Query 013239
Match_columns 447
No_of_seqs 310 out of 964
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 06:49:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013239.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013239hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 1E-103 3E-108 798.7 29.9 342 98-440 1-346 (346)
2 3zsc_A Pectate trisaccharide-l 100.0 1.2E-70 4.1E-75 555.3 26.7 283 121-438 13-328 (340)
3 2qy1_A Pectate lyase II; GAG l 100.0 2.5E-69 8.4E-74 543.9 19.4 275 121-438 1-324 (330)
4 1pcl_A Pectate lyase E; lyase 100.0 1.6E-66 5.5E-71 528.2 25.8 297 117-438 3-352 (355)
5 3vmv_A Pectate lyase; polysacc 100.0 8.9E-67 3.1E-71 524.7 22.4 278 120-438 2-322 (326)
6 1pe9_A Pectate lyase A; parall 100.0 2E-66 6.8E-71 528.5 22.3 289 121-438 13-358 (361)
7 2o04_A Pectate lyase, PL; hexa 100.0 2.5E-64 8.4E-69 518.9 20.6 290 121-438 10-395 (399)
8 1vbl_A Pectate lyase 47; PL 47 100.0 1.6E-63 5.5E-68 515.1 24.7 293 121-438 10-412 (416)
9 1air_A Pectate lyase C, PELC; 100.0 2.3E-62 7.8E-67 497.4 18.8 276 121-439 3-341 (353)
10 1idk_A Pectin lyase A; signal, 100.0 2.9E-61 1E-65 490.2 22.1 218 117-371 2-283 (359)
11 1qcx_A Pectin lyase B; beta-he 100.0 2.5E-59 8.6E-64 476.0 21.1 217 118-371 3-283 (359)
12 3gqn_A Preneck appendage prote 98.5 9.8E-07 3.4E-11 97.0 15.2 148 182-350 108-281 (772)
13 3gq8_A Preneck appendage prote 98.5 9.5E-07 3.2E-11 95.3 14.2 148 182-350 108-281 (609)
14 1ru4_A Pectate lyase, PEL9A; p 98.2 0.00018 6.2E-09 74.0 21.9 114 153-290 35-172 (400)
15 1ia5_A Polygalacturonase; glyc 98.2 3.8E-05 1.3E-09 77.1 15.8 128 202-347 127-257 (339)
16 1bhe_A PEHA, polygalacturonase 98.1 2.8E-05 9.6E-10 78.8 14.4 121 202-347 174-302 (376)
17 2iq7_A Endopolygalacturonase; 98.1 6.4E-05 2.2E-09 75.4 16.0 128 202-347 123-253 (339)
18 2uvf_A Exopolygalacturonase; G 98.0 7.5E-05 2.6E-09 80.5 15.7 129 163-329 329-467 (608)
19 1rmg_A Rgase A, rhamnogalactur 98.0 0.0002 6.8E-09 74.0 17.9 119 203-346 151-271 (422)
20 3jur_A EXO-poly-alpha-D-galact 98.0 6.8E-05 2.3E-09 78.2 14.5 121 202-347 213-349 (448)
21 2iq7_A Endopolygalacturonase; 98.0 7.6E-05 2.6E-09 74.8 14.1 86 204-320 102-196 (339)
22 1ia5_A Polygalacturonase; glyc 98.0 8.1E-05 2.8E-09 74.7 14.1 86 204-320 106-200 (339)
23 1nhc_A Polygalacturonase I; be 98.0 0.00011 3.6E-09 73.7 14.8 128 202-348 123-253 (336)
24 1nhc_A Polygalacturonase I; be 97.9 0.00012 4.1E-09 73.3 13.6 84 204-319 102-194 (336)
25 2pyg_A Poly(beta-D-mannuronate 97.9 0.00014 4.9E-09 72.4 14.2 154 209-368 132-294 (377)
26 1hg8_A Endopolygalacturonase; 97.8 0.00033 1.1E-08 70.6 15.3 119 202-330 127-245 (349)
27 1czf_A Polygalacturonase II; b 97.8 0.00024 8.3E-09 72.0 14.2 110 202-330 149-258 (362)
28 2pyg_A Poly(beta-D-mannuronate 97.8 0.00079 2.7E-08 67.0 17.2 203 156-367 22-270 (377)
29 1bhe_A PEHA, polygalacturonase 97.8 0.0021 7.2E-08 65.0 20.3 137 203-370 152-307 (376)
30 1czf_A Polygalacturonase II; b 97.7 0.00016 5.4E-09 73.4 11.5 107 182-320 97-221 (362)
31 1rmg_A Rgase A, rhamnogalactur 97.7 0.00051 1.7E-08 71.0 15.3 123 184-343 106-245 (422)
32 1dbg_A Chondroitinase B; beta 97.7 0.00044 1.5E-08 73.3 15.0 121 155-290 33-169 (506)
33 1hg8_A Endopolygalacturonase; 97.7 0.00085 2.9E-08 67.6 15.4 85 204-319 104-207 (349)
34 1k5c_A Endopolygalacturonase; 97.5 0.00081 2.8E-08 67.5 13.3 128 202-349 119-251 (335)
35 2inu_A Insulin fructotransfera 97.5 0.0007 2.4E-08 70.0 12.7 185 172-370 63-302 (410)
36 1pxz_A Major pollen allergen J 97.4 0.0073 2.5E-07 61.0 17.7 137 201-369 149-308 (346)
37 2uvf_A Exopolygalacturonase; G 97.3 0.011 3.8E-07 63.7 20.0 139 204-367 333-490 (608)
38 3zsc_A Pectate trisaccharide-l 97.3 0.018 6.1E-07 58.2 19.5 137 202-369 116-289 (340)
39 3gqn_A Preneck appendage prote 97.2 0.0028 9.6E-08 70.0 14.1 89 209-320 181-273 (772)
40 3jur_A EXO-poly-alpha-D-galact 97.2 0.0042 1.4E-07 64.7 14.8 92 204-318 192-290 (448)
41 3gq8_A Preneck appendage prote 97.2 0.0042 1.4E-07 67.2 15.1 89 210-321 182-274 (609)
42 1qcx_A Pectin lyase B; beta-he 97.2 0.0047 1.6E-07 62.7 14.5 113 246-367 123-256 (359)
43 1h80_A IOTA-carrageenase; hydr 97.1 0.005 1.7E-07 64.6 14.3 103 204-318 134-242 (464)
44 1ogo_X Dextranase; hydrolase, 97.0 0.0076 2.6E-07 64.8 13.9 64 246-318 375-440 (574)
45 1k5c_A Endopolygalacturonase; 96.9 0.0042 1.4E-07 62.3 10.2 107 181-320 67-193 (335)
46 3vmv_A Pectate lyase; polysacc 96.7 0.039 1.3E-06 55.4 15.8 146 202-369 120-289 (326)
47 1dbg_A Chondroitinase B; beta 96.6 0.026 9E-07 59.8 14.5 56 310-368 253-313 (506)
48 1idk_A Pectin lyase A; signal, 96.6 0.03 1E-06 56.9 14.1 114 202-344 153-279 (359)
49 1gq8_A Pectinesterase; hydrola 96.4 0.019 6.5E-07 57.4 11.4 122 155-299 21-162 (319)
50 1ru4_A Pectate lyase, PEL9A; p 96.3 0.14 4.9E-06 52.4 17.7 161 204-368 131-319 (400)
51 1ogo_X Dextranase; hydrolase, 96.3 0.029 9.9E-07 60.3 12.9 76 209-318 331-412 (574)
52 1xg2_A Pectinesterase 1; prote 96.3 0.021 7E-07 57.1 10.8 123 155-300 17-159 (317)
53 1x0c_A Isopullulanase; glycosi 96.2 0.06 2.1E-06 57.5 14.8 99 208-319 290-403 (549)
54 1x0c_A Isopullulanase; glycosi 96.2 0.075 2.6E-06 56.8 15.2 78 211-292 318-406 (549)
55 2nsp_A Pectinesterase A; micha 95.9 0.063 2.2E-06 54.1 12.2 134 155-300 20-181 (342)
56 2o04_A Pectate lyase, PL; hexa 95.8 0.077 2.6E-06 54.6 12.8 151 202-366 183-354 (399)
57 1pcl_A Pectate lyase E; lyase 95.8 0.082 2.8E-06 53.6 12.6 129 202-344 133-279 (355)
58 3uw0_A Pectinesterase; right-h 95.7 0.094 3.2E-06 53.4 12.4 136 155-300 46-208 (364)
59 1vbl_A Pectate lyase 47; PL 47 95.6 0.13 4.4E-06 53.3 13.4 151 202-366 189-361 (416)
60 2qy1_A Pectate lyase II; GAG l 95.5 0.14 4.7E-06 51.3 12.7 144 202-366 113-272 (330)
61 1air_A Pectate lyase C, PELC; 95.3 0.082 2.8E-06 53.6 10.5 146 202-366 130-285 (353)
62 2inu_A Insulin fructotransfera 95.3 0.073 2.5E-06 55.1 10.2 64 245-318 205-272 (410)
63 1h80_A IOTA-carrageenase; hydr 94.8 0.13 4.4E-06 54.0 10.7 125 163-318 130-268 (464)
64 1pe9_A Pectate lyase A; parall 93.8 0.23 7.7E-06 50.5 9.7 129 202-344 143-290 (361)
65 2x6w_A Tail spike protein; vir 92.1 0.57 2E-05 50.6 10.2 85 204-318 200-289 (600)
66 2vbk_A Tailspike-protein; vira 83.3 20 0.00068 37.9 14.4 206 156-372 71-337 (514)
67 3grh_A YBHC, acyl-COA thioeste 82.1 8.2 0.00028 40.1 11.0 122 155-290 91-277 (422)
68 3eqn_A Glucan 1,3-beta-glucosi 80.3 27 0.00094 38.7 14.9 46 246-294 201-246 (758)
69 3t9g_A Pectate lyase; PL3, par 67.0 34 0.0012 32.0 9.9 29 246-274 87-115 (196)
70 1ee6_A Pectate lyase; parallel 65.7 18 0.00063 33.8 7.8 40 245-285 82-121 (197)
71 2x6w_A Tail spike protein; vir 60.2 6.6 0.00023 42.5 4.3 64 205-300 180-253 (600)
72 1gq8_A Pectinesterase; hydrola 41.8 43 0.0015 33.1 6.5 60 203-290 115-174 (319)
73 1xg2_A Pectinesterase 1; prote 40.9 53 0.0018 32.5 7.0 60 203-290 111-170 (317)
74 2x3h_A K5 lyase, K5A lyase; ba 27.0 2.9E+02 0.01 27.9 9.6 113 186-299 142-269 (542)
75 1vib_A Neurotoxin B-IV; hydrox 23.0 9.4 0.00032 28.1 -1.5 22 101-122 20-42 (55)
76 3n6z_A Putative immunoglobulin 23.0 59 0.002 32.9 3.9 116 93-224 2-139 (363)
77 3t9g_A Pectate lyase; PL3, par 20.4 1.7E+02 0.0058 27.3 6.0 68 205-290 113-180 (196)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=9.9e-104 Score=798.68 Aligned_cols=342 Identities=47% Similarity=0.872 Sum_probs=326.9
Q ss_pred CCccccccccCccccccccccccCcccccCccccCCCCeEEEEcCCCCCCCCCCCCcchhhhhcCCCCeEEEEeeceEEE
Q 013239 98 GNPIDDCWRCDSRWYLRRKRLADCAIGFGRNAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQDRPLWIVFKRDMVIT 177 (447)
Q Consensus 98 ~n~id~cwr~~~~w~~~r~~lA~~A~GFG~~ttGG~gG~vy~VT~~~D~~~~~~~pGtLR~Av~q~~P~~IVF~~~g~I~ 177 (447)
+||||+||||+|+|+.+||+||+||+|||++||||+||++|+||+++| ++++|+|||||+||++++||||||+++|+|+
T Consensus 1 ~~~~~~c~~~~~~w~~~~~~~~~~a~Gfg~~ttGG~gG~v~~VT~~~d-~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I~ 79 (346)
T 1pxz_A 1 DNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDD-NPVNPTPGTLRYGATREKALWIIFSQNMNIK 79 (346)
T ss_dssp CCTTHHHHHSSCCTTTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCC-CTTSCCTTSHHHHHHCSSCEEEEESSCEEEC
T ss_pred CCccchhhccCcchhhhhhhcccCCccccCCCcCCCCccEEEECChHH-cccccCcchhHHHhccCCCeEEEEcCCcEEe
Confidence 699999999999999999999999999999999999999999999876 6899999999999999999999999999999
Q ss_pred eCceEEecCCcEEEccCceEEEec-CceEEEeccccEEEEceEEEeccCCCCccc-ccCCCCcCCcccCCCCeEEeecCc
Q 013239 178 LKQELIMNSFKTIDGRGVNVHIAN-GACITIQFITNVIIHGINIHDCKPTGNAMV-RSSPSHYGWRTMADGDAISIFGSS 255 (447)
Q Consensus 178 L~~~L~I~SnkTI~G~gA~~~I~~-G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i-~~s~~~~g~r~~~d~DaIsI~gs~ 255 (447)
|+++|.|.|||||+|||++++|.+ |+||+|++++|||||||+|+++.|.+++.| |+++.|+|++...++|||+|++++
T Consensus 80 l~~~l~V~sn~TI~G~ga~~~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~ 159 (346)
T 1pxz_A 80 LKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVT 159 (346)
T ss_dssp CSSCEECCSSEEEECTTSCEEEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCE
T ss_pred cCccEEecCCeEEEccCCceEEeCCcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCc
Confidence 999999999999999999999985 689999999999999999999998887777 999999998888999999999999
Q ss_pred eEEEEeeEeecCCCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceeccCeEE
Q 013239 256 HIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFH 335 (447)
Q Consensus 256 nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~G~~H 335 (447)
|||||||+|+|+.||++|+++++++||||||+|++|+|+||+|++|+++.|+.++||||||||++++.+||||+|+|++|
T Consensus 160 nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~g~~h 239 (346)
T 1pxz_A 160 NAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVH 239 (346)
T ss_dssp EEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEESSEEE
T ss_pred eEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEecceEE
Confidence 99999999999999999999999999999999999999999999999888888999999999966899999999999999
Q ss_pred EEcceeeCceeeeeecCCCceEEEeccEEeCCCCccccceeeeccCC-CCcccCCeeeccCceEEeceEEccCCCCCCC-
Q 013239 336 VVNNDYTHWVMYAIGGSANPTINSQGNRYLAPENTFAKEVTKRVDTS-TAVWRGWNWRSEGDMLLNGAYFTPSGAGSGA- 413 (447)
Q Consensus 336 vvNN~y~nw~~Yaigg~~~~~I~segN~F~a~~~~~~k~vt~r~~~~-~~~~~~w~w~s~Gd~~~nGa~f~~sg~~~~~- 413 (447)
++||||++|.+|++++++++++++|||||++++++..|++++|.+++ +.+|++|+|+++||+|+||++|++||.+.+.
T Consensus 240 v~NN~~~~~~~~~i~~~~~~~i~~egN~F~~~~~~~~k~v~~~~~~~~~~~~~~~~~~~~g~~~~nG~~~~~s~~~~~~~ 319 (346)
T 1pxz_A 240 VANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSGKTEETN 319 (346)
T ss_dssp EESCEECCCSSCSEEEESCCEEEEESCEEECCSCGGGCBSEEECSCSCHHHHTTSCEEEESCEEETTCBCCCBSCCCCCC
T ss_pred EEeeEEEcccceEEeccCCceEEEECCEEECCCCCcccccEEEeccCCccccccccEecCCCeEEeceEecCCCCCccCC
Confidence 99999999999999999999999999999999999899999998776 6789999999999999999999999987654
Q ss_pred CCCCCCccccCCCCcccccccccccCC
Q 013239 414 SYARASSLGAKSSSSVGTLTSNAGALR 440 (447)
Q Consensus 414 ~y~~~~~~~~~~~s~v~~lt~~aG~l~ 440 (447)
.|+++++|+++|+++|++||++||+|.
T Consensus 320 ~y~~~~~~~~~~~~~v~~~~~~aG~~~ 346 (346)
T 1pxz_A 320 IYNSNEAFKVENGNAAPQLTKNAGVVT 346 (346)
T ss_dssp CCCTTTCCCCCCGGGHHHHTTTCSSCC
T ss_pred CCCcccccccCCHHHHHHHhhhccCCC
Confidence 599999999999999999999999994
No 2
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=100.00 E-value=1.2e-70 Score=555.35 Aligned_cols=283 Identities=29% Similarity=0.359 Sum_probs=236.3
Q ss_pred CcccccCccccCCCCeEEEEcCCCCCCCCCCCCcchhhhhcCCCCeEEEEeeceEEEeCceEEecCCcEEEccCceEEEe
Q 013239 121 CAIGFGRNAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIA 200 (447)
Q Consensus 121 ~A~GFG~~ttGG~gG~vy~VT~~~D~~~~~~~pGtLR~Av~q~~P~~IVF~~~g~I~L~~~L~I~SnkTI~G~gA~~~I~ 200 (447)
.|||||++||||+||++|+||+++| ||+||++++||||+|++.+.++++++|.|.|||||+|||++ +|.
T Consensus 13 ~AeG~g~~ttGG~gG~v~~VTtl~d----------Lr~al~~~~PriIvv~G~I~~~~~~~l~v~snkTI~G~ga~-~I~ 81 (340)
T 3zsc_A 13 PTADLPEGTVGGLGGEIVFVRTAEE----------LEKYTTAEGKYVIVVDGTIVFEPKREIKVLSDKTIVGINDA-KIV 81 (340)
T ss_dssp CCSSCTTSCCTTTTSEEEEECSHHH----------HHHHHTSSSCEEEEEEEEEEEEEEEEEEECSSEEEEEEEEE-EEE
T ss_pred cccccCCCCccCCCceEEEeCCHHH----------HHHHHhCCCCEEEEECcEEEeCCcceEEecCCCEEEeccCc-EEe
Confidence 6889999999999999999999998 99999999999999965544444499999999999999999 887
Q ss_pred cCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCC-cccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCc
Q 013239 201 NGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGW-RTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGST 279 (447)
Q Consensus 201 ~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~-r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~ 279 (447)
|.||+|++++|||||||+||++.+.+ .| +...++|||+|++++|||||||+|+|+.||++|++++++
T Consensus 82 -G~Gi~I~~a~NVIIrnl~i~~~~~~~-----------~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~ 149 (340)
T 3zsc_A 82 -GGGLVIKDAQNVIIRNIHFEGFYMED-----------DPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSN 149 (340)
T ss_dssp -EEEEEEESCEEEEEESCEEECCCCTT-----------CTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCE
T ss_pred -cCceEEEcCceEEEeCeEEECCcccc-----------CccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCc
Confidence 78999999999999999999876421 12 124689999999999999999999999999999999999
Q ss_pred eEEEEcceeccCCeeeEecCCCCcc--CC-ccceEEEEeeEecCCCcCCCceeccCeEEEEcceeeC----------cee
Q 013239 280 AITVSNNYFTHHNEVMLLGHSDSYT--RD-KVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTH----------WVM 346 (447)
Q Consensus 280 ~ITISnn~f~~H~k~mLiG~sD~~~--~d-~~~~VTihhN~F~~~~~qR~Pr~R~G~~HvvNN~y~n----------w~~ 346 (447)
+||||||+|++|+|+||+|++|++. .| +.++|||||||| +++.+||||+|+|++|+|||||++ |.+
T Consensus 150 ~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~ 228 (340)
T 3zsc_A 150 YITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYF-KNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPI 228 (340)
T ss_dssp EEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEE-ESCCBCTTEEESSEEEEESCEEECCCCCSCSSCCSCC
T ss_pred eEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEe-cCCCCCCCcccCCeEEEEccEEECCccccccccceee
Confidence 9999999999999999999998763 34 479999999999 589999999999999999999999 999
Q ss_pred eeeecCCCceEEEeccEEeCCCCccc-----cceeeeccCCCCcccCCeeeccCceEEec----eEEccCCCCC------
Q 013239 347 YAIGGSANPTINSQGNRYLAPENTFA-----KEVTKRVDTSTAVWRGWNWRSEGDMLLNG----AYFTPSGAGS------ 411 (447)
Q Consensus 347 Yaigg~~~~~I~segN~F~a~~~~~~-----k~vt~r~~~~~~~~~~w~w~s~Gd~~~nG----a~f~~sg~~~------ 411 (447)
||++++++++|++|+|||+++.++.. .+++...... .|.+.+.| +.|..++...
T Consensus 229 yai~~~~~a~i~~E~N~F~~~~~~~~~~~~~~p~~~~~~~~-----------~G~~~~~~~~~~n~~~~~~~~~~~~~~~ 297 (340)
T 3zsc_A 229 YGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPV-----------EGYLTLGEGDAKNEFYYCKEPEVRPVEE 297 (340)
T ss_dssp EEEEEETTCEEEEESCEEECSCHHHHHTTCCBEEEEECTTT-----------BCEEEECCGGGCCEEESBCCCCCBCSST
T ss_pred eeEecCCCCEEEEECcEEECCCcccccccccccccccCCCC-----------ceEEEecCcccceeeccCCCCccccccC
Confidence 99999999999999999999887211 1233332222 34555555 6665554322
Q ss_pred ---CCCCCCCCccccCCCCccccc-cccccc
Q 013239 412 ---GASYARASSLGAKSSSSVGTL-TSNAGA 438 (447)
Q Consensus 412 ---~~~y~~~~~~~~~~~s~v~~l-t~~aG~ 438 (447)
...+..+|+|++.|++.|+.+ ++.||+
T Consensus 298 ~~~~~~~~~pY~Y~l~~a~~v~~~V~~~AG~ 328 (340)
T 3zsc_A 298 GKPALDPREYYDYTLDPVQDVPKIVVDGAGA 328 (340)
T ss_dssp TSCSCCGGGTCCCCCCCGGGHHHHHHHHCST
T ss_pred CccccccCCCceeecCcHHHhhHHHhhcCCC
Confidence 112356789999999988877 566665
No 3
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=100.00 E-value=2.5e-69 Score=543.91 Aligned_cols=275 Identities=26% Similarity=0.336 Sum_probs=239.0
Q ss_pred CcccccCccccCCCCeEEEEcCCCCCCCCCCCCcchhhhhcC---CCCeEEEEeeceEEEeCc---------------eE
Q 013239 121 CAIGFGRNAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQ---DRPLWIVFKRDMVITLKQ---------------EL 182 (447)
Q Consensus 121 ~A~GFG~~ttGG~gG~vy~VT~~~D~~~~~~~pGtLR~Av~q---~~P~~IVF~~~g~I~L~~---------------~L 182 (447)
+|+|||++||||++|++|+||++++ ||+||.+ ++||||+| +|+|+++. +|
T Consensus 1 ga~Gfa~~ttGG~gg~~~~Vtt~~~----------L~~al~~~~~~~p~iI~~--~G~i~~~~~~~~c~~~~~~~~~~~l 68 (330)
T 2qy1_A 1 GPVGYGAGTTGGGNKVPVNVATFEA----------MQSAIDSYSGSGGLVLNY--TGKFDFGTIKDVCAQWKLPAKTVQI 68 (330)
T ss_dssp CCCSTTTTCCTTTTSCCEEECSHHH----------HHHHHHHSCSSSCEEEEE--CCBCCGGGCCCGGGSTTSCCCEEEE
T ss_pred CCceeecCCCCCCCceEEEcCCHHH----------HHHHHhccCCCCCEEEEE--ccEEecccccccccccccccceeEE
Confidence 5899999999999999999999987 9999984 89999999 67898874 78
Q ss_pred EecCCcEEEccCceEEEecCceEEEe-ccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeec-----Cce
Q 013239 183 IMNSFKTIDGRGVNVHIANGACITIQ-FITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFG-----SSH 256 (447)
Q Consensus 183 ~I~SnkTI~G~gA~~~I~~G~gi~i~-~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~g-----s~n 256 (447)
.+.|||||+|+++. |. |.||+|+ +++|||||||+|+++.++ .++|+|+|++ ++|
T Consensus 69 ~v~sn~TI~G~~a~--i~-g~gl~i~~~~~NVIIrnl~i~~~~~~-----------------~~~DaI~i~g~~~~~s~n 128 (330)
T 2qy1_A 69 KNKSDVTIKGANGS--AA-NFGIRVVGNAHNVIIQNMTIGLLQGG-----------------EDADSISLEGNSSGEPSK 128 (330)
T ss_dssp ESCCSEEEEECTTC--BB-SSEEEEESSCEEEEEESCEEESCSSG-----------------GGCCSEEEECBTTBCCEE
T ss_pred EcCCCeEEECCCcE--Ee-eeeEEEeCCCCeEEEeCeEEeCCCCC-----------------CCCcceeeccccCccccc
Confidence 88999999998764 65 8899999 999999999999987531 4789999995 999
Q ss_pred EEEEeeEeecCC-----------CCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCC
Q 013239 257 IWIDHNSLSNCA-----------DGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQR 325 (447)
Q Consensus 257 VWIDHcS~S~~~-----------DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR 325 (447)
||||||+|+|.. ||+||+++++++||||||+|++|+|+||+|++|++..|+.++|||||||| +++.||
T Consensus 129 VWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f-~~~~~R 207 (330)
T 2qy1_A 129 IWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRF-ENVESR 207 (330)
T ss_dssp EEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEE-EEEEEC
T ss_pred EEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEE-cCCCCC
Confidence 999999999876 99999999999999999999999999999999998777789999999999 689999
Q ss_pred CceeccCeEEEEcceeeCceeeeeecCCCceEEEeccEEeCCCCccccceeeeccCCCCcccCCeeeccCceEEe--ceE
Q 013239 326 MPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPENTFAKEVTKRVDTSTAVWRGWNWRSEGDMLLN--GAY 403 (447)
Q Consensus 326 ~Pr~R~G~~HvvNN~y~nw~~Yaigg~~~~~I~segN~F~a~~~~~~k~vt~r~~~~~~~~~~w~w~s~Gd~~~n--Ga~ 403 (447)
|||+|+|++|+|||||++|.+|+++++++++|++|+|||++++++ ++++. + ..+..|+| .|+ |+| ++.
T Consensus 208 ~Pr~r~G~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p----~~~~~-~--~~~g~~~~--~~n-~~~~~~~~ 277 (330)
T 2qy1_A 208 VPLQRFGLSHIYNNYFNNVTTSGINVRMGGIAKIESNYFENIKNP----VTSRD-S--SEIGYWDL--INN-YVGSGITW 277 (330)
T ss_dssp TTEEESSEEEEESCEEEEECSCSEEEETTCEEEEESCEEEEEESS----EEECS-S--SSBCEEEE--ESC-EECSCEEC
T ss_pred CCceecceEEEEeeEEEcccceEeccCCCcEEEEEccEEECCCCc----eeecc-C--CCceeEEE--eCC-cccccccc
Confidence 999999999999999999999999999999999999999998765 55552 2 22444555 567 788 777
Q ss_pred EccCCCC---------CCCCCC--CCCccccCCCCcccc-ccccccc
Q 013239 404 FTPSGAG---------SGASYA--RASSLGAKSSSSVGT-LTSNAGA 438 (447)
Q Consensus 404 f~~sg~~---------~~~~y~--~~~~~~~~~~s~v~~-lt~~aG~ 438 (447)
+.+++.. ....|. .+|+|++.|++.|+. +++.||+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~y~~~~a~~V~~~V~~~AGa 324 (330)
T 2qy1_A 278 GTPDGSKPYANATNWISTKVFPESLGYIYTVTPAAQVKAKVIATAGA 324 (330)
T ss_dssp CCCSSSSCCEECTTCCCSSCCCSCCCSCCCCCCGGGHHHHHHHHCST
T ss_pred cccCcccccccccccCcccccccCCCceeeeCCHHHHHHhhHhccCC
Confidence 7776521 113465 788999999999998 6889987
No 4
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=100.00 E-value=1.6e-66 Score=528.18 Aligned_cols=297 Identities=27% Similarity=0.405 Sum_probs=244.3
Q ss_pred ccccCcccccC---ccccCCCCe-EEEEcCCCCCCCCCCCCcchhhhh--cCCCCeEEEEeeceEEEeCc----------
Q 013239 117 RLADCAIGFGR---NAIGGRDGR-YYVVSDPGDDDAVNPKPGTLRHAV--IQDRPLWIVFKRDMVITLKQ---------- 180 (447)
Q Consensus 117 ~lA~~A~GFG~---~ttGG~gG~-vy~VT~~~D~~~~~~~pGtLR~Av--~q~~P~~IVF~~~g~I~L~~---------- 180 (447)
.+..+++|||+ +||||++|+ +|+||+++| ||+|| .+++||+|+ ++|+|++..
T Consensus 3 ~~~~~~~G~a~~~~gtTGG~~g~~v~~Vtt~~~----------L~~al~~~~~~p~VI~--V~GtI~~~~~~~~~s~~~~ 70 (355)
T 1pcl_A 3 ETDAATTGWATQNGGTTGGAKAAKAVEVKNISD----------FKKALNGTDSSAKIIK--VTGPIDISGGKAYTSFDDQ 70 (355)
T ss_pred ccccCCcceeecCCCCccCCCCceEEEeCCHHH----------HHHHHhhCCCCcEEEE--ECCEEecCCcccccccccc
Confidence 44558999998 799999998 799999999 99999 789999765 578999974
Q ss_pred ----eEEecCCcEEEccCceEEEecCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCce
Q 013239 181 ----ELIMNSFKTIDGRGVNVHIANGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSH 256 (447)
Q Consensus 181 ----~L~I~SnkTI~G~gA~~~I~~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~n 256 (447)
+|.|.|||||+|+|+.++|. |.+|+|++++|||||||+|++.....+. .+ | ..||+ +++|+|+|++++|
T Consensus 71 ~~~~~l~v~sn~TI~G~G~~~~i~-g~gl~i~~~~NVIIrnl~i~~~~~~~p~--~~-~-~~g~~--~~~DaI~i~~s~n 143 (355)
T 1pcl_A 71 KARSQISIPSNTTIIGVGSNGKFT-NGSLVIKGVKNVILRNLYIETPVDVAPH--YE-S-GDGWN--AEWDAAVIDNSTN 143 (355)
T ss_pred ccceeEEeCCCeEEEEecCCeEEe-cCEEEEecCCeEEEeeeEEEcCcccccc--cc-c-ccCcc--ccCceEEecCCCc
Confidence 78889999999999999998 7899999999999999999975310000 00 0 12453 6899999999999
Q ss_pred EEEEeeEeecC-----------------CCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCcc-CC-ccceEEEEeeE
Q 013239 257 IWIDHNSLSNC-----------------ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYT-RD-KVMQVTIAYNH 317 (447)
Q Consensus 257 VWIDHcS~S~~-----------------~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~-~d-~~~~VTihhN~ 317 (447)
||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++. .| +.|+|||||||
T Consensus 144 VWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~ 223 (355)
T 1pcl_A 144 VWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNV 223 (355)
T ss_pred EEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcE
Confidence 99999999997 6999999999999999999999999999999999875 56 58999999999
Q ss_pred ecCCCcCCCceeccCeEEEEcceeeC---ce----eeeeecCCCceEEEeccEEeCCCCccccceeeeccCCCCcccCCe
Q 013239 318 FGEGLIQRMPRCRHGYFHVVNNDYTH---WV----MYAIGGSANPTINSQGNRYLAPENTFAKEVTKRVDTSTAVWRGWN 390 (447)
Q Consensus 318 F~~~~~qR~Pr~R~G~~HvvNN~y~n---w~----~Yaigg~~~~~I~segN~F~a~~~~~~k~vt~r~~~~~~~~~~w~ 390 (447)
| +++.|||||+|+|++|+|||||++ |+ +|+++++++++|++|+|||++++ .|+++++. .+...|+.|.
T Consensus 224 f-~~~~~R~PrvR~G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~~---~~~~~~~~-~~~~~~~~~~ 298 (355)
T 1pcl_A 224 F-DRVTERAPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSN---LKSIDGKN-PECSIVKQFN 298 (355)
T ss_pred E-eCCcccCCceecceEEEEcceEEcccCCCccccceEecCCCCcEEEEEccEEECCC---cccccccc-cccccccccc
Confidence 9 689999999999999999999974 55 89999999999999999999982 36777764 2344577776
Q ss_pred ee--ccCceEEeceEE-ccCCCCCCCCCC--CCCcccc-CCCCccccc-cccccc
Q 013239 391 WR--SEGDMLLNGAYF-TPSGAGSGASYA--RASSLGA-KSSSSVGTL-TSNAGA 438 (447)
Q Consensus 391 w~--s~Gd~~~nGa~f-~~sg~~~~~~y~--~~~~~~~-~~~s~v~~l-t~~aG~ 438 (447)
|. ++.+.++||+.+ ..++.+.. .|. .+++|++ .|++.|+.+ ++.||+
T Consensus 299 ~~~~~~~gn~~~g~~~~~~~~~~~~-~~~~~~~y~y~~~~~a~~v~~~V~~~AGa 352 (355)
T 1pcl_A 299 SKVFSDKGSLVNGSTTTKLDTCGLT-AYKPTLPYKYSAQTMTSSLATSINNNAGY 352 (355)
T ss_pred CceEEecCccccCcCccccccCCcc-ccccCCCCCccCCCcHHHHHHHHHhccCC
Confidence 65 677778999998 55554422 232 3567766 456666665 788886
No 5
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=100.00 E-value=8.9e-67 Score=524.73 Aligned_cols=278 Identities=26% Similarity=0.362 Sum_probs=230.8
Q ss_pred cCcccccC---ccccCCCCeEEEEcCCCCCCCCCCCCcchhhhhc-------CCCCeEEEEeeceEEEeC----ceEEec
Q 013239 120 DCAIGFGR---NAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVI-------QDRPLWIVFKRDMVITLK----QELIMN 185 (447)
Q Consensus 120 ~~A~GFG~---~ttGG~gG~vy~VT~~~D~~~~~~~pGtLR~Av~-------q~~P~~IVF~~~g~I~L~----~~L~I~ 185 (447)
++|+|||+ +||||+||++|+||+++| ||+||+ +++||+|+ ++|+|+|+ ++|.|.
T Consensus 2 ~~~~Gfa~~nggTtGG~gG~vv~Vttl~d----------L~~Al~~~~~~~~~~~p~iI~--V~G~I~l~~~~~~~i~v~ 69 (326)
T 3vmv_A 2 NGPQGYASMNGGTTGGAGGRVEYASTGAQ----------IQQLIDNRSRSNNPDEPLTIY--VNGTITQGNSPQSLIDVK 69 (326)
T ss_dssp -CCSGGGGSTTCCCTTTTSEEEEESSHHH----------HHHHHHHHHHSSCTTSCEEEE--ECSEEESTTCSSSSEEES
T ss_pred CCCceeeecCCCCccCCCCeEEEECCHHH----------HHHHHhhcccccCCCCCEEEE--EeeEEecCCCCCceEEEe
Confidence 68999999 699999999999999999 999999 89999998 68899999 889998
Q ss_pred ---------CCcEEEccCceEEEecCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeec-Cc
Q 013239 186 ---------SFKTIDGRGVNVHIANGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFG-SS 255 (447)
Q Consensus 186 ---------SnkTI~G~gA~~~I~~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~g-s~ 255 (447)
|||||+|+|+.++|. |.+|+|++++|||||||+|+++.+ .++|+|+|++ ++
T Consensus 70 ~~~~~~~~~sn~TI~G~g~~~~i~-G~gl~i~~a~NVIIrNl~i~~~~~------------------~~~DaI~i~~~s~ 130 (326)
T 3vmv_A 70 NHRGKAHEIKNISIIGVGTNGEFD-GIGIRLSNAHNIIIQNVSIHHVRE------------------GEGTAIEVTDDSK 130 (326)
T ss_dssp CTTCTTSCEEEEEEEECTTCCEEE-SCCEEEESEEEEEEESCEEECCCS------------------TTSCSEEEETTCE
T ss_pred cccccccCCCCeEEEecCCCeEEe-CcEEEEEecceEEEECeEEEcCCC------------------CCCCeEEEecCCC
Confidence 999999999999997 889999999999999999997641 4789999997 89
Q ss_pred eEEEEeeEeecC---------CCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCC
Q 013239 256 HIWIDHNSLSNC---------ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRM 326 (447)
Q Consensus 256 nVWIDHcS~S~~---------~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~ 326 (447)
|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++.. ..++|||||||| +++.+|+
T Consensus 131 nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~-~~~~vT~~~N~f-~~~~~R~ 208 (326)
T 3vmv_A 131 NVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASL-APDKITYHHNYF-NNLNSRV 208 (326)
T ss_dssp EEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGG-CCEEEEEESCEE-EEEEECT
T ss_pred cEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCcc-cCccEEEEeeEe-cCCcCcC
Confidence 999999999975 49999999999999999999999999999999987653 236999999999 6899999
Q ss_pred ceeccCeEEEEcceeeCceeeeeecCCCceEEEeccEEeCCCCcc--------ccceeeeccCC-CCcccCCeeeccCce
Q 013239 327 PRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPENTF--------AKEVTKRVDTS-TAVWRGWNWRSEGDM 397 (447)
Q Consensus 327 Pr~R~G~~HvvNN~y~nw~~Yaigg~~~~~I~segN~F~a~~~~~--------~k~vt~r~~~~-~~~~~~w~w~s~Gd~ 397 (447)
||+|+|++|+|||||++|.+|++++++++++++|+|||+++.... .+.++...+++ .+ +|...+..
T Consensus 209 Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~a~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~s~~~g-----~~~~~~n~ 283 (326)
T 3vmv_A 209 PLIRYADVHMFNNYFKDINDTAINSRVGARVFVENNYFDNVGSGQADPTTGFIKGPVGWFYGSPSTG-----YWNLRGNV 283 (326)
T ss_dssp TEEESCEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEESCCSBCTTTCCBCSSEECCSCSSSBC-----EEEEESCE
T ss_pred CcccCCcEEEEccEEECCCceEEeecCCcEEEEEceEEECCcCccccccccccccceeeccCCCCce-----EEEEECCe
Confidence 999999999999999999999999999999999999999983211 12222122211 11 35555555
Q ss_pred EEeceEEccCCCCCCCCCCCCCccccCCCCccccc-cccccc
Q 013239 398 LLNGAYFTPSGAGSGASYARASSLGAKSSSSVGTL-TSNAGA 438 (447)
Q Consensus 398 ~~nGa~f~~sg~~~~~~y~~~~~~~~~~~s~v~~l-t~~aG~ 438 (447)
|+|+.- +.......+..+|+|++.|++.|+.+ .+.||+
T Consensus 284 ~~n~~~---~~~~~~~~~~p~Y~y~l~~a~~V~~~V~~~AG~ 322 (326)
T 3vmv_A 284 FVNTPN---SHLNSTTNFTPPYSYQVQSATQAKSSVEQHSGV 322 (326)
T ss_dssp EESSCC---TTCCCCCCCCCSSCCCCCCHHHHHHHHHHHCSS
T ss_pred EccCcC---cccCCCccccccCeeecCCHHHhhHHHhccCCC
Confidence 555411 00111234666788999999888876 566665
No 6
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=100.00 E-value=2e-66 Score=528.46 Aligned_cols=289 Identities=27% Similarity=0.440 Sum_probs=236.6
Q ss_pred CcccccC---ccccCCCC---eEEEEcCCCCCCCCCCCCcchhhhh-cCCCCeEEEEeeceEEEeCc-------------
Q 013239 121 CAIGFGR---NAIGGRDG---RYYVVSDPGDDDAVNPKPGTLRHAV-IQDRPLWIVFKRDMVITLKQ------------- 180 (447)
Q Consensus 121 ~A~GFG~---~ttGG~gG---~vy~VT~~~D~~~~~~~pGtLR~Av-~q~~P~~IVF~~~g~I~L~~------------- 180 (447)
+++|||+ +||||++| +||+||+++| ||+|| .+++||+|++ +|+|++..
T Consensus 13 ~~~Gfa~~~~gtTGG~~g~~~~v~~Vtt~~d----------L~~al~~~~~p~vI~V--~GtI~~~~~~~~~s~~~~~~~ 80 (361)
T 1pe9_A 13 PTVGWASQNGFTTGGAAATSDNIYIVTNISE----------FTSALSAGAEAKIIQI--KGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CSSSGGGSSSCCCTTTTCCGGGEEEECSHHH----------HHHHHTTTTSCEEEEE--CSEEETTTTCCCCSHHHHHHH
T ss_pred CCCceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhcCCCcEEEEE--CCEEecCCccccccccccccc
Confidence 4899995 89999998 7999999999 99999 8999999875 77999974
Q ss_pred -eEEecCCcEEEccCceEEEecCceEEE---eccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeec-Cc
Q 013239 181 -ELIMNSFKTIDGRGVNVHIANGACITI---QFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFG-SS 255 (447)
Q Consensus 181 -~L~I~SnkTI~G~gA~~~I~~G~gi~i---~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~g-s~ 255 (447)
+|.|.|||||+|+|..++|. |.||+| ++++|||||||+|+++....+.. + | ..||+ +++|+|+|++ ++
T Consensus 81 ~~l~v~snkTI~G~G~~~~i~-g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~--~-~-~~g~~--~~~DaI~i~~~s~ 153 (361)
T 1pe9_A 81 SQINIPANTTVIGLGTDAKFI-NGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHY--E-K-GDGWN--AEWDAMNITNGAH 153 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEE-SSEEEEEGGGTCEEEEEESCEEECCCCSSCEE--E-T-TTEEE--CCCCSEEEETTCE
T ss_pred eeEEecCCcEEEccCCCeEEe-cCEEEEecCCCCceEEEeCeEEEcCccccccc--c-c-ccCcc--cCCceEEeecCCc
Confidence 78899999999999999998 889999 79999999999999753110000 0 0 12454 6899999999 99
Q ss_pred eEEEEeeEeecC-----------------CCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCcc-CC-ccceEEEEee
Q 013239 256 HIWIDHNSLSNC-----------------ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYT-RD-KVMQVTIAYN 316 (447)
Q Consensus 256 nVWIDHcS~S~~-----------------~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~-~d-~~~~VTihhN 316 (447)
|||||||+|+|+ .||+||+++++++||||||+|++|+|+||+|++|++. .| ++|+||||||
T Consensus 154 nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN 233 (361)
T 1pe9_A 154 HVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNN 233 (361)
T ss_dssp EEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESC
T ss_pred eEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECe
Confidence 999999999997 6999999999999999999999999999999999875 45 6899999999
Q ss_pred EecCCCcCCCceeccCeEEEEcceee---Cce----eeeeecCCCceEEEeccEEeCCCCc--cccceeeeccCCCCccc
Q 013239 317 HFGEGLIQRMPRCRHGYFHVVNNDYT---HWV----MYAIGGSANPTINSQGNRYLAPENT--FAKEVTKRVDTSTAVWR 387 (447)
Q Consensus 317 ~F~~~~~qR~Pr~R~G~~HvvNN~y~---nw~----~Yaigg~~~~~I~segN~F~a~~~~--~~k~vt~r~~~~~~~~~ 387 (447)
|| +++.|||||+|+|++|+|||||+ +|. +|+++++++++|++|+|||++++.+ ..+++.+ .|.
T Consensus 234 ~f-~~~~~R~Pr~R~G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~~-------~~~ 305 (361)
T 1pe9_A 234 VF-NRVTERAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVK-------KFN 305 (361)
T ss_dssp EE-EEEEECSSEESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGGGGGEE-------ESS
T ss_pred EE-cCccccCcccccceEEEEcceEecccCCCccccceEecCCCCcEEEEECCEEECCCCccccCceeEE-------ecC
Confidence 99 68999999999999999999996 455 8999999999999999999998543 1233433 244
Q ss_pred CCeeeccCceEEeceEEccCCCCCCCCCCC--CCccccC-CCCccccc-cccccc
Q 013239 388 GWNWRSEGDMLLNGAYFTPSGAGSGASYAR--ASSLGAK-SSSSVGTL-TSNAGA 438 (447)
Q Consensus 388 ~w~w~s~Gd~~~nGa~f~~sg~~~~~~y~~--~~~~~~~-~~s~v~~l-t~~aG~ 438 (447)
.+.|.. .+.++||+.+..++.+. ..|.. +++|++. |++.|+.+ ++.||+
T Consensus 306 ~~~~~~-~gn~~~g~~~~~~~~g~-~~~~~~~~y~y~~~~~a~~V~~~V~~~AGa 358 (361)
T 1pe9_A 306 GSIFSD-NGSVLNGSAVDLSGCGF-SAYTSKIPYIYDVQPMTTELAQSITDNAGS 358 (361)
T ss_dssp CCEEEE-ESCEETTEECCCTTSSC-BCCCSCCCSCCCCCCCCHHHHHHHHHHCST
T ss_pred CcEEEe-cCccccCcCcccCCCCc-cccccCCCCccccCCcHHHHHHHHHhccCC
Confidence 334444 44568999988876653 23443 5778664 66666665 777876
No 7
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=100.00 E-value=2.5e-64 Score=518.91 Aligned_cols=290 Identities=28% Similarity=0.384 Sum_probs=234.0
Q ss_pred CcccccC---ccccCCCCe---EEEEcCCCCCCCCCCCCcchhhhh---cCCCCeEEEEeeceEEEeCc-----------
Q 013239 121 CAIGFGR---NAIGGRDGR---YYVVSDPGDDDAVNPKPGTLRHAV---IQDRPLWIVFKRDMVITLKQ----------- 180 (447)
Q Consensus 121 ~A~GFG~---~ttGG~gG~---vy~VT~~~D~~~~~~~pGtLR~Av---~q~~P~~IVF~~~g~I~L~~----------- 180 (447)
.|+|||+ +||||++|+ ||+||+++| |++|| .+++||+|++ +|+|++..
T Consensus 10 ~a~Gfa~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~priI~v--~GtId~~~~~~g~~~~c~~ 77 (399)
T 2o04_A 10 SNDGWGAYSTGTTGGSKASSSNVYTVSNRNQ----------LVSALGKETNTTPKIIYI--KGTIDMNVDDNLKPLGLND 77 (399)
T ss_dssp TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHHCCTTCCSCEEEEE--CSEEESSBCTTCCBCCHHH
T ss_pred CCcceeecCCCCcCCCCCccceEEEeCCHHH----------HHHHHHhccCCCCEEEEE--cCEEecccCCccccccccc
Confidence 7999999 999999996 999999999 99999 8899999996 67899751
Q ss_pred --------------------------------------------eEEecCCcEEEccCceEEEecCceEEEeccccEEEE
Q 013239 181 --------------------------------------------ELIMNSFKTIDGRGVNVHIANGACITIQFITNVIIH 216 (447)
Q Consensus 181 --------------------------------------------~L~I~SnkTI~G~gA~~~I~~G~gi~i~~a~NVIIR 216 (447)
+|.|.|||||+|+|+.++|. |.+|+|+. +|||||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~-g~gl~i~~-~NVIIr 155 (399)
T 2o04_A 78 YKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVV-GGNFQIKS-DNVIIR 155 (399)
T ss_dssp HCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEE-SCEEEECS-EEEEEE
T ss_pred cccCCcchhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEe-eCEEEeeC-CCEEEe
Confidence 57889999999999999998 88999998 999999
Q ss_pred ceEEEecc---CC-CCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecC-----------------CCCeEEee
Q 013239 217 GINIHDCK---PT-GNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNC-----------------ADGLIDAI 275 (447)
Q Consensus 217 nL~i~~~~---pg-~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~-----------------~DGliDi~ 275 (447)
||+|++.. |. +++. .....| .+++|+|+|++++|||||||+|+|+ .||+||++
T Consensus 156 nl~i~~~~~~~p~~~p~~----~~~~~~--~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~ 229 (399)
T 2o04_A 156 NIEFQDAYDYFPQWDPTD----GSSGNW--NSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDAS 229 (399)
T ss_dssp SCEEECCCCSSCEEETTS----STTCEE--ECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEE
T ss_pred CeEEecCccccccccccc----cccccc--cCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeee
Confidence 99998753 21 0000 001223 2688999999999999999999997 59999999
Q ss_pred eCCceEEEEcceeccCCeeeEecCCCCccCC-ccceEEEEeeEecCCCcCCCceeccCeEEEEcceeeCce-------ee
Q 013239 276 MGSTAITVSNNYFTHHNEVMLLGHSDSYTRD-KVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWV-------MY 347 (447)
Q Consensus 276 ~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d-~~~~VTihhN~F~~~~~qR~Pr~R~G~~HvvNN~y~nw~-------~Y 347 (447)
+++++||||||+|++|+|+||+|++|++..| ++|+|||||||| +++.|||||+|+|++|+|||||++|. +|
T Consensus 230 ~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~~~~~y 308 (399)
T 2o04_A 230 NGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRY-KNIVQAAPRVRFGQVHVYNNYYEGSTSSSSYPFSY 308 (399)
T ss_dssp TTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEE-EEEEECTTEESSCEEEEESCEEECCTTCSSSCCCC
T ss_pred ccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEe-cCCcccCCCcccceEEEEcceEECCCCCCccceee
Confidence 9999999999999999999999999998766 479999999999 68999999999999999999998873 59
Q ss_pred eeecCCCceEEEeccEEeCCCCccccceeeec-cCC-CCcccCCeeeccCceEEeceEEccCCCCCCCCCCCCCccccCC
Q 013239 348 AIGGSANPTINSQGNRYLAPENTFAKEVTKRV-DTS-TAVWRGWNWRSEGDMLLNGAYFTPSGAGSGASYARASSLGAKS 425 (447)
Q Consensus 348 aigg~~~~~I~segN~F~a~~~~~~k~vt~r~-~~~-~~~~~~w~w~s~Gd~~~nGa~f~~sg~~~~~~y~~~~~~~~~~ 425 (447)
+++++++++|++|+|||+++.. ..++++++. ... ...+.+|.|.+..|++. +.+..++. .|.+.+++++.|
T Consensus 309 a~g~~~~~~i~~e~N~F~~~~~-~~~~~~~~~s~~~~~~~~gn~~~g~~~d~~~--~~~~~~~~----~~~p~~~y~~~~ 381 (399)
T 2o04_A 309 AWGIGKSSKIYAQNNVIDVPGL-SAAKTISVFSGGTALYDSGTLLNGTQINASA--ANGLSSSV----GWTPSLHGSIDA 381 (399)
T ss_dssp SEEECTTCEEEEESCEEECTTC-CSGGGEEECTTCCBCEEESCEETTEECCHHH--HTTCBSCC----SCCCCCCCCCCC
T ss_pred EeccCCCcEEEEEceEEECCCC-CccceeeeccCCceEEEeCceecCccccccc--ccccCCCc----ccCCccccccCC
Confidence 9999999999999999999843 345677664 211 12355666555555321 11122222 233334578899
Q ss_pred CCcccccc-ccccc
Q 013239 426 SSSVGTLT-SNAGA 438 (447)
Q Consensus 426 ~s~v~~lt-~~aG~ 438 (447)
++.|+.++ +.||+
T Consensus 382 a~~V~~~V~~~AGa 395 (399)
T 2o04_A 382 SANVKSNVINQAGA 395 (399)
T ss_dssp HHHHHHHHHHHCST
T ss_pred HHHHHHhHHhcCCC
Confidence 99999885 77776
No 8
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=100.00 E-value=1.6e-63 Score=515.12 Aligned_cols=293 Identities=30% Similarity=0.400 Sum_probs=233.6
Q ss_pred CcccccC---ccccCCCCe---EEEEcCCCCCCCCCCCCcchhhhhcCC--------CCeEEEEeeceEEEeCc------
Q 013239 121 CAIGFGR---NAIGGRDGR---YYVVSDPGDDDAVNPKPGTLRHAVIQD--------RPLWIVFKRDMVITLKQ------ 180 (447)
Q Consensus 121 ~A~GFG~---~ttGG~gG~---vy~VT~~~D~~~~~~~pGtLR~Av~q~--------~P~~IVF~~~g~I~L~~------ 180 (447)
.|+|||+ +||||++|+ +|+||+++| ||+||.+. +||+|++ +|+|++..
T Consensus 10 ~~~GfA~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~~~~~~priI~V--~GtId~~~~~~g~~ 77 (416)
T 1vbl_A 10 PYDGWAAYGEGTTGGAMASPQNVFVVTNRTE----------LIQALGGNNHTNQYNSVPKIIYV--KGTIDLNVDDNNQP 77 (416)
T ss_dssp TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHTTSCTTGGGGCCSCEEEEE--CSEEESSBCTTSCB
T ss_pred CCcceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhccccccccCCCCEEEEE--CCEEecccCCCCcc
Confidence 7999999 999999995 999999999 99999864 9999995 67999852
Q ss_pred -------------------------------------------------eEEecCCcEEEccCceEEEecCceEEEeccc
Q 013239 181 -------------------------------------------------ELIMNSFKTIDGRGVNVHIANGACITIQFIT 211 (447)
Q Consensus 181 -------------------------------------------------~L~I~SnkTI~G~gA~~~I~~G~gi~i~~a~ 211 (447)
+|.|.|||||+|+|+.++|. |.+|+|++++
T Consensus 78 ~~c~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~-g~gl~i~~~~ 156 (416)
T 1vbl_A 78 VGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIK-GGGFLIKNVD 156 (416)
T ss_dssp CCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEE-SCEEEEESCE
T ss_pred ccccccccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEe-cCEEEeecCc
Confidence 57889999999999999998 8899999999
Q ss_pred cEEEEceEEEecc---CC-CCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecC-----------------CCC
Q 013239 212 NVIIHGINIHDCK---PT-GNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNC-----------------ADG 270 (447)
Q Consensus 212 NVIIRnL~i~~~~---pg-~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~-----------------~DG 270 (447)
|||||||+|++.. |. +++ ......|+ +++|+|+|++++|||||||+|+|+ .||
T Consensus 157 NVIIrNl~i~~~~~~~p~~~p~----~~~~~~~~--~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DG 230 (416)
T 1vbl_A 157 NVIIRNIEFEAPLDYFPEWDPT----DGTLGEWN--SEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDG 230 (416)
T ss_dssp EEEEESCEEECCCCSSCEEETT----STTTCEEE--CCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCC
T ss_pred eEEEeCeEEEcCcccccccccc----cccccccc--CCCceEEecCCceEEEEccEEecCCCcccccccccCcceeeccc
Confidence 9999999998753 21 000 00112332 689999999999999999999997 699
Q ss_pred eEEeeeCCceEEEEcceeccCCeeeEecCCCCccCC-ccceEEEEeeEecCCCcCCCceeccCeEEEEcceeeCc-----
Q 013239 271 LIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRD-KVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHW----- 344 (447)
Q Consensus 271 liDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d-~~~~VTihhN~F~~~~~qR~Pr~R~G~~HvvNN~y~nw----- 344 (447)
+||+++++++||||||+|++|+|+||+|++|++..| ++|+|||||||| +++.|||||+|+|++|+|||||+++
T Consensus 231 l~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~ 309 (416)
T 1vbl_A 231 ALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYY-KNVTQRLPRVRFGQVHIYNNYYEFSNLADY 309 (416)
T ss_dssp SEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEE-EEEEECSSEESSCEEEEESCEEEECTTSSS
T ss_pred ceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEe-cCCccCCcccccceEEEEcceEECCCCCcc
Confidence 999999999999999999999999999999988766 479999999999 6899999999999999999999864
Q ss_pred -eeeeeecCCCceEEEeccEEeCCCCccccceeeeccCCCCcccCCeeeccCceEE--ec-eEEc-------cCCCCC--
Q 013239 345 -VMYAIGGSANPTINSQGNRYLAPENTFAKEVTKRVDTSTAVWRGWNWRSEGDMLL--NG-AYFT-------PSGAGS-- 411 (447)
Q Consensus 345 -~~Yaigg~~~~~I~segN~F~a~~~~~~k~vt~r~~~~~~~~~~w~w~s~Gd~~~--nG-a~f~-------~sg~~~-- 411 (447)
.+|+|+++++++|++|+|||+++++...++++++..... -.+...|.++. || .... .+....
T Consensus 310 ~~~ya~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~~~~~~-----~~~~~~gn~~~~~ng~~~~d~~~~~n~~~~~~~~~ 384 (416)
T 1vbl_A 310 DFQYAWGVGVFSQIYAQNNYFSFDWDIDPSLIIKVWSKNE-----ESMYETGTIVDLPNGRRYIDLVASYNESNTLQLKK 384 (416)
T ss_dssp CCCCSEEEETTCEEEEESCEEEESSCCCGGGSEEEECSSC-----CEEEEESCEEEETTEEEECCHHHHHHHHCSSCCEE
T ss_pred cceeEeccCCCcEEEEECCEEECCCCCCccceeeeeccCC-----ceEEecCCEEeecCCCcccccccccccCCcccccC
Confidence 469999999999999999999998766666766531111 12233455553 44 2111 011111
Q ss_pred CCCCCCCCccccCCCCccccc-cccccc
Q 013239 412 GASYARASSLGAKSSSSVGTL-TSNAGA 438 (447)
Q Consensus 412 ~~~y~~~~~~~~~~~s~v~~l-t~~aG~ 438 (447)
...+.+.+++++.|++.|+.+ ++.||+
T Consensus 385 ~~~~~P~~~y~~~~a~~V~~~V~~~AGa 412 (416)
T 1vbl_A 385 EVTWKPMFYHVIHPTPSVPALVKAKAGA 412 (416)
T ss_dssp CCSCCCCCCSCCCCGGGHHHHHHHHCST
T ss_pred CcccCCccccccCCHHHHHHHHhhccCC
Confidence 112334446889999888886 677776
No 9
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=100.00 E-value=2.3e-62 Score=497.42 Aligned_cols=276 Identities=24% Similarity=0.275 Sum_probs=231.5
Q ss_pred CcccccC---ccccCCCCeEEEEcCCCCCCCCCCCCcchhhhhcC-----------CCCeEEEEeeceEEEe--------
Q 013239 121 CAIGFGR---NAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQ-----------DRPLWIVFKRDMVITL-------- 178 (447)
Q Consensus 121 ~A~GFG~---~ttGG~gG~vy~VT~~~D~~~~~~~pGtLR~Av~q-----------~~P~~IVF~~~g~I~L-------- 178 (447)
...||+. +++|| +.+|+||++++ |++|+.+ .+++.+||.++|+|+|
T Consensus 3 ~~~G~at~~Ggt~gg--~~~~tvtt~~~----------L~~al~~~~~~~~g~~~~~~~~p~vi~v~GtId~~~~~~~~~ 70 (353)
T 1air_A 3 DTGGYAATAGGNVTG--AVSKTATSMQD----------IVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAAN 70 (353)
T ss_dssp BCSSSCBCCTTCSTT--CEEEEESSHHH----------HHHHHHHTTBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTS
T ss_pred CCCcceecCCCCCCC--cceEEeCCHHH----------HHHHHHhhccccccccccCCCceEEEEEccEEeccccccccc
Confidence 4678886 33333 46789999987 9999954 3444455566889988
Q ss_pred --------CceEEe---cCCcEEEccCceEEEecCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCC
Q 013239 179 --------KQELIM---NSFKTIDGRGVNVHIANGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGD 247 (447)
Q Consensus 179 --------~~~L~I---~SnkTI~G~gA~~~I~~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~D 247 (447)
+++|.| .+||||+|++++ +. |+||+|++++|||||||+|+.. + +...++|
T Consensus 71 ~~~~~~~~~~~~~i~~~~sn~TI~G~~~~--~~-g~gl~i~~~~NVIIrnl~i~~~-~---------------~~~~~~D 131 (353)
T 1air_A 71 ICGQWSKDPRGVEIKEFTKGITIIGANGS--SA-NFGIWIKKSSDVVVQNMRIGYL-P---------------GGAKDGD 131 (353)
T ss_dssp GGGSTTSCCCEEEEESBCSCEEEEECTTC--CB-SSEEEEESCCSEEEESCEEESC-S---------------CGGGTCC
T ss_pred cccccccCCCceEEEecCCCEEEEeccCC--CC-CceEEEeccCcEEEeccEEEeC-C---------------CCCCCCC
Confidence 356777 599999999876 33 8899999999999999999953 1 1236899
Q ss_pred eEEeecCceEEEEeeEeecC-------------CCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEE
Q 013239 248 AISIFGSSHIWIDHNSLSNC-------------ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIA 314 (447)
Q Consensus 248 aIsI~gs~nVWIDHcS~S~~-------------~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTih 314 (447)
+|+|++++|||||||+|+|. .||++|+++++++||||||+|++|+|+||+|++|++.. ++||||
T Consensus 132 aI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~g---~~vT~h 208 (353)
T 1air_A 132 MIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTG---RNITYH 208 (353)
T ss_dssp SEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCCC---CEEEEE
T ss_pred eEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCCC---ceEEEE
Confidence 99999999999999999985 39999999999999999999999999999999987542 799999
Q ss_pred eeEecCCCcCCCceeccCeEEEEcceeeCceeeeeecCCCceEEEeccEEeCCCCccccceeeecc-CCCCccc------
Q 013239 315 YNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPENTFAKEVTKRVD-TSTAVWR------ 387 (447)
Q Consensus 315 hN~F~~~~~qR~Pr~R~G~~HvvNN~y~nw~~Yaigg~~~~~I~segN~F~a~~~~~~k~vt~r~~-~~~~~~~------ 387 (447)
|||| +++.||+||+|+|++|+|||||++|.+|++++++++++++|+|||+++.+| ++++.+ ...++|.
T Consensus 209 hN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~~~p----~~~~~~~~~~g~~~~~~n~~ 283 (353)
T 1air_A 209 HNYY-NDVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAINP----VTSRYDGKNFGTWVLKGNNI 283 (353)
T ss_dssp SCEE-EEEEECSCEEESSEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEEESS----EEECSSSSSCCEEEEESCSC
T ss_pred ceEE-cCCcCCCCCCcCceEEEEccEEECCCCceeccCCCcEEEEEceEEECCCCc----eEecCCCCCCceeEeccccc
Confidence 9999 689999999999999999999999999999999999999999999988655 566643 3356776
Q ss_pred ---------CCeeeccCceEEeceEEccCCCCCCCCCCCCCccccCCCCccc-ccccccccC
Q 013239 388 ---------GWNWRSEGDMLLNGAYFTPSGAGSGASYARASSLGAKSSSSVG-TLTSNAGAL 439 (447)
Q Consensus 388 ---------~w~w~s~Gd~~~nGa~f~~sg~~~~~~y~~~~~~~~~~~s~v~-~lt~~aG~l 439 (447)
+|.|+++++.+++++.|+++|...+. +|+|+++|++.|+ .|++.||+=
T Consensus 284 ~~~~d~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~----~Y~y~~~~a~~V~~~V~~~AGag 341 (353)
T 1air_A 284 TKPADFSTYSITWTADTKPYVNADSWTSTGTFPTV----AYNYSPVSAQCVKDKLPGYAGVG 341 (353)
T ss_dssp CSTHHHHHHTEECCCCSSCCEECTTCCCCSCCCCC----CSCCCCCCHHHHHHHGGGTSSSS
T ss_pred ccccccceecccccCCCccccccccccccCCcccc----ceEEecCCHHHhhhhhhhccCCC
Confidence 89999999999999999888764332 3568999999998 679999974
No 10
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=100.00 E-value=2.9e-61 Score=490.24 Aligned_cols=218 Identities=22% Similarity=0.304 Sum_probs=199.7
Q ss_pred ccccCcccccCccccCCCCeEEEEcCCCCCCCCCCCCcchhhhhcCCCCeEEEEeeceEEEeC-----------------
Q 013239 117 RLADCAIGFGRNAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQDRPLWIVFKRDMVITLK----------------- 179 (447)
Q Consensus 117 ~lA~~A~GFG~~ttGG~gG~vy~VT~~~D~~~~~~~pGtLR~Av~q~~P~~IVF~~~g~I~L~----------------- 179 (447)
.++.+|+|||++||||++|++|+||+++| ||+||++++||||+| +|+|+++
T Consensus 2 ~~~~~a~Gfa~~tTGG~~g~~~~Vtt~~d----------L~~al~~~~prvIvv--~gti~~~~~~G~~t~~~c~~~~~~ 69 (359)
T 1idk_A 2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE----------LVSYLGDDEARVIVL--TKTFDFTDSEGTTTGTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSS
T ss_pred CCCCCCccccCCCCCCCCceEEecCCHHH----------HHHHHcCCCceEEEE--CCEEEeccccCccccccccccccc
Confidence 57889999999999999999999999998 999999999999999 5678864
Q ss_pred --------------------------------ceEEecCCcEEEccCceEEEecCceEEEe-ccccEEEEceEEEeccCC
Q 013239 180 --------------------------------QELIMNSFKTIDGRGVNVHIANGACITIQ-FITNVIIHGINIHDCKPT 226 (447)
Q Consensus 180 --------------------------------~~L~I~SnkTI~G~gA~~~I~~G~gi~i~-~a~NVIIRnL~i~~~~pg 226 (447)
.+|.|.|||||+|+|++++|. |.+|+|+ +++|||||||+||++.|.
T Consensus 70 ~~~~~~~~~~~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~-G~gl~i~~~a~NVIIrnL~i~~~~~~ 148 (359)
T 1idk_A 70 SACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIK-GKGLRIVSGAENIIIQNIAVTDINPK 148 (359)
T ss_dssp TTBCEEECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEE-SCCEEECTTCEEEEEESCEEEEECTT
T ss_pred cccccccccccccccccccCccccccccccccceEEeCCCceEEEecCCeEEe-cceEEEecCCCcEEEeCeEEEccccc
Confidence 458899999999999999997 8899998 899999999999997642
Q ss_pred CCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEe-eeCCceEEEEcceecc------------CCe
Q 013239 227 GNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDA-IMGSTAITVSNNYFTH------------HNE 293 (447)
Q Consensus 227 ~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi-~~gS~~ITISnn~f~~------------H~k 293 (447)
+. .++|+|+|++++|||||||+|+|+.||+++. ++++++||||||+|++ |+|
T Consensus 149 -----------~~----~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~ 213 (359)
T 1idk_A 149 -----------YV----WGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWA 213 (359)
T ss_dssp -----------EE----TSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCC
T ss_pred -----------cc----ccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccce
Confidence 22 3789999999999999999999999999997 7899999999999973 459
Q ss_pred eeEecCCCCccCCccceEEEEeeEecCCCcCCCceeccC-eEEEEcceeeCceeeeeecCCCceEEEeccEEeCCCCcc
Q 013239 294 VMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHG-YFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPENTF 371 (447)
Q Consensus 294 ~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~G-~~HvvNN~y~nw~~Yaigg~~~~~I~segN~F~a~~~~~ 371 (447)
+||+|++| +||||||||. ++.+||||+|+| ++||+||||++|.+|+++++.++++++|+|||++++++.
T Consensus 214 ~~L~G~sd--------~vT~hhN~f~-~~~~R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~ 283 (359)
T 1idk_A 214 IYLDGDAD--------LVTMKGNYIY-HTSGRSPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVL 283 (359)
T ss_dssp EEECCSSC--------EEEEESCEEE-SBCSCTTEECTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEE
T ss_pred EEEEecCC--------CeEEEceEee-cCcccCccccCCceEEEECCEEecccceEEeccCCcEEEEEccEEECCCCce
Confidence 99999986 8999999995 899999999998 699999999999999999999999999999999987764
No 11
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=100.00 E-value=2.5e-59 Score=476.02 Aligned_cols=217 Identities=27% Similarity=0.375 Sum_probs=195.3
Q ss_pred cccCcccccCccccCCCCeEEEEcCCCCCCCCCCCCcchhhhhcCCCCeEEEEeeceEEEeC------------------
Q 013239 118 LADCAIGFGRNAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQDRPLWIVFKRDMVITLK------------------ 179 (447)
Q Consensus 118 lA~~A~GFG~~ttGG~gG~vy~VT~~~D~~~~~~~pGtLR~Av~q~~P~~IVF~~~g~I~L~------------------ 179 (447)
++.+|+|||++||||++|++|+||+++| ||+||++++||+|+| +|+|++.
T Consensus 3 ~~~~a~Gfa~~tTGG~gg~~v~Vtt~~~----------L~~al~~~~prvIvv--~gtid~~g~~g~~~~~~c~~~~~~~ 70 (359)
T 1qcx_A 3 VVGAAEGFAHGVTGGGSASPVYPTTTDE----------LVSYLGDNEPRVIIL--DQTFDFTGTEGTETTTGCAPWGTAS 70 (359)
T ss_dssp CCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSST
T ss_pred cCCCcceeecCCcCCCCcceEEeCCHHH----------HHHHHcCCCCeEEEE--CcEEeeccccccccccccccccccc
Confidence 5678999999999999999999999999 999999999999996 3455531
Q ss_pred -------------------------------ceEEecCCcEEEccCceEEEecCceEEEe-ccccEEEEceEEEeccCCC
Q 013239 180 -------------------------------QELIMNSFKTIDGRGVNVHIANGACITIQ-FITNVIIHGINIHDCKPTG 227 (447)
Q Consensus 180 -------------------------------~~L~I~SnkTI~G~gA~~~I~~G~gi~i~-~a~NVIIRnL~i~~~~pg~ 227 (447)
.+|.|.|||||+|+|++++|. |.+|+|+ +++|||||||+||++.+.
T Consensus 71 ~~~~~i~~~~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~-G~gl~i~~~a~NVIIrnl~i~~~~~~- 148 (359)
T 1qcx_A 71 QCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIK-GKGLRVVSGAKNVIIQNIAVTDINPK- 148 (359)
T ss_dssp TBCEEECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEE-SCCEEEETTCCCEEEESCEEEEECTT-
T ss_pred cccceecccccccccccCCccceeeecccccceEEeCCCceEEecCCceEEe-cceEEEecCCCCEEEeCcEEEecCCc-
Confidence 358889999999999999997 8899998 999999999999987542
Q ss_pred CcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeE-EeeeCCceEEEEcceec-----------cC-Cee
Q 013239 228 NAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLI-DAIMGSTAITVSNNYFT-----------HH-NEV 294 (447)
Q Consensus 228 ~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGli-Di~~gS~~ITISnn~f~-----------~H-~k~ 294 (447)
+. .++|+|+|++++|||||||+|+|+.||++ |.++++++||||||+|+ +| +++
T Consensus 149 ----------~~----~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~ 214 (359)
T 1qcx_A 149 ----------YV----WGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGV 214 (359)
T ss_dssp ----------EE----TSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCE
T ss_pred ----------cc----ccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCccccccee
Confidence 22 36899999999999999999999999998 46779999999999997 34 689
Q ss_pred eEecCCCCccCCccceEEEEeeEecCCCcCCCceeccC-eEEEEcceeeCceeeeeecCCCceEEEeccEEeCCCCcc
Q 013239 295 MLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHG-YFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPENTF 371 (447)
Q Consensus 295 mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~G-~~HvvNN~y~nw~~Yaigg~~~~~I~segN~F~a~~~~~ 371 (447)
||+|++| ++||||||| .++.+||||+|++ ++|++||||++|.+|++++++++++++|||||+++++|.
T Consensus 215 ~l~G~sd--------~vT~~~N~f-~~~~~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~~~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 215 YLDGSND--------MVTLKGNYF-YNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp EECCSSE--------EEEEESCEE-ESBCSCTTEECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEE
T ss_pred EEecCCC--------CeehcccEe-ccCcccCceecCCceEEEEccEEECccCeEEecCCCceEEEEeeEEECCCccc
Confidence 9999986 899999999 5899999999985 799999999999999999999999999999999998774
No 12
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=98.52 E-value=9.8e-07 Score=96.99 Aligned_cols=148 Identities=18% Similarity=0.177 Sum_probs=99.7
Q ss_pred EEecCCcEEEccCceE----EEe---cCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeec-
Q 013239 182 LIMNSFKTIDGRGVNV----HIA---NGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFG- 253 (447)
Q Consensus 182 L~I~SnkTI~G~gA~~----~I~---~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~g- 253 (447)
+.|... ||+|+|..- ... .-..|.+..++||.|++|+|+++ |..+=.|.++. ..|+|.+++
T Consensus 108 ItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NS-p~~gI~I~np~---------~NDGid~DGi 176 (772)
T 3gqn_A 108 IFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDC-TLHGIDITCGG---------LDYPYLGDGT 176 (772)
T ss_dssp EEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESC-SSCSEEEECSS---------SSCCCCCTTC
T ss_pred EEEEee-EEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeC-CCCCEEEeCCC---------cCCcCCCcCc
Confidence 445333 899866420 000 01257889999999999999986 32222233211 016666666
Q ss_pred -----CceEEEEeeEeecCCCCeEEeeeCCceEEEEcceeccCC-----eeeEecCCCCccCCccceEEEEeeEecCCCc
Q 013239 254 -----SSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTHHN-----EVMLLGHSDSYTRDKVMQVTIAYNHFGEGLI 323 (447)
Q Consensus 254 -----s~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~H~-----k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~ 323 (447)
++||||++|.++...|..|.+ +.+.+|+|+||.+.++. .++-+|. +..+|+|.+|.|. ..
T Consensus 177 ~fdi~S~NV~I~Nc~I~ntGDDcIAI-ksSeNI~I~Nc~c~gphG~S~~~GIsIGs-------gs~NVtV~Nc~~~--nT 246 (772)
T 3gqn_A 177 TAPNPSENIWIENCEATGFGDDGITT-HHSQYINILNCYSHDPRLTANCNGFEIDD-------GSRHVVLSNNRSK--GC 246 (772)
T ss_dssp CCSSCCEEEEEESCEEESCSSCSEEE-CSCEEEEEESCEEECCSSSSSCCSEEECT-------TCEEEEEEEEEEE--SS
T ss_pred ccccccceEEEEeeEEEecCcCeEEe-cCCceEEEEeEEEECCCCCCCcccEEecC-------CcccEEEEceEEE--CC
Confidence 999999999999988888898 67999999999995432 3444442 2369999999993 35
Q ss_pred CCCceecc----C---eEEEEcceee-Cceeeeee
Q 013239 324 QRMPRCRH----G---YFHVVNNDYT-HWVMYAIG 350 (447)
Q Consensus 324 qR~Pr~R~----G---~~HvvNN~y~-nw~~Yaig 350 (447)
.|.=|++. + .+|+.||+.+ ++.+|.+.
T Consensus 247 ~nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir 281 (772)
T 3gqn_A 247 YGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFR 281 (772)
T ss_dssp SEEEEECCCTTSCCCEEEEEEEEEEESCSEEEEEC
T ss_pred CcEEEEEEeCCCCccccEEEECCEEeccCeEecce
Confidence 66666652 1 5788888875 45566554
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=98.50 E-value=9.5e-07 Score=95.27 Aligned_cols=148 Identities=18% Similarity=0.184 Sum_probs=99.7
Q ss_pred EEecCCcEEEccCce----EEEe---cCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeec-
Q 013239 182 LIMNSFKTIDGRGVN----VHIA---NGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFG- 253 (447)
Q Consensus 182 L~I~SnkTI~G~gA~----~~I~---~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~g- 253 (447)
+.|... ||+|+|.. .... .-..|.+..++||.|++|+|+++ |..+=.|.++. + .|+|.+++
T Consensus 108 ItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NS-p~~gI~I~~~~--~-------NDGid~DGi 176 (609)
T 3gq8_A 108 IFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDC-TLHGIDITCGG--L-------DYPYLGDGT 176 (609)
T ss_dssp EEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESC-SSCSEEEECSS--S-------SCCCCCTTC
T ss_pred EEEEee-EEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeC-CCCCeEEeCCC--C-------CccccCCCc
Confidence 445333 89985541 0000 01258889999999999999986 33222233221 0 16666666
Q ss_pred -----CceEEEEeeEeecCCCCeEEeeeCCceEEEEcceeccC-----CeeeEecCCCCccCCccceEEEEeeEecCCCc
Q 013239 254 -----SSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTHH-----NEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLI 323 (447)
Q Consensus 254 -----s~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~H-----~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~ 323 (447)
++||||++|.+....|..|.+ +.+.+|+|+||.+.++ ..++-+|. +..+|+|.+|.|. ..
T Consensus 177 ~fd~~S~NV~I~Nc~I~~tGDDcIaI-ksseNI~I~Nc~~~gp~G~S~~~GIsIGs-------gs~NVtV~Nc~i~--nt 246 (609)
T 3gq8_A 177 TAPNPSENIWIENCEATGFGDDGITT-HHSQYINILNCYSHDPRLTANCNGFEIDD-------GSRHVVLSNNRSK--GC 246 (609)
T ss_dssp CCSSCCEEEEEESCEEESCSSCSEEE-CSCEEEEEESCEEECCSSCSSCCSEEECT-------TCEEEEEESEEEE--SS
T ss_pred cccccceeEEEEeeEEEecCCCEEEe-cCCeeEEEEeEEEECCCCCCCcccEEccC-------CcccEEEEeeEEE--CC
Confidence 999999999999888888888 6799999999999543 23444442 2369999999993 35
Q ss_pred CCCceecc----C---eEEEEccee-eCceeeeee
Q 013239 324 QRMPRCRH----G---YFHVVNNDY-THWVMYAIG 350 (447)
Q Consensus 324 qR~Pr~R~----G---~~HvvNN~y-~nw~~Yaig 350 (447)
.|.-|++- + .+|+.||+. .++.+|.+.
T Consensus 247 ~~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn~r 281 (609)
T 3gq8_A 247 YGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFR 281 (609)
T ss_dssp SEEEEEEECTTSCCCEEEEEEEEEEESCSEEEEEE
T ss_pred CCEEEEEecCCCCccccEEEECCEeecCceEecce
Confidence 66666652 1 588999865 456666654
No 14
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.18 E-value=0.00018 Score=73.99 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=76.6
Q ss_pred CcchhhhhcCCCCe-EEEEeeceEEE--eC----ceEEe-c-----CCcEEEccC-ceEEEec----C------ceEEEe
Q 013239 153 PGTLRHAVIQDRPL-WIVFKRDMVIT--LK----QELIM-N-----SFKTIDGRG-VNVHIAN----G------ACITIQ 208 (447)
Q Consensus 153 pGtLR~Av~q~~P~-~IVF~~~g~I~--L~----~~L~I-~-----SnkTI~G~g-A~~~I~~----G------~gi~i~ 208 (447)
|-||.+|+.+-.|- +|++ ..|+.+ +. ..|.+ . ..+||.|.+ ..+.|.. | .+|.|
T Consensus 35 P~tiq~Ai~~a~pGdtI~l-~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~~g~~~vI~~~~~~g~~~~~~~~i~i- 112 (400)
T 1ru4_A 35 PMSFSAAMAAVNPGELILL-KPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAANCGRAVFDFSFPDSQWVQASYGFYV- 112 (400)
T ss_dssp CBCHHHHHHHCCTTCEEEE-CSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGGGCCEEEECCCCTTCCCTTCCSEEE-
T ss_pred CccHHHHHhhCCCCCEEEE-CCCeEccccccccceeEEecCCCCCCCCEEEEEecCCCCEEeCCccCCccccceeEEEE-
Confidence 44999999864443 3444 456776 43 33555 2 338888874 3455631 1 45777
Q ss_pred ccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEEccee
Q 013239 209 FITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYF 288 (447)
Q Consensus 209 ~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f 288 (447)
.++++.|++|+|++. ...||.+.+ +++.|++|.|....|.-|-+...+.+.+|.+|.+
T Consensus 113 ~~~~~~i~gl~I~n~---------------------g~~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i 170 (400)
T 1ru4_A 113 TGDYWYFKGVEVTRA---------------------GYQGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDA 170 (400)
T ss_dssp CSSCEEEESEEEESC---------------------SSCSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEE
T ss_pred ECCeEEEEeEEEEeC---------------------CCCcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEE
Confidence 689999999999852 123788877 6667888999888885556655555778888877
Q ss_pred cc
Q 013239 289 TH 290 (447)
Q Consensus 289 ~~ 290 (447)
.+
T Consensus 171 ~~ 172 (400)
T 1ru4_A 171 YR 172 (400)
T ss_dssp EC
T ss_pred Ec
Confidence 64
No 15
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=98.16 E-value=3.8e-05 Score=77.11 Aligned_cols=128 Identities=15% Similarity=0.131 Sum_probs=88.2
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceE
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAI 281 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~I 281 (447)
..+|.+..++||.|+|++|.... ++. + .....|||.+..++||+|.+|.++.+.| .|.++. +.+|
T Consensus 127 ~~~i~i~~~~nv~i~~~~I~~~~-~d~--------~----~~~ntDGid~~~s~nV~I~n~~i~~gDD-cIaiks-g~nI 191 (339)
T 1ia5_A 127 VQVFSVAGSDYLTLKDITIDNSD-GDD--------N----GGHNTDAFDIGTSTYVTISGATVYNQDD-CVAVNS-GENI 191 (339)
T ss_dssp SCCEEEESCEEEEEESCEEECGG-GTT--------T----TCCSCCSEEEESCEEEEEESCEEECSSC-SEEESS-EEEE
T ss_pred cceEEEecccCeEEeeEEEECCc-ccc--------c----cCCCCCcEEecCCceEEEEeeEEEcCCC-eEEEeC-CeEE
Confidence 46788889999999999998531 100 0 0135799999999999999999987655 578854 5999
Q ss_pred EEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc--C-eEEEEcceeeCceee
Q 013239 282 TVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH--G-YFHVVNNDYTHWVMY 347 (447)
Q Consensus 282 TISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~--G-~~HvvNN~y~nw~~Y 347 (447)
+|++|.+.... ++-||+-..+.....-+|+|.++.|. + ..+.-|++. | .-.+-|-.|.|..+.
T Consensus 192 ~i~n~~~~~gh-GisiGS~g~~~~~~v~nV~v~n~~~~-~-t~~girIKt~~g~~G~v~nI~~~ni~~~ 257 (339)
T 1ia5_A 192 YFSGGYCSGGH-GLSIGSVGGRSDNTVKNVTFVDSTII-N-SDNGVRIKTNIDTTGSVSDVTYKDITLT 257 (339)
T ss_dssp EEESCEEESSS-CEEEEEECSSSCCEEEEEEEEEEEEE-S-CSEEEEEEEETTCCCEEEEEEEEEEEEE
T ss_pred EEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEEE-C-CCcEEEEEEeCCCCcEEEeeEEEEEEEE
Confidence 99999998632 57777743333345679999999994 3 455555542 2 223444445554443
No 16
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.13 E-value=2.8e-05 Score=78.79 Aligned_cols=121 Identities=17% Similarity=0.140 Sum_probs=86.8
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeee-----
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIM----- 276 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~----- 276 (447)
..++.+..++||.|+|++|+... + ....|||.+.+++||+|.+|.|..+ |-.|.++.
T Consensus 174 ~~~i~~~~~~~v~i~~v~I~~~~--~---------------~~NtDGid~~~s~nV~I~n~~i~~g-DDcIaiks~~~~~ 235 (376)
T 1bhe_A 174 NFHVVFSDGDGFTAWKTTIKTPS--T---------------ARNTDGIDPMSSKNITIAYSNIATG-DDNVAIKAYKGRA 235 (376)
T ss_dssp SCSEEEESCEEEEEEEEEEECCT--T---------------CSSCCSEEEESCEEEEEESCEEECS-SCSEEEEECTTSC
T ss_pred cEEEEEeCCCcEEEEeEEEECCC--C---------------CCCCceEeecCCceEEEEeCEEecC-CCeEEEcccCCCC
Confidence 45788889999999999998521 0 1357999999999999999999866 55678873
Q ss_pred CCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc---CeEEEEcceeeCceee
Q 013239 277 GSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH---GYFHVVNNDYTHWVMY 347 (447)
Q Consensus 277 gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~---G~~HvvNN~y~nw~~Y 347 (447)
.+.+|+|++|.|.. ..++-||+... ...+|++.+|.|. + ..+.-|++. +...+-|-.|.|..|.
T Consensus 236 ~s~nI~I~n~~~~~-ghGisiGSe~~----~v~nV~v~n~~~~-~-t~~GirIKt~~g~~G~v~ni~f~ni~~~ 302 (376)
T 1bhe_A 236 ETRNISILHNDFGT-GHGMSIGSETM----GVYNVTVDDLKMN-G-TTNGLRIKSDKSAAGVVNGVRYSNVVMK 302 (376)
T ss_dssp CEEEEEEEEEEECS-SSCEEEEEEES----SEEEEEEEEEEEE-S-CSEEEEEECCTTTCCEEEEEEEEEEEEE
T ss_pred CceEEEEEeeEEEc-cccEEeccCCc----cEeeEEEEeeEEe-C-CCcEEEEEEecCCCceEeeEEEEeEEEe
Confidence 78999999999985 33466776322 4569999999993 4 345555542 2223445555555443
No 17
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=98.10 E-value=6.4e-05 Score=75.36 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=88.2
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceE
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAI 281 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~I 281 (447)
..+|.+..++||.|+|++|.... ++. + .....|||.+..++||+|.+|.++.+.| .|.++. +.+|
T Consensus 123 ~~~i~i~~~~nv~i~~~~I~~~~-~d~--------~----~~~ntDGid~~~s~nV~I~n~~i~~gDD-ciaiks-g~nI 187 (339)
T 2iq7_A 123 VQAFSINSATTLGVYDVIIDNSA-GDS--------A----GGHNTDAFDVGSSTGVYISGANVKNQDD-CLAINS-GTNI 187 (339)
T ss_dssp SCCEEEESCEEEEEESCEEECGG-GGG--------T----TCCSCCSEEEESCEEEEEESCEEECSSC-SEEESS-EEEE
T ss_pred cceEEEeccCCEEEEEEEEECCc-ccc--------c----cCCCCCcEEEcCcceEEEEecEEecCCC-EEEEcC-CccE
Confidence 46788889999999999998531 000 0 0135799999999999999999997655 568854 5999
Q ss_pred EEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc--C-eEEEEcceeeCceee
Q 013239 282 TVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH--G-YFHVVNNDYTHWVMY 347 (447)
Q Consensus 282 TISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~--G-~~HvvNN~y~nw~~Y 347 (447)
+|++|.|.... ++-||+-..+.....-+|+|.++.|. + ..+.-|++. | .-.+-|-.|.|..+.
T Consensus 188 ~i~n~~~~~gh-GisiGSlg~~~~~~v~nV~v~n~~~~-~-~~~girIkt~~g~~G~v~nI~~~ni~~~ 253 (339)
T 2iq7_A 188 TFTGGTCSGGH-GLSIGSVGGRSDNTVKTVTISNSKIV-N-SDNGVRIKTVSGATGSVSGVTYSGITLS 253 (339)
T ss_dssp EEESCEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEE-S-CSEEEEEEEETTCCCEEEEEEEEEEEEE
T ss_pred EEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEEE-C-CCcEEEEEEeCCCCeEEEEEEEEeEEcc
Confidence 99999998733 57777633233345679999999993 3 344455542 2 223444445554443
No 18
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=98.02 E-value=7.5e-05 Score=80.53 Aligned_cols=129 Identities=17% Similarity=0.116 Sum_probs=89.3
Q ss_pred CCCeEEEEeeceEEEeCceEEecCCcEEEccCceEEEecCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcc
Q 013239 163 DRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRT 242 (447)
Q Consensus 163 ~~P~~IVF~~~g~I~L~~~L~I~SnkTI~G~gA~~~I~~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~ 242 (447)
..|+-|.|...-.+.++ ++||.- + ...+|.+..++||.|+|++|.. ..
T Consensus 329 ~rP~~i~~~~~~nv~I~-------giti~n--s-----~~~~i~~~~~~nv~i~~v~i~~---~~--------------- 376 (608)
T 2uvf_A 329 RRSSLMTLRGVENVYLA-------GFTVRN--P-----AFHGIMNLENHNVVANGLIHQT---YD--------------- 376 (608)
T ss_dssp SSCCSEEEESEEEEEEE-------SCEEEC--C-----SSCSEEEESCEEEEEESCEEEC---TT---------------
T ss_pred CCCeEEEEEeeeeEEEe-------CcEEec--C-----CCCEEEEecCCCEEEeeEEEcC---CC---------------
Confidence 36777877654223222 234433 1 2567888899999999999863 10
Q ss_pred cCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeC----------CceEEEEcceeccCCeeeEecCCCCccCCccceEE
Q 013239 243 MADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMG----------STAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVT 312 (447)
Q Consensus 243 ~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~g----------S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VT 312 (447)
....|||.+.+++||+|++|.+..+ |..|.++.+ +.+|+|++|.|..-.-...+|+.. .....+|+
T Consensus 377 ~~NtDGidi~~s~nV~I~n~~i~~g-DD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~---~~~v~nI~ 452 (608)
T 2uvf_A 377 ANNGDGIEFGNSQNVMVFNNFFDTG-DDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHT---GAWIEDIL 452 (608)
T ss_dssp CTTCCSEEEESCEEEEEESCEEECS-SCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCC---TTCEEEEE
T ss_pred CCCCCeEEecCCceEEEEeeEEecC-CceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccC---CCCEEEEE
Confidence 1257999999999999999999875 667787544 689999999998633233478732 23456899
Q ss_pred EEeeEecCCCcCCCcee
Q 013239 313 IAYNHFGEGLIQRMPRC 329 (447)
Q Consensus 313 ihhN~F~~~~~qR~Pr~ 329 (447)
|.+|.|. +. .+.=|+
T Consensus 453 v~n~~~~-~t-~~GirI 467 (608)
T 2uvf_A 453 AENNVMY-LT-DIGLRA 467 (608)
T ss_dssp EESCEEE-SC-SEEEEE
T ss_pred EEeEEEE-CC-CceEEE
Confidence 9999994 43 344444
No 19
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=98.00 E-value=0.0002 Score=73.97 Aligned_cols=119 Identities=16% Similarity=0.175 Sum_probs=81.4
Q ss_pred ceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEE
Q 013239 203 ACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAIT 282 (447)
Q Consensus 203 ~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~IT 282 (447)
.+|.+..++||.|+|++|... + ....|||.+.. +||+|.+|.+..+ |..|.++.++.+|+
T Consensus 151 ~~i~i~~~~nv~I~n~~I~~~---d---------------~~ntDGidi~~-~nV~I~n~~i~~g-DD~Iai~s~~~nI~ 210 (422)
T 1rmg_A 151 FHFTMDTCSDGEVYNMAIRGG---N---------------EGGLDGIDVWG-SNIWVHDVEVTNK-DECVTVKSPANNIL 210 (422)
T ss_dssp CSEEEEEEEEEEEEEEEEECC---S---------------STTCCSEEEEE-EEEEEEEEEEESS-SEEEEEEEEEEEEE
T ss_pred eEEEEeCcCCEEEEeEEEECC---C---------------CCCCccEeecC-CeEEEEeeEEeCC-CCeEEeCCCCcCEE
Confidence 456666777777777777741 0 02579999999 9999999999865 66789987899999
Q ss_pred EEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc--CeEEEEcceeeCcee
Q 013239 283 VSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH--GYFHVVNNDYTHWVM 346 (447)
Q Consensus 283 ISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~--G~~HvvNN~y~nw~~ 346 (447)
|+||.+.... ++-||+-..+ ....+|+|.++.|. + ..+.=|++. |.-.+-|-.|.|..+
T Consensus 211 I~n~~~~~~~-GisIGS~g~~--~~v~nV~v~n~~~~-~-~~~Gi~Ikt~~g~G~v~nI~~~NI~~ 271 (422)
T 1rmg_A 211 VESIYCNWSG-GCAMGSLGAD--TDVTDIVYRNVYTW-S-SNQMYMIKSNGGSGTVSNVLLENFIG 271 (422)
T ss_dssp EEEEEEESSS-EEEEEEECTT--EEEEEEEEEEEEEE-S-SSCSEEEEEBBCCEEEEEEEEEEEEE
T ss_pred EEeEEEcCCc-ceeecccCCC--CcEEEEEEEeEEEe-c-cceEEEEEecCCCcEEEEEEEEeEEE
Confidence 9999988643 6777763211 13568999999993 3 344455542 333444444555443
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=98.00 E-value=6.8e-05 Score=78.21 Aligned_cols=121 Identities=21% Similarity=0.190 Sum_probs=87.2
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeC----
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMG---- 277 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~g---- 277 (447)
..++.+..++||.|+||+|... + ...|||.+.+++||.|++|.+.. .|..|.++.+
T Consensus 213 ~~~i~~~~~~nv~i~~v~I~~~--~-----------------~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~~~d 272 (448)
T 3jur_A 213 MWCIHPVLSENVIIRNIEISST--G-----------------PNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGRDAD 272 (448)
T ss_dssp SCSEEEESCEEEEEESCEEEEC--S-----------------TTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCCHHH
T ss_pred CceEeeeccCCEEEEeEEEeec--c-----------------CCCccccccCCcCEEEEeeEEEe-CCCcEEeccCcccc
Confidence 5678888999999999999852 1 25799999999999999999997 5777898766
Q ss_pred -------CceEEEEccee--ccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc--C-eEEEEcceeeCce
Q 013239 278 -------STAITVSNNYF--THHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH--G-YFHVVNNDYTHWV 345 (447)
Q Consensus 278 -------S~~ITISnn~f--~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~--G-~~HvvNN~y~nw~ 345 (447)
+.+|+|++|.+ ..-.-++-+|+.. .+..-+|+|.++.|. ..++.-|++- | .-.|-|=.|.|..
T Consensus 273 g~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~---~~~v~nV~v~n~~~~--~t~~GirIKt~~g~gG~v~nI~f~ni~ 347 (448)
T 3jur_A 273 GRRIGVPSEYILVRDNLVISQASHGGLVIGSEM---SGGVRNVVARNNVYM--NVERALRLKTNSRRGGYMENIFFIDNV 347 (448)
T ss_dssp HHHHCCCEEEEEEESCEEECSSCSEEEEECSSC---TTCEEEEEEESCEEE--SCSEEEEEECCTTTCSEEEEEEEESCE
T ss_pred ccccCCCceeEEEEEeEEecCCCcceEEECCcc---cCcEEEEEEEEEEEe--cccceEEEEEEcCCCceEeeEEEEEEE
Confidence 78999999999 3222366778642 235679999999993 3445555531 1 1234454555554
Q ss_pred ee
Q 013239 346 MY 347 (447)
Q Consensus 346 ~Y 347 (447)
+.
T Consensus 348 m~ 349 (448)
T 3jur_A 348 AV 349 (448)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 21
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.98 E-value=7.6e-05 Score=74.81 Aligned_cols=86 Identities=15% Similarity=0.230 Sum_probs=71.8
Q ss_pred eEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecC---------CCCeEEe
Q 013239 204 CITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNC---------ADGLIDA 274 (447)
Q Consensus 204 gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~---------~DGliDi 274 (447)
.|.+..++||.|++|+|++. ...+|.+.+++||.|+++++... .|| ||+
T Consensus 102 ~i~~~~~~nv~i~giti~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 159 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNT---------------------PVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDA-FDV 159 (339)
T ss_dssp CEEEEEEEEEEEECCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCS-EEE
T ss_pred EEEEeeeCcEEEEEEEEEeC---------------------CcceEEEeccCCEEEEEEEEECCccccccCCCCCc-EEE
Confidence 47888999999999999863 34779999999999999999863 677 688
Q ss_pred eeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecC
Q 013239 275 IMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGE 320 (447)
Q Consensus 275 ~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~ 320 (447)
..+++|+|++|.|...+...-++.+ .+|+|.++.+..
T Consensus 160 -~~s~nV~I~n~~i~~gDDciaiksg--------~nI~i~n~~~~~ 196 (339)
T 2iq7_A 160 -GSSTGVYISGANVKNQDDCLAINSG--------TNITFTGGTCSG 196 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEES
T ss_pred -cCcceEEEEecEEecCCCEEEEcCC--------ccEEEEeEEEEC
Confidence 6799999999999887777666653 389999999853
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.97 E-value=8.1e-05 Score=74.67 Aligned_cols=86 Identities=17% Similarity=0.257 Sum_probs=71.9
Q ss_pred eEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecC---------CCCeEEe
Q 013239 204 CITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNC---------ADGLIDA 274 (447)
Q Consensus 204 gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~---------~DGliDi 274 (447)
.|.+..++||.|++|+|++. ...+|.+.+++||.|++|++... .|| ||+
T Consensus 106 ~i~~~~~~nv~i~~i~i~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 163 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNS---------------------PVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA-FDI 163 (339)
T ss_dssp CEEEEEEEEEEEESCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCS-EEE
T ss_pred EEEEeecCcEEEEEEEEEcC---------------------CcceEEEecccCeEEeeEEEECCccccccCCCCCc-EEe
Confidence 47888999999999999863 34789999999999999999863 677 688
Q ss_pred eeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecC
Q 013239 275 IMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGE 320 (447)
Q Consensus 275 ~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~ 320 (447)
..+++|+|++|.|...+...-++.+ .+|+|.++.+..
T Consensus 164 -~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 200 (339)
T 1ia5_A 164 -GTSTYVTISGATVYNQDDCVAVNSG--------ENIYFSGGYCSG 200 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEES
T ss_pred -cCCceEEEEeeEEEcCCCeEEEeCC--------eEEEEEeEEEEC
Confidence 6799999999999987777777653 388999998853
No 23
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.97 E-value=0.00011 Score=73.70 Aligned_cols=128 Identities=17% Similarity=0.201 Sum_probs=87.5
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceE
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAI 281 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~I 281 (447)
..+|.+. ++||.|+|++|.... ++. . .....|||.+..++||.|.+|.+..+.| .|.++. ..+|
T Consensus 123 ~~~i~i~-~~nv~i~~~~I~~~~-~d~---~---------~~~ntDGidi~~s~nV~I~n~~i~~gDD-ciaiks-g~nI 186 (336)
T 1nhc_A 123 VQAISVQ-ATNVHLNDFTIDNSD-GDD---N---------GGHNTDGFDISESTGVYISGATVKNQDD-CIAINS-GESI 186 (336)
T ss_dssp SCCEEEE-EEEEEEESCEEECTT-HHH---H---------TCCSCCSEEECSCEEEEEESCEEESSSE-EEEESS-EEEE
T ss_pred ccEEEEE-eCCEEEEEEEEECCC-ccc---c---------cCCCCCcEEecCCCeEEEEeCEEEcCCC-EEEEeC-CeEE
Confidence 4578898 999999999998531 000 0 0135799999999999999999987655 668844 5999
Q ss_pred EEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc--C-eEEEEcceeeCceeee
Q 013239 282 TVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH--G-YFHVVNNDYTHWVMYA 348 (447)
Q Consensus 282 TISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~--G-~~HvvNN~y~nw~~Ya 348 (447)
+|++|.+.... ++-||+-..+.....-+|+|.++.|. + ..+.-|++. | .-.+-|-.|.|..+..
T Consensus 187 ~i~n~~~~~gh-GisiGS~g~~~~~~v~nV~v~n~~~~-~-t~~girIkt~~g~~G~v~nI~~~ni~~~~ 253 (336)
T 1nhc_A 187 SFTGGTCSGGH-GLSIGSVGGRDDNTVKNVTISDSTVS-N-SANGVRIKTIYKETGDVSEITYSNIQLSG 253 (336)
T ss_dssp EEESCEEESSS-EEEEEEESSSSCCEEEEEEEEEEEEE-S-CSEEEEEEEETTCCCEEEEEEEEEEEEEE
T ss_pred EEEeEEEECCc-CceEccCccccCCCEEEEEEEeeEEE-C-CCcEEEEEEECCCCCEEeeeEEeeEEeec
Confidence 99999998633 57778743333345679999999993 3 445555542 1 1234444555555443
No 24
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.90 E-value=0.00012 Score=73.29 Aligned_cols=84 Identities=18% Similarity=0.344 Sum_probs=70.6
Q ss_pred eEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecC---------CCCeEEe
Q 013239 204 CITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNC---------ADGLIDA 274 (447)
Q Consensus 204 gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~---------~DGliDi 274 (447)
.|.+..++||.|++|+|++. ..-+|.+. ++||.|+++++... .|| ||+
T Consensus 102 ~i~~~~~~nv~i~~i~i~ns---------------------p~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDG-idi 158 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNT---------------------PVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDG-FDI 158 (336)
T ss_dssp CEEEEEEEEEEEESCEEECC---------------------SSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCS-EEE
T ss_pred EEEEeeeCcEEEEEEEEEeC---------------------CccEEEEE-eCCEEEEEEEEECCCcccccCCCCCc-EEe
Confidence 47888999999999999963 12369999 99999999999874 688 698
Q ss_pred eeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEec
Q 013239 275 IMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFG 319 (447)
Q Consensus 275 ~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~ 319 (447)
..+++|+|++|.|...+...-++.+ .+|+|.++++.
T Consensus 159 -~~s~nV~I~n~~i~~gDDciaiksg--------~nI~i~n~~~~ 194 (336)
T 1nhc_A 159 -SESTGVYISGATVKNQDDCIAINSG--------ESISFTGGTCS 194 (336)
T ss_dssp -CSCEEEEEESCEEESSSEEEEESSE--------EEEEEESCEEE
T ss_pred -cCCCeEEEEeCEEEcCCCEEEEeCC--------eEEEEEeEEEE
Confidence 6799999999999988877777753 38899999885
No 25
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.89 E-value=0.00014 Score=72.36 Aligned_cols=154 Identities=9% Similarity=0.002 Sum_probs=95.6
Q ss_pred ccccEEEEceEEEeccCCCCcccccCCCCc--CC--cccCCCCeEEeecCceEEEEeeE-eecCCCCeEEeeeCCceEEE
Q 013239 209 FITNVIIHGINIHDCKPTGNAMVRSSPSHY--GW--RTMADGDAISIFGSSHIWIDHNS-LSNCADGLIDAIMGSTAITV 283 (447)
Q Consensus 209 ~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~--g~--r~~~d~DaIsI~gs~nVWIDHcS-~S~~~DGliDi~~gS~~ITI 283 (447)
.++|+.|++++|++.. +.+=.+..+.... .- -.....|+|.+..++++-|.+|. +....||. ++..++++++|
T Consensus 132 ~~~nv~I~~~~i~n~~-~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI-~~~~~s~~v~I 209 (377)
T 2pyg_A 132 ADRDVTIERVEVREMS-GYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGF-NVVTSTHDFVM 209 (377)
T ss_dssp CEEEEEEEEEEEECCS-SCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSE-EEETTCEEEEE
T ss_pred cccceEEEeEEEEecc-cceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcE-EEEeccCCeEE
Confidence 6788888888888652 1110110000000 00 00156799999999999999995 45556665 77677999999
Q ss_pred EcceeccCCee-eEe--cCCCCccCCccceEEEEeeEecCCCcCCCceecc-CeEEEEcceeeCceeeeeecCCCceEEE
Q 013239 284 SNNYFTHHNEV-MLL--GHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH-GYFHVVNNDYTHWVMYAIGGSANPTINS 359 (447)
Q Consensus 284 Snn~f~~H~k~-mLi--G~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~-G~~HvvNN~y~nw~~Yaigg~~~~~I~s 359 (447)
++|.+.+.... .++ |+.+. ....++++.+|.+. +...+-..+.. ..+.|.||.+++-..++|-......+.+
T Consensus 210 ~nN~i~~~~~g~~~~~~g~~~~---~~s~nv~i~~N~~~-~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g~~~~~i 285 (377)
T 2pyg_A 210 TNNVAYGNGSSGLVVQRGLEDL---ALPSNILIDGGAYY-DNAREGVLLKMTSDITLQNADIHGNGSSGVRVYGAQDVQI 285 (377)
T ss_dssp ESCEEESCSSCSEEEECCSSCC---CCCEEEEEESCEEE-SCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEEEEEEEE
T ss_pred ECCEEECccCceEEEeccccCC---CCCccEEEECCEEE-cCccCceEeccccCeEEECCEEECCCCceEEEecCCCcEE
Confidence 99999875443 333 33221 12347899999873 44444344433 4678889998875444443222356889
Q ss_pred eccEEeCCC
Q 013239 360 QGNRYLAPE 368 (447)
Q Consensus 360 egN~F~a~~ 368 (447)
++|.|....
T Consensus 286 ~~N~i~~n~ 294 (377)
T 2pyg_A 286 LDNQIHDNA 294 (377)
T ss_dssp ESCEEESCC
T ss_pred ECcEEECCc
Confidence 999998654
No 26
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.81 E-value=0.00033 Score=70.57 Aligned_cols=119 Identities=20% Similarity=0.243 Sum_probs=79.6
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceE
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAI 281 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~I 281 (447)
..+|.+..++||.|+|++|.... ++...+.+ + +.......|||.+..++||+|.+|.+... |..|.++. +++|
T Consensus 127 ~~~i~i~~~~nv~i~~~~I~~~~-~~~~~~~~--~--~~~~~~NtDGid~~~s~nV~I~n~~i~~g-DDcIaiks-g~nI 199 (349)
T 1hg8_A 127 VHCFDITGSSQLTISGLILDNRA-GDKPNAKS--G--SLPAAHNTDGFDISSSDHVTLDNNHVYNQ-DDCVAVTS-GTNI 199 (349)
T ss_dssp SEEEEEESCEEEEEEEEEEECGG-GSSCCTTT--T--TSCSCCSCCSEEEESCEEEEEEEEEEECS-SCSEEESS-EEEE
T ss_pred CceEEEeccCCEEEEEEEEECCC-Cccccccc--c--ccccCCCCCeEEEccccEEEEEeeEEecC-CCeEEeeC-CeEE
Confidence 56788889999999999998531 11000000 0 00001367999999999999999999965 55679854 6999
Q ss_pred EEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceec
Q 013239 282 TVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCR 330 (447)
Q Consensus 282 TISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R 330 (447)
+|++|.|.... ++-||+--.+......+|+|.++.|. + ..+.-|++
T Consensus 200 ~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~-~-~~~GirIK 245 (349)
T 1hg8_A 200 VVSNMYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVV-N-SQNGCRIK 245 (349)
T ss_dssp EEEEEEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEE-E-EEEEEEEE
T ss_pred EEEeEEEeCCc-ceEEccccccccCCEEEEEEEEEEEE-C-CCcEEEEE
Confidence 99999998532 56677631122344678999999993 3 34444553
No 27
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.80 E-value=0.00024 Score=72.02 Aligned_cols=110 Identities=14% Similarity=0.130 Sum_probs=79.3
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceE
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAI 281 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~I 281 (447)
..+|.+. ++||.|+|++|.... ++. .+ ....|||.+..++||+|.+|.+..+.| .|.++. ..+|
T Consensus 149 ~~~i~i~-~~nv~i~~~~I~~~~-~d~--------~~----~~NtDGidi~~s~nV~I~n~~i~~gDD-cIaiks-g~nI 212 (362)
T 1czf_A 149 LMAFSVQ-ANDITFTDVTINNAD-GDT--------QG----GHNTDAFDVGNSVGVNIIKPWVHNQDD-CLAVNS-GENI 212 (362)
T ss_dssp SCCEEEE-CSSEEEESCEEECGG-GGT--------TT----CCSCCSEEECSCEEEEEESCEEECSSC-SEEESS-EEEE
T ss_pred ccEEEEe-eCCEEEEEEEEECCc-ccc--------cc----CCCCCceeecCcceEEEEeeEEecCCC-EEEEeC-CeEE
Confidence 4678899 999999999998521 100 00 136799999999999999999997655 578854 4999
Q ss_pred EEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceec
Q 013239 282 TVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCR 330 (447)
Q Consensus 282 TISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R 330 (447)
+|++|.+.... ++-||+--.+.....-+|+|.++.|. + .++.-|++
T Consensus 213 ~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~-~-t~~GirIK 258 (362)
T 1czf_A 213 WFTGGTCIGGH-GLSIGSVGDRSNNVVKNVTIEHSTVS-N-SENAVRIK 258 (362)
T ss_dssp EEESCEEESSC-CEEEEEECSSSCCEEEEEEEEEEEEE-E-EEEEEEEE
T ss_pred EEEEEEEeCCc-eeEEeeccccCCCCEEEEEEEeeEEE-C-CceEEEEE
Confidence 99999999743 57787631112344668999999983 3 34555554
No 28
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.77 E-value=0.00079 Score=66.97 Aligned_cols=203 Identities=8% Similarity=0.023 Sum_probs=95.9
Q ss_pred hhhhhcC---CCCeEEEEeeceEEEeCc-------eEEecCCcEEEccCce-EEEe--cCc-----eEEEe----ccccE
Q 013239 156 LRHAVIQ---DRPLWIVFKRDMVITLKQ-------ELIMNSFKTIDGRGVN-VHIA--NGA-----CITIQ----FITNV 213 (447)
Q Consensus 156 LR~Av~q---~~P~~IVF~~~g~I~L~~-------~L~I~SnkTI~G~gA~-~~I~--~G~-----gi~i~----~a~NV 213 (447)
|+.|+.+ .++-+|+|-. |+..++. .|.+.+++||.|.|.. ..|. ++. ++... ...++
T Consensus 22 iq~Ai~~a~~~gg~~v~~p~-G~y~~~~~~~~~~g~l~~~~~v~l~g~g~~~t~l~~~~~~~~~~~~~~~~~~g~~~~~~ 100 (377)
T 2pyg_A 22 IQAAIDAAYAAGGGTVYLPA-GEYRVSAAGEPGDGCLMLKDGVYLAGAGMGETVIKLIDGSDQKITGMVRSAYGEETSNF 100 (377)
T ss_dssp HHHHHHHHHHTTSEEEEECS-EEEEECCCSSGGGCSEECCTTEEEEESSBTTEEEEECTTCBSCEEEEEECCTTSCCEEE
T ss_pred HHHHHHHHHhcCCCEEEECC-eEEEEcccccCCcccEEecCCeEEEEcCCCCcEEEecCCCccCccceEeccCCCcceEE
Confidence 6666654 3456777764 6777764 7888999999998743 3332 221 12121 12567
Q ss_pred EEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEEcceecc--C
Q 013239 214 IIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTH--H 291 (447)
Q Consensus 214 IIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~--H 291 (447)
-+++|+|.+......|.+ .||..... ...+.++++++|.+|++..+.---|.+...+.++++.||.+.. .
T Consensus 101 ~~~~~~I~G~~~~~~G~i------dGw~~~~~--~~~~~~~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~ 172 (377)
T 2pyg_A 101 GMRDLTLDGNRDNTSGKV------DGWFNGYI--PGGDGADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGL 172 (377)
T ss_dssp EEEEEEEECCGGGCBSCE------EEEEECSC--TTSSCCEEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSS
T ss_pred EEEEEEEECCCccCCccc------cceecccC--ccccccccceEEEeEEEEecccceEEeecccCCeEEEeEEeecCCC
Confidence 788888875321000111 01210000 0011245566666666655432233444444455555555521 0
Q ss_pred C-------eeeEecC-------CCCcc-CCccceEEEEeeEecCCCcCCCc-------eeccCeEEEEcceeeCceeeee
Q 013239 292 N-------EVMLLGH-------SDSYT-RDKVMQVTIAYNHFGEGLIQRMP-------RCRHGYFHVVNNDYTHWVMYAI 349 (447)
Q Consensus 292 ~-------k~mLiG~-------sD~~~-~d~~~~VTihhN~F~~~~~qR~P-------r~R~G~~HvvNN~y~nw~~Yai 349 (447)
+ +...+.+ .|.-. ......++|.+|.+..+...-.- ...-..++|.||..++-..|++
T Consensus 173 dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi 252 (377)
T 2pyg_A 173 DGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGV 252 (377)
T ss_dssp CSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSE
T ss_pred CceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCce
Confidence 0 0000100 00000 01133678888887432111110 0112356777887665333433
Q ss_pred ecCCCceEEEeccEEeCC
Q 013239 350 GGSANPTINSQGNRYLAP 367 (447)
Q Consensus 350 gg~~~~~I~segN~F~a~ 367 (447)
-...-..+.+++|.|...
T Consensus 253 ~~~~~~~v~i~~N~i~~~ 270 (377)
T 2pyg_A 253 LLKMTSDITLQNADIHGN 270 (377)
T ss_dssp EEEEEEEEEEESCEEESC
T ss_pred EeccccCeEEECCEEECC
Confidence 322234567788888764
No 29
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.76 E-value=0.0021 Score=65.02 Aligned_cols=137 Identities=13% Similarity=0.153 Sum_probs=92.5
Q ss_pred ceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeec-----CCCCeEEeeeC
Q 013239 203 ACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSN-----CADGLIDAIMG 277 (447)
Q Consensus 203 ~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~-----~~DGliDi~~g 277 (447)
..|.+.+++||.|++|+|++. ..-.+.+.+++||.|+++++.. -.||. |+ ..
T Consensus 152 ~~i~~~~~~nv~I~~iti~ns---------------------p~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGi-d~-~~ 208 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLINS---------------------PNFHVVFSDGDGFTAWKTTIKTPSTARNTDGI-DP-MS 208 (376)
T ss_dssp CSEEEESCEEEEEEEEEEECC---------------------SSCSEEEESCEEEEEEEEEEECCTTCSSCCSE-EE-ES
T ss_pred eEEEEEcceEEEEEeEEEECC---------------------CcEEEEEeCCCcEEEEeEEEECCCCCCCCceE-ee-cC
Confidence 368889999999999999963 1245788899999999999986 47775 88 67
Q ss_pred CceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceeccC-------eEEEEcceeeCceeeeee
Q 013239 278 STAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHG-------YFHVVNNDYTHWVMYAIG 350 (447)
Q Consensus 278 S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~G-------~~HvvNN~y~nw~~Yaig 350 (447)
+++|+|++|.|...+.+.-+.+... .....+|+|.+|+|..+. . +..| .+.|-|+.+.+-. +++.
T Consensus 209 s~nV~I~n~~i~~gDDcIaiks~~~--~~~s~nI~I~n~~~~~gh-G----isiGSe~~~v~nV~v~n~~~~~t~-~Gir 280 (376)
T 1bhe_A 209 SKNITIAYSNIATGDDNVAIKAYKG--RAETRNISILHNDFGTGH-G----MSIGSETMGVYNVTVDDLKMNGTT-NGLR 280 (376)
T ss_dssp CEEEEEESCEEECSSCSEEEEECTT--SCCEEEEEEEEEEECSSS-C----EEEEEEESSEEEEEEEEEEEESCS-EEEE
T ss_pred CceEEEEeCEEecCCCeEEEcccCC--CCCceEEEEEeeEEEccc-c----EEeccCCccEeeEEEEeeEEeCCC-cEEE
Confidence 9999999999998877766653110 112458999999995321 1 2222 4667777776631 2221
Q ss_pred --c---C--CCceEEEeccEEeCCCCc
Q 013239 351 --G---S--ANPTINSQGNRYLAPENT 370 (447)
Q Consensus 351 --g---~--~~~~I~segN~F~a~~~~ 370 (447)
. + .-..|.+++..+.....+
T Consensus 281 IKt~~g~~G~v~ni~f~ni~~~~v~~~ 307 (376)
T 1bhe_A 281 IKSDKSAAGVVNGVRYSNVVMKNVAKP 307 (376)
T ss_dssp EECCTTTCCEEEEEEEEEEEEESCSEE
T ss_pred EEEecCCCceEeeEEEEeEEEeCCCce
Confidence 1 1 112356666666655443
No 30
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.73 E-value=0.00016 Score=73.39 Aligned_cols=107 Identities=12% Similarity=0.158 Sum_probs=81.2
Q ss_pred EEecC--CcEEEccCceEEEec-------CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEee
Q 013239 182 LIMNS--FKTIDGRGVNVHIAN-------GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIF 252 (447)
Q Consensus 182 L~I~S--nkTI~G~gA~~~I~~-------G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~ 252 (447)
+.|.. .-||+|+|..-.=.. -..|.+.+++||.|++|++++. ..-+|.+.
T Consensus 97 v~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~ns---------------------p~~~i~i~ 155 (362)
T 1czf_A 97 ITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNT---------------------PLMAFSVQ 155 (362)
T ss_dssp CEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECC---------------------SSCCEEEE
T ss_pred EEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecC---------------------CccEEEEe
Confidence 45533 468888875310000 1247888999999999999963 12469999
Q ss_pred cCceEEEEeeEeecC---------CCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecC
Q 013239 253 GSSHIWIDHNSLSNC---------ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGE 320 (447)
Q Consensus 253 gs~nVWIDHcS~S~~---------~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~ 320 (447)
++||.|++|.+... .|| ||+ ..+++|+|++|.|...+...-++.+ .+|+|.++.+..
T Consensus 156 -~~nv~i~~~~I~~~~~d~~~~~NtDG-idi-~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 221 (362)
T 1czf_A 156 -ANDITFTDVTINNADGDTQGGHNTDA-FDV-GNSVGVNIIKPWVHNQDDCLAVNSG--------ENIWFTGGTCIG 221 (362)
T ss_dssp -CSSEEEESCEEECGGGGTTTCCSCCS-EEE-CSCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEES
T ss_pred -eCCEEEEEEEEECCccccccCCCCCc-eee-cCcceEEEEeeEEecCCCEEEEeCC--------eEEEEEEEEEeC
Confidence 99999999999862 677 688 6799999999999988877778764 389999999853
No 31
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.72 E-value=0.00051 Score=70.95 Aligned_cols=123 Identities=15% Similarity=0.096 Sum_probs=89.4
Q ss_pred ecCCcEEEccCceEE----EecCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEE
Q 013239 184 MNSFKTIDGRGVNVH----IANGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWI 259 (447)
Q Consensus 184 I~SnkTI~G~gA~~~----I~~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWI 259 (447)
|...-||+|+|..-. -. -..|.+..++||.|++|+|++. ...+|.+.+++||.|
T Consensus 106 i~G~G~IdG~G~~~w~~~~~r-p~~i~~~~~~nv~I~~iti~ns---------------------p~~~i~i~~~~nv~I 163 (422)
T 1rmg_A 106 STSKGAVQGFGYVYHAEGTYG-ARILRLTDVTHFSVHDIILVDA---------------------PAFHFTMDTCSDGEV 163 (422)
T ss_dssp SSSCCEEECCTHHHHTTTCCC-CEEEEEEEEEEEEEEEEEEECC---------------------SSCSEEEEEEEEEEE
T ss_pred eccCEEEECCcchhhcCCCCC-ceEEEEcccceEEEECeEEECC---------------------CceEEEEeCcCCEEE
Confidence 344568999985310 01 2357788999999999999963 235799999999999
Q ss_pred EeeEeec----CCCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc----
Q 013239 260 DHNSLSN----CADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH---- 331 (447)
Q Consensus 260 DHcS~S~----~~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~---- 331 (447)
++|.+.. ..|| ||+.. ++|+|++|.|...+.+.-+++ ...+|+|.+++|... + -++.
T Consensus 164 ~n~~I~~~d~~ntDG-idi~~--~nV~I~n~~i~~gDD~Iai~s-------~~~nI~I~n~~~~~~---~--GisIGS~g 228 (422)
T 1rmg_A 164 YNMAIRGGNEGGLDG-IDVWG--SNIWVHDVEVTNKDECVTVKS-------PANNILVESIYCNWS---G--GCAMGSLG 228 (422)
T ss_dssp EEEEEECCSSTTCCS-EEEEE--EEEEEEEEEEESSSEEEEEEE-------EEEEEEEEEEEEESS---S--EEEEEEEC
T ss_pred EeEEEECCCCCCCcc-EeecC--CeEEEEeeEEeCCCCeEEeCC-------CCcCEEEEeEEEcCC---c--ceeecccC
Confidence 9999987 4677 58854 899999999998877777775 124889999988432 2 2222
Q ss_pred --C---eEEEEcceeeC
Q 013239 332 --G---YFHVVNNDYTH 343 (447)
Q Consensus 332 --G---~~HvvNN~y~n 343 (447)
| .++|-|+.+.+
T Consensus 229 ~~~~v~nV~v~n~~~~~ 245 (422)
T 1rmg_A 229 ADTDVTDIVYRNVYTWS 245 (422)
T ss_dssp TTEEEEEEEEEEEEEES
T ss_pred CCCcEEEEEEEeEEEec
Confidence 1 35677777765
No 32
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=97.71 E-value=0.00044 Score=73.30 Aligned_cols=121 Identities=18% Similarity=0.206 Sum_probs=71.7
Q ss_pred chhhhhcCCCC-eEEEEeeceEEEeCceEEe------cCCcEEEccC-ceEEEecCceEEEeccccEEEEceEEEeccCC
Q 013239 155 TLRHAVIQDRP-LWIVFKRDMVITLKQELIM------NSFKTIDGRG-VNVHIANGACITIQFITNVIIHGINIHDCKPT 226 (447)
Q Consensus 155 tLR~Av~q~~P-~~IVF~~~g~I~L~~~L~I------~SnkTI~G~g-A~~~I~~G~gi~i~~a~NVIIRnL~i~~~~pg 226 (447)
+|++|+.+-.| -+|++. .|+-+ ...|.+ ...+||.|.+ ..+.|.++..|.|. +++|.|++|+|++...
T Consensus 33 ~Lq~Ai~~A~pGDtI~L~-~GtY~-~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i~-g~~v~i~GL~i~~~~~- 108 (506)
T 1dbg_A 33 TLYQVVKEVKPGGLVQIA-DGTYK-DVQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVELR-GEHLILEGIWFKDGNR- 108 (506)
T ss_dssp HHHHHHHHCCTTCEEEEC-SEEEE-TCEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEEC-SSSEEEESCEEEEECC-
T ss_pred HHHHHHHhCCCCCEEEEC-CCEEe-cceEEEecCCcCCCCEEEECCCCCccEEeCCceEEEE-cCCEEEECeEEECCCc-
Confidence 59999976443 334443 34544 124555 6678999974 24556534457774 7999999999998531
Q ss_pred CCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCe-EEee-------eCCceEEEEcceecc
Q 013239 227 GNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGL-IDAI-------MGSTAITVSNNYFTH 290 (447)
Q Consensus 227 ~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGl-iDi~-------~gS~~ITISnn~f~~ 290 (447)
.. ..++ ..+..++.+. ++++-|.+|.|....++. +-+. ..+.+.+|.+|.|..
T Consensus 109 --~~-------~~~~-~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 109 --AI-------QAWK-SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTD 169 (506)
T ss_dssp --CT-------TTCC-TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEEC
T ss_pred --ce-------eeee-cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEEC
Confidence 11 0111 0123456666 467778888888776661 1111 124455788888775
No 33
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.65 E-value=0.00085 Score=67.57 Aligned_cols=85 Identities=22% Similarity=0.289 Sum_probs=69.9
Q ss_pred eEEE-e-ccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecC--------------
Q 013239 204 CITI-Q-FITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNC-------------- 267 (447)
Q Consensus 204 gi~i-~-~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~-------------- 267 (447)
.|.+ . .++||.|++|+|++. ...+|.+.+++||.|+++++...
T Consensus 104 ~i~~~~~~~~nv~I~giti~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~ 162 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNW---------------------PVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPA 162 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECC---------------------SSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCS
T ss_pred EEEEeecCcCcEEEEEEEEEcC---------------------CCceEEEeccCCEEEEEEEEECCCCcccccccccccc
Confidence 5777 6 677999999999963 24679999999999999999863
Q ss_pred ---CCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEec
Q 013239 268 ---ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFG 319 (447)
Q Consensus 268 ---~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~ 319 (447)
.|| ||+ ..+++|+|.+|.|...+...-++.+ .+|+|.++++.
T Consensus 163 ~~NtDG-id~-~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~ 207 (349)
T 1hg8_A 163 AHNTDG-FDI-SSSDHVTLDNNHVYNQDDCVAVTSG--------TNIVVSNMYCS 207 (349)
T ss_dssp CCSCCS-EEE-ESCEEEEEEEEEEECSSCSEEESSE--------EEEEEEEEEEE
T ss_pred CCCCCe-EEE-ccccEEEEEeeEEecCCCeEEeeCC--------eEEEEEeEEEe
Confidence 566 588 6799999999999987777777654 38999999985
No 34
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.54 E-value=0.00081 Score=67.46 Aligned_cols=128 Identities=17% Similarity=0.197 Sum_probs=87.1
Q ss_pred CceEEEecccc-EEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCce
Q 013239 202 GACITIQFITN-VIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTA 280 (447)
Q Consensus 202 G~gi~i~~a~N-VIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ 280 (447)
..+|.+..++| |.|+||+|.... ++ . .. + ....|||.+ .++||+|.+|.++.. |..|.++.+ .+
T Consensus 119 ~~~i~i~~~~n~v~i~~v~I~~~~-~d-~--~~----~----~~NtDGidi-~s~nV~I~n~~i~~g-DDcIaiksg-~n 183 (335)
T 1k5c_A 119 AQAISVGPTDAHLTLDGITVDDFA-GD-T--KN----L----GHNTDGFDV-SANNVTIQNCIVKNQ-DDCIAINDG-NN 183 (335)
T ss_dssp SCCEEEEEEEEEEEEESCEEECGG-GG-G--GG----C----CCSCCSEEE-ECSSEEEESCEEESS-SCSEEEEEE-EE
T ss_pred cceEEEEccCCeEEEEEEEEECCC-Cc-c--cc----c----CCCCCeEcc-cCCeEEEEeeEEEcC-CCEEEeeCC-ee
Confidence 45688889999 999999998531 00 0 00 0 136799999 999999999999965 557899665 89
Q ss_pred EEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc---Ce-EEEEcceeeCceeeee
Q 013239 281 ITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH---GY-FHVVNNDYTHWVMYAI 349 (447)
Q Consensus 281 ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~---G~-~HvvNN~y~nw~~Yai 349 (447)
|+|+||.+.... ++-||+-.. ....-+|+|.++.|. + .++.-|++- +. -.+-|=.|.|..+..+
T Consensus 184 I~i~n~~~~~gh-GisIGS~g~--~~~v~nV~v~n~~~~-~-t~~girIKt~~g~~~G~v~nI~f~ni~~~~v 251 (335)
T 1k5c_A 184 IRFENNQCSGGH-GISIGSIAT--GKHVSNVVIKGNTVT-R-SMYGVRIKAQRTATSASVSGVTYDANTISGI 251 (335)
T ss_dssp EEEESCEEESSC-CEEEEEECT--TCEEEEEEEESCEEE-E-EEEEEEEEEETTCCSCEEEEEEEESCEEEEE
T ss_pred EEEEEEEEECCc-cCeEeeccC--CCCEEEEEEEeeEEE-C-CCceEEEEEeCCCCcceEeeeEEEEEEEEcc
Confidence 999999999732 467776421 234568899998883 3 445555541 22 3445555666655444
No 35
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.51 E-value=0.0007 Score=69.98 Aligned_cols=185 Identities=15% Similarity=0.092 Sum_probs=111.1
Q ss_pred eceEEEeCceEEe-cCCcEEEccCceEE---Ee-------------cCceEEEecc-----------------ccEEEEc
Q 013239 172 RDMVITLKQELIM-NSFKTIDGRGVNVH---IA-------------NGACITIQFI-----------------TNVIIHG 217 (447)
Q Consensus 172 ~~g~I~L~~~L~I-~SnkTI~G~gA~~~---I~-------------~G~gi~i~~a-----------------~NVIIRn 217 (447)
..|..+|+..+.| .|++||.|.+.+++ |. .|--|++..+ ++|.|++
T Consensus 63 ~~G~Y~l~g~ivIdkp~LtL~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~ 142 (410)
T 2inu_A 63 PPGDYDLHTQVVVDVSYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD 142 (410)
T ss_dssp CSEEEEECSCEEECCTTEEEECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES
T ss_pred CCCeeccCCcEEEecCcEEEEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC
Confidence 3578888888999 55599999874432 32 1223444443 8888888
Q ss_pred eEEEeccCCCCcccccCCCCcCCcccCCCCeEEeec-CceEEEEeeEeecCCCCeEEeeeCCceEEEEcceecc-CCeee
Q 013239 218 INIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFG-SSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTH-HNEVM 295 (447)
Q Consensus 218 L~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~g-s~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~-H~k~m 295 (447)
|.|++..-.+ .|-....+.-||.+.. ++++.|.+|.|....-|. .+ +++++++|.+|.+.+ -+-.-
T Consensus 143 v~I~G~~~~~----------~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI-~l-~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 143 FCLDGVGFTP----------GKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHAL-IV-RGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp CEEECCCCSS----------STTSCCCSCEEEEECSCEESCEEESCEEESCSEEE-EE-TTEESCEEESCEEESSSEEEE
T ss_pred EEEECCEeec----------CCCCcccCceeEEEeccCCeEEEECCEEecccEEE-EE-ccCCCcEEECCEEEecCCcee
Confidence 8888763111 1111234566788875 788999999999999887 66 889999999999994 23344
Q ss_pred EecCCCC---------ccCCc-cceEE-EEeeEecCCCcCCCceeccC-------eEEEEcceeeCce-eeeeecCCCce
Q 013239 296 LLGHSDS---------YTRDK-VMQVT-IAYNHFGEGLIQRMPRCRHG-------YFHVVNNDYTHWV-MYAIGGSANPT 356 (447)
Q Consensus 296 LiG~sD~---------~~~d~-~~~VT-ihhN~F~~~~~qR~Pr~R~G-------~~HvvNN~y~nw~-~Yaigg~~~~~ 356 (447)
|.|.+.. ...|+ ...+- ..+|++. + ....|+.|+| ...+.||.+.+.. .+.+-.+....
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~-~-N~i~~~~R~gIh~m~s~~~~i~~N~f~~~~~Gi~~M~s~~~~ 288 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVT-G-NNLFPRGRSLIEFTGCNRCSVTSNRLQGFYPGMLRLLNGCKE 288 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEESEESCEEE-S-CEECSCSSEEEEEESCBSCEEESCEEEESSSCSEEEESSCBS
T ss_pred eccccccceEecceeeecCCCCEEEEEeCCCCEEE-C-CCcccCcceEEEEEccCCCEEECCEEecceeEEEEEEcCCCC
Confidence 5562211 11222 12332 2334442 1 2223566755 2356777776532 22222223345
Q ss_pred EEEeccEEeCCCCc
Q 013239 357 INSQGNRYLAPENT 370 (447)
Q Consensus 357 I~segN~F~a~~~~ 370 (447)
..+++|.|......
T Consensus 289 n~v~~N~f~~~~~g 302 (410)
T 2inu_A 289 NLITANHIRRTNEG 302 (410)
T ss_dssp CEEESCEEEEECCC
T ss_pred CEEECCEEeccCCc
Confidence 78899999854443
No 36
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.36 E-value=0.0073 Score=61.05 Aligned_cols=137 Identities=22% Similarity=0.209 Sum_probs=86.3
Q ss_pred cCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeE-Ee-ecCceEEEEeeEeecCCCCeEEeee--
Q 013239 201 NGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAI-SI-FGSSHIWIDHNSLSNCADGLIDAIM-- 276 (447)
Q Consensus 201 ~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaI-sI-~gs~nVWIDHcS~S~~~DGliDi~~-- 276 (447)
+|-+|.+.+++||+|.|..|..+ .|++ .+ .++++|=|-+|.|+....+++--..
T Consensus 149 ~~DaI~i~~s~nVwIDHcs~s~~----------------------~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~ 206 (346)
T 1pxz_A 149 DGDAITMRNVTNAWIDHNSLSDC----------------------SDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDT 206 (346)
T ss_dssp CCCSEEEESCEEEEEESCEEECC----------------------SSEEEEEESSCEEEEEESCEEESEEEEEEESCCSS
T ss_pred CCCEEEEecCceEEEEeeEEecC----------------------CCCcEeeccCcceEEEEeeEEecCCceeEECCCCc
Confidence 35578888999999999999853 3565 56 4789999999999875444333211
Q ss_pred ----CCceEEEEcceeccCCee--eEecCCCCccCCccceEEEEeeEecCCCcCCCceecc-CeEEEEcceeeCcee---
Q 013239 277 ----GSTAITVSNNYFTHHNEV--MLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH-GYFHVVNNDYTHWVM--- 346 (447)
Q Consensus 277 ----gS~~ITISnn~f~~H~k~--mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~-G~~HvvNN~y~nw~~--- 346 (447)
....||+-+|+|.+|... -.+. ..++.+.+|+| .+.....=-.+. ..+-+.||||.+-..
T Consensus 207 ~~~d~~~~vT~~~N~f~~~~~~R~Pr~r---------~g~~hv~NN~~-~~~~~~~i~~~~~~~i~~egN~F~~~~~~~~ 276 (346)
T 1pxz_A 207 YDDDKSMKVTVAFNQFGPNAGQRMPRAR---------YGLVHVANNNY-DPWNIYAIGGSSNPTILSEGNSFTAPSESYK 276 (346)
T ss_dssp CGGGGGCEEEEESCEECSSEEECTTEEE---------SSEEEEESCEE-CCCSSCSEEEESCCEEEEESCEEECCSCGGG
T ss_pred cccCCceEEEEEeeEEeCCccccCccEe---------cceEEEEeeEE-EcccceEEeccCCceEEEECCEEECCCCCcc
Confidence 123899999999433211 1121 12788999999 444433322232 478899999987321
Q ss_pred ----eeeecC-----CCceEEEeccEEeCCCC
Q 013239 347 ----YAIGGS-----ANPTINSQGNRYLAPEN 369 (447)
Q Consensus 347 ----Yaigg~-----~~~~I~segN~F~a~~~ 369 (447)
+-+... .+-...++++.|.++.-
T Consensus 277 k~v~~~~~~~~~~~~~~~~~~~~g~~~~nG~~ 308 (346)
T 1pxz_A 277 KEVTKRIGCESPSACANWVWRSTRDAFINGAY 308 (346)
T ss_dssp CBSEEECSCSCHHHHTTSCEEEESCEEETTCB
T ss_pred cccEEEeccCCccccccccEecCCCeEEeceE
Confidence 111111 12246678888888753
No 37
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.34 E-value=0.011 Score=63.71 Aligned_cols=139 Identities=14% Similarity=0.086 Sum_probs=92.6
Q ss_pred eEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeec----CCCCeEEeeeCCc
Q 013239 204 CITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSN----CADGLIDAIMGST 279 (447)
Q Consensus 204 gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~----~~DGliDi~~gS~ 279 (447)
.|.+.+++||.|++|+|++. ..=+|.+.+++||.|+++.+.. -.|| ||+ ..++
T Consensus 333 ~i~~~~~~nv~I~giti~ns---------------------~~~~i~~~~~~nv~i~~v~i~~~~~~NtDG-idi-~~s~ 389 (608)
T 2uvf_A 333 LMTLRGVENVYLAGFTVRNP---------------------AFHGIMNLENHNVVANGLIHQTYDANNGDG-IEF-GNSQ 389 (608)
T ss_dssp SEEEESEEEEEEESCEEECC---------------------SSCSEEEESCEEEEEESCEEECTTCTTCCS-EEE-ESCE
T ss_pred EEEEEeeeeEEEeCcEEecC---------------------CCCEEEEecCCCEEEeeEEEcCCCCCCCCe-EEe-cCCc
Confidence 47888999999999999963 2346888999999999999864 3677 488 6799
Q ss_pred eEEEEcceeccCCeeeEecCC-CCccC--CccceEEEEeeEecCCCcCCCceec----cC--eEEEEcceeeCce-eeee
Q 013239 280 AITVSNNYFTHHNEVMLLGHS-DSYTR--DKVMQVTIAYNHFGEGLIQRMPRCR----HG--YFHVVNNDYTHWV-MYAI 349 (447)
Q Consensus 280 ~ITISnn~f~~H~k~mLiG~s-D~~~~--d~~~~VTihhN~F~~~~~qR~Pr~R----~G--~~HvvNN~y~nw~-~Yai 349 (447)
+|+|++|.|...+.+.-+.+. +.+.. ...-+|+|.+|+|..+. .- =.+. .| .++|.|+.+.+-. +..|
T Consensus 390 nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~gh-g~-~~iGS~~~~~v~nI~v~n~~~~~t~~GirI 467 (608)
T 2uvf_A 390 NVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGH-GA-IVTGSHTGAWIEDILAENNVMYLTDIGLRA 467 (608)
T ss_dssp EEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSS-CS-EEEESCCTTCEEEEEEESCEEESCSEEEEE
T ss_pred eEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCC-Ce-EEEcccCCCCEEEEEEEeEEEECCCceEEE
Confidence 999999999988877666432 21111 12358999999985321 11 0011 12 3788899988741 2222
Q ss_pred e---cCCC--ceEEEeccEEeCC
Q 013239 350 G---GSAN--PTINSQGNRYLAP 367 (447)
Q Consensus 350 g---g~~~--~~I~segN~F~a~ 367 (447)
. ++.+ ..|.++++.+...
T Consensus 468 Kt~~g~gG~v~nI~~~ni~m~~v 490 (608)
T 2uvf_A 468 KSTSTIGGGARNVTFRNNAMRDL 490 (608)
T ss_dssp EEETTTCCEEEEEEEEEEEEEEE
T ss_pred eeecCCCceEECcEEEeeEEEcc
Confidence 2 1111 3466777766654
No 38
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.28 E-value=0.018 Score=58.23 Aligned_cols=137 Identities=13% Similarity=0.108 Sum_probs=85.7
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEeeeC--
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDAIMG-- 277 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi~~g-- 277 (447)
|-+|.+.+++||+|.|..|..+ .|+ |.+. ++++|=|-+|-|....-.++--..+
T Consensus 116 ~DaI~i~~s~nVWIDHcs~s~~----------------------~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~ 173 (340)
T 3zsc_A 116 FDYINVENSHHIWIDHITFVNG----------------------NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKE 173 (340)
T ss_dssp CCSEEEESCEEEEEESCEEESC----------------------SSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTS
T ss_pred CCeEEEecCCcEEEEeeeeccC----------------------CccceEEecCCceEEEECcEeccCceeeEeCcCCCC
Confidence 4568888999999999999853 233 5565 6889999999998765555432111
Q ss_pred -------CceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCC----------CcCCCceecc-CeEEEEcc
Q 013239 278 -------STAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEG----------LIQRMPRCRH-GYFHVVNN 339 (447)
Q Consensus 278 -------S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~----------~~qR~Pr~R~-G~~HvvNN 339 (447)
...||+-+|+|.++. +..+.- +.-++-+.+|+|. + ...-.--.+. +++-+-||
T Consensus 174 ~~~~d~g~~~vT~hhN~f~~~~-----~R~Pr~---r~G~~Hv~NN~~~-n~~~~~~~~~~~~~yai~~~~~a~i~~E~N 244 (340)
T 3zsc_A 174 DPEQAGQAYKVTYHHNYFKNLI-----QRMPRI---RFGMAHVFNNFYS-MGLRTGVSGNVFPIYGVASAMGAKVHVEGN 244 (340)
T ss_dssp CHHHHHHSCEEEEESCEEESCC-----BCTTEE---ESSEEEEESCEEE-CCCCCSCSSCCSCCEEEEEETTCEEEEESC
T ss_pred ccccccCCcEEEEECeEecCCC-----CCCCcc---cCCeEEEEccEEE-CCccccccccceeeeeEecCCCCEEEEECc
Confidence 138999999997542 111100 1126788899994 4 1111111222 57899999
Q ss_pred eeeCcee--------eeee---cCCCceEEEec----cEEeCCCC
Q 013239 340 DYTHWVM--------YAIG---GSANPTINSQG----NRYLAPEN 369 (447)
Q Consensus 340 ~y~nw~~--------Yaig---g~~~~~I~seg----N~F~a~~~ 369 (447)
||.+... +.+. +.....+...+ |.|.....
T Consensus 245 ~F~~~~~~~~~~~~~~p~~~~~~~~~G~~~~~~~~~~n~~~~~~~ 289 (340)
T 3zsc_A 245 YFMGYGAVMAEAGIAFLPTRIMGPVEGYLTLGEGDAKNEFYYCKE 289 (340)
T ss_dssp EEECSCHHHHHTTCCBEEEEECTTTBCEEEECCGGGCCEEESBCC
T ss_pred EEECCCcccccccccccccccCCCCceEEEecCcccceeeccCCC
Confidence 9998532 1222 22334566677 78876544
No 39
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.24 E-value=0.0028 Score=69.97 Aligned_cols=89 Identities=16% Similarity=0.012 Sum_probs=65.8
Q ss_pred ccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCC----CCeEEeeeCCceEEEE
Q 013239 209 FITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCA----DGLIDAIMGSTAITVS 284 (447)
Q Consensus 209 ~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~----DGliDi~~gS~~ITIS 284 (447)
.++||.|+|-+|++ .+.|+|.|.+++||+|.+|.+.... ..-|.+..++.+|||+
T Consensus 181 ~S~NV~I~Nc~I~n---------------------tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~ 239 (772)
T 3gqn_A 181 PSENIWIENCEATG---------------------FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLS 239 (772)
T ss_dssp CCEEEEEESCEEES---------------------CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEE
T ss_pred ccceEEEEeeEEEe---------------------cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEE
Confidence 38999999999874 2569999999999999999995432 3346776667999999
Q ss_pred cceeccCCeeeEecCCCCccCCccceEEEEeeEecC
Q 013239 285 NNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGE 320 (447)
Q Consensus 285 nn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~ 320 (447)
||.|.+...+.-|-..... ....+|.|..|+..+
T Consensus 240 Nc~~~nT~nGIRIKt~~~g--g~v~NV~I~gnis~~ 273 (772)
T 3gqn_A 240 NNRSKGCYGGIEIKAHGDA--PAAYNISINGHMSVE 273 (772)
T ss_dssp EEEEESSSEEEEECCCTTS--CCCEEEEEEEEEEES
T ss_pred ceEEECCCcEEEEEEeCCC--CccccEEEECCEEec
Confidence 9999998887766532211 124577777777643
No 40
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.24 E-value=0.0042 Score=64.74 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=71.2
Q ss_pred eEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeec---CCCCeEEeeeCCce
Q 013239 204 CITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSN---CADGLIDAIMGSTA 280 (447)
Q Consensus 204 gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~---~~DGliDi~~gS~~ 280 (447)
.|.+.+++||.|++|++++. ..=.|.+..++||.|+++++.. -.||. |+ ..+++
T Consensus 192 ~i~~~~~~nv~i~giti~ns---------------------p~~~i~~~~~~nv~i~~v~I~~~~~NtDGi-di-~~s~n 248 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINS---------------------PMWCIHPVLSENVIIRNIEISSTGPNNDGI-DP-ESCKY 248 (448)
T ss_dssp SEEEESCEEEEEESCEEESC---------------------SSCSEEEESCEEEEEESCEEEECSTTCCSB-CC-BSCEE
T ss_pred EEEEEcccceEEEeeEEEeC---------------------CCceEeeeccCCEEEEeEEEeeccCCCccc-cc-cCCcC
Confidence 57888999999999999963 1236888999999999999986 57887 87 56899
Q ss_pred EEEEcceeccCCeeeEecCCCC-ccC---CccceEEEEeeEe
Q 013239 281 ITVSNNYFTHHNEVMLLGHSDS-YTR---DKVMQVTIAYNHF 318 (447)
Q Consensus 281 ITISnn~f~~H~k~mLiG~sD~-~~~---d~~~~VTihhN~F 318 (447)
|+|++|.|...+.+.-+.+... +.. ...-+|+|.++++
T Consensus 249 V~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~ 290 (448)
T 3jur_A 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLV 290 (448)
T ss_dssp EEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEE
T ss_pred EEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEE
Confidence 9999999998888777765421 100 0134788888877
No 41
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.23 E-value=0.0042 Score=67.15 Aligned_cols=89 Identities=16% Similarity=0.026 Sum_probs=65.5
Q ss_pred cccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCC----CCeEEeeeCCceEEEEc
Q 013239 210 ITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCA----DGLIDAIMGSTAITVSN 285 (447)
Q Consensus 210 a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~----DGliDi~~gS~~ITISn 285 (447)
++||.|+|-+|++ .+.|+|.|.+++||+|.+|.+.... ..-|.+..++.+|||++
T Consensus 182 S~NV~I~Nc~I~~---------------------tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~N 240 (609)
T 3gq8_A 182 SENIWIENCEATG---------------------FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSN 240 (609)
T ss_dssp CEEEEEESCEEES---------------------CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEES
T ss_pred ceeEEEEeeEEEe---------------------cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEe
Confidence 7999999999874 2569999999999999999995432 23457756678999999
Q ss_pred ceeccCCeeeEecCCCCccCCccceEEEEeeEecCC
Q 013239 286 NYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEG 321 (447)
Q Consensus 286 n~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~ 321 (447)
|.|.+...+.-|-..+.. .....|.|..|++.++
T Consensus 241 c~i~nt~~GIrIKt~~~~--~~v~NV~I~n~vs~~n 274 (609)
T 3gq8_A 241 NRSKGCYGGIEIKAHGDA--PAAYNISINGHMSVED 274 (609)
T ss_dssp EEEESSSEEEEEEECTTS--CCCEEEEEEEEEEESC
T ss_pred eEEECCCCEEEEEecCCC--CccccEEEECCEeecC
Confidence 999998877656433211 1245778877766443
No 42
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.21 E-value=0.0047 Score=62.74 Aligned_cols=113 Identities=15% Similarity=0.222 Sum_probs=70.3
Q ss_pred CCeEEee-cCceEEEEeeEeecC-------CCCeEEeeeCCceEEEEcceeccCCeeeE-ecCCCCccCCccceEEEEee
Q 013239 246 GDAISIF-GSSHIWIDHNSLSNC-------ADGLIDAIMGSTAITVSNNYFTHHNEVML-LGHSDSYTRDKVMQVTIAYN 316 (447)
Q Consensus 246 ~DaIsI~-gs~nVWIDHcS~S~~-------~DGliDi~~gS~~ITISnn~f~~H~k~mL-iG~sD~~~~d~~~~VTihhN 316 (447)
+.+|.|. +++||+|-++.|..+ .|+ |.+ .++++|-|-+|.|..-...++ .|. .....|||-+|
T Consensus 123 G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~Da-I~i-~~s~nvwIDHcs~s~~~d~~~~~~~------~~s~~vTISnn 194 (359)
T 1qcx_A 123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDA-ITV-DDSDLVWIDHVTTARIGRQHIVLGT------SADNRVTISYS 194 (359)
T ss_dssp SCCEEEETTCCCEEEESCEEEEECTTEETSCCS-EEE-ESCCCEEEESCEEEEESSCSEEECS------SCCEEEEEESC
T ss_pred cceEEEecCCCCEEEeCcEEEecCCcccccCce-eEe-cCCceEEEEeeEeeccCcCceeecc------cccccEEEECc
Confidence 4579998 899999999999864 344 456 578999999998885332222 221 12348999999
Q ss_pred EecCCCcCCCceec---------cC---eEEEEcceeeCceeeeeecCCCceEEEeccEEeCC
Q 013239 317 HFGEGLIQRMPRCR---------HG---YFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAP 367 (447)
Q Consensus 317 ~F~~~~~qR~Pr~R---------~G---~~HvvNN~y~nw~~Yaigg~~~~~I~segN~F~a~ 367 (447)
+|.. ......+++ .| .+-+.+|+|.+-....--...+..+.+.||||...
T Consensus 195 ~f~~-~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r~~~~~hv~NN~~~n~ 256 (359)
T 1qcx_A 195 LIDG-RSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNF 256 (359)
T ss_dssp EEEC-BCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEECSSEEEEEESCEEEEE
T ss_pred EecC-CccccccCcccccceeEEecCCCCeehcccEeccCcccCceecCCceEEEEccEEECc
Confidence 9953 222111111 12 46677888876432111111123578899999763
No 43
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=97.15 E-value=0.005 Score=64.60 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=68.0
Q ss_pred eEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCe--EEeeeCCceE
Q 013239 204 CITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGL--IDAIMGSTAI 281 (447)
Q Consensus 204 gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGl--iDi~~gS~~I 281 (447)
.|.+..++||.|++|+|.+... +..+ ..++ ..+.|||.+ .++||+|.+|.+....|+. .+. .++.+|
T Consensus 134 ~i~~~~~~Nv~I~gIti~n~w~-----ih~s-~~V~---i~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~-~~~~NV 202 (464)
T 1h80_A 134 VFKLGDVRNYKISNFTIDDNKT-----IFAS-ILVD---VTERNGRLH-WSRNGIIERIKQNNALFGYGLIQT-YGADNI 202 (464)
T ss_dssp EEEECSEEEEEEEEEEEECCSC-----BSCS-EEEC---EEEETTEEE-EEEEEEEEEEEEESCCTTCEEEEE-SEEEEE
T ss_pred EEEEEeeccEEEeeeEEeccce-----Eeec-eeee---eecCCCcee-eccCEEEeceEEecCCCeEEeccc-CCEeEE
Confidence 4677899999999999987321 1100 0011 124577777 8899999999999987654 343 678999
Q ss_pred EEEcceeccCCeeeEecCCCC----ccCCccceEEEEeeEe
Q 013239 282 TVSNNYFTHHNEVMLLGHSDS----YTRDKVMQVTIAYNHF 318 (447)
Q Consensus 282 TISnn~f~~H~k~mLiG~sD~----~~~d~~~~VTihhN~F 318 (447)
+|++|.|.. ..++-+...+. ......-+|+|.++.|
T Consensus 203 ~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 203 LFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp EEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred EEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 999999987 44433332210 0112345788888888
No 44
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=96.96 E-value=0.0076 Score=64.81 Aligned_cols=64 Identities=19% Similarity=0.200 Sum_probs=50.8
Q ss_pred CCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEEcceec-cCCee-eEecCCCCccCCccceEEEEeeEe
Q 013239 246 GDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFT-HHNEV-MLLGHSDSYTRDKVMQVTIAYNHF 318 (447)
Q Consensus 246 ~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~-~H~k~-mLiG~sD~~~~d~~~~VTihhN~F 318 (447)
.|||.+. +||.|.+|.|..+.| +|.++ +.+|+|+||.+. .|..+ +-+|.+. ...-+|+|.+..+
T Consensus 375 TDGIDi~--~NV~I~nc~I~~gDD-cIaIk--s~NI~I~nc~i~~g~g~g~IsIGS~~----g~V~NV~v~N~~i 440 (574)
T 1ogo_X 375 TDGPEIY--PNSVVHDVFWHVNDD-AIKIY--YSGASVSRATIWKCHNDPIIQMGWTS----RDISGVTIDTLNV 440 (574)
T ss_dssp CCCCBCC--TTCEEEEEEEEESSC-SEECC--STTCEEEEEEEEECSSSCSEECCSSC----CCEEEEEEEEEEE
T ss_pred CccCccc--CCEEEEeeEEECCCC-EEEEC--CccEEEEeEEEECCCCCceEEEcCCC----CcEEEEEEEeEEE
Confidence 7999998 999999999999988 66774 399999999986 46555 6788732 3345788887777
No 45
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=96.86 E-value=0.0042 Score=62.27 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=79.0
Q ss_pred eEEecC-CcEEEccCceEE--Ee-c-----CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEe
Q 013239 181 ELIMNS-FKTIDGRGVNVH--IA-N-----GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISI 251 (447)
Q Consensus 181 ~L~I~S-nkTI~G~gA~~~--I~-~-----G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI 251 (447)
.+.|.. .=||+|+|+.-. .. . -..|.+..++ |.|++|++++. ....|.+
T Consensus 67 ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~ns---------------------p~~~i~i 124 (335)
T 1k5c_A 67 GINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNS---------------------PAQAISV 124 (335)
T ss_dssp EEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESC---------------------SSCCEEE
T ss_pred CEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECC---------------------CcceEEE
Confidence 455644 458999875310 00 0 1236777888 99999999963 2356999
Q ss_pred ecCce-EEEEeeEeecC----------CCCeEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecC
Q 013239 252 FGSSH-IWIDHNSLSNC----------ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGE 320 (447)
Q Consensus 252 ~gs~n-VWIDHcS~S~~----------~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~ 320 (447)
.+++| |.|+++.+... .|| ||+ .+++|+|++|.|...+...-++.+ .+|+|.++.+..
T Consensus 125 ~~~~n~v~i~~v~I~~~~~d~~~~~~NtDG-idi--~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 193 (335)
T 1k5c_A 125 GPTDAHLTLDGITVDDFAGDTKNLGHNTDG-FDV--SANNVTIQNCIVKNQDDCIAINDG--------NNIRFENNQCSG 193 (335)
T ss_dssp EEEEEEEEEESCEEECGGGGGGGCCCSCCS-EEE--ECSSEEEESCEEESSSCSEEEEEE--------EEEEEESCEEES
T ss_pred EccCCeEEEEEEEEECCCCcccccCCCCCe-Ecc--cCCeEEEEeeEEEcCCCEEEeeCC--------eeEEEEEEEEEC
Confidence 99999 99999999763 566 488 699999999999988777777653 388999988853
No 46
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.69 E-value=0.039 Score=55.42 Aligned_cols=146 Identities=19% Similarity=0.208 Sum_probs=89.6
Q ss_pred CceEEEec-cccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEeeeC-
Q 013239 202 GACITIQF-ITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDAIMG- 277 (447)
Q Consensus 202 G~gi~i~~-a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi~~g- 277 (447)
|-+|.+.. ++||+|.|..|....++.. + ....|+ +.+. ++++|=|-+|-|....-++|--..+
T Consensus 120 ~DaI~i~~~s~nVWIDH~s~s~~~~g~~----------~---~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~ 186 (326)
T 3vmv_A 120 GTAIEVTDDSKNVWIDHNEFYSEFPGNG----------D---SDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDN 186 (326)
T ss_dssp SCSEEEETTCEEEEEESCEEECCSSTTS----------C---TTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSC
T ss_pred CCeEEEecCCCcEEEEeeEEeccccCCc----------C---ccccCcceEecCCCceEEEEceEEecCceEEEECCCCC
Confidence 45688886 8999999999986543211 0 112343 4554 5788888888888654444332111
Q ss_pred ----CceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc-CeEEEEcceeeCce-------
Q 013239 278 ----STAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH-GYFHVVNNDYTHWV------- 345 (447)
Q Consensus 278 ----S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~-G~~HvvNN~y~nw~------- 345 (447)
...||+-+|+|.+.. +..+.- +.-++-+.+|+| .+.....-..+. +++-+-||||.+-.
T Consensus 187 ~~~~~~~vT~~~N~f~~~~-----~R~Pr~---r~G~~Hv~NN~~-~n~~~~~~~~~~~a~v~~e~N~F~~~~~~~~~~~ 257 (326)
T 3vmv_A 187 ASLAPDKITYHHNYFNNLN-----SRVPLI---RYADVHMFNNYF-KDINDTAINSRVGARVFVENNYFDNVGSGQADPT 257 (326)
T ss_dssp GGGCCEEEEEESCEEEEEE-----ECTTEE---ESCEEEEESCEE-EEESSCSEEEETTCEEEEESCEEEEESCCSBCTT
T ss_pred CcccCccEEEEeeEecCCc-----CcCCcc---cCCcEEEEccEE-ECCCceEEeecCCcEEEEEceEEECCcCcccccc
Confidence 137999999996532 221110 112678889999 455555544554 57899999999851
Q ss_pred ----eeee----ecCCCceEEEeccEEeCCCC
Q 013239 346 ----MYAI----GGSANPTINSQGNRYLAPEN 369 (447)
Q Consensus 346 ----~Yai----gg~~~~~I~segN~F~a~~~ 369 (447)
.-.+ +......+..++|.|.+...
T Consensus 258 ~~~~~~~~~~~~~s~~~g~~~~~~n~~~n~~~ 289 (326)
T 3vmv_A 258 TGFIKGPVGWFYGSPSTGYWNLRGNVFVNTPN 289 (326)
T ss_dssp TCCBCSSEECCSCSSSBCEEEEESCEEESSCC
T ss_pred ccccccceeeccCCCCceEEEEECCeEccCcC
Confidence 1111 12233456788999986543
No 47
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.61 E-value=0.026 Score=59.76 Aligned_cols=56 Identities=16% Similarity=-0.049 Sum_probs=32.3
Q ss_pred eEEEEeeEecCCCcCCCceeccC-eEEEEcceeeCce----eeeeecCCCceEEEeccEEeCCC
Q 013239 310 QVTIAYNHFGEGLIQRMPRCRHG-YFHVVNNDYTHWV----MYAIGGSANPTINSQGNRYLAPE 368 (447)
Q Consensus 310 ~VTihhN~F~~~~~qR~Pr~R~G-~~HvvNN~y~nw~----~Yaigg~~~~~I~segN~F~a~~ 368 (447)
+.+|.+|.|- ++. -.=.+|++ ...|.||++.+-. ..++-. .+....+.+|||....
T Consensus 253 ~n~i~~N~~~-~~~-ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i-~~~~~~I~nN~f~~~~ 313 (506)
T 1dbg_A 253 ENVYYGNTYL-NCQ-GTMNFRHGDHQVAINNFYIGNDQRFGYGGMFV-WGSRHVIACNYFELSE 313 (506)
T ss_dssp SCEEESCEEE-SCS-SEEEEEECSSCEEESCEEEECSSSSCBCCEEE-CSBSCEEESCEEEESS
T ss_pred CEEEECCEEE-ccc-CcEEEeecCccEEECCEEECCcCccCceEEEE-ECCCCEEECCEEECCc
Confidence 3588888884 332 23445654 3678889887532 111111 1223377899998764
No 48
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.57 E-value=0.03 Score=56.87 Aligned_cols=114 Identities=17% Similarity=0.191 Sum_probs=72.9
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEE--eecCceEEEEeeEeecCC------CC---
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAIS--IFGSSHIWIDHNSLSNCA------DG--- 270 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIs--I~gs~nVWIDHcS~S~~~------DG--- 270 (447)
|-+|.+.+++||+|.|..|..+. + ..+. ..++++|=|-+|-|.... +|
T Consensus 153 ~DaI~i~~s~nVwIDHcs~s~~~--d-------------------~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~ 211 (359)
T 1idk_A 153 GDAITLDDCDLVWIDHVTTARIG--R-------------------QHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHY 211 (359)
T ss_dssp CCSEEECSCEEEEEESCEEEEES--S-------------------CSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBS
T ss_pred CCceeecCCCcEEEEeeEeecCC--C-------------------CcEEecccCcceEEEECcEecCCcccccccCcccc
Confidence 34678889999999999998641 1 1111 346778888888887432 11
Q ss_pred -eEEeeeCCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc-CeEEEEcceeeCc
Q 013239 271 -LIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH-GYFHVVNNDYTHW 344 (447)
Q Consensus 271 -liDi~~gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~-G~~HvvNN~y~nw 344 (447)
..-+...++.||+-+|+|.++. +..+.- .....+-+.+|+| .+.....-..+. +++.+.||||.+.
T Consensus 212 ~~~~L~G~sd~vT~hhN~f~~~~-----~R~Pr~--r~g~~~hv~NN~~-~n~~~~~i~~~~~~~i~~e~N~F~~~ 279 (359)
T 1idk_A 212 WAIYLDGDADLVTMKGNYIYHTS-----GRSPKV--QDNTLLHAVNNYW-YDISGHAFEIGEGGYVLAEGNVFQNV 279 (359)
T ss_dssp CCEEECCSSCEEEEESCEEESBC-----SCTTEE--CTTCEEEEESCEE-EEEEEEEEEECTTCEEEEESCEEEEE
T ss_pred ceEEEEecCCCeEEEceEeecCc-----ccCccc--cCCceEEEECCEE-ecccceEEeccCCcEEEEEccEEECC
Confidence 1224345789999999998653 111110 0112588889999 444444333443 6899999999974
No 49
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.41 E-value=0.019 Score=57.44 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=80.6
Q ss_pred chhhhhcC----CCCeEEEEeeceEEEeCceEEe---cCCcEEEccCce-EEEec------------CceEEEeccccEE
Q 013239 155 TLRHAVIQ----DRPLWIVFKRDMVITLKQELIM---NSFKTIDGRGVN-VHIAN------------GACITIQFITNVI 214 (447)
Q Consensus 155 tLR~Av~q----~~P~~IVF~~~g~I~L~~~L~I---~SnkTI~G~gA~-~~I~~------------G~gi~i~~a~NVI 214 (447)
|+.+||.+ +..+++|+=..|+-+ +.|.| .+++||.|.|.. ..|.. +..|.+ .+++++
T Consensus 21 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 97 (319)
T 1gq8_A 21 TVSEAVAAAPEDSKTRYVIRIKAGVYR--ENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAA-VGAGFL 97 (319)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEE-CSTTCE
T ss_pred CHHHHHHhccccCCceEEEEEcCCeEe--eeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEE-ECCCEE
Confidence 78888864 222444444456653 56777 367999999853 34431 124666 589999
Q ss_pred EEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEEcceeccCCee
Q 013239 215 IHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTHHNEV 294 (447)
Q Consensus 215 IRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~H~k~ 294 (447)
++||+|++... . .....-||.+ .+.++.+.+|.|....|.+.+- .....+.+|++..+-.
T Consensus 98 ~~nlt~~Nt~g--------------~-~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~---~~r~~~~~c~I~G~vD- 157 (319)
T 1gq8_A 98 ARDITFQNTAG--------------A-AKHQAVALRV-GSDLSAFYRCDILAYQDSLYVH---SNRQFFINCFIAGTVD- 157 (319)
T ss_dssp EEEEEEEECCC--------------G-GGCCCCSEEE-CCTTEEEEEEEEECSTTCEEEC---SSEEEEESCEEEESSS-
T ss_pred EEEeEeEccCC--------------C-cCCceEEEEe-cCCcEEEEEeEECccceeeeec---CccEEEEecEEEeeee-
Confidence 99999998521 0 1124456666 5888999999999999998763 2345888888875421
Q ss_pred eEecC
Q 013239 295 MLLGH 299 (447)
Q Consensus 295 mLiG~ 299 (447)
.++|.
T Consensus 158 FIfG~ 162 (319)
T 1gq8_A 158 FIFGN 162 (319)
T ss_dssp CEEES
T ss_pred EEecC
Confidence 34564
No 50
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=96.34 E-value=0.14 Score=52.45 Aligned_cols=161 Identities=14% Similarity=0.048 Sum_probs=85.3
Q ss_pred eEEEeccccEEEEceEEEeccCCC--------CcccccCCCCcCCcc----cCCCCeEEeec--CceEEEEeeEeecCCC
Q 013239 204 CITIQFITNVIIHGINIHDCKPTG--------NAMVRSSPSHYGWRT----MADGDAISIFG--SSHIWIDHNSLSNCAD 269 (447)
Q Consensus 204 gi~i~~a~NVIIRnL~i~~~~pg~--------~~~i~~s~~~~g~r~----~~d~DaIsI~g--s~nVWIDHcS~S~~~D 269 (447)
||.+.. ++++|+|++|++....+ ...|....- ++-.. ...+|+|.+.. +....|.+|.+.+-.|
T Consensus 131 GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i-~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~d 208 (400)
T 1ru4_A 131 GAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDA-YRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSD 208 (400)
T ss_dssp SEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEE-ECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSS
T ss_pred cEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEE-EcccCccccCcccceEEEEecccCCeEEECCEEeecCC
Confidence 566765 67788888888753210 011111100 01000 13468887763 3677888998888776
Q ss_pred CeEEeeeCCceEEEEcceeccCCeeeEecCC----CCc--cC---CccceEEEEeeEecCCCcCCCceecc--CeEEEEc
Q 013239 270 GLIDAIMGSTAITVSNNYFTHHNEVMLLGHS----DSY--TR---DKVMQVTIAYNHFGEGLIQRMPRCRH--GYFHVVN 338 (447)
Q Consensus 270 GliDi~~gS~~ITISnn~f~~H~k~mLiG~s----D~~--~~---d~~~~VTihhN~F~~~~~qR~Pr~R~--G~~HvvN 338 (447)
.-+|+......|||.+|...+.... ..+.. +.. .- ....+.++.+|+.. ++...-=...+ |.+.|.|
T Consensus 209 dGidl~~~~~~v~i~nn~a~~Ng~~-~~~~n~~~gngnGf~lgg~~~~~~~~v~nn~a~-~N~~~G~~~n~~~~~~~i~n 286 (400)
T 1ru4_A 209 DGFDLFDSPQKVVIENSWAFRNGIN-YWNDSAFAGNGNGFKLGGNQAVGNHRITRSVAF-GNVSKGFDQNNNAGGVTVIN 286 (400)
T ss_dssp CSEECTTCCSCCEEESCEEESTTCC-CSCCTTCCCCCCSEECCCTTCCCCCEEESCEEE-SCSSEEEECTTCSSCCEEES
T ss_pred CcEEEEecCCCEEEEeEEEECCccc-cccccccccCCCCEEEeccCCcCCEEEEeeEEE-CCcCcCEeecCCCCCEEEEC
Confidence 6678866666789999987643221 11100 000 00 01125677777753 33222112222 4578888
Q ss_pred ceeeCce-eeeeecCC--CceEEEeccEEeCCC
Q 013239 339 NDYTHWV-MYAIGGSA--NPTINSQGNRYLAPE 368 (447)
Q Consensus 339 N~y~nw~-~Yaigg~~--~~~I~segN~F~a~~ 368 (447)
|..++-. .|.+..+. +....+++|.+....
T Consensus 287 Nt~~~N~~~~~~~~~~~~~~~~~~~nNi~~~~~ 319 (400)
T 1ru4_A 287 NTSYKNGINYGFGSNVQSGQKHYFRNNVSLSAS 319 (400)
T ss_dssp CEEESSSEEEEECSCCCTTCCEEEESCEEESSC
T ss_pred eEEECCccceEEecCCCcccceEEEccEEEccc
Confidence 8766543 34443321 114567888888754
No 51
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=96.32 E-value=0.029 Score=60.33 Aligned_cols=76 Identities=12% Similarity=0.092 Sum_probs=60.0
Q ss_pred ccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceE--EEEeeEeec----CCCCeEEeeeCCceEE
Q 013239 209 FITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHI--WIDHNSLSN----CADGLIDAIMGSTAIT 282 (447)
Q Consensus 209 ~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nV--WIDHcS~S~----~~DGliDi~~gS~~IT 282 (447)
+++||.|++|+|.+. ..-.|.+.+++|| .|++++... ..|| ||+. ++|+
T Consensus 331 ~c~NV~I~Giti~NS---------------------p~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDG-IDi~---~NV~ 385 (574)
T 1ogo_X 331 GGQTWYCVGPTINAP---------------------PFNTMDFNGNSGISSQISDYKQVGAFFFQTDG-PEIY---PNSV 385 (574)
T ss_dssp SSEEEEEESCEEECC---------------------SSCSEEECSSSCEEEEEEEEEEECCCSTTCCC-CBCC---TTCE
T ss_pred CceeEEEECeEEECC---------------------CCcEEeecCCCChhhEEEeeEeeCCCCCCCcc-Cccc---CCEE
Confidence 899999999999963 1234788899999 999998653 3888 4884 9999
Q ss_pred EEcceeccCCeeeEecCCCCccCCccceEEEEeeEe
Q 013239 283 VSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHF 318 (447)
Q Consensus 283 ISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F 318 (447)
|++|.|...+.+.-|++ -+|+|.++.+
T Consensus 386 I~nc~I~~gDDcIaIks---------~NI~I~nc~i 412 (574)
T 1ogo_X 386 VHDVFWHVNDDAIKIYY---------SGASVSRATI 412 (574)
T ss_dssp EEEEEEEESSCSEECCS---------TTCEEEEEEE
T ss_pred EEeeEEECCCCEEEECC---------ccEEEEeEEE
Confidence 99999999888887876 2566666654
No 52
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.29 E-value=0.021 Score=57.13 Aligned_cols=123 Identities=18% Similarity=0.284 Sum_probs=80.5
Q ss_pred chhhhhcC----CCCeEEEEeeceEEEeCceEEe---cCCcEEEccCce-EEEec------------CceEEEeccccEE
Q 013239 155 TLRHAVIQ----DRPLWIVFKRDMVITLKQELIM---NSFKTIDGRGVN-VHIAN------------GACITIQFITNVI 214 (447)
Q Consensus 155 tLR~Av~q----~~P~~IVF~~~g~I~L~~~L~I---~SnkTI~G~gA~-~~I~~------------G~gi~i~~a~NVI 214 (447)
|+.+||.+ +..+++|+=..|+-+ +.|.| .+++||.|.|.. ..|.. +..+.+ .+++++
T Consensus 17 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 93 (317)
T 1xg2_A 17 TLAEAVAAAPDKSKTRYVIYVKRGTYK--ENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAA-VGQGFI 93 (317)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEE-CSTTCE
T ss_pred cHHHHHhhcccCCCceEEEEEcCCEEe--eeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEE-ECCCEE
Confidence 68888864 222444444456653 56777 468999999853 34441 124666 699999
Q ss_pred EEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEEcceeccCCee
Q 013239 215 IHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTHHNEV 294 (447)
Q Consensus 215 IRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~H~k~ 294 (447)
++||+|++.. + . .....-||.+ .+.++.+.+|.|....|.+.+- +..-.+.+|++..+-.
T Consensus 94 ~~~lt~~Nt~--g------------~-~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~---~~r~~~~~c~I~G~vD- 153 (317)
T 1xg2_A 94 LQDICIQNTA--G------------P-AKDQAVALRV-GADMSVINRCRIDAYQDTLYAH---SQRQFYRDSYVTGTVD- 153 (317)
T ss_dssp EESCEEEECC--C------------G-GGCCCCSEEE-CCTTEEEESCEEECSTTCEEEC---SSEEEEESCEEEESSS-
T ss_pred EEEeEEeccc--C------------C-ccCceEEEEE-eCCcEEEEEeEeCccccceeec---CccEEEEeeEEEecee-
Confidence 9999999852 1 0 1124456666 5788999999999999998763 2345778888875421
Q ss_pred eEecCC
Q 013239 295 MLLGHS 300 (447)
Q Consensus 295 mLiG~s 300 (447)
.++|..
T Consensus 154 FIfG~~ 159 (317)
T 1xg2_A 154 FIFGNA 159 (317)
T ss_dssp CEEECC
T ss_pred EEcCCc
Confidence 245543
No 53
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=96.24 E-value=0.06 Score=57.50 Aligned_cols=99 Identities=8% Similarity=0.072 Sum_probs=67.0
Q ss_pred eccccEEEEceEEEecc------CCCC--c---ccccCCC--CcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEe
Q 013239 208 QFITNVIIHGINIHDCK------PTGN--A---MVRSSPS--HYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDA 274 (447)
Q Consensus 208 ~~a~NVIIRnL~i~~~~------pg~~--~---~i~~s~~--~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi 274 (447)
.+++||.|++|+|++.. +... + .|+...- ..+| ..|||-+. +||-|.+|.|..+.| +|.+
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~----NTDGidi~--~nV~I~n~~i~~gDD-cIaI 362 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYG----QTDGLEMY--PGTILQDVFYHTDDD-GLKM 362 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBT----TCCCCBCC--TTCEEEEEEEEESSC-CEEC
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCC----CCCccccc--CCEEEEeeEEeCCCC-EEEE
Confidence 67888888888888741 1111 1 1111100 0122 36888887 999999999999877 6688
Q ss_pred eeCCceEEEEcceec-cCCee-eEecCCCCccCCccceEEEEeeEec
Q 013239 275 IMGSTAITVSNNYFT-HHNEV-MLLGHSDSYTRDKVMQVTIAYNHFG 319 (447)
Q Consensus 275 ~~gS~~ITISnn~f~-~H~k~-mLiG~sD~~~~d~~~~VTihhN~F~ 319 (447)
+. .+|+|+||.+. .|..+ +-+|.+ .+..-+|+|.+..+.
T Consensus 363 ks--~NI~I~n~~~~~~~g~~~IsiGs~----~~~V~NV~v~n~~i~ 403 (549)
T 1x0c_A 363 YY--SNVTARNIVMWKESVAPVVEFGWT----PRNTENVLFDNVDVI 403 (549)
T ss_dssp CS--SSEEEEEEEEEECSSSCSEECCBS----CCCEEEEEEEEEEEE
T ss_pred CC--CCEEEEeeEEEcCCCCceEEECCC----CCcEEEEEEEeeEEE
Confidence 43 99999999996 35544 667873 234568899988883
No 54
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=96.20 E-value=0.075 Score=56.76 Aligned_cols=78 Identities=8% Similarity=-0.021 Sum_probs=50.3
Q ss_pred cc--EEEEceEEEecc-C-CCCcccccCCCCc---CCcccCCCCeEEeecCceEEEEeeEeecCCCCe-EEee---eCCc
Q 013239 211 TN--VIIHGINIHDCK-P-TGNAMVRSSPSHY---GWRTMADGDAISIFGSSHIWIDHNSLSNCADGL-IDAI---MGST 279 (447)
Q Consensus 211 ~N--VIIRnL~i~~~~-p-g~~~~i~~s~~~~---g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGl-iDi~---~gS~ 279 (447)
+| |.|+|+++.... + +|+=.+. .++ +-.-..+.|+|.|.. +||.|.+|.+..+..+. |.+- ....
T Consensus 318 ~ni~V~I~n~~i~~~~~~NTDGidi~---~nV~I~n~~i~~gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~ 393 (549)
T 1x0c_A 318 DLITCRVDDYKQVGAFYGQTDGLEMY---PGTILQDVFYHTDDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTE 393 (549)
T ss_dssp GGEEEEEEEEEEECCCBTTCCCCBCC---TTCEEEEEEEEESSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEE
T ss_pred CCCeEEEEeeEeEcCCCCCCCccccc---CCEEEEeeEEeCCCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEE
Confidence 48 999999986421 1 1211111 111 111235678999876 99999999998766555 6652 3457
Q ss_pred eEEEEcceeccCC
Q 013239 280 AITVSNNYFTHHN 292 (447)
Q Consensus 280 ~ITISnn~f~~H~ 292 (447)
+|||++|.|.++.
T Consensus 394 NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 394 NVLFDNVDVIHQA 406 (549)
T ss_dssp EEEEEEEEEEECC
T ss_pred EEEEEeeEEECcc
Confidence 9999999998754
No 55
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.89 E-value=0.063 Score=54.12 Aligned_cols=134 Identities=16% Similarity=0.227 Sum_probs=79.3
Q ss_pred chhhhhcCC---CCeEEEEeeceEEEeCceEEe-cCCcEEEccCce-EEEe-c-----------------CceEEEeccc
Q 013239 155 TLRHAVIQD---RPLWIVFKRDMVITLKQELIM-NSFKTIDGRGVN-VHIA-N-----------------GACITIQFIT 211 (447)
Q Consensus 155 tLR~Av~q~---~P~~IVF~~~g~I~L~~~L~I-~SnkTI~G~gA~-~~I~-~-----------------G~gi~i~~a~ 211 (447)
|+.+||.+- ..+++|+=..|+-+ +.|.| .+++||.|.|.. ..|. + ...+.+ .++
T Consensus 20 TIq~Ai~aap~~~~~~~I~I~~G~Y~--E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v-~a~ 96 (342)
T 2nsp_A 20 TIADAIASAPAGSTPFVILIKNGVYN--ERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITI-SAK 96 (342)
T ss_dssp SHHHHHHTSCSSSSCEEEEECSEEEE--CCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEE-CSB
T ss_pred hHHHHHHhcccCCCcEEEEEeCCEEE--EEEEEecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEE-ECC
Confidence 688888651 12344454456654 45777 568999999853 3443 1 123555 589
Q ss_pred cEEEEceEEEeccCCC--CcccccCCCCcCCcccCCCCeEEe--e-cCceEEEEeeEeecCCCCeEEeeeCCceEEEEcc
Q 013239 212 NVIIHGINIHDCKPTG--NAMVRSSPSHYGWRTMADGDAISI--F-GSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNN 286 (447)
Q Consensus 212 NVIIRnL~i~~~~pg~--~~~i~~s~~~~g~r~~~d~DaIsI--~-gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn 286 (447)
+++++||+|++..+-. ...-+..|. ...+..++.| . .+.++.+.+|.|....|.|.+- ....-+.+|
T Consensus 97 ~f~a~nlt~~Nt~~~~~~~~~~~~~~~-----~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~---~gr~~~~~c 168 (342)
T 2nsp_A 97 DFSAQSLTIRNDFDFPANQAKSDSDSS-----KIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVS---GGRSFFSDC 168 (342)
T ss_dssp SCEEEEEEEEECCCHHHHHHSCTTCTT-----CCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEEC---SSEEEEESC
T ss_pred CEEEEeeEEEccccccccccccccCCc-----cccCCceEEEEEeeccCcEEEEeeEEecccceEEEC---CCCEEEEcC
Confidence 9999999999864100 000000000 0012333334 3 5889999999999999988764 346777788
Q ss_pred eeccCCeeeEecCC
Q 013239 287 YFTHHNEVMLLGHS 300 (447)
Q Consensus 287 ~f~~H~k~mLiG~s 300 (447)
++...-. .++|..
T Consensus 169 ~I~G~vD-FIFG~a 181 (342)
T 2nsp_A 169 RISGTVD-FIFGDG 181 (342)
T ss_dssp EEEESEE-EEEESS
T ss_pred EEEeceE-EEeCCc
Confidence 7764311 355543
No 56
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=95.84 E-value=0.077 Score=54.64 Aligned_cols=151 Identities=18% Similarity=0.112 Sum_probs=85.5
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEeeeC--
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDAIMG-- 277 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi~~g-- 277 (447)
+-+|.|.+++||+|.|..|..+...+ .+.|..+|.. ..-.|+ |.+. ++++|=|-.|-|....-++|--..+
T Consensus 183 ~DaI~i~~s~nVWIDHcs~s~~~~~d----~~~~~~~G~~-~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~ 257 (399)
T 2o04_A 183 YDNITINGGTHIWIDHCTFNDGSRPD----STSPKYYGRK-YQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSK 257 (399)
T ss_dssp CCSEEEESCEEEEEESCEEECTTCCG----GGSCEETTEE-CCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTC
T ss_pred CCeEEecCCCcEEEEeeeeecCCCcc----ccccccccce-eeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCC
Confidence 44688899999999999999764211 0112223311 112343 4565 6888888888888754444332111
Q ss_pred -----CceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcC-------CCceec-cCeEEEEcceeeCc
Q 013239 278 -----STAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQ-------RMPRCR-HGYFHVVNNDYTHW 344 (447)
Q Consensus 278 -----S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~q-------R~Pr~R-~G~~HvvNN~y~nw 344 (447)
...||+-+|+|.++. +..+.. +.-++-+.+|+| .+... ..=-.+ .+++-+.||||.+-
T Consensus 258 ~~d~g~~~vT~h~N~f~~~~-----~R~Pr~---R~G~~Hv~NN~~-~n~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~ 328 (399)
T 2o04_A 258 TSDDGKLKITLHHNRYKNIV-----QAAPRV---RFGQVHVYNNYY-EGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVP 328 (399)
T ss_dssp GGGTTCCCEEEESCEEEEEE-----ECTTEE---SSCEEEEESCEE-ECCTTCSSSCCCCSEEECTTCEEEEESCEEECT
T ss_pred ccccCceeEEEECcEecCCc-----ccCCCc---ccceEEEEcceE-ECCCCCCccceeeEeccCCCcEEEEEceEEECC
Confidence 128999999997542 111110 112578899999 33322 111112 25789999999874
Q ss_pred eee---eeecC-CCceEEEeccEEeC
Q 013239 345 VMY---AIGGS-ANPTINSQGNRYLA 366 (447)
Q Consensus 345 ~~Y---aigg~-~~~~I~segN~F~a 366 (447)
... .+... .+..+...+|+|..
T Consensus 329 ~~~~~~~~~~~s~~~~~~~~gn~~~g 354 (399)
T 2o04_A 329 GLSAAKTISVFSGGTALYDSGTLLNG 354 (399)
T ss_dssp TCCSGGGEEECTTCCBCEEESCEETT
T ss_pred CCCccceeeeccCCceEEEeCceecC
Confidence 211 01111 23345677888853
No 57
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=95.78 E-value=0.082 Score=53.58 Aligned_cols=129 Identities=19% Similarity=0.181 Sum_probs=76.8
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEeeeC--
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDAIMG-- 277 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi~~g-- 277 (447)
|-+|.|.+++||+|.|..|..+...+. +.|..+|. ...-.|+ |.+. ++++|=|.+|.|....-++|--..+
T Consensus 133 ~DaI~i~~s~nVWIDH~s~s~~~~~d~----~~~~~~G~-~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~ 207 (355)
T 1pcl_A 133 WDAAVIDNSTNVWVDHVTISDGSFTDD----KYTTKDGE-KYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSN 207 (355)
T ss_pred CceEEecCCCcEEEEeeEEeccccCcc----ccccccCc-cccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCC
Confidence 457888899999999999997642221 11112221 1112354 4455 7899999999999865554332111
Q ss_pred ------CceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCC--c-----eec-cCeEEEEcceeeC
Q 013239 278 ------STAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRM--P-----RCR-HGYFHVVNNDYTH 343 (447)
Q Consensus 278 ------S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~--P-----r~R-~G~~HvvNN~y~n 343 (447)
.-.||+-+|+|.++.. ..+. -+.-.+-+.+|+| .+..... | -.+ .+++-+.||||.+
T Consensus 208 ~~~d~g~~~vT~hhN~f~~~~~-----R~Pr---vR~G~~Hv~NN~~-~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~ 278 (355)
T 1pcl_A 208 GSQDSGKLRVTFHNNVFDRVTE-----RAPR---VRFGSIHAYNNVY-LGDVKHSVYPYLYSFGLGTSGSILSESNSFTL 278 (355)
T ss_pred cccccCcceEEEECcEEeCCcc-----cCCc---eecceEEEEcceE-EcccCCCccccceEecCCCCcEEEEEccEEEC
Confidence 2269999999976531 1111 0112477889999 3322110 0 112 2578899999997
Q ss_pred c
Q 013239 344 W 344 (447)
Q Consensus 344 w 344 (447)
-
T Consensus 279 ~ 279 (355)
T 1pcl_A 279 S 279 (355)
T ss_pred C
Confidence 4
No 58
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.65 E-value=0.094 Score=53.40 Aligned_cols=136 Identities=16% Similarity=0.232 Sum_probs=80.9
Q ss_pred chhhhhcC----CCCeEEEEeeceEEEeCceEEe-cCCcEEEccCce-EEEecC------------------ceEEEecc
Q 013239 155 TLRHAVIQ----DRPLWIVFKRDMVITLKQELIM-NSFKTIDGRGVN-VHIANG------------------ACITIQFI 210 (447)
Q Consensus 155 tLR~Av~q----~~P~~IVF~~~g~I~L~~~L~I-~SnkTI~G~gA~-~~I~~G------------------~gi~i~~a 210 (447)
|+.+||.+ +.|.+|.+ ..|+- ++.|.| .+++||.|.|.. ..|... ..+.+ .+
T Consensus 46 TIq~Ai~aa~~~~~~~~I~I-~~G~Y--~E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V-~a 121 (364)
T 3uw0_A 46 SINAALKSAPKDDTPFIIFL-KNGVY--TERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLV-NA 121 (364)
T ss_dssp CHHHHHHHSCSSSSCEEEEE-CSEEE--CCCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEE-CS
T ss_pred cHHHHHhhcccCCCcEEEEE-eCCEE--EEEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEE-EC
Confidence 68888754 23334444 34554 345677 467999999863 344311 23445 68
Q ss_pred ccEEEEceEEEeccCCC-Cccc-ccCCCCcCCcccCCCCeEEee-cCceEEEEeeEeecCCCCeEEeeeCCceEEEEcce
Q 013239 211 TNVIIHGINIHDCKPTG-NAMV-RSSPSHYGWRTMADGDAISIF-GSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNY 287 (447)
Q Consensus 211 ~NVIIRnL~i~~~~pg~-~~~i-~~s~~~~g~r~~~d~DaIsI~-gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~ 287 (447)
+|++++||.|++..+.. ++.. .+.|... .....=||.+. .+.++.+.+|.|....|.|.+- .+...-+.+|+
T Consensus 122 ~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~---~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~--~~gr~yf~~c~ 196 (364)
T 3uw0_A 122 PNFTAENLTIRNDFDFPANKKKADTDPTKL---KDTQAVALLLAENSDKARFKAVKLEGYQDTLYSK--TGSRSYFSDCE 196 (364)
T ss_dssp TTCEEEEEEEEECCCHHHHHHSCTTCTTCC---SCCCCCSEEECTTCEEEEEEEEEEECSBSCEEEC--TTCEEEEESCE
T ss_pred CCEEEEeeeeEcCCcccccccccccccccc---cCCccEEEEEecCCCeEEEEeeEEEecccceEeC--CCCCEEEEcCE
Confidence 99999999999864200 0000 0001000 01234566665 5899999999999999998763 35577778888
Q ss_pred eccCCeeeEecCC
Q 013239 288 FTHHNEVMLLGHS 300 (447)
Q Consensus 288 f~~H~k~mLiG~s 300 (447)
+...-. .++|..
T Consensus 197 I~GtvD-FIFG~a 208 (364)
T 3uw0_A 197 ISGHVD-FIFGSG 208 (364)
T ss_dssp EEESEE-EEEESS
T ss_pred EEcCCC-EECCcc
Confidence 774311 245543
No 59
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=95.60 E-value=0.13 Score=53.32 Aligned_cols=151 Identities=18% Similarity=0.112 Sum_probs=85.9
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEeeeCC-
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDAIMGS- 278 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi~~gS- 278 (447)
+-+|.|.+++||+|.|..|..+...+ .+.|..+|. ...-.|+ |.+. ++++|=|-.|.|....-++|--..++
T Consensus 189 ~DaI~i~~s~nVWIDHcs~s~~~~~d----~~~~~~~Gr-~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~ 263 (416)
T 1vbl_A 189 YDSISIEGSSHIWIDHNTFTDGDHPD----RSLGTYFGR-PFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSR 263 (416)
T ss_dssp CCSEEEESCEEEEEESCEEECTTCCG----GGSCEETTE-ECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTC
T ss_pred CceEEecCCceEEEEccEEecCCCcc----cccccccCc-ceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCC
Confidence 45688899999999999999764211 011222331 1112344 4555 68888888888887544443321111
Q ss_pred ------ceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCC----C--ceec-cCeEEEEcceeeCce
Q 013239 279 ------TAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQR----M--PRCR-HGYFHVVNNDYTHWV 345 (447)
Q Consensus 279 ------~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR----~--Pr~R-~G~~HvvNN~y~nw~ 345 (447)
-.||+-+|+|.++. ...+.. +.-++-+.+|+| .+.... + =..+ .+++-+-||||..-.
T Consensus 264 ~~d~g~~~VT~hhN~f~~~~-----~R~Pr~---R~G~~Hv~NN~~-~n~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~ 334 (416)
T 1vbl_A 264 MADSGHLRVTLHHNYYKNVT-----QRLPRV---RFGQVHIYNNYY-EFSNLADYDFQYAWGVGVFSQIYAQNNYFSFDW 334 (416)
T ss_dssp GGGTTCCCEEEESCEEEEEE-----ECSSEE---SSCEEEEESCEE-EECTTSSSCCCCSEEEETTCEEEEESCEEEESS
T ss_pred cccCCceEEEEECcEecCCc-----cCCccc---ccceEEEEcceE-ECCCCCcccceeEeccCCCcEEEEECCEEECCC
Confidence 26999999997543 111110 112578899999 332221 0 0112 257889999998631
Q ss_pred --eee--eec--CCCceEEEeccEEeC
Q 013239 346 --MYA--IGG--SANPTINSQGNRYLA 366 (447)
Q Consensus 346 --~Ya--igg--~~~~~I~segN~F~a 366 (447)
.+. +.- ..+..+...||+|..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~gn~~~~ 361 (416)
T 1vbl_A 335 DIDPSLIIKVWSKNEESMYETGTIVDL 361 (416)
T ss_dssp CCCGGGSEEEECSSCCEEEEESCEEEE
T ss_pred CCCccceeeeeccCCceEEecCCEEee
Confidence 010 111 133456778999953
No 60
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=95.46 E-value=0.14 Score=51.30 Aligned_cols=144 Identities=15% Similarity=0.134 Sum_probs=84.3
Q ss_pred CceEEEe-----ccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEe
Q 013239 202 GACITIQ-----FITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDA 274 (447)
Q Consensus 202 G~gi~i~-----~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi 274 (447)
|-+|.+. .++||+|.|..|......-.+ .+ ....|+ |.+. ++++|=|-+|-|....-++|--
T Consensus 113 ~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~--------~~---~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G 181 (330)
T 2qy1_A 113 ADSISLEGNSSGEPSKIWVDHNTVFASLTKCSG--------AG---DASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNG 181 (330)
T ss_dssp CCSEEEECBTTBCCEEEEEESCEEECCCCCCTT--------CT---TCSSCCSEEEESSCEEEEEESCEEEEEEECCEES
T ss_pred CcceeeccccCcccccEEEEeEEEEcccccccc--------CC---cceeecccccccCcceEEEEcceeccCCeEEEEC
Confidence 4567887 599999999999743210000 00 122344 4554 5888888888887654444322
Q ss_pred ee------CCceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc-CeEEEEcceeeCcee-
Q 013239 275 IM------GSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH-GYFHVVNNDYTHWVM- 346 (447)
Q Consensus 275 ~~------gS~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~-G~~HvvNN~y~nw~~- 346 (447)
.. +...||+-+|+|.++. +..+.- +.-++-+.+|+| .+.....--.+. +++-+.||||.+-..
T Consensus 182 ~sd~~~~~~~~~vT~h~N~f~~~~-----~R~Pr~---r~G~~hv~NN~~-~n~~~~~i~~~~~~~i~~e~N~F~~~~~p 252 (330)
T 2qy1_A 182 YSDSDTKNSAARTTYHHNRFENVE-----SRVPLQ---RFGLSHIYNNYF-NNVTTSGINVRMGGIAKIESNYFENIKNP 252 (330)
T ss_dssp SSTTCGGGGGCEEEEESCEEEEEE-----ECTTEE---ESSEEEEESCEE-EEECSCSEEEETTCEEEEESCEEEEEESS
T ss_pred CCCccccCCCceEEEECcEEcCCC-----CCCCce---ecceEEEEeeEE-EcccceEeccCCCcEEEEEccEEECCCCc
Confidence 11 1159999999996532 111110 112577889999 455444444443 689999999987421
Q ss_pred -eeeecCCCceEEEeccEEeC
Q 013239 347 -YAIGGSANPTINSQGNRYLA 366 (447)
Q Consensus 347 -Yaigg~~~~~I~segN~F~a 366 (447)
.............++| |..
T Consensus 253 ~~~~~~~~~g~~~~~~n-~~~ 272 (330)
T 2qy1_A 253 VTSRDSSEIGYWDLINN-YVG 272 (330)
T ss_dssp EEECSSSSBCEEEEESC-EEC
T ss_pred eeeccCCCceeEEEeCC-ccc
Confidence 1111122245677888 665
No 61
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=95.28 E-value=0.082 Score=53.57 Aligned_cols=146 Identities=18% Similarity=0.176 Sum_probs=85.4
Q ss_pred CceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEeeeCC-
Q 013239 202 GACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDAIMGS- 278 (447)
Q Consensus 202 G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi~~gS- 278 (447)
|-+|.+.+++||+|.|..|......-.+ .++ .....|+ +.+. ++.+|=|.+|-|....-..+.-...+
T Consensus 130 ~DaI~i~~s~nVWIDH~s~s~~~~~~~g----~~~-----~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~ 200 (353)
T 1air_A 130 GDMIRVDDSPNVWVDHNELFAANHECDG----TPD-----NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSD 200 (353)
T ss_dssp CCSEEEESCCSEEEESCEEECCSCCCTT----CGG-----GCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTC
T ss_pred CCeEEeeCCCcEEEEeeEEecCCccccc----ccc-----cccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCC
Confidence 4468888999999999999853210000 000 0012344 4553 78899999999986544433211111
Q ss_pred --ceEEEEcceeccCCe-eeEecCCCCccCCccceEEEEeeEecCCCcCCCceecc-CeEEEEcceeeCcee--ee-eec
Q 013239 279 --TAITVSNNYFTHHNE-VMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH-GYFHVVNNDYTHWVM--YA-IGG 351 (447)
Q Consensus 279 --~~ITISnn~f~~H~k-~mLiG~sD~~~~d~~~~VTihhN~F~~~~~qR~Pr~R~-G~~HvvNN~y~nw~~--Ya-igg 351 (447)
..||+-+|+|.++.. .=++.. -++-+.+|+| .+...+.-..+. +++-+.||||.+-.. .. ..+
T Consensus 201 ~g~~vT~hhN~f~~~~~R~Pr~r~---------G~~Hv~NN~~-~n~~~~~~~~~~~~~i~~e~N~F~~~~~p~~~~~~~ 270 (353)
T 1air_A 201 TGRNITYHHNYYNDVNARLPLQRG---------GLVHAYNNLY-TNITGSGLNVRQNGQALIENNWFEKAINPVTSRYDG 270 (353)
T ss_dssp CCCEEEEESCEEEEEEECSCEEES---------SEEEEESCEE-EEESSCSEEEETTCEEEEESCEEEEEESSEEECSSS
T ss_pred CCceEEEEceEEcCCcCCCCCCcC---------ceEEEEccEE-ECCCCceeccCCCcEEEEEceEEECCCCceEecCCC
Confidence 479999999976431 112221 2677889999 455444433443 689999999987421 11 122
Q ss_pred CCCceEEEeccEEeC
Q 013239 352 SANPTINSQGNRYLA 366 (447)
Q Consensus 352 ~~~~~I~segN~F~a 366 (447)
.........+|.|..
T Consensus 271 ~~~g~~~~~~n~~~~ 285 (353)
T 1air_A 271 KNFGTWVLKGNNITK 285 (353)
T ss_dssp SSCCEEEEESCSCCS
T ss_pred CCCceeEeccccccc
Confidence 223456667777753
No 62
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=95.28 E-value=0.073 Score=55.09 Aligned_cols=64 Identities=16% Similarity=0.335 Sum_probs=44.5
Q ss_pred CCCeEEeec-CceEEEEeeEeecCCCCe-EEeeeCCceEEEEccee-ccCCe-eeEecCCCCccCCccceEEEEeeEe
Q 013239 245 DGDAISIFG-SSHIWIDHNSLSNCADGL-IDAIMGSTAITVSNNYF-THHNE-VMLLGHSDSYTRDKVMQVTIAYNHF 318 (447)
Q Consensus 245 d~DaIsI~g-s~nVWIDHcS~S~~~DGl-iDi~~gS~~ITISnn~f-~~H~k-~mLiG~sD~~~~d~~~~VTihhN~F 318 (447)
-+.+|.+.| +....|-.+.+....||. |-+ ..+...+|+.|.+ .+... +.+.... +.+|..|.|
T Consensus 205 ~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl-~ns~~~~I~~N~i~~~~R~gIh~m~s~---------~~~i~~N~f 272 (410)
T 2inu_A 205 CGNCVELTGAGQATIVSGNHMGAGPDGVTLLA-ENHEGLLVTGNNLFPRGRSLIEFTGCN---------RCSVTSNRL 272 (410)
T ss_dssp SSEEEEECSCEESCEEESCEEECCTTSEEEEE-ESEESCEEESCEECSCSSEEEEEESCB---------SCEEESCEE
T ss_pred cCCceeeccccccceEecceeeecCCCCEEEE-EeCCCCEEECCCcccCcceEEEEEccC---------CCEEECCEE
Confidence 567788888 778888888999999983 233 5688888998855 54433 3444543 446777777
No 63
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=94.84 E-value=0.13 Score=53.97 Aligned_cols=125 Identities=15% Similarity=0.103 Sum_probs=76.2
Q ss_pred CCCeEEEEeeceEEEeCceEEecCCcEEEccCceEEE--ecCceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCC
Q 013239 163 DRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHI--ANGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGW 240 (447)
Q Consensus 163 ~~P~~IVF~~~g~I~L~~~L~I~SnkTI~G~gA~~~I--~~G~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~ 240 (447)
..|+.|.|...-.+.++. |.+....+|..- ..+++ .+| +.+ .++||.|+|++|...
T Consensus 130 ~rp~~i~~~~~~Nv~I~g-Iti~n~w~ih~s-~~V~i~NtDG--i~i-~s~nV~I~n~~I~~g----------------- 187 (464)
T 1h80_A 130 KNLAVFKLGDVRNYKISN-FTIDDNKTIFAS-ILVDVTERNG--RLH-WSRNGIIERIKQNNA----------------- 187 (464)
T ss_dssp CBEEEEEECSEEEEEEEE-EEEECCSCBSCS-EEECEEEETT--EEE-EEEEEEEEEEEEESC-----------------
T ss_pred CCceEEEEEeeccEEEee-eEEeccceEeec-eeeeeecCCC--cee-eccCEEEeceEEecC-----------------
Confidence 457777776544444432 222112232210 00111 245 444 789999999999852
Q ss_pred cccCCCCe-EEeecCceEEEEeeEeecCCCCeEEeeeC-----------CceEEEEcceeccCCeeeEecCCCCccCCcc
Q 013239 241 RTMADGDA-ISIFGSSHIWIDHNSLSNCADGLIDAIMG-----------STAITVSNNYFTHHNEVMLLGHSDSYTRDKV 308 (447)
Q Consensus 241 r~~~d~Da-IsI~gs~nVWIDHcS~S~~~DGliDi~~g-----------S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~ 308 (447)
.+++| +...+++||.|++|.|.. .+ .|.++.+ ..+||++||.|.+-...+.|+.+. -..
T Consensus 188 ---ddgiGs~~~~~~~NV~V~n~~~~g-g~-GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~----~~i 258 (464)
T 1h80_A 188 ---LFGYGLIQTYGADNILFRNLHSEG-GI-ALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPHF----MKN 258 (464)
T ss_dssp ---CTTCEEEEESEEEEEEEEEEEEES-SE-EEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECTT----CBC
T ss_pred ---CCeEEecccCCEeEEEEEeeEEEC-CC-EEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCCC----ceE
Confidence 23456 556789999999999887 33 3344333 579999999999988888888332 123
Q ss_pred ceEEEEeeEe
Q 013239 309 MQVTIAYNHF 318 (447)
Q Consensus 309 ~~VTihhN~F 318 (447)
-+|||-+-..
T Consensus 259 snItfeNI~~ 268 (464)
T 1h80_A 259 GDVQVTNVSS 268 (464)
T ss_dssp CCEEEEEEEE
T ss_pred eEEEEEEEEE
Confidence 4677655444
No 64
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=93.83 E-value=0.23 Score=50.53 Aligned_cols=129 Identities=18% Similarity=0.163 Sum_probs=74.8
Q ss_pred CceEEEec-cccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCe-EEee-cCceEEEEeeEeecCCCCeEEeeeC-
Q 013239 202 GACITIQF-ITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDA-ISIF-GSSHIWIDHNSLSNCADGLIDAIMG- 277 (447)
Q Consensus 202 G~gi~i~~-a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~Da-IsI~-gs~nVWIDHcS~S~~~DGliDi~~g- 277 (447)
|-+|.|.+ ++||+|.|..|..+...+. +.|..+| |...-.|+ |.+. ++++|=|-.|.|....-++|--..+
T Consensus 143 ~DaI~i~~~s~nVWIDHcs~s~~~~~~~----~~~~~~G-~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~ 217 (361)
T 1pe9_A 143 WDAMNITNGAHHVWIDHVTISDGNFTDD----MYTTKDG-ETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDS 217 (361)
T ss_dssp CCSEEEETTCEEEEEESCEEECTTSCGG----GCCEETT-EECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTT
T ss_pred CceEEeecCCceEEEEccEeeccccccc----ccccccC-cceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCC
Confidence 55788988 9999999999997642110 1111122 11122344 5565 6888888888887654444332111
Q ss_pred -------CceEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEecCCCcC-------CCceec-cCeEEEEcceee
Q 013239 278 -------STAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQ-------RMPRCR-HGYFHVVNNDYT 342 (447)
Q Consensus 278 -------S~~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F~~~~~q-------R~Pr~R-~G~~HvvNN~y~ 342 (447)
--.||+-+|+|.++. +..+.. +.-++-+.+|+| .+... -.-.++ .+++-+-||||.
T Consensus 218 ~~~~d~g~~~vT~hhN~f~~~~-----~R~Pr~---R~G~~Hv~NN~~-~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~ 288 (361)
T 1pe9_A 218 NGSQDKGKLHVTLFNNVFNRVT-----ERAPRV---RYGSIHSFNNVF-KGDAKDPVYRYQYSFGIGTSGSVLSEGNSFT 288 (361)
T ss_dssp CHHHHTTCCEEEEESCEEEEEE-----ECSSEE---SSCEEEEESCEE-EEETTCSSSCCCCSEEECTTCEEEEESCEEE
T ss_pred CcccccCcceEEEECeEEcCcc-----ccCccc---ccceEEEEcceE-ecccCCCccccceEecCCCCcEEEEECCEEE
Confidence 126999999996532 211110 112578889999 22111 001112 257899999998
Q ss_pred Cc
Q 013239 343 HW 344 (447)
Q Consensus 343 nw 344 (447)
+-
T Consensus 289 ~~ 290 (361)
T 1pe9_A 289 IA 290 (361)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 65
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=92.09 E-value=0.57 Score=50.62 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=46.6
Q ss_pred eEEE---eccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEe-eeCCc
Q 013239 204 CITI---QFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDA-IMGST 279 (447)
Q Consensus 204 gi~i---~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi-~~gS~ 279 (447)
.+.+ ..++||+|+||+|... |.++ ...||| |+|.+|.+..+ |..|.+ +.++.
T Consensus 200 ~I~iG~~~~c~NVtI~nvtfi~a-------I~ss---------pNTDGI-------V~I~nc~I~tG-DDCIAI~KSGs~ 255 (600)
T 2x6w_A 200 AITLGWNGYGSNCYVRKCRFINL-------VNSS---------VNADHS-------TVYVNCPYSGV-ESCYFSMSSSFA 255 (600)
T ss_dssp SEEECBTTBEEEEEEESCEEECC-------CCCS---------SCCCEE-------EEEECSSSEEE-ESCEEECCCTTH
T ss_pred EEEeCCCCCcccEEEeCeEEcce-------EecC---------CCCCEE-------EEEEeeEEecC-CcEEEEecCCCc
Confidence 4555 5677888888883221 0010 245777 88888888764 666688 76664
Q ss_pred -eEEEEcceeccCCeeeEecCCCCccCCccceEEEEeeEe
Q 013239 280 -AITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHF 318 (447)
Q Consensus 280 -~ITISnn~f~~H~k~mLiG~sD~~~~d~~~~VTihhN~F 318 (447)
+++++.| ...| -++-||+. .....-+|++.+ .+
T Consensus 256 ~ni~~e~~-~~GH-gGISIGSe---~~ggV~NV~V~N-rI 289 (600)
T 2x6w_A 256 RNIACSVQ-LHQH-DTFYRGST---VNGYCRGAYVVM-HA 289 (600)
T ss_dssp HHHEEEEE-ECSS-SEEEESCE---EEEESEEEEEEE-CG
T ss_pred CCeEEEEE-cCCC-CcEEeccc---ccCcEEEEEEEE-EE
Confidence 3565521 1223 24455642 112234566655 44
No 66
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=83.33 E-value=20 Score=37.85 Aligned_cols=206 Identities=13% Similarity=0.098 Sum_probs=98.9
Q ss_pred hhhhhc----CCCCeEEEEeece---EEEeCceEEecCCcEEEccCceEEEe-----cCceEEEec---cccEEEEceEE
Q 013239 156 LRHAVI----QDRPLWIVFKRDM---VITLKQELIMNSFKTIDGRGVNVHIA-----NGACITIQF---ITNVIIHGINI 220 (447)
Q Consensus 156 LR~Av~----q~~P~~IVF~~~g---~I~L~~~L~I~SnkTI~G~gA~~~I~-----~G~gi~i~~---a~NVIIRnL~i 220 (447)
|..|+. ++++.+|+|-.+- +..+...|.+.++++|.|.+....+. .|.-+.... -.-.-++||.|
T Consensus 71 IQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge~~AtIl~s~~~I~GtIia~~y~s~I~~~~VeNIaI 150 (514)
T 2vbk_A 71 IQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLIPGGVNIRGVGKASQLRAKSGLTGSVLRLSYDSDTIGRYLRNIRV 150 (514)
T ss_dssp HHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEECTTEEEECCSTTSEEEECTTCCSEEEEECCCSCCSCEEEESCEE
T ss_pred HHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEecCCeEEEEecCceEeeccccccccEEeccCCccccccCceEEEE
Confidence 665554 2367778776531 67777888889999999985443221 131111110 11223577777
Q ss_pred EeccCCCCcccccCCCCcCC-------ccc--CCCCeEEeecCc------eEEEEe---eEeecCCCCeEEeeeCCceEE
Q 013239 221 HDCKPTGNAMVRSSPSHYGW-------RTM--ADGDAISIFGSS------HIWIDH---NSLSNCADGLIDAIMGSTAIT 282 (447)
Q Consensus 221 ~~~~pg~~~~i~~s~~~~g~-------r~~--~d~DaIsI~gs~------nVWIDH---cS~S~~~DGliDi~~gS~~IT 282 (447)
.+. |.|... ...| |.. .--|.|.+.+.+ ..|-=| |+.-.+. -.|++.....+|.
T Consensus 151 TG~-----GTIDG~--g~n~t~e~~~~Rq~~~~~fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r-~gL~f~eSCrNV~ 222 (514)
T 2vbk_A 151 TGN-----NTCNGI--DTNITAEDSVIRQVYGWVFDNVMVNEVETAYLMQGLWHSKFIACQAGTCR-VGLHFLGQCVSVS 222 (514)
T ss_dssp ECC-----SSSEEE--EESCCTTCSSCCCEESEEEESCEEEEEEEEEEEESEEEEEEESCEEEEEE-EEEEEESCCEEEE
T ss_pred ECC-----CeEeCC--CCCccccceeeeccceEEeeeEEEEeEEEeEeccCcEEEeEeccCceecc-cCccccCCCCeEE
Confidence 642 121100 0011 000 001223332221 123222 3333333 2457766789999
Q ss_pred EEcceeccCC-------------------------eeeEecCCCCccCCccce-EEEEeeEecCCCcCCCceeccCeEEE
Q 013239 283 VSNNYFTHHN-------------------------EVMLLGHSDSYTRDKVMQ-VTIAYNHFGEGLIQRMPRCRHGYFHV 336 (447)
Q Consensus 283 ISnn~f~~H~-------------------------k~mLiG~sD~~~~d~~~~-VTihhN~F~~~~~qR~Pr~R~G~~Hv 336 (447)
|++|+|.-.+ -...||+.. ...+..+ |+++.++| .++.|---..-...--+
T Consensus 223 IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~hgav~igSE~--m~~Gvk~~v~v~~Clf-~~td~~~~~~~~~~~~~ 299 (514)
T 2vbk_A 223 VSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVRSEAIILDSET--MCIGFKNAVYVHDCLD-LHMEQLDLDYCGSTGVV 299 (514)
T ss_dssp EESCEEECTTSCCTTCEEEEEECBCCTTTSSCBCCEEEEEESSE--EEESCSEEEEESCCEE-EEEESEEEEEESSEEEE
T ss_pred EeccEEecCcceeeeecCceecccccCCcchhcccccEEECchh--hcccccccEEEEeeec-cCCccccccccCCcceE
Confidence 9999998211 122344320 0113345 99999999 46776532222223444
Q ss_pred EcceeeCce--eeeeecCCCceEEEeccEEeCCCCccc
Q 013239 337 VNNDYTHWV--MYAIGGSANPTINSQGNRYLAPENTFA 372 (447)
Q Consensus 337 vNN~y~nw~--~Yaigg~~~~~I~segN~F~a~~~~~~ 372 (447)
+-|+--.+. ..=|...+..+--+.|=||..|..+..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (514)
T 2vbk_A 300 IENVNGGFSFSNSWIAADADGTEQFTGIYFRTPTSTQS 337 (514)
T ss_dssp ESCCEEEEEEEEEEEEECTTCCSCCEEEEECCCSSCCC
T ss_pred EEeccCceeeccceEEecCCCcceeEEEEEeCCCcccc
Confidence 555532221 111223333344445667877765533
No 67
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=82.06 E-value=8.2 Score=40.07 Aligned_cols=122 Identities=13% Similarity=0.093 Sum_probs=72.4
Q ss_pred chhhhhcC-----CCCeEEEEeeceEEEeCceEEe---cCCcEEEccCce---EEEec------------------C---
Q 013239 155 TLRHAVIQ-----DRPLWIVFKRDMVITLKQELIM---NSFKTIDGRGVN---VHIAN------------------G--- 202 (447)
Q Consensus 155 tLR~Av~q-----~~P~~IVF~~~g~I~L~~~L~I---~SnkTI~G~gA~---~~I~~------------------G--- 202 (447)
|+.+||.+ ...+++||=+.|+-+ +.|.| .+++||.|.|.. ++|.. |
T Consensus 91 TIqeAVdaap~~~~~~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~~~~~~d~~~~~n~~G~~~ 168 (422)
T 3grh_A 91 TIQAAVDAAIIKRTNKRQYIAVMPGEYQ--GTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYM 168 (422)
T ss_dssp SHHHHHHHHHTTCCSSCEEEEECSEEEE--SCEEECCCSSCEEEEECSSSGGGEEEEECCCTTSCHHHHHHHHCGGGSSC
T ss_pred CHHHHHHhchhcCCCccEEEEEeCCeEe--eeEEecCCCCcEEEEeccCCCceEEEeecccccccccccccccccccccc
Confidence 67777753 233566665667665 45667 489999998874 33320 0
Q ss_pred -----------------ceE------E-EeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEE
Q 013239 203 -----------------ACI------T-IQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIW 258 (447)
Q Consensus 203 -----------------~gi------~-i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVW 258 (447)
..+ + ...+++++.+||.|++..+-.. + ......-|+.+ .+.++.
T Consensus 169 ~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~----------~-~~~~QAVAL~v-~gDr~~ 236 (422)
T 3grh_A 169 PGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSV----------D-AGNHPAVALRT-DGDQVQ 236 (422)
T ss_dssp TTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGS----------C-SSCCCCCSEEE-CCSSEE
T ss_pred cCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCC----------C-CCCCceEEEEe-cCCcEE
Confidence 011 1 1257999999999998542100 0 00123445555 568899
Q ss_pred EEeeEeecCCCCeEEee---------eCCceEEEEcceecc
Q 013239 259 IDHNSLSNCADGLIDAI---------MGSTAITVSNNYFTH 290 (447)
Q Consensus 259 IDHcS~S~~~DGliDi~---------~gS~~ITISnn~f~~ 290 (447)
+.+|.|.-..|=|+--. .....--+.+|++..
T Consensus 237 fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeG 277 (422)
T 3grh_A 237 INNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEG 277 (422)
T ss_dssp EEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEE
T ss_pred EEeeEEEeecceeeeccccccccccccccccEEEEecEEec
Confidence 99999998888775311 013345556666653
No 68
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=80.27 E-value=27 Score=38.72 Aligned_cols=46 Identities=20% Similarity=0.205 Sum_probs=24.7
Q ss_pred CCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEEcceeccCCee
Q 013239 246 GDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVSNNYFTHHNEV 294 (447)
Q Consensus 246 ~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISnn~f~~H~k~ 294 (447)
-+||.++.++.+.|..+.|..+.-|. ..+..-.|+.|-.|.+-..+
T Consensus 201 ~~GI~~e~GSgg~i~Dl~f~GG~~G~---~~gnQQfT~rnltF~~~~ta 246 (758)
T 3eqn_A 201 HQGIFMENGSGGFLGDLVFNGGNIGA---TFGNQQFTVRNLTFNNANTA 246 (758)
T ss_dssp EEEEEECSCCCCEEEEEEEESCSEEE---EEECSCCEEEEEEEESCSEE
T ss_pred ceeEEecCCCceEEEeeEEeCCceEE---EcCCcceEEeccEEeChHHH
Confidence 45666666666666666666654333 22344445555555544333
No 69
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=67.04 E-value=34 Score=31.98 Aligned_cols=29 Identities=17% Similarity=0.203 Sum_probs=12.5
Q ss_pred CCeEEeecCceEEEEeeEeecCCCCeEEe
Q 013239 246 GDAISIFGSSHIWIDHNSLSNCADGLIDA 274 (447)
Q Consensus 246 ~DaIsI~gs~nVWIDHcS~S~~~DGliDi 274 (447)
.||+++.++..+.|.-.++..+.|-.|-.
T Consensus 87 EDA~T~kg~g~~~I~GGgA~~A~DKV~Q~ 115 (196)
T 3t9g_A 87 EDALTVKSEGVVEVIGGSAKEAADKVFQL 115 (196)
T ss_dssp SCSEEECSSEEEEEESCEEEEEEEEEEEE
T ss_pred ceeeEEcCCCeEEEECCCccCCCceEEEE
Confidence 34444444444444444444444444433
No 70
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=65.69 E-value=18 Score=33.82 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=19.4
Q ss_pred CCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEEc
Q 013239 245 DGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVSN 285 (447)
Q Consensus 245 d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITISn 285 (447)
..||+++.++..++|.-.....+.|-.|-. .+...++|++
T Consensus 82 cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~-Ng~Gtv~I~n 121 (197)
T 1ee6_A 82 GEDALTLKSSGTVNISGGAAYKAYDKVFQI-NAAGTINIRN 121 (197)
T ss_dssp CSCSEEEEESEEEEEESCEEEEEEEEEEEE-CSSEEEEEES
T ss_pred cccccEEcCCCeEEEECCCccCCCccEEEe-cCCceEEEee
Confidence 345555554445555555555555544444 3333444444
No 71
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=60.24 E-value=6.6 Score=42.48 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=46.1
Q ss_pred EEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEe---ecCceEEEEeeE----eec--CCCCeEEee
Q 013239 205 ITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISI---FGSSHIWIDHNS----LSN--CADGLIDAI 275 (447)
Q Consensus 205 i~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI---~gs~nVWIDHcS----~S~--~~DGliDi~ 275 (447)
|.+.+++ |++|+|++..| .-.|.+ ..++||.|++|+ +.. -.||.
T Consensus 180 l~f~~c~---I~GITi~NSDP--------------------~w~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI---- 232 (600)
T 2x6w_A 180 GRSYNCS---VTGITFQNGDV--------------------TWAITLGWNGYGSNCYVRKCRFINLVNSSVNADHS---- 232 (600)
T ss_dssp CSEEEEE---EESCEEESCCC--------------------SCSEEECBTTBEEEEEEESCEEECCCCCSSCCCEE----
T ss_pred EEEeeeE---EeCeEEECCCC--------------------ccEEEeCCCCCcccEEEeCeEEcceEecCCCCCEE----
Confidence 3455555 89999886411 234667 789999999999 443 35665
Q ss_pred eCCceEEEEcceeccCCeeeEe-cCC
Q 013239 276 MGSTAITVSNNYFTHHNEVMLL-GHS 300 (447)
Q Consensus 276 ~gS~~ITISnn~f~~H~k~mLi-G~s 300 (447)
|+|++|.|..-+.+.-| ...
T Consensus 233 -----V~I~nc~I~tGDDCIAI~KSG 253 (600)
T 2x6w_A 233 -----TVYVNCPYSGVESCYFSMSSS 253 (600)
T ss_dssp -----EEEECSSSEEEESCEEECCCT
T ss_pred -----EEEEeeEEecCCcEEEEecCC
Confidence 99999999988777777 543
No 72
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=41.81 E-value=43 Score=33.11 Aligned_cols=60 Identities=12% Similarity=0.192 Sum_probs=43.0
Q ss_pred ceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEE
Q 013239 203 ACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAIT 282 (447)
Q Consensus 203 ~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~IT 282 (447)
..|.+ .+++++++|.+|.+ ..|.|...++++ .+.+|.+. |.+|++.|.-..-
T Consensus 115 vAl~v-~~d~~~f~~c~f~g----------------------~QDTLy~~~~r~-~~~~c~I~----G~vDFIfG~~~a~ 166 (319)
T 1gq8_A 115 VALRV-GSDLSAFYRCDILA----------------------YQDSLYVHSNRQ-FFINCFIA----GTVDFIFGNAAVV 166 (319)
T ss_dssp CSEEE-CCTTEEEEEEEEEC----------------------STTCEEECSSEE-EEESCEEE----ESSSCEEESCEEE
T ss_pred EEEEe-cCCcEEEEEeEECc----------------------cceeeeecCccE-EEEecEEE----eeeeEEecCCcEE
Confidence 35666 58999999999984 246777666554 77888887 4556666666788
Q ss_pred EEcceecc
Q 013239 283 VSNNYFTH 290 (447)
Q Consensus 283 ISnn~f~~ 290 (447)
+++|.|..
T Consensus 167 f~~c~i~~ 174 (319)
T 1gq8_A 167 LQDCDIHA 174 (319)
T ss_dssp EESCEEEE
T ss_pred EEeeEEEE
Confidence 88888863
No 73
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=40.89 E-value=53 Score=32.46 Aligned_cols=60 Identities=13% Similarity=0.251 Sum_probs=42.8
Q ss_pred ceEEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEE
Q 013239 203 ACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAIT 282 (447)
Q Consensus 203 ~gi~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~IT 282 (447)
..|.+ .+++++++|.+|.+ ..|.|...++++ .+.+|.+. |.+|++.|.-..-
T Consensus 111 vAl~v-~~d~~~f~~c~f~g----------------------~QDTLy~~~~r~-~~~~c~I~----G~vDFIfG~~~av 162 (317)
T 1xg2_A 111 VALRV-GADMSVINRCRIDA----------------------YQDTLYAHSQRQ-FYRDSYVT----GTVDFIFGNAAVV 162 (317)
T ss_dssp CSEEE-CCTTEEEESCEEEC----------------------STTCEEECSSEE-EEESCEEE----ESSSCEEECCEEE
T ss_pred EEEEE-eCCcEEEEEeEeCc----------------------cccceeecCccE-EEEeeEEE----eceeEEcCCceEE
Confidence 45666 58999999999984 246666665554 77778777 5566666666777
Q ss_pred EEcceecc
Q 013239 283 VSNNYFTH 290 (447)
Q Consensus 283 ISnn~f~~ 290 (447)
+++|.|..
T Consensus 163 f~~c~i~~ 170 (317)
T 1xg2_A 163 FQKCQLVA 170 (317)
T ss_dssp EESCEEEE
T ss_pred EeeeEEEE
Confidence 88888753
No 74
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=27.04 E-value=2.9e+02 Score=27.92 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=63.1
Q ss_pred CCcEEEccCceEEEecCceEEEeccccEEEEceEEEeccCCC-------------CcccccCCCCc-CCcccCCCCeEEe
Q 013239 186 SFKTIDGRGVNVHIANGACITIQFITNVIIHGINIHDCKPTG-------------NAMVRSSPSHY-GWRTMADGDAISI 251 (447)
Q Consensus 186 SnkTI~G~gA~~~I~~G~gi~i~~a~NVIIRnL~i~~~~pg~-------------~~~i~~s~~~~-g~r~~~d~DaIsI 251 (447)
|++||.|.-+.-.. .|-.+.+.+.++|-+.+++|.+.+-.+ +-+||+--..| |+.+....-++-.
T Consensus 142 s~~ti~~nk~~ds~-qg~qvs~~gg~dvsv~~i~fsn~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~ 220 (542)
T 2x3h_A 142 SNITVESNKATDTT-QGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLA 220 (542)
T ss_dssp EEEEEECCCSSTTC-BCCSEEEESCEEEEEEEEEEEEECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEE
T ss_pred eeEEEecccCCccc-cceEEEecCCCcceEeeeeeeecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEe
Confidence 45666665332222 356677777889999999998765110 11122111111 2221122223334
Q ss_pred ecCceEEEEeeEeecC-CCCeEEeeeCCceEEEEcceeccCCeeeEecC
Q 013239 252 FGSSHIWIDHNSLSNC-ADGLIDAIMGSTAITVSNNYFTHHNEVMLLGH 299 (447)
Q Consensus 252 ~gs~nVWIDHcS~S~~-~DGliDi~~gS~~ITISnn~f~~H~k~mLiG~ 299 (447)
+.+.|-.||.+-..+. .-|.+.++..+.+-.|||-+=.+-..+.--|.
T Consensus 221 dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~yngt 269 (542)
T 2x3h_A 221 DSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVTYNGT 269 (542)
T ss_dssp ESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEEEC
T ss_pred ccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEEECCc
Confidence 5677888888877764 67888887766666667665555555544443
No 75
>1vib_A Neurotoxin B-IV; hydroxylation; HET: HYP; NMR {Cerebratulus lacteus} SCOP: g.2.2.1
Probab=22.97 E-value=9.4 Score=28.15 Aligned_cols=22 Identities=36% Similarity=0.875 Sum_probs=17.3
Q ss_pred cccccccCcccccccccccc-Cc
Q 013239 101 IDDCWRCDSRWYLRRKRLAD-CA 122 (447)
Q Consensus 101 id~cwr~~~~w~~~r~~lA~-~A 122 (447)
-|+|-||+..|+..|-.-|. |+
T Consensus 20 yd~ci~cqgkwagkrgkcaahc~ 42 (55)
T 1vib_A 20 YDLCIRCQGKWAGKRGKCAAHCI 42 (55)
T ss_dssp HHHHCCTTGGGTTTHHHHHHHHH
T ss_pred hhHHheecceeccccCcchhhee
Confidence 48999999999988766543 44
No 76
>3n6z_A Putative immunoglobulin A1 protease; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacteroides ovatus}
Probab=22.96 E-value=59 Score=32.86 Aligned_cols=116 Identities=15% Similarity=0.159 Sum_probs=46.7
Q ss_pred ccCCCCCccccccccCccccccccccccCc---ccccC--ccccCCCC--eEEEEcCCCCCCCCCCCCcchhhhhcCCCC
Q 013239 93 FSCGTGNPIDDCWRCDSRWYLRRKRLADCA---IGFGR--NAIGGRDG--RYYVVSDPGDDDAVNPKPGTLRHAVIQDRP 165 (447)
Q Consensus 93 ~~c~~~n~id~cwr~~~~w~~~r~~lA~~A---~GFG~--~ttGG~gG--~vy~VT~~~D~~~~~~~pGtLR~Av~q~~P 165 (447)
++|.--||+|..=|. |-|. ...+++- .|-.+ .-.+|.|- ..|.+++.+|... |++.+....-
T Consensus 2 ~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~f~~G~GT~~~pY~I~t~~dL~~-------~~~~vn~g~~ 70 (363)
T 3n6z_A 2 ISCSDPNPLDSYTRV-PFEK---TETDDGNGDGDGDGAGGLFEKGNGTDSKPYMIMNATQIRN-------MRSVLKSGMK 70 (363)
T ss_dssp ---------CCSSSC-C-----------------CHHHHHTSSBCCSSSSSCEEECSHHHHTT-------HHHHCCTTSC
T ss_pred cccCCCCcccccccC-CCCc---cccccCCCCCCCCCcccccCCCCCCcCccEEeCCHHHHHH-------HHHhhccCCc
Confidence 479999999998875 5554 2333311 11111 23445443 4799999877311 4444433222
Q ss_pred eEEEEeeceEEEeCce---EEec-----CCc-EEEccCceEEEecCceEE------EeccccEEEEceEEEecc
Q 013239 166 LWIVFKRDMVITLKQE---LIMN-----SFK-TIDGRGVNVHIANGACIT------IQFITNVIIHGINIHDCK 224 (447)
Q Consensus 166 ~~IVF~~~g~I~L~~~---L~I~-----Snk-TI~G~gA~~~I~~G~gi~------i~~a~NVIIRnL~i~~~~ 224 (447)
...+... .|+|... ..|. +++ |.+|+|.. |. +.-|. +-..-+-.||||+|.++.
T Consensus 71 ~~~~L~~--DIdl~~~~~w~PIG~~~~~~F~G~FDG~ght--I~-nL~i~~~~~~GLFg~i~g~I~Nl~l~~~~ 139 (363)
T 3n6z_A 71 VYFQLGA--DIDMAGIDDWQSLNGSGDFPYEIDFDGDSHV--IK-NFKCSAGDYPSFFGVLCGDCRNVGFVNAS 139 (363)
T ss_dssp EEEEESS--CEECTTCCCCCCTTCSTTCCCCEEEEEEEEE--EE-SCEECSSSSCSSSSEECEEEEEEEEEEEE
T ss_pred eEEEEeC--CEecCCCcccccCccCCCCceEEEECCCCeE--Ee-eeEcCCCCceeEEEEeeEEEEEEEEEeee
Confidence 3344433 3777643 2342 232 77777644 32 21111 001112478888887653
No 77
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=20.35 E-value=1.7e+02 Score=27.33 Aligned_cols=68 Identities=9% Similarity=0.116 Sum_probs=45.5
Q ss_pred EEEeccccEEEEceEEEeccCCCCcccccCCCCcCCcccCCCCeEEeecCceEEEEeeEeecCCCCeEEeeeCCceEEEE
Q 013239 205 ITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITVS 284 (447)
Q Consensus 205 i~i~~a~NVIIRnL~i~~~~pg~~~~i~~s~~~~g~r~~~d~DaIsI~gs~nVWIDHcS~S~~~DGliDi~~gS~~ITIS 284 (447)
|...+...|+|+|....+.- .. || +-+.. .-.++|.||+++++.....++-.-.....++++
T Consensus 113 ~Q~Ng~Gtv~I~nF~~~~~G----Kl---------~R--SCGnc---~~~r~v~i~~v~~~n~k~~l~rtdS~~~~~~~~ 174 (196)
T 3t9g_A 113 FQLNAPCTFKVKNFTATNIG----KL---------VR--QNGNT---TFKVVIYLEDVTLNNVKSCVAKSDSPVSELWYH 174 (196)
T ss_dssp EEECSSEEEEEEEEEEEEEE----EE---------EE--ECTTC---CSCEEEEEEEEEEEEEEEEEEECCCTTCEEEEE
T ss_pred EEECCCceEEEeeEEEccCC----EE---------EE--cCCCC---CceeEEEEeCeEEeCCEEEEEEcCCCCCEEEEe
Confidence 44446778899998887631 12 22 23332 245899999999999888877764445677777
Q ss_pred cceecc
Q 013239 285 NNYFTH 290 (447)
Q Consensus 285 nn~f~~ 290 (447)
|...++
T Consensus 175 n~~~~~ 180 (196)
T 3t9g_A 175 NLNVNN 180 (196)
T ss_dssp EEEEEE
T ss_pred cceecC
Confidence 777664
Done!