889999999999999875 58899999986542 2234468889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++.... .++++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 83 FCDGGALDSIMLELE---RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred ccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 999999999987643 2489999999999999999999999 9999999999999999999999999998754332
Q ss_pred CCceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
... .....++..|+|||.+. ...++.++||||||+++|||++|+.||.... .............
T Consensus 157 ~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~-- 225 (280)
T cd06611 157 LQK-RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN--------PMRVLLKILKSEP-- 225 (280)
T ss_pred ccc-cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC--------HHHHHHHHhcCCC--
Confidence 221 22334788999999875 3456789999999999999999999995321 1111111111000
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+.+ .........+.+++..||+.+|.+||++.++++.
T Consensus 226 ----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 ----PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000 1112234568899999999999999999999874
No 266
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-37 Score=294.47 Aligned_cols=263 Identities=23% Similarity=0.294 Sum_probs=197.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|+..+.||+|++|.||+|... +|+.||+|++..... ......+.+|+++++.++|+|++++++++......+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999986 589999999865432 2233457889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|..++.... .+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988887765432 389999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHH----------h
Q 013238 280 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL----------L 348 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------~ 348 (447)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||..... ........... .
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD----VDQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCChHHhhhc
Confidence 21 1222347788999999876 4578999999999999999999999953211 00011110000 0
Q ss_pred hccc-cccccccccCCCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 349 KEKK-LEQLVDSDMEGNY-----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 349 ~~~~-~~~~~d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... ......+...... .......+.+++.+||+.+|++|||+.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000 0000000000000 1122466889999999999999999999875
No 267
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.5e-37 Score=294.57 Aligned_cols=263 Identities=24% Similarity=0.350 Sum_probs=195.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
++|+..+.||+|++|.||+|... +++.||||.+...........+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888899999999999999976 68899999987544333334567899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. ++|.+++..... .+++..++.++.|+++||.|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~~~---~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LD-TDLKQYMDDCGG---GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CC-CCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 97 489888865432 488999999999999999999999 99999999999999999999999999987543221
Q ss_pred CceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc---ccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK---KLEQL 356 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 356 (447)
. ......++..|+|||++.+ ..++.++||||||+++|+|++|+.||..... ............... .....
T Consensus 158 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD----VEDQLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred c-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc----HHHHHHHHHHhcCCCChhhhhhh
Confidence 1 1122236788999999875 4578999999999999999999999953210 000110000000000 00000
Q ss_pred ------ccccc---CCC----C--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 357 ------VDSDM---EGN----Y--IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 357 ------~d~~~---~~~----~--~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..... ... . .......+.+++.+||+.+|.+|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000 000 0 0001256789999999999999999999875
No 268
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.4e-37 Score=290.67 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=194.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc----cchHHHHHHHHHHHHhcCCCceeeEeeeeecC--Ccc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT----QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 194 (447)
.+|+..+.||+|+||.||++... ++..||||.+..... ......+.+|+.+++.++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999875 588999998854321 12234678899999999999999999987664 456
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
+++|||+++++|.+++.... .+++...+.++.+++.||+|||++ +++|+||||+||+++.++.++|+|||++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG----ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 79999999999999987543 378888999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCC--ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 275 LMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 275 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
....... .......++..|+|||++.+..++.++||||||+++|||++|+.||.... ..... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-------~~~~~-~~~~---- 222 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE-------AMAAI-FKIA---- 222 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc-------hHHHH-HHHh----
Confidence 5432111 11223457889999999988889999999999999999999999995310 00110 1110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
........+......+.+++.+||. +|.+||+++++++.
T Consensus 223 -----~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 223 -----TQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred -----cCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0011112233445567788888985 99999999998863
No 269
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.7e-37 Score=293.29 Aligned_cols=263 Identities=23% Similarity=0.330 Sum_probs=200.9
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|++.+.||+|++|.||+|... +|+.||+|++..... ......+.+|+.+++.++|+|++++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4777889999999999999975 689999999875543 23345788999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+ +++|.+++.... .++++..++.++.||++||+|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 999999987543 3489999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc-------
Q 013238 281 THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK------- 352 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 352 (447)
........++..|+|||.+.+. .++.++||||||+++|||++|..+|... .................
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE-----NDIEQLAIVFRTLGTPNEETWPGL 228 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC-----CHHHHHHHHHHHcCCCChHHHhhc
Confidence 2223334588899999998654 4689999999999999999998777431 11111111111111000
Q ss_pred -----cccccccccCC----CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 353 -----LEQLVDSDMEG----NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 353 -----~~~~~d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
...+....... ....+....+.+++.+||+.+|.+|||++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000000 0011234778999999999999999999999863
No 270
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=307.89 Aligned_cols=245 Identities=30% Similarity=0.423 Sum_probs=197.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.|..++.||.|+||.||.|.+. +.+.||||++.-...... -.++..|+..|..++|||.|.+.|+|......|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4777788999999999999865 688999999964433222 2368899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|| -|+-.+++.-.. .|+.+..+..|..+.++||+|||++ +.||||||..|||+++.|.|||+|||.+....+.
T Consensus 107 YC-lGSAsDlleVhk---KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HH-hccHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 99 557778776654 3589999999999999999999999 9999999999999999999999999999766543
Q ss_pred CCceeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
..++||+.|||||++. .+.|+-++|||||||+..||.-.++|+=..+ -+..++. +.+-
T Consensus 180 -----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-----------AMSALYH---IAQN 240 (948)
T KOG0577|consen 180 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----------AMSALYH---IAQN 240 (948)
T ss_pred -----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-----------HHHHHHH---HHhc
Confidence 3467999999999884 5789999999999999999999999962211 0111111 1111
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
-.+.+. ..+-...+..++..||++-|.+|||..++++
T Consensus 241 esPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 241 ESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 112222 3344566888999999999999999988776
No 271
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.5e-38 Score=296.50 Aligned_cols=262 Identities=21% Similarity=0.305 Sum_probs=194.2
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|++|.||+|... +|+.+|+|.+..... ......+.+|+++++.++|+|++++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999976 688999999865322 22234577899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. ++|.+++.... ..+++..++.++.||++||.|||+. +++|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CD-QDLKKYFDSCN---GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 96 57877776432 2489999999999999999999999 99999999999999999999999999997654322
Q ss_pred CceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc------c
Q 013238 281 THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK------L 353 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 353 (447)
. ......++..|+|||++.+. .++.++|||||||++|||+||..|+.... ................. .
T Consensus 154 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 154 R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred C-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCC----CHHHHHHHHHHHhCCCChHHhHHh
Confidence 1 12233478899999998765 46899999999999999999999863211 10001111100000000 0
Q ss_pred cccccc----ccCC-----CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 354 EQLVDS----DMEG-----NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 354 ~~~~d~----~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.+..+. .... .........+.+++.+||+.||.+|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000 0000 011123456789999999999999999999876
No 272
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-37 Score=292.66 Aligned_cols=248 Identities=24% Similarity=0.420 Sum_probs=197.7
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC---CCceeeEeeeeecCCcceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 198 (447)
.|+..+.||+|+||.||+|... +++.+|+|.+...........+.+|+++++.+. |+|++++++++......+++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4677789999999999999974 689999999876544444556888999998886 999999999999888999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++... ++++..++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 999999999988643 489999999999999999999999 999999999999999999999999999986654
Q ss_pred CCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.... .....|+..|+|||.+.++ .++.++||||||+++|+|++|..||..... ...... .... .
T Consensus 154 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--------~~~~~~-~~~~-----~ 218 (277)
T cd06917 154 NSSK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA--------FRAMML-IPKS-----K 218 (277)
T ss_pred Cccc-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh--------hhhhhc-cccC-----C
Confidence 3322 2233588899999988654 468899999999999999999999953211 111100 0000 0
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.+.+... .....+.+++.+||+.||.+||++.+++.
T Consensus 219 ~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 219 PPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0111111 13456889999999999999999999986
No 273
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=9.8e-38 Score=292.98 Aligned_cols=257 Identities=26% Similarity=0.408 Sum_probs=196.4
Q ss_pred CCCCCeeeecCCeEEEEEEEC----CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC------
Q 013238 124 FSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ 192 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 192 (447)
|.+.+.||+|+||.||+|... +++.||||.+..... ......+.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556788999999999999854 368899999975432 223446888999999999999999999886532
Q ss_pred cceEEEecccCCcchhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQ--SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
..+++++|+.+|+|..++..... ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 23688999999999888754321 122478899999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHh
Q 013238 271 GLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 271 gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
|+++........ ......++..|++||.+.+..++.++||||||+++|||++ |+.||.... ......+ ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~-----~~~~~~~---~~ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE-----NSEIYNY---LI 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC-----HHHHHHH---HH
Confidence 999865432211 1122235678999999988889999999999999999999 888885311 1111111 11
Q ss_pred hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 349 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 349 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
..... .........+.+++.+||+.+|.+|||+.++++.|+++
T Consensus 230 ~~~~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KGNRL----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11110 01112345799999999999999999999999999864
No 274
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.4e-38 Score=294.79 Aligned_cols=240 Identities=23% Similarity=0.354 Sum_probs=186.1
Q ss_pred CeeeecCCeEEEEEEECC--------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 128 NILGRGGFGKVYKGRLTD--------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+.||+|+||.||+|.... ...+++|.+.... ......+..|..+++.+.|||++++++++......++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 369999999999998642 2348888875432 2233467889999999999999999999999889999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc--------EEEeecC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE--------AVVGDFG 271 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~Dfg 271 (447)
|+.+|+|..++..... .+++..++.++.||+.||+|||+. +++||||||+||+++.++. ++++|||
T Consensus 80 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 80 YVKFGSLDTYLKKNKN---LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred cCCCCcHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999999976532 488999999999999999999999 9999999999999987765 6899999
Q ss_pred CccccCCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCC-CCcccccccCCCcccHHHHHHHHhh
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQ-RAFDLARLANDDDVMLLDWVKGLLK 349 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
++...... ....++..|+|||++.+. .++.++||||||+++|||++|. .|+.... ..... ....
T Consensus 154 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~--------~~~~~-~~~~ 219 (258)
T cd05078 154 ISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD--------SQKKL-QFYE 219 (258)
T ss_pred cccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc--------HHHHH-HHHH
Confidence 88654321 223478899999999764 5789999999999999999985 5553210 00110 0111
Q ss_pred ccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 350 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 350 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
. . ...+......+.+++.+||+.+|++|||++++++.|+
T Consensus 220 ~---------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 D---------R--HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred c---------c--ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0 0111112356889999999999999999999999874
No 275
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.2e-37 Score=290.51 Aligned_cols=255 Identities=24% Similarity=0.408 Sum_probs=197.1
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc---------chHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ---------GGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 192 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 192 (447)
+|...+.||+|++|.||+|... +|+.+|+|.++..... .....+..|+++++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667789999999999999865 6889999988542211 11235778999999999999999999999999
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..++||||+.+++|.+++.... ++++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 9999999999999999987652 488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-ceeeccccccCccccccccCCC--CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh
Q 013238 273 AKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 349 (447)
Q Consensus 273 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
++....... .......++..|+|||.+.... ++.++|+||||+++||+++|..||.... ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~ 226 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE--------AIAAMFKLGN 226 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc--------hHHHHHHhhc
Confidence 976432211 1122345788999999987654 7899999999999999999999984211 0111111111
Q ss_pred ccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 350 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 350 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.. ................+.+++.+||+.+|.+|||+.++++.
T Consensus 227 ~~-----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 227 KR-----SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cc-----cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00 00111111112335678899999999999999999999863
No 276
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.2e-38 Score=307.67 Aligned_cols=237 Identities=23% Similarity=0.266 Sum_probs=181.6
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhc---CCCceeeEeeeeecCCcceEEEecccC
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMA---VHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
||+|+||+||+|... +++.||||++...... .....+..|..++... .||||+++++++......++||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999876 5899999998643221 1122344566666554 699999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|..++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.++|+|||+++...... ..
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~ 152 (330)
T cd05586 81 GELFWHLQKEG----RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KT 152 (330)
T ss_pred ChHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CC
Confidence 99998886543 388999999999999999999999 99999999999999999999999999987533222 22
Q ss_pred eeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 284 TTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
.....||..|+|||++.+. .++.++|||||||++|||++|+.||.... ............ ..+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~--------~~~~~~~i~~~~-------~~~~ 217 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED--------TQQMYRNIAFGK-------VRFP 217 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC--------HHHHHHHHHcCC-------CCCC
Confidence 2345689999999998765 47899999999999999999999995311 111111111100 0111
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMS 392 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 392 (447)
. ......+.+++.+||+.||.+||++.
T Consensus 218 ~---~~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 218 K---NVLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred C---ccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 1 11234578899999999999999543
No 277
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=297.01 Aligned_cols=249 Identities=22% Similarity=0.326 Sum_probs=210.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+-|...+.||+|.|.+|-+|++- +|..||||++.+..... ....+.+|+..|+..+|||||++|++......+|+|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 45777788999999999999853 79999999998765433 34468899999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC-CCCcEEEeecCCccccCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~ 278 (447)
.-.+|+|.+++-.+.. .+.+....+++.||+.|+.|+|.. .+|||||||+||.+. +-|-+||+|||++..+.+
T Consensus 98 LGD~GDl~DyImKHe~---Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE---GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhhhc---cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 9999999999977643 389999999999999999999999 999999999999775 568899999999976543
Q ss_pred CCCceeeccccccCccccccccCCCCC-chhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSS-EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
+......+|+..|-|||++.+..|+ ++.||||||||||.|++|+.||+..+ +.+.+.-++
T Consensus 172 --G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN-----------------DSETLTmIm 232 (864)
T KOG4717|consen 172 --GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN-----------------DSETLTMIM 232 (864)
T ss_pred --cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc-----------------chhhhhhhh
Confidence 4445566899999999999998885 68899999999999999999997432 123344445
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
|... ..+.....++.++|..||..||++|.|.++++..
T Consensus 233 DCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 233 DCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred cccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 5432 4456677889999999999999999999998764
No 278
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.1e-38 Score=295.96 Aligned_cols=262 Identities=23% Similarity=0.363 Sum_probs=197.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|+..+.||+|++|.||+|... +++.||+|.+....... ....+.+|+++++.++|+||+++++++......+++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36788899999999999999986 58899999986543222 34467889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+.+++|..+.... ..+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKYP----NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 99998888776543 2389999999999999999999999 9999999999999999999999999998765433
Q ss_pred CCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHH-----------
Q 013238 280 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL----------- 347 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------- 347 (447)
. .......++..|+|||++.+ ..++.++||||||+++|||++|+.||.... ......-....
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 154 G-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS-----DIDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred c-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc-----hHHHHHHHHHHhCCCchhhHHH
Confidence 2 22223347889999999875 457889999999999999999999985311 00000000000
Q ss_pred hhccc-cccccccccCC-----CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 348 LKEKK-LEQLVDSDMEG-----NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 348 ~~~~~-~~~~~d~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..... ......+.... .........+.+++.+||+.+|.+|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000 00000000000 001123467899999999999999999999875
No 279
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.5e-37 Score=292.14 Aligned_cols=265 Identities=23% Similarity=0.279 Sum_probs=194.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+++|...+.||+|+||.||+|... +++.||+|.+...........+.+|+++++.++|+||+++.+++......+++||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 467888999999999999999875 5889999999755444444467789999999999999999999998889999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+. ++|.+++.... ..+.+..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 84 YMH-TDLAQYMIQHP---GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred ccc-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 995 67776665432 2377888899999999999999999 9999999999999999999999999998754322
Q ss_pred CCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHH-----------HH
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK-----------GL 347 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~~ 347 (447)
.. ......++..|+|||++.+. .++.++||||||+++|||++|+.||+..... ...+...+. ..
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07870 157 SQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV---FEQLEKIWTVLGVPTEDTWPGV 232 (291)
T ss_pred CC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHHHHHHcCCCChhhhhhh
Confidence 11 12223468899999998764 5788999999999999999999999632110 000000000 00
Q ss_pred hhccccccccccccCCCC------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 348 LKEKKLEQLVDSDMEGNY------IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 348 ~~~~~~~~~~d~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.................. .......+.+++.+|++.||.+|||+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000000 0011346788999999999999999999874
No 280
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-37 Score=289.01 Aligned_cols=252 Identities=24% Similarity=0.387 Sum_probs=205.4
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
+|+..+.||+|++|.||+|... +++.|+||++...........+.+|++.+..++|+|++++++++......+++|||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 6788899999999999999987 489999999976544344567889999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
++++|.+++... .++++..++.++.|+++||+|||+ . +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 82 DGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 999999999764 348999999999999999999999 8 99999999999999999999999999998664333
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ....+.........
T Consensus 155 ~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~--------- 219 (264)
T cd06623 155 DQC-NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDGP--------- 219 (264)
T ss_pred Ccc-cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcCC---------
Confidence 221 233478899999999998999999999999999999999999954211 11122222211110
Q ss_pred cCCCCcHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 361 MEGNYIEE-EVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 361 ~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. ...... ....+.+++.+||+.+|.+|||+.++++.
T Consensus 220 ~-~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 220 P-PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred C-CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 111112 45679999999999999999999999873
No 281
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-37 Score=289.00 Aligned_cols=249 Identities=26% Similarity=0.425 Sum_probs=198.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|++|.||++... +++.+|+|.+..... ......+.+|+++++.++|+|++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999875 688999999865432 22345688999999999999999999999888899999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEeecCCccccCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~~~~~~ 279 (447)
+++++|.+++.... ...+++..++.++.++++||+|||++ +++|+||+|+||+++++ +.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999997643 23488999999999999999999999 99999999999999865 46899999999865432
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ....+...... ...
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~--------~~~~~~~~~~~-~~~----- 219 (256)
T cd08220 156 SK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN--------LPALVLKIMSG-TFA----- 219 (256)
T ss_pred cc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc--------hHHHHHHHHhc-CCC-----
Confidence 21 222457889999999998889999999999999999999999995321 11111111110 000
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.........+.+++.+||+.+|.+|||+.++++
T Consensus 220 ----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 ----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111123456889999999999999999999986
No 282
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.4e-37 Score=295.05 Aligned_cols=195 Identities=24% Similarity=0.382 Sum_probs=158.0
Q ss_pred CeeeecCCeEEEEEEEC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeec--CCcceEEEeccc
Q 013238 128 NILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPFMV 202 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 202 (447)
.+||+|+||.||+|... ++..||+|.+..... ...+.+|+++++.++||||+++++++.. ....+++|||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 57999999999999865 357899998865322 2357789999999999999999998854 456789999985
Q ss_pred CCcchhhhhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEE----CCCCcEEEeecCCc
Q 013238 203 NGSVASCLRERG-----QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLA 273 (447)
Q Consensus 203 ~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl~ 273 (447)
++|.+++.... .....+++..++.++.|++.||.|||+. +++||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 47777764321 1123488999999999999999999999 99999999999999 56779999999999
Q ss_pred cccCCCCCc--eeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 274 KLMDYKDTH--VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 274 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
+........ ......+|..|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 865432211 12234578999999998764 579999999999999999999999963
No 283
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.9e-37 Score=289.40 Aligned_cols=252 Identities=26% Similarity=0.431 Sum_probs=199.0
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|...+.||+|++|.||+|... +++.|++|.++..... .....+..|+++++.++|+||+++++++...+..++++||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4777889999999999999865 6889999998755432 2455788999999999999999999999988999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++.... .+++..++.++.+++.||.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEHGR----ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhhcC----CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 99999999987542 378899999999999999999999 99999999999999999999999999988764333
Q ss_pred Ccee---eccccccCccccccccCCC---CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 281 THVT---TAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 281 ~~~~---~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.... ....++..|+|||++.+.. .+.++||||||+++|||++|+.||.... ... ....... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~----~~~---~~~~~~~-~~~-- 223 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD----NEF---QIMFHVG-AGH-- 223 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc----chH---HHHHHHh-cCC--
Confidence 2211 1245788999999998766 7899999999999999999999995321 000 0000000 000
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...+. ........+.+++.+||+.+|.+|||+.+++.
T Consensus 224 ---~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 ---KPPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---CCCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00010 01112456789999999999999999999874
No 284
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.3e-37 Score=294.51 Aligned_cols=257 Identities=22% Similarity=0.344 Sum_probs=194.4
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|...+.||+|+||.||++... +++.+|+|.+...........+.+|+.++.++. |+||+++++++......+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999875 589999999976544444557888999999986 99999999999988899999999
Q ss_pred ccCCcchhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 201 MVNGSVASCLRER-GQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 201 ~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
+. +++.++.... ......+++..+..++.+++.||+|||+.. +++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 4555543221 111235899999999999999999999743 8999999999999999999999999998754322
Q ss_pred CCceeeccccccCccccccccCC---CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTG---KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
.. .....|+..|+|||++.+. .++.++||||||+++|||++|+.||.... ...+.+.......
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~----- 227 (288)
T cd06616 162 IA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVKGD----- 227 (288)
T ss_pred Cc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcCCC-----
Confidence 21 1223478899999998776 68899999999999999999999995321 1111111111100
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.+.+...........+.+++.+||+.+|.+|||+.+|++.
T Consensus 228 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 -PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111111112345678999999999999999999999874
No 285
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.5e-37 Score=292.51 Aligned_cols=263 Identities=22% Similarity=0.328 Sum_probs=199.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|+..+.||+|++|.||+|... +++.||+|.++.... ......+.+|+++++.++|+||+++++++...+..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888899999999999999976 588999999865432 2234568899999999999999999999999889999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+.++.+..+.... ..+++..++.++.+|+.||+|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEASP----GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 99887766555432 2388999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh---------
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK--------- 349 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 349 (447)
.........++..|+|||++.+. .++.++||||||+++|+|++|+.||..... ............
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD-----IDQLYLIQKCLGPLPPSHQEL 228 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHhhh
Confidence 33223334578899999999888 789999999999999999999999853211 111100000000
Q ss_pred ---ccccc--cccccccC----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 ---EKKLE--QLVDSDME----GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 ---~~~~~--~~~d~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..... +..+.... ..........+.+++.+||+.+|++|||++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000 00000000 0011123567899999999999999999999875
No 286
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-38 Score=300.08 Aligned_cols=253 Identities=23% Similarity=0.371 Sum_probs=200.6
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccc-cccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEE-RTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 197 (447)
....|+++++||+||.+.||++...+.+.+|+|++... ........|..|++.|.+++ |.+||++++|-..++..|||
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 34568888999999999999999888788888887543 33444556999999999996 99999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||- .-+|..+|++..... ..| .++.+..|++.|+.++|.+ ||||.||||.|+|+-+ |.+||+|||+|..+.
T Consensus 439 mE~G-d~DL~kiL~k~~~~~--~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSID--PDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred eecc-cccHHHHHHhccCCC--chH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 9987 569999998765432 334 7889999999999999999 9999999999999986 589999999999876
Q ss_pred CCCCce-eeccccccCccccccccCC-----------CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHH
Q 013238 278 YKDTHV-TTAVRGTIGHIAPEYLSTG-----------KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 345 (447)
Q Consensus 278 ~~~~~~-~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 345 (447)
...... ....+||+.||+||.+... ..+.++||||||||||+|+.|+.||... .+.+
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~----------~n~~- 579 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI----------INQI- 579 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH----------HHHH-
Confidence 554433 3456799999999988532 2467899999999999999999999631 1111
Q ss_pred HHhhccccccccccccCCCCcH-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIE-EEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.++..+.++...-+++. .....+.++|..||+.||.+|||+.+||+
T Consensus 580 -----aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 580 -----AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -----HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 23344555533222211 11122999999999999999999999998
No 287
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.5e-37 Score=293.04 Aligned_cols=245 Identities=24% Similarity=0.312 Sum_probs=197.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|++|.||++... +++.+|+|.+..... ......+.+|+++++++.||||+++++++......+++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36788899999999999999876 589999999865332 223446888999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++.... .+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~----~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKSG----RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 9999999999987653 488999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
. .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||.... ...........
T Consensus 154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~-------- 213 (290)
T cd05580 154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--------PIQIYEKILEG-------- 213 (290)
T ss_pred C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhcC--------
Confidence 3 223458899999999988888999999999999999999999995321 01111111110
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
. ...+......+.+++.+||+.+|.+|+ +++++++
T Consensus 214 -~--~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 214 -K--VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -C--ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0 011112245688999999999999999 6666654
No 288
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=295.63 Aligned_cols=249 Identities=27% Similarity=0.372 Sum_probs=203.2
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
+..+.|+.-++||+|+||.||-+... +|+.+|.|.+.+.+.. ..+...++|-.+|.+++.+.||.+-..+.+.+.++
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 44567888899999999999999865 6999999999765432 23445678999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
+|+..|+||+|.-+|.+.+. +.+++..+..++.+|+.||.+||+. +||+|||||+|||+|+.|+++|+|+|+|..
T Consensus 262 lVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAve 336 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVE 336 (591)
T ss_pred EEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEe
Confidence 99999999999999988764 4599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 276 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 276 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
+... ......+||.+|||||++.+..|+...|+|||||+||||+.|+.||.... ++...+
T Consensus 337 i~~g--~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K------------------eKvk~e 396 (591)
T KOG0986|consen 337 IPEG--KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK------------------EKVKRE 396 (591)
T ss_pred cCCC--CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh------------------hhhhHH
Confidence 6433 33444579999999999999999999999999999999999999996421 111111
Q ss_pred cccccc---CCCCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 013238 356 LVDSDM---EGNYIEEEVEQLIQVALLCTQGSPMERPKMS 392 (447)
Q Consensus 356 ~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 392 (447)
-+|.+. ...++....+...++....|+.||.+|..-+
T Consensus 397 Evdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 397 EVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 112111 1233445556667777777899999997654
No 289
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.7e-37 Score=293.53 Aligned_cols=247 Identities=28% Similarity=0.400 Sum_probs=194.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+.|...+.||+|+||.||+|... +++.||+|.+..... ......+.+|+++++.++|||++++.+++...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999875 688999999864322 222346888999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+. |+|.+++.... .++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~---~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVHK---KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9996 57777665432 2489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCceeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
. ....++..|+|||++. ...++.++||||||+++|||+||+.||..... ..........
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~--------~~~~~~~~~~----- 229 (307)
T cd06607 168 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQN----- 229 (307)
T ss_pred C-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH--------HHHHHHHhcC-----
Confidence 2 1234788999999874 45678899999999999999999999853210 0111111000
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.............+.+++.+||+.+|.+||++.+++..
T Consensus 230 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 230 ----DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ----CCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00001112245568999999999999999999999874
No 290
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3e-37 Score=292.87 Aligned_cols=251 Identities=19% Similarity=0.307 Sum_probs=199.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.++|...+.||+|+||.||++... +++.||+|.+..... .....+.+|+.+++.++|||++++++++...+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 367888899999999999999864 678899999864332 223467889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+++++|.+++... .+++..+..++.+++.||.|||++ +++|+||+|+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 97 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred cCCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 99999999998653 278899999999999999999999 9999999999999999999999999988755433
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
... .....++..|+|||.+.+..++.++||||||+++|++++|+.||...... ..+..... ..
T Consensus 169 ~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~--------~~~~~~~~--------~~ 231 (293)
T cd06647 169 QSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIAT--------NG 231 (293)
T ss_pred ccc-cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh--------hheeehhc--------CC
Confidence 222 22335788999999998888999999999999999999999999632110 00000000 00
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.............+.+++.+||+.+|++||++.+++..
T Consensus 232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 232 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011122234568889999999999999999999863
No 291
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3e-37 Score=288.77 Aligned_cols=253 Identities=27% Similarity=0.424 Sum_probs=199.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-----chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-----GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 196 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 196 (447)
+|+..+.||+|++|.||++... +++.+|+|.+...... .....+..|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4777889999999999999864 6889999998643321 123468899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC-cEEEeecCCccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKL 275 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~ 275 (447)
||||+++++|.+++.... ++++..++.++.|++.||.|||++ +++|+||+|+||+++.++ .++|+|||++..
T Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 999999999999987543 488999999999999999999999 999999999999998776 599999999876
Q ss_pred cCCCCCc---eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 276 MDYKDTH---VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 276 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
....... ......++..|+|||.+.+..++.++||||||+++|+|++|..||..... ...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~---- 224 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH-----SNHLALIFKIA---- 224 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-----cchHHHHHHHh----
Confidence 5432111 11223578899999999888899999999999999999999999953211 11111111110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
........+......+.+++.+||+.+|.+|||+.++++
T Consensus 225 -----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 225 -----SATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -----ccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 001112233344567889999999999999999999885
No 292
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.2e-37 Score=292.02 Aligned_cols=259 Identities=20% Similarity=0.272 Sum_probs=201.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|+..+.||+|+||.||++... .++.|++|.+..... ......+.+|+++++.++|+||+++++.+...+..+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36788899999999999999876 478999999865432 222346778999999999999999999999888999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++.... ++++..+..++.+++.||+|||+. +++||||||+||+++.++.++|+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 9999999999996643 488999999999999999999999 999999999999999999999999999864211
Q ss_pred CCC--------------ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHH
Q 013238 279 KDT--------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 279 ~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 344 (447)
... .......++..|+|||.+.+..++.++||||||+++|||++|..||... ...++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~--------~~~~~~ 225 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--------TPEELF 225 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHH
Confidence 100 0011234678899999998888999999999999999999999999521 111111
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 403 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 403 (447)
....... ...+. ........+.+++.+||+.+|.+||++.++.+.|+..-+
T Consensus 226 ~~~~~~~----~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~ 276 (305)
T cd05609 226 GQVISDD----IEWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF 276 (305)
T ss_pred HHHHhcc----cCCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccc
Confidence 1111110 00000 011234568899999999999999998888888877433
No 293
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=8.5e-38 Score=296.42 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=195.0
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEeccc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 202 (447)
|.....||+|+||.||++... ++..||||.+.... ......+.+|+..++.++|+|++++++.+...+..+++|||++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 333466999999999999875 58899999986433 2334468899999999999999999999999999999999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
+++|.+++... .+++..++.++.+|+.||.|||++ +++||||||+||++++++.++|+|||++.........
T Consensus 103 ~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 103 GGALTDIVTHT-----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred CCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 99999987542 378999999999999999999999 9999999999999999999999999998754322221
Q ss_pred eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 283 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||.... . ...+.... ........
T Consensus 175 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~---~~~~~~~~------~~~~~~~~ 239 (292)
T cd06658 175 -RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP-----P---LQAMRRIR------DNLPPRVK 239 (292)
T ss_pred -CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H---HHHHHHHH------hcCCCccc
Confidence 222457889999999988889999999999999999999999995311 0 11111110 01111111
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. .......+.+++.+||..||.+|||+.++++.
T Consensus 240 ~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 D--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred c--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1 11223457789999999999999999999974
No 294
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.4e-37 Score=291.11 Aligned_cols=262 Identities=23% Similarity=0.332 Sum_probs=195.1
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||.|++|.||+|... +++.||||.+..... ......+.+|++++++++|+||+++++++.+....+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999876 688999999865432 22234688899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. ++|..++..... ..+++..++.++.+++.||+|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 95 688888865432 3489999999999999999999999 99999999999999999999999999987654322
Q ss_pred CceeeccccccCccccccccCCC-CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc--------
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-------- 351 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 351 (447)
. ......++..|+|||++.+.. ++.++||||||+++|||+||+.||.... ................
T Consensus 155 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 155 R-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS----EIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred c-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHHHhCCCChhhhhhhh
Confidence 1 122234678899999887654 5889999999999999999999995311 1111111111000000
Q ss_pred -------ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 352 -------KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 352 -------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.......... ..........+.+++.+||+.||.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 230 SLPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000000 0000112345778999999999999999999885
No 295
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.8e-37 Score=291.13 Aligned_cols=262 Identities=23% Similarity=0.293 Sum_probs=197.3
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ----GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
+|...+.||+|++|.||+|... +++.||||.+...... .....+..|+++++.++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4677889999999999999975 6899999999754332 1234567899999999999999999999998899999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||+ +++|.+++.... ..+++..++.++.||++||.|||++ +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 999999987543 2489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc-----
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK----- 351 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 351 (447)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|..+|.... ...............
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 227 (298)
T cd07841 154 SPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-----DIDQLGKIFEALGTPTEENW 227 (298)
T ss_pred CCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-----cHHHHHHHHHHcCCCchhhh
Confidence 3322 1222346778999998865 457899999999999999999987774311 111111110000000
Q ss_pred ----ccccccccccCCC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 352 ----KLEQLVDSDMEGN-----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 352 ----~~~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
............. ........+.+++.+||+.+|.+|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000000 112234678899999999999999999999873
No 296
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=320.84 Aligned_cols=266 Identities=25% Similarity=0.391 Sum_probs=215.7
Q ss_pred HHHHHhhCCCCCCeeeecCCeEEEEEEEC----C----CcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEee
Q 013238 116 ELQVATDNFSNRNILGRGGFGKVYKGRLT----D----GSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRG 186 (447)
Q Consensus 116 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~ 186 (447)
.+++..++..+.+.||+|.||.|++|... . ...||||.++..........+..|+++++.+. |+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 45666677777789999999999999743 1 45799999998777766778999999998874 999999999
Q ss_pred eeecCCcceEEEecccCCcchhhhhhcC---CC-------C--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCC
Q 013238 187 FCMTPTERLLVYPFMVNGSVASCLRERG---QS-------Q--PPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKA 254 (447)
Q Consensus 187 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~-------~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~ 254 (447)
.|......++|+||+..|+|..+|+..+ .. . ..+.....+.++.|||.||+||++. +++||||..
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 9999899999999999999999998876 10 1 2388999999999999999999999 999999999
Q ss_pred CCEEECCCCcEEEeecCCccccCCCCCceeecccc--ccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCccccc
Q 013238 255 ANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLAR 331 (447)
Q Consensus 255 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~ 331 (447)
+|||+.++..+||+|||+++..............+ ...|||||.+....++.++|||||||+||||+| |..||...
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~- 525 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI- 525 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC-
Confidence 99999999999999999999654444333222222 456999999999999999999999999999999 88888420
Q ss_pred ccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 332 LANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
....+.+. .+....+...+..+...++++|+.||+.+|++||++.++.+.|+..
T Consensus 526 ------~~~~~l~~----------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 526 ------PPTEELLE----------FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ------CcHHHHHH----------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 00111111 1222233344555677899999999999999999999999999983
No 297
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.2e-37 Score=287.58 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=203.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|++|.||++... +++.+++|.+..... ......+..|+++++.++|+||+++.+++......+++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4777889999999999999865 678999999875432 23344677899999999999999999999988999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++.........+++..++.++.+++.||+|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999877544445689999999999999999999999 9999999999999999999999999999876443
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
......++..|+|||.+.+..++.++|+||||+++|||++|+.||.... ........ .. .
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~-~~---------~ 216 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS--------MQDLRYKV-QR---------G 216 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHH-hc---------C
Confidence 1222347889999999999889999999999999999999999995321 11111111 11 1
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
............+.+++.+||+.+|.+|||+.++++.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 217 KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1112223455679999999999999999999999863
No 298
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7.4e-37 Score=290.20 Aligned_cols=262 Identities=24% Similarity=0.323 Sum_probs=196.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLV 197 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 197 (447)
++|+..+.||+|++|.||+|... +++.+|+|.++..... .....+.+|++++.+++||||+++++++... ...+++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46788899999999999999986 5889999999754322 2233567899999999999999999998877 789999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||+. ++|.+++..... .+++..++.++.||+.||+|||+. +++|+||||+||++++++.++|+|||++....
T Consensus 85 ~e~~~-~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ---PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcC-cCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 99996 589888865432 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh-------
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK------- 349 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------- 349 (447)
.... ......++..|+|||.+.+. .++.++||||||+++|||++|..||..... ......+.....
T Consensus 158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 158 SPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-----IDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred CCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCchHHH
Confidence 4321 12223468889999988764 468999999999999999999999953211 000000000000
Q ss_pred ----------ccccccccccccCCCCcHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 350 ----------EKKLEQLVDSDMEGNYIEE-EVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 350 ----------~~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...........+....... ....+.+++.+||+.+|++|||+.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 232 PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000000111111111 3556889999999999999999999985
No 299
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=305.70 Aligned_cols=244 Identities=26% Similarity=0.422 Sum_probs=197.2
Q ss_pred eeeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcch
Q 013238 129 ILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA 207 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 207 (447)
+||+|.||+||.|++.+ ...+|||-+...... ...-+..|+.+-+.++|.|||+++|.+...+..-+.||..+||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr-~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR-EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccch-hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 59999999999999764 567899998654332 2335889999999999999999999999888888999999999999
Q ss_pred hhhhhcCCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC-CCCcEEEeecCCccccCCCCCcee
Q 013238 208 SCLRERGQSQPPL--NWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVT 284 (447)
Q Consensus 208 ~~l~~~~~~~~~l--~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~~~~~ 284 (447)
++|+..-+ |+ .+.++-.+..||++||.|||++ .|||||||-+||||+ -.|.+||+|||-++.+..- .-.+
T Consensus 661 sLLrskWG---PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP~T 733 (1226)
T KOG4279|consen 661 SLLRSKWG---PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NPCT 733 (1226)
T ss_pred HHHHhccC---CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC-Cccc
Confidence 99986433 35 7888999999999999999999 999999999999996 4789999999999877533 2334
Q ss_pred eccccccCccccccccCC--CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 285 TAVRGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 285 ~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
....||..|||||++..+ .|..++|||||||++.||.||++||-.... . ...-+-.+++ ...
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs--p---qAAMFkVGmy-----------KvH 797 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS--P---QAAMFKVGMY-----------KVH 797 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC--h---hHhhhhhcce-----------ecC
Confidence 455699999999999765 478999999999999999999999953211 0 0000001111 112
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+..+.+.......++++|+.++|.+||++.++++
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 3456666778889999999999999999999986
No 300
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-38 Score=304.16 Aligned_cols=249 Identities=26% Similarity=0.431 Sum_probs=195.7
Q ss_pred CCeeeecCCeEEEEEEEC-CCcEEEEEEec---cccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCc--ceEEEec
Q 013238 127 RNILGRGGFGKVYKGRLT-DGSLVAVKRLK---EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE--RLLVYPF 200 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~---~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 200 (447)
..+||+|+|-+||+|.+. +|..||--.++ .........+|..|+.+|+.|+|+||++++.++.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 467999999999999876 47667644443 22333344679999999999999999999999987665 6689999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC-CCcEEEeecCCccccCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~~ 279 (447)
+..|+|..+++..+. ++...++.|+.||++||.|||++ .|+|+|||||-+||||+. .|.|||+|+|||......
T Consensus 125 ~TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999988764 78889999999999999999997 668999999999999975 589999999999876543
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
. .....|||.|||||++. ..|++..||||||++++||+|+..||.. ......+...|..-.+...+..+.|
T Consensus 200 ~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE----C~n~AQIYKKV~SGiKP~sl~kV~d- 270 (632)
T KOG0584|consen 200 H---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE----CTNPAQIYKKVTSGIKPAALSKVKD- 270 (632)
T ss_pred c---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh----hCCHHHHHHHHHcCCCHHHhhccCC-
Confidence 3 23367999999999986 7899999999999999999999999952 1111222222222222222222222
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR--MLEGD 401 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~ 401 (447)
..+.++|.+|+.. ..+|||+.|+|. +|...
T Consensus 271 -----------Pevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 271 -----------PEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -----------HHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 3478899999998 999999999997 55543
No 301
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=287.07 Aligned_cols=243 Identities=24% Similarity=0.374 Sum_probs=204.3
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEeccc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 202 (447)
|.+.++||+|+||.||+|.++ .|+.+|||.+..+. ...++..|+.++.+...+++|+++|.+.....+|+|||||.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 555678999999999999876 69999999987543 34568899999999999999999999999999999999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
.|+..+.++.+.. ++.+.++..++...++||+|||.. .-+|||||..|||++.+|.+||+|||.+..+...- .
T Consensus 112 AGSiSDI~R~R~K---~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-A 184 (502)
T KOG0574|consen 112 AGSISDIMRARRK---PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-A 184 (502)
T ss_pred CCcHHHHHHHhcC---CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH-H
Confidence 9999999987653 599999999999999999999998 88999999999999999999999999998764322 2
Q ss_pred eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc--ccc
Q 013238 283 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV--DSD 360 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~ 360 (447)
....+.||+-|||||++..-.|+.++||||||+...||..|++||... +....++ -..
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI--------------------HPMRAIFMIPT~ 244 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI--------------------HPMRAIFMIPTK 244 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc--------------------cccceeEeccCC
Confidence 234456999999999999999999999999999999999999999521 1111111 111
Q ss_pred cCC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEG--NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
-.. ..+..-...+.+++..||-++|++|-|+.++++
T Consensus 245 PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 245 PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 111 224455678999999999999999999998887
No 302
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.7e-37 Score=288.60 Aligned_cols=263 Identities=22% Similarity=0.346 Sum_probs=197.7
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
+|+..+.||.|++|.||+|... +|..||||.++..........+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999986 588999999976544444456778999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+ +|.+++..... ..++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 75 88888765432 23589999999999999999999999 999999999999999999999999999975533221
Q ss_pred ceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc---ccccc-
Q 013238 282 HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK---KLEQL- 356 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~- 356 (447)
......++..|++||++.+. .++.++||||||+++|+|++|+.||..... .............. ....+
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN-----EDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHHHHhCCCChhhHHHHh
Confidence 12223468899999988664 568899999999999999999999963211 00000000000000 00000
Q ss_pred ----cccccC-------CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 357 ----VDSDME-------GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 357 ----~d~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...... ..........+.+++.+||+.||.+||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 0001123456789999999999999999999875
No 303
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.6e-37 Score=289.99 Aligned_cols=252 Identities=23% Similarity=0.361 Sum_probs=201.7
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
..+.|+..+.||+|++|.||++... ++..+++|.+..... ....+..|+++++.++|+|++++++.+......++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 3456777889999999999999987 688999999975433 3456888999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 95 EYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred eccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 9999999999998754 2489999999999999999999998 999999999999999999999999998875443
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ......... .....
T Consensus 169 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~~~--- 235 (286)
T cd06614 169 EKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP--------LRALFLITT-KGIPP--- 235 (286)
T ss_pred chh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHh-cCCCC---
Confidence 221 11223477899999999888899999999999999999999999853110 011111100 00000
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..........+.+++.+||+.+|.+|||+.++++
T Consensus 236 ----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 ----LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ----CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0111123456889999999999999999999986
No 304
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.6e-37 Score=291.04 Aligned_cols=245 Identities=21% Similarity=0.301 Sum_probs=194.3
Q ss_pred CCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCc
Q 013238 127 RNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 205 (447)
...||+|+||.||++... +++.||+|.+..... .....+.+|+.++..++|||++++++++...+..+++|||+++++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 346999999999999875 688999999865432 234467889999999999999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceee
Q 013238 206 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 285 (447)
Q Consensus 206 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 285 (447)
|..++... .+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........ ...
T Consensus 105 L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~ 175 (297)
T cd06659 105 LTDIVSQT-----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRK 175 (297)
T ss_pred HHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-ccc
Confidence 99877542 388999999999999999999999 999999999999999999999999999875433221 122
Q ss_pred ccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCC
Q 013238 286 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNY 365 (447)
Q Consensus 286 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 365 (447)
...++..|+|||++.+..++.++||||||+++|||++|+.||.... . .+.+..... ..... ...
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-----~---~~~~~~~~~-~~~~~-------~~~ 239 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS-----P---VQAMKRLRD-SPPPK-------LKN 239 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H---HHHHHHHhc-cCCCC-------ccc
Confidence 3458899999999998889999999999999999999999995311 1 111111111 00000 001
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 366 IEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 366 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.......+.+++.+||+.+|.+||++.++++.
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 11223458889999999999999999999984
No 305
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.7e-37 Score=287.23 Aligned_cols=251 Identities=21% Similarity=0.317 Sum_probs=199.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|+||.||++... +|..+|+|.+...... .....+.+|+++++.++|+|++++++.+......++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677889999999999999976 5788999998654221 2344678899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC-cEEEeecCCccccCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKLMDYK 279 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~ 279 (447)
+++++|.+++..... ..+++..++.++.++++||.|||+. +++|+||+|+||++++++ .++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 999999999876432 2479999999999999999999999 999999999999999886 4699999998765432
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
.. ......|+..|+|||++.+..++.++|+||||+++|||++|..||.... ...++....... ..
T Consensus 156 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~-----~~- 220 (257)
T cd08225 156 ME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--------LHQLVLKICQGY-----FA- 220 (257)
T ss_pred cc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHhccc-----CC-
Confidence 22 2222347889999999988889999999999999999999999985321 122222211111 00
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.........+.+++.+||+.+|++|||+.++++.
T Consensus 221 ----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 ----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1111233568899999999999999999999863
No 306
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.5e-36 Score=286.30 Aligned_cols=258 Identities=21% Similarity=0.267 Sum_probs=192.1
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecC--CcceEEEe
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTP--TERLLVYP 199 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 199 (447)
|+..+.||+|+||.||+|... +++.+|+|.++............+|+.++.++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 556788999999999999875 588999999876533333334557888888885 99999999999877 78899999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+. ++|.+.+.... ..+++..++.++.|++.||+|||+. +++||||+|+||+++. +.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 996 57877776532 2489999999999999999999999 9999999999999999 99999999999865432
Q ss_pred CCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc--------
Q 013238 280 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-------- 350 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 350 (447)
... ....++..|+|||++.+ ..++.++|||||||++|||++|..||.... ......+.......
T Consensus 153 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 225 (282)
T cd07831 153 PPY--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN-----ELDQIAKIHDVLGTPDAEVLKK 225 (282)
T ss_pred CCc--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC-----HHHHHHHHHHHcCCCCHHHHHh
Confidence 221 22347889999997644 557889999999999999999999995321 11111111111110
Q ss_pred ---cccccccccccCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 351 ---KKLEQLVDSDMEGN----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 351 ---~~~~~~~d~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
........+..... ........+.+++.+||+.+|.+|||+.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00000000000000 01134577999999999999999999999986
No 307
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.2e-36 Score=281.31 Aligned_cols=249 Identities=27% Similarity=0.427 Sum_probs=200.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
+|+..+.||+|++|.||++... +++.+++|++..... .....+.+|+++++.++|+|++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 4677789999999999999986 688999999976543 33457889999999999999999999999989999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 80 SGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 9999999987643 3489999999999999999999998 999999999999999999999999999876654322
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
.....++..|+|||.+.+..++.++||||||+++++|++|+.||.... .......... ........
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~~~~~--- 219 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP--------PMKALFKIAT-NGPPGLRN--- 219 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc--------hHHHHHHHHh-cCCCCcCc---
Confidence 233457889999999988889999999999999999999999995321 0111111100 00000000
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.......+.+++.+||+.||++|||+.++++
T Consensus 220 ----~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 ----PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ----ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112456899999999999999999999875
No 308
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9e-37 Score=284.74 Aligned_cols=243 Identities=23% Similarity=0.322 Sum_probs=194.7
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
||.|++|.||++... +++.+|+|.+...... .....+.+|+++++.++|+||+++++++.+....++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999986 4889999999754322 3345688999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeec
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 286 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 286 (447)
.+++.... .+++..+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 81 WTILRDRG----LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 99997643 388999999999999999999998 99999999999999999999999999998664332 1223
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
..++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ........... .......+
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~---------~~~~~~~~ 216 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILK---------GNGKLEFP 216 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhc---------cCCCCCCC
Confidence 3578899999999888899999999999999999999999964211 11222222111 01111122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 396 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 396 (447)
......+.+++.+||+.+|.+||+ +.|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 222567999999999999999999 666655
No 309
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=7.6e-37 Score=283.89 Aligned_cols=252 Identities=24% Similarity=0.376 Sum_probs=204.4
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|...+.||.|++|.||++... +++.+++|++..... ......+.+|+++++.++|+|++++.+.+......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999976 588999999975433 23445688999999999999999999999888999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++.........+++..++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999987543335699999999999999999999999 99999999999999999999999999997654432
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.......|+..|+|||.+.+..++.++||||||+++++|++|+.||.... ........... ...
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~~-~~~------ 221 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--------LLELALKILKG-QYP------ 221 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc--------HHHHHHHHhcC-CCC------
Confidence 12233457889999999988889999999999999999999999995321 11111111111 111
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+......+.+++.+||+.+|.+|||+.++++
T Consensus 222 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 ---PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111133456889999999999999999999886
No 310
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.9e-36 Score=287.55 Aligned_cols=265 Identities=22% Similarity=0.304 Sum_probs=193.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcC-CCceeeEeeeeecCCc-----
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTE----- 193 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~----- 193 (447)
++|+..+.||+|+||.||+|... +++.||+|.+...... .....+.+|+++++.+. |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888899999999999999976 6899999998654322 22346788999999995 6999999999876655
Q ss_pred ceEEEecccCCcchhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC-CCcEEEeecC
Q 013238 194 RLLVYPFMVNGSVASCLRERGQS-QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFG 271 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg 271 (447)
.+++|||+.+ +|.+++...... ...+++..++.++.||++||.|||++ +++||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999975 788887654332 34589999999999999999999999 9999999999999998 8999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
++......... .....+++.|+|||++.+ ..++.++||||||+++|+|++|..||..... ......... ....
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~----~~~~~~~~~-~~~~ 230 (295)
T cd07837 157 LGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE----LQQLLHIFK-LLGT 230 (295)
T ss_pred cceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHH-HhCC
Confidence 98765332211 122346788999998865 4578999999999999999999999953110 000000000 0000
Q ss_pred cccc---cccc-------cccC----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 351 KKLE---QLVD-------SDME----GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 351 ~~~~---~~~d-------~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... .... +... ..........+.+++.+||+.||.+|||+.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 0000 0000 0001123456889999999999999999999875
No 311
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.8e-37 Score=297.24 Aligned_cols=263 Identities=20% Similarity=0.329 Sum_probs=194.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC-----Ccc
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TER 194 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 194 (447)
+++|++.+.||+|++|.||+|... +|+.||+|.+...........+.+|+.+++.++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999865 68999999986543333445678899999999999999999887643 346
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++++||+. ++|...+... .+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhcc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 89999996 4777776542 389999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCc--eeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc
Q 013238 275 LMDYKDTH--VTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 351 (447)
Q Consensus 275 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (447)
........ ......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ......+...+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-----~~~~~~~~~~~~~~ 229 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-----LHQLNLILGVLGTP 229 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCC
Confidence 65332211 1122457889999998754 5689999999999999999999999953211 11111111111100
Q ss_pred c---cccccccc-------c--CCCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 352 K---LEQLVDSD-------M--EGNY-----IEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 352 ~---~~~~~d~~-------~--~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. ...+.+.. . .... .......+.+++.+||+.+|.+|||+.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 230 SQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00000000 0 0000 01224568899999999999999999999886
No 312
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.1e-36 Score=287.63 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=196.0
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceEEEe
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYP 199 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 199 (447)
|+..+.||+|++|.||+|... +++.+|+|.+.... .......+.+|+++++.++|+|++++++++... ...++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 556788999999999999976 48899999997653 222344678899999999999999999999887 78999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|++ ++|.+++.... ..+++..++.++.+|+.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~-~~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMD-HDLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccc-ccHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 996 48888876542 3489999999999999999999999 9999999999999999999999999999866544
Q ss_pred CCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc---c
Q 013238 280 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE---Q 355 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 355 (447)
.........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.... .......+.......... .
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST-----ELEQLEKIFELCGSPTDENWPG 228 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCchhhccc
Confidence 3222333446788999998765 457899999999999999999999995321 111111111110000000 0
Q ss_pred ccc--------------cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 356 LVD--------------SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 356 ~~d--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+ ..+.......+...+.+++.+||+.+|.+|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 00000000112567899999999999999999999876
No 313
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-37 Score=311.24 Aligned_cols=273 Identities=20% Similarity=0.261 Sum_probs=187.2
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC--CcEEEEEEe--------------ccc--cccchHHHHHHHHHHHHhcCCCce
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTD--GSLVAVKRL--------------KEE--RTQGGELQFQTEVEMISMAVHRNL 181 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~--------------~~~--~~~~~~~~~~~e~~~l~~l~h~ni 181 (447)
..++|++.+.||+|+||+||++.... +...++|.+ .+. ........+.+|++++..++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987542 222222211 000 011123457889999999999999
Q ss_pred eeEeeeeecCCcceEEEecccCCcchhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC
Q 013238 182 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQS-QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD 260 (447)
Q Consensus 182 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~ 260 (447)
+++++++...+..+++++++. ++|..++...... ........++.++.||+.||.|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999984 5777766443211 12234566778999999999999999 999999999999999
Q ss_pred CCCcEEEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccH
Q 013238 261 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 340 (447)
Q Consensus 261 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~ 340 (447)
.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|..++..... ......+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~-~~~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG-GKPGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC-CCHHHHH
Confidence 999999999999987654333333345689999999999999999999999999999999998764321110 0001111
Q ss_pred HHHHHHHhh-cc-------cccccccccc---CCCCcH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 341 LDWVKGLLK-EK-------KLEQLVDSDM---EGNYIE------EEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 341 ~~~~~~~~~-~~-------~~~~~~d~~~---~~~~~~------~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
...+..... .. .+.+.++... ...... .....+.+++.+||+.||.+|||+.|++..
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111110000 00 0000000000 000000 112346778999999999999999999873
No 314
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.7e-36 Score=291.07 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=194.0
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
|...+.||+|+||.||++... ++..+|+|.+..... ......+..|+++++.++|+|++++++++......++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 566788999999999999875 588999999864322 22234688899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. |+|.+.+.... .++++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 107 ~~-g~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 107 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 96 57777765432 2489999999999999999999999 9999999999999999999999999998754322
Q ss_pred CceeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
....++..|+|||++. .+.++.++||||||+++|||++|+.||.... ............
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~------ 240 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNE------ 240 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHhcc------
Confidence 2234788999999874 4568899999999999999999999985311 111111111110
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
............+.+++.+||+.+|.+||++.++++.+..
T Consensus 241 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 241 ---SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred ---CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 0011112234568899999999999999999999986543
No 315
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.7e-37 Score=299.14 Aligned_cols=196 Identities=24% Similarity=0.349 Sum_probs=167.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC------CCceeeEeeeeecCCcc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV------HRNLLRLRGFCMTPTER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~~~~~ 194 (447)
-+|++.+.||+|.||.|-+|.+. +++.||||+++....- ..+-..|+.+|..++ --|+|++++++.-.++.
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH--HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 38889999999999999999865 6999999999765322 234567888888886 34699999999999999
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC--CcEEEeecCC
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE--FEAVVGDFGL 272 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgl 272 (447)
+||+|.+ .-+|.++++.+.-. +++...++.++.||+.||.+||+. +|||+||||+||||.+- ..+||+|||.
T Consensus 264 ciVfELL-~~NLYellK~n~f~--Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 264 CIVFELL-STNLYELLKNNKFR--GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeehhh-hhhHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 9999999 56999999987644 499999999999999999999999 99999999999999654 4699999999
Q ss_pred ccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 273 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 273 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
++...... . ...-+..|.|||++.+.+|+.+.||||||||+.||++|.+.|..
T Consensus 338 Sc~~~q~v---y-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 338 SCFESQRV---Y-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred ccccCCcc---e-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 98654322 2 33467789999999999999999999999999999999887743
No 316
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=283.60 Aligned_cols=267 Identities=25% Similarity=0.324 Sum_probs=218.7
Q ss_pred CHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEee
Q 013238 113 SLRELQVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 186 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 186 (447)
...++.+..++++...++-+|.||.||+|.+. +.+.|.+|.++....+-....++.|--++..+.|||+..+.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 36677788889999999999999999999654 345688898887777666667888999999999999999999
Q ss_pred eeecC-CcceEEEecccCCcchhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC
Q 013238 187 FCMTP-TERLLVYPFMVNGSVASCLRERGQ----SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE 261 (447)
Q Consensus 187 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~ 261 (447)
++... ...++++.++.-|+|..+|...+. ..+.++..+...++.|++.|++|||++ +++|.||..+|++||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 98764 567899999999999999984322 223477788889999999999999999 9999999999999999
Q ss_pred CCcEEEeecCCccccCCCCCceee-ccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCccc
Q 013238 262 EFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVM 339 (447)
Q Consensus 262 ~~~~kl~Dfgl~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~ 339 (447)
..++||+|-.+++.+.+.+....+ ....+..||+||.+....|+.++||||||++||||+| |+.|+... +
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI--------D 503 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI--------D 503 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc--------C
Confidence 999999999999977666654333 2335778999999999999999999999999999998 89998431 1
Q ss_pred HHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 340 LLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..+....+.++.++ ..+.+++++++.+|.-||...|++||++++++..|.+
T Consensus 504 PfEm~~ylkdGyRl----------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 504 PFEMEHYLKDGYRL----------AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred HHHHHHHHhcccee----------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 22222222223332 3355678889999999999999999999999999874
No 317
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.5e-36 Score=291.11 Aligned_cols=270 Identities=23% Similarity=0.304 Sum_probs=194.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC---CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--Ccce
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT---DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERL 195 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 195 (447)
+|+..+.||+|++|.||+|... +++.||+|.+.... .......+.+|+++++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4677889999999999999975 37899999997632 122234577899999999999999999999887 7789
Q ss_pred EEEecccCCcchhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC----CCcEEEeec
Q 013238 196 LVYPFMVNGSVASCLRERGQSQ-PPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE----EFEAVVGDF 270 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~----~~~~kl~Df 270 (447)
+||||+++ +|.+++....... ..+++..++.++.|++.||.|||+. +++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999965 6766665433222 3689999999999999999999999 9999999999999999 999999999
Q ss_pred CCccccCCCCC--ceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCc-----ccHHH
Q 013238 271 GLAKLMDYKDT--HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-----VMLLD 342 (447)
Q Consensus 271 gl~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~-----~~~~~ 342 (447)
|++........ .......++..|+|||++.+. .++.++||||||+++++|++|+.||.......... ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986543222 112223478889999988664 57899999999999999999999996432211000 00001
Q ss_pred HHHHHh-----------hccccccccccccCCCCc----H-------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 343 WVKGLL-----------KEKKLEQLVDSDMEGNYI----E-------EEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 343 ~~~~~~-----------~~~~~~~~~d~~~~~~~~----~-------~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.+..+- .........+........ . .....+.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 100000 000000000000000000 0 23356889999999999999999999875
No 318
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.9e-36 Score=285.31 Aligned_cols=243 Identities=27% Similarity=0.343 Sum_probs=185.2
Q ss_pred eeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHH---HhcCCCceeeEeeeeecCCcceEEEeccc
Q 013238 129 ILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMI---SMAVHRNLLRLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 202 (447)
.||+|+||.||++... +++.+|+|.+...... .....+.+|..++ ...+|+|++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 5889999998654322 1122334444433 34479999999999998889999999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
+++|..++.... .+++..+..++.|++.||.|||+. +++|+||||+|||+++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQHG----VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 999999886543 489999999999999999999999 99999999999999999999999999987543222
Q ss_pred eeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 283 VTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|..||...... .... ...... ..
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~-~~~~~~----------~~ 214 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHE-IDRMTL----------TV 214 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc-----CHHH-HHHHhh----------cC
Confidence 122358999999999864 56789999999999999999999999632110 1111 111100 00
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVRM 397 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 397 (447)
....+......+.+++.+||+.||.+|| |++++++.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1112223446688999999999999999 58888764
No 319
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.5e-36 Score=287.69 Aligned_cols=266 Identities=23% Similarity=0.337 Sum_probs=197.2
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC----
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT---- 192 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 192 (447)
...++|++.+.||+|+||.||+|... +|+.||+|.++.... ......+.+|+++++.++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999986 588999999975432 223346778999999999999999999887654
Q ss_pred ------cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 193 ------ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 193 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
..++++||+++ ++...+... ...+++..++.++.|++.||+|||+. +++|+||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 68899999976 666666543 22489999999999999999999999 999999999999999999999
Q ss_pred EeecCCccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHH
Q 013238 267 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 345 (447)
Q Consensus 267 l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 345 (447)
|+|||++...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+.
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-----~~~~~~~~~ 231 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-----ELAQLELIS 231 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHH
Confidence 99999998664433222222345778999998865 357889999999999999999999996321 111111111
Q ss_pred HHhhcccc---ccccc--------ccc-----CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 346 GLLKEKKL---EQLVD--------SDM-----EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 346 ~~~~~~~~---~~~~d--------~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
........ ..+.. ... ........+..+.+++.+||+.+|.+|||+.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111000 00000 000 00001112456899999999999999999999875
No 320
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=279.60 Aligned_cols=243 Identities=27% Similarity=0.340 Sum_probs=197.4
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCceeeEeeeeecCCcce
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 195 (447)
+..++|..+++||+|.||+|.+++-+ +++.+|+|+++++..... ...-+.|-.+|+..+||.+..+...++..+.++
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 34578888999999999999999865 699999999987754332 234567889999999999999999999999999
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
+||||..||.|.-+|...+ .+++...+.+-..|+.||.|||++ +||+||||.+|.|+|.+|++||+|||+++.
T Consensus 245 FVMeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchh
Confidence 9999999999999887643 388888889999999999999999 999999999999999999999999999985
Q ss_pred cCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 276 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 276 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
- ..........+||+.|+|||++....|..+.|+|.+||++|||++|+.||..- +. .++.+
T Consensus 318 ~-I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~-----dh-------------~kLFe 378 (516)
T KOG0690|consen 318 E-IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK-----DH-------------EKLFE 378 (516)
T ss_pred c-ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc-----ch-------------hHHHH
Confidence 3 23445567788999999999999999999999999999999999999999531 11 11111
Q ss_pred ccc-cccCCCCcHHHHHHHHHHHHHccCCCCCCCC
Q 013238 356 LVD-SDMEGNYIEEEVEQLIQVALLCTQGSPMERP 389 (447)
Q Consensus 356 ~~d-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 389 (447)
++- ..+ .++.........++...|..||.+|.
T Consensus 379 LIl~ed~--kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 379 LILMEDL--KFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred HHHhhhc--cCCccCCHHHHHHHHHHhhcChHhhc
Confidence 110 111 12222233455667778899999996
No 321
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.4e-36 Score=287.16 Aligned_cols=248 Identities=21% Similarity=0.324 Sum_probs=197.0
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
.|...+.||+|++|.||++... +++.+++|.+.... ......+.+|+.+++.++|+|++++++++...+..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 3455678999999999999865 68899999885432 223445788999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+++|.+++... ++++..+..++.+++.||+|||++ +++||||+|+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 99 EGGALTDIVTHT-----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred CCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence 999999998762 388999999999999999999999 999999999999999999999999998875432222
Q ss_pred ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||.... ............ ....
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~--------~~~~~~~~~~~~------~~~~ 235 (285)
T cd06648 171 -RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP--------PLQAMKRIRDNL------PPKL 235 (285)
T ss_pred -ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHhcC------CCCC
Confidence 1223458889999999988889999999999999999999999985311 111222111110 0000
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
. ........+.+++.+||+.+|++|||+.++++
T Consensus 236 ~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 236 K--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred c--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0 11113456899999999999999999999985
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.1e-37 Score=287.19 Aligned_cols=248 Identities=24% Similarity=0.309 Sum_probs=199.7
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
+|+..+.||.|+||.||++... +++.||+|.+...... .....+.+|++++++++||||+++++.+......++++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4777889999999999999976 5889999999754322 234578899999999999999999999998999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+.+++|..++... .++++..+..++.++++||.|||++ +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999998764 2488999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
. ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||..... ............
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~--------- 216 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR------TIRDQIRAKQET--------- 216 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCc------cHHHHHHHHhcc---------
Confidence 2 22234578899999999888899999999999999999999999964211 011111111111
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH--HHHH
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKM--SEVV 395 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~--~evl 395 (447)
.....+......+.+++.+||+.||.+||++ ++++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0011122234678899999999999999999 5554
No 323
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.6e-36 Score=286.38 Aligned_cols=262 Identities=22% Similarity=0.316 Sum_probs=195.0
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
|+..+.||.|++|.||+|... +|..||+|++...... .....+.+|+++++.++|+|++++++++.+....+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999875 6899999998754322 22346788999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
. ++|.+++..... ..+++..++.++.|+++||+|||++ +++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 4 689988865432 3489999999999999999999999 999999999999999999999999999976533221
Q ss_pred ceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc--------c
Q 013238 282 HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK--------K 352 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 352 (447)
. .....++..|+|||++.+. .++.++||||||+++|+|++|+.||..... ...+........... .
T Consensus 155 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 T-YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE----IDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred c-cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCChHHhhhhhh
Confidence 1 1223467889999988664 568999999999999999999999953211 001111111000000 0
Q ss_pred ccccccc--ccC----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDS--DME----GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~--~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+.... ... ..........+.+++.+||+.+|.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000 000 0011122356889999999999999999999985
No 324
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-36 Score=288.54 Aligned_cols=256 Identities=22% Similarity=0.388 Sum_probs=194.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 198 (447)
.++|+..+.||+|++|.||+|...+ ++.||||.++..........+..|++++.+.. |+||+++++++.+....+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4567888999999999999999874 89999999976543334445667777666665 999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+. ++|.+++..... ++++..+..++.+++.||+|||+.. +++||||+|+||++++++.+||+|||++.....
T Consensus 94 e~~~-~~l~~l~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 94 ELMS-TCLDKLLKRIQG---PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eccC-cCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 9984 577776655322 5899999999999999999999732 899999999999999999999999999876533
Q ss_pred CCCceeeccccccCccccccccCCC----CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGK----SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
... .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||..... ..+......... ..
T Consensus 168 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~-~~ 237 (296)
T cd06618 168 SKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT-------EFEVLTKILQEE-PP 237 (296)
T ss_pred CCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh-------HHHHHHHHhcCC-CC
Confidence 221 12234778999999987654 78899999999999999999999953110 011111111111 00
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
... ........+.+++.+||+.||.+|||+.++++.--
T Consensus 238 -----~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 238 -----SLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred -----CCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 000 01123456899999999999999999999987643
No 325
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.4e-36 Score=282.23 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=195.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc----ccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--Ccc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER----TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 194 (447)
.+|+..+.||+|++|.||+|... +++.||+|.+.... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888899999999999999875 58899999875321 122334688899999999999999999988764 457
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++++||+++++|.+++.... ++++..++.++.+++.||.|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 89999999999999986542 378899999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCC--CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 275 LMDYKD--THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 275 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
...... ........++..|+|||++.+..++.++||||||+++|+|++|+.||.... .... +...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~-~~~~----- 221 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-------AMAA-IFKI----- 221 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-------HHHH-HHHH-----
Confidence 653211 111123457889999999998889999999999999999999999995311 0001 1111
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.........+....+.+.+++.+||+ +|..|||+.+++.
T Consensus 222 ----~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 222 ----ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11111112233445668899999999 5799999998875
No 326
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.6e-36 Score=286.59 Aligned_cols=260 Identities=18% Similarity=0.228 Sum_probs=182.5
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC----CcEEEEEEeccccccch-H---------HHHHHHHHHHHhcCCCceeeEe
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGG-E---------LQFQTEVEMISMAVHRNLLRLR 185 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-~---------~~~~~e~~~l~~l~h~niv~l~ 185 (447)
..++|.+.++||+|+||+||+|...+ +..+|+|.......... + .....+...+..+.|+|+++++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 34678999999999999999998764 34566665432211100 0 0112233445667899999999
Q ss_pred eeeecCC----cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC
Q 013238 186 GFCMTPT----ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE 261 (447)
Q Consensus 186 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~ 261 (447)
+.+.... ..+++++++. .++.+.+.... ..++..++.++.|++.||+|||+. +++||||||+|||++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK----CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDG 161 (294)
T ss_pred EeeeEecCCceEEEEEEehhc-cCHHHHHHhhc----cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC
Confidence 8765443 2367777763 35555554322 256788899999999999999999 9999999999999999
Q ss_pred CCcEEEeecCCccccCCCCCc------eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCC
Q 013238 262 EFEAVVGDFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 335 (447)
Q Consensus 262 ~~~~kl~Dfgl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~ 335 (447)
++.++|+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~--- 238 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH--- 238 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc---
Confidence 999999999999865422211 11223589999999999999999999999999999999999999964211
Q ss_pred CcccHHHHH-HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 013238 336 DDVMLLDWV-KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 399 (447)
Q Consensus 336 ~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 399 (447)
........ .... .++...... .......+.+++..||+.+|++||++.++++.|+
T Consensus 239 -~~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 239 -NGNLIHAAKCDFI-----KRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred -chHHHHHhHHHHH-----HHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 11111100 0110 111111111 1122466889999999999999999999998874
No 327
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.8e-36 Score=278.56 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=202.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceEEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVY 198 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 198 (447)
+|...+.||+|++|.||+|... +++.|++|.+..... ......+.+|++++++++|+||+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677789999999999999986 688999999865432 23345688999999999999999999999887 7889999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+++|.+++.... .+++..++.++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999999987653 589999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCc-eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.... ......++..|+|||.+.+...+.++||||||+++++|++|..||.... ...........
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~-------- 218 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-------NPMAALYKIGS-------- 218 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------chHHHHHhccc--------
Confidence 3321 1223457889999999988889999999999999999999999996421 11111111110
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.......+......+.+++.+|++.+|.+||++.++++
T Consensus 219 -~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 219 -SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 01111122233567999999999999999999999986
No 328
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-37 Score=316.72 Aligned_cols=251 Identities=25% Similarity=0.399 Sum_probs=188.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC--------
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-------- 191 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 191 (447)
..+|+.++.||+|+||.||+++.+ ||+.||||++...........+.+|+..+++++|||||+++..+.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 457888899999999999999987 89999999998665444555688999999999999999987422100
Q ss_pred --------------------------------------------------------------------------------
Q 013238 192 -------------------------------------------------------------------------------- 191 (447)
Q Consensus 192 -------------------------------------------------------------------------------- 191 (447)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013238 192 -------------------------------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 240 (447)
Q Consensus 192 -------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH 240 (447)
..+|+-||||+..+|.++++.+.-. -.....++++.+|++||+|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHHHHH
Confidence 0126778888887777777654321 146778999999999999999
Q ss_pred hCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC-----------------CCCCceeeccccccCccccccccCC-
Q 013238 241 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-----------------YKDTHVTTAVRGTIGHIAPEYLSTG- 302 (447)
Q Consensus 241 ~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~- 302 (447)
+. |+|||||||.|||+|+++.|||+|||+++... .......+..+||.-|+|||++.+.
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 99999999999999999999999999998621 0011133455799999999999764
Q ss_pred --CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC--CCcHHHHHHHHHHHH
Q 013238 303 --KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG--NYIEEEVEQLIQVAL 378 (447)
Q Consensus 303 --~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~l~~li~ 378 (447)
+|+.|+|+||||||++||+. ||... +-+...+..+.+..+.. .+..+....=.++|.
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts----------------MERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~ 852 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTS----------------MERASILTNLRKGSIPEPADFFDPEHPEEASLIR 852 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCch----------------HHHHHHHHhcccCCCCCCcccccccchHHHHHHH
Confidence 49999999999999999996 56431 11111122222222221 123334445567899
Q ss_pred HccCCCCCCCCCHHHHHH
Q 013238 379 LCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 379 ~cl~~dP~~RPt~~evl~ 396 (447)
++++.||.+|||+.|+|.
T Consensus 853 ~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 853 WLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHhcCCCccCCCHHHHhh
Confidence 999999999999999875
No 329
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.7e-36 Score=293.00 Aligned_cols=266 Identities=20% Similarity=0.247 Sum_probs=195.5
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecC------
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------ 191 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 191 (447)
..++|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999875 68999999986432 222334577899999999999999999987643
Q ss_pred CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
...++||||+. ++|.+.+... ++...+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 24689999995 5787777532 78889999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccC----------CCcccHH
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN----------DDDVMLL 341 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~----------~~~~~~~ 341 (447)
+++....... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||....... .......
T Consensus 164 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 164 LARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred cceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9986543221 223347889999999999999999999999999999999999995321100 0000000
Q ss_pred HHH----HHHhhcc------ccccccccccC----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 342 DWV----KGLLKEK------KLEQLVDSDME----GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 342 ~~~----~~~~~~~------~~~~~~d~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
... ....... ...++...... ..........+.+++.+||+.||.+|||+.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0000000 00000000000 00011235567899999999999999999999863
No 330
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.2e-36 Score=288.03 Aligned_cols=261 Identities=25% Similarity=0.340 Sum_probs=191.1
Q ss_pred Ceeeec--CCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRG--GFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
..||+| +||+||++... +|+.||+|.+..... ......+.+|+.+++.++||||+++++++...+..++++||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 89999999875 689999999875432 22345688899999999999999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc-
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH- 282 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~- 282 (447)
++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 999999876532 2488999999999999999999999 9999999999999999999999999865322111100
Q ss_pred -e----eeccccccCccccccccCC--CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH---------
Q 013238 283 -V----TTAVRGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG--------- 346 (447)
Q Consensus 283 -~----~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--------- 346 (447)
. .....++..|+|||++.+. .++.++|||||||++|||++|+.||..... ..........
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLR----TQMLLQKLKGPPYSPLDIT 234 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcCh----HHHHHHHhcCCCCCCcccc
Confidence 0 0011245679999998764 478999999999999999999999953210 0000000000
Q ss_pred -------H-------h---------hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 347 -------L-------L---------KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 347 -------~-------~---------~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. . .......+.+..+.......+...+.+++.+||+.||.+|||+.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 0 0000000111111112233456778999999999999999999999863
No 331
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.6e-36 Score=287.01 Aligned_cols=263 Identities=25% Similarity=0.348 Sum_probs=194.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecC--CcceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 196 (447)
.++|+..+.||+|+||.||+|... +|+.||+|.++..... .....+.+|+.++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357888999999999999999975 5899999998654322 2233466899999999999999999998754 45799
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
||||+. ++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 86 v~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 999996 47888876543 3489999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc--
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL-- 353 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 353 (447)
...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.... .......+.........
T Consensus 159 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~-----~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07845 159 GLPAKP-MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS-----EIEQLDLIIQLLGTPNESI 232 (309)
T ss_pred CCccCC-CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCChhh
Confidence 433211 122235778999999865 457899999999999999999999995321 11111111111100000
Q ss_pred ----------ccccccccCCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 354 ----------EQLVDSDMEGNY----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 354 ----------~~~~d~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
............ .......+.+++.+||+.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 233 WPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred chhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000000 0112456788999999999999999999986
No 332
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.3e-36 Score=283.39 Aligned_cols=242 Identities=26% Similarity=0.344 Sum_probs=188.9
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
||+|+||+||++... +|+.+|+|.+..... ......+..|+++++.++|||++++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 688999999865321 22233567899999999999999999999988999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeec
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 286 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 286 (447)
.+++..... ..+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++..... ......
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~ 153 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKG 153 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccc
Confidence 999876543 3489999999999999999999999 999999999999999999999999999876532 112223
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
..++..|+|||++.+..++.++||||||+++|+|++|+.||..... ........... .. ......
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~---------~~--~~~~~~ 218 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKE----KVEKEELKRRT---------LE--MAVEYP 218 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcc----cccHHHHHhcc---------cc--ccccCC
Confidence 3477899999999888899999999999999999999999953211 00111110000 00 001112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHH
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPKMSE 393 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt~~e 393 (447)
......+.+++.+||+.+|.+||+..+
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCc
Confidence 223556889999999999999994444
No 333
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=324.96 Aligned_cols=253 Identities=27% Similarity=0.370 Sum_probs=199.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEE-CCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
+-++....+||.|.||.||-|.. .+|...|+|-++..... ..-....+|+.++..++|||+|+++|+=..++..++.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 34666778999999999999985 46999999988644332 22335778999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
|||.+|+|.+.++..+. .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|..+..
T Consensus 1314 EyC~~GsLa~ll~~gri----~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRI----EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHhccCcHHHHHHhcch----hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 99999999999976543 67777788889999999999999 999999999999999999999999999987754
Q ss_pred CCCc---eeeccccccCccccccccCC---CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 279 KDTH---VTTAVRGTIGHIAPEYLSTG---KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 279 ~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
.... ......||+.|||||++.+. ....+.||||+|||+.||+||++||...+ .+|. -+++-
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d---------ne~a-IMy~V-- 1454 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD---------NEWA-IMYHV-- 1454 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc---------chhH-HHhHH--
Confidence 4211 12234699999999999764 35678999999999999999999996421 1111 11110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
...-.+..+......-.+++..|+..||.+|.++.|+++.
T Consensus 1455 -----~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1455 -----AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -----hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 0111123333455667789999999999999998877653
No 334
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.5e-36 Score=283.27 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=196.2
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
||+|+||.||++... +|+.+++|.+..... ......+.+|++++++++|+|++++++.+......+++|||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 489999999865432 13344688899999999999999999999888899999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC-----
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT----- 281 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~----- 281 (447)
.+++.... .+++..++.++.||++||+|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENVG----SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 99997643 489999999999999999999999 999999999999999999999999999875433211
Q ss_pred --ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccc
Q 013238 282 --HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 359 (447)
Q Consensus 282 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 359 (447)
.......++..|+|||.+.+...+.++||||||+++|+|++|..||.... .......... .
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~-~-------- 216 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET--------PEEIFQNILN-G-------- 216 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhc-C--------
Confidence 12223447889999999988889999999999999999999999995321 1111111111 0
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 360 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 360 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
.............+.+++.+||+.+|.+|||+..+.+.|+--
T Consensus 217 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~ 258 (265)
T cd05579 217 KIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHP 258 (265)
T ss_pred CcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCc
Confidence 000000111246689999999999999999997777777643
No 335
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=299.20 Aligned_cols=201 Identities=29% Similarity=0.408 Sum_probs=173.9
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC------Ccce
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------TERL 195 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 195 (447)
.+...+.||+|+||.||+|+.+ +|+.||||.++............+|++++++++|+|||+++++=.+. ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3455678999999999999965 79999999998876666667788999999999999999999875433 3568
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC--CC--cEEEeecC
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE--EF--EAVVGDFG 271 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~--~~--~~kl~Dfg 271 (447)
++||||.+|+|...|+..... ..+++...+.++.+++.||.|||++ +|+||||||.||++-. +| .-||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~-~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENA-YGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCcccc-cCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 999999999999999876433 3599999999999999999999999 9999999999999843 23 47999999
Q ss_pred CccccCCCCCceeeccccccCcccccccc-CCCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
.|+.++.. ......+||..|++||.+. .+.|+..+|.|||||++|+++||..||..
T Consensus 170 ~Arel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 170 AARELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ccccCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 99987543 3667788999999999998 47889999999999999999999999964
No 336
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.8e-36 Score=285.31 Aligned_cols=264 Identities=23% Similarity=0.327 Sum_probs=192.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCc-----
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE----- 193 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 193 (447)
-++|+..+.||+|+||.||+|... +++.||||.+..... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357888999999999999999876 689999999864432 2223356689999999999999999999876543
Q ss_pred ---ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 194 ---RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 194 ---~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
.++||||+. ++|...+.... ..+++..++.++.|++.||+|||++ +++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 489999995 57877776532 2489999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCc---eeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHH
Q 013238 271 GLAKLMDYKDTH---VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 271 gl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
|++......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.... .......+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~-----~~~~~~~~~~ 238 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT-----EQHQLTLISQ 238 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHH
Confidence 999765432221 11223467889999988665 46889999999999999999999985321 1111111111
Q ss_pred Hhh---ccccc-----ccccc-ccCCCC---------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 347 LLK---EKKLE-----QLVDS-DMEGNY---------IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 347 ~~~---~~~~~-----~~~d~-~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
... ..... ...+. ...... .......+.+++.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 110 00000 00000 000000 0011245678999999999999999999885
No 337
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.3e-36 Score=283.49 Aligned_cols=262 Identities=21% Similarity=0.292 Sum_probs=193.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++|+..+.||+|.+|.||+|... +|+.||+|.+...... .....+.+|+++++.++|+||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999976 6889999998654322 223467889999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC-CCcEEEeecCCccccCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~ 278 (447)
|+. ++|.+++..... ..+++..++.++.||+.||+|||++ +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 995 578777754332 2367888899999999999999999 9999999999999985 56799999999976533
Q ss_pred CCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.. .......++..|+|||++.+. .++.++||||||+++|+|+||+.||..... ....... ....... .....
T Consensus 156 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~----~~~~~~~-~~~~~~~-~~~~~ 228 (294)
T PLN00009 156 PV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE----IDELFKI-FRILGTP-NEETW 228 (294)
T ss_pred Cc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHH-HHHhCCC-Chhhc
Confidence 21 112223467899999988664 578999999999999999999999953110 0000000 0000000 00000
Q ss_pred c------------cccCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 358 D------------SDMEGN----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 358 d------------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+ +..... ........+.+++.+|++.+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000000 01122355889999999999999999999986
No 338
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.5e-36 Score=286.87 Aligned_cols=249 Identities=28% Similarity=0.388 Sum_probs=193.4
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
.|...+.||+|++|.||+|... +++.+|+|.+.... .......+.+|+++++.++|+|++++.+++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3556678999999999999975 57889999986432 22223467789999999999999999999999999999999
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+. |+|.+.+.... .++++..+..++.+++.||.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~---~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 996 68877765432 2488999999999999999999999 9999999999999999999999999998765322
Q ss_pred CCceeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccc
Q 013238 280 DTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 356 (447)
Q Consensus 280 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
....++..|+|||.+. ...++.++|||||||++|+|++|+.||.... ............
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~----- 230 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNE----- 230 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc--------HHHHHHHHhhcC-----
Confidence 2234788999999874 3567889999999999999999999984311 011111111100
Q ss_pred cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 357 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 357 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
............+.+++.+||+.+|.+||++.++++...-
T Consensus 231 ----~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 231 ----SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred ----CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 0011112334568899999999999999999999986443
No 339
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=9.8e-36 Score=285.35 Aligned_cols=258 Identities=24% Similarity=0.310 Sum_probs=187.3
Q ss_pred eeeecCCeEEEEEEECCCcEEEEEEeccc-cccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcch
Q 013238 129 ILGRGGFGKVYKGRLTDGSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA 207 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 207 (447)
.+|.|+++.|+++.. +++.||||++... ........+..|+++++.++|+||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 344444545555444 5899999999754 23334457889999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC------
Q 013238 208 SCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT------ 281 (447)
Q Consensus 208 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~------ 281 (447)
+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+........
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 88 DLLKTHFP--EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 99976532 2388999999999999999999999 999999999999999999999999998865432111
Q ss_pred ceeeccccccCccccccccCC--CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHh----hcc----
Q 013238 282 HVTTAVRGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL----KEK---- 351 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~---- 351 (447)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||.... ......+...... ...
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMP----ATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhccCccccccCchhh
Confidence 111223467789999998763 57889999999999999999999996321 0011111110000 000
Q ss_pred ---cccc----ccccc----cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 352 ---KLEQ----LVDSD----MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 352 ---~~~~----~~d~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.... ..+.. ............+.+++.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0000 00000 001112234467889999999999999999999887
No 340
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.7e-36 Score=282.50 Aligned_cols=265 Identities=26% Similarity=0.361 Sum_probs=195.6
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEEecc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
|++.+.||+|++|+||+|... +++.|+||++.............+|+..+.+++ |+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566788999999999999986 478899999876543333334567899999999 999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
+|+|.+.+.... ...+++..++.++.|++.+|.|||++ +++|+||+|+||++++++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 889998887643 23489999999999999999999999 999999999999999999999999999976543221
Q ss_pred ceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCC--------CcccHHHHHHHHhhccc
Q 013238 282 HVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLAND--------DDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 352 (447)
.....++..|+|||++.+ ..++.++|+||||+++|||++|+.||........ .......|.........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 122347889999998754 4578999999999999999999999853211000 00000011111110111
Q ss_pred cccccccccCC---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 LEQLVDSDMEG---NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
....+...... .........+.+++.+||+.+|.+|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 11110000000 000112356889999999999999999999875
No 341
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.5e-36 Score=283.01 Aligned_cols=259 Identities=25% Similarity=0.315 Sum_probs=201.3
Q ss_pred CCCCCCeeeecCCeEEEEEEEC----CCcEEEEEEeccccc---cchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERT---QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 194 (447)
+|+..+.||+|++|.||++... +++.||||.++.... ......+..|++++.++ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3667789999999999999753 468899999864322 22234578899999999 599999999999888889
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++||||+.+|+|.+++.... .+++..++.++.|+++||.|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 99999999999999886532 488999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCceeeccccccCccccccccCCC--CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
..............|+..|+|||.+.+.. .+.++||||||+++|||++|..||.... ...............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~----~~~~~~~~~~~~~~~-- 227 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG----EQNSQSEISRRILKS-- 227 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc----ccchHHHHHHHHHcc--
Confidence 65443332233345788999999987665 7889999999999999999999995311 111111221221111
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 403 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 403 (447)
.. .........+.+++.+||+.+|++|||+.++.+.|+..-+
T Consensus 228 -----~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~ 269 (288)
T cd05583 228 -----KP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFF 269 (288)
T ss_pred -----CC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccc
Confidence 01 1111233557889999999999999999999988887544
No 342
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.2e-35 Score=280.25 Aligned_cols=260 Identities=23% Similarity=0.304 Sum_probs=197.2
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
|+..+.||+|++|.||++... +++.+++|.+...... .....+..|+++++.++|+||+++++++......++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456788999999999999875 6889999998654322 23456788999999999999999999999999999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
.+ +|..++.... .++++..++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 65 8888876643 2489999999999999999999999 99999999999999999999999999987664432
Q ss_pred ceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc---ccccccc
Q 013238 282 HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE---KKLEQLV 357 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 357 (447)
.......++..|+|||.+.+. .++.++||||||+++|+|+||+.||..... ..........+.. .....+.
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-----IDQLFKIFRTLGTPDPEVWPKFT 227 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCchHhcccch
Confidence 122223477889999998776 789999999999999999999999853211 0010000000000 0000000
Q ss_pred c---------cccC----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 358 D---------SDME----GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 358 d---------~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+ +... ..........+.+++.+||+.||.+||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 228 SLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 0000 0112234577999999999999999999999985
No 343
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7.8e-36 Score=276.68 Aligned_cols=248 Identities=26% Similarity=0.444 Sum_probs=200.1
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|+..+.||+|.+|.||++... +++.|++|.+...... .....+.+|++++.+++|+|++++++++.+....+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777889999999999999876 5789999999765432 2344688999999999999999999999988899999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+++++|.+++... .++++..++.++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999998764 2489999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 360 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 360 (447)
.. .....++..|+|||...+..++.++||||||+++|+|++|..||.... ..... ..... ..
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-------~~~~~-~~~~~-~~-------- 215 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN-------PMAAL-FRIVQ-DD-------- 215 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-------HHHHH-HHHhc-cC--------
Confidence 22 223457889999999988888999999999999999999999985311 01111 11100 00
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 361 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 361 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...........+.+++.+||+.+|++|||+.+++.
T Consensus 216 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 216 -HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 01111223456889999999999999999999875
No 344
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3e-36 Score=280.85 Aligned_cols=251 Identities=23% Similarity=0.326 Sum_probs=195.8
Q ss_pred CCCCCCeeeecCCeEEEEEEECC-CcEEEEEEecccc----ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEER----TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
+|.+.+.||+|+||.||++.... +..+++|.++... .......+..|+.+++.++||||+++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788999999999999998753 4456666654321 122334567789999999999999999999888889999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||+++++|.+++.........+++..++.++.|++.||.|||+. +++|+||+|+||++++ +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999876444445699999999999999999999999 9999999999999986 569999999987654
Q ss_pred CCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.... ......++..|+|||.+.+..++.++|+||||+++|+|++|..||... ............
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~------- 220 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ--------NFLSVVLRIVEG------- 220 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHHcC-------
Confidence 3221 222345788999999998888899999999999999999999998521 111111111111
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
............+.+++.+||+.+|++||++.++++
T Consensus 221 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 221 ---PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 011122344567899999999999999999999986
No 345
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.9e-35 Score=275.38 Aligned_cols=247 Identities=23% Similarity=0.306 Sum_probs=189.7
Q ss_pred HHHHhhCCCCCCee--eecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHh-cCCCceeeEeeeeecCC
Q 013238 117 LQVATDNFSNRNIL--GRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPT 192 (447)
Q Consensus 117 ~~~~~~~~~~~~~l--g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~ 192 (447)
.....++|++.+.+ |+|+||.||++... ++..+|+|.+....... .|+..... .+|+|++++++.+...+
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence 33344667777766 99999999999875 67889999986532211 12222222 26999999999999999
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC-cEEEeecC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFG 271 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg 271 (447)
..++||||+++++|.+++.... ++++..++.++.|+++||.|||+. +++||||||+||+++.++ .++|+|||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 9999999999999999997643 589999999999999999999999 999999999999999998 99999999
Q ss_pred CccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 351 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (447)
++....... ...++..|+|||++.+..++.++||||||+++|||++|+.||.... ........+.... ..
T Consensus 156 ~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~--~~ 225 (267)
T PHA03390 156 LCKIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE---DEELDLESLLKRQ--QK 225 (267)
T ss_pred cceecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---cchhhHHHHHHhh--cc
Confidence 987654321 2347889999999999899999999999999999999999996321 1111122221111 00
Q ss_pred ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 013238 352 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-MSEVVR 396 (447)
Q Consensus 352 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~ 396 (447)
. ..........+.+++.+||+.+|.+||+ ++++++
T Consensus 226 --------~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 --------K--LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred --------c--CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0 0111234556899999999999999996 588774
No 346
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.8e-36 Score=278.49 Aligned_cols=246 Identities=21% Similarity=0.259 Sum_probs=188.7
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHH-HHhcCCCceeeEeeeeecCCcceEEEecccC
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEM-ISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+.||+|++|.||+|... +++.||+|.+...... .....+..|..+ .....|+|++++++++...+..++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999875 5889999998654321 112233444443 3456899999999999998999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
++|.+++.... ++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 99999997543 488999999999999999999999 999999999999999999999999999875432
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
.....++..|+|||.+.+..++.++||||||+++|||++|..||.... ........... ... ...
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~-~~~------~~~ 214 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET--------PDAVFDNILSR-RIN------WPE 214 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhc-ccC------CCC
Confidence 122347889999999988888999999999999999999999995311 11111111110 000 001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.........+.+++.+||+.+|.+|||+.++.+.|.-
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 1111234668999999999999999988777666554
No 347
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.4e-35 Score=284.01 Aligned_cols=245 Identities=28% Similarity=0.402 Sum_probs=191.1
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
|...+.||+|+||+||+|+.. +++.|++|.+..... ......+.+|+++++.++|+|++++++++.+....+++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 566678999999999999875 588999999864322 22234678899999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
+. |+|.+++.... .++++..++.++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 95 57777775432 2489999999999999999999999 999999999999999999999999999864321
Q ss_pred CceeeccccccCcccccccc---CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.....|+..|+|||++. ...++.++||||||+++|||++|..||.... ....+....... ..
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~-~~--- 238 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQND-SP--- 238 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcC-CC---
Confidence 12345788999999984 4567889999999999999999999985311 111111111110 00
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
..........+.+++.+||+.+|.+||++.++++.
T Consensus 239 -----~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 239 -----TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111223458889999999999999999999864
No 348
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-36 Score=292.61 Aligned_cols=250 Identities=24% Similarity=0.359 Sum_probs=206.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccch-HHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGG-ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
...|.+.+.||+|.|++|.+|+.. ++..||||.+.+...... ...+.+|+++++.++|||||+++.+......+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 357888899999999999999875 689999999977654332 345789999999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
||+.+|.+.+++...+. ..+.....++.|+..|++|||++ .|+|||||.+||||+.+..+||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999988765 44578888999999999999999 999999999999999999999999999998763
Q ss_pred CCCceeeccccccCccccccccCCCC-CchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.......+|++.|.|||++.+..| .+++|+||+|++||-|+.|..||+...+ ..+-
T Consensus 208 --~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l---------------------k~Lr 264 (596)
T KOG0586|consen 208 --GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL---------------------KELR 264 (596)
T ss_pred --cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc---------------------cccc
Confidence 344556679999999999999877 6899999999999999999999974221 1111
Q ss_pred ccccCCCC--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 358 DSDMEGNY--IEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 358 d~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
+..+.+.+ +.....++-+++++++-.+|.+|++++++..--..
T Consensus 265 ~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 265 PRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred chheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 11111111 11223457778889999999999999988765443
No 349
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-35 Score=280.85 Aligned_cols=252 Identities=26% Similarity=0.348 Sum_probs=194.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC----CCcEEEEEEeccccc---cchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERT---QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 194 (447)
+|+..+.||+|+||.||++... +|+.||+|++..... ......+.+|++++..+ +|+||+++++.+......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4677889999999999999863 688999999865322 12234678899999999 599999999999888889
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++||||+++++|.+++.... ++++..+..++.|++.||.|||+. +++||||+|+|||++.++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE----RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 99999999999999987542 478899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccCccccccccCC--CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
..............|+..|+|||.+.+. .++.++||||||+++|+|++|..||.... .......+........
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~----~~~~~~~~~~~~~~~~- 228 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG----EKNSQAEISRRILKSE- 228 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC----ccccHHHHHHHhhccC-
Confidence 6543322222334578899999998753 46789999999999999999999995311 1111222222221110
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
...+......+.+++.+||+.+|.+|| ++.+++.
T Consensus 229 ----------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 ----------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 011122345688999999999999997 5666654
No 350
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.1e-35 Score=277.93 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=192.4
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-hHHHHHHHHHHHHhc---CCCceeeEeeeeecCCc-----
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMA---VHRNLLRLRGFCMTPTE----- 193 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 193 (447)
|+..+.||+|+||.||+|+.. +++.+|+|.++...... ....+.+|++++.++ +|+|++++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 556788999999999999987 48999999997543322 233456677766555 69999999999987766
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
.+++|||+. ++|.+++..... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 899999996 488888865432 2489999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 274 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 274 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
........ .....++..|+|||++.+..++.++||||||+++|||++|+.||.... .......+..........
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 155 RIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS----EADQLDKIFDVIGLPSEE 228 (287)
T ss_pred eeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC----hHHHHHHHHHHcCCCChH
Confidence 76543321 122346888999999999899999999999999999999999985311 111111111111000000
Q ss_pred c---------cccccccC---CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 354 E---------QLVDSDME---GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 354 ~---------~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
. ........ ..........+.+++.+||+.||.+||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 00000000 0111233466789999999999999999999885
No 351
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=8.5e-36 Score=285.16 Aligned_cols=264 Identities=23% Similarity=0.310 Sum_probs=191.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCceeeEeeeeecCC------
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ 192 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 192 (447)
.++|+..+.||+|++|.||+|... +++.+|+|.+....... ....+.+|+++++.++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468899999999999999999976 58899999986543222 2335678999999999999999998875443
Q ss_pred --cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 193 --ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 193 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
..+++|+|+.+ +|...+.... ..+++..++.++.|+++||+|||++ +++|+||||+||++++++.++|+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS---VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 35899999964 6666665432 2489999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCc----------eeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCccc
Q 013238 271 GLAKLMDYKDTH----------VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 339 (447)
Q Consensus 271 gl~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~ 339 (447)
|++......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||..... ..
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~-----~~ 234 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD-----ID 234 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH-----HH
Confidence 999765432211 11223467889999987654 578999999999999999999999853211 11
Q ss_pred HHHHHHHHhhcc---------cccccc----ccccCCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 340 LLDWVKGLLKEK---------KLEQLV----DSDMEGN---YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 340 ~~~~~~~~~~~~---------~~~~~~----d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
....+....... ...... ....... ........+.+++.+||+.||.+|||+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 235 QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 111111100000 000000 0000000 00112256889999999999999999998875
No 352
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=298.03 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=196.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+.|+++..||.|+||.||+|..++ +-..|-|.+... .......++-|+++|....||+||++++.|.-.+.+|++.||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk-seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK-SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc-chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 456666779999999999998774 444566766433 233345688999999999999999999998889999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
|.||.....+-..+ .++.+..+..++.+++.||.|||++ +|+|||||..|||++-+|.++|+|||.+.... ..
T Consensus 111 C~GGAVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-~t 183 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-ST 183 (1187)
T ss_pred cCCchHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch-hH
Confidence 99999988876543 3499999999999999999999999 99999999999999999999999999885432 12
Q ss_pred CceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
......+.||++|||||+.. ..+|+.++||||||++|.||..+.+|-...+.. ..+-..-+ .....
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM--------RVllKiaK-SePPT 254 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAK-SEPPT 254 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH--------HHHHHHhh-cCCCc
Confidence 22344566999999999864 568999999999999999999999987432110 00000000 00011
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+ -.+......+.+++..||..||..||++.++++.
T Consensus 255 L-------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 255 L-------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred c-------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1 1233455678899999999999999999998863
No 353
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.2e-36 Score=289.21 Aligned_cols=264 Identities=20% Similarity=0.324 Sum_probs=196.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeec----CCcc
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTER 194 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 194 (447)
.++|+..+.||+|++|.||+|... +|+.||+|++..... ......+.+|+.+++.++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368899999999999999999875 589999999875432 2234467789999999999999999988753 3457
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++||||+. ++|.+++.... .+++..++.++.||+.||+|||+. +++||||||+||++++++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ----PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 89999995 68888876432 389999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCc---eeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 275 LMDYKDTH---VTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 275 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~-----~~~~~~~~~~~g~ 230 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY-----VHQLKLILSVLGS 230 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh-----HHHHHHHHHHhCC
Confidence 65432211 1123457889999998865 4588999999999999999999999953211 0111111110000
Q ss_pred -----------ccccccccc-ccCCC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 351 -----------KKLEQLVDS-DMEGN-----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 351 -----------~~~~~~~d~-~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.......+. ..... ........+.+++.+||+.+|.+|||+.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 231 PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred ChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000 00000 012235678999999999999999999998874
No 354
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.5e-36 Score=283.99 Aligned_cols=243 Identities=21% Similarity=0.340 Sum_probs=192.7
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
.+||+|+||.||++... +++.||||.+.... ......+.+|+.+++.++|+|++++++++...+..+++|||+++++|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 56999999999999875 68899999885432 23345688899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeec
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 286 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 286 (447)
.+++... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++........ ....
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~ 175 (292)
T cd06657 105 TDIVTHT-----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKS 175 (292)
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc-cccc
Confidence 9887542 378999999999999999999999 999999999999999999999999999875533221 1233
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
..++..|+|||.+.+..++.++||||||+++|+|++|..||.... . ...+...... ...... ..
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~-----~---~~~~~~~~~~------~~~~~~--~~ 239 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----P---LKAMKMIRDN------LPPKLK--NL 239 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H---HHHHHHHHhh------CCcccC--Cc
Confidence 457889999999988888999999999999999999999985311 1 1111111000 001100 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
......+.+++.+||+.+|.+||++.++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 112345788999999999999999999887
No 355
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.2e-35 Score=286.31 Aligned_cols=267 Identities=22% Similarity=0.299 Sum_probs=195.8
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeec-CCcc
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT-PTER 194 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 194 (447)
...+++|+..+.||.|+||.||++... +++.||||++..... ......+..|++++..++|||++++.+++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 345778999999999999999999866 689999998864322 2234567789999999999999999998875 4578
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++++||+ +++|..++... ++++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||++.
T Consensus 86 ~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 8999998 66888887542 378888899999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCC-------CcccHHHHHHH
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-------DDVMLLDWVKG 346 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~-------~~~~~~~~~~~ 346 (447)
..... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||........ ......++...
T Consensus 157 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 157 IQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 54321 122346788999998766 5689999999999999999999999953211000 00000011111
Q ss_pred HhhccccccccccccCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 347 LLKEKKLEQLVDSDMEGNYI-----EEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
........-+.........+ ......+.+++.+||+.+|++|||+.+++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11110000000000000111 1134678999999999999999999998764
No 356
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.4e-35 Score=279.17 Aligned_cols=242 Identities=27% Similarity=0.355 Sum_probs=184.5
Q ss_pred eeeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHH---HHHHhcCCCceeeEeeeeecCCcceEEEeccc
Q 013238 129 ILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEV---EMISMAVHRNLLRLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 202 (447)
.||+|+||.||++... +++.||+|.+...... .....+..|. ..++...|+||+.+.+++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999875 5889999998654322 1112233333 34445679999999999999999999999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
+|+|..++.... .+++..++.++.|++.||+|||+. +++||||||+||++++++.++|+|||++........
T Consensus 81 g~~L~~~l~~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~- 152 (278)
T cd05606 81 GGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (278)
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-
Confidence 999998886432 489999999999999999999999 999999999999999999999999999875432221
Q ss_pred eeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccccccc
Q 013238 283 VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 361 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 361 (447)
....|+..|+|||++.++ .++.++||||||+++|||++|+.||...... ..... ...... ....
T Consensus 153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~-----~~~~~-~~~~~~------~~~~- 217 (278)
T cd05606 153 --HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEI-DRMTLT------MAVE- 217 (278)
T ss_pred --cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc-----chHHH-HHHhhc------cCCC-
Confidence 223588999999998754 6889999999999999999999999642111 00010 000000 0111
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 013238 362 EGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 396 (447)
Q Consensus 362 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 396 (447)
.+......+.+++.+|+..+|.+|| ++.++++
T Consensus 218 ---~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 218 ---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1112346688999999999999999 8888875
No 357
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.4e-35 Score=287.06 Aligned_cols=264 Identities=21% Similarity=0.311 Sum_probs=194.6
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhc-CCCceeeEeeeeecC--Ccc
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTP--TER 194 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 194 (447)
..++|+..+.||+|+||.||+|... +++.+|+|++.... .......+.+|+.+++.+ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888899999999999999976 58899999885432 222234567899999999 999999999988653 357
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++||||+. ++|..++... .+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999996 5888887653 378999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----ceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHh-
Q 013238 275 LMDYKDT----HVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL- 348 (447)
Q Consensus 275 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 348 (447)
....... .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-----~~~~~~~~~~~ 230 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-----NQLEKIIEVIG 230 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhC
Confidence 6543321 12223457889999998765 45788999999999999999999999532110 0000000000
Q ss_pred ----------hccccccccc----cccC--CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 349 ----------KEKKLEQLVD----SDME--GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 349 ----------~~~~~~~~~d----~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.......+++ .... ..........+.+++.+||+.+|.+|||+.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000110 0000 00111134668999999999999999999999873
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.4e-35 Score=286.25 Aligned_cols=261 Identities=21% Similarity=0.309 Sum_probs=197.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----cce
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERL 195 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 195 (447)
+|.+.+.||+|++|.||+|... +++.+|||.+..... ......+.+|+++++.++|+||+++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5778899999999999999976 489999999875432 333456888999999999999999999987765 789
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
++|+|+. ++|.+++.... ++++..++.++.+++.||+|||+. +++|+||||+|||++.++.++|+|||++..
T Consensus 81 lv~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999997 58888886533 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--ceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 276 MDYKDT--HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 276 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
...... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||..... ......+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~ 227 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY-----IDQLNLIVEVLGTPS 227 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH-----HHHHHHHHHhcCCCC
Confidence 654321 112233478899999999887 789999999999999999999999953211 001111111000000
Q ss_pred -----------ccccccc-ccCC-----CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 -----------LEQLVDS-DMEG-----NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 -----------~~~~~d~-~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
....+.. .... .........+.+++.+||+.+|.+|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 228 EEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0000000 0000 001123466889999999999999999999985
No 359
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=273.98 Aligned_cols=256 Identities=21% Similarity=0.318 Sum_probs=196.7
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHH-hcCCCceeeEeeeeecCCcceEEEecc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
.+.+..||.|.||+|++-.++ .|+..|||+++.........+++.|.+... .-+.||||+++|.+..++..|+.||.|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 334456999999999999876 699999999988777666778889998654 456899999999999999999999999
Q ss_pred cCCcchhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 202 VNGSVASCLRER-GQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 202 ~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
.-+|..+.... ......+++..+..|....+.||.||.... .|+|||+||+|||+|..|.+||||||++..+..+
T Consensus 146 -d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S- 221 (361)
T KOG1006|consen 146 -DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS- 221 (361)
T ss_pred -hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH-
Confidence 44666544321 112234889999999999999999999876 8999999999999999999999999999765432
Q ss_pred CceeeccccccCccccccccC--CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 281 THVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
-..+...|...|||||.+.. ..|+.+|||||||++|+|+.||+.|++.. .+..+-+.......... +.
T Consensus 222 -iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w-------~svfeql~~Vv~gdpp~-l~- 291 (361)
T KOG1006|consen 222 -IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW-------DSVFEQLCQVVIGDPPI-LL- 291 (361)
T ss_pred -HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH-------HHHHHHHHHHHcCCCCe-ec-
Confidence 22334458889999999854 35899999999999999999999999531 11223333332221111 11
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...........+.+++..|+.+|-.+||...++.+
T Consensus 292 ---~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 292 ---FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ---CcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 11122345667999999999999999999998876
No 360
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.2e-36 Score=282.07 Aligned_cols=249 Identities=23% Similarity=0.363 Sum_probs=199.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 197 (447)
++|...+.||+|++|.||++... +++.||+|.+..... ......+..|.+++.+++ |+||+++++++......+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36788899999999999999876 689999999865322 223346788999999998 99999999999988999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|||+.+++|.+++.... .+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 99999999999997643 489999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCC-------------------ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcc
Q 013238 278 YKDT-------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 338 (447)
Q Consensus 278 ~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~ 338 (447)
.... .......++..|+|||++.+..++.++||||||++++++++|+.||.... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~- 227 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-----E- 227 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc-----H-
Confidence 3221 12223347889999999988889999999999999999999999996421 0
Q ss_pred cHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 013238 339 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM----SEVVR 396 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~----~evl~ 396 (447)
......... .....+......+.+++.+||+.+|.+|||+ .++++
T Consensus 228 --~~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 --YLTFQKILK-----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred --HHHHHHHHh-----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 011111110 0011112224568999999999999999999 66654
No 361
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-37 Score=311.23 Aligned_cols=293 Identities=20% Similarity=0.260 Sum_probs=221.1
Q ss_pred CHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeee
Q 013238 113 SLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCM 189 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 189 (447)
.+.++....++|+++++||+|+||.|..++.+ +++.||.|++.+... ......|..|-++|...+.+-|+.+...|+
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 35667778899999999999999999999986 588999999976322 233446888899999999999999999999
Q ss_pred cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEee
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 269 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 269 (447)
+..++|+|||||+||+|-.++.... ++++..++.++..|+-||.-||+. |+|||||||+|||||..|++||+|
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeecc
Confidence 9999999999999999999997764 489999999999999999999999 999999999999999999999999
Q ss_pred cCCccccCCCCCceeeccccccCcccccccc----C-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHH
Q 013238 270 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS----T-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 344 (447)
Q Consensus 270 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 344 (447)
||.+-.+.....-.....+|||.|++||++. + +.|+..+|+||+||++|||+.|..||.... +++-.
T Consensus 219 FGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads--------lveTY 290 (1317)
T KOG0612|consen 219 FGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS--------LVETY 290 (1317)
T ss_pred chhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH--------HHHHH
Confidence 9999887765555566678999999999984 3 578999999999999999999999996422 22222
Q ss_pred HHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHHhcCCCchhhHHHHHhhhhhccCC
Q 013238 345 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK---MSEVVRMLEGDGLAERWEEWQKEEMFRQDFN 421 (447)
Q Consensus 345 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~ 421 (447)
...+..+....+-+ ..+......+||.+.+. +|..|.. +.++-. +.|=+...|..=.+-.....+
T Consensus 291 ~KIm~hk~~l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~----HpFF~g~~W~~iR~~~pP~vP 358 (1317)
T KOG0612|consen 291 GKIMNHKESLSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN----HPFFEGIDWDNIRESVPPVVP 358 (1317)
T ss_pred HHHhchhhhcCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh----CccccCCChhhhhhcCCCCCC
Confidence 22222221111111 11233445556555443 7888887 555443 333222222222334455555
Q ss_pred CCCCCCCcccc
Q 013238 422 HTPHPNNTWIV 432 (447)
Q Consensus 422 ~~~~~~~~~~~ 432 (447)
++..+.-|.+|
T Consensus 359 evssd~DTsnF 369 (1317)
T KOG0612|consen 359 EVSSDDDTSNF 369 (1317)
T ss_pred cCCCCCccccc
Confidence 56666666655
No 362
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.2e-35 Score=287.49 Aligned_cols=263 Identities=22% Similarity=0.323 Sum_probs=194.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecC-----Cc
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TE 193 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 193 (447)
.++|...+.||+|+||+||++... +++.||||.+.... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 357888899999999999999865 68999999986532 222234567899999999999999999987643 34
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
.++++||+. ++|.+++... ..+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS----QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999995 6888887643 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhh---
Q 013238 274 KLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK--- 349 (447)
Q Consensus 274 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 349 (447)
....... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ............
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~ 229 (337)
T cd07858 156 RTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-----VHQLKLITELLGSPS 229 (337)
T ss_pred cccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-----HHHHHHHHHHhCCCC
Confidence 8654322 22223347889999998865 4688999999999999999999999953210 000000000000
Q ss_pred --------cccccccccc---ccCC---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 350 --------EKKLEQLVDS---DMEG---NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 350 --------~~~~~~~~d~---~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.......... .... .........+.+++.+||+.+|.+|||+.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 230 EEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000000 0000 0011234668899999999999999999999876
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.4e-35 Score=284.41 Aligned_cols=268 Identities=21% Similarity=0.248 Sum_probs=196.4
Q ss_pred CHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeec
Q 013238 113 SLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT 190 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 190 (447)
...++....++|...+.||+|+||.||++... +++.||+|++..... ......+.+|++++..++|+||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 44556677899999999999999999999864 688999999875322 2223457789999999999999999998754
Q ss_pred C------CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc
Q 013238 191 P------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 264 (447)
Q Consensus 191 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~ 264 (447)
. ...+++++++ +++|.+++... .+++..++.++.|+++||+|||+. +++||||||+||++++++.
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 3 3357788876 78888877542 388999999999999999999999 9999999999999999999
Q ss_pred EEEeecCCccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHH
Q 013238 265 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 343 (447)
Q Consensus 265 ~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 343 (447)
+||+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... ....+...
T Consensus 159 ~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~----~~~~~~~~ 230 (345)
T cd07877 159 LKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD----HIDQLKLI 230 (345)
T ss_pred EEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH
Confidence 999999998754321 223357889999998866 567889999999999999999999994311 00001100
Q ss_pred HHHH----------hhccccccc---cccccCC---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 344 VKGL----------LKEKKLEQL---VDSDMEG---NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 344 ~~~~----------~~~~~~~~~---~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.... +........ +...... .........+.+++.+|++.||.+|||+.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 000000000 0000000 0000123457899999999999999999988865
No 364
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.9e-35 Score=276.54 Aligned_cols=260 Identities=26% Similarity=0.347 Sum_probs=196.5
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
|+..+.||+|.+|.||+|+.. +++.+|+|.+..... ......+..|+++++.++|+|++++++++.+....+++|||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456678999999999999976 489999999976532 223346778999999999999999999999989999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 281 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 281 (447)
. ++|.+++.... ..+++..++.++.+++.||+|||++ +++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 7 58999997653 2489999999999999999999999 999999999999999999999999999986543322
Q ss_pred ceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc--------
Q 013238 282 HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK-------- 352 (447)
Q Consensus 282 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 352 (447)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||.... ................
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS-----EIDQLFKIFQILGTPTEESWPGVT 227 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHHHhCCCcHHHHHhhc
Confidence 12223357789999998776 78999999999999999999999985321 1111111111100000
Q ss_pred ----ccccccccc---CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 353 ----LEQLVDSDM---EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 353 ----~~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
......... ...........+.+++.+||+.+|.+||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 228 KLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000 00001112467999999999999999999999875
No 365
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.4e-35 Score=283.46 Aligned_cols=262 Identities=24% Similarity=0.310 Sum_probs=192.9
Q ss_pred hCCCC-CCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-------------hHHHHHHHHHHHHhcCCCceeeEee
Q 013238 122 DNFSN-RNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-------------GELQFQTEVEMISMAVHRNLLRLRG 186 (447)
Q Consensus 122 ~~~~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------------~~~~~~~e~~~l~~l~h~niv~l~~ 186 (447)
++|.. .+.||+|+||+||+|... +++.||||.+....... ....+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45553 467999999999999876 68999999986432221 0124678999999999999999999
Q ss_pred eeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 187 FCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 187 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
++...+..+++|||+. |+|.+++.... .+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI----RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999996 68988886532 388999999999999999999999 999999999999999999999
Q ss_pred EeecCCccccCCCC-------------CceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccc
Q 013238 267 VGDFGLAKLMDYKD-------------THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARL 332 (447)
Q Consensus 267 l~Dfgl~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~ 332 (447)
|+|||++....... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~- 238 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN- 238 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-
Confidence 99999987654111 1111223367889999998764 46899999999999999999999995321
Q ss_pred cCCCcccHHHHHHHHhhccccc---ccc--------ccccCC---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 333 ANDDDVMLLDWVKGLLKEKKLE---QLV--------DSDMEG---NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~---~~~--------d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.......+.......... +.. ...... .........+.+++.+||+.+|.+|||+.+++.
T Consensus 239 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 239 ----EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred ----HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111111111111100000 000 000000 001123456889999999999999999999986
No 366
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.7e-35 Score=282.07 Aligned_cols=258 Identities=21% Similarity=0.305 Sum_probs=189.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC------
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ 192 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 192 (447)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+++++.++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468888999999999999999875 689999999865322 222345788999999999999999999886542
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..++++||+. .+|..++. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 94 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEecccc-cCHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 4589999985 36655542 1388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHh---
Q 013238 273 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL--- 348 (447)
Q Consensus 273 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 348 (447)
++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...........
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~ 234 (342)
T cd07879 164 ARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQILKVTGVP 234 (342)
T ss_pred CcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCC
Confidence 8754321 122346788999999876 4688999999999999999999999963211 00000000000
Q ss_pred --------hccccccccc--cccCCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 349 --------KEKKLEQLVD--SDMEGNY----IEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 349 --------~~~~~~~~~d--~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.......... +...... .......+.+++.+||+.||.+|||+.+++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred CHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000 0000000 01123457899999999999999999999863
No 367
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-34 Score=281.36 Aligned_cols=263 Identities=22% Similarity=0.308 Sum_probs=193.0
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT----- 192 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 192 (447)
..++|...+.||+|++|.||++... ++..||||++..... ......+.+|+++++.++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999865 689999999864322 222345778999999999999999999887543
Q ss_pred -cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 193 -ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 193 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
..++||+|+ +++|..++... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKHE-----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 348999999 77888887532 389999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCC-------CcccHHHH
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-------DDVMLLDW 343 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~-------~~~~~~~~ 343 (447)
++...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||........ .......+
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 164 LARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred cccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99764322 122346889999999876 4588999999999999999999999953210000 00000001
Q ss_pred HHHHhhccccccccc--cccCC----CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 344 VKGLLKEKKLEQLVD--SDMEG----NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 344 ~~~~~~~~~~~~~~d--~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
....... ....... +.... .........+.+++.+|++.||.+|||+.+++.
T Consensus 240 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 240 VQKLQSE-DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHhhcch-hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 0000000 00000 001123345889999999999999999999885
No 368
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-37 Score=287.14 Aligned_cols=298 Identities=22% Similarity=0.289 Sum_probs=220.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCc-EEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
.++..+..||-|+||.|-++...... .+|+|++++...- ........|-.+|...+.+.||+++-.+.+....|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45566677999999999999876433 4899988765432 22345677889999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
|-|-||.|+..|+.++. ++..+.+.++..+++|+.|||++ +||+|||||+|+++|.+|.+||.|||+|+.+..
T Consensus 500 EaClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred HhhcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999988764 88889999999999999999999 999999999999999999999999999998754
Q ss_pred CCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 358 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 358 (447)
. ..+-..+||+.|.|||++.+..++.++|.||||+++|||++|++||...+.. ...+. .++.
T Consensus 573 g--~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-----ktYn~---ILkG-------- 634 (732)
T KOG0614|consen 573 G--RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-----KTYNL---ILKG-------- 634 (732)
T ss_pred C--CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-----HHHHH---HHhh--------
Confidence 3 3345578999999999999999999999999999999999999999753321 11111 1111
Q ss_pred cccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH-HHHHHHHhcCCCch--hhHHHHHhhhhhccCCCCCCCCCcccccCC
Q 013238 359 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM-SEVVRMLEGDGLAE--RWEEWQKEEMFRQDFNHTPHPNNTWIVDST 435 (447)
Q Consensus 359 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-~evl~~L~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (447)
.-...++........++|.+.+..+|.+|... ..=+.-++++.+=+ +|.-...-.....-.+.+.+|--+..+|.+
T Consensus 635 -id~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~ 713 (732)
T KOG0614|consen 635 -IDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNF 713 (732)
T ss_pred -hhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccCC
Confidence 11112233344556778888889999999761 11122222222211 222233344444455555555555566555
Q ss_pred ----CcccCCccCC
Q 013238 436 ----SHIQPDELSG 445 (447)
Q Consensus 436 ----~~~~~~~~~~ 445 (447)
.-+-|+|+||
T Consensus 714 p~dnd~pppde~SG 727 (732)
T KOG0614|consen 714 PPDNDEPPPDELSG 727 (732)
T ss_pred CcccCCCCchhccc
Confidence 2334589998
No 369
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=260.58 Aligned_cols=253 Identities=24% Similarity=0.273 Sum_probs=194.1
Q ss_pred hhCCCCC-CeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecC----Cc
Q 013238 121 TDNFSNR-NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTP----TE 193 (447)
Q Consensus 121 ~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~ 193 (447)
+++|.+. ++||-|-.|.|..+..+ +++.+|+|++.... ...+|++.-.+. .|+|||.+++++.+. .-
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP------KARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH------HHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 3445443 57999999999999876 68999999986432 245777776555 499999999988653 34
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC---CCcEEEeec
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDF 270 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 270 (447)
+.+|||.|+||.|...++.++.. ++++.++.+|+.||+.|+.|||+. +|.||||||+|+|... +..+||+||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~--afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQ--AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 57999999999999999887643 599999999999999999999999 9999999999999964 456999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
|+|+.... .......+-|+.|.|||++...+|+...|+||+||++|-|++|.+||.. ......... ++.....
T Consensus 209 GFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS----~hg~aispg-Mk~rI~~ 281 (400)
T KOG0604|consen 209 GFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS----NHGLAISPG-MKRRIRT 281 (400)
T ss_pred ccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc----cCCccCChh-HHhHhhc
Confidence 99986432 2233445679999999999999999999999999999999999999952 111111000 0110000
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 351 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 351 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
-.-.+.........+...++|..+|..+|.+|.|+.+++..
T Consensus 282 ------gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 282 ------GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ------cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 01112233455667778889999999999999999999863
No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.5e-35 Score=284.86 Aligned_cols=261 Identities=21% Similarity=0.308 Sum_probs=188.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecC---------
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--------- 191 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------- 191 (447)
.+|...+.||.|+||.||+|... +|..||+|.+..... .....+.+|+++++.++|+||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 57888999999999999999875 588999999865433 3344678899999999999999998766543
Q ss_pred -----CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC-CCCcE
Q 013238 192 -----TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-EEFEA 265 (447)
Q Consensus 192 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~-~~~~~ 265 (447)
...+++|||+. ++|.+++... .+++..++.++.||+.||.|||+. +++||||||+||+++ +++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceE
Confidence 34689999996 5888877532 388999999999999999999999 999999999999997 45678
Q ss_pred EEeecCCccccCCCCCc--eeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHH
Q 013238 266 VVGDFGLAKLMDYKDTH--VTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 342 (447)
Q Consensus 266 kl~Dfgl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 342 (447)
+|+|||++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... .....
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~----~~~~~ 230 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL----EQMQL 230 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH
Confidence 99999999765322111 1122346888999998754 56788999999999999999999999532110 00000
Q ss_pred HHHHHh--hcccccc--------ccccccCCCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 343 WVKGLL--KEKKLEQ--------LVDSDMEGNY-----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 343 ~~~~~~--~~~~~~~--------~~d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...... ....... .......... .......+.+++.+||+.||.+|||+.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000 0000000 0000000000 0123356889999999999999999999985
No 371
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-34 Score=268.33 Aligned_cols=237 Identities=29% Similarity=0.331 Sum_probs=191.0
Q ss_pred eeecCCeEEEEEEEC-CCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcc
Q 013238 130 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 130 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
||+|++|.||++... +++.+|+|.+...... .....+..|+++++.++|+|++++++.+......+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999976 5889999998764332 2344688899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeec
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 286 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 286 (447)
.+++.... .+++..+..++.|+++||.|||+. +++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 81 FSHLSKEG----RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 99997643 389999999999999999999998 99999999999999999999999999987654322 12233
Q ss_pred cccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 287 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 287 ~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
..++..|+|||...+...+.++|+||||+++|+|++|..||..... ......... .. ...+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~---------~~--~~~~ 213 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILK---------DP--LRFP 213 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhc---------CC--CCCC
Confidence 4578899999999888889999999999999999999999953210 111111111 00 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHH
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPKMSE 393 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt~~e 393 (447)
......+.+++.+||..||++|||+.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 122466889999999999999999954
No 372
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=6.1e-35 Score=283.25 Aligned_cols=259 Identities=23% Similarity=0.317 Sum_probs=193.2
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCc----
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE---- 193 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 193 (447)
..++|+..+.||+|++|.||+|... +++.||||++..... ......+.+|+.+++.++|+|++++.+++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567889999999999999999976 578999999865322 2223457789999999999999999987765544
Q ss_pred --ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecC
Q 013238 194 --RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 271 (447)
Q Consensus 194 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 271 (447)
.++|+||+ +++|.+++... ++++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 78999998 67998888642 489999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 272 LAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 272 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
++...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+......
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-----~~~~~~i~~~~~~ 234 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-----IDQLKRIMNLVGT 234 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHhcCC
Confidence 99865322 222347888999998865 3678999999999999999999999953110 0001100000000
Q ss_pred -----------ccccccccc---ccCCCC---cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 351 -----------KKLEQLVDS---DMEGNY---IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 351 -----------~~~~~~~d~---~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
......... ...... .......+.+++.+||+.+|.+|||+.+|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000000 000000 0112467899999999999999999999876
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.6e-34 Score=276.66 Aligned_cols=285 Identities=19% Similarity=0.250 Sum_probs=199.8
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-C--CcEEEEEEecccccc-chHHHHHHHHHHHHhc-CCCceeeEeeeeecC----Cc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-D--GSLVAVKRLKEERTQ-GGELQFQTEVEMISMA-VHRNLLRLRGFCMTP----TE 193 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~ 193 (447)
+|+..+.||+|+||.||++... . +..||+|.+...... .....+.+|++++.++ .|+||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677789999999999999975 3 678999998653222 2234577899999988 599999999875432 44
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
.+++++|+. ++|..++... ..+++..++.++.||+.||.|||+. +++||||||+|||+++++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG----QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 678889885 6888888543 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc---eeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHH-------
Q 013238 274 KLMDYKDTH---VTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD------- 342 (447)
Q Consensus 274 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~------- 342 (447)
+........ ......|+..|+|||++.+ ..++.++||||||+++|+|++|+.||..... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~ 227 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY-----VDQLNQILQVLG 227 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH-----HHHHHHHHHHhC
Confidence 765422111 1122358889999998765 4689999999999999999999999853210 00000
Q ss_pred -----HHHHHhhcccccccc---ccccCC---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCchhhHHHH
Q 013238 343 -----WVKGLLKEKKLEQLV---DSDMEG---NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQ 411 (447)
Q Consensus 343 -----~~~~~~~~~~~~~~~---d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~ 411 (447)
++...... ...... ...... .........+.+++.+||+.||.+|||+.+++.. +|
T Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~-----------~~- 294 (332)
T cd07857 228 TPDEETLSRIGSP-KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH-----------PY- 294 (332)
T ss_pred CCCHHHHHhhhhh-hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC-----------hh-
Confidence 00000000 000000 000000 0001123568899999999999999999998632 22
Q ss_pred HhhhhhccCCCCCCCCCcccccCC
Q 013238 412 KEEMFRQDFNHTPHPNNTWIVDST 435 (447)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~ 435 (447)
+..+++ ....+.|+.+|.++-+
T Consensus 295 -~~~~~~-~~~~~~~~~~~~~~~~ 316 (332)
T cd07857 295 -LAIWHD-PDDEPVCQKPFDFSFE 316 (332)
T ss_pred -hhhhcC-ccccccccccccCCcc
Confidence 122333 4446667777766543
No 374
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.6e-35 Score=262.93 Aligned_cols=205 Identities=26% Similarity=0.375 Sum_probs=169.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-----CcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeec-CCc
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLTD-----GSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMT-PTE 193 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 193 (447)
...|+....||+|.+|.||+|.-.+ ...+|||+++..... .......+|+.+++.++|+|++.+..++.+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 4568889999999999999996432 236899999866432 223457789999999999999999998887 677
Q ss_pred ceEEEecccCCcchhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC----CcEEEe
Q 013238 194 RLLVYPFMVNGSVASCLRERGQS-QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE----FEAVVG 268 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~----~~~kl~ 268 (447)
.++++||.+. +|+..++-.+.. ...++...++.|+.||+.|+.|||++ =|+||||||.||||..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 8999999977 888888654322 24588999999999999999999999 79999999999999877 999999
Q ss_pred ecCCccccCCCCCc--eeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 269 DFGLAKLMDYKDTH--VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 269 Dfgl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
|+|+++.+...-.. ....++-|.+|.|||.+.+. .|+.+.||||.|||+.||+|-.+.|..
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 99999987543221 23345679999999998876 579999999999999999998888753
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.2e-34 Score=263.56 Aligned_cols=219 Identities=21% Similarity=0.177 Sum_probs=174.4
Q ss_pred cCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcchhhhh
Q 013238 133 GGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR 211 (447)
Q Consensus 133 G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 211 (447)
|.+|.||++... +++.+|+|.+.... .+..|...+....|||++++++++......+++|||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 899999999975 68899999996543 12344455556679999999999999999999999999999999986
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeecccccc
Q 013238 212 ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 291 (447)
Q Consensus 212 ~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~ 291 (447)
... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++|||.+...... .....++.
T Consensus 78 ~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~ 146 (237)
T cd05576 78 KFL----NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVEN 146 (237)
T ss_pred Hhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCc
Confidence 543 389999999999999999999999 9999999999999999999999999987654322 12233567
Q ss_pred CccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHH
Q 013238 292 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVE 371 (447)
Q Consensus 292 ~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 371 (447)
.|+|||.+.+..++.++||||+|+++|||++|+.|+...... .... .. ...+.....
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------------~~~~-----~~----~~~~~~~~~ 203 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--------------INTH-----TT----LNIPEWVSE 203 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------------cccc-----cc----cCCcccCCH
Confidence 899999998888899999999999999999999887421100 0000 00 011112345
Q ss_pred HHHHHHHHccCCCCCCCCCH
Q 013238 372 QLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 372 ~l~~li~~cl~~dP~~RPt~ 391 (447)
.+.+++.+|++.||.+|||+
T Consensus 204 ~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHHHccCCHHHhcCC
Confidence 68889999999999999997
No 376
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-35 Score=244.12 Aligned_cols=213 Identities=23% Similarity=0.367 Sum_probs=178.2
Q ss_pred cCHHHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHh-cCCCceeeEeeeee
Q 013238 112 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRNLLRLRGFCM 189 (447)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~ 189 (447)
+....+++..++...+..||+|++|.|-+-++. +|...|+|++..........++++|+++..+ ...|.+|.++|...
T Consensus 36 I~~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~ 115 (282)
T KOG0984|consen 36 IGDRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF 115 (282)
T ss_pred EecCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh
Confidence 344446677777778888999999999888764 7999999999877666666678888887654 46999999999999
Q ss_pred cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEee
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 269 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 269 (447)
.....++.||.| .-+|..+-...-.....+++..+-+|+..++.||.|||++. .++|||+||+||||+.+|++|+||
T Consensus 116 regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCD 192 (282)
T KOG0984|consen 116 REGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICD 192 (282)
T ss_pred ccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcc
Confidence 999999999999 55888776665445556999999999999999999999987 899999999999999999999999
Q ss_pred cCCccccCCCCCceeeccccccCccccccccC----CCCCchhhhHHHHHHHHHHHhCCCCccc
Q 013238 270 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAFDL 329 (447)
Q Consensus 270 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlG~il~elltg~~p~~~ 329 (447)
||++..+..+.. .+...|...|||||.+.. ..|+.++||||||+.+.||.+++.||+.
T Consensus 193 FGIsG~L~dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 193 FGISGYLVDSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred cccceeehhhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 999987643322 222458889999998853 3689999999999999999999999963
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.2e-33 Score=295.27 Aligned_cols=146 Identities=32% Similarity=0.455 Sum_probs=129.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++|.+.+.||+|+||.||+|.+. +++.||||+++.... ......+..|+.++..++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888899999999999999986 688999999975432 222346888999999999999999999999889999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
||+.+++|.+++.... .+++..++.++.||+.||.|||++ +|+||||||+||||+.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999987543 378899999999999999999999 99999999999999999999999999875
No 378
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-34 Score=233.87 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=193.7
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+|...++||+|.+|+|++|+.. +++.||+|+++.+... .......+|+-+++.+.|.|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3455678999999999999865 5889999999765433 3344678999999999999999999999999999999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
| ..+|..+.....+ .++....+.++.|+++||.|+|++ ++.|||+||.|.||+.+|++|++|||+++.++...
T Consensus 83 c-dqdlkkyfdslng---~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLNG---DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred h-hHHHHHHHHhcCC---cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 9 4588888766443 388899999999999999999999 99999999999999999999999999999876432
Q ss_pred CceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccc----
Q 013238 281 THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE---- 354 (447)
Q Consensus 281 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 354 (447)
......+.|.+|.+|.++.+. -|++..|+||.|||+.|+.. |++.|.. .+....+. .+...+......
T Consensus 156 -rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg----~dvddqlk-rif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG----NDVDDQLK-RIFRLLGTPTEDQWPS 229 (292)
T ss_pred -EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC----CcHHHHHH-HHHHHhCCCccccCCc
Confidence 334455679999999999876 47899999999999999987 5555532 11111111 111111111111
Q ss_pred --cccccccCCCCc---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 355 --QLVDSDMEGNYI---------EEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 355 --~~~d~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.+-|......++ +.....-.+++...+.-+|.+|.++++.++
T Consensus 230 ~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 230 MTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred cccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 111111111111 111223356777778889999999988765
No 379
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-35 Score=268.29 Aligned_cols=299 Identities=23% Similarity=0.318 Sum_probs=211.5
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchH--HHHHHHHHHHHhc-CCCceeeEeeeeecCCcc
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGE--LQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~--~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 194 (447)
+-..+|..+.+||+|+||+|.+|.-+ +.+.+|||+++++...... .--+.|-++|... +-|.++++...++.-+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 33457888999999999999999865 4788999999876543221 1223456666655 467888898888999999
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
|+||||+.||+|--.+++.+. +.+..+..++..||-||-+||++ +|++||||.+|||+|.+|++||+|||+++
T Consensus 426 yFVMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred eeEEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccc
Confidence 999999999999999988765 66677888999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.-- -....+...+||+.|+|||++.-.+|+..+|+|||||+||||+.|+.||+..+ +..+. .
T Consensus 499 Eni-~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD-----E~elF------------~ 560 (683)
T KOG0696|consen 499 ENI-FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDELF------------Q 560 (683)
T ss_pred ccc-cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC-----HHHHH------------H
Confidence 532 23344556789999999999999999999999999999999999999997421 11111 1
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHHHhcCCC--chhhHHHHHhhhhhccCCCCCCCCCccc
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMS-EVVRMLEGDGL--AERWEEWQKEEMFRQDFNHTPHPNNTWI 431 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl~~L~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (447)
.+.+.. -.++.....+...+....+.+.|.+|.... +--+-+....+ .-.|++....++...-.+...+.-..-+
T Consensus 561 aI~ehn--vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~eN 638 (683)
T KOG0696|consen 561 AIMEHN--VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAEN 638 (683)
T ss_pred HHHHcc--CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccccCCchhh
Confidence 111111 123333445566677778899999996431 11122222222 1233333333333333333323344455
Q ss_pred ccCCCcccCCccC
Q 013238 432 VDSTSHIQPDELS 444 (447)
Q Consensus 432 ~~~~~~~~~~~~~ 444 (447)
+|..+-.++-+|.
T Consensus 639 FD~~Ft~~~~~lT 651 (683)
T KOG0696|consen 639 FDKFFTREPTDLT 651 (683)
T ss_pred hhHHHhcCCCCCC
Confidence 5555555554443
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-34 Score=283.74 Aligned_cols=257 Identities=25% Similarity=0.362 Sum_probs=206.9
Q ss_pred HHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeee---
Q 013238 115 RELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM--- 189 (447)
Q Consensus 115 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~--- 189 (447)
+.+...++.|++.+.||.|.+|.||+++.. +++.+|+|++...... ..+.+.|.++++.. .|||++.++|++.
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~--deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE--EEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc--cHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 333445678999999999999999999854 6899999998765443 33566788888766 5999999999886
Q ss_pred --cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEE
Q 013238 190 --TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 267 (447)
Q Consensus 190 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl 267 (447)
.++++|||||||.+|+..++++... ...+.|..+..|+..++.|+.+||.+ .++|||||-.|||++.++.+||
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEE
Confidence 3578999999999999999998866 44599999999999999999999999 9999999999999999999999
Q ss_pred eecCCccccCCCCCceeeccccccCccccccccCC-----CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHH
Q 013238 268 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 342 (447)
Q Consensus 268 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 342 (447)
.|||.+..++...... ....||+.|||||++.-. .|+..+|+||||++..||.-|.+|+-..
T Consensus 165 vDFGvSaQldsT~grR-nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm------------ 231 (953)
T KOG0587|consen 165 VDFGVSAQLDSTVGRR-NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM------------ 231 (953)
T ss_pred eeeeeeeeeecccccc-cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc------------
Confidence 9999998876544433 334599999999998533 4677899999999999999999998421
Q ss_pred HHHHHhhccccccc-cccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 343 WVKGLLKEKKLEQL-VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 343 ~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.....+..+ -++...-..+..-.+.+.++|..||.+|-..||++.++++
T Consensus 232 -----HPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 232 -----HPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred -----chhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 111111111 1222223345667788999999999999999999998876
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=279.81 Aligned_cols=240 Identities=23% Similarity=0.287 Sum_probs=190.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHh-cCCCceeeEeeeeecCCcceEEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
++.|+....+|.|+|+.|-++... +++..++|++.+... .-.+|+.++.+ -.|+|++++.+.+.+..+.|+||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 567888888999999999999865 678899999976522 22356655444 46999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEE-CCCCcEEEeecCCccccC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL-DEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfgl~~~~~ 277 (447)
|.+.++-|.+.+.... .....+..|+.+|+.|+.|||++ |++||||||+|||+ ++.++++|+|||.++...
T Consensus 396 e~l~g~ell~ri~~~~-----~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKP-----EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred hhccccHHHHHHHhcc-----hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 9999998877775433 22367778999999999999999 99999999999999 699999999999998765
Q ss_pred CCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccccc
Q 013238 278 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 357 (447)
Q Consensus 278 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (447)
.. ....+-|..|.|||++....++.++||||||++||+|++|+.||... ..+ . ++.
T Consensus 468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~----P~~---~-------------ei~ 523 (612)
T KOG0603|consen 468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAH----PAG---I-------------EIH 523 (612)
T ss_pred hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccC----Cch---H-------------HHH
Confidence 43 22224578899999999999999999999999999999999999631 111 1 111
Q ss_pred ccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 358 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 358 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.....+.+.........+|+.+||+.||.+||+|.++...
T Consensus 524 ~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 524 TRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1111222234445667889999999999999999998763
No 382
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=254.62 Aligned_cols=266 Identities=21% Similarity=0.283 Sum_probs=196.2
Q ss_pred CHHHHHHHhhCCCCCCeeeecCCeEEEEEE-ECCCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeec
Q 013238 113 SLRELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMT 190 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 190 (447)
.+.++...++ +.||+|+++.|.-++ ..+|..+|||++.+. ....+.+..+|++++...+ |+||+.+++++.+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3455555554 679999999999887 567999999999776 3344557889999998886 9999999999999
Q ss_pred CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc---EEE
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVV 267 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~---~kl 267 (447)
+...|+|||-|.||.|...++++.. +++.++.++..+|+.||.|||.+ ||.||||||+|||..+... +||
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~~----F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRKH----FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhhh----ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 9999999999999999999987653 89999999999999999999999 9999999999999976544 899
Q ss_pred eecCCccccCCCC------CceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCC
Q 013238 268 GDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 336 (447)
Q Consensus 268 ~Dfgl~~~~~~~~------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~ 336 (447)
+||.+........ .-.....+|+..|||||+.. ...|+.+.|.||||+|||-|++|..||......+..
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 9999875432211 11122345888999999763 335789999999999999999999999643222111
Q ss_pred ---cccHHHHHHHHhhccccccccccc--cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 337 ---DVMLLDWVKGLLKEKKLEQLVDSD--MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 337 ---~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+......-..++. .+-+.. +...........-.+++...+..++.+|.++.++++
T Consensus 301 WdrGe~Cr~CQ~~LFe-----sIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFE-----SIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHH-----HHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 1111111111111 010110 111112223344566777788899999999988877
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=262.59 Aligned_cols=260 Identities=23% Similarity=0.282 Sum_probs=198.5
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC--CCc----eeeEeeeeecCC
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV--HRN----LLRLRGFCMTPT 192 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--h~n----iv~l~~~~~~~~ 192 (447)
.+.+|.+...+|+|.||.|-.+.+. .+..||||+++.-. .-....+-|++++.++. -|+ ++.+.+++.-.+
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~--kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD--KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH--HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 4778999999999999999999865 47899999997532 22334567899998884 222 677888888889
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC------------
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD------------ 260 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~------------ 260 (447)
+.++|+|.+ |-++.++|..+. ..+++...+..|+.|++++++|||+. +++|.||||+|||+.
T Consensus 165 hiCivfell-G~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred ceEEEEecc-ChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCC
Confidence 999999998 779999998754 34699999999999999999999999 999999999999993
Q ss_pred --------CCCcEEEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccc
Q 013238 261 --------EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 332 (447)
Q Consensus 261 --------~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~ 332 (447)
++..++++|||.|...... ...++.|..|.|||++.+..++..+||||+||||+|+.||...|+.
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt--- 311 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT--- 311 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc---
Confidence 1345899999999864322 2455689999999999999999999999999999999999999963
Q ss_pred cCCCcccHHHHHHHHhh-----------------ccccc-----------ccccccc----CCCCcHHHHHHHHHHHHHc
Q 013238 333 ANDDDVMLLDWVKGLLK-----------------EKKLE-----------QLVDSDM----EGNYIEEEVEQLIQVALLC 380 (447)
Q Consensus 333 ~~~~~~~~~~~~~~~~~-----------------~~~~~-----------~~~d~~~----~~~~~~~~~~~l~~li~~c 380 (447)
.++......++..+. ...+. .+.+... .....+.+...|++|+..|
T Consensus 312 --Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m 389 (415)
T KOG0671|consen 312 --HENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM 389 (415)
T ss_pred --CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence 122222222222111 11000 0000000 0112345667799999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 013238 381 TQGSPMERPKMSEVVR 396 (447)
Q Consensus 381 l~~dP~~RPt~~evl~ 396 (447)
|..||.+|+|+.|++.
T Consensus 390 L~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 390 LEFDPARRITLREALS 405 (415)
T ss_pred HccCccccccHHHHhc
Confidence 9999999999999886
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.9e-33 Score=283.80 Aligned_cols=264 Identities=19% Similarity=0.199 Sum_probs=170.4
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-C----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeee------e
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-D----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF------C 188 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~ 188 (447)
..++|...+.||+|+||.||+|.+. + +..||||++...... . .... +.+....+.++..+... +
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e-~~~~--e~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--E-IWMN--ERVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--H-HHHH--HHHHhhchhhHHHHHHhhhccccc
Confidence 4678999999999999999999976 4 689999988643211 1 1111 11122222222222111 2
Q ss_pred ecCCcceEEEecccCCcchhhhhhcCCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC
Q 013238 189 MTPTERLLVYPFMVNGSVASCLRERGQS----------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDV 252 (447)
Q Consensus 189 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dl 252 (447)
......++||||+.+++|.+++...... ........+..++.|++.||+|||++ +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 3456789999999999999988653210 00112345668999999999999999 9999999
Q ss_pred CCCCEEECC-CCcEEEeecCCccccCCCCCceeeccccccCccccccccCC----------------------CCCchhh
Q 013238 253 KAANILLDE-EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG----------------------KSSEKTD 309 (447)
Q Consensus 253 k~~Nill~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sD 309 (447)
||+|||+++ ++.+||+|||+++.+............+++.|+|||.+... .++.++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999986 57999999999986543333333445689999999965322 2345679
Q ss_pred hHHHHHHHHHHHhCCCCcccccc-----cCCCcccHHHHHHHHhhccccccccccccCC--CCcHHHHHHHHHHHHHccC
Q 013238 310 VFGYGVMLLELITGQRAFDLARL-----ANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG--NYIEEEVEQLIQVALLCTQ 382 (447)
Q Consensus 310 vwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~l~~li~~cl~ 382 (447)
||||||+||||+++..+++.... ..........|....... ....+.. ...........+++.+||+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHcc
Confidence 99999999999998776542100 000011122221111000 0000000 0001112235689999999
Q ss_pred CCCCCCCCHHHHHHH
Q 013238 383 GSPMERPKMSEVVRM 397 (447)
Q Consensus 383 ~dP~~RPt~~evl~~ 397 (447)
.||.+|||+.++++.
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999983
No 385
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=271.67 Aligned_cols=244 Identities=25% Similarity=0.334 Sum_probs=193.6
Q ss_pred CeeeecCCeEEEEEEEC-CCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCc
Q 013238 128 NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 205 (447)
++||+|.||+||-|+.+ +|+.||||++.+.+-. ..+.++.+|+.+|..+.||.||.+.-.|...+..++|||-+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 78999999999999975 7999999999876543 345578899999999999999999999999999999999995 45
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC---CcEEEeecCCccccCCCCCc
Q 013238 206 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 206 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgl~~~~~~~~~~ 282 (447)
..+++-.... ..+++...+.++.||+.||.|||.+ +|+|+||||+|||+.+. -.+||+|||+|+.+... .
T Consensus 649 MLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk--s 721 (888)
T KOG4236|consen 649 MLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK--S 721 (888)
T ss_pred HHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh--h
Confidence 5555433222 2389999999999999999999999 99999999999999643 47999999999987543 3
Q ss_pred eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 283 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
....++||+.|+|||++.++.|+..-|+||.|+|+|--++|..||... .++.+-++.. .+ ...
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-------EdIndQIQNA-------aF---MyP 784 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED-------EDINDQIQNA-------AF---MYP 784 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc-------cchhHHhhcc-------cc---ccC
Confidence 455678999999999999999999999999999999999999999531 1111111110 00 011
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.....+.....+++|...|+..-.+|-|.+.-+.
T Consensus 785 p~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 785 PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 2334445566788888888888889988766543
No 386
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-33 Score=267.08 Aligned_cols=202 Identities=24% Similarity=0.360 Sum_probs=171.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEE-CCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 197 (447)
..-|..++.||-|+||.|.++.- .+...+|.|.+.+... .......+.|-++|.....+-||+|+..|++.+.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 34577788999999999999974 3467899999975432 22334577889999999999999999999999999999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|+|++||++-.+|.+.+. +.+..++.++..+.+|+++.|.. |+|||||||+|||||.+|++||+||||+.-+.
T Consensus 708 MdYIPGGDmMSLLIrmgI----FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMGI----FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred EeccCCccHHHHHHHhcc----CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccce
Confidence 999999999999987654 88899999999999999999999 99999999999999999999999999985431
Q ss_pred CCCC-------------------------c----------------eeeccccccCccccccccCCCCCchhhhHHHHHH
Q 013238 278 YKDT-------------------------H----------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVM 316 (447)
Q Consensus 278 ~~~~-------------------------~----------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~i 316 (447)
.... . .....+||+.|+|||++....++..+|+||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 1000 0 0112459999999999999999999999999999
Q ss_pred HHHHHhCCCCccc
Q 013238 317 LLELITGQRAFDL 329 (447)
Q Consensus 317 l~elltg~~p~~~ 329 (447)
||||+.|+.||-.
T Consensus 861 l~em~~g~~pf~~ 873 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLA 873 (1034)
T ss_pred HHHHhhCCCCccC
Confidence 9999999999953
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-35 Score=253.78 Aligned_cols=263 Identities=24% Similarity=0.369 Sum_probs=192.6
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeec--------CC
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT--------PT 192 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~~ 192 (447)
.|+...+||+|.||.|++|+.+ +|+.||+|++-.+.. ..-.....+|+++|..+.|+|++.++++|.. ..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4566678999999999999876 478889887754322 2223456789999999999999999998863 23
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..|+||.+|+. +|..+|.+... .++..++.+++.++..||.|+|+. .|+|||+|+.|+||+.+|.+||+|||+
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~v---r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRKV---RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCccc---cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 46899999966 88888866533 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---eeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHh
Q 013238 273 AKLMDYKDTH---VTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 273 ~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
++.+...... ..+..+.|.+|.+||.+.+. .|+++.|||..|||+.||.||.+-+... .++.....+..+.
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgn-----teqqql~~Is~Lc 245 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGN-----TEQQQLHLISQLC 245 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCC-----hHHHHHHHHHHHh
Confidence 9876543321 23445569999999988765 6899999999999999999999887531 1122222222221
Q ss_pred hcc-----------ccccccc-cccCCCC---cHHH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 349 KEK-----------KLEQLVD-SDMEGNY---IEEE------VEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 349 ~~~-----------~~~~~~d-~~~~~~~---~~~~------~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
... .+.+.+. +.+.... ..+- ....++++..++..||.+|+++++++..
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 110 0011110 0011000 0111 1246788888999999999999998863
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=7.2e-33 Score=254.36 Aligned_cols=239 Identities=31% Similarity=0.410 Sum_probs=190.9
Q ss_pred CCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcchhhhhh
Q 013238 134 GFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE 212 (447)
Q Consensus 134 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 212 (447)
+||.||+|... +|+.+++|++...........+.+|++.+++++|+|++++.+++......++++||+.+++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 48999999997654433256788999999999999999999999988899999999999999999876
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeeccccccC
Q 013238 213 RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 292 (447)
Q Consensus 213 ~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~ 292 (447)
... +++..++.++.+++.++.|||+. +++|+||+|+||++++++.++|+|||.+....... ......++..
T Consensus 81 ~~~----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~ 151 (244)
T smart00220 81 RGR----LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE 151 (244)
T ss_pred ccC----CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence 432 78999999999999999999999 99999999999999999999999999998764332 2233457889
Q ss_pred ccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHH
Q 013238 293 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQ 372 (447)
Q Consensus 293 y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 372 (447)
|++||.+.+..++.++||||||+++++|++|..||... .. .......... ..... ..........
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~----~~---~~~~~~~~~~-~~~~~-------~~~~~~~~~~ 216 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD----DQ---LLELFKKIGK-PKPPF-------PPPEWKISPE 216 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC----Cc---HHHHHHHHhc-cCCCC-------ccccccCCHH
Confidence 99999998888899999999999999999999998531 01 1111111111 00000 0000003456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 013238 373 LIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 373 l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
+.+++.+||..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 899999999999999999999986
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.1e-32 Score=272.54 Aligned_cols=264 Identities=22% Similarity=0.252 Sum_probs=180.1
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEE-----------------CCCcEEEEEEeccccccc-------------hHHHHHHH
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRL-----------------TDGSLVAVKRLKEERTQG-------------GELQFQTE 169 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~-------------~~~~~~~e 169 (447)
..++|++.++||+|+||+||+|.. .+++.||||++....... .......|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235689999986432211 01123346
Q ss_pred HHHHHhcCCCce-----eeEeeeeec--------CCcceEEEecccCCcchhhhhhcCC--------------------C
Q 013238 170 VEMISMAVHRNL-----LRLRGFCMT--------PTERLLVYPFMVNGSVASCLRERGQ--------------------S 216 (447)
Q Consensus 170 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~ 216 (447)
+.++.+++|.++ ++++++|.. ....++||||+.+++|.++++.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 677777776654 567777653 3567999999999999999875321 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeeccccccCcccc
Q 013238 217 QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 296 (447)
Q Consensus 217 ~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aP 296 (447)
...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788999999999999999999 999999999999999999999999999975433222111222347899999
Q ss_pred ccccCCCC----------------------CchhhhHHHHHHHHHHHhCCC-CcccccccCCC----cccHHHHHHHHhh
Q 013238 297 EYLSTGKS----------------------SEKTDVFGYGVMLLELITGQR-AFDLARLANDD----DVMLLDWVKGLLK 349 (447)
Q Consensus 297 E~~~~~~~----------------------~~~sDvwSlG~il~elltg~~-p~~~~~~~~~~----~~~~~~~~~~~~~ 349 (447)
|.+..... ..+.||||+||++++|++|.. ||......+.. ...+..|.. ..
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YK 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hc
Confidence 98754321 134699999999999999875 66422111100 011111110 00
Q ss_pred ccccccccccccCCCCcHHHHHHHHHHHHHccCCCC---CCCCCHHHHHH
Q 013238 350 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSP---MERPKMSEVVR 396 (447)
Q Consensus 350 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPt~~evl~ 396 (447)
. ................+++.+++..+| .+|+|+.|+++
T Consensus 458 ~--------~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 G--------QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred c--------cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0 011111122234567788888888765 68999999986
No 390
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=262.02 Aligned_cols=258 Identities=23% Similarity=0.331 Sum_probs=194.7
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc------hHHHHHHHHHHHHhcCCCceeeEeeeeec-C
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG------GELQFQTEVEMISMAVHRNLLRLRGFCMT-P 191 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~ 191 (447)
..++|-.+.+||+|+|+.||+|.+- ..+.||||+-....... -.+...+|..+-+.+.||.||++++++.- .
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3466777889999999999999854 57889999875332211 12346689999999999999999999864 5
Q ss_pred CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC---CCcEEEe
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVG 268 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 268 (447)
+..+-|+|||+|.+|.-+|++... +++.++..|+.||+.||.||.+. .++|+|-||||.|||+.+ .|.+||+
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhkl----mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKL----MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhh----hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence 678899999999999999987653 78999999999999999999986 668999999999999954 5789999
Q ss_pred ecCCccccCCCCCc------eeeccccccCccccccccCC----CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcc
Q 013238 269 DFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTG----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 338 (447)
Q Consensus 269 Dfgl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~ 338 (447)
|||+++.++..... .+....||.+|++||++.-+ ..+.|.||||.|||+|.++.|+.||... ....
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn----qsQQ 691 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN----QSQQ 691 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc----hhHH
Confidence 99999988754332 34455799999999988533 4688999999999999999999999631 1111
Q ss_pred cHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 013238 339 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVV 395 (447)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 395 (447)
..+....+....+..+. .-+........+|.+||++.-++|....++.
T Consensus 692 -------dILqeNTIlkAtEVqFP--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 692 -------DILQENTILKATEVQFP--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred -------HHHhhhchhcceeccCC--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 11111111111111111 1122334566789999999999998776664
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-33 Score=248.43 Aligned_cols=253 Identities=24% Similarity=0.331 Sum_probs=199.4
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccch--HHHHHHHHHHHHhc-CCCceeeEeeeeecCCcc
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGG--ELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 194 (447)
+..++|...++||+|+|.+|..+++. +.+.+|+|+++++-.... ..=.+.|-.+.... +||.+|-+..+++....+
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL 326 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence 44578999999999999999999876 578999999986543222 22245565555544 699999999999999999
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++|.||.+||+|--.+++.+ .++++.+..+...|.-||.|||++ ||++||||.+|+|+|..|++||+|+|+++
T Consensus 327 ffvieyv~ggdlmfhmqrqr----klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred EEEEEEecCcceeeehhhhh----cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhh
Confidence 99999999999988776543 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
.- ......+...+||+.|+|||++.+..|....|+|+||++++||+.|+.||+...+ +..+.+-.+++....-++.+.
T Consensus 400 e~-l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm-~n~d~ntedylfqvilekqir 477 (593)
T KOG0695|consen 400 EG-LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGM-DNPDMNTEDYLFQVILEKQIR 477 (593)
T ss_pred cC-CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecC-CCcccchhHHHHHHHhhhccc
Confidence 53 2344556678899999999999999999999999999999999999999987553 334444455544443332211
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCC
Q 013238 355 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK 390 (447)
Q Consensus 355 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 390 (447)
- +.........++..-|++||.+|..
T Consensus 478 i----------prslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 478 I----------PRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred c----------cceeehhhHHHHHHhhcCCcHHhcC
Confidence 1 1111223445667778999999853
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.98 E-value=4.8e-33 Score=275.89 Aligned_cols=246 Identities=27% Similarity=0.364 Sum_probs=183.8
Q ss_pred CCCCCeeeecCCeE-EEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeeeeecCCcceEEEecc
Q 013238 124 FSNRNILGRGGFGK-VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 124 ~~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
|...+++|.|+.|+ ||+|.+. |+.||||++-.+. .....+|+..+..- .|||||++++.-.++...|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 44556789998765 7999986 7899999985432 33567899988876 4999999999888889999999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC---C--CcEEEeecCCcccc
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---E--FEAVVGDFGLAKLM 276 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~---~--~~~kl~Dfgl~~~~ 276 (447)
..+|.++++..........-...+.++.|+++||++||+. +||||||||.||||+. + .+++|+|||+++.+
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 5699999987411111112145577889999999999998 9999999999999976 3 57899999999988
Q ss_pred CCCCCce--eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhC-CCCcccccccCCCcccHHHHHHHHhhcccc
Q 013238 277 DYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG-QRAFDLARLANDDDVMLLDWVKGLLKEKKL 353 (447)
Q Consensus 277 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (447)
....... .....||-+|+|||++....-+.++|||||||++|+.++| .+||...... ..+.+.. ...+
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R------~~NIl~~---~~~L 732 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER------QANILTG---NYTL 732 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh------hhhhhcC---ccce
Confidence 7554332 3345699999999999999889999999999999999985 9999531100 0000000 0000
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 354 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 354 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..+ ....++ ...+||.+|++.+|..||++.+|+.
T Consensus 733 ~~L-------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 733 VHL-------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eee-------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 000 001111 5778999999999999999999975
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-32 Score=241.05 Aligned_cols=264 Identities=23% Similarity=0.302 Sum_probs=197.1
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----cceE
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERLL 196 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 196 (447)
.+..+-||-|+||.||.+.+. +|+.||.|++..... -...+.+.+|++++..++|.|++..+++.+-.. +.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344577999999999999875 799999999864321 223456789999999999999999988866442 4577
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+.|.| ..+|...+- +..+++...++-++.||++||+|||+. +|.||||||.|.|++.+..+||+|||+++..
T Consensus 135 ~TELm-QSDLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHH-Hhhhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccccc
Confidence 88887 446666653 445688899999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCceeeccccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
...+...++..+-|..|.|||++.+. .|+.+.||||.|||+.|++..+-.|+... .....+.+..++.....+.
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~-----PiqQL~lItdLLGTPs~Ea 281 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG-----PIEQLQMIIDLLGTPSQEA 281 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC-----hHHHHHHHHHHhCCCcHHH
Confidence 77777777777789999999999876 58999999999999999999888885321 1122233333332222221
Q ss_pred c-----------cccccCC-C--------CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 356 L-----------VDSDMEG-N--------YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 356 ~-----------~d~~~~~-~--------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
+ +....+. . -.......-..+.+.++..||.+|.+..+.+..+..
T Consensus 282 Mr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 282 MKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred HHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 1 1111100 0 011222335567778889999999999988876544
No 394
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.7e-29 Score=226.44 Aligned_cols=212 Identities=35% Similarity=0.521 Sum_probs=183.0
Q ss_pred eeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcchh
Q 013238 130 LGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 208 (447)
Q Consensus 130 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 208 (447)
||+|.+|.||++...+ ++.+++|.+...........+.+|++.++.+.|++++++++++......++++|++.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 899999999765443234578899999999999999999999998889999999999999999
Q ss_pred hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC-CCcEEEeecCCccccCCCCCceeecc
Q 013238 209 CLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKLMDYKDTHVTTAV 287 (447)
Q Consensus 209 ~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~ 287 (447)
++.... ..+++..+..++.++++++.+||+. +++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~ 153 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTI 153 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcc
Confidence 987643 2488999999999999999999999 9999999999999999 89999999999986543321 12223
Q ss_pred ccccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCc
Q 013238 288 RGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYI 366 (447)
Q Consensus 288 ~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 366 (447)
.+...|++||.+... ..+.++|+|++|+++++|
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 467889999999877 788999999999999999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 013238 367 EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 398 (447)
Q Consensus 367 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 398 (447)
..+.+++..|++.+|.+||++.++++.+
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3488899999999999999999998753
No 395
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-30 Score=240.93 Aligned_cols=132 Identities=23% Similarity=0.358 Sum_probs=111.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-----C---CceeeEeeeeec-
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-----H---RNLLRLRGFCMT- 190 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~- 190 (447)
..+|...++||.|.|++||++.+. +.+.||+|+.+... .-....+.|+++|+.++ | .+||+|++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 478999999999999999999865 67899999997532 22335678999988764 3 359999998864
Q ss_pred ---CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEE
Q 013238 191 ---PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 259 (447)
Q Consensus 191 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill 259 (447)
..+.+||+|++ |.+|..++......+ ++...+++|+.||+.||.|||.+| +|+|.||||+|||+
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrG--lpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRG--LPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 45789999999 779999988765443 889999999999999999999999 99999999999999
No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-31 Score=230.44 Aligned_cols=254 Identities=19% Similarity=0.295 Sum_probs=189.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCceeeEeee-eecCCcceEEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGF-CMTPTERLLVY 198 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~ 198 (447)
+.|.+.+.+|+|.||.+-++.++ ..+.+++|.+..... ...+|.+|...--.+ .|.||+.-+++ ++..+..++++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t--t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT--TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh--hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 56888899999999999999986 577899999876533 345688888754333 59999988776 45567778999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC--CCCcEEEeecCCcccc
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLM 276 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgl~~~~ 276 (447)
||++.|+|.+.+...+ +.+...+.++.|+++|+.|||++ ++||||||.+||||- +..++||||||+.+..
T Consensus 102 E~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred ccCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence 9999999999887654 78889999999999999999999 999999999999993 3458999999998754
Q ss_pred CCCCCceeeccccccCccccccccCC-----CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTG-----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 351 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (447)
+. ......-+..|.+||.+... ...+.+|||.||++++.++||+.||+.....+...+....|......
T Consensus 174 g~----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-- 247 (378)
T KOG1345|consen 174 GT----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-- 247 (378)
T ss_pred Cc----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc--
Confidence 32 12222345679999977543 24678999999999999999999998665555555555555443221
Q ss_pred ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 352 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 352 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.+. .......+.+.++-.+-+..++++|=-..++.++...
T Consensus 248 --------~~P-~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 248 --------ALP-KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred --------cCc-hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 111 1112234456777778889999999555555444443
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.4e-30 Score=222.38 Aligned_cols=256 Identities=21% Similarity=0.285 Sum_probs=189.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEE-CCCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCC--cceE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPT--ERLL 196 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~l 196 (447)
.++|++.+++|+|.++.|+.|.. .+.+.++||+++.-. .+.+.+|+.+|..+. ||||+.++++..++. ...+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 45788889999999999999984 468899999997643 346789999999998 999999999988754 4679
Q ss_pred EEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEeecCCccc
Q 013238 197 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLAKL 275 (447)
Q Consensus 197 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~~ 275 (447)
++||..+.+...+.. .++...+..++.+++.||.|+|+. ||+|||+||.|++||.. ..++|+|+|+|.+
T Consensus 113 iFE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred HhhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhh
Confidence 999998877666543 377788899999999999999999 99999999999999865 4699999999988
Q ss_pred cCCCCCceeeccccccCccccccccC-CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccc
Q 013238 276 MDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 354 (447)
Q Consensus 276 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (447)
..+.. .....+.+..|--||.+-. ..|+..-|+|||||+|..|+..+.||=.. .+....++..++ .+....+.
T Consensus 183 YHp~~--eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG---~dN~DQLVkIak-VLGt~el~ 256 (338)
T KOG0668|consen 183 YHPGK--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG---HDNYDQLVKIAK-VLGTDELY 256 (338)
T ss_pred cCCCc--eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC---CCCHHHHHHHHH-HhChHHHH
Confidence 65433 2333446778899998865 45788899999999999999999998321 111112222111 11111111
Q ss_pred cc-------cccccC----------------CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 355 QL-------VDSDME----------------GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 355 ~~-------~d~~~~----------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
.. +|+... .+...-...+.++++.+.|..|-++|+|++|.+.
T Consensus 257 ~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 257 AYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 10 111111 0001112355778888899999999999998764
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-30 Score=229.61 Aligned_cols=263 Identities=22% Similarity=0.247 Sum_probs=191.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecC------Cc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------TE 193 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 193 (447)
.+|.....+|.|.. .|..+.+. .++.||+|++.... .....++..+|+.++..++|+|+++++.++.-. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46667778999988 66666544 58899999986442 223345678899999999999999999988643 35
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
.|+|||+| ..+|...+... ++-.++..|+.|+++|++|||+. +|+||||||+||++..++.+||.|||++
T Consensus 96 ~y~v~e~m-~~nl~~vi~~e------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILME------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHHHHhh-hhHHHHHHHHh------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 68999999 56888887632 67788999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccc----------cCCCccc----
Q 013238 274 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL----------ANDDDVM---- 339 (447)
Q Consensus 274 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~----------~~~~~~~---- 339 (447)
+.-+.. ...+..+.|..|.|||++.+-.+.+.+||||+||++.||++|+..|.+... -...+..
T Consensus 166 r~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 166 RTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred cccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 864332 345666789999999999998899999999999999999999988843110 0000000
Q ss_pred HHHHHHHHhhcccccc-------ccccccCC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 340 LLDWVKGLLKEKKLEQ-------LVDSDMEG--NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 340 ~~~~~~~~~~~~~~~~-------~~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
+...++.++....-.+ +-|..... +...-......+++.+||-.||++|.+++++|+.
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 1111111111000000 00111110 1112234457789999999999999999999873
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-30 Score=245.20 Aligned_cols=196 Identities=23% Similarity=0.332 Sum_probs=166.9
Q ss_pred CCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc-------hHHHHHHHHHHHHhcC---CCceeeEeeeeecC
Q 013238 123 NFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-------GELQFQTEVEMISMAV---HRNLLRLRGFCMTP 191 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 191 (447)
+|+..+.+|.|+||.|++|.++ +...|+||.+.+++.-. .....-.|+.+|+.++ |+||+++++++.++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 5788899999999999999987 45678999987664211 1113556999999998 99999999999999
Q ss_pred CcceEEEecc-cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeec
Q 013238 192 TERLLVYPFM-VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 270 (447)
Q Consensus 192 ~~~~lv~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 270 (447)
+..|++||-. ++-+|.+++... +.+++.+.+.|+.||+.|+++||++ +|||||||-+||.++.+|-+||+||
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~k----p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFK----PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhcc----CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 9999999965 456888888654 3489999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCCCceeeccccccCccccccccCCCC-CchhhhHHHHHHHHHHHhCCCCcc
Q 013238 271 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFD 328 (447)
Q Consensus 271 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltg~~p~~ 328 (447)
|.+....... ....+||..|.|||++.+..| ...-|||++|++||.++....||.
T Consensus 715 gsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9987654332 334569999999999999887 667899999999999999988884
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=2e-28 Score=222.48 Aligned_cols=199 Identities=34% Similarity=0.515 Sum_probs=170.1
Q ss_pred CCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEeccc
Q 013238 124 FSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 202 (447)
|...+.||+|++|.||++...+ ++.+++|.+...........+.+|++.+.+++|+|++++++++......++++|++.
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566789999999999999875 889999999765433235578889999999999999999999998889999999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCc
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 282 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 282 (447)
+++|.+++...... +++..+..++.+++.++.+||+. +++|+||+++||+++.++.++|+|||++.........
T Consensus 81 ~~~L~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKKGGK---LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 99999998764321 78899999999999999999999 9999999999999999999999999999876543211
Q ss_pred eeeccccccCccccccc-cCCCCCchhhhHHHHHHHHHHHhCCCCcc
Q 013238 283 VTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFD 328 (447)
Q Consensus 283 ~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~il~elltg~~p~~ 328 (447)
......++..|++||.+ ....++.++|||+||++++||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 22233477889999998 66677889999999999999999999995
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=3e-30 Score=250.09 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=197.3
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
..++|+....+|+|.+|.||++++. +++..|+|.++.+.... ....+.|+-+++..+|+||+.++|.+...+..++.|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc-ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 3467888999999999999999976 68999999998765332 234678899999999999999999999999999999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
|||.+|+|++.-+..+ ++++.++..+....++||+|||+. +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 92 EycgggslQdiy~~Tg----plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EecCCCcccceeeecc----cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 9999999999876543 588999999999999999999999 889999999999999999999999999876543
Q ss_pred CCCceeeccccccCccccccc---cCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 279 KDTHVTTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 279 ~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
... ......||+.|||||+. ..+.|..++|||++|+...|+---..|.-. .....-+ .+. .+.
T Consensus 165 ti~-KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfd--------lhpmr~l-~Lm-TkS--- 230 (829)
T KOG0576|consen 165 TIA-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFD--------LHPMRAL-FLM-TKS--- 230 (829)
T ss_pred hhh-hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccc--------cchHHHH-HHh-hcc---
Confidence 322 23445699999999976 456789999999999999999876666310 0000000 000 000
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..++.-. .....-...+.++++.|+..+|++|||++.+++
T Consensus 231 ~~qpp~l-kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 231 GFQPPTL-KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCCcc-cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 0111100 011223455888999999999999999987766
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=1.1e-28 Score=232.91 Aligned_cols=202 Identities=22% Similarity=0.262 Sum_probs=166.7
Q ss_pred HHHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcC------CCceeeEeeeee
Q 013238 117 LQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV------HRNLLRLRGFCM 189 (447)
Q Consensus 117 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~ 189 (447)
-++...+|......|+|-|++|.+|.+. .|+.||||++...... .+.=+.|+++|++|+ --+.++++-.|.
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M--~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM--HKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH--hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 3566788999999999999999999976 4889999999754321 223357899999885 346788888888
Q ss_pred cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEe
Q 013238 190 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVG 268 (447)
Q Consensus 190 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~ 268 (447)
..+++|||+|-+ ..+|.++|...+. ...|....+..++.|+.-||..|... +|+|.||||+||||++. ..+|||
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLC 579 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLC 579 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeec
Confidence 889999999988 5699999988754 33588889999999999999999997 99999999999999876 468999
Q ss_pred ecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcc
Q 013238 269 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 328 (447)
Q Consensus 269 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~ 328 (447)
|||.|....... . +..-.+.-|.|||++.|.+|+...|+||.||+||||.||+-.|.
T Consensus 580 DfGSA~~~~ene--i-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp 636 (752)
T KOG0670|consen 580 DFGSASFASENE--I-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP 636 (752)
T ss_pred cCcccccccccc--c-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence 999997654322 1 12223557999999999999999999999999999999999884
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=2.9e-28 Score=260.69 Aligned_cols=195 Identities=14% Similarity=0.100 Sum_probs=136.3
Q ss_pred hcCC-CceeeEeeeee-------cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 013238 175 MAVH-RNLLRLRGFCM-------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 246 (447)
Q Consensus 175 ~l~h-~niv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ 246 (447)
.++| .||+++++++. .....++++|++ +++|.++|.... .++++..++.++.||++||+|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 3445 57777777762 223466778887 669999997532 3489999999999999999999999 9
Q ss_pred ceecCCCCCCEEECCCC-------------------cEEEeecCCccccCCCCC---------------ceeeccccccC
Q 013238 247 IIHRDVKAANILLDEEF-------------------EAVVGDFGLAKLMDYKDT---------------HVTTAVRGTIG 292 (447)
Q Consensus 247 ivH~dlk~~Nill~~~~-------------------~~kl~Dfgl~~~~~~~~~---------------~~~~~~~gt~~ 292 (447)
|+||||||+||||+..+ .+|++|||+++....... .......||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 99999999999996544 455666666543211000 00111347888
Q ss_pred ccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHH
Q 013238 293 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQ 372 (447)
Q Consensus 293 y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 372 (447)
|||||++.+..++.++|||||||+||||++|..|+.... .....+... ...+. .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~~~~~~~---------~~~~~-----~~~~~~~ 240 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTMSSLRHR---------VLPPQ-----ILLNWPK 240 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHHHHHHHh---------hcChh-----hhhcCHH
Confidence 999999999999999999999999999999988874210 000011000 01110 0111234
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 013238 373 LIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 373 l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
...++.+||+.+|.+|||+.++++
T Consensus 241 ~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 241 EASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHhCCCChhhCcChHHHhh
Confidence 567888999999999999999986
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=9e-27 Score=203.82 Aligned_cols=166 Identities=22% Similarity=0.279 Sum_probs=124.8
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|.+++...+ .++++..++.++.|++.||.|||++ + ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVRG---RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 68889887643 2499999999999999999999998 5 999999999999999 99988654322
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
..|++.|+|||++.+..++.++|||||||++|||+||+.||..... .......+....... +.. ..
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~---~~~~~~~~~~~~~~~-------~~~-~~ 129 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE---LSAILEILLNGMPAD-------DPR-DR 129 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch---hcHHHHHHHHHhccC-------Ccc-cc
Confidence 2488999999999999999999999999999999999999953211 011111111111100 000 00
Q ss_pred CCcHHHHH--HHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 364 NYIEEEVE--QLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 364 ~~~~~~~~--~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
........ .+.+++.+||+.+|.+|||+.++++.+..
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 11122222 58999999999999999999999998765
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=3.9e-27 Score=218.32 Aligned_cols=197 Identities=26% Similarity=0.398 Sum_probs=163.2
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC----CCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCc
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTE 193 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 193 (447)
...+.|...++||.|.|++||++.+. .++.||+|.+...... ..+..|+++|..+. +.||+++.+.+...+.
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 44567888999999999999999754 3678999999754433 35789999999886 9999999999999999
Q ss_pred ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEeecCC
Q 013238 194 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGL 272 (447)
Q Consensus 194 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl 272 (447)
..+|+||++.....++... ++...+..++..++.||+++|.+ |||||||||+|+|.+.. +.-.|.|||+
T Consensus 110 v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechh
Confidence 9999999999988888764 67888999999999999999999 99999999999999754 5678999999
Q ss_pred ccccCCC------------------C-------------------------CceeeccccccCccccccccCCC-CCchh
Q 013238 273 AKLMDYK------------------D-------------------------THVTTAVRGTIGHIAPEYLSTGK-SSEKT 308 (447)
Q Consensus 273 ~~~~~~~------------------~-------------------------~~~~~~~~gt~~y~aPE~~~~~~-~~~~s 308 (447)
+...+.. . ........||++|.|||++.... -+++.
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 8621100 0 00111235999999999987654 58899
Q ss_pred hhHHHHHHHHHHHhCCCCcc
Q 013238 309 DVFGYGVMLLELITGQRAFD 328 (447)
Q Consensus 309 DvwSlG~il~elltg~~p~~ 328 (447)
||||.|+|++-+++++.||-
T Consensus 260 Diws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred ceeeccceeehhhccccccc
Confidence 99999999999999999983
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-26 Score=202.32 Aligned_cols=248 Identities=21% Similarity=0.317 Sum_probs=187.6
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCc
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 205 (447)
..+|.+...|..|+|+++. ..+++|++.... .......|..|+-.++.+.||||++++|.|..+....++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 3458889999999999974 456677775432 22234478999999999999999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceee
Q 013238 206 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 285 (447)
Q Consensus 206 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 285 (447)
|..+|+.... -..+..+..+++.++++|++|||+.. +-|.---|.+..++||++.+++|+ .+-.++.... .
T Consensus 274 lynvlhe~t~--vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad~kfsfqe-----~ 344 (448)
T KOG0195|consen 274 LYNVLHEQTS--VVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQE-----V 344 (448)
T ss_pred HHHHHhcCcc--EEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-cccceeeeec-----c
Confidence 9999987543 34677888999999999999999973 334445789999999999988864 1111111001 1
Q ss_pred ccccccCccccccccCCCC---CchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccC
Q 013238 286 AVRGTIGHIAPEYLSTGKS---SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME 362 (447)
Q Consensus 286 ~~~gt~~y~aPE~~~~~~~---~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 362 (447)
...-.+.||+||.++..+. -.++|+|||++++||+.|...||........ -..+.-..++
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec-----------------gmkialeglr 407 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC-----------------GMKIALEGLR 407 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh-----------------hhhhhhcccc
Confidence 1123678999999987654 4578999999999999999999953221111 1112223344
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 013238 363 GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 401 (447)
Q Consensus 363 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 401 (447)
...++.....+.++|.-|++.||.+||.++.++-+||+.
T Consensus 408 v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 408 VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 445556667799999999999999999999999999874
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=7.1e-25 Score=209.82 Aligned_cols=167 Identities=22% Similarity=0.219 Sum_probs=129.3
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC--CCcEEEEEEecccc----ccchHHHHHHHHHHHHhcCCCceee-Eeeeeec
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT--DGSLVAVKRLKEER----TQGGELQFQTEVEMISMAVHRNLLR-LRGFCMT 190 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~ 190 (447)
....++|...+.||+|+||+||+|.+. +++.+|||++.... .......+.+|+++++.++|+|+++ ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345678999999999999999999865 57788999875331 1223446899999999999999985 4432
Q ss_pred CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC-CCCCEEECCCCcEEEee
Q 013238 191 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDV-KAANILLDEEFEAVVGD 269 (447)
Q Consensus 191 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dl-k~~Nill~~~~~~kl~D 269 (447)
+..++||||+++++|... .. .. ...++.++++||.|||++ +|+|||| ||+|||++.++.+||+|
T Consensus 91 -~~~~LVmE~~~G~~L~~~-~~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLA-RP-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred -CCcEEEEEccCCCCHHHh-Cc-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEE
Confidence 457999999999998632 11 11 146788999999999999 9999999 99999999999999999
Q ss_pred cCCccccCCCCCce-------eeccccccCccccccccCC
Q 013238 270 FGLAKLMDYKDTHV-------TTAVRGTIGHIAPEYLSTG 302 (447)
Q Consensus 270 fgl~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~ 302 (447)
||+++.+....... .....+++.|+|||.+...
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99998765432111 1234578899999998644
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.5e-23 Score=200.95 Aligned_cols=260 Identities=18% Similarity=0.211 Sum_probs=190.8
Q ss_pred CCCCCCeeeecCCeEEEEEEECCC--cEEEEEEeccccccchHHHHHHHHHHHHhcCC----CceeeEeeee-ecCCcce
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTDG--SLVAVKRLKEERTQGGELQFQTEVEMISMAVH----RNLLRLRGFC-MTPTERL 195 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~ 195 (447)
+|.+.+.||+|+||.||++..... ..+|+|........... .+..|..++..+.. .++..+++.. ......+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 788999999999999999997653 47888887665433332 56778888877763 5788888888 4677889
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-----CcEEEeec
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-----FEAVVGDF 270 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-----~~~kl~Df 270 (447)
+||+.+ |.+|.++..... ...++..+...|+.|++.+|.+||+. |++||||||.|+++... ..+.|.||
T Consensus 98 iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 999988 889999876554 34599999999999999999999999 99999999999999765 46899999
Q ss_pred CCcc--ccCCCCCc------e-eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHH
Q 013238 271 GLAK--LMDYKDTH------V-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 341 (447)
Q Consensus 271 gl~~--~~~~~~~~------~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 341 (447)
|+++ ........ . ....+||.+|+++.+..+...+.+.|+||++.++.|++.|..||........ .
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~ 246 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----K 246 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----H
Confidence 9998 32212211 1 1234599999999999999999999999999999999999999954221110 1
Q ss_pred HHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 013238 342 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 403 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 403 (447)
.-+....... .... ........+.++...+-..+..++|....+...|.+...
T Consensus 247 ~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 247 SKFEKDPRKL----LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred HHHHHHhhhh----cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 1111111110 1110 111122334455555556899999999999998766433
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=9e-22 Score=188.60 Aligned_cols=262 Identities=28% Similarity=0.372 Sum_probs=196.0
Q ss_pred CCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCC-ceeeEeeeeecCCcceEEEec
Q 013238 124 FSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVHR-NLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 200 (447)
|...+.||.|.||.||++... ..+++|.+....... ....+.+|...+..+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 556678999999999999987 788999997665544 356789999999999988 799999999766668999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCC-cEEEeecCCccccCCC
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKLMDYK 279 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~ 279 (447)
+.++++.+++...... ..+.......++.+++.++.|+|+. +++|||+||+||+++..+ .++++|||++......
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999776654321 2488899999999999999999999 999999999999999998 7999999999855433
Q ss_pred CCc-----eeeccccccCccccccccC---CCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcc
Q 013238 280 DTH-----VTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 351 (447)
Q Consensus 280 ~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (447)
... ......|+..|+|||.+.+ ...+...|+||+|++++++++|..||...... ..............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~ 231 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELP 231 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcC
Confidence 322 2345569999999999987 57889999999999999999999997532110 00111111111111
Q ss_pred ccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 352 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 352 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
. . .................+.+++..|+..+|..|.+..+....
T Consensus 232 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 T-P-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred C-c-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 0 000000000002223567888889999999999998877764
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=5e-24 Score=217.10 Aligned_cols=254 Identities=19% Similarity=0.241 Sum_probs=182.0
Q ss_pred CCCeeeecCCeEEEEEEEC-CCcEEEEEEeccc--cccc---hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 126 NRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEE--RTQG---GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 126 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
..+++|.|.+|.|+..... .....+.|.+... .... ....+..|+.+-..+.|+|++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4577999999977776543 2333444433211 1111 11125556666778899999888777766665555699
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
||++ +|..++.... .+....+..++.|++.|++|||+. |+.|||+|++|++++.+|.+||+|||.+..+...
T Consensus 402 ~~~~-Dlf~~~~~~~----~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG----KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhccc----ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 9999987652 277888899999999999999999 9999999999999999999999999999876544
Q ss_pred CC---ceeeccccccCccccccccCCCCCc-hhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhcccccc
Q 013238 280 DT---HVTTAVRGTIGHIAPEYLSTGKSSE-KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 355 (447)
Q Consensus 280 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (447)
.. ......+|+..|+|||++.+..|.+ ..||||.|+++..|++|+.||..+...+... .......+
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~----------~~~~~~~~ 543 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF----------KTNNYSDQ 543 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch----------hhhccccc
Confidence 33 3455567999999999999998865 6799999999999999999997543322110 00000000
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 356 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 356 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
.....-........+.....++.++|+.+|.+|-|+.+|++.
T Consensus 544 ~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 544 RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000000011223445567789999999999999999998763
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.4e-22 Score=179.97 Aligned_cols=200 Identities=19% Similarity=0.278 Sum_probs=167.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEE-ECCCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEE
Q 013238 121 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 198 (447)
.-+|.++++||+|.||..+.|+ +-+++.||||.-... ...-++..|....+.+. .+.|..++.+..+.-...||+
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 3478899999999999999998 447999999975432 22336778888888775 688998888888888899999
Q ss_pred ecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-----CcEEEeecCCc
Q 013238 199 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-----FEAVVGDFGLA 273 (447)
Q Consensus 199 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-----~~~kl~Dfgl~ 273 (447)
|.+ |-+|.+++.-.+. .++..++..++.|++.-++|+|++ .+|+|||||+|+||..- ..+.++|||+|
T Consensus 104 dLL-GPSLEDLFD~CgR---~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR---RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhh-CcCHHHHHHHhcC---cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 998 8899888766544 389999999999999999999999 99999999999999643 35899999999
Q ss_pred cccCCCCC------ceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccc
Q 013238 274 KLMDYKDT------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 330 (447)
Q Consensus 274 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~ 330 (447)
+....... .......||.+||+-....+..-+.+-|+=|||-++++.+-|..||+..
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 87643322 2234456999999999999999999999999999999999999999753
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.3e-22 Score=174.95 Aligned_cols=260 Identities=18% Similarity=0.221 Sum_probs=189.8
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEE-CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC-CceeeEeeeeecCCcceEE
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH-RNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv 197 (447)
..++|..+++||+|+||.+|.|.. .+|..||||.-..... .-++..|..+...+++ ..|..+..+..+.....+|
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 456799999999999999999984 5799999998654332 2256778888888875 5577778888888899999
Q ss_pred EecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC---CcEEEeecCCcc
Q 013238 198 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAK 274 (447)
Q Consensus 198 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgl~~ 274 (447)
|+.+ |-+|.+++.-... .++..+++.++-|++.-++|+|.+ +++||||||+|+|..-+ ..+.++|||+++
T Consensus 90 MdLL-GPsLEdLfnfC~R---~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSR---RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eecc-CccHHHHHHHHhh---hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 9998 8899888765433 388899999999999999999999 99999999999999643 458899999998
Q ss_pred ccCCCCCc------eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHh
Q 013238 275 LMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 348 (447)
Q Consensus 275 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 348 (447)
........ ......||.+|.+-....+..-+.+.|+=|+|.+|.++.-|..||+....... .+.... .
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-----~QKyEk-I 236 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-----KQKYEK-I 236 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-----HHHHHH-H
Confidence 65432221 22334589999998888888888999999999999999999999975322111 000001 1
Q ss_pred hccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 349 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 349 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.+.+....+.. + +...+.++.-.+..|-..--.+-|....+-+.+.-
T Consensus 237 ~EkK~s~~ie~-L----C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFri 283 (341)
T KOG1163|consen 237 SEKKMSTPIEV-L----CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRI 283 (341)
T ss_pred HHhhcCCCHHH-H----hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHH
Confidence 11111111111 1 12233456667777877778888887766655443
No 413
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.87 E-value=6.9e-22 Score=192.57 Aligned_cols=216 Identities=23% Similarity=0.379 Sum_probs=162.4
Q ss_pred HhcCCCceeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCc-eecCC
Q 013238 174 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI-IHRDV 252 (447)
Q Consensus 174 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~i-vH~dl 252 (447)
+.+.|.|+.+++|.+.+....+.|.+||..|+|.+.+..... .+++.....++.+|+.||+|||+. .| .|+.+
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~---~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI---KLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc---CccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 467899999999999999999999999999999999987433 389999999999999999999997 44 99999
Q ss_pred CCCCEEECCCCcEEEeecCCccccCC-CCCceeeccccccCccccccccCCC-------CCchhhhHHHHHHHHHHHhCC
Q 013238 253 KAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGK-------SSEKTDVFGYGVMLLELITGQ 324 (447)
Q Consensus 253 k~~Nill~~~~~~kl~Dfgl~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDvwSlG~il~elltg~ 324 (447)
+++|+++|....+||+|||+...... .............-|.|||.+.+.. .+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999876532 1111111122345699999987641 467899999999999999999
Q ss_pred CCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 013238 325 RAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 403 (447)
Q Consensus 325 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 403 (447)
.||+........ ..+...++. .......+.+... .+....+..++.+||..+|.+||+++++-..++.+.-
T Consensus 156 ~~~~~~~~~~~~-~eii~~~~~-----~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 156 GPFDLRNLVEDP-DEIILRVKK-----GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred CccccccccCCh-HHHHHHHHh-----cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999753322221 122222222 0111111111111 1333468999999999999999999999998887654
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.87 E-value=1.7e-21 Score=171.70 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=107.4
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccc-h------------------------HHHHHHHHHHHHhcCCCce
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG-G------------------------ELQFQTEVEMISMAVHRNL 181 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~------------------------~~~~~~e~~~l~~l~h~ni 181 (447)
...||+|++|.||+|...+|+.||||+++...... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999999998889999999997542210 0 0122458889999887776
Q ss_pred eeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCceecCCCCCCEEEC
Q 013238 182 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL-HDHCDPKIIHRDVKAANILLD 260 (447)
Q Consensus 182 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~dlk~~Nill~ 260 (447)
.....+.. ...++||||++++++....... .+++......++.|++.+|.|+ |+. +|+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 43332222 2348999999887766543222 2488899999999999999999 688 999999999999998
Q ss_pred CCCcEEEeecCCcccc
Q 013238 261 EEFEAVVGDFGLAKLM 276 (447)
Q Consensus 261 ~~~~~kl~Dfgl~~~~ 276 (447)
++.++|+|||++...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999999754
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.87 E-value=1.3e-22 Score=207.28 Aligned_cols=260 Identities=23% Similarity=0.254 Sum_probs=188.3
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHH---HHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQT---EVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~---e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
++...+.||++.|=+|.+|++.+|. |+||++-+....-....+.+ |++ ...++|||.+++.-+-......|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4556678999999999999998877 88999865543333333333 444 566789999998877666777788888
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccC--
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-- 277 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~-- 277 (447)
|... +|.+.+..+ +-+...+.+-|+.|++.||.-+|.. +|+|||||.+||||+.=.-+.|+||...+...
T Consensus 102 yvkh-nLyDRlSTR----PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR----PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhhccc----hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 8844 788777443 3367788889999999999999999 99999999999999998899999998765332
Q ss_pred CCCCce----eeccccccCccccccccCC-----------CCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHH
Q 013238 278 YKDTHV----TTAVRGTIGHIAPEYLSTG-----------KSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLL 341 (447)
Q Consensus 278 ~~~~~~----~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 341 (447)
...... .........|+|||.+... ..+++-||||+||++.||++ |+++|.....-......
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-- 251 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-- 251 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC--
Confidence 111111 1112234579999987431 14678999999999999988 78899643221110000
Q ss_pred HHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCchhhHHH
Q 013238 342 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEW 410 (447)
Q Consensus 342 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 410 (447)
....++++... +...+..++..|++.||.+|.++++.|+.-.+..+++.+...
T Consensus 252 --------~~~~e~~Le~I--------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~F 304 (1431)
T KOG1240|consen 252 --------ADDPEQLLEKI--------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSF 304 (1431)
T ss_pred --------ccCHHHHHHhC--------cCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHH
Confidence 00111111110 012478899999999999999999999999999999988764
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86 E-value=6.8e-22 Score=176.18 Aligned_cols=174 Identities=10% Similarity=0.095 Sum_probs=133.1
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchH--HH------HHHHHHHHHhcCCCceeeEeeeeec
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGE--LQ------FQTEVEMISMAVHRNLLRLRGFCMT 190 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~--~~------~~~e~~~l~~l~h~niv~l~~~~~~ 190 (447)
+..++|+..+++|.|+||.||++.. ++..+|||.+......... .. +.+|+..+.++.|++|..+..++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 5578999999999999999999766 5678999999755432221 11 5789999999999999999887553
Q ss_pred C--------CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC
Q 013238 191 P--------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE 262 (447)
Q Consensus 191 ~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~ 262 (447)
. ...+++|||++|.+|.++.. ++. ....+++.+|..+|+. +++|||++|+||+++++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKN 171 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCC
Confidence 2 35789999999999977632 222 2455889999999999 99999999999999998
Q ss_pred CcEEEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh
Q 013238 263 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 322 (447)
Q Consensus 263 ~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt 322 (447)
| ++|+|||........... ..++....+..++|+||||+.+..+..
T Consensus 172 g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred C-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 8 999999988644211100 013334456678999999998776543
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.85 E-value=1.6e-20 Score=166.08 Aligned_cols=140 Identities=19% Similarity=0.208 Sum_probs=109.9
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccc--------------------h-----HHHHHHHHHHHHhcCCCce
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG--------------------G-----ELQFQTEVEMISMAVHRNL 181 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------~-----~~~~~~e~~~l~~l~h~ni 181 (447)
.+.||+|++|.||+|...+|+.||||+++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999998789999999997542110 0 1123578889999999987
Q ss_pred eeEeeeeecCCcceEEEecccCCcchhh-hhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCEEE
Q 013238 182 LRLRGFCMTPTERLLVYPFMVNGSVASC-LRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILL 259 (447)
Q Consensus 182 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~dlk~~Nill 259 (447)
.....+... ..++||||++++++... +.. ..++......++.+++.++.+||+ . +|+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 544433332 35899999988755433 322 136788899999999999999999 8 99999999999999
Q ss_pred CCCCcEEEeecCCccccC
Q 013238 260 DEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 260 ~~~~~~kl~Dfgl~~~~~ 277 (447)
+ ++.++|+|||++....
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 7899999999998654
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=1e-20 Score=173.68 Aligned_cols=232 Identities=23% Similarity=0.311 Sum_probs=144.7
Q ss_pred CCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCC----------CceeeEeeeee---
Q 013238 126 NRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVH----------RNLLRLRGFCM--- 189 (447)
Q Consensus 126 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~--- 189 (447)
..+.||.|+++.||.+.+. +|+.+|+|++..... ....+.+.+|.-....+.+ -.++-.++...
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3567999999999999987 589999999864432 2223445555544433222 11221122111
Q ss_pred ------cC---C-----cceEEEecccCCcchhhhhh---cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC
Q 013238 190 ------TP---T-----ERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDV 252 (447)
Q Consensus 190 ------~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dl 252 (447)
.. . +.+++|+-+ .++|..++.. .......+....++.+..|+++.+++||+. |++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 11 1 235677777 6688777543 222222345566677889999999999999 9999999
Q ss_pred CCCCEEECCCCcEEEeecCCccccCCCCCceeeccccccCccccccccC--------CCCCchhhhHHHHHHHHHHHhCC
Q 013238 253 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST--------GKSSEKTDVFGYGVMLLELITGQ 324 (447)
Q Consensus 253 k~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlG~il~elltg~ 324 (447)
+|+|++++.+|.++|+||+.....+. .......+..|.+||.... -.++.+.|.|+||+++|.|.+|.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~----~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGT----RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTE----EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCc----eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 99999999999999999987764322 2221335678999997643 24688999999999999999999
Q ss_pred CCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCC
Q 013238 325 RAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMER 388 (447)
Q Consensus 325 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 388 (447)
.||+.......... .+ .... +.++.+..+|..+|+.||.+|
T Consensus 248 lPf~~~~~~~~~~~---------------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPEW---------------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSGG---------------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCccccccc---------------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99974322211110 11 1122 667789999999999999988
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=5.7e-21 Score=175.91 Aligned_cols=199 Identities=22% Similarity=0.282 Sum_probs=137.5
Q ss_pred cCCCceeeEeeeeecC---------------------------CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHH
Q 013238 176 AVHRNLLRLRGFCMTP---------------------------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 228 (447)
Q Consensus 176 l~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i 228 (447)
.+|||||++.++|.+. ...|+||... ..+|..++..+. .+.....-|
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~-----~s~r~~~~~ 346 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH-----RSYRTGRVI 346 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC-----CchHHHHHH
Confidence 3599999998876421 2347888777 348888886543 556677788
Q ss_pred HHHHHHHHHHHHhCCCCCceecCCCCCCEEE--CCCC--cEEEeecCCccccCCCC-----CceeeccccccCccccccc
Q 013238 229 ALGAARGLAYLHDHCDPKIIHRDVKAANILL--DEEF--EAVVGDFGLAKLMDYKD-----THVTTAVRGTIGHIAPEYL 299 (447)
Q Consensus 229 ~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill--~~~~--~~kl~Dfgl~~~~~~~~-----~~~~~~~~gt~~y~aPE~~ 299 (447)
+.|+++|+.|||.+ +|.|||+|++|||| |+++ .+.|+|||++-..+... ....-...|.-..||||+.
T Consensus 347 laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 99999999999999 99999999999998 4444 46799999875432211 1111223467789999988
Q ss_pred cCCC------CCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHH
Q 013238 300 STGK------SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQL 373 (447)
Q Consensus 300 ~~~~------~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 373 (447)
...+ .-.|+|.|+.|.+.||+++...||..- .+. .++.....+---+ ..+..++..+
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~r-----Gem--------~L~~r~Yqe~qLP----alp~~vpp~~ 486 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKR-----GEM--------LLDTRTYQESQLP----ALPSRVPPVA 486 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCccccc-----chh--------eechhhhhhhhCC----CCcccCChHH
Confidence 5432 245899999999999999999999531 110 1111111111111 2233344557
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 374 IQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 374 ~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
.+++...++.||++|++.+-....|+-
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl~L 513 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVLNL 513 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHHHH
Confidence 888899999999999998777666653
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=6.7e-20 Score=159.90 Aligned_cols=184 Identities=17% Similarity=0.083 Sum_probs=137.0
Q ss_pred CCCeeeecCCeEEEEEEECCCcEEEEEEeccccccc---hHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEEecc
Q 013238 126 NRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG---GELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 126 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
....|++|+||+|+.+.. .+.+++.+.+.....-. ....+.+|+++++++. |+++++++++ +..+++|+|+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 346799999999997766 57888888776543311 1224789999999995 5778888886 4469999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC-CCCCEEECCCCcEEEeecCCccccCCCC
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDV-KAANILLDEEFEAVVGDFGLAKLMDYKD 280 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfgl~~~~~~~~ 280 (447)
.|.+|...+.. . ...++.+++++|.++|++ ||+|||| ||.|||++.++.++|+|||++.......
T Consensus 81 ~G~~L~~~~~~----------~-~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPPR----------G-DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhhh----------h-hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99888654311 1 135678899999999999 9999999 7999999999999999999998654322
Q ss_pred Cc----e--------eeccccccCccccccccCC-CCC-chhhhHHHHHHHHHHHhCCCCcc
Q 013238 281 TH----V--------TTAVRGTIGHIAPEYLSTG-KSS-EKTDVFGYGVMLLELITGQRAFD 328 (447)
Q Consensus 281 ~~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwSlG~il~elltg~~p~~ 328 (447)
.. . ......++.|+.|+...-. ..+ ...+.++-|.-+|.++|+..+.-
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 10 0 0112256777788754322 233 56788999999999999998873
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.82 E-value=5.9e-21 Score=186.13 Aligned_cols=234 Identities=26% Similarity=0.268 Sum_probs=178.0
Q ss_pred eeecCCeEEEEEEE----CCCcEEEEEEeccccccchH-HHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEEecccC
Q 013238 130 LGRGGFGKVYKGRL----TDGSLVAVKRLKEERTQGGE-LQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 130 lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~-~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
+|+|.||.|+++.- ..|..+|.|.+++....... .....|-.++...+ ||.++++...++.+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 78999999998742 24778899988654322211 13445667777777 99999999999999999999999999
Q ss_pred CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCce
Q 013238 204 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 283 (447)
Q Consensus 204 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 283 (447)
|+|...+.... .+.+.....+...++-++.++|.. +++|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~~~~----~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEV----MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred chhhhccccCC----chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 99998886543 367777888888999999999999 9999999999999999999999999999865322221
Q ss_pred eeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCC
Q 013238 284 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 363 (447)
Q Consensus 284 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 363 (447)
+||..|||||++. .+..++|.||||++++||+||..||.. +.+...++. ..
T Consensus 154 ----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~-----------~~ 204 (612)
T KOG0603|consen 154 ----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKA-----------EL 204 (612)
T ss_pred ----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhh-----------cc
Confidence 7899999999997 677889999999999999999999953 112222211 11
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH--HHHHHHHhc
Q 013238 364 NYIEEEVEQLIQVALLCTQGSPMERPKM--SEVVRMLEG 400 (447)
Q Consensus 364 ~~~~~~~~~l~~li~~cl~~dP~~RPt~--~evl~~L~~ 400 (447)
..+........+++..++..+|..|--. +.+.+..+.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h 243 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQH 243 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhcc
Confidence 2234444556667777778899999765 344444443
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=4.2e-20 Score=192.23 Aligned_cols=201 Identities=21% Similarity=0.260 Sum_probs=158.2
Q ss_pred HHHHHHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcC---CCceeeEeeeeecC
Q 013238 115 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV---HRNLLRLRGFCMTP 191 (447)
Q Consensus 115 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 191 (447)
.+.++..+.|.+.+.||+|+||+||+|...+|+.||+|+-+....-. |--=.+++.+|+ -+-|..+...+.-.
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 34566678899999999999999999998889999999876543221 111122333333 22344444444556
Q ss_pred CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC-------CCCc
Q 013238 192 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-------EEFE 264 (447)
Q Consensus 192 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~-------~~~~ 264 (447)
+..++|+||.+.|+|.++++.. ..++|..+..++.|++..+..||.. +|||+||||+|+||. +...
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred CcceeeeeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccc
Confidence 7789999999999999999843 3489999999999999999999999 999999999999993 2345
Q ss_pred EEEeecCCccccC-CCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCC
Q 013238 265 AVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 326 (447)
Q Consensus 265 ~kl~Dfgl~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p 326 (447)
++|+|||.+..+. ..+.......++|-.+-.+|...|..++...|.|.|+.+++-||.|+..
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 8999999986543 2333456667789999999999999999999999999999999999743
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=1.5e-18 Score=154.42 Aligned_cols=136 Identities=21% Similarity=0.230 Sum_probs=103.9
Q ss_pred CCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhc-----CCCceeeEeeeeecCC---cc
Q 013238 124 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-----VHRNLLRLRGFCMTPT---ER 194 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~ 194 (447)
+...+.||+|+||.||. .. ++.. +||++..... .....+.+|+.+++.+ .||||++++|++.+.. ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 34457899999999996 43 3444 6998865422 2345689999999999 5799999999998763 32
Q ss_pred e-EEEec--ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCceecCCCCCCEEECC----CCcEE
Q 013238 195 L-LVYPF--MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL-AYLHDHCDPKIIHRDVKAANILLDE----EFEAV 266 (447)
Q Consensus 195 ~-lv~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l-~yLH~~~~~~ivH~dlk~~Nill~~----~~~~k 266 (447)
+ +|+|| +.+|+|.+++.+.. +++. ..++.+++.++ +|||++ +|+||||||+|||++. ++.++
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEE
Confidence 3 78999 55799999996532 4444 35577777777 999999 9999999999999974 34799
Q ss_pred EeecCCc
Q 013238 267 VGDFGLA 273 (447)
Q Consensus 267 l~Dfgl~ 273 (447)
|+||+-+
T Consensus 150 LiDg~G~ 156 (210)
T PRK10345 150 VCDNIGE 156 (210)
T ss_pred EEECCCC
Confidence 9995443
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.77 E-value=4.1e-18 Score=155.24 Aligned_cols=142 Identities=14% Similarity=0.094 Sum_probs=109.6
Q ss_pred CCCCCCeeeecCCeEEEEEE--ECCCcEEEEEEeccccccc-----------------------hHHHHHHHHHHHHhcC
Q 013238 123 NFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLKEERTQG-----------------------GELQFQTEVEMISMAV 177 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~ 177 (447)
.|.+.+.||+|++|.||+|. ..+|+.||+|+++...... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999998 4579999999987432100 1123567999999887
Q ss_pred CCc--eeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-ceecCCCC
Q 013238 178 HRN--LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK-IIHRDVKA 254 (447)
Q Consensus 178 h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-ivH~dlk~ 254 (447)
+.. +..++++ ...++||||+.+++|....... ..+.......++.+++.++.+||++ + ++||||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD----VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc----CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 533 3344443 2458999999998887654222 1255666788999999999999999 8 99999999
Q ss_pred CCEEECCCCcEEEeecCCcccc
Q 013238 255 ANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 255 ~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+||+++ ++.++|+|||.+...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 889999999998753
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=8.4e-18 Score=151.49 Aligned_cols=135 Identities=20% Similarity=0.320 Sum_probs=112.7
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccc-------hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG-------GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
+.||+|++|.||+|.. .|..+++|......... ....+.+|++++..+.|+++.....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 57789999865432211 123477899999999999988777777777888999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
++|++|.+++.... . .+..++.+++.+|.+||+. +++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~~-------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999886421 2 7788999999999999999 999999999999999 78999999998864
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=2.8e-19 Score=171.27 Aligned_cols=174 Identities=25% Similarity=0.367 Sum_probs=129.5
Q ss_pred cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCC
Q 013238 193 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 272 (447)
Q Consensus 193 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 272 (447)
..++.|++|...+|.++|..+... ...++...+.++.|++.|+.| + +.+|+|+||.||+...+..+||+|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~-e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTG-EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcc-cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 468999999999999999765433 347889999999999999999 6 899999999999999999999999999
Q ss_pred ccccCCCC-----CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHH
Q 013238 273 AKLMDYKD-----THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKG 346 (447)
Q Consensus 273 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 346 (447)
........ ....+...||..||+||.+.+..|+.++||||||+||+|++. =...++.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----------------- 465 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----------------- 465 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------------
Confidence 87654433 223444569999999999999999999999999999999997 2222221
Q ss_pred HhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 013238 347 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEV 394 (447)
Q Consensus 347 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 394 (447)
.....++-|..+...+..+. ..=..++.+++...|.+||++.++
T Consensus 466 ---~~t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 466 ---IATLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ---HHhhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 11122222222221111111 123467888999999999954443
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.75 E-value=1.3e-17 Score=148.54 Aligned_cols=138 Identities=20% Similarity=0.153 Sum_probs=107.9
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCcEEEEEEecccccc---------------------chHHHHHHHHHHHHhcCCCc-
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ---------------------GGELQFQTEVEMISMAVHRN- 180 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~e~~~l~~l~h~n- 180 (447)
.|...+.||+|+||.||++...+|+.||||++...... ........|+..+..+.|.+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 47778899999999999999888999999987643210 01123567888888887774
Q ss_pred -eeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEE
Q 013238 181 -LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 259 (447)
Q Consensus 181 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill 259 (447)
+...++ ....+++|||+++++|...... .....++.+++.++.++|+. +++|+||+|.||++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill 158 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILV 158 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEE
Confidence 444433 2456899999999988765421 23457888999999999998 99999999999999
Q ss_pred CCCCcEEEeecCCccccC
Q 013238 260 DEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 260 ~~~~~~kl~Dfgl~~~~~ 277 (447)
++++.++|+|||++....
T Consensus 159 ~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCcEEEEECCccccCC
Confidence 999999999999997544
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.74 E-value=1.6e-17 Score=148.29 Aligned_cols=131 Identities=18% Similarity=0.302 Sum_probs=105.7
Q ss_pred eeeecCCeEEEEEEECCCcEEEEEEeccccccc-------hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecc
Q 013238 129 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG-------GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFM 201 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 201 (447)
.||+|++|.||+|.. +|..+++|......... ....+.+|++++..+.|+++.....++......+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999986 46789999865432111 1235678999999999887655555555667789999999
Q ss_pred cCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 202 VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 202 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
+|++|.+++.... . .++.+++.+|.+||+. +++|+|++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~-----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN-----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH-----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998875421 0 7889999999999999 999999999999999 78999999999875
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.73 E-value=2.8e-17 Score=168.26 Aligned_cols=137 Identities=18% Similarity=0.277 Sum_probs=110.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCcEEEEEEe-ccc-ccc-----chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcc
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL-KEE-RTQ-----GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~-~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 194 (447)
..|...+.||+|+||+||+|.+.+.. +++|+. .+. ... .....+.+|++++..++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 44566789999999999999876443 444432 221 111 1124578899999999999998888777777788
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
++||||+++++|.+++. ....++.+++++|.|||+. +++||||||+|||+ +++.++|+|||+++
T Consensus 412 ~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred EEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 99999999999998875 2467899999999999999 99999999999999 67799999999997
Q ss_pred c
Q 013238 275 L 275 (447)
Q Consensus 275 ~ 275 (447)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 5
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73 E-value=5.4e-18 Score=173.61 Aligned_cols=210 Identities=21% Similarity=0.307 Sum_probs=139.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEe
Q 013238 121 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 121 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 199 (447)
..+|+.++.|..|++|.||.++++ ..+.+|+| +++... +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l------ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL------ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch------hhhc--cccccCCccee-----------------
Confidence 357899999999999999999876 36778884 332211 1110 22222233322
Q ss_pred cccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCC
Q 013238 200 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 279 (447)
Q Consensus 200 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 279 (447)
|+-...++..+. ++... +.+++|||+. +|+|||+||+|.+|+.-|++|++|||+++.....
T Consensus 136 ----gDc~tllk~~g~----lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 ----GDCATLLKNIGP----LPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred ----chhhhhcccCCC----Ccchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 454555544321 22222 6789999999 9999999999999999999999999998754211
Q ss_pred C--------------CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHH
Q 013238 280 D--------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 345 (447)
Q Consensus 280 ~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 345 (447)
. ......++||+.|.|||++....|...+|+|++|+|+||.+-|+.||... ..+..+ .
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd----tpeelf----g 268 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD----TPEELF----G 268 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC----CHHHHH----h
Confidence 1 01123457999999999999999999999999999999999999999531 111111 1
Q ss_pred HHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM 391 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 391 (447)
.++.+... + .+.......+..+++.+.|+.+|.+|--.
T Consensus 269 ~visd~i~--w------pE~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 269 QVISDDIE--W------PEEDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred hhhhhhcc--c------cccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 11111100 0 01111223446677778889999999543
No 431
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=1.6e-15 Score=128.51 Aligned_cols=134 Identities=18% Similarity=0.136 Sum_probs=112.3
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC--CceeeEeeeeecCCcceEEEecccCC
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH--RNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
.+.||+|.++.||++...+ ..+++|....... ...+..|+..+..+.| .++.+++++....+..+++|||+.++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 4679999999999999864 7899999865433 3468889999999876 58889988887778899999999887
Q ss_pred cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 205 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 205 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
.+..+ +......++.++++++++||.....+++|+|++|.||++++.+.+++.|||.+..
T Consensus 79 ~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 76654 4456678889999999999986444799999999999999989999999998864
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.65 E-value=1.3e-15 Score=134.48 Aligned_cols=137 Identities=20% Similarity=0.210 Sum_probs=97.2
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccchH-HH----------------------HHHHHHHHHhcCCCc--e
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGE-LQ----------------------FQTEVEMISMAVHRN--L 181 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-~~----------------------~~~e~~~l~~l~h~n--i 181 (447)
.+.||+|+||+||+|...+|+.||||++......... .. ...|.+.+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998653221110 00 134555555554332 3
Q ss_pred eeEeeeeecCCcceEEEecccCCcchh-hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCEEE
Q 013238 182 LRLRGFCMTPTERLLVYPFMVNGSVAS-CLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILL 259 (447)
Q Consensus 182 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~dlk~~Nill 259 (447)
.+.++. ...+++|||++++.+.. .+.... .. .....++.+++.++.++|. . +++|+||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 333332 34689999999865432 122111 11 5567899999999999999 7 99999999999999
Q ss_pred CCCCcEEEeecCCccccC
Q 013238 260 DEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 260 ~~~~~~kl~Dfgl~~~~~ 277 (447)
+ ++.++|+|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8899999999997543
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=4.9e-17 Score=166.07 Aligned_cols=255 Identities=21% Similarity=0.278 Sum_probs=184.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC--CcEEEEEEecccc-ccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEE
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD--GSLVAVKRLKEER-TQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 197 (447)
..|...+.||+|.|+.|-...... ...+|+|.+.... ..........|..+-..+. |.|++.+++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 356666779999999998887543 4456777665432 1222223444666666666 99999999999999999999
Q ss_pred EecccCCcchhhh-hhcCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCceecCCCCCCEEECCCC-cEEEeecCCcc
Q 013238 198 YPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAARGLAYLH-DHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAK 274 (447)
Q Consensus 198 ~e~~~~gsL~~~l-~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH-~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~ 274 (447)
.+|..++++...+ +.... ..+......++.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||+|.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~---~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDST---GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cCcccccccccccccCCcc---CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 9999999999988 43321 2455566778999999999999 77 999999999999999999 99999999998
Q ss_pred ccCC--CCCceeecccc-ccCccccccccCC-CCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhc
Q 013238 275 LMDY--KDTHVTTAVRG-TIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 350 (447)
Q Consensus 275 ~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 350 (447)
.... .........+| ++.|+|||...+. ......|+||.|+++.-+++|..|++.+..... ....|....
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~--- 247 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---RYSSWKSNK--- 247 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---cceeecccc---
Confidence 7665 22333444567 9999999999885 457789999999999999999999976443221 111111110
Q ss_pred cccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 351 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 351 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
................++..+++..+|..|.+.+++..
T Consensus 248 --------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 --------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred --------cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00001111222334667777888899999999877654
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.62 E-value=6.4e-15 Score=134.57 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=103.7
Q ss_pred CCeee-ecCCeEEEEEEECCCcEEEEEEeccccc------------cchHHHHHHHHHHHHhcCCCce--eeEeeeeecC
Q 013238 127 RNILG-RGGFGKVYKGRLTDGSLVAVKRLKEERT------------QGGELQFQTEVEMISMAVHRNL--LRLRGFCMTP 191 (447)
Q Consensus 127 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~ 191 (447)
...|| .|+.|+||.+... +..++||.+..... ......+.+|++++..+.|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8999999999885 67789998853210 1123457889999999998875 6666664432
Q ss_pred C-c---ceEEEecccC-CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 192 T-E---RLLVYPFMVN-GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 192 ~-~---~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
. . .++|||++++ .+|.+++... +++.. .+.+++.+|.+||+. ||+|+||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 2 2599999997 6888887542 24443 356789999999999 999999999999999999999
Q ss_pred EeecCCccc
Q 013238 267 VGDFGLAKL 275 (447)
Q Consensus 267 l~Dfgl~~~ 275 (447)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999998875
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.55 E-value=3.2e-15 Score=135.20 Aligned_cols=206 Identities=18% Similarity=0.288 Sum_probs=142.8
Q ss_pred HHHHHHhcCCCceeeEeeeeecC-----CcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 013238 169 EVEMISMAVHRNLLRLRGFCMTP-----TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 243 (447)
Q Consensus 169 e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~ 243 (447)
-+..+-.+.|.|||+++.|+.+. ....++.|||..|++..+|++.......+......+|+.||+.||.|||+ |
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~ 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-C 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence 34556677799999999887653 34679999999999999999877766678889999999999999999999 5
Q ss_pred CCCceecCCCCCCEEECCCCcEEEeecCCccccCCC----CCceeeccccccCccccccccCCCCCchhhhHHHHHHHHH
Q 013238 244 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK----DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 319 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~e 319 (447)
.|.|+|+++.-+.|++..+|-+|++----.. .... .........+-++|.|||.=...+.+.++|||+||+..+|
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 7889999999999999999988875322111 1100 0111122236789999998766777889999999999999
Q ss_pred HHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 013238 320 LITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 397 (447)
Q Consensus 320 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 397 (447)
|..|..--.. ......++. ........+...+ =..++..|++..|..||+|++++..
T Consensus 275 mailEiq~tn-----seS~~~~ee-----~ia~~i~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 275 MAILEIQSTN-----SESKVEVEE-----NIANVIIGLENGL-----------QRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HHHheeccCC-----Ccceeehhh-----hhhhheeeccCcc-----------ccCcCcccccCCCCCCcchhhhhcC
Confidence 9876532111 000000000 0000000001111 1235678999999999999988753
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.49 E-value=2.9e-13 Score=134.25 Aligned_cols=141 Identities=23% Similarity=0.255 Sum_probs=99.1
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccch---------------------------------------HHHHHH
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG---------------------------------------ELQFQT 168 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---------------------------------------~~~~~~ 168 (447)
+.||+|++|.||+|++.+|+.||||+.+......- +..+.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999999999999999865421100 012334
Q ss_pred HHHHHHhc----CCCceeeEeeeee-cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHH-HHHHHHhC
Q 013238 169 EVEMISMA----VHRNLLRLRGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR-GLAYLHDH 242 (447)
Q Consensus 169 e~~~l~~l----~h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~-~l~yLH~~ 242 (447)
|...+.++ .|.+-+.+-.++. .....++||||++|++|.++....... . .+..++..++. .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~---~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG---L---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC---C---CHHHHHHHHHHHHHHHHHhC
Confidence 44444443 2333333333332 234579999999999999876542111 2 23456666555 46788988
Q ss_pred CCCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 243 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 243 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|++|+|++|.||++++++.++++|||++..+.
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999997654
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=4.8e-14 Score=138.08 Aligned_cols=249 Identities=21% Similarity=0.190 Sum_probs=177.7
Q ss_pred hCCCCCCeeee--cCCeEEEEEEE--C-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcc
Q 013238 122 DNFSNRNILGR--GGFGKVYKGRL--T-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTER 194 (447)
Q Consensus 122 ~~~~~~~~lg~--G~~g~V~~~~~--~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 194 (447)
..|.....+|. |.+|.||.+.. . ++..+|+|.-+.... ......-.+|+....+++ |+|.++....+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 45566677999 99999999987 3 578899998433221 122223345666666664 99999988888888899
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEee
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR----GLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGD 269 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~D 269 (447)
++-.|++ +.+|..+.+..... ++....+.++.+..+ ||.++|+. +++|-|+||.||++..+ ...+++|
T Consensus 194 fiqtE~~-~~sl~~~~~~~~~~---~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 194 FIQTELC-GESLQSYCHTPCNF---LPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred eeeeccc-cchhHHhhhccccc---CCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCC
Confidence 9999999 57888888765442 556666777777777 99999999 99999999999999999 8899999
Q ss_pred cCCccccCCCCCc----eeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHH
Q 013238 270 FGLAKLMDYKDTH----VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 345 (447)
Q Consensus 270 fgl~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 345 (447)
||+...+....-. ......|...|++||.. .+.++..+|+|++|.++.+..++......... ..
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~---~~-------- 334 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKN---SS-------- 334 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCC---CC--------
Confidence 9999877544311 11222477789999987 55778899999999999999998776632100 00
Q ss_pred HHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 013238 346 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 396 (447)
Q Consensus 346 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 396 (447)
..++-...+..++.......+...+.++++.+|..|++.+.+..
T Consensus 335 -------W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 335 -------WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -------ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111111222233333445666888999999999999775543
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.43 E-value=6.3e-12 Score=124.56 Aligned_cols=236 Identities=17% Similarity=0.166 Sum_probs=157.7
Q ss_pred CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHH
Q 013238 144 TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWS 223 (447)
Q Consensus 144 ~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~ 223 (447)
.++.+|.|...+.... .......+-++.++.++||||++++.........|+|+|.+. -|..++.+. ...
T Consensus 35 ~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l-------~~~ 104 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL-------GKE 104 (690)
T ss_pred ccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh-------HHH
Confidence 3678888888765443 333456778889999999999999999999999999999873 455666553 356
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeeccccccCccccccccCCC
Q 013238 224 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 303 (447)
Q Consensus 224 ~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 303 (447)
.....+.||+.||.|||+.| +++|++|.-+.|+|+..|+.||++|.++........ ......--..|..|+.+....
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc
Confidence 67778899999999999877 999999999999999999999999998764332221 001111122466666543322
Q ss_pred CCchhhhHHHHHHHHHHHhCCCCcccc-cccCCCc-ccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHcc
Q 013238 304 SSEKTDVFGYGVMLLELITGQRAFDLA-RLANDDD-VMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCT 381 (447)
Q Consensus 304 ~~~~sDvwSlG~il~elltg~~p~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl 381 (447)
-..|.|-|||+++|++.|..+-... ....... ..+..+.+.+...+ .. . ...++++..|.
T Consensus 182 --~s~D~~~Lg~li~el~ng~~~~~~~~~~~~~ipk~~~~~~~k~~~~~~---------~~------r-~n~~~~~~~~~ 243 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNGSLLTKTDLSNTGKIPKALIELYCKKLGATE---------LK------R-PNKLRFILECR 243 (690)
T ss_pred --cchhhhhHHHHHHHHhCcccCcchhhhccCccchhHHHHHHHHhcccc---------cc------c-cchhhHHHHHH
Confidence 3469999999999999993322110 0000000 00000001110000 00 0 01566777788
Q ss_pred CCCCCCCCCHHHHHHHHhcCCCchhhHHH
Q 013238 382 QGSPMERPKMSEVVRMLEGDGLAERWEEW 410 (447)
Q Consensus 382 ~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 410 (447)
......|=-+-+++.+|+...+++.-++.
T Consensus 244 ~~~gff~n~fvd~~~fLeel~lks~~eK~ 272 (690)
T KOG1243|consen 244 LLGGFFRNDFVDTLLFLEELRLKSVEEKQ 272 (690)
T ss_pred hccccccchHHHHHHHHHhcccCcHHHHH
Confidence 88888888889999999998887665553
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.37 E-value=3e-12 Score=111.00 Aligned_cols=130 Identities=20% Similarity=0.170 Sum_probs=94.8
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCcee-eEeeeeecCCcceEEEecccCCcc
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL-RLRGFCMTPTERLLVYPFMVNGSV 206 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL 206 (447)
+.|+.|.++.||++... +..+++|....... ....+..|.+.+..+.+.+++ +++.+. ....++||||+++.++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 56889999999999875 77899998765432 122467788888887655544 344433 3346899999999887
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 207 ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC--DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 207 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
.... . ....++.+++++|+.||... ..+++|+|++|.||+++ ++.++++||+.+..
T Consensus 79 ~~~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6430 0 11245678899999999982 12359999999999999 66899999998763
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.37 E-value=7.4e-13 Score=132.97 Aligned_cols=146 Identities=22% Similarity=0.244 Sum_probs=94.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CcEEEEEEeccccccc---------------------------------hH----
Q 013238 122 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQG---------------------------------GE---- 163 (447)
Q Consensus 122 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---------------------------------~~---- 163 (447)
..|+. +.||+|++|.||+|++.+ |+.||||+.+...... -.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45665 679999999999999987 9999999997542110 00
Q ss_pred --HHHHHHHHHHHhc----CCCceeeEeeeeec-CCcceEEEecccCCcchhh--hhhcCCCCCCCCHHHHHHHHHHHHH
Q 013238 164 --LQFQTEVEMISMA----VHRNLLRLRGFCMT-PTERLLVYPFMVNGSVASC--LRERGQSQPPLNWSVRKQIALGAAR 234 (447)
Q Consensus 164 --~~~~~e~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~--l~~~~~~~~~l~~~~~~~i~~~i~~ 234 (447)
..+.+|...+.++ .+.+.+.+-.++.+ ....++||||+.|+.+.++ +...+.....+....+..++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 1233444444333 24444444444433 4567899999999999774 2222211111222222233333
Q ss_pred HHHHHHhCCCCCceecCCCCCCEEECCCC----cEEEeecCCccccCC
Q 013238 235 GLAYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDFGLAKLMDY 278 (447)
Q Consensus 235 ~l~yLH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl~~~~~~ 278 (447)
+... |++|+|+||.||+++.++ ++++.|||+...++.
T Consensus 276 ----if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 ----VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3345 999999999999999988 999999999987643
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.29 E-value=7.8e-11 Score=103.07 Aligned_cols=137 Identities=15% Similarity=0.119 Sum_probs=97.9
Q ss_pred CeeeecCCeEEEEEEECC-------CcEEEEEEeccccc---------------------cchHHHH----HHHHHHHHh
Q 013238 128 NILGRGGFGKVYKGRLTD-------GSLVAVKRLKEERT---------------------QGGELQF----QTEVEMISM 175 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~---------------------~~~~~~~----~~e~~~l~~ 175 (447)
..||.|.-+.||.|...+ +..+|||+.+.... ......+ .+|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 569999999999998653 47899998853210 0111222 378888888
Q ss_pred cCC--CceeeEeeeeecCCcceEEEecccCCcchh-hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCceecC
Q 013238 176 AVH--RNLLRLRGFCMTPTERLLVYPFMVNGSVAS-CLRERGQSQPPLNWSVRKQIALGAARGLAYL-HDHCDPKIIHRD 251 (447)
Q Consensus 176 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~d 251 (447)
+.. -++..++++ ...++||||+.++.+.. .+... .++......+..+++.+|..| |.. +++|+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 753 455556654 56799999997654422 22221 244556677889999999999 787 999999
Q ss_pred CCCCCEEECCCCcEEEeecCCccccC
Q 013238 252 VKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 252 lk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
|++.||++++ +.+.|+|||.+....
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeCC
Confidence 9999999974 689999999887543
No 442
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.25 E-value=1.2e-10 Score=105.55 Aligned_cols=143 Identities=20% Similarity=0.235 Sum_probs=107.8
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC--CceeeEeeeeecC---CcceEEEeccc
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH--RNLLRLRGFCMTP---TERLLVYPFMV 202 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~e~~~ 202 (447)
+.|+.|..+.||++...+|+.+++|.............+..|.+++..+.+ .++.+++.+.... +..+++|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 568999999999999877788999998654322233467889999988875 3456677766553 25689999999
Q ss_pred CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 013238 203 NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC--------------------------------------- 243 (447)
Q Consensus 203 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~--------------------------------------- 243 (447)
|.++...+.. ..++......++.+++++|+.||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888876532 13666777777888888888887421
Q ss_pred --------------CCCceecCCCCCCEEECC--CCcEEEeecCCccc
Q 013238 244 --------------DPKIIHRDVKAANILLDE--EFEAVVGDFGLAKL 275 (447)
Q Consensus 244 --------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfgl~~~ 275 (447)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 236799999999999998 66789999998764
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=1.4e-11 Score=120.97 Aligned_cols=248 Identities=19% Similarity=0.171 Sum_probs=168.6
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC--CCcEEEEEEeccccccchHH-HHHHHHHHHHhc-CCCceeeEeeeeecCCcce
Q 013238 120 ATDNFSNRNILGRGGFGKVYKGRLT--DGSLVAVKRLKEERTQGGEL-QFQTEVEMISMA-VHRNLLRLRGFCMTPTERL 195 (447)
Q Consensus 120 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~-~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 195 (447)
...+|..+..||.|.|+.|+..... ++..+++|.+.+.......+ .-..|+.+...+ .|.+++.....+...+..+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3457888889999999999988643 57889999886654332221 223444444444 4888888777666667778
Q ss_pred EEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC-CcEEEeecCCcc
Q 013238 196 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLAK 274 (447)
Q Consensus 196 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~ 274 (447)
+--|||+++++.....-. ..++...++.+..+++.++.++|+. .++|+|+||+||++..+ +..+++|||++.
T Consensus 343 ip~e~~~~~s~~l~~~~~----~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTS----QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred CchhhhcCcchhhhhHHH----HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccc
Confidence 999999999887666222 2277788899999999999999998 99999999999999886 788999999987
Q ss_pred ccCCCCCceeeccccccCcc--ccccccCCCCCchhhhHHHHHHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccc
Q 013238 275 LMDYKDTHVTTAVRGTIGHI--APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 352 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (447)
.+...... .....++. +++......+..+.|++|||.-+.|.+++..--... .+|
T Consensus 416 ~~~~~~~~----~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~----------~~~--------- 472 (524)
T KOG0601|consen 416 RLAFSSGV----FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG----------VQS--------- 472 (524)
T ss_pred ccceeccc----ccccccccccchhhccccccccccccccccccccccccCcccCccc----------ccc---------
Confidence 43222111 11223344 555556667889999999999999999987543210 000
Q ss_pred cccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 013238 353 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 400 (447)
Q Consensus 353 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 400 (447)
..+...... ... .....+..+...+...++..||.+.++....+-
T Consensus 473 -~~i~~~~~p-~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 473 -LTIRSGDTP-NLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred -eeeeccccc-CCC-chHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 001111000 001 111345556666778999999998887765543
No 444
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.18 E-value=5.3e-10 Score=105.21 Aligned_cols=290 Identities=15% Similarity=0.151 Sum_probs=181.6
Q ss_pred CCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHh-cCCCceeeEeee------eecCCc-ceEE
Q 013238 126 NRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRNLLRLRGF------CMTPTE-RLLV 197 (447)
Q Consensus 126 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~------~~~~~~-~~lv 197 (447)
..+.||+|+-+.+|-.---.+ .+-|+......... ...++.|.. -.||-+-.=+.+ .-+... .-++
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d--~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRD--QVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCccccCCccceeeecchhhc--hhheeecCCCchHH----HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 346799999999986532212 34566654322111 122333333 235433221111 011222 4567
Q ss_pred EecccCCcchhhh-h--hcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 198 YPFMVNGSVASCL-R--ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 198 ~e~~~~gsL~~~l-~--~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
|..+.+..--..+ . .++.+.+...|...++++..++.+.+-||.. |.+-+|+.++|+|+.+++.+.|.|-....
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccccee
Confidence 7777654222222 1 1334556689999999999999999999999 99999999999999999999998865443
Q ss_pred ccCCCCCceeeccccccCcccccccc-----CCCCCchhhhHHHHHHHHHHHhC-CCCcccccccCCCcccHH-HHHHHH
Q 013238 275 LMDYKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITG-QRAFDLARLANDDDVMLL-DWVKGL 347 (447)
Q Consensus 275 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltg-~~p~~~~~~~~~~~~~~~-~~~~~~ 347 (447)
.. .........+|...|++||.-. +...+...|-|.||+++++++.| ++||...........-+. +.....
T Consensus 166 i~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 166 IN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred ec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 32 2334445566899999999654 33457789999999999999886 999975433222211111 111111
Q ss_pred hhccccccccccccC---CCCc-HHHHHHHHHHHHHccCC--CCCCCCCHHHHHHHHhcCCCchhhHHHHHhhhhhccCC
Q 013238 348 LKEKKLEQLVDSDME---GNYI-EEEVEQLIQVALLCTQG--SPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFN 421 (447)
Q Consensus 348 ~~~~~~~~~~d~~~~---~~~~-~~~~~~l~~li~~cl~~--dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~ 421 (447)
+....-. ..... ...+ .-....+.-+-.+|+.. ++.-|||++-++..|......-..|-...++.|....-
T Consensus 244 f~ya~~~---~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~H~y~~hl~ 320 (637)
T COG4248 244 FAYASDQ---RRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAMHVYPVHLT 320 (637)
T ss_pred eeechhc---cCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcccccccCCCC
Confidence 1100000 00010 1111 11223344455566643 46799999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 013238 422 HTPHPNNT 429 (447)
Q Consensus 422 ~~~~~~~~ 429 (447)
.||-|..+
T Consensus 321 ~CPwCa~~ 328 (637)
T COG4248 321 DCPWCALD 328 (637)
T ss_pred CCchhhhc
Confidence 99999764
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.16 E-value=5.3e-10 Score=94.55 Aligned_cols=132 Identities=20% Similarity=0.305 Sum_probs=97.3
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccc-------hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEec
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG-------GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 200 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 200 (447)
..+++|+-+.++.+.+. |..+++|.-....... ......+|..++.++.--.|.-..=+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999775 4456666543222111 122456788888887655554444455678888999999
Q ss_pred ccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 201 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 201 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
.+|..|.+.+... ...++..+-.-+.-||.. +|+|+||.++||++..+. +.++||||+..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888888654 134556666778889999 999999999999998875 99999999874
No 446
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.15 E-value=1.2e-09 Score=105.39 Aligned_cols=171 Identities=20% Similarity=0.254 Sum_probs=128.1
Q ss_pred CCeEEEEEEEC-CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeec----CCcceEEEecccC-Ccch
Q 013238 134 GFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTERLLVYPFMVN-GSVA 207 (447)
Q Consensus 134 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~ 207 (447)
.-.+.|++... +|..|++|+++..+..... ....-+++++++.|.|+|++.+++.. +...++||+|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n-k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN-KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcc-cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 34678888754 7999999999654433221 12345788999999999999998763 4567899999976 4666
Q ss_pred hhhhhcC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 208 SCLRERG-----------QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 208 ~~l~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
+.-.... ......++..+|.++.|+..||.++|+. |+..+-|.+.+|+++.+.+++|...|+...+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 5432211 1234578899999999999999999999 9999999999999999999999998887765
Q ss_pred CCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCC
Q 013238 277 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 326 (447)
Q Consensus 277 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p 326 (447)
...... .+ .--.+-|.=.||.+++.|.||..-
T Consensus 444 ~~d~~~---------------~l---e~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPTE---------------PL---ESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCCc---------------ch---hHHhhhhHHHHHHHHHHHhhcccc
Confidence 433211 01 112357999999999999998643
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=9.2e-10 Score=92.68 Aligned_cols=144 Identities=18% Similarity=0.253 Sum_probs=103.5
Q ss_pred CCCeeeecCCeEEEEEEECCCcEEEEEEecccccc-------chHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEE
Q 013238 126 NRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ-------GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 126 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 198 (447)
....|-+|+-+.|+++.+. |+.+.||.-...... -...+..+|...+.++.--.|....-++.+.....++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567899999999999986 777777754322211 12335678888888876555544444566777788999
Q ss_pred ecccC-CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc---EEEeecCCcc
Q 013238 199 PFMVN-GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAK 274 (447)
Q Consensus 199 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl~~ 274 (447)
||+++ -++.+++...... .........++..|-+.+.-||.. +++|+||..+||++..++. +.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~--~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED--ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccC--cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99976 3677777654322 122233367778888899999999 9999999999999976553 5899999986
Q ss_pred c
Q 013238 275 L 275 (447)
Q Consensus 275 ~ 275 (447)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 4
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.10 E-value=1.9e-11 Score=126.22 Aligned_cols=251 Identities=19% Similarity=0.201 Sum_probs=162.6
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEEC-CCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCceeeEeeeeecCCcc
Q 013238 118 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 194 (447)
Q Consensus 118 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 194 (447)
....+.+.+.+-+-+|.++.+..+.-. .|...++|......... .......+-.+.-..++|.++....-+......
T Consensus 800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence 345566777777888999998877643 34444444443211100 000111222222223456666554444456778
Q ss_pred eEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 195 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 195 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
+++++|+.+++|...|+... +.+..-.......+.++++|||+. .+.|+|++|.|+++..+++.+++|||...
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred chhhHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccc
Confidence 99999999999999998765 244444455566677899999998 79999999999999999999999998432
Q ss_pred ccCCC---------------------C---------CceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCC
Q 013238 275 LMDYK---------------------D---------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 324 (447)
Q Consensus 275 ~~~~~---------------------~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~ 324 (447)
..... . ........+|+.|.+||...+......+|+|++|++++|.++|.
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC
Confidence 21100 0 01122345899999999999999999999999999999999999
Q ss_pred CCcccccccCCCcccHHHHHHHHhhccccccccccccCC-CCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 013238 325 RAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG-NYIEEEVEQLIQVALLCTQGSPMERPKMS 392 (447)
Q Consensus 325 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 392 (447)
.||...... .....+....... ...........+++...+..+|.+|-.+.
T Consensus 1033 pp~na~tpq-----------------~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1033 PPFNAETPQ-----------------QIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCcchh-----------------hhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 999642211 0011111111111 11223334466677777788999998776
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.06 E-value=2.5e-09 Score=93.27 Aligned_cols=126 Identities=21% Similarity=0.220 Sum_probs=82.1
Q ss_pred EEEEEEECCCcEEEEEEecccccc-------------------------chHHHHHHHHHHHHhcCCC--ceeeEeeeee
Q 013238 137 KVYKGRLTDGSLVAVKRLKEERTQ-------------------------GGELQFQTEVEMISMAVHR--NLLRLRGFCM 189 (447)
Q Consensus 137 ~V~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 189 (447)
.||.|...+|..+|||..+..... .......+|.+.|.++..- ++.+++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 489999988999999998532100 0112467799999999765 45666654
Q ss_pred cCCcceEEEeccc--CCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCCceecCCCCCCEEECCCCcEE
Q 013238 190 TPTERLLVYPFMV--NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY-LHDHCDPKIIHRDVKAANILLDEEFEAV 266 (447)
Q Consensus 190 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~y-LH~~~~~~ivH~dlk~~Nill~~~~~~k 266 (447)
....+||||++ |..+..+.... ++......++.+++..+.. +|.. |++|+||++.||+++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 35689999998 54554433221 1123455677777776655 4677 99999999999999988 999
Q ss_pred EeecCCcccc
Q 013238 267 VGDFGLAKLM 276 (447)
Q Consensus 267 l~Dfgl~~~~ 276 (447)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988654
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.99 E-value=1.3e-08 Score=94.24 Aligned_cols=141 Identities=14% Similarity=0.092 Sum_probs=98.6
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccc----------hHHHHHHHHHHHHhcCCCc--eeeEeeeeec-----
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG----------GELQFQTEVEMISMAVHRN--LLRLRGFCMT----- 190 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~----- 190 (447)
+.+-......|.+..+ +|+.+.||+........ ....+.+|...+.++...+ ...++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4454445556777766 57889999774332111 1113678888887774333 2334444432
Q ss_pred CCcceEEEecccCC-cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECC-------C
Q 013238 191 PTERLLVYPFMVNG-SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-------E 262 (447)
Q Consensus 191 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~-------~ 262 (447)
....++|+|++++. +|.+++..... .+.+......++.+++..+.-||.. ||+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23468999999875 78888754321 2355677788999999999999999 9999999999999975 4
Q ss_pred CcEEEeecCCcc
Q 013238 263 FEAVVGDFGLAK 274 (447)
Q Consensus 263 ~~~kl~Dfgl~~ 274 (447)
..+.++||+.+.
T Consensus 182 ~~~~LIDl~r~~ 193 (268)
T PRK15123 182 LKLSVIDLHRAQ 193 (268)
T ss_pred ceEEEEECCccc
Confidence 679999999875
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.98 E-value=6.2e-09 Score=93.39 Aligned_cols=136 Identities=21% Similarity=0.162 Sum_probs=96.9
Q ss_pred CCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccc---------------------cchHHHHHHHHHHHHhcCCC--c
Q 013238 124 FSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT---------------------QGGELQFQTEVEMISMAVHR--N 180 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------------------~~~~~~~~~e~~~l~~l~h~--n 180 (447)
..+...||-|.-+.||.|...+|.++|||.-+..++ .-.....++|.+.|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 445678999999999999999999999997643221 01223567899999888544 4
Q ss_pred eeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEEC
Q 013238 181 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD 260 (447)
Q Consensus 181 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~ 260 (447)
+.+.+++ +...+||||.+|-.|...- ++......++..|++-+.-+-.. |+||+|++.-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 5555543 5568999999886655432 11222334444444544444455 999999999999999
Q ss_pred CCCcEEEeecCCccc
Q 013238 261 EEFEAVVGDFGLAKL 275 (447)
Q Consensus 261 ~~~~~kl~Dfgl~~~ 275 (447)
++|.+.++||--+..
T Consensus 237 ~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 237 EDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCCEEEEeCccccc
Confidence 999999999987654
No 452
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=5.2e-10 Score=111.60 Aligned_cols=150 Identities=17% Similarity=0.311 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCC--------ceeeccccccCccccccccC
Q 013238 230 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT--------HVTTAVRGTIGHIAPEYLST 301 (447)
Q Consensus 230 ~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~ 301 (447)
.+++.|+.|+|... ++||++|.|++|.++.++..||+.|+.+........ ...........|.|||++.+
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34558999999875 999999999999999999999999998764432111 11111123457999999999
Q ss_pred CCCCchhhhHHHHHHHHHHHh-CCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHc
Q 013238 302 GKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLC 380 (447)
Q Consensus 302 ~~~~~~sDvwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~c 380 (447)
...+.++|+||+|+++|.+.. |+.-+... ...... ......+..-...+....+.++.+-+.++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-----~~~~~~----------~~~~~~~~~~~~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAAN-----GGLLSY----------SFSRNLLNAGAFGYSNNLPSELRESLKKL 248 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhcc-----CCcchh----------hhhhcccccccccccccCcHHHHHHHHHH
Confidence 888999999999999999984 55444321 011111 11111111111122344556688888889
Q ss_pred cCCCCCCCCCHHHHHH
Q 013238 381 TQGSPMERPKMSEVVR 396 (447)
Q Consensus 381 l~~dP~~RPt~~evl~ 396 (447)
+..++.-||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 9999999998877654
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.66 E-value=2.4e-07 Score=82.85 Aligned_cols=104 Identities=20% Similarity=0.209 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhcCCC--ceeeEeeeeecC----CcceEEEecccCC-cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 013238 165 QFQTEVEMISMAVHR--NLLRLRGFCMTP----TERLLVYPFMVNG-SVASCLRERGQSQPPLNWSVRKQIALGAARGLA 237 (447)
Q Consensus 165 ~~~~e~~~l~~l~h~--niv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~ 237 (447)
...+|...+..+... .....+++.... ...++|+|++++. +|.+++..... .+......++.+++..++
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHHHH
Confidence 467788777666422 244455555432 2347999999874 78888876332 455667889999999999
Q ss_pred HHHhCCCCCceecCCCCCCEEECCCC---cEEEeecCCccc
Q 013238 238 YLHDHCDPKIIHRDVKAANILLDEEF---EAVVGDFGLAKL 275 (447)
Q Consensus 238 yLH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgl~~~ 275 (447)
-||.. ||+|+|+++.|||++.++ .+.++||+-++.
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999 999999999999999887 899999997764
No 454
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.60 E-value=3.1e-07 Score=92.11 Aligned_cols=142 Identities=19% Similarity=0.217 Sum_probs=91.5
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccch---------------------------------------HHHHHH
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG---------------------------------------ELQFQT 168 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---------------------------------------~~~~~~ 168 (447)
+-|+.++-|.||+|++.+|+.||||+.+....+.- +..+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 56889999999999999999999999865421100 011223
Q ss_pred HHHHHHhc----CCCceeeEeeeeec-CCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHH-HHHHHhC
Q 013238 169 EVEMISMA----VHRNLLRLRGFCMT-PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG-LAYLHDH 242 (447)
Q Consensus 169 e~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~-l~yLH~~ 242 (447)
|...+.++ ....-+.+=.++.+ .....++|||+.|-.+.+....... .++.. .++..++++ +.-+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~---g~d~k---~ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA---GIDRK---ELAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc---CCCHH---HHHHHHHHHHHHHHHhc
Confidence 33333332 22222333333332 4677999999999888887432221 14433 333333332 2223334
Q ss_pred CCCCceecCCCCCCEEECCCCcEEEeecCCccccCC
Q 013238 243 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 243 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 278 (447)
|+.|.|..|.||+++.+|++.+.|||+...++.
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999876653
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.59 E-value=1.3e-06 Score=76.81 Aligned_cols=138 Identities=20% Similarity=0.165 Sum_probs=99.9
Q ss_pred eeecCCeEEEEEEECCCcEEEEEEeccccc-----cchHHHHHHHHHHHHhcCCCc--eeeEeeeee-c--C--CcceEE
Q 013238 130 LGRGGFGKVYKGRLTDGSLVAVKRLKEERT-----QGGELQFQTEVEMISMAVHRN--LLRLRGFCM-T--P--TERLLV 197 (447)
Q Consensus 130 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~-~--~--~~~~lv 197 (447)
-|+|+-+-|++..+. |..+-+|+-..... +.....|.+|+..+..+...+ +.++. ++. . . -..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 456888889998775 45788888752211 334567999999988875333 44444 222 1 1 235789
Q ss_pred EecccC-CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCc--EEEeecCCcc
Q 013238 198 YPFMVN-GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE--AVVGDFGLAK 274 (447)
Q Consensus 198 ~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgl~~ 274 (447)
+|-+.+ -+|.+++..... .+.+...+..++.+++..++-||+. |+.|+|+.+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997753 578888755332 2356777889999999999999999 9999999999999986667 9999998665
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.51 E-value=1.9e-06 Score=76.87 Aligned_cols=153 Identities=20% Similarity=0.228 Sum_probs=97.5
Q ss_pred CHHHHHHHhhCCCCCC---eeeecCCeEEEEEEECCCcEEEEEEeccccccc------------------hHHH-----H
Q 013238 113 SLRELQVATDNFSNRN---ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG------------------GELQ-----F 166 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~---~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------~~~~-----~ 166 (447)
++..+.....+..+.. .|++|.-..||+|...++..+|||+++.....- .... .
T Consensus 36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~ 115 (268)
T COG1718 36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA 115 (268)
T ss_pred HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence 3444444444444444 466777888999998889999999986432110 0011 2
Q ss_pred HHHHHHHHhcC--CCceeeEeeeeecCCcceEEEecccCC-cchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 013238 167 QTEVEMISMAV--HRNLLRLRGFCMTPTERLLVYPFMVNG-SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 243 (447)
Q Consensus 167 ~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~ 243 (447)
..|+..|.++. +-.+.+.+++ ....+||||+... .-.-.|... ++.......+..++++.+.-|-..+
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~----~~nVLvMEfIg~~g~pAP~LkDv-----~~e~~e~~~~~~~~v~~~~~l~~~a 186 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAF----RNNVLVMEFIGDDGLPAPRLKDV-----PLELEEAEGLYEDVVEYMRRLYKEA 186 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceee----cCCeEEEEeccCCCCCCCCcccC-----CcCchhHHHHHHHHHHHHHHHHHhc
Confidence 34566665553 2333333433 3457999999553 112222221 1333356677778888888887633
Q ss_pred CCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 244 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
++||+||+.-|||+. ++.+.|+|||-+....
T Consensus 187 --~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 187 --GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred --CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999999999999999 7899999999887544
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.45 E-value=3.4e-06 Score=76.45 Aligned_cols=139 Identities=13% Similarity=0.127 Sum_probs=83.4
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCc--eeeEeeeeecCCcceEEEecccCCc
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN--LLRLRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gs 205 (447)
..||+|..+.||+. .|..+++|...... ......+|.+++..+..-. +.+.+++....+...++||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 46899999999984 24567788876433 2334678898888775433 4566777766667789999998863
Q ss_pred -chhhh---------------------hhcCCCCCCCCHHHHH-HHHH----------HHHH-HHHHHHhC-CCCCceec
Q 013238 206 -VASCL---------------------RERGQSQPPLNWSVRK-QIAL----------GAAR-GLAYLHDH-CDPKIIHR 250 (447)
Q Consensus 206 -L~~~l---------------------~~~~~~~~~l~~~~~~-~i~~----------~i~~-~l~yLH~~-~~~~ivH~ 250 (447)
+...+ +...... ....... .+.. .+.. ...+|... ..+.++|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg 158 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT--STFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG 158 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--CcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence 21111 1110011 1111110 0000 0111 12223221 13367999
Q ss_pred CCCCCCEEECCCCcEEEeecCCccc
Q 013238 251 DVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 251 dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
|+.|.||++++++ +.++||+.+..
T Consensus 159 D~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 159 DFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCCcEEEcCCC-cEEEechhcCc
Confidence 9999999999988 99999998753
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.36 E-value=7.6e-06 Score=72.29 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=89.5
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHH--------HHHHHHHHHHhcCCCc---eeeEeee
Q 013238 119 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL--------QFQTEVEMISMAVHRN---LLRLRGF 187 (447)
Q Consensus 119 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~--------~~~~e~~~l~~l~h~n---iv~l~~~ 187 (447)
+...+|...+++-......|.+-.. +|..+++|..+......... ...+.+..+.+++... ...++.+
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 4456777777787777777777666 46889999886543221110 1223344333333222 2222222
Q ss_pred ee-----cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCC
Q 013238 188 CM-----TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE 262 (447)
Q Consensus 188 ~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~ 262 (447)
.. -....+++|||++|..|.++.. ++. .++..+++++.-||.. |++|+|..|.|++++++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~ 171 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN 171 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC
Confidence 21 1234568999999988776642 222 2445667889999999 99999999999999966
Q ss_pred CcEEEeecCCcc
Q 013238 263 FEAVVGDFGLAK 274 (447)
Q Consensus 263 ~~~kl~Dfgl~~ 274 (447)
+ +++.||+..+
T Consensus 172 ~-i~iID~~~k~ 182 (229)
T PF06176_consen 172 G-IRIIDTQGKR 182 (229)
T ss_pred c-EEEEECcccc
Confidence 4 9999998765
No 459
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.30 E-value=1.9e-07 Score=92.72 Aligned_cols=181 Identities=21% Similarity=0.159 Sum_probs=128.7
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCc-eeeEeeeeecCCcceEEEecccCC-c
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN-LLRLRGFCMTPTERLLVYPFMVNG-S 205 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g-s 205 (447)
+-+++|+++++++.+....+....+.+... ....-++++|.+.+||| .+..++-+..+...++.++++.++ +
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 347889999999887654444556655433 23456789999999999 666677666777888999999776 2
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceee
Q 013238 206 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 285 (447)
Q Consensus 206 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 285 (447)
-..-... ....+.......+...-+++++|||+. .=+|+| ||+..+ +..+.+||+....+.... ...
T Consensus 322 ~~~~~~~---se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~ 388 (829)
T KOG0576|consen 322 SALEMTV---SEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPR 388 (829)
T ss_pred ccccCCh---hhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc--ccc
Confidence 2111111 111133333444555567889999987 558888 777766 578999999987665443 233
Q ss_pred ccccccCccccccccCCCCCchhhhHHHHHHHHHHHhCCCCc
Q 013238 286 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 327 (447)
Q Consensus 286 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg~~p~ 327 (447)
...+++.|+|||+.....+..+.|+|++|.-..+|.-|-.|-
T Consensus 389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 455899999999999999999999999998777777776664
No 460
>PLN02876 acyl-CoA dehydrogenase
Probab=98.21 E-value=2.4e-05 Score=84.56 Aligned_cols=150 Identities=12% Similarity=0.197 Sum_probs=92.3
Q ss_pred CCeeeecCCeEEEEEEECCC---cEEEEEEeccccccchHHHHHHHHHHHHhcC-CCce--eeEeeeeecC---CcceEE
Q 013238 127 RNILGRGGFGKVYKGRLTDG---SLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNL--LRLRGFCMTP---TERLLV 197 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv 197 (447)
.+.++.|.++.+|+....++ ..+++|+............+.+|.++++.+. |.++ .+++.+|.+. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 35688999999999887653 3677787654332223346889999998885 6654 7778887664 467899
Q ss_pred EecccCCcchhh-----------------------hhhcCCC-------CCCCCH--HHHHHHH---------------H
Q 013238 198 YPFMVNGSVASC-----------------------LRERGQS-------QPPLNW--SVRKQIA---------------L 230 (447)
Q Consensus 198 ~e~~~~gsL~~~-----------------------l~~~~~~-------~~~l~~--~~~~~i~---------------~ 230 (447)
|||++|..+.+. |+..... ..+..+ ..+..+. .
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 999987653321 1111100 011111 1111111 1
Q ss_pred HHHHHHHHHHhCCC--------CCceecCCCCCCEEECC-CCc-EEEeecCCcccc
Q 013238 231 GAARGLAYLHDHCD--------PKIIHRDVKAANILLDE-EFE-AVVGDFGLAKLM 276 (447)
Q Consensus 231 ~i~~~l~yLH~~~~--------~~ivH~dlk~~Nill~~-~~~-~kl~Dfgl~~~~ 276 (447)
.+...+.+|..+.. +.++|+|+++.||+++. ++. .-|.||+++..-
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 13344567754322 35999999999999985 334 569999987654
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.19 E-value=1.2e-05 Score=80.51 Aligned_cols=141 Identities=21% Similarity=0.237 Sum_probs=89.0
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccc------------------------------------hHHHHHHHHH
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG------------------------------------GELQFQTEVE 171 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~e~~ 171 (447)
+-||.-+.|.||+|++++|+.||||+-+..-... .+.+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 5689999999999999999999999876432111 0112333443
Q ss_pred HH----HhcCCCc---eeeEeeeeec-CCcceEEEecccCCcchhhh--hhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013238 172 MI----SMAVHRN---LLRLRGFCMT-PTERLLVYPFMVNGSVASCL--RERGQSQPPLNWSVRKQIALGAARGLAYLHD 241 (447)
Q Consensus 172 ~l----~~l~h~n---iv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~ 241 (447)
.. ..+.|-+ -|.+=.++.+ .....|+||||+|..+.+.- ...+ ++...+.. .+.++ |++.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g-----i~~~~i~~---~l~~~--~~~q 316 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG-----ISPHDILN---KLVEA--YLEQ 316 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC-----CCHHHHHH---HHHHH--HHHH
Confidence 32 2233444 1222223322 35679999999998887653 3332 44444333 33332 2222
Q ss_pred CCCCCceecCCCCCCEEECC----CCcEEEeecCCccccCC
Q 013238 242 HCDPKIIHRDVKAANILLDE----EFEAVVGDFGLAKLMDY 278 (447)
Q Consensus 242 ~~~~~ivH~dlk~~Nill~~----~~~~kl~Dfgl~~~~~~ 278 (447)
-...|++|+|-.|.||+++. ++.+.+-|||+...+..
T Consensus 317 If~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 317 IFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 12228999999999999984 67899999999876543
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.19 E-value=1.4e-05 Score=72.75 Aligned_cols=143 Identities=17% Similarity=0.181 Sum_probs=81.7
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCC--ceeeEeeeeec---CCcceEEEeccc
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR--NLLRLRGFCMT---PTERLLVYPFMV 202 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~---~~~~~lv~e~~~ 202 (447)
+.|+.|..+.||+....+ ..+++|..... .....+..|..++..+... .+.+++.++.. ....+++|++++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 568999999999999877 68999987554 2334567788887776533 24556654432 234689999999
Q ss_pred CCcchh----------------hh---hhcCCCCCCCCHHHH---------HHH------------HHHHHH-HHHHHHh
Q 013238 203 NGSVAS----------------CL---RERGQSQPPLNWSVR---------KQI------------ALGAAR-GLAYLHD 241 (447)
Q Consensus 203 ~gsL~~----------------~l---~~~~~~~~~l~~~~~---------~~i------------~~~i~~-~l~yLH~ 241 (447)
+..+.. .+ +.......+...... ... ...+.+ .+..++.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 887776 11 111111111111110 000 111222 2333332
Q ss_pred C----CCCCceecCCCCCCEEEC-CCCcEEEeecCCcc
Q 013238 242 H----CDPKIIHRDVKAANILLD-EEFEAVVGDFGLAK 274 (447)
Q Consensus 242 ~----~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~ 274 (447)
. ....++|+|+.+.||+++ +++.+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1 234799999999999999 66677899998775
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.18 E-value=2.2e-05 Score=72.22 Aligned_cols=140 Identities=16% Similarity=0.083 Sum_probs=82.6
Q ss_pred eeecCC-eEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcC-CCceeeEeeeeecCCcceEEEecccCCcch
Q 013238 130 LGRGGF-GKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFMVNGSVA 207 (447)
Q Consensus 130 lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 207 (447)
|..|.. ..||+.... +..+.+|+..... ...+.+|++++..+. +--+.+++++....+..++||++++|.+|.
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 444544 788998764 4678888875432 224567888777663 334556777766666789999999987766
Q ss_pred hhh-------------------hhcCCCCCCCCHH--HHHHHHH--------------------HHHHHHHHHHhC----
Q 013238 208 SCL-------------------RERGQSQPPLNWS--VRKQIAL--------------------GAARGLAYLHDH---- 242 (447)
Q Consensus 208 ~~l-------------------~~~~~~~~~l~~~--~~~~i~~--------------------~i~~~l~yLH~~---- 242 (447)
... +.......++... ....... .+...+..|-..
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 432 1110001111100 0000000 011112222111
Q ss_pred CCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 243 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 243 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
..+.++|+|+.|.|||+++++.+.|+||+.+.
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 23469999999999999998778899999775
No 464
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.10 E-value=2e-05 Score=69.01 Aligned_cols=105 Identities=19% Similarity=0.174 Sum_probs=81.7
Q ss_pred HHHHHHHHhcCC-CceeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 013238 167 QTEVEMISMAVH-RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 245 (447)
Q Consensus 167 ~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~ 245 (447)
..|.-++..+++ +++.+++|+| ..+++.||...+++...-... ...-..+|..+.+|+.++++.+.+|++....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l-~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPL-SQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCcccccccccc-ccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 457778888876 6899999998 347899999877665321000 0011268999999999999999999985444
Q ss_pred CceecCCCCCCEEECCCCcEEEeecCCcccc
Q 013238 246 KIIHRDVKAANILLDEEFEAVVGDFGLAKLM 276 (447)
Q Consensus 246 ~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 276 (447)
.+.-.|++++|+-+++++++|++|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6788999999999999999999999876543
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.02 E-value=5.1e-05 Score=64.21 Aligned_cols=127 Identities=15% Similarity=0.191 Sum_probs=87.3
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceee-EeeeeecCCcceEEEecccCCc
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR-LRGFCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~~~~lv~e~~~~gs 205 (447)
.+.|++|.+|.||++.+. |..+|+|+-+.+ .....++.|.+++..+.-.++.+ ++.| +..++.|||..|-.
T Consensus 27 ~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d---s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~ 98 (201)
T COG2112 27 EKELAKGTTSVVYLGEWR-GGEVALKVRRRD---SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRP 98 (201)
T ss_pred hhhhhcccccEEEEeecc-CceEEEEEecCC---cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcc
Confidence 467999999999999997 457888876543 33457889999998887666544 4443 23345599998878
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCC-CCCEEECCCCcEEEeecCCccc
Q 013238 206 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVK-AANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 206 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk-~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
|.++-... +... +..+++.---|... ||-|+.|+ |...+|..++.+.|+||.-|..
T Consensus 99 L~~~~~~~-------~rk~----l~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 99 LGKLEIGG-------DRKH----LLRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhcc-------cHHH----HHHHHHHHHHHHHh---ccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 77665321 1222 33445554445555 99999997 5555555555999999998863
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.99 E-value=0.00023 Score=62.75 Aligned_cols=134 Identities=23% Similarity=0.333 Sum_probs=90.8
Q ss_pred CCCeeeecCCeEEEEEEECCCcEEEEEEecccc---------------ccchHHHHHHHHHHHHhcC------CCceeeE
Q 013238 126 NRNILGRGGFGKVYKGRLTDGSLVAVKRLKEER---------------TQGGELQFQTEVEMISMAV------HRNLLRL 184 (447)
Q Consensus 126 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~e~~~l~~l~------h~niv~l 184 (447)
....||+|+.-.||.- .++....||++.... ......+..+|+.....+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 3467999999999863 445567888887654 1112345666776655554 8889999
Q ss_pred eeeeecCCcceEEEecccC------CcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEE
Q 013238 185 RGFCMTPTERLLVYPFMVN------GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANIL 258 (447)
Q Consensus 185 ~~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nil 258 (447)
+|+..+....-+|+|...+ -+|.+++.... ++. ...+. +-+-..||-++ +|+.+|++|.||+
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-----~~~-~~~~~---L~~f~~~l~~~---~Iv~~dl~~~NIv 150 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-----LTE-ELRQA---LDEFKRYLLDH---HIVIRDLNPHNIV 150 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-----ccH-HHHHH---HHHHHHHHHHc---CCeecCCCcccEE
Confidence 9999998888999998643 25666664332 444 33333 33445778787 8999999999999
Q ss_pred ECCCC----cEEEee-cCCc
Q 013238 259 LDEEF----EAVVGD-FGLA 273 (447)
Q Consensus 259 l~~~~----~~kl~D-fgl~ 273 (447)
+.... .+.|+| ||..
T Consensus 151 ~~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 151 VQRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred EEecCCCceEEEEEeCCCCc
Confidence 95432 466776 4543
No 467
>PRK10593 hypothetical protein; Provisional
Probab=97.95 E-value=0.00027 Score=66.95 Aligned_cols=79 Identities=14% Similarity=0.068 Sum_probs=56.1
Q ss_pred CCCCCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC---CceeeEeeeeec---CCcceEE
Q 013238 124 FSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH---RNLLRLRGFCMT---PTERLLV 197 (447)
Q Consensus 124 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~---~~~~~lv 197 (447)
....+.||.|..+.||+....++ .+++|..+... ....+..|.+.++.+.- ..+.+++++|.. .+..++|
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSFS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC-CEEEEEecccc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 33446799999999999987655 46677753311 22367889998887753 357778887754 3568999
Q ss_pred EecccCCcc
Q 013238 198 YPFMVNGSV 206 (447)
Q Consensus 198 ~e~~~~gsL 206 (447)
||+++++++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999998765
No 468
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.87 E-value=7.5e-05 Score=79.59 Aligned_cols=197 Identities=20% Similarity=0.196 Sum_probs=136.2
Q ss_pred HHHHHHHHHhcCCCceeeEeeeeecCCc----ceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013238 166 FQTEVEMISMAVHRNLLRLRGFCMTPTE----RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 241 (447)
Q Consensus 166 ~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~ 241 (447)
...|++.+.++.|+|++.+++|...... ..+..+++..-++...+.... .++....+.+..++.+||+|+|+
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~----~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG----SIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc----ccCHHHHHHHHHHHhhhHHHHHH
Confidence 4457778889999999999998765432 234557888888887776543 37788888899999999999999
Q ss_pred CCCCCceecCCCCC---CEEECCCCcEEEe--ecCCccccCCCCCceeeccccccCccccccccCCCCCc--hhhhHHHH
Q 013238 242 HCDPKIIHRDVKAA---NILLDEEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE--KTDVFGYG 314 (447)
Q Consensus 242 ~~~~~ivH~dlk~~---Nill~~~~~~kl~--Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~sDvwSlG 314 (447)
. ...|.-+..+ +.-.+..+.+.++ ||+.++......... ...-+..|.|+|......+.. ..|+|.+|
T Consensus 305 ~---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg 379 (1351)
T KOG1035|consen 305 L---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKKSRLTDLWCLG 379 (1351)
T ss_pred h---ccceeEEecccccccccCccceeecchhhhcccccCCCcccch--hhcCccccccccccccccchhhhhhHHHHHH
Confidence 8 6666666555 5555677777777 888887654332221 122345678888776665544 47999999
Q ss_pred HHHHHHHhCCCCcccccccCCCcccHHHHHHHHhhccccccccccccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 013238 315 VMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEV 394 (447)
Q Consensus 315 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 394 (447)
..+..+..|..+-..... ...+++. .. ...+.+...+|+..++++|+++.++
T Consensus 380 ll~~~~~~~~~i~~~~~~--------------------~~~~l~~----~~----~~~~~d~~~~~~~~~~~~Rl~~~~l 431 (1351)
T KOG1035|consen 380 LLLLQLSQGEDISEKSAV--------------------PVSLLDV----LS----TSELLDALPKCLDEDSEERLSALEL 431 (1351)
T ss_pred HHHhhhhhcCcccccccc--------------------hhhhhcc----cc----chhhhhhhhhhcchhhhhccchhhh
Confidence 999999988765432110 0001111 00 0146777889999999999999999
Q ss_pred HHHHh
Q 013238 395 VRMLE 399 (447)
Q Consensus 395 l~~L~ 399 (447)
+...-
T Consensus 432 l~~~f 436 (1351)
T KOG1035|consen 432 LTHPF 436 (1351)
T ss_pred hhchh
Confidence 87544
No 469
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.81 E-value=0.00026 Score=64.69 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=26.7
Q ss_pred CCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 244 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
.+.++|+|+.+.||+++++...-|+||+.+..
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 34689999999999999776567999998753
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.78 E-value=0.00036 Score=63.69 Aligned_cols=142 Identities=15% Similarity=0.183 Sum_probs=80.5
Q ss_pred CeeeecCCeEEEEEEECC--CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCc-eeeEeeeeecCCcceEEEecccCC
Q 013238 128 NILGRGGFGKVYKGRLTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN-LLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+.|..|-...+|+....+ +..+++|........ .....+|+.++..+.... ..++++.+. ..++|||++|.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~ 77 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGR 77 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCC
Confidence 457788889999998764 678889977543211 112346787777774333 334444322 24899999887
Q ss_pred cchhh-----------------hhhcCCCC-------CCC-CHHHHHHHHH----------------------HHHHHHH
Q 013238 205 SVASC-----------------LRERGQSQ-------PPL-NWSVRKQIAL----------------------GAARGLA 237 (447)
Q Consensus 205 sL~~~-----------------l~~~~~~~-------~~l-~~~~~~~i~~----------------------~i~~~l~ 237 (447)
++... ++...... ... .+..+..+.. .+...+.
T Consensus 78 ~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 157 (235)
T cd05157 78 TLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEIS 157 (235)
T ss_pred cCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHH
Confidence 65321 11111110 011 1222212211 1111111
Q ss_pred HH----HhC-CCCCceecCCCCCCEEECC-CCcEEEeecCCccc
Q 013238 238 YL----HDH-CDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKL 275 (447)
Q Consensus 238 yL----H~~-~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~ 275 (447)
.| ... ....++|+|+.+.|||+++ ++.+.++||..+..
T Consensus 158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 22 111 2337999999999999998 57899999988753
No 471
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.69 E-value=0.00085 Score=58.76 Aligned_cols=126 Identities=25% Similarity=0.334 Sum_probs=86.0
Q ss_pred hCCCCCCeeeecCC-eEEEEEEECCCcEEEEEEeccc---c-------cc----------chHHHHHHHHHHHHhcC---
Q 013238 122 DNFSNRNILGRGGF-GKVYKGRLTDGSLVAVKRLKEE---R-------TQ----------GGELQFQTEVEMISMAV--- 177 (447)
Q Consensus 122 ~~~~~~~~lg~G~~-g~V~~~~~~~~~~vavK~~~~~---~-------~~----------~~~~~~~~e~~~l~~l~--- 177 (447)
.+++.++.||.|.- |.||+++.. |+.+|+|.+..- . .. .....|..|.+...+++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 78889999999999 999999985 779999994210 0 00 00123777888777665
Q ss_pred CCce--eeEeeeeecCC------------------cceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 013238 178 HRNL--LRLRGFCMTPT------------------ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 237 (447)
Q Consensus 178 h~ni--v~l~~~~~~~~------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~ 237 (447)
+.++ ++.+||..-.. ...+|.||.+... .+.... +.+|.+-|.
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~~----~~~~~~dl~ 178 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIRD----IPQMLRDLK 178 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchhH----HHHHHHHHH
Confidence 4455 88888863220 1235666654432 123333 344556678
Q ss_pred HHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCc
Q 013238 238 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 273 (447)
Q Consensus 238 yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 273 (447)
.+|.. ||+-+|+++.|.. .-+|+|||.+
T Consensus 179 ~~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 89998 9999999999987 3489999864
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.67 E-value=0.00046 Score=63.89 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=78.1
Q ss_pred eeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCce-eeEeeeeecCCcceEEEecccCCcchh
Q 013238 130 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVYPFMVNGSVAS 208 (447)
Q Consensus 130 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gsL~~ 208 (447)
+..|-.+.+|+... ++..+++|........- .....+|.++++.+....+ .+++..+ ..++||||++|..+..
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKAL-GVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITL 77 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCcccccc-cCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCccccc
Confidence 55688889999874 46678888764332111 0134678888877754333 2334332 2479999998876542
Q ss_pred h-----------------hhhcCCCCCCCCHHH-HHHHHHHH---------HHHHHHHHhC-----CCCCceecCCCCCC
Q 013238 209 C-----------------LRERGQSQPPLNWSV-RKQIALGA---------ARGLAYLHDH-----CDPKIIHRDVKAAN 256 (447)
Q Consensus 209 ~-----------------l~~~~~~~~~l~~~~-~~~i~~~i---------~~~l~yLH~~-----~~~~ivH~dlk~~N 256 (447)
. ++.......+++... +..+..++ ...+..+-.. ....++|+|+.+.|
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 1 111111111222221 11111111 1112222211 12368999999999
Q ss_pred EEECCCCcEEEeecCCccc
Q 013238 257 ILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 257 ill~~~~~~kl~Dfgl~~~ 275 (447)
|++++++ +.|+||..+..
T Consensus 158 il~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 158 LVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEEeCCC-CEEEeccccCc
Confidence 9999877 78999998764
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.60 E-value=0.001 Score=65.06 Aligned_cols=75 Identities=15% Similarity=0.111 Sum_probs=51.7
Q ss_pred CeeeecCCeEEEEEEECCC-cEEEEEEecccc------ccchHHHHHHHHHHHHhcC---CCceeeEeeeeecCCcceEE
Q 013238 128 NILGRGGFGKVYKGRLTDG-SLVAVKRLKEER------TQGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~------~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv 197 (447)
+.||.|.+..||++...+| +.++||.-.... ..-...+...|.+.|..+. -.++.+++.+ +....++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 4689999999999998876 489999854221 1122335666777776642 3456667766 44667899
Q ss_pred EecccCC
Q 013238 198 YPFMVNG 204 (447)
Q Consensus 198 ~e~~~~g 204 (447)
||++++.
T Consensus 110 ME~L~~~ 116 (401)
T PRK09550 110 MEDLSDH 116 (401)
T ss_pred EecCCCc
Confidence 9999764
No 474
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.57 E-value=0.00067 Score=64.28 Aligned_cols=143 Identities=16% Similarity=0.092 Sum_probs=83.1
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCc--eeeEeee------eecCCcceEEE
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN--LLRLRGF------CMTPTERLLVY 198 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~ 198 (447)
.+.|..|....+|+....+ ..+++|+... . ....+..|++++..+.+.. +.+++.. ....+..++++
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~-~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~ 93 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK-V---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV 93 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCC-C---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence 3457778888999987654 4688898754 1 1234566777776664332 3344331 12234568999
Q ss_pred ecccCCcchh----h----------hhhcCCC-C------CCCCHHHHH----------HHHHHHHHHHHHHHh----CC
Q 013238 199 PFMVNGSVAS----C----------LRERGQS-Q------PPLNWSVRK----------QIALGAARGLAYLHD----HC 243 (447)
Q Consensus 199 e~~~~gsL~~----~----------l~~~~~~-~------~~l~~~~~~----------~i~~~i~~~l~yLH~----~~ 243 (447)
+|++|..+.. . ++..... . ....|.... .....+..++.++.. ..
T Consensus 94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 173 (296)
T cd05153 94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL 173 (296)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 9998876532 0 1111000 0 011222111 011123344555543 12
Q ss_pred CCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 244 DPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
..+++|+|+.|.||++++++.+.|.||+.+.
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 3479999999999999998777899999775
No 475
>PRK05231 homoserine kinase; Provisional
Probab=97.46 E-value=0.003 Score=60.55 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=26.7
Q ss_pred CCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 244 DPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
..+++|+|+.+.||+++.+...-|+||+.+.
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 4489999999999999976556899999875
No 476
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.41 E-value=0.00024 Score=65.92 Aligned_cols=135 Identities=17% Similarity=0.136 Sum_probs=91.7
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCcEEEEEEecccccc---------------------chHHHHHHHHHHHHhcCC-Cc
Q 013238 123 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ---------------------GGELQFQTEVEMISMAVH-RN 180 (447)
Q Consensus 123 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~e~~~l~~l~h-~n 180 (447)
-+..++.||-|.-+.+|.+.+.+|++.++|.-+..++. -.+....+|+..|+.+.. ..
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 35677899999999999999999999999865422110 012235567777776642 22
Q ss_pred -eeeEeeeeecCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEE
Q 013238 181 -LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 259 (447)
Q Consensus 181 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill 259 (447)
+.+.++ .+..++|||++.+-.|...-+-. +... +...+..-+.-|-.+ |+||+|..--||++
T Consensus 173 pVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v~-------d~~~---ly~~lm~~Iv~la~~---GlIHgDFNEFNimv 235 (465)
T KOG2268|consen 173 PVPKPID----HNRHCVVMELVDGYPLRQVRHVE-------DPPT---LYDDLMGLIVRLANH---GLIHGDFNEFNIMV 235 (465)
T ss_pred CCCCccc----ccceeeHHHhhcccceeeeeecC-------ChHH---HHHHHHHHHHHHHHc---CceecccchheeEE
Confidence 222332 34568999999887766543221 2222 333333445567777 99999999999999
Q ss_pred CCCCcEEEeecCCcc
Q 013238 260 DEEFEAVVGDFGLAK 274 (447)
Q Consensus 260 ~~~~~~kl~Dfgl~~ 274 (447)
++++.++++||--..
T Consensus 236 ~dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 236 KDDDKIVVIDFPQMV 250 (465)
T ss_pred ecCCCEEEeechHhh
Confidence 999999999997554
No 477
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.39 E-value=0.0023 Score=60.68 Aligned_cols=142 Identities=18% Similarity=0.236 Sum_probs=95.7
Q ss_pred CCCeeeecCCeEEEEEEECCCcEEEEEEecccc--------------------ccchHHH-----HHHHHHHHHhcCCCc
Q 013238 126 NRNILGRGGFGKVYKGRLTDGSLVAVKRLKEER--------------------TQGGELQ-----FQTEVEMISMAVHRN 180 (447)
Q Consensus 126 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------------------~~~~~~~-----~~~e~~~l~~l~h~n 180 (447)
+..+|..|.-..||.+.-.+|..+|||+++... +...... ...|+..|.+++...
T Consensus 148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG 227 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG 227 (520)
T ss_pred cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 346788899999999999999999999985321 0111111 345677777775444
Q ss_pred eeeEeeeeecCCcceEEEecccCCcc-hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEE
Q 013238 181 LLRLRGFCMTPTERLLVYPFMVNGSV-ASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 259 (447)
Q Consensus 181 iv~l~~~~~~~~~~~lv~e~~~~gsL-~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill 259 (447)
|...--+.. ....|||+|+..... .-.|.. -.++...+..+-.+++.-|.-|-..| ++||.||+--|+|+
T Consensus 228 IP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd-----~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly 298 (520)
T KOG2270|consen 228 IPCPEPILL--KNHVLVMEFLGRDGWAAPKLKD-----ASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY 298 (520)
T ss_pred CCCCCceee--ecceEeeeeccCCCCcCccccc-----ccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE
Confidence 322111111 234799999953221 112222 23666777788888888899998888 99999999999999
Q ss_pred CCCCcEEEeecCCccccC
Q 013238 260 DEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 260 ~~~~~~kl~Dfgl~~~~~ 277 (447)
.+ |.+.|+|.+-+...+
T Consensus 299 hd-G~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 299 HD-GKLYIIDVSQSVEHD 315 (520)
T ss_pred EC-CEEEEEEccccccCC
Confidence 86 589999998876443
No 478
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.38 E-value=0.0014 Score=62.28 Aligned_cols=141 Identities=23% Similarity=0.244 Sum_probs=81.2
Q ss_pred CeeeecCCeEEEEEEECC-------CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCce-eeEeeeeecCCcceEEEe
Q 013238 128 NILGRGGFGKVYKGRLTD-------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVYP 199 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e 199 (447)
+.+..|-...+|+....+ ++.+++|+...... ......+|.+++..+....+ .++++++. ..+|++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e 77 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE--LLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEE 77 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc--ceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhh
Confidence 346677788999988654 47889998754321 11245677777776653333 33444442 246899
Q ss_pred cccCCcchhh-----------------hhhcCCCC-------CCCCHHHHHHH--------------------------H
Q 013238 200 FMVNGSVASC-----------------LRERGQSQ-------PPLNWSVRKQI--------------------------A 229 (447)
Q Consensus 200 ~~~~gsL~~~-----------------l~~~~~~~-------~~l~~~~~~~i--------------------------~ 229 (447)
|++|..+... +|...... .+.-+..+..+ .
T Consensus 78 ~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T cd05156 78 FIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFL 157 (302)
T ss_pred eeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHH
Confidence 9988766431 11111110 00111111111 1
Q ss_pred HHHHHHHHHHHh------CCCCCceecCCCCCCEEECCC----CcEEEeecCCcc
Q 013238 230 LGAARGLAYLHD------HCDPKIIHRDVKAANILLDEE----FEAVVGDFGLAK 274 (447)
Q Consensus 230 ~~i~~~l~yLH~------~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~~ 274 (447)
..+...+.+|.. .....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 158 EDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 122222334432 234578999999999999985 889999999875
No 479
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.32 E-value=5.3e-05 Score=82.61 Aligned_cols=160 Identities=13% Similarity=0.014 Sum_probs=114.2
Q ss_pred HHHHHHHhcCCCceeeEeeeee--cCCcceEEEecccCCcchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q 013238 168 TEVEMISMAVHRNLLRLRGFCM--TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC-- 243 (447)
Q Consensus 168 ~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~-- 243 (447)
.|.+-++...|+++.....=.. ...+.+..++|+.+|.+.+.+-......++++..-+.....+.+....-.|+..
T Consensus 1278 ~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnl 1357 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNL 1357 (2724)
T ss_pred hhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccC
Confidence 3444455667888765443222 234668999999999999998776555555555544443333344555555432
Q ss_pred CCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeeccccccCccccccccCCCCCchhhhHHHHHHHHHHHhC
Q 013238 244 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 323 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltg 323 (447)
..-.+|+++|+-|.+|+.+..+|++++|+.+.... .....+...+++.|++|+....-.++.++|+|..|+.+|+..-|
T Consensus 1358 g~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp-~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~ 1436 (2724)
T KOG1826|consen 1358 GNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP-VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDG 1436 (2724)
T ss_pred CccchhhhhhhhccceecCCcccccccccccccCc-hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcc
Confidence 22468999999999999999999999999984332 22233444578889999998888899999999999999999999
Q ss_pred CCCcc
Q 013238 324 QRAFD 328 (447)
Q Consensus 324 ~~p~~ 328 (447)
..+|-
T Consensus 1437 n~~fi 1441 (2724)
T KOG1826|consen 1437 NAYFI 1441 (2724)
T ss_pred cHHHH
Confidence 88873
No 480
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.30 E-value=0.011 Score=56.27 Aligned_cols=144 Identities=15% Similarity=0.130 Sum_probs=80.0
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCc--eeeEeeee------ecCCcceEEE
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN--LLRLRGFC------MTPTERLLVY 198 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~------~~~~~~~lv~ 198 (447)
.+.++.|....+|+....+| .+++|+...... ...+..|.+++..+.... +.+++... ...+..++++
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRVK---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCCC---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 35577787789999876555 577887754321 223445566665553222 33333321 1234568999
Q ss_pred ecccCCcchhh--------------hhhcCCCC-CC-------CCHHHHH------------HHHHHHHHHHHHHHh---
Q 013238 199 PFMVNGSVASC--------------LRERGQSQ-PP-------LNWSVRK------------QIALGAARGLAYLHD--- 241 (447)
Q Consensus 199 e~~~~gsL~~~--------------l~~~~~~~-~~-------l~~~~~~------------~i~~~i~~~l~yLH~--- 241 (447)
+|++|..+... ++...... .+ -.|.... .....+.+.++++..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 99988554211 11111100 00 0111100 001123334555542
Q ss_pred -CCCCCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 242 -HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 242 -~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
....+++|+|+.+.||++++++...|.||+.+.
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 234589999999999999998877899999875
No 481
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.27 E-value=0.0048 Score=58.28 Aligned_cols=148 Identities=19% Similarity=0.216 Sum_probs=82.5
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEecc-ccccchHHHHHHHHHHHHhcCCC--ceeeEeeeeecCC--cceEEEeccc
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISMAVHR--NLLRLRGFCMTPT--ERLLVYPFMV 202 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~--~~~lv~e~~~ 202 (447)
+.+..|....+|..... ++.++++ ... ...........+|+++++.+.-- -+...+++|.+.. ..+.||+|++
T Consensus 31 ~~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~ve 108 (321)
T COG3173 31 EEISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVE 108 (321)
T ss_pred eeccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEec
Confidence 33444544555555544 6778888 331 22333344567788888776421 2333466666554 6699999998
Q ss_pred CCcchhhhhhcCCC--------------------------C-------CC-CCHHHHHHHHH--------HHHHHHHHHH
Q 013238 203 NGSVASCLRERGQS--------------------------Q-------PP-LNWSVRKQIAL--------GAARGLAYLH 240 (447)
Q Consensus 203 ~gsL~~~l~~~~~~--------------------------~-------~~-l~~~~~~~i~~--------~i~~~l~yLH 240 (447)
|..+.+.+...... . .+ ..|...+..+. ....-..||+
T Consensus 109 Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~ 188 (321)
T COG3173 109 GEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLE 188 (321)
T ss_pred ceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHH
Confidence 85443332211000 0 00 00111110000 0112234444
Q ss_pred hCC-----CCCceecCCCCCCEEECCCCcEEEeecCCccccC
Q 013238 241 DHC-----DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 277 (447)
Q Consensus 241 ~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 277 (447)
.+. .+.++|+|+.+.|++++.++-+=+.||+++..-+
T Consensus 189 ~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 189 ANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred hcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 332 2479999999999999999889999999987644
No 482
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.15 E-value=0.0053 Score=57.53 Aligned_cols=73 Identities=21% Similarity=0.269 Sum_probs=46.2
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcC---CCceeeEeeeeecCCcceEEEecccC
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLLVYPFMVN 203 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 203 (447)
.+.++.|....+|+.. .+++.+.||.-... ....|..|.+-|+.+. --.+.+++++....+..+++|||++.
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~----~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~ 96 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNSES----GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM 96 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEEGG----GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecChh----hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence 3568889999999987 56788999987522 2235778888777773 45577788888777778999999977
Q ss_pred C
Q 013238 204 G 204 (447)
Q Consensus 204 g 204 (447)
+
T Consensus 97 ~ 97 (288)
T PF03881_consen 97 G 97 (288)
T ss_dssp -
T ss_pred C
Confidence 6
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.89 E-value=0.013 Score=54.71 Aligned_cols=31 Identities=29% Similarity=0.482 Sum_probs=26.0
Q ss_pred CCceecCCCCCCEEECCCCc-EEEeecCCccc
Q 013238 245 PKIIHRDVKAANILLDEEFE-AVVGDFGLAKL 275 (447)
Q Consensus 245 ~~ivH~dlk~~Nill~~~~~-~kl~Dfgl~~~ 275 (447)
+.++|+|+++.||++++++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 46899999999999997555 46999998864
No 484
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.50 E-value=0.037 Score=53.22 Aligned_cols=73 Identities=14% Similarity=0.029 Sum_probs=46.1
Q ss_pred eeeecCCeEEEEEEECCC-cEEEEEEeccc------cccchHHHHHHHHHHHHhcC--CC-ceeeEeeeeecCCcceEEE
Q 013238 129 ILGRGGFGKVYKGRLTDG-SLVAVKRLKEE------RTQGGELQFQTEVEMISMAV--HR-NLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~~-~~vavK~~~~~------~~~~~~~~~~~e~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~ 198 (447)
.||.|....||++...+| +.|+||.-... ..+-...+...|.+.|.... -| .+.+++.+ ++....++|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 479999999999998654 57999986422 11222334445666665542 23 34445543 556667999
Q ss_pred ecccC
Q 013238 199 PFMVN 203 (447)
Q Consensus 199 e~~~~ 203 (447)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 99854
No 485
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.48 E-value=0.069 Score=52.34 Aligned_cols=74 Identities=12% Similarity=0.033 Sum_probs=48.4
Q ss_pred CCeeeecCCeEEEEEEECCCcEEEEEEeccccc------cchHHHHHHHHHHHHhcC---CCceeeEeeeeecCCcceEE
Q 013238 127 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT------QGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLLV 197 (447)
Q Consensus 127 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv 197 (447)
.+.||.|....||+.... +..++||+-..... .....+-..|.+.|..+. ..++.+++.++. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 356899999999998875 45688998752211 112223334555555443 356777888775 557889
Q ss_pred EecccC
Q 013238 198 YPFMVN 203 (447)
Q Consensus 198 ~e~~~~ 203 (447)
||++++
T Consensus 114 ME~L~~ 119 (418)
T PLN02756 114 MRYLEP 119 (418)
T ss_pred EeecCC
Confidence 999976
No 486
>PLN02236 choline kinase
Probab=96.47 E-value=0.036 Score=53.69 Aligned_cols=140 Identities=16% Similarity=0.160 Sum_probs=78.5
Q ss_pred eeeecCCeEEEEEEECC-----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCcee-eEeeeeecCCcceEEEeccc
Q 013238 129 ILGRGGFGKVYKGRLTD-----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL-RLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 129 ~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~ 202 (447)
.|..|-...+|+....+ ++.|++|+...... . .....+|..++..+...++. ++++.+.. ..|.+|++
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~-~-~idR~~E~~~~~~l~~~gl~P~~~~~~~~----g~v~efi~ 116 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE-L-FFDRDDEIRTFECMSRHGQGPRLLGRFPN----GRVEEFIH 116 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC-e-eechHHHHHHHHHHHHcCCCCceEEEECC----ceEEEeeC
Confidence 45567888999987532 36788998755321 1 11235677777776544433 34454422 25899987
Q ss_pred CCcchhh-----------------hhhcCCCC--CCCCHHHHHHHHHH-----------------HHHHHHHHH----h-
Q 013238 203 NGSVASC-----------------LRERGQSQ--PPLNWSVRKQIALG-----------------AARGLAYLH----D- 241 (447)
Q Consensus 203 ~gsL~~~-----------------l~~~~~~~--~~l~~~~~~~i~~~-----------------i~~~l~yLH----~- 241 (447)
+.+|... +|...... .+..+..+..+..+ +...+..|. .
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 7665421 11111111 11223333333211 111122222 1
Q ss_pred CCCCCceecCCCCCCEEECC-CCcEEEeecCCcc
Q 013238 242 HCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAK 274 (447)
Q Consensus 242 ~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~ 274 (447)
.....++|+|+++.||++++ ++.+.++||..+.
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 12336899999999999986 4689999998875
No 487
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.34 E-value=0.01 Score=58.69 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhcCCCceeeEeeeeecCC-cceEEEecccCCcchhhhhhc
Q 013238 164 LQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLLVYPFMVNGSVASCLRER 213 (447)
Q Consensus 164 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~ 213 (447)
.++.-...+++.+.|+|+...+.+..... ...+|||++ +.+|.+.+..+
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~ 76 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG 76 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence 45667788999999999999988876543 357889998 66888888654
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.28 E-value=0.07 Score=50.82 Aligned_cols=29 Identities=34% Similarity=0.408 Sum_probs=25.4
Q ss_pred CCceecCCCCCCEEECCCCcEEEeecCCcc
Q 013238 245 PKIIHRDVKAANILLDEEFEAVVGDFGLAK 274 (447)
Q Consensus 245 ~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 274 (447)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 48999999999999998 678999998664
No 489
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.16 E-value=0.044 Score=52.77 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=77.8
Q ss_pred CeeeecCCeEEEEEEECC----CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCcee-eEeeeeecCCcceEEEeccc
Q 013238 128 NILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL-RLRGFCMTPTERLLVYPFMV 202 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~ 202 (447)
+.|..|-...+|+....+ +..|++|+...... ......+|..+++.+..-++- ++++++. . .+|.+|++
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~--~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~---G~i~~fi~ 93 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD--YVIDRERELQAIKYLSAAGFGAKLLGVFG-N---GMIQSFIN 93 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC--eEechHHHHHHHHHHHhcCCCCceeEEeC-C---cEeehhhc
Confidence 345567788899887543 23788888754322 112345677777777644443 4455442 2 25888987
Q ss_pred CCcchhh-----------------hhhcCCCC--CCCCHHHHHHHHHHH----------------------HHHHHHHHh
Q 013238 203 NGSVASC-----------------LRERGQSQ--PPLNWSVRKQIALGA----------------------ARGLAYLHD 241 (447)
Q Consensus 203 ~gsL~~~-----------------l~~~~~~~--~~l~~~~~~~i~~~i----------------------~~~l~yLH~ 241 (447)
+..|... +|...... .+-.|..+..+..++ ..-+..+..
T Consensus 94 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 173 (330)
T PLN02421 94 ARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKE 173 (330)
T ss_pred CCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHH
Confidence 7655310 11111110 111233332222221 111111111
Q ss_pred -----CCCCCceecCCCCCCEEECC-CCcEEEeecCCccc
Q 013238 242 -----HCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKL 275 (447)
Q Consensus 242 -----~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~ 275 (447)
.....++|+|+.+.||++++ ++.++++||..+..
T Consensus 174 ~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 174 ITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred HhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 11224799999999999975 57899999998753
No 490
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.13 E-value=0.033 Score=49.28 Aligned_cols=150 Identities=14% Similarity=0.138 Sum_probs=86.6
Q ss_pred CCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCceeeEeeeeecCCcceEEEecccCCcchhhhhhc
Q 013238 134 GFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRER 213 (447)
Q Consensus 134 ~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 213 (447)
+..+.-.++.+-|. ..+|++......-...-+..+..+++++. .|+++..- +....-++.|+|..-
T Consensus 74 gNsTl~~~kt~iG~-L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~--------- 139 (308)
T PF07387_consen 74 GNSTLLIGKTKIGP-LFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKI--------- 139 (308)
T ss_pred CceEEEEeccccch-hhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCc---------
Confidence 34444444443333 45666654433323345677888888763 46666521 223345888888331
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccccCCCCCceeeccccccCc
Q 013238 214 GQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 293 (447)
Q Consensus 214 ~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y 293 (447)
.....-.|..+ +.+|.-.|+. ..+.+|+|..|+||+-|..|.+||.|-+.-.. .+.-|
T Consensus 140 -------~i~~~N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~-------------~~V~~ 197 (308)
T PF07387_consen 140 -------KINFSNFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE-------------NQVNM 197 (308)
T ss_pred -------ccchhHHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh-------------heeeE
Confidence 11111222222 3667778864 34899999999999999999999999875421 01112
Q ss_pred cccccccCCCCCchhhhHHHHHHHHHHHh
Q 013238 294 IAPEYLSTGKSSEKTDVFGYGVMLLELIT 322 (447)
Q Consensus 294 ~aPE~~~~~~~~~~sDvwSlG~il~ellt 322 (447)
.--| -...+.++.+-+|=.-+++++.
T Consensus 198 vN~~---Y~~lT~~aE~~~fv~s~l~~v~ 223 (308)
T PF07387_consen 198 VNIE---YESLTQEAEVKVFVKSCLKLVE 223 (308)
T ss_pred Eeee---ccccChHHHHHHHHHHHHHHHH
Confidence 2211 1123566777777666666665
No 491
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.98 E-value=0.11 Score=46.39 Aligned_cols=75 Identities=13% Similarity=0.179 Sum_probs=50.3
Q ss_pred CeeeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhc---CCCceeeEeeeeecCCcceEEEecccCC
Q 013238 128 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMA---VHRNLLRLRGFCMTPTERLLVYPFMVNG 204 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~g 204 (447)
+.+..|.--..|+..+ +..++.||+-... ....|..|+.-|..+ +--++.+++.+..+.+..|+|+||++-+
T Consensus 22 ~~v~gG~inea~~v~d-g~~~~FvK~n~~~----~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~ 96 (286)
T COG3001 22 EEVSGGDINEAWRLRD-GTDPFFVKCNQRE----QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTG 96 (286)
T ss_pred cccCCccccceeEeec-CCcceEEEecchh----hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCC
Confidence 4455566666666655 3567888865322 123566777655544 4456777888888889999999999987
Q ss_pred cch
Q 013238 205 SVA 207 (447)
Q Consensus 205 sL~ 207 (447)
.+.
T Consensus 97 ~~d 99 (286)
T COG3001 97 PLD 99 (286)
T ss_pred CCC
Confidence 665
No 492
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.70 E-value=0.27 Score=47.06 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=78.5
Q ss_pred eeecCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcC---CCceee---Eeeeee--cCC--cceEEEe
Q 013238 130 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV---HRNLLR---LRGFCM--TPT--ERLLVYP 199 (447)
Q Consensus 130 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~---l~~~~~--~~~--~~~lv~e 199 (447)
|.+ .-..+|+....+|+. ++|+.... .. ..++..|++.+..+. .+-.++ +-|-.. -.. ..+.+++
T Consensus 34 l~s-~eN~~f~~~~~~g~~-iLki~~~~-~~--~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~ 108 (331)
T COG2334 34 LNS-EENSNFRVQTEDGRY-ILKIYRPG-WT--RAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE 108 (331)
T ss_pred ccc-ccCceEEEEecCCCe-EEEEecCC-CC--HHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence 444 556789988877766 88988765 22 234555666665553 121122 222111 123 5678999
Q ss_pred cccCCcchh-h--------------hhhcCCC----C----CCCCHHH----H---------HHHHHHHHHHHHHHHhCC
Q 013238 200 FMVNGSVAS-C--------------LRERGQS----Q----PPLNWSV----R---------KQIALGAARGLAYLHDHC 243 (447)
Q Consensus 200 ~~~~gsL~~-~--------------l~~~~~~----~----~~l~~~~----~---------~~i~~~i~~~l~yLH~~~ 243 (447)
|++|..+.. . |+..... . ....|.. . .....++...+..+.+..
T Consensus 109 ~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~ 188 (331)
T COG2334 109 YLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARL 188 (331)
T ss_pred ecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhc
Confidence 999887772 1 1111000 0 0123321 0 012233344444444332
Q ss_pred ----CCC---ceecCCCCCCEEECCCCc-EEEeecCCcc
Q 013238 244 ----DPK---IIHRDVKAANILLDEEFE-AVVGDFGLAK 274 (447)
Q Consensus 244 ----~~~---ivH~dlk~~Nill~~~~~-~kl~Dfgl~~ 274 (447)
... +||+|+.+.||+++.+.. +.+.||+.+.
T Consensus 189 ~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 189 PAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 223 899999999999999875 8899999875
No 493
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.59 E-value=0.32 Score=46.70 Aligned_cols=72 Identities=18% Similarity=0.124 Sum_probs=41.8
Q ss_pred cCCeEEEEEEECCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCC--ceeeEe---e--eeecCCcceEEEecccCCc
Q 013238 133 GGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR--NLLRLR---G--FCMTPTERLLVYPFMVNGS 205 (447)
Q Consensus 133 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~---~--~~~~~~~~~lv~e~~~~gs 205 (447)
+.-..||+....+|..+++|..+.... ....+..|++.+..+... .++... | +...++..+.++++++|..
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~~~--~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~ 113 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPERW--SDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA 113 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCcccC--CHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence 445789999887788899998764331 233455666666554311 122211 1 1122345678899987754
Q ss_pred c
Q 013238 206 V 206 (447)
Q Consensus 206 L 206 (447)
.
T Consensus 114 ~ 114 (325)
T PRK11768 114 P 114 (325)
T ss_pred C
Confidence 3
No 494
>PLN03150 hypothetical protein; Provisional
Probab=95.55 E-value=0.0096 Score=62.44 Aligned_cols=36 Identities=28% Similarity=0.551 Sum_probs=20.4
Q ss_pred CCeeeCCCCcccccCCCC-CCCCCCCccccccCCCCC
Q 013238 1 MNCRDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNN 36 (447)
Q Consensus 1 l~~~~ls~N~lsG~iP~~-~~~~~~~~~s~~~n~~~~ 36 (447)
|..||||+|+|+|.+|.. +.+..+..+.+.+|.+.+
T Consensus 468 L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g 504 (623)
T PLN03150 468 LEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504 (623)
T ss_pred CCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccc
Confidence 445666666666666653 445555555555555543
No 495
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.42 E-value=0.11 Score=50.81 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=47.1
Q ss_pred CeeeecCCeEEEEEEECC-CcEEEEEEeccc-----cccchHHHHHHHHHHHHhcC--CC-ceeeEeeeeecCCcceEEE
Q 013238 128 NILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-----RTQGGELQFQTEVEMISMAV--HR-NLLRLRGFCMTPTERLLVY 198 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~~e~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~ 198 (447)
+.||.|.-.-||++...+ ++.|+||.-... ...-...+..-|.+.|+... -| .+.+++.+ ++....+||
T Consensus 35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~vM 112 (409)
T PRK12396 35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCVM 112 (409)
T ss_pred eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHHH
Confidence 568999999999999753 567999976422 11222334555666666542 33 35556544 455667888
Q ss_pred ecccC
Q 013238 199 PFMVN 203 (447)
Q Consensus 199 e~~~~ 203 (447)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 88854
No 496
>PRK06148 hypothetical protein; Provisional
Probab=95.37 E-value=0.26 Score=54.72 Aligned_cols=32 Identities=34% Similarity=0.450 Sum_probs=26.7
Q ss_pred CCCceecCCCCCCEEECCCC--cEE-EeecCCccc
Q 013238 244 DPKIIHRDVKAANILLDEEF--EAV-VGDFGLAKL 275 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~--~~k-l~Dfgl~~~ 275 (447)
..++||+|+.+.|||++.++ ++. |+|||.+..
T Consensus 202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred CcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 44799999999999999875 555 999998753
No 497
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.22 E-value=0.07 Score=50.86 Aligned_cols=53 Identities=25% Similarity=0.255 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 220 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 220 l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
..+.+...++.+.+..+.-+..+. ..-|||+.-.||||+ +|++.|+||-+++.
T Consensus 318 ~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 318 DRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred ccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeeeeec
Confidence 467888888888888777777765 789999999999999 99999999999984
No 498
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.22 E-value=0.19 Score=47.87 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=28.3
Q ss_pred CCCceecCCCCCCEEECCCCcEEEeecCCccc
Q 013238 244 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 275 (447)
Q Consensus 244 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 275 (447)
..+++|+|+.+.|+++++++.+.++||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 34799999999999999999999999987763
No 499
>PTZ00384 choline kinase; Provisional
Probab=94.34 E-value=0.44 Score=46.72 Aligned_cols=74 Identities=14% Similarity=0.204 Sum_probs=43.6
Q ss_pred CeeeecCCeEEEEEEECCC--cE-----EEEEEeccccccchHHHHHHHHHHHHhcCCCceee-EeeeeecCCcceEEEe
Q 013238 128 NILGRGGFGKVYKGRLTDG--SL-----VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR-LRGFCMTPTERLLVYP 199 (447)
Q Consensus 128 ~~lg~G~~g~V~~~~~~~~--~~-----vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~~~~lv~e 199 (447)
+.|..|-.+.+|++...++ .. |.++..... . .......+|+++++.+...++-+ +++.+. .++++|
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~-~-~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~e 129 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY-N-SLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQE 129 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCC-C-ceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEEEE
Confidence 3455688899999976532 22 444432111 1 11113456888888887555544 444432 369999
Q ss_pred cccCCcch
Q 013238 200 FMVNGSVA 207 (447)
Q Consensus 200 ~~~~gsL~ 207 (447)
|++|.+|.
T Consensus 130 fIeGr~l~ 137 (383)
T PTZ00384 130 WVEGNTMG 137 (383)
T ss_pred EeccccCC
Confidence 99887664
No 500
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.12 E-value=0.029 Score=30.07 Aligned_cols=17 Identities=47% Similarity=0.743 Sum_probs=15.1
Q ss_pred CCeeeCCCCcccccCCCC
Q 013238 1 MNCRDLSNNKLTGDIPTN 18 (447)
Q Consensus 1 l~~~~ls~N~lsG~iP~~ 18 (447)
|..||||+|+|+ .||..
T Consensus 2 L~~Ldls~n~l~-~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSS 18 (22)
T ss_dssp ESEEEETSSEES-EEGTT
T ss_pred ccEEECCCCcCE-eCChh
Confidence 678999999999 89865
Done!