Query 013240
Match_columns 447
No_of_seqs 227 out of 3022
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 06:50:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us3_A Calsequestrin-1; calciu 100.0 6.1E-45 2.1E-49 356.0 35.1 321 39-373 9-354 (367)
2 2r2j_A Thioredoxin domain-cont 100.0 2.8E-45 9.6E-50 360.8 30.8 323 42-378 4-340 (382)
3 1sji_A Calsequestrin 2, calseq 100.0 1.4E-43 4.9E-48 344.7 35.5 318 39-371 7-350 (350)
4 3f8u_A Protein disulfide-isome 100.0 6.4E-42 2.2E-46 347.6 33.6 332 43-391 1-361 (481)
5 2b5e_A Protein disulfide-isome 100.0 2.6E-40 8.8E-45 337.6 32.8 334 39-391 10-367 (504)
6 3apo_A DNAJ homolog subfamily 100.0 4.3E-32 1.5E-36 290.9 32.4 315 38-372 111-547 (780)
7 3apo_A DNAJ homolog subfamily 100.0 1.3E-29 4.5E-34 271.7 32.5 314 43-368 440-768 (780)
8 3ed3_A Protein disulfide-isome 100.0 2.7E-30 9.3E-35 244.5 22.9 216 40-262 14-279 (298)
9 3idv_A Protein disulfide-isome 100.0 5.3E-27 1.8E-31 215.7 22.5 210 39-254 11-239 (241)
10 3q6o_A Sulfhydryl oxidase 1; p 99.9 2.2E-24 7.5E-29 198.7 20.6 211 36-249 5-237 (244)
11 3ec3_A Protein disulfide-isome 99.9 6.4E-24 2.2E-28 196.0 23.0 224 148-384 3-248 (250)
12 2h8l_A Protein disulfide-isome 99.9 5.8E-24 2E-28 196.7 19.4 225 147-385 2-251 (252)
13 3t58_A Sulfhydryl oxidase 1; o 99.9 6.1E-22 2.1E-26 200.1 19.9 210 37-249 6-237 (519)
14 3h79_A Thioredoxin-like protei 99.9 4.7E-22 1.6E-26 163.8 14.4 110 39-148 11-126 (127)
15 4f9z_D Endoplasmic reticulum r 99.9 2E-21 6.8E-26 176.7 19.3 207 150-369 8-227 (227)
16 2dj1_A Protein disulfide-isome 99.9 2.7E-21 9.3E-26 162.0 15.0 120 36-155 10-129 (140)
17 3zzx_A Thioredoxin; oxidoreduc 99.9 4E-21 1.4E-25 152.3 13.5 99 45-148 2-104 (105)
18 1mek_A Protein disulfide isome 99.8 5E-21 1.7E-25 155.5 9.4 115 39-153 3-120 (120)
19 3uem_A Protein disulfide-isome 99.8 1.4E-19 4.7E-24 176.4 21.0 231 147-391 13-258 (361)
20 3uem_A Protein disulfide-isome 99.8 2.1E-18 7.3E-23 168.0 28.8 298 41-365 15-355 (361)
21 3uvt_A Thioredoxin domain-cont 99.8 4E-20 1.4E-24 148.1 13.6 106 42-148 4-110 (111)
22 3gnj_A Thioredoxin domain prot 99.8 7.1E-20 2.4E-24 146.7 14.3 106 42-150 3-110 (111)
23 1x5e_A Thioredoxin domain cont 99.8 7.9E-20 2.7E-24 150.1 14.1 112 42-157 6-117 (126)
24 3tco_A Thioredoxin (TRXA-1); d 99.8 1.1E-19 3.9E-24 144.8 14.2 105 42-149 3-108 (109)
25 2voc_A Thioredoxin; electron t 99.8 1.2E-19 4.1E-24 145.8 14.1 105 44-152 2-107 (112)
26 2ywm_A Glutaredoxin-like prote 99.8 1.3E-19 4.3E-24 165.1 15.9 191 51-250 9-218 (229)
27 2trx_A Thioredoxin; electron t 99.8 3.6E-19 1.2E-23 141.8 14.8 104 43-149 2-107 (108)
28 3die_A Thioredoxin, TRX; elect 99.8 2.8E-19 9.4E-24 141.9 13.8 103 43-149 3-106 (106)
29 2yzu_A Thioredoxin; redox prot 99.8 2.8E-19 9.7E-24 142.4 13.7 106 43-151 1-107 (109)
30 1nsw_A Thioredoxin, TRX; therm 99.8 2.5E-19 8.5E-24 142.0 13.2 103 44-149 1-104 (105)
31 1x5d_A Protein disulfide-isome 99.8 3.2E-19 1.1E-23 147.8 14.4 109 42-150 6-117 (133)
32 2dml_A Protein disulfide-isome 99.8 1.8E-19 6.2E-24 148.7 12.9 113 35-150 9-124 (130)
33 1a8l_A Protein disulfide oxido 99.8 2.6E-19 8.8E-24 162.6 15.0 192 51-250 10-224 (226)
34 3apq_A DNAJ homolog subfamily 99.8 1.3E-19 4.4E-24 162.7 12.6 118 38-158 92-210 (210)
35 2ppt_A Thioredoxin-2; thiredox 99.8 5E-19 1.7E-23 150.8 15.3 108 41-151 45-153 (155)
36 2qsi_A Putative hydrogenase ex 99.8 1.9E-19 6.4E-24 147.1 11.9 104 43-149 15-122 (137)
37 2i4a_A Thioredoxin; acidophIle 99.8 6.8E-19 2.3E-23 139.8 14.9 103 43-148 2-106 (107)
38 3hz4_A Thioredoxin; NYSGXRC, P 99.8 4.5E-19 1.5E-23 148.5 13.8 106 42-150 5-112 (140)
39 2e0q_A Thioredoxin; electron t 99.8 5.7E-19 2E-23 139.3 13.7 102 45-150 1-103 (104)
40 2o8v_B Thioredoxin 1; disulfid 99.8 5.4E-19 1.8E-23 145.6 13.7 107 40-149 19-127 (128)
41 2qgv_A Hydrogenase-1 operon pr 99.8 1.2E-19 4.2E-24 148.8 9.6 108 44-154 18-129 (140)
42 2l5l_A Thioredoxin; structural 99.8 7.6E-19 2.6E-23 146.3 14.6 107 42-151 8-127 (136)
43 3qfa_C Thioredoxin; protein-pr 99.8 2.6E-19 9E-24 144.8 11.4 102 43-149 12-116 (116)
44 3ga4_A Dolichyl-diphosphooligo 99.8 4.4E-19 1.5E-23 152.4 13.3 113 42-154 17-157 (178)
45 3p2a_A Thioredoxin 2, putative 99.8 7.1E-19 2.4E-23 148.7 14.3 108 41-151 36-144 (148)
46 3hxs_A Thioredoxin, TRXP; elec 99.8 4.5E-19 1.5E-23 148.6 13.0 109 39-150 18-139 (141)
47 2av4_A Thioredoxin-like protei 99.8 6E-19 2.1E-23 146.2 12.9 102 45-149 23-138 (160)
48 1thx_A Thioredoxin, thioredoxi 99.8 1.3E-18 4.6E-23 140.0 14.8 107 42-151 6-114 (115)
49 1t00_A Thioredoxin, TRX; redox 99.8 1.2E-18 4.1E-23 139.8 14.2 106 42-150 4-111 (112)
50 1w4v_A Thioredoxin, mitochondr 99.8 1E-18 3.4E-23 142.0 13.8 107 40-149 10-118 (119)
51 4euy_A Uncharacterized protein 99.8 2E-19 6.7E-24 142.8 8.9 97 49-149 7-104 (105)
52 3idv_A Protein disulfide-isome 99.8 8.7E-19 3E-23 160.6 14.4 112 42-153 129-240 (241)
53 3f3q_A Thioredoxin-1; His TAG, 99.8 1.9E-18 6.7E-23 138.0 13.9 102 43-149 7-109 (109)
54 1gh2_A Thioredoxin-like protei 99.8 2.5E-18 8.6E-23 136.8 14.4 101 44-149 2-106 (107)
55 1r26_A Thioredoxin; redox-acti 99.8 1.3E-18 4.6E-23 142.5 12.9 101 45-150 21-123 (125)
56 1dby_A Chloroplast thioredoxin 99.8 1.6E-18 5.4E-23 137.8 12.9 103 44-149 2-106 (107)
57 2pu9_C TRX-F, thioredoxin F-ty 99.8 2E-18 6.7E-23 138.3 13.3 103 42-149 4-110 (111)
58 1ep7_A Thioredoxin CH1, H-type 99.8 2.8E-18 9.7E-23 137.5 13.9 104 43-150 2-111 (112)
59 1fb6_A Thioredoxin M; electron 99.8 2.8E-18 9.7E-23 135.7 13.6 103 44-149 1-105 (105)
60 1syr_A Thioredoxin; SGPP, stru 99.8 2.7E-18 9.3E-23 137.8 13.6 103 42-149 8-111 (112)
61 3d6i_A Monothiol glutaredoxin- 99.8 3.4E-18 1.2E-22 137.2 13.7 104 44-150 1-109 (112)
62 2i1u_A Thioredoxin, TRX, MPT46 99.8 2.4E-18 8.2E-23 140.0 12.8 106 42-150 11-118 (121)
63 1xwb_A Thioredoxin; dimerizati 99.8 5.5E-18 1.9E-22 134.3 14.5 101 45-149 2-106 (106)
64 2c0g_A ERP29 homolog, windbeut 99.8 3.1E-18 1.1E-22 155.9 14.4 107 40-151 13-133 (248)
65 2dj3_A Protein disulfide-isome 99.8 7.8E-19 2.7E-23 145.5 9.2 112 41-153 5-121 (133)
66 3aps_A DNAJ homolog subfamily 99.8 1.3E-18 4.5E-23 141.9 10.3 107 42-151 2-114 (122)
67 2xc2_A Thioredoxinn; oxidoredu 99.8 5.9E-18 2E-22 136.9 13.9 100 44-149 14-117 (117)
68 3m9j_A Thioredoxin; oxidoreduc 99.8 5.3E-18 1.8E-22 134.2 13.3 99 46-149 3-105 (105)
69 2djj_A PDI, protein disulfide- 99.8 1.3E-18 4.6E-23 141.6 9.9 108 41-151 5-118 (121)
70 2vlu_A Thioredoxin, thioredoxi 99.8 7.5E-18 2.6E-22 137.3 14.2 103 43-150 13-120 (122)
71 1faa_A Thioredoxin F; electron 99.8 8.3E-18 2.8E-22 137.5 14.0 103 42-149 17-123 (124)
72 3qou_A Protein YBBN; thioredox 99.8 5.6E-18 1.9E-22 159.6 14.6 107 42-151 6-115 (287)
73 2vim_A Thioredoxin, TRX; thior 99.8 9.8E-18 3.4E-22 132.3 13.5 100 45-149 1-104 (104)
74 3dxb_A Thioredoxin N-terminall 99.8 7.9E-18 2.7E-22 152.4 14.7 111 39-152 8-120 (222)
75 2wz9_A Glutaredoxin-3; protein 99.8 8.4E-18 2.9E-22 143.0 13.9 105 42-151 11-119 (153)
76 1oaz_A Thioredoxin 1; immune s 99.8 1.8E-18 6.1E-23 141.4 9.2 104 43-149 3-122 (123)
77 1v98_A Thioredoxin; oxidoreduc 99.8 8.1E-18 2.8E-22 140.8 13.5 106 43-151 33-139 (140)
78 1xfl_A Thioredoxin H1; AT3G510 99.8 1.6E-17 5.5E-22 135.9 14.6 104 41-149 14-123 (124)
79 3emx_A Thioredoxin; structural 99.7 4E-18 1.4E-22 141.7 9.9 106 41-153 14-129 (135)
80 2qc7_A ERP31, ERP28, endoplasm 99.7 2E-17 6.7E-22 150.1 15.2 102 43-149 5-118 (240)
81 2l6c_A Thioredoxin; oxidoreduc 99.7 5.3E-18 1.8E-22 135.7 9.9 102 45-151 5-107 (110)
82 3ul3_B Thioredoxin, thioredoxi 99.7 6.3E-18 2.2E-22 139.1 10.2 98 47-147 29-127 (128)
83 2oe3_A Thioredoxin-3; electron 99.7 1.6E-17 5.6E-22 133.7 12.3 100 43-147 12-113 (114)
84 2j23_A Thioredoxin; immune pro 99.7 1.5E-17 5E-22 135.5 12.1 108 39-149 11-120 (121)
85 2es7_A Q8ZP25_salty, putative 99.7 2.7E-18 9.2E-23 143.6 7.7 111 44-158 18-133 (142)
86 3gix_A Thioredoxin-like protei 99.7 1.7E-17 5.8E-22 140.3 12.8 98 49-149 10-120 (149)
87 2vm1_A Thioredoxin, thioredoxi 99.7 3.5E-17 1.2E-21 132.3 14.1 105 42-151 5-115 (118)
88 2dj0_A Thioredoxin-related tra 99.7 1.1E-18 3.8E-23 145.5 4.2 104 42-147 6-118 (137)
89 3evi_A Phosducin-like protein 99.7 3.9E-17 1.3E-21 131.7 13.1 98 43-147 3-111 (118)
90 1ti3_A Thioredoxin H, PTTRXH1; 99.7 2.8E-17 9.5E-22 131.8 11.9 103 42-149 3-111 (113)
91 1zma_A Bacterocin transport ac 99.7 8.4E-18 2.9E-22 136.3 8.7 102 43-147 12-118 (118)
92 3d22_A TRXH4, thioredoxin H-ty 99.7 5.7E-17 1.9E-21 135.4 13.8 106 41-151 22-133 (139)
93 2l57_A Uncharacterized protein 99.7 2.5E-17 8.7E-22 135.0 9.7 106 44-152 5-119 (126)
94 1qgv_A Spliceosomal protein U5 99.7 9.5E-17 3.2E-21 134.5 12.9 97 49-148 10-119 (142)
95 2f51_A Thioredoxin; electron t 99.7 1E-16 3.4E-21 129.9 12.3 105 43-152 3-115 (118)
96 3cxg_A Putative thioredoxin; m 99.7 7.7E-17 2.6E-21 133.5 11.1 106 39-150 16-129 (133)
97 3f8u_A Protein disulfide-isome 99.7 7.6E-15 2.6E-19 148.4 27.8 301 43-371 110-465 (481)
98 2dbc_A PDCL2, unnamed protein 99.7 2.2E-16 7.7E-21 131.1 12.3 101 41-148 8-119 (135)
99 2hls_A Protein disulfide oxido 99.7 4.5E-16 1.5E-20 142.6 15.0 192 51-252 15-226 (243)
100 1a8l_A Protein disulfide oxido 99.7 4.6E-16 1.6E-20 141.1 12.9 105 45-149 118-225 (226)
101 2yj7_A LPBCA thioredoxin; oxid 99.5 5.7E-18 1.9E-22 134.0 0.0 102 44-148 2-105 (106)
102 3qcp_A QSOX from trypanosoma b 99.7 2.3E-17 8E-22 162.3 3.4 111 39-150 19-139 (470)
103 3bj5_A Protein disulfide-isome 99.7 1.1E-15 3.7E-20 128.3 12.8 127 246-378 7-138 (147)
104 2kuc_A Putative disulphide-iso 99.6 4E-16 1.4E-20 128.5 9.6 105 45-152 8-123 (130)
105 2trc_P Phosducin, MEKA, PP33; 99.6 3.4E-16 1.2E-20 140.4 9.8 102 42-148 98-211 (217)
106 4f9z_D Endoplasmic reticulum r 99.6 1.7E-14 6E-19 130.7 19.2 194 43-250 9-223 (227)
107 2b5e_A Protein disulfide-isome 99.6 2.7E-15 9.1E-20 152.6 15.1 112 41-154 356-471 (504)
108 1wmj_A Thioredoxin H-type; str 99.6 4.3E-17 1.5E-21 134.2 1.0 108 39-151 10-123 (130)
109 3fk8_A Disulphide isomerase; A 99.6 2.3E-15 7.9E-20 124.5 10.9 94 53-149 22-132 (133)
110 2fwh_A Thiol:disulfide interch 99.6 1.4E-15 4.6E-20 126.1 9.5 98 49-150 18-128 (134)
111 1a0r_P Phosducin, MEKA, PP33; 99.6 2.4E-15 8.1E-20 136.7 11.9 103 41-148 110-224 (245)
112 1fo5_A Thioredoxin; disulfide 99.6 2.6E-15 9E-20 113.6 9.4 83 61-149 3-85 (85)
113 2djk_A PDI, protein disulfide- 99.6 2.8E-15 9.4E-20 124.1 9.9 106 44-153 7-118 (133)
114 1wou_A Thioredoxin -related pr 99.6 4.4E-15 1.5E-19 121.1 9.9 100 44-147 6-122 (123)
115 2ywm_A Glutaredoxin-like prote 99.6 3.6E-15 1.2E-19 135.5 10.3 102 43-150 118-220 (229)
116 3iv4_A Putative oxidoreductase 99.6 7.1E-15 2.4E-19 115.1 10.1 98 43-145 6-111 (112)
117 1nho_A Probable thioredoxin; b 99.6 3.7E-15 1.3E-19 112.8 8.1 82 62-149 3-84 (85)
118 3kp8_A Vkorc1/thioredoxin doma 99.6 2.6E-15 8.8E-20 118.8 5.7 76 60-148 12-93 (106)
119 2hls_A Protein disulfide oxido 99.6 3.2E-14 1.1E-18 130.2 13.8 105 47-154 124-230 (243)
120 2lst_A Thioredoxin; structural 99.2 1.9E-15 6.6E-20 124.4 0.0 99 50-151 9-117 (130)
121 3f9u_A Putative exported cytoc 99.5 3.7E-14 1.3E-18 122.8 7.8 103 44-149 27-165 (172)
122 3dml_A Putative uncharacterize 99.5 5.8E-14 2E-18 111.5 6.2 90 59-149 17-109 (116)
123 2ju5_A Thioredoxin disulfide i 99.5 3.9E-13 1.3E-17 114.0 11.5 89 58-150 45-152 (154)
124 1lu4_A Soluble secreted antige 99.4 3.7E-13 1.3E-17 111.1 10.5 87 59-149 23-135 (136)
125 2djk_A PDI, protein disulfide- 99.4 7.8E-13 2.7E-17 109.2 12.0 122 250-378 3-126 (133)
126 1sen_A Thioredoxin-like protei 99.4 6.5E-14 2.2E-18 120.2 5.5 96 51-149 37-147 (164)
127 1zzo_A RV1677; thioredoxin fol 99.4 5.6E-13 1.9E-17 109.9 11.0 88 59-150 24-135 (136)
128 1ilo_A Conserved hypothetical 99.4 3.2E-13 1.1E-17 100.0 8.5 74 63-145 2-76 (77)
129 2b5x_A YKUV protein, TRXY; thi 99.4 1.5E-12 5.2E-17 109.0 12.8 103 46-151 15-146 (148)
130 3erw_A Sporulation thiol-disul 99.4 2.2E-12 7.6E-17 107.6 12.8 86 59-146 33-145 (145)
131 3kp9_A Vkorc1/thioredoxin doma 99.4 5.7E-13 2E-17 123.4 9.2 84 50-148 189-278 (291)
132 3or5_A Thiol:disulfide interch 99.4 2E-12 6.7E-17 110.6 11.9 91 59-151 33-152 (165)
133 1sji_A Calsequestrin 2, calseq 99.4 1.9E-11 6.4E-16 118.2 19.7 197 43-251 123-345 (350)
134 2h30_A Thioredoxin, peptide me 99.4 1.4E-12 4.6E-17 111.6 10.3 105 44-150 22-156 (164)
135 2f9s_A Thiol-disulfide oxidore 99.4 7.2E-12 2.5E-16 105.6 13.8 93 59-153 25-141 (151)
136 3us3_A Calsequestrin-1; calciu 99.4 1.7E-11 5.7E-16 119.2 17.9 199 43-253 125-349 (367)
137 3ph9_A Anterior gradient prote 99.4 6.9E-13 2.4E-17 111.4 6.9 97 51-149 35-144 (151)
138 3fkf_A Thiol-disulfide oxidore 99.3 5.9E-12 2E-16 105.4 11.5 109 33-150 11-146 (148)
139 2h8l_A Protein disulfide-isome 99.3 5.1E-11 1.7E-15 109.6 18.4 192 43-251 6-229 (252)
140 3ira_A Conserved protein; meth 99.3 1.5E-12 5.3E-17 111.6 7.3 82 47-131 26-119 (173)
141 3raz_A Thioredoxin-related pro 99.3 8.1E-12 2.8E-16 105.3 11.4 91 59-151 23-141 (151)
142 1z6n_A Hypothetical protein PA 99.3 4.7E-12 1.6E-16 108.4 9.5 89 46-138 39-132 (167)
143 2lja_A Putative thiol-disulfid 99.3 1.3E-11 4.4E-16 104.0 12.1 91 59-151 29-144 (152)
144 2fgx_A Putative thioredoxin; N 99.3 4.3E-12 1.5E-16 99.3 7.5 77 62-145 30-106 (107)
145 3gl3_A Putative thiol:disulfid 99.3 4.4E-11 1.5E-15 100.7 13.9 91 59-151 27-143 (152)
146 3hcz_A Possible thiol-disulfid 99.3 6.8E-12 2.3E-16 105.1 8.8 88 59-148 30-144 (148)
147 2l5o_A Putative thioredoxin; s 99.3 1.2E-11 4E-16 104.4 10.2 91 59-151 27-142 (153)
148 4evm_A Thioredoxin family prot 99.3 3.3E-11 1.1E-15 99.1 12.3 87 59-148 21-137 (138)
149 3ia1_A THIO-disulfide isomeras 99.3 1.8E-11 6.1E-16 103.4 10.8 87 61-152 31-146 (154)
150 1ttz_A Conserved hypothetical 99.3 4.9E-12 1.7E-16 95.6 6.4 74 64-149 3-76 (87)
151 3lor_A Thiol-disulfide isomera 99.3 4.4E-11 1.5E-15 101.6 12.9 91 59-151 29-156 (160)
152 2lrn_A Thiol:disulfide interch 99.3 3.6E-11 1.2E-15 101.4 12.2 101 39-150 15-141 (152)
153 3ewl_A Uncharacterized conserv 99.3 4.7E-11 1.6E-15 99.3 12.3 106 33-149 7-140 (142)
154 3eyt_A Uncharacterized protein 99.3 5.7E-11 2E-15 100.7 12.5 91 59-151 27-153 (158)
155 2b1k_A Thiol:disulfide interch 99.2 1.7E-11 5.7E-16 105.3 8.8 102 42-149 30-159 (168)
156 3hdc_A Thioredoxin family prot 99.2 6.2E-11 2.1E-15 100.7 11.2 90 59-150 40-152 (158)
157 1kng_A Thiol:disulfide interch 99.2 2.6E-11 9E-16 102.5 8.9 86 59-149 41-151 (156)
158 3ha9_A Uncharacterized thiored 99.2 5.6E-11 1.9E-15 101.7 10.1 86 59-149 36-163 (165)
159 3lwa_A Secreted thiol-disulfid 99.2 7.5E-11 2.6E-15 102.8 11.1 92 59-150 58-181 (183)
160 3kcm_A Thioredoxin family prot 99.2 1.4E-10 4.7E-15 97.8 12.3 108 34-150 9-143 (154)
161 3eur_A Uncharacterized protein 99.2 7.6E-11 2.6E-15 98.2 10.4 83 60-146 31-141 (142)
162 3ec3_A Protein disulfide-isome 99.2 6.2E-10 2.1E-14 102.1 16.1 192 43-251 6-227 (250)
163 3ed3_A Protein disulfide-isome 99.2 1.4E-09 4.6E-14 102.4 18.5 204 150-367 16-267 (298)
164 3fw2_A Thiol-disulfide oxidore 99.2 3.9E-10 1.3E-14 94.7 13.0 109 32-149 10-147 (150)
165 2lrt_A Uncharacterized protein 99.2 3.8E-10 1.3E-14 95.2 12.9 84 59-144 34-142 (152)
166 1i5g_A Tryparedoxin II; electr 99.1 1.9E-10 6.4E-15 96.0 9.6 72 59-131 27-124 (144)
167 1o8x_A Tryparedoxin, TRYX, TXN 99.1 2.3E-10 7.8E-15 95.7 9.4 72 59-131 27-124 (146)
168 1jfu_A Thiol:disulfide interch 99.1 1.2E-09 4.1E-14 95.3 13.9 92 59-152 59-182 (186)
169 1o73_A Tryparedoxin; electron 99.1 2.4E-10 8.2E-15 95.2 8.6 74 59-133 27-126 (144)
170 3kh7_A Thiol:disulfide interch 99.1 3.1E-10 1.1E-14 98.2 9.5 85 59-149 57-166 (176)
171 2hyx_A Protein DIPZ; thioredox 99.1 6.5E-10 2.2E-14 106.5 12.2 89 59-149 81-198 (352)
172 3s9f_A Tryparedoxin; thioredox 99.1 4.2E-10 1.5E-14 96.3 9.6 72 59-131 47-144 (165)
173 2lus_A Thioredoxion; CR-Trp16, 98.6 2E-11 6.8E-16 101.6 0.0 78 60-137 25-129 (143)
174 2ywi_A Hypothetical conserved 99.0 1.8E-09 6.3E-14 94.9 12.3 91 58-150 44-174 (196)
175 1wjk_A C330018D20RIK protein; 99.0 5E-10 1.7E-14 87.2 7.0 80 60-150 15-96 (100)
176 2cvb_A Probable thiol-disulfid 99.0 2.1E-09 7.3E-14 93.9 11.8 90 59-151 32-160 (188)
177 2e7p_A Glutaredoxin; thioredox 99.0 2.1E-10 7E-15 92.0 4.8 87 51-148 11-106 (116)
178 2dlx_A UBX domain-containing p 99.0 2.2E-09 7.6E-14 90.0 10.7 95 51-149 29-135 (153)
179 1hyu_A AHPF, alkyl hydroperoxi 99.0 3.5E-09 1.2E-13 107.7 13.2 97 45-148 101-198 (521)
180 3u5r_E Uncharacterized protein 99.0 3.5E-09 1.2E-13 95.0 11.5 88 60-150 58-187 (218)
181 4fo5_A Thioredoxin-like protei 99.0 3.2E-09 1.1E-13 88.3 10.1 84 59-146 31-141 (143)
182 2k8s_A Thioredoxin; dimer, str 98.9 5.1E-10 1.8E-14 83.3 4.1 62 64-130 4-66 (80)
183 2r2j_A Thioredoxin domain-cont 98.9 2.5E-08 8.4E-13 97.4 15.9 191 44-250 119-327 (382)
184 3drn_A Peroxiredoxin, bacterio 98.9 1.2E-08 4E-13 86.8 11.5 94 34-135 9-130 (161)
185 2ls5_A Uncharacterized protein 98.4 1.8E-10 6.1E-15 97.8 0.0 88 59-148 32-146 (159)
186 1ego_A Glutaredoxin; electron 98.9 4.9E-09 1.7E-13 78.7 8.0 75 64-149 3-83 (85)
187 2k6v_A Putative cytochrome C o 98.9 2.3E-09 7.9E-14 92.0 6.9 90 59-148 34-171 (172)
188 2ggt_A SCO1 protein homolog, m 98.9 1.2E-08 4.3E-13 86.6 10.8 91 59-149 22-160 (164)
189 2rli_A SCO2 protein homolog, m 98.9 1.2E-08 4E-13 87.5 10.7 92 59-150 25-164 (171)
190 1xvw_A Hypothetical protein RV 98.8 3.1E-08 1.1E-12 83.9 11.3 87 59-147 35-157 (160)
191 1we0_A Alkyl hydroperoxide red 98.8 2.8E-08 9.5E-13 86.7 10.7 89 59-149 30-156 (187)
192 2p31_A CL683, glutathione pero 98.8 2.9E-08 9.9E-13 86.1 10.7 107 34-149 30-180 (181)
193 2p5q_A Glutathione peroxidase 98.8 3.2E-08 1.1E-12 84.6 10.7 108 34-150 13-168 (170)
194 2vup_A Glutathione peroxidase- 98.8 3.7E-08 1.3E-12 86.2 11.2 90 59-150 47-185 (190)
195 3dwv_A Glutathione peroxidase- 98.8 2.4E-08 8.2E-13 87.2 9.6 91 59-151 45-184 (187)
196 3cmi_A Peroxiredoxin HYR1; thi 98.7 2.2E-08 7.7E-13 85.9 8.7 89 59-150 31-168 (171)
197 1zof_A Alkyl hydroperoxide-red 98.7 2.7E-08 9.4E-13 87.6 9.2 89 59-149 32-160 (198)
198 2v1m_A Glutathione peroxidase; 98.7 7.3E-08 2.5E-12 82.2 11.3 107 34-149 12-166 (169)
199 2bmx_A Alkyl hydroperoxidase C 98.7 3.9E-08 1.3E-12 86.4 9.7 90 59-150 44-170 (195)
200 2obi_A PHGPX, GPX-4, phospholi 98.7 6.4E-08 2.2E-12 84.1 10.4 88 59-148 46-182 (183)
201 1eej_A Thiol:disulfide interch 98.7 3.4E-08 1.2E-12 88.3 8.0 81 59-148 85-209 (216)
202 3q6o_A Sulfhydryl oxidase 1; p 98.7 1.7E-06 5.7E-11 78.8 19.1 194 151-365 12-238 (244)
203 2f8a_A Glutathione peroxidase 98.7 1.3E-07 4.4E-12 83.9 10.8 64 32-104 25-89 (208)
204 3gyk_A 27KDA outer membrane pr 98.6 1.1E-07 3.8E-12 81.8 9.6 83 59-149 21-172 (175)
205 2gs3_A PHGPX, GPX-4, phospholi 98.6 1.5E-07 5E-12 81.9 10.5 106 34-148 30-184 (185)
206 1qmv_A Human thioredoxin perox 98.6 1.6E-07 5.4E-12 82.6 10.6 89 59-149 33-162 (197)
207 2l4c_A Endoplasmic reticulum r 98.6 3.8E-07 1.3E-11 73.5 11.8 95 43-148 21-122 (124)
208 3kij_A Probable glutathione pe 98.6 1.6E-07 5.6E-12 81.2 10.3 107 34-149 19-169 (180)
209 1t3b_A Thiol:disulfide interch 98.6 7E-08 2.4E-12 85.9 7.4 81 59-148 85-209 (211)
210 1zye_A Thioredoxin-dependent p 98.6 3.3E-07 1.1E-11 82.1 10.6 88 60-149 56-184 (220)
211 1uul_A Tryparedoxin peroxidase 98.5 3.9E-07 1.3E-11 80.4 10.7 88 60-149 36-164 (202)
212 2h01_A 2-Cys peroxiredoxin; th 98.5 3.2E-07 1.1E-11 80.3 9.6 89 59-149 30-158 (192)
213 2l4c_A Endoplasmic reticulum r 98.5 1.1E-07 3.6E-12 76.8 5.8 101 145-252 13-124 (124)
214 1xzo_A BSSCO, hypothetical pro 98.5 7.1E-07 2.4E-11 76.4 11.1 92 59-150 32-172 (174)
215 1h75_A Glutaredoxin-like prote 98.5 9.4E-08 3.2E-12 70.9 4.7 70 64-147 3-75 (81)
216 1r7h_A NRDH-redoxin; thioredox 98.5 4.5E-07 1.6E-11 65.9 8.1 68 64-145 3-73 (75)
217 2b7k_A SCO1 protein; metalloch 98.5 4.2E-07 1.4E-11 80.1 9.0 92 59-150 40-179 (200)
218 3t58_A Sulfhydryl oxidase 1; o 98.4 1.3E-05 4.3E-10 80.9 19.7 177 152-343 13-221 (519)
219 2i81_A 2-Cys peroxiredoxin; st 98.4 1.1E-06 3.7E-11 78.2 10.7 89 59-149 51-179 (213)
220 2jsy_A Probable thiol peroxida 98.4 2.7E-06 9.3E-11 72.3 12.0 87 59-149 43-166 (167)
221 1v58_A Thiol:disulfide interch 98.4 1.1E-06 3.8E-11 79.8 9.8 85 60-149 97-232 (241)
222 3ztl_A Thioredoxin peroxidase; 98.4 1.9E-06 6.5E-11 77.2 11.0 87 59-147 68-195 (222)
223 2a4v_A Peroxiredoxin DOT5; yea 98.4 3.3E-06 1.1E-10 71.2 11.8 80 55-138 30-139 (159)
224 1kte_A Thioltransferase; redox 98.4 5E-07 1.7E-11 70.6 6.2 70 51-130 3-79 (105)
225 3gkn_A Bacterioferritin comigr 98.4 3.9E-06 1.3E-10 71.0 11.9 102 38-148 20-160 (163)
226 3h93_A Thiol:disulfide interch 98.3 2E-06 6.9E-11 75.1 8.2 86 59-149 24-183 (192)
227 1xvq_A Thiol peroxidase; thior 98.2 4.9E-06 1.7E-10 71.4 9.8 68 59-131 43-143 (175)
228 2hze_A Glutaredoxin-1; thiored 98.2 1.1E-06 3.9E-11 69.8 4.7 70 51-130 10-86 (114)
229 3hd5_A Thiol:disulfide interch 98.2 3.8E-06 1.3E-10 73.5 8.6 43 59-104 24-66 (195)
230 3me7_A Putative uncharacterize 98.2 1.9E-05 6.6E-10 67.3 12.5 108 37-151 12-163 (170)
231 2cq9_A GLRX2 protein, glutared 98.2 2.4E-06 8.1E-11 69.6 6.4 68 50-130 17-91 (130)
232 3tco_A Thioredoxin (TRXA-1); d 98.2 2.3E-05 7.8E-10 60.9 11.7 104 253-366 4-108 (109)
233 2ht9_A Glutaredoxin-2; thiored 98.2 2.9E-06 9.9E-11 70.5 6.6 68 50-130 39-113 (146)
234 1nm3_A Protein HI0572; hybrid, 98.2 5.3E-05 1.8E-09 68.5 15.6 74 59-134 32-142 (241)
235 3gnj_A Thioredoxin domain prot 98.1 3.1E-05 1E-09 60.5 12.0 104 254-367 5-110 (111)
236 2i3y_A Epididymal secretory gl 98.1 4.5E-05 1.5E-09 67.7 14.0 89 59-150 55-211 (215)
237 2e0q_A Thioredoxin; electron t 98.1 2.4E-05 8.4E-10 60.1 10.8 102 256-367 2-103 (104)
238 2yan_A Glutaredoxin-3; oxidore 98.1 4.9E-06 1.7E-10 64.9 6.6 67 51-130 8-83 (105)
239 3qfa_C Thioredoxin; protein-pr 98.1 3.4E-05 1.2E-09 61.1 11.6 104 252-366 11-116 (116)
240 3a2v_A Probable peroxiredoxin; 98.1 8.6E-06 2.9E-10 73.9 8.7 93 54-148 27-160 (249)
241 2c0d_A Thioredoxin peroxidase 98.1 1.8E-05 6E-10 70.7 10.4 89 59-149 55-183 (221)
242 4g2e_A Peroxiredoxin; redox pr 98.1 6.5E-06 2.2E-10 69.3 7.0 108 32-148 9-156 (157)
243 4gqc_A Thiol peroxidase, perox 98.0 3E-06 1E-10 72.1 4.5 111 32-149 10-159 (164)
244 3ic4_A Glutaredoxin (GRX-1); s 98.0 6.7E-06 2.3E-10 62.3 5.9 69 64-146 14-91 (92)
245 3c1r_A Glutaredoxin-1; oxidize 98.0 3.2E-06 1.1E-10 67.5 4.2 70 51-130 16-93 (118)
246 3die_A Thioredoxin, TRX; elect 98.0 4.4E-05 1.5E-09 59.0 10.8 101 254-365 4-105 (106)
247 3bj5_A Protein disulfide-isome 98.0 7.8E-05 2.7E-09 61.8 12.7 109 43-154 14-131 (147)
248 1syr_A Thioredoxin; SGPP, stru 98.0 3.8E-05 1.3E-09 60.3 10.1 104 252-366 8-111 (112)
249 3hxs_A Thioredoxin, TRXP; elec 98.0 6.3E-05 2.2E-09 61.7 11.6 105 253-367 22-139 (141)
250 1v98_A Thioredoxin; oxidoreduc 98.0 5.3E-05 1.8E-09 62.1 10.9 107 253-369 33-140 (140)
251 2pn8_A Peroxiredoxin-4; thiore 98.0 4.1E-05 1.4E-09 67.8 10.8 89 59-149 47-176 (211)
252 1thx_A Thioredoxin, thioredoxi 98.0 8.5E-05 2.9E-09 58.3 11.7 106 253-368 7-114 (115)
253 2klx_A Glutaredoxin; thioredox 98.0 5.6E-06 1.9E-10 62.3 4.5 56 64-130 8-66 (89)
254 3p2a_A Thioredoxin 2, putative 98.0 0.00011 3.7E-09 60.9 12.8 105 254-368 39-144 (148)
255 3hz4_A Thioredoxin; NYSGXRC, P 98.0 2.2E-05 7.6E-10 64.5 8.4 110 253-372 6-117 (140)
256 2yzu_A Thioredoxin; redox prot 98.0 4.3E-05 1.5E-09 59.3 9.6 103 255-367 3-106 (109)
257 3ixr_A Bacterioferritin comigr 98.0 5.7E-05 1.9E-09 65.0 11.2 88 59-148 50-176 (179)
258 2r37_A Glutathione peroxidase 98.0 0.0001 3.5E-09 65.0 13.0 61 34-104 18-79 (207)
259 1nsw_A Thioredoxin, TRX; therm 98.0 4.7E-05 1.6E-09 58.8 9.7 102 255-366 2-104 (105)
260 3m9j_A Thioredoxin; oxidoreduc 97.9 8.5E-05 2.9E-09 57.2 10.8 97 259-366 7-105 (105)
261 1r26_A Thioredoxin; redox-acti 97.9 6.6E-05 2.3E-09 60.4 10.5 103 255-368 21-124 (125)
262 2vlu_A Thioredoxin, thioredoxi 97.9 9.3E-05 3.2E-09 58.9 11.4 106 252-368 12-121 (122)
263 3f3q_A Thioredoxin-1; His TAG, 97.9 0.00015 5.3E-09 56.5 12.3 99 256-365 10-108 (109)
264 3rhb_A ATGRXC5, glutaredoxin-C 97.9 1.2E-05 4.2E-10 63.5 5.6 68 51-131 10-85 (113)
265 1fb6_A Thioredoxin M; electron 97.9 0.00015 5.1E-09 55.8 11.8 102 255-366 2-105 (105)
266 1dby_A Chloroplast thioredoxin 97.9 0.00011 3.9E-09 56.7 11.1 102 255-366 3-106 (107)
267 3aps_A DNAJ homolog subfamily 97.9 0.0001 3.5E-09 58.6 11.1 109 254-368 4-114 (122)
268 2ppt_A Thioredoxin-2; thiredox 97.9 7.9E-05 2.7E-09 62.5 10.8 104 255-368 49-153 (155)
269 1n8j_A AHPC, alkyl hydroperoxi 97.9 7.3E-05 2.5E-09 64.7 10.8 88 60-149 30-155 (186)
270 2vim_A Thioredoxin, TRX; thior 97.9 0.00013 4.4E-09 56.1 11.1 95 261-366 8-104 (104)
271 1w4v_A Thioredoxin, mitochondr 97.9 0.00019 6.3E-09 57.0 12.2 105 252-366 12-118 (119)
272 2l5l_A Thioredoxin; structural 97.9 0.00016 5.5E-09 58.9 12.1 105 255-369 11-128 (136)
273 4hde_A SCO1/SENC family lipopr 97.9 0.0002 6.9E-09 60.9 13.1 110 33-149 12-169 (170)
274 2trx_A Thioredoxin; electron t 97.9 0.00016 5.6E-09 55.9 11.7 102 255-366 4-107 (108)
275 3gv1_A Disulfide interchange p 97.9 1.8E-05 6.3E-10 65.6 6.2 81 59-150 13-139 (147)
276 1fov_A Glutaredoxin 3, GRX3; a 97.9 4.2E-05 1.4E-09 56.3 7.6 67 64-146 3-73 (82)
277 3h79_A Thioredoxin-like protei 97.9 0.00022 7.7E-09 57.2 12.6 103 253-365 15-126 (127)
278 1tp9_A Peroxiredoxin, PRX D (t 97.9 5.7E-05 2E-09 63.8 9.2 71 59-131 34-141 (162)
279 2dml_A Protein disulfide-isome 97.9 8.7E-05 3E-09 59.8 9.9 104 254-367 18-124 (130)
280 2znm_A Thiol:disulfide interch 97.8 3.9E-05 1.4E-09 66.9 8.2 42 59-103 21-62 (195)
281 1un2_A DSBA, thiol-disulfide i 97.8 5E-06 1.7E-10 72.8 2.3 44 60-106 113-159 (197)
282 3qpm_A Peroxiredoxin; oxidored 97.8 0.00011 3.8E-09 66.4 11.3 88 59-148 76-204 (240)
283 4euy_A Uncharacterized protein 97.8 4.4E-05 1.5E-09 59.2 7.5 98 259-366 7-104 (105)
284 3uvt_A Thioredoxin domain-cont 97.8 0.00019 6.5E-09 55.8 11.1 100 254-364 6-109 (111)
285 1psq_A Probable thiol peroxida 97.8 0.00016 5.3E-09 61.0 11.2 85 59-147 41-162 (163)
286 3qmx_A Glutaredoxin A, glutare 97.8 3.1E-05 1.1E-09 59.6 6.0 60 60-130 14-78 (99)
287 1z6m_A Conserved hypothetical 97.8 0.00011 3.7E-09 62.8 10.2 82 60-146 27-174 (175)
288 2i4a_A Thioredoxin; acidophIle 97.8 0.00016 5.4E-09 55.9 10.1 101 255-365 4-106 (107)
289 2yzh_A Probable thiol peroxida 97.8 0.00014 4.8E-09 61.8 10.6 85 59-148 46-170 (171)
290 1t00_A Thioredoxin, TRX; redox 97.8 0.00021 7.2E-09 55.8 10.8 104 254-367 6-111 (112)
291 1x5d_A Protein disulfide-isome 97.8 0.0001 3.5E-09 59.6 9.1 108 253-370 7-120 (133)
292 2i1u_A Thioredoxin, TRX, MPT46 97.8 0.00016 5.6E-09 57.3 10.2 106 252-367 11-118 (121)
293 2pu9_C TRX-F, thioredoxin F-ty 97.8 0.00029 9.8E-09 55.0 11.4 103 253-366 5-110 (111)
294 3nzn_A Glutaredoxin; structura 97.8 6.1E-05 2.1E-09 58.4 7.2 72 61-145 21-101 (103)
295 2dj1_A Protein disulfide-isome 97.8 0.00016 5.6E-09 59.0 10.2 108 254-372 18-129 (140)
296 1gh2_A Thioredoxin-like protei 97.8 0.00052 1.8E-08 53.1 12.6 98 258-366 7-106 (107)
297 3apq_A DNAJ homolog subfamily 97.8 0.00035 1.2E-08 61.6 13.0 110 253-372 97-207 (210)
298 3msz_A Glutaredoxin 1; alpha-b 97.7 0.00012 4.2E-09 54.6 8.5 74 63-150 5-87 (89)
299 3zzx_A Thioredoxin; oxidoreduc 97.7 0.0005 1.7E-08 53.3 12.1 96 259-365 7-104 (105)
300 1ti3_A Thioredoxin H, PTTRXH1; 97.7 0.00025 8.7E-09 55.3 10.6 98 259-367 11-112 (113)
301 1xwb_A Thioredoxin; dimerizati 97.7 0.00027 9.2E-09 54.4 10.5 98 257-365 4-105 (106)
302 2wfc_A Peroxiredoxin 5, PRDX5; 97.7 0.00012 4.1E-09 62.2 9.0 44 59-104 30-76 (167)
303 3p7x_A Probable thiol peroxida 97.7 0.00016 5.4E-09 61.2 9.7 99 37-147 30-165 (166)
304 1ep7_A Thioredoxin CH1, H-type 97.7 0.0003 1E-08 54.8 10.7 98 259-367 9-111 (112)
305 2qsi_A Putative hydrogenase ex 97.7 0.00025 8.7E-09 57.5 10.2 109 246-367 11-123 (137)
306 2voc_A Thioredoxin; electron t 97.7 0.00012 4.1E-09 57.4 8.1 103 255-368 3-106 (112)
307 2khp_A Glutaredoxin; thioredox 97.7 4.7E-05 1.6E-09 57.5 5.5 56 64-130 8-67 (92)
308 2o8v_B Thioredoxin 1; disulfid 97.7 0.00021 7.3E-09 57.6 9.8 102 255-366 24-127 (128)
309 2l6c_A Thioredoxin; oxidoreduc 97.7 0.00021 7.3E-09 55.8 9.3 102 256-368 6-107 (110)
310 3dxb_A Thioredoxin N-terminall 97.7 0.00029 1E-08 62.7 11.3 110 253-372 12-123 (222)
311 3tjj_A Peroxiredoxin-4; thiore 97.7 0.00016 5.5E-09 65.8 9.5 88 59-148 90-218 (254)
312 1faa_A Thioredoxin F; electron 97.7 0.00046 1.6E-08 55.0 11.2 104 252-366 17-123 (124)
313 3d6i_A Monothiol glutaredoxin- 97.7 0.00042 1.5E-08 54.0 10.7 101 256-367 3-109 (112)
314 2wz9_A Glutaredoxin-3; protein 97.7 0.00061 2.1E-08 56.7 12.3 107 254-371 13-122 (153)
315 2lqo_A Putative glutaredoxin R 97.6 0.00011 3.7E-09 55.5 6.7 75 63-150 5-84 (92)
316 3h8q_A Thioredoxin reductase 3 97.6 6.2E-05 2.1E-09 59.5 5.6 68 50-130 7-81 (114)
317 3uma_A Hypothetical peroxiredo 97.6 0.00016 5.6E-09 62.3 8.7 77 53-131 50-162 (184)
318 2j23_A Thioredoxin; immune pro 97.6 0.00024 8.1E-09 56.6 9.0 97 259-366 22-120 (121)
319 3ga4_A Dolichyl-diphosphooligo 97.6 0.00055 1.9E-08 58.3 11.7 122 243-367 8-153 (178)
320 2xc2_A Thioredoxinn; oxidoredu 97.6 0.00049 1.7E-08 54.2 10.8 99 255-365 15-116 (117)
321 2l57_A Uncharacterized protein 97.6 0.00076 2.6E-08 53.9 12.0 104 256-369 7-119 (126)
322 2oe3_A Thioredoxin-3; electron 97.6 0.00033 1.1E-08 55.2 9.3 95 259-364 19-113 (114)
323 2vm1_A Thioredoxin, thioredoxi 97.6 0.00058 2E-08 53.7 10.8 99 259-368 13-115 (118)
324 4dvc_A Thiol:disulfide interch 97.6 0.00019 6.6E-09 61.6 8.4 86 60-150 21-182 (184)
325 1prx_A HORF6; peroxiredoxin, h 97.6 0.00073 2.5E-08 60.3 12.3 86 62-149 34-168 (224)
326 1mek_A Protein disulfide isome 97.6 9.9E-05 3.4E-09 58.3 5.9 103 255-367 9-117 (120)
327 2pwj_A Mitochondrial peroxired 97.6 7.8E-05 2.7E-09 63.6 5.6 65 53-119 37-107 (171)
328 2rem_A Disulfide oxidoreductas 97.6 0.00042 1.4E-08 60.1 10.5 41 60-103 25-65 (193)
329 1x5e_A Thioredoxin domain cont 97.6 0.00038 1.3E-08 55.7 9.4 107 253-372 7-115 (126)
330 3evi_A Phosducin-like protein 97.6 0.0012 4.2E-08 52.2 12.1 106 252-364 2-111 (118)
331 1xfl_A Thioredoxin H1; AT3G510 97.5 0.00072 2.5E-08 54.0 10.7 97 259-366 23-123 (124)
332 2ec4_A FAS-associated factor 1 97.5 0.00092 3.1E-08 57.1 11.7 88 58-148 53-166 (178)
333 3ul3_B Thioredoxin, thioredoxi 97.5 0.00036 1.2E-08 56.1 8.5 103 252-364 24-127 (128)
334 2dj3_A Protein disulfide-isome 97.5 0.00032 1.1E-08 56.7 8.0 111 252-371 6-122 (133)
335 3d22_A TRXH4, thioredoxin H-ty 97.5 0.00076 2.6E-08 54.9 10.2 102 257-369 29-134 (139)
336 2qgv_A Hydrogenase-1 operon pr 97.5 0.00031 1.1E-08 57.2 7.6 106 254-368 18-126 (140)
337 3ctg_A Glutaredoxin-2; reduced 97.5 0.00022 7.4E-09 57.7 6.6 71 50-130 27-105 (129)
338 1wik_A Thioredoxin-like protei 97.5 0.00016 5.4E-09 56.6 5.5 68 50-130 5-81 (109)
339 2es7_A Q8ZP25_salty, putative 97.5 0.00023 7.9E-09 58.6 6.8 107 254-369 18-127 (142)
340 1q98_A Thiol peroxidase, TPX; 97.5 0.00039 1.3E-08 58.7 8.4 57 59-119 42-102 (165)
341 2f51_A Thioredoxin; electron t 97.4 0.002 6.9E-08 50.8 11.6 102 254-366 4-112 (118)
342 2dbc_A PDCL2, unnamed protein 97.4 0.0042 1.4E-07 50.3 13.6 117 251-376 8-128 (135)
343 2v2g_A Peroxiredoxin 6; oxidor 97.4 0.00096 3.3E-08 59.8 10.6 88 59-148 28-163 (233)
344 3zrd_A Thiol peroxidase; oxido 97.3 0.00053 1.8E-08 60.0 8.0 57 59-119 77-137 (200)
345 3emx_A Thioredoxin; structural 97.3 0.0016 5.5E-08 52.8 10.0 102 255-369 18-128 (135)
346 1xcc_A 1-Cys peroxiredoxin; un 97.3 0.0011 3.8E-08 58.8 9.3 85 62-148 34-164 (220)
347 2qc7_A ERP31, ERP28, endoplasm 97.2 0.0013 4.6E-08 59.0 9.8 103 253-366 5-118 (240)
348 3mng_A Peroxiredoxin-5, mitoch 97.2 0.00051 1.8E-08 58.6 6.6 55 60-116 43-103 (173)
349 2c0g_A ERP29 homolog, windbeut 97.2 0.0022 7.4E-08 57.9 10.6 105 253-367 16-132 (248)
350 2djj_A PDI, protein disulfide- 97.2 0.0013 4.3E-08 52.0 8.0 104 253-369 7-119 (121)
351 2av4_A Thioredoxin-like protei 97.2 0.0023 7.8E-08 52.9 9.5 107 259-369 28-141 (160)
352 3qou_A Protein YBBN; thioredox 97.2 0.0013 4.5E-08 60.8 9.2 107 252-368 6-115 (287)
353 3gix_A Thioredoxin-like protei 97.1 0.003 1E-07 52.3 10.0 108 258-369 9-123 (149)
354 1oaz_A Thioredoxin 1; immune s 97.1 0.00036 1.2E-08 55.8 4.0 102 255-366 5-122 (123)
355 3hz8_A Thiol:disulfide interch 97.1 0.00074 2.5E-08 58.7 6.3 45 59-106 23-67 (193)
356 1wou_A Thioredoxin -related pr 97.0 0.0034 1.1E-07 49.9 8.8 101 254-364 6-122 (123)
357 2fwh_A Thiol:disulfide interch 96.9 0.0092 3.1E-07 48.1 11.3 99 257-365 16-126 (134)
358 3iv4_A Putative oxidoreductase 96.9 0.0056 1.9E-07 47.5 9.1 94 259-362 13-111 (112)
359 1zma_A Bacterocin transport ac 96.9 0.0039 1.3E-07 48.9 8.6 102 252-363 11-117 (118)
360 1a0r_P Phosducin, MEKA, PP33; 96.9 0.0038 1.3E-07 56.2 9.3 109 252-365 111-224 (245)
361 2yj7_A LPBCA thioredoxin; oxid 95.9 0.00016 5.5E-09 55.5 0.0 100 256-365 4-105 (106)
362 3fk8_A Disulphide isomerase; A 96.9 0.0064 2.2E-07 48.8 9.6 98 268-366 27-132 (133)
363 1qgv_A Spliceosomal protein U5 96.8 0.0098 3.3E-07 48.6 10.8 107 259-369 10-123 (142)
364 2trc_P Phosducin, MEKA, PP33; 96.8 0.0034 1.2E-07 55.5 8.4 109 252-365 98-211 (217)
365 1wmj_A Thioredoxin H-type; str 96.8 0.00058 2E-08 54.8 2.6 100 259-369 21-124 (130)
366 3gha_A Disulfide bond formatio 96.8 0.0078 2.7E-07 52.5 10.1 87 59-150 28-192 (202)
367 3sbc_A Peroxiredoxin TSA1; alp 96.6 0.02 7E-07 50.2 11.8 87 60-148 52-179 (216)
368 3keb_A Probable thiol peroxida 96.6 0.012 4E-07 52.1 10.3 83 60-149 48-175 (224)
369 3l9v_A Putative thiol-disulfid 96.6 0.00088 3E-08 58.0 2.8 42 61-105 15-59 (189)
370 3l4n_A Monothiol glutaredoxin- 96.5 0.0029 9.8E-08 50.8 5.2 70 51-130 5-81 (127)
371 1lu4_A Soluble secreted antige 96.5 0.024 8.2E-07 45.2 10.7 91 269-366 23-135 (136)
372 3feu_A Putative lipoprotein; a 96.5 0.0015 5.2E-08 56.2 3.5 40 60-104 22-61 (185)
373 1fo5_A Thioredoxin; disulfide 96.3 0.0086 2.9E-07 43.6 6.4 80 272-365 4-84 (85)
374 2dj0_A Thioredoxin-related tra 96.3 0.007 2.4E-07 49.0 6.5 88 254-345 8-105 (137)
375 2kuc_A Putative disulphide-iso 96.3 0.012 4.3E-07 46.8 7.9 91 269-369 26-123 (130)
376 3cxg_A Putative thioredoxin; m 96.3 0.013 4.4E-07 47.2 7.6 97 260-368 28-130 (133)
377 4f82_A Thioredoxin reductase; 96.2 0.011 3.6E-07 50.3 7.2 51 52-104 40-92 (176)
378 1zzo_A RV1677; thioredoxin fol 96.2 0.043 1.5E-06 43.5 10.7 89 269-367 24-135 (136)
379 1nho_A Probable thioredoxin; b 96.1 0.011 3.6E-07 43.1 5.9 67 287-366 17-84 (85)
380 2b5x_A YKUV protein, TRXY; thi 96.1 0.057 2E-06 43.6 11.0 90 269-368 28-146 (148)
381 2wci_A Glutaredoxin-4; redox-a 96.1 0.0046 1.6E-07 50.1 4.0 68 50-130 25-101 (135)
382 1nm3_A Protein HI0572; hybrid, 95.8 0.024 8.1E-07 50.8 8.2 59 61-130 169-230 (241)
383 3qcp_A QSOX from trypanosoma b 95.8 0.037 1.3E-06 54.5 10.0 113 254-370 24-155 (470)
384 3or5_A Thiol:disulfide interch 95.6 0.092 3.2E-06 43.3 10.6 93 269-371 33-155 (165)
385 3f4s_A Alpha-DSBA1, putative u 95.6 0.035 1.2E-06 49.3 8.3 42 60-102 39-81 (226)
386 3raz_A Thioredoxin-related pro 95.6 0.2 6.9E-06 40.7 12.3 96 269-372 23-145 (151)
387 1aba_A Glutaredoxin; electron 95.6 0.015 5.1E-07 43.0 4.7 57 64-130 2-76 (87)
388 2lja_A Putative thiol-disulfid 95.5 0.08 2.7E-06 43.1 9.4 93 270-371 30-147 (152)
389 3ipz_A Monothiol glutaredoxin- 95.5 0.015 5.1E-07 45.1 4.5 67 51-130 9-84 (109)
390 3ha9_A Uncharacterized thiored 95.4 0.12 4.3E-06 42.7 10.6 89 269-368 36-165 (165)
391 1hyu_A AHPF, alkyl hydroperoxi 95.4 0.18 6E-06 50.7 13.5 135 217-364 61-197 (521)
392 3erw_A Sporulation thiol-disul 95.4 0.095 3.2E-06 42.0 9.5 84 269-362 33-144 (145)
393 3gx8_A Monothiol glutaredoxin- 95.4 0.027 9.2E-07 44.6 5.9 66 52-130 8-85 (121)
394 1t1v_A SH3BGRL3, SH3 domain-bi 95.3 0.027 9.1E-07 42.2 5.5 56 64-130 4-71 (93)
395 4eo3_A Bacterioferritin comigr 95.3 0.14 4.8E-06 48.0 11.5 103 34-149 5-138 (322)
396 2ju5_A Thioredoxin disulfide i 95.3 0.098 3.3E-06 43.1 9.3 92 269-368 46-153 (154)
397 3ia1_A THIO-disulfide isomeras 95.3 0.12 4E-06 42.2 9.8 89 271-370 31-147 (154)
398 2ct6_A SH3 domain-binding glut 95.2 0.026 8.8E-07 43.9 5.3 57 63-130 9-83 (111)
399 3zyw_A Glutaredoxin-3; metal b 95.2 0.015 5.3E-07 45.2 4.0 67 51-130 7-82 (111)
400 3tue_A Tryparedoxin peroxidase 95.2 0.16 5.4E-06 44.6 10.9 87 60-148 56-183 (219)
401 2f9s_A Thiol-disulfide oxidore 95.2 0.11 3.9E-06 42.1 9.5 94 269-372 25-143 (151)
402 2l5o_A Putative thioredoxin; s 95.1 0.16 5.5E-06 41.2 10.1 94 269-372 27-146 (153)
403 1z6n_A Hypothetical protein PA 95.0 0.17 5.8E-06 42.4 10.2 82 257-338 40-121 (167)
404 2wem_A Glutaredoxin-related pr 94.9 0.033 1.1E-06 43.9 5.1 67 51-130 11-87 (118)
405 2axo_A Hypothetical protein AT 94.8 0.045 1.5E-06 49.5 6.2 79 61-148 43-141 (270)
406 3gl3_A Putative thiol:disulfid 94.7 0.28 9.4E-06 39.7 10.7 95 269-371 27-146 (152)
407 2lrn_A Thiol:disulfide interch 94.5 0.33 1.1E-05 39.4 10.6 91 269-371 28-145 (152)
408 3l9s_A Thiol:disulfide interch 94.4 0.023 7.8E-07 49.0 3.2 40 61-103 22-64 (191)
409 3ira_A Conserved protein; meth 94.4 0.25 8.7E-06 41.6 9.6 89 246-338 13-115 (173)
410 3fkf_A Thiol-disulfide oxidore 94.1 0.36 1.2E-05 38.7 10.0 87 269-367 32-146 (148)
411 3kcm_A Thioredoxin family prot 93.8 0.49 1.7E-05 38.3 10.3 93 269-369 27-145 (154)
412 2lst_A Thioredoxin; structural 92.6 0.013 4.5E-07 46.7 0.0 97 263-369 12-118 (130)
413 4evm_A Thioredoxin family prot 93.4 0.55 1.9E-05 36.7 9.7 87 269-365 21-137 (138)
414 1sen_A Thioredoxin-like protei 93.4 0.15 5.1E-06 42.5 6.3 105 262-368 38-149 (164)
415 3lor_A Thiol-disulfide isomera 93.4 0.7 2.4E-05 37.6 10.6 90 270-369 30-157 (160)
416 1xiy_A Peroxiredoxin, pfaop; a 93.3 0.15 5.3E-06 43.3 6.3 55 60-116 43-104 (182)
417 2cvb_A Probable thiol-disulfid 92.9 0.62 2.1E-05 39.3 9.7 95 271-370 34-162 (188)
418 2h30_A Thioredoxin, peptide me 92.7 0.2 7E-06 41.2 6.2 103 255-367 23-156 (164)
419 1kng_A Thiol:disulfide interch 92.6 0.62 2.1E-05 37.7 9.1 87 270-367 42-152 (156)
420 3eyt_A Uncharacterized protein 92.5 0.96 3.3E-05 36.7 10.2 90 270-369 28-154 (158)
421 3hdc_A Thioredoxin family prot 92.3 1.4 4.9E-05 35.8 11.1 74 269-346 40-135 (158)
422 2ywi_A Hypothetical conserved 91.7 1.2 4E-05 37.8 10.2 94 273-370 49-177 (196)
423 1jfu_A Thiol:disulfide interch 91.5 1.8 6.2E-05 36.2 11.0 95 270-369 60-182 (186)
424 3u5r_E Uncharacterized protein 91.4 0.96 3.3E-05 39.4 9.4 55 314-372 133-192 (218)
425 3lwa_A Secreted thiol-disulfid 91.4 1.1 3.9E-05 37.4 9.6 92 269-367 58-181 (183)
426 2b1k_A Thiol:disulfide interch 91.3 1.1 3.7E-05 36.9 9.2 87 269-367 50-160 (168)
427 3c7m_A Thiol:disulfide interch 91.3 0.29 9.8E-06 41.7 5.7 41 60-103 17-58 (195)
428 3hcz_A Possible thiol-disulfid 91.2 0.54 1.9E-05 37.6 7.1 67 269-339 30-123 (148)
429 3fw2_A Thiol-disulfide oxidore 91.1 1.9 6.5E-05 34.6 10.4 85 270-366 33-147 (150)
430 1u6t_A SH3 domain-binding glut 90.8 0.61 2.1E-05 36.5 6.6 62 64-130 2-75 (121)
431 2wul_A Glutaredoxin related pr 90.8 0.27 9.2E-06 38.5 4.5 68 50-130 10-87 (118)
432 3f9u_A Putative exported cytoc 90.6 0.92 3.2E-05 37.6 8.2 88 268-367 45-166 (172)
433 3kh7_A Thiol:disulfide interch 89.3 2.5 8.7E-05 35.1 9.9 86 270-367 58-167 (176)
434 2in3_A Hypothetical protein; D 89.3 0.47 1.6E-05 41.2 5.4 45 105-149 164-209 (216)
435 2jad_A Yellow fluorescent prot 88.3 0.19 6.4E-06 47.5 2.1 71 52-130 253-329 (362)
436 1t4y_A Adaptive-response senso 88.1 6.6 0.00023 29.5 10.0 84 64-148 14-97 (105)
437 1o8x_A Tryparedoxin, TRYX, TXN 87.9 3 0.0001 33.1 9.2 67 269-339 27-121 (146)
438 2kok_A Arsenate reductase; bru 87.8 2.1 7.1E-05 33.4 7.8 43 64-115 7-56 (120)
439 2fgx_A Putative thioredoxin; N 87.6 2.5 8.7E-05 32.2 7.9 75 274-362 32-106 (107)
440 1i5g_A Tryparedoxin II; electr 87.6 3.2 0.00011 32.9 9.1 68 269-340 27-122 (144)
441 1o73_A Tryparedoxin; electron 87.5 3.1 0.00011 32.8 9.0 67 269-339 27-121 (144)
442 3tdg_A DSBG, putative uncharac 87.2 0.47 1.6E-05 42.9 4.0 28 60-87 147-174 (273)
443 2x8g_A Thioredoxin glutathione 86.9 0.73 2.5E-05 47.0 5.8 67 51-130 9-82 (598)
444 3s9f_A Tryparedoxin; thioredox 86.8 3.4 0.00012 33.9 9.0 68 269-340 47-142 (165)
445 2xhf_A Peroxiredoxin 5; oxidor 86.7 0.68 2.3E-05 38.8 4.5 54 60-115 42-100 (171)
446 1ilo_A Conserved hypothetical 85.6 2.9 9.9E-05 28.9 7.0 52 275-333 4-56 (77)
447 2lrt_A Uncharacterized protein 85.2 5.5 0.00019 32.0 9.4 87 270-369 35-147 (152)
448 3kp8_A Vkorc1/thioredoxin doma 85.1 1 3.5E-05 34.3 4.5 71 272-362 14-90 (106)
449 3gn3_A Putative protein-disulf 85.0 1.5 5.1E-05 37.1 5.9 43 59-103 13-55 (182)
450 3bci_A Disulfide bond protein 83.6 2.2 7.4E-05 35.9 6.4 43 60-103 11-54 (186)
451 1ttz_A Conserved hypothetical 83.2 2.9 9.8E-05 30.5 6.0 72 280-369 8-79 (87)
452 2hyx_A Protein DIPZ; thioredox 83.1 4.9 0.00017 37.9 9.2 89 270-368 82-200 (352)
453 1ego_A Glutaredoxin; electron 82.5 3 0.0001 29.5 6.0 55 278-333 6-64 (85)
454 3ewl_A Uncharacterized conserv 81.7 6.2 0.00021 30.9 8.3 37 319-366 104-140 (142)
455 3dml_A Putative uncharacterize 81.7 1.6 5.3E-05 33.9 4.3 43 207-250 66-108 (116)
456 3kzq_A Putative uncharacterize 81.2 1.6 5.4E-05 37.6 4.7 44 106-149 158-202 (208)
457 2lus_A Thioredoxion; CR-Trp16, 81.8 0.32 1.1E-05 38.8 0.0 24 314-340 98-121 (143)
458 4fo5_A Thioredoxin-like protei 80.6 8 0.00027 30.4 8.5 82 270-363 32-141 (143)
459 3bci_A Disulfide bond protein 80.5 1.4 4.9E-05 37.1 4.1 40 106-149 138-177 (186)
460 3gmf_A Protein-disulfide isome 80.5 3.8 0.00013 35.3 6.8 43 60-103 15-58 (205)
461 2jsy_A Probable thiol peroxida 79.5 13 0.00045 30.1 9.8 95 270-366 44-166 (167)
462 2rli_A SCO2 protein homolog, m 78.8 11 0.00039 30.4 9.2 33 329-367 131-164 (171)
463 2dlx_A UBX domain-containing p 78.2 17 0.00057 29.5 9.7 90 267-369 39-138 (153)
464 3eur_A Uncharacterized protein 77.1 15 0.0005 28.7 9.1 81 271-363 32-141 (142)
465 3drn_A Peroxiredoxin, bacterio 76.9 9 0.00031 31.0 7.9 49 313-366 95-148 (161)
466 2bmx_A Alkyl hydroperoxidase C 76.8 4.8 0.00016 34.0 6.3 57 314-372 116-175 (195)
467 1xvw_A Hypothetical protein RV 76.2 12 0.00041 30.0 8.5 26 313-338 104-132 (160)
468 1z3e_A Regulatory protein SPX; 75.9 3.1 0.00011 33.0 4.5 34 64-106 3-36 (132)
469 3gn3_A Putative protein-disulf 75.9 1.7 5.9E-05 36.7 3.2 36 108-145 145-181 (182)
470 3gyk_A 27KDA outer membrane pr 74.6 28 0.00096 28.3 10.5 39 271-309 22-60 (175)
471 3l78_A Regulatory protein SPX; 73.8 3.8 0.00013 31.9 4.4 34 64-106 2-35 (120)
472 3ph9_A Anterior gradient prote 73.6 16 0.00056 29.5 8.5 65 173-237 45-120 (151)
473 2k6v_A Putative cytochrome C o 72.9 18 0.00061 29.2 8.8 41 270-311 35-81 (172)
474 1rw1_A Conserved hypothetical 72.4 2.8 9.5E-05 32.3 3.3 33 64-105 2-34 (114)
475 3feu_A Putative lipoprotein; a 71.3 2.9 0.0001 35.2 3.5 42 106-149 141-183 (185)
476 2ggt_A SCO1 protein homolog, m 70.5 25 0.00086 28.0 9.2 32 330-367 129-161 (164)
477 3ktb_A Arsenical resistance op 70.4 17 0.0006 27.4 7.1 65 78-146 25-102 (106)
478 3fz4_A Putative arsenate reduc 70.0 5.3 0.00018 31.0 4.5 34 64-106 5-38 (120)
479 3gmf_A Protein-disulfide isome 69.5 3.9 0.00013 35.2 3.9 40 107-150 157-197 (205)
480 3kgk_A Arsenical resistance op 66.6 19 0.00064 27.4 6.7 66 78-147 22-100 (110)
481 3c7m_A Thiol:disulfide interch 63.3 3.3 0.00011 34.8 2.2 42 106-149 151-193 (195)
482 2imf_A HCCA isomerase, 2-hydro 63.1 6.3 0.00022 33.5 4.0 40 106-149 156-195 (203)
483 3gkx_A Putative ARSC family re 62.6 5.8 0.0002 30.8 3.3 21 64-84 6-26 (120)
484 1we0_A Alkyl hydroperoxide red 62.2 14 0.00047 30.7 6.0 53 314-368 102-158 (187)
485 3gkn_A Bacterioferritin comigr 60.9 33 0.0011 27.3 8.1 35 328-365 125-160 (163)
486 3cmi_A Peroxiredoxin HYR1; thi 60.5 34 0.0012 27.6 8.1 40 269-310 31-72 (171)
487 2vup_A Glutathione peroxidase- 60.2 47 0.0016 27.4 9.1 93 269-368 47-186 (190)
488 1wwj_A Circadian clock protein 60.0 6.6 0.00023 29.6 3.0 60 61-122 7-66 (105)
489 1uul_A Tryparedoxin peroxidase 59.3 31 0.0011 29.0 7.8 51 314-366 110-164 (202)
490 1zye_A Thioredoxin-dependent p 59.0 28 0.00095 29.9 7.5 53 314-368 130-186 (220)
491 2v1m_A Glutathione peroxidase; 59.0 41 0.0014 26.8 8.4 36 328-369 133-169 (169)
492 1un2_A DSBA, thiol-disulfide i 58.1 6.1 0.00021 33.7 3.0 50 314-377 40-89 (197)
493 2g2q_A Glutaredoxin-2; thiored 55.9 24 0.00083 26.9 5.5 36 61-103 2-37 (124)
494 2ls5_A Uncharacterized protein 60.7 2.4 8.2E-05 34.3 0.0 49 314-370 102-151 (159)
495 1s3a_A NADH-ubiquinone oxidore 55.7 50 0.0017 24.5 7.4 75 64-149 22-98 (102)
496 1zof_A Alkyl hydroperoxide-red 55.4 10 0.00036 31.8 4.1 52 314-367 107-161 (198)
497 1v58_A Thiol:disulfide interch 55.3 51 0.0018 28.7 8.7 87 271-367 97-233 (241)
498 2k8s_A Thioredoxin; dimer, str 53.9 13 0.00045 25.8 3.8 50 281-333 10-61 (80)
499 2p5q_A Glutathione peroxidase 53.1 83 0.0028 24.9 9.4 92 269-367 31-168 (170)
500 3fz5_A Possible 2-hydroxychrom 52.5 11 0.00037 32.1 3.7 37 107-147 163-199 (202)
No 1
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=6.1e-45 Score=356.00 Aligned_cols=321 Identities=16% Similarity=0.249 Sum_probs=270.8
Q ss_pred ccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhh------HHHHHHHHHhhcCCCCeEEEEEeCccchhhhhh
Q 013240 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLA------PQLDEAAPILAKLKEPIVIAKVDADKYSRLASK 112 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~------p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~ 112 (447)
+...+.|+.||.+||+++++++++++|.||||||+||+... |.|+++++.+++. .+.|++|||+.++++|++
T Consensus 9 ~~~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~--~v~~~~Vd~~~~~~l~~~ 86 (367)
T 3us3_A 9 YDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK--GVGFGLVDSEKDAAVAKK 86 (367)
T ss_dssp CCCCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTTHHHHHH
T ss_pred CCCCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC--CceEEEEeCcccHHHHHH
Confidence 44567899999999999999899999999999999974333 7999999998753 499999999999999999
Q ss_pred CCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHH-hcCCcccEEEeecCCh-----hHH
Q 013240 113 QEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVE-NAGTFFPLFIGFGLDE-----SVM 186 (447)
Q Consensus 113 ~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~-~~~~~~~~vi~f~~~~-----~~~ 186 (447)
|+|+++||+++|++|+++.|.|.++.+.|++|+.+++.+++..+++.+++++++. ..+ +++|+|+... ..|
T Consensus 87 ~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~---~~vv~ff~~~~~~~~~~f 163 (367)
T 3us3_A 87 LGLTEEDSIYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDE---IKLIGYFKNKDSEHYKAF 163 (367)
T ss_dssp HTCCSTTEEEEEETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSS---CEEEEECSCTTCHHHHHH
T ss_pred cCCCcCceEEEEECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCC---cEEEEEECCCCchHHHHH
Confidence 9999999999999999999999999999999999999999999999899999987 333 5788877542 268
Q ss_pred HHHHHHhhhhhHhHHhhccchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-CChHHHHHHHHhhCCCCccccChhhHHh
Q 013240 187 SNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLNL 265 (447)
Q Consensus 187 ~~~a~~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~-~~~~~i~~fI~~~~~p~~~~l~~~~~~~ 265 (447)
..+|..+++.+.|+.+ .+.+++++|+++. |+|++|++..+.+..|.|. ++.+.|.+||..+.+|+++++++.++..
T Consensus 164 ~~~A~~~~~~~~F~~~--~~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~ 240 (367)
T 3us3_A 164 KEAAEEFHPYIPFFAT--FDSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYE 240 (367)
T ss_dssp HHHHHHHTTTSCEEEE--CCHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHH
T ss_pred HHHHHhhcCCcEEEEE--CCHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHH
Confidence 8999999988887765 4677899999985 9999999877778889995 8999999999999999999999999877
Q ss_pred hhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC---ceEEEEeccchHhHH----hhcCCCCCCCCceEEEEeC
Q 013240 266 LKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFA----DTFEANKKSKLPKMVVWDG 336 (447)
Q Consensus 266 ~~~~--~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~---~~f~~vd~~~~~~~~----~~~~i~~~~~~P~vvi~~~ 336 (447)
++.. ..+++++|++ .+....+++.+.|+.+|+++++ +.|+|+|+.+++..+ +.||+ . .++|+++|++.
T Consensus 241 ~~~~~~~~~~~~~f~~-~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl-~-~~~P~~~i~~~ 317 (367)
T 3us3_A 241 TWEDDMDGIHIVAFAE-EADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDI-D-LSAPQIGVVNV 317 (367)
T ss_dssp HHHSCBTTEEEEEECC-TTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTC-C-TTSCEEEEEET
T ss_pred HHhhccCCcEEEEEEc-CCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCC-C-CCCCeEEEEec
Confidence 6553 3456666654 3455578889999999999985 999999999887654 45999 4 57999999998
Q ss_pred Cc---cceecCCCCCCCcccchhHHHHHHHHHhcCccccc
Q 013240 337 NE---NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 373 (447)
Q Consensus 337 ~~---~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~~ 373 (447)
.+ .++.+.+. .++++.++|.+|++++++||++|.
T Consensus 318 ~~~~~~~y~~~~~---~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 318 TDADSVWMEMDDE---EDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp TTCCEEECCCCTT---SCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred ccccceeecCCcc---cccCCHHHHHHHHHHHHcCCcCcc
Confidence 53 24434321 246789999999999999999983
No 2
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=360.81 Aligned_cols=323 Identities=19% Similarity=0.342 Sum_probs=250.6
Q ss_pred CCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcC---CCCeEEEEEeCccchhhhhhCCCccc
Q 013240 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKL---KEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~---~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
.+.|+.||+++|+++++++++++|.||||||+||+++.|.|+++++.+++. .+.+.++.|||+.++++|++|+|+++
T Consensus 4 ~~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~ 83 (382)
T 2r2j_A 4 GSEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKY 83 (382)
T ss_dssp ----CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEE
T ss_pred CCceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcC
Confidence 467999999999999988999999999999999999999999999998643 23499999999999999999999999
Q ss_pred cEEEEEeCCeeE--EecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHH
Q 013240 119 PTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLAL 191 (447)
Q Consensus 119 Ptl~~~~~g~~~--~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~-----~~~~~~a~ 191 (447)
||+++|++|+.+ .|.|.++.+.|.+|+.+++.+++..+++.++++. +.... +++++|+.+. ..|..+|.
T Consensus 84 Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~---~~~v~ff~~~~~~~~~~f~~~A~ 159 (382)
T 2r2j_A 84 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSK---RNIIGYFEQKDSDNYRVFERVAN 159 (382)
T ss_dssp SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------C---CEEEEEESCSSSHHHHHHHHHHH
T ss_pred CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCC---CEEEEEECCCCChhHHHHHHHHH
Confidence 999999999876 5999999999999999999999999988777877 54333 4777776542 26888999
Q ss_pred HhhhhhHhHHhhccchhhhhhcCCCCCCeEEEEcCC--CCCcccccCCC-ChHHHHHHHHhhCCCCccccChhhHHhhhc
Q 013240 192 KYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPS--YNEHNIFYGPF-DEEFLEEFIKQNFLPLSVPINQDTLNLLKD 268 (447)
Q Consensus 192 ~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l~~~~~~--~~~~~~~~g~~-~~~~i~~fI~~~~~p~~~~l~~~~~~~~~~ 268 (447)
.+++.+.|+.+.+ ++.+.+++++.| ++|++. ......|.|.+ +.+.|.+||..+.+|.+++++..++..++.
T Consensus 160 ~~~~~~~F~~~~~---~~~~~~~v~~~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~ 234 (382)
T 2r2j_A 160 ILHDDCAFLSAFG---DVSKPERYSGDN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTE 234 (382)
T ss_dssp HHTTTCEEEEEES---CC--------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHT
T ss_pred HhhccceEEEEeh---hhHHhhCCCCCc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhc
Confidence 9998887766632 577788998888 455554 23467789998 899999999999999999999999999988
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSE 347 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~ 347 (447)
.+.+++++|+...+.+..+.+.+.+.+++.++++ +.|+|+|+.+++.+++.||+ +..++|+++|.+..+.|.+ .
T Consensus 235 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl-~~~~~P~i~i~~~~~~y~~-~--- 309 (382)
T 2r2j_A 235 EGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQK-TPADCPVIAIDSFRHMYVF-G--- 309 (382)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTC-CGGGCSEEEEECSSCEEEC-C---
T ss_pred CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCC-CccCCCEEEEEcchhcCCC-C---
Confidence 8889888888654445567777888888877776 99999999999999999999 5668999999987544432 2
Q ss_pred CCCcccchhHHHHHHHHHhcCccccccccCC
Q 013240 348 SIDEEDQGSQISRFLEGYREGRTEQKKVAGP 378 (447)
Q Consensus 348 ~~~~~~~~~~i~~Fl~~~~~gkl~~~~ks~p 378 (447)
..++.++.+.|.+|++++++||++++++|+|
T Consensus 310 ~~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~ 340 (382)
T 2r2j_A 310 DFKDVLIPGKLKQFVFDLHSGKLHREFHHGP 340 (382)
T ss_dssp CSGGGGSTTHHHHHHHHHHHTTTSSCC----
T ss_pred ccccccCHHHHHHHHHHHHCCCccccccCCC
Confidence 1234566789999999999999999999985
No 3
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=1.4e-43 Score=344.75 Aligned_cols=318 Identities=20% Similarity=0.294 Sum_probs=269.7
Q ss_pred ccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHH-------HHHHHHHhhcCCCCeEEEEEeCccchhhhh
Q 013240 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQ-------LDEAAPILAKLKEPIVIAKVDADKYSRLAS 111 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~-------~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~ 111 (447)
+...+.|+.||+++|++.++++++++|+||||||+ |+.+.|. |+++++.+++. ++.+++|||+.++++|+
T Consensus 7 ~~~~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~v~~~~Vd~~~~~~l~~ 83 (350)
T 1sji_A 7 YDGKDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--DIGFVMVDAKKEAKLAK 83 (350)
T ss_dssp CCCCCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--SEEEEEEETTTTHHHHH
T ss_pred CCCCCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--CcEEEEEeCCCCHHHHH
Confidence 34457899999999999999899999999999999 9999999 99999998764 49999999999999999
Q ss_pred hCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHH-hcCCcccEEEeecCC-h----hH
Q 013240 112 KQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVE-NAGTFFPLFIGFGLD-E----SV 185 (447)
Q Consensus 112 ~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~-~~~~~~~~vi~f~~~-~----~~ 185 (447)
+|+|+++||+++|++|++..|.|.++.+.|.+|+.+.+.+++.++++.++++++++ ..+ +++|+|+.. + ..
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~---~~vv~ff~~~~~~~~~~ 160 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQ---IKLIGFFKSEESEYYKA 160 (350)
T ss_dssp HHTCCSTTEEEEEETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSS---CEEEEECSCTTSHHHHH
T ss_pred hcCCCccceEEEEECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCC---cEEEEEECCCCcHHHHH
Confidence 99999999999999999888999999999999999999999999998889999987 544 478887754 1 36
Q ss_pred HHHHHHHhhhhhHhHHhhccchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-CChHHHHHHHHhhCCCCccccChhhHH
Q 013240 186 MSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLN 264 (447)
Q Consensus 186 ~~~~a~~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~-~~~~~i~~fI~~~~~p~~~~l~~~~~~ 264 (447)
|..+|..+++...|+.+ .+.+++++|+++ .|++++|++.++.+..|.|. ++.+.|.+||..+..|.++++|++++.
T Consensus 161 ~~~~A~~~~~~~~f~~~--~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~ 237 (350)
T 1sji_A 161 FEEAAEHFQPYIKFFAT--FDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMF 237 (350)
T ss_dssp HHHHHHHTTTTSEEEEE--CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHH
T ss_pred HHHHHHhhccCcEEEEE--CCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHH
Confidence 88899999888777765 467789999999 89999999876777889997 899999999999999999999999999
Q ss_pred hhhcCCC-c-EEEEEEeCCChhhHHHHHHHHHHHHHhCC---CceEEEEeccchHhHH----hhcCCCCCCCCceEEEEe
Q 013240 265 LLKDDKR-K-IVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQFADFA----DTFEANKKSKLPKMVVWD 335 (447)
Q Consensus 265 ~~~~~~~-~-~vl~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~~~~~~----~~~~i~~~~~~P~vvi~~ 335 (447)
.++..+. + ++++|. ........++.+.++++|++++ ++.|+|+|+.+++.++ +.||+ . .++|+++|++
T Consensus 238 ~~~~~~~~~~~~l~f~-~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi-~-~~~P~~~i~~ 314 (350)
T 1sji_A 238 ETWEDDLNGIHIVAFA-ERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKI-D-LFKPQIGVVN 314 (350)
T ss_dssp HHHHSCSSSEEEEEEC-CTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCS-C-TTSCEEEEEE
T ss_pred HHhcCCCCCcEEEEEE-cCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCC-C-ccCCcEEEEe
Confidence 9887654 4 344443 3333445688899999999986 3999999999988888 78999 3 4689999999
Q ss_pred CC-c-ccee-cCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 336 GN-E-NYLT-VIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 336 ~~-~-~y~~-~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
.. + +|.. +.+ .++.++.++|.+|++++++||+.
T Consensus 315 ~~~~~~~~~~~~~---~~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 315 VTDADSVWMEIPD---DDDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp SSSSCEEESCSSC---CSCCCCHHHHHHHHHHHHTSCC-
T ss_pred cccccccccCCCc---ccccCCHHHHHHHHHHHhcCccC
Confidence 83 3 4543 321 13567899999999999999974
No 4
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=6.4e-42 Score=347.58 Aligned_cols=332 Identities=26% Similarity=0.434 Sum_probs=276.6
Q ss_pred CCeEEeChhhHHHhHccC---CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 43 GKVIELDESNFDSAISSF---DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~---~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
++|+.||+++|++.+.++ ++++|.||+|||+||+++.|.|+++++.+++. +.|+.|||+.++++|++|+|+++|
T Consensus 1 s~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~P 77 (481)
T 3f8u_A 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI---VPLAKVDCTANTNTCNKYGVSGYP 77 (481)
T ss_dssp CCCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CCEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc---eEEEEEECCCCHHHHHhcCCCCCC
Confidence 368999999999999877 99999999999999999999999999998763 899999999999999999999999
Q ss_pred EEEEEeCCe-eEEecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHh
Q 013240 120 TLKIFMHGI-PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKY 193 (447)
Q Consensus 120 tl~~~~~g~-~~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~-----~~~~~~a~~~ 193 (447)
|+++|++|+ ...|.|.++.+.|.+|+.++++|.+.++.+.++++++++.++ +++|+|+.+. ..|..+|..+
T Consensus 78 tl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~vv~~~~~~~~~~~~~f~~~a~~~ 154 (481)
T 3f8u_A 78 TLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKD---ASIVGFFDDSFSEAHSEFLKAASNL 154 (481)
T ss_dssp EEEEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSS---CEEEEEESCTTCHHHHHHHHHHHHH
T ss_pred EEEEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCC---cEEEEEECCCccchHHHHHHHHHHh
Confidence 999999996 456999999999999999999999999999999999988764 4778776432 3788899999
Q ss_pred hhhhHhHHhhccchhhhhhcCCCCCCeEEEEcC------CCCCccccc-CCCChHHHHHHHHhhCCCCccccChhhHHhh
Q 013240 194 KKKAWFAVAKDFSEDTMVLYDFDKVPALVALQP------SYNEHNIFY-GPFDEEFLEEFIKQNFLPLSVPINQDTLNLL 266 (447)
Q Consensus 194 ~~~~~f~~~~~~~~~~~~~~~i~~~P~l~~~~~------~~~~~~~~~-g~~~~~~i~~fI~~~~~p~~~~l~~~~~~~~ 266 (447)
++.+.|+.+ .+.+++++|+++. +.+++|++ ..+....|. |.++.+.|.+||..+.+|+++++++.++..+
T Consensus 155 ~~~~~F~~~--~~~~~~~~~~v~~-~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~ 231 (481)
T 3f8u_A 155 RDNYRFAHT--NVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI 231 (481)
T ss_dssp TTTSCEEEE--CCHHHHHHHCSSS-EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHH
T ss_pred ccCceEEEE--CCHHHHHHhCCCC-CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHh
Confidence 988888765 4678999999987 45888883 334567788 7889999999999999999999999999988
Q ss_pred hcCCCcEEEEEEeCCC---hhhHHHHHHHHHHHHHhCCC----ceEEEEeccchHhHHhhcCCCC-CCCCceEEEEeCCc
Q 013240 267 KDDKRKIVLAIVEDET---EEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANK-KSKLPKMVVWDGNE 338 (447)
Q Consensus 267 ~~~~~~~vl~~~~~~~---~~~~~~~~~~l~~~a~~~~~----~~f~~vd~~~~~~~~~~~~i~~-~~~~P~vvi~~~~~ 338 (447)
.. .+++++++.... ....+.+.+.++++|+++++ +.|+++|+.++...++.||++. ..+.|.++|++.++
T Consensus 232 ~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~~~ 309 (481)
T 3f8u_A 232 QG--KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG 309 (481)
T ss_dssp TT--SSEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECSSS
T ss_pred cC--CCceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcCCC
Confidence 74 566666654322 22234467888999998764 9999999999999999999931 34799999998655
Q ss_pred cceecCCCCCCCcccchh--HHHHHHHHHhcCccccccccCC--c-ccccceEEeecc
Q 013240 339 NYLTVIGSESIDEEDQGS--QISRFLEGYREGRTEQKKVAGP--S-IFGFVNSLIGIR 391 (447)
Q Consensus 339 ~y~~~~g~~~~~~~~~~~--~i~~Fl~~~~~gkl~~~~ks~p--~-~~~~~~~~v~~~ 391 (447)
..+.+. ++++.+ +|.+|++++++|++++.++|+| . ..++++.++|.+
T Consensus 310 ~ky~~~------~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~ 361 (481)
T 3f8u_A 310 EKFVMQ------EEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAEN 361 (481)
T ss_dssp CEEECC------SCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTT
T ss_pred cccCCC------cccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccC
Confidence 444543 456777 9999999999999999999984 2 346777776554
No 5
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=2.6e-40 Score=337.57 Aligned_cols=334 Identities=22% Similarity=0.362 Sum_probs=275.3
Q ss_pred ccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccc
Q 013240 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
+..++.|..||+++|+++++++++++|.||||||+||+.+.|.|+++++.+++. ++.|+.|||+.++++|++|+|+++
T Consensus 10 ~~~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~ 87 (504)
T 2b5e_A 10 APEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTENQDLCMEHNIPGF 87 (504)
T ss_dssp CCTTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCCCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHhcCCCcC
Confidence 445678999999999999999999999999999999999999999999988763 499999999999999999999999
Q ss_pred cEEEEEeCCe---eEEecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCC-h----hHHHHHH
Q 013240 119 PTLKIFMHGI---PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E----SVMSNLA 190 (447)
Q Consensus 119 Ptl~~~~~g~---~~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~----~~~~~~a 190 (447)
||+++|++|+ ...|.|.++.+.|.+|+.+.+++++.++++ +++|++..+.. +.+++|+.+ . ..|..+|
T Consensus 88 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~-~~~v~~f~~~~~~~~~~f~~~A 163 (504)
T 2b5e_A 88 PSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFV-TPVIVQSGKIDADFNATFYSMA 163 (504)
T ss_dssp SEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCS-SCEEEEEESCCHHHHHHHHHHH
T ss_pred CEEEEEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCc-eEEEEEeCCCCchHHHHHHHHH
Confidence 9999999997 667999999999999999999999999987 88888876521 244444432 2 3788999
Q ss_pred HHhhhhhHhHHhhccchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-C---ChHHHHHHHHhhCCCCccccChhhHHhh
Q 013240 191 LKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-F---DEEFLEEFIKQNFLPLSVPINQDTLNLL 266 (447)
Q Consensus 191 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~-~---~~~~i~~fI~~~~~p~~~~l~~~~~~~~ 266 (447)
..+++.+.|+.+. ++.+.++++ +++|++.+ ....|.|. + +.+.|.+||..+.+|+++++|..++..+
T Consensus 164 ~~~~~~~~F~~~~----~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~ 234 (504)
T 2b5e_A 164 NKHFNDYDFVSAE----NADDDFKLS----IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQY 234 (504)
T ss_dssp HHTTTTCEEEEEE----CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHH
T ss_pred HHhhcCcEEEEEH----HHHHhcCCe----EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHH
Confidence 9999888887653 566777764 77777643 66678888 7 8999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCC-ccceecC
Q 013240 267 KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGN-ENYLTVI 344 (447)
Q Consensus 267 ~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~-~~y~~~~ 344 (447)
+..+.++++++++ ..+..+.+.+.++++|+++++ +.|+|+|+.+++.+++.||+ ..+.|+++|++.. +..|.+.
T Consensus 235 ~~~~~~~~~l~~~--~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~~~~~~~~~gl--~~~~P~v~i~~~~~~~ky~~~ 310 (504)
T 2b5e_A 235 VESGLPLGYLFYN--DEEELEEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNM--KEQFPLFAIHDMTEDLKYGLP 310 (504)
T ss_dssp HHTTSCEEEEEES--SHHHHHHHHHHHHHHHHHTTTTCEEEEEEHHHHTTHHHHTTC--CSCSSEEEEEETTTTEEEECC
T ss_pred hcCCCcEEEEEec--CcccHHHHHHHHHHHHHhcCCeeEEEEEehhhhHHHHHHcCC--cccCCEEEEEeCCcCcccCCC
Confidence 9988888887774 333447888999999999997 99999999999999999999 3689999999984 3333333
Q ss_pred --CC-----CCCCcccchhHHHHHHHHHhcCccccccccCC--c-ccccceEEeecc
Q 013240 345 --GS-----ESIDEEDQGSQISRFLEGYREGRTEQKKVAGP--S-IFGFVNSLIGIR 391 (447)
Q Consensus 345 --g~-----~~~~~~~~~~~i~~Fl~~~~~gkl~~~~ks~p--~-~~~~~~~~v~~~ 391 (447)
+. ......++.+.|.+|+.+++.|++.+..+|+| . ..+.+..+.|.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~ 367 (504)
T 2b5e_A 311 QLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKN 367 (504)
T ss_dssp CCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTT
T ss_pred CCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceeccccc
Confidence 11 00011267899999999999999999999874 2 245666665554
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=4.3e-32 Score=290.93 Aligned_cols=315 Identities=19% Similarity=0.242 Sum_probs=247.6
Q ss_pred cccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc
Q 013240 38 KFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 38 ~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
.+..++.|+.||.++|+++++++++++|+||+|||+||+.+.|.|+++++.+++. +.+++|||++++++|++|+|.+
T Consensus 111 ~~~~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~~~~l~~~~~v~~ 187 (780)
T 3apo_A 111 IYDDDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGL---LRIGAVNCGDDRMLCRMKGVNS 187 (780)
T ss_dssp TTTTCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCSSCC-------
T ss_pred ccCCCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCc---eEEEEEeCCCcHHHHHHcCCce
Confidence 4566788999999999999998999999999999999999999999999988653 9999999999999999999999
Q ss_pred ccEEEEEeCCee-EEecCCCCHHHHHHHHHHhcCCCceecCCh---hHHHHHHHhcCCcccEEEeecCCh------hHHH
Q 013240 118 FPTLKIFMHGIP-TEYYGPRKAELLVRYLKKFVAPDVSILNSD---AEVSDFVENAGTFFPLFIGFGLDE------SVMS 187 (447)
Q Consensus 118 ~Ptl~~~~~g~~-~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~---~~~~~~l~~~~~~~~~vi~f~~~~------~~~~ 187 (447)
+||+++|++|+. ..|.|.++.+.|.+|+.+++++.+.++++. +++++++..+ .+++++|+++. ..+.
T Consensus 188 ~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~---~~~vi~f~~~~~~~~~~~~~~ 264 (780)
T 3apo_A 188 YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAG---VGWLITFCSKGEDCLTSQTRL 264 (780)
T ss_dssp -CEEEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHT---CEEEEEEECTTSCCCCHHHHH
T ss_pred eeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccC---CCEEEEEecCcccccCHHHHH
Confidence 999999999984 679999999999999999999999999877 5778887653 25777776432 2455
Q ss_pred HHHHHhhhhhHhH-------------------------------------------------------------------
Q 013240 188 NLALKYKKKAWFA------------------------------------------------------------------- 200 (447)
Q Consensus 188 ~~a~~~~~~~~f~------------------------------------------------------------------- 200 (447)
.++..|++.+.|+
T Consensus 265 ~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~ 344 (780)
T 3apo_A 265 RLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQ 344 (780)
T ss_dssp HHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHH
T ss_pred HHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHH
Confidence 5555543211111
Q ss_pred ------------------------------------------Hh-hccchhhhhhcCCCCCCeEEEEcCCC-CCcccccC
Q 013240 201 ------------------------------------------VA-KDFSEDTMVLYDFDKVPALVALQPSY-NEHNIFYG 236 (447)
Q Consensus 201 ------------------------------------------~~-~~~~~~~~~~~~i~~~P~l~~~~~~~-~~~~~~~g 236 (447)
.+ ...+..+++.|++.. |++++++..+ +....|.|
T Consensus 345 f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~-p~i~l~~~~~~e~~~~~~g 423 (780)
T 3apo_A 345 LEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQ-PSLAVFKGQGTKEYEIHHG 423 (780)
T ss_dssp HHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCS-CEEEEEESSTTSSEEECCS
T ss_pred HHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccC-ChhhhccCCCcceeeeccc
Confidence 00 001234667788875 9999998865 44677889
Q ss_pred CCChHHHHHHHHhhCCCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHh
Q 013240 237 PFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFAD 315 (447)
Q Consensus 237 ~~~~~~i~~fI~~~~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~ 315 (447)
.++.+.|.+|+..+..|.+.+++.+++..+ .++++++.|+.. ...........|.++|+++++ +.|+.||+.+.++
T Consensus 424 ~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~-wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~ 500 (780)
T 3apo_A 424 KKILYDILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAP-WSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEG 500 (780)
T ss_dssp CCCHHHHHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred HhhHHHHHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECC-CCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHH
Confidence 999999999999999999999999999887 567888878753 445566788999999999975 9999999999999
Q ss_pred HHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 316 FADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 316 ~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
+++.||+ ..+|++++++.+.. +.+. +..+.+.|.+|+++++++.+..
T Consensus 501 ~~~~~~v---~~~Pt~~~~~~g~~-~~~~------g~~~~~~l~~fi~~~~~~~v~~ 547 (780)
T 3apo_A 501 LCNMYNI---QAYPTTVVFNQSSI-HEYE------GHHSAEQILEFIEDLRNPSVVS 547 (780)
T ss_dssp HHHHTTC---CSSSEEEEEETTEE-EEEC------SCSCHHHHHHHHHHHHSCSEEE
T ss_pred HHHHcCC---CcCCeEEEEcCCce-eeec------CcccHHHHHHHHHhhcccceee
Confidence 9999999 56999999976443 3343 3456789999999999865433
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=1.3e-29 Score=271.66 Aligned_cols=314 Identities=16% Similarity=0.221 Sum_probs=256.3
Q ss_pred CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
+.|..+|.++|++. .+++++|.||++||++|+.+.|.|.++++.+++ ++.|+.|||++++++|+.|+|+++|+++
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 514 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG---QLKVGTLDCTIHEGLCNMYNIQAYPTTV 514 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEeCCCCHHHHHHcCCCcCCeEE
Confidence 45899999999887 678999999999999999999999999998864 4999999999999999999999999999
Q ss_pred EEeCCeeEEecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHHhh
Q 013240 123 IFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALKYK 194 (447)
Q Consensus 123 ~~~~g~~~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~--------~~~~~~a~~~~ 194 (447)
++++|+...|.|.++.++|.+|+.+.+.+++..++ .+++++++.......++++.|+... +.+.++|..++
T Consensus 515 ~~~~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~ 593 (780)
T 3apo_A 515 VFNQSSIHEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLT 593 (780)
T ss_dssp EEETTEEEEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCceeeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh
Confidence 99999888899999999999999999999999997 5689998876543445777776432 36778888888
Q ss_pred hhhHhHHhh-ccchhhhhhcCCCCCCeEEEEcCCCC---CcccccC-CCChHHHHHHHHhhCCCCccccChhhHHh-hhc
Q 013240 195 KKAWFAVAK-DFSEDTMVLYDFDKVPALVALQPSYN---EHNIFYG-PFDEEFLEEFIKQNFLPLSVPINQDTLNL-LKD 268 (447)
Q Consensus 195 ~~~~f~~~~-~~~~~~~~~~~i~~~P~l~~~~~~~~---~~~~~~g-~~~~~~i~~fI~~~~~p~~~~l~~~~~~~-~~~ 268 (447)
+...|+.+. +....++..|++.++|++++|+.+.. .+..|.| .++.+.|.+||..+..|.+..++..++.. +..
T Consensus 594 ~~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~~ 673 (780)
T 3apo_A 594 GLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVLQ 673 (780)
T ss_dssp TTSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTTT
T ss_pred CCeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHhc
Confidence 766555542 23456778899999999999987644 3456889 88999999999999999999999999965 666
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSE 347 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~ 347 (447)
.++++++.|+. .....-......+.++|+++++ +.|+.+|+.+.+.+++.+|+ ...|+++++..++....+.|..
T Consensus 674 ~~~~v~v~F~a-~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~~G~~ 749 (780)
T 3apo_A 674 GKTHWVVDFYA-PWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSVKLYQYERAKKSIWEEQ 749 (780)
T ss_dssp CSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCC---CcCCEEEEEcCCCccccccCcc
Confidence 77788887775 3555566778889999998864 99999999999999999999 7899999985443222222210
Q ss_pred CCCcccchhHHHHHHHHHhcC
Q 013240 348 SIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 348 ~~~~~~~~~~i~~Fl~~~~~g 368 (447)
. +..+.+.|.+|+...+..
T Consensus 750 ~--g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 750 I--NSRDAKTIAALIYGKLET 768 (780)
T ss_dssp E--CCCCHHHHHHHHHHHTTC
T ss_pred c--CCcCHHHHHHHHHHHHHH
Confidence 0 134678999999998854
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-30 Score=244.52 Aligned_cols=216 Identities=24% Similarity=0.401 Sum_probs=184.3
Q ss_pred cCCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhCCCc
Q 013240 40 KIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQEID 116 (447)
Q Consensus 40 ~~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~--~~~~l~~~~~i~ 116 (447)
..++.|++||+++|++++ +.+++++|+|||+||++|+.+.|.|.++++.+.+ .+.++.|||+ .++++|++|+|.
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~---~~~~~~v~~d~~~~~~l~~~~~I~ 90 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG---VVQVAAVNCDLNKNKALCAKYDVN 90 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC---CcEEEEEEccCccCHHHHHhCCCC
Confidence 346789999999999999 5678999999999999999999999999998865 3889999998 689999999999
Q ss_pred cccEEEEEeCCe------------------eEEecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEe
Q 013240 117 AFPTLKIFMHGI------------------PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIG 178 (447)
Q Consensus 117 ~~Ptl~~~~~g~------------------~~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~ 178 (447)
++||+++|++|+ +..|.|.++.+.|++|+.+.+.+.+..+.+.+++++|+...+ .+.+++
T Consensus 91 ~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~--~~~vi~ 168 (298)
T 3ed3_A 91 GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSP--KLSVVL 168 (298)
T ss_dssp BSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCS--SEEEEE
T ss_pred ccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCC--ceEEEE
Confidence 999999999986 567999999999999999999999999999999999998763 356777
Q ss_pred ecCCh---hHHHHHHHHhhhhhHhHHhhccchhhhhh-----cC-----C-------------CCCCeEEEEcCCCCCcc
Q 013240 179 FGLDE---SVMSNLALKYKKKAWFAVAKDFSEDTMVL-----YD-----F-------------DKVPALVALQPSYNEHN 232 (447)
Q Consensus 179 f~~~~---~~~~~~a~~~~~~~~f~~~~~~~~~~~~~-----~~-----i-------------~~~P~l~~~~~~~~~~~ 232 (447)
|..+. ..|+.+|..|++.+.|+.+.+ .++... |+ + ...|+|++|++..+.+.
T Consensus 169 fs~~~~~~~~f~~~A~~~~~~~~F~~v~~--~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 169 FSKQDKISPVYKSIALDWLGKFDFYSISN--KKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp EESSSSCCHHHHHHHHHTBTTEEEEEEEG--GGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred EcCCCcchHHHHHHHHHhhcCcEEEEEcc--hHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 75443 489999999999888887742 333322 22 2 56799999998878888
Q ss_pred cccC-CCChHHHHHHHH--hhCCCCccccChhh
Q 013240 233 IFYG-PFDEEFLEEFIK--QNFLPLSVPINQDT 262 (447)
Q Consensus 233 ~~~g-~~~~~~i~~fI~--~~~~p~~~~l~~~~ 262 (447)
.|.| .++.+.|.+||. .+..|.+.+++...
T Consensus 247 ~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 247 EYEGNSINKNDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp ECCCSSCCHHHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred EeccccCCHHHHHHHHHhhcCCCCCcCCCchHH
Confidence 9995 689999999999 77999999999744
No 9
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.95 E-value=5.3e-27 Score=215.70 Aligned_cols=210 Identities=28% Similarity=0.500 Sum_probs=175.6
Q ss_pred ccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccc
Q 013240 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
....+.|..|++++|++++.++++++|+||++||++|+.+.|.|.++++.+++.+..+.++.|||+.++++|++|+|+++
T Consensus 11 ~~~~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 90 (241)
T 3idv_A 11 VKEENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY 90 (241)
T ss_dssp CEEETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS
T ss_pred cccCCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC
Confidence 44467899999999999999999999999999999999999999999999987666799999999999999999999999
Q ss_pred cEEEEEeCCeeEEecCCCCHHHHHHHHHHhcCCC-------ceecCChhHHHHHHHhcCCcccEEEeecCCh--------
Q 013240 119 PTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPD-------VSILNSDAEVSDFVENAGTFFPLFIGFGLDE-------- 183 (447)
Q Consensus 119 Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~~~~-------v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~-------- 183 (447)
||+++|++|+.+.|.|.++.+.|.+|+.+...+. +..+ +.+++++++.... ++++.|+...
T Consensus 91 Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~v~f~a~wC~~C~~~~ 166 (241)
T 3idv_A 91 PTIKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVL-TKENFDEVVNDAD---IILVEFYAPWCGHCKKLA 166 (241)
T ss_dssp SEEEEEETTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEEC-CTTTHHHHHHHCS---EEEEEEECTTCTGGGGTH
T ss_pred CEEEEEcCCCcccccCcccHHHHHHHHhhccCcccccccccceec-cHHHHHHhhccCC---eEEEEEECCCCHHHHHhH
Confidence 9999999999999999999999999999988653 4444 4567988887654 5777776431
Q ss_pred hHHHHHHHHhhhh---hHhHHh-hccchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCChHHHHHHHHhhCCCC
Q 013240 184 SVMSNLALKYKKK---AWFAVA-KDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPL 254 (447)
Q Consensus 184 ~~~~~~a~~~~~~---~~f~~~-~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~~~~~~i~~fI~~~~~p~ 254 (447)
+.+..+|..+.+. ..|..+ .+...+++.+|++.++|++++|+++ ....|.|.++.+.|.+||.++.-|.
T Consensus 167 p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 167 PEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKG--RPYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETT--EEEECCSCCSHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECC--eEEEecCCCCHHHHHHHHHhhhCCC
Confidence 3677788887653 333333 3346788999999999999999863 4455899999999999999987664
No 10
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.93 E-value=2.2e-24 Score=198.70 Aligned_cols=211 Identities=16% Similarity=0.232 Sum_probs=157.6
Q ss_pred cccccCCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC--ccchhhhhh
Q 013240 36 ETKFKIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASK 112 (447)
Q Consensus 36 ~~~~~~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~--~~~~~l~~~ 112 (447)
+.++...+.|..|++++|++.+ +.+++++|+|||+||++|+++.|.|+++++.+.+.+..+.|+.||| +.++++|++
T Consensus 5 ~~l~~~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~ 84 (244)
T 3q6o_A 5 SALYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRD 84 (244)
T ss_dssp -CCSCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHH
T ss_pred cCCCCCCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHH
Confidence 3445667899999999999988 4559999999999999999999999999999987555699999999 678999999
Q ss_pred CCCccccEEEEEeCC------eeEEecCCCCHHHHHHHHHHhcCCCce---------ecCChhHHHHHHHhcCCcccEEE
Q 013240 113 QEIDAFPTLKIFMHG------IPTEYYGPRKAELLVRYLKKFVAPDVS---------ILNSDAEVSDFVENAGTFFPLFI 177 (447)
Q Consensus 113 ~~i~~~Ptl~~~~~g------~~~~y~g~~~~~~i~~fi~~~~~~~v~---------~i~s~~~~~~~l~~~~~~~~~vi 177 (447)
|+|.++||+++|.+| ....+.| ++.+.|.+++.+++..... ...+.+++..++..+... +.++
T Consensus 85 ~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~-~~al 162 (244)
T 3q6o_A 85 FNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEE-YLAL 162 (244)
T ss_dssp TTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCS-EEEE
T ss_pred cCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCc-eEEE
Confidence 999999999999974 3444556 7999999999888754331 233567899998875543 3445
Q ss_pred eecCCh-hHHHHHHHHhhhhhHh--HHhhccchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-CChHHHHHHHHh
Q 013240 178 GFGLDE-SVMSNLALKYKKKAWF--AVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQ 249 (447)
Q Consensus 178 ~f~~~~-~~~~~~a~~~~~~~~f--~~~~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~-~~~~~i~~fI~~ 249 (447)
.|.+.. ....+++..+....++ ..+.+.+.+++++|+++++|+++++.+++ ....+... -+...+..+++.
T Consensus 163 ~f~~~~~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~~ 237 (244)
T 3q6o_A 163 IFEXGGSYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQR 237 (244)
T ss_dssp EEECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTS-CEEECCCSSSSHHHHHHHHHT
T ss_pred EEEECCcchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCC-CeEeeccccccHHHHHHHHHh
Confidence 554443 3667777777754333 33344457899999999999999998753 33334333 334555555553
No 11
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.92 E-value=6.4e-24 Score=196.02 Aligned_cols=224 Identities=14% Similarity=0.193 Sum_probs=175.1
Q ss_pred hcCCCceecCChhHHHHHHHh-cCCcccEEEeecCCh-----hHHHHHHHHhhhhhHhHHhhccchhhhhhcCCCCCCeE
Q 013240 148 FVAPDVSILNSDAEVSDFVEN-AGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 221 (447)
Q Consensus 148 ~~~~~v~~i~s~~~~~~~l~~-~~~~~~~vi~f~~~~-----~~~~~~a~~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l 221 (447)
+.+|++++|++.+++++|++. ++ +++|+|+.+. ..|.++|..+++.+.|+.+ .+.+++.+|+++. |++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~---v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t--~~~~v~~~~~v~~-p~i 76 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDD---VVILGVFQGVGDPGYLQYQDAANTLREDYKFHHT--FSTEIAKFLKVSL-GKL 76 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSS---CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEE--CCHHHHHHHTCCS-SEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCC---eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEE--CcHHHHHHcCCCC-CeE
Confidence 578999999999999999987 55 5899988652 3788999999998888765 4678889999986 999
Q ss_pred EEEcCC------CCCccccc--CCCChHHHHHHHHhhCCCCccccChhhHHhhhcCCCcEEEEEEeCC-C---hhhHHHH
Q 013240 222 VALQPS------YNEHNIFY--GPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDE-T---EEKSQKL 289 (447)
Q Consensus 222 ~~~~~~------~~~~~~~~--g~~~~~~i~~fI~~~~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~-~---~~~~~~~ 289 (447)
++|++. ++....|. |.++.+.|.+||..+.+|++.++|++++..+.. +.+++++++..+ . .+..+.+
T Consensus 77 vlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~ 155 (250)
T 3ec3_A 77 VLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFW 155 (250)
T ss_dssp EEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHH
T ss_pred EEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHH
Confidence 999973 35567788 478999999999999999999999999988774 677777676421 1 4556778
Q ss_pred HHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCC-ceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 290 VTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL-PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 290 ~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~-P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
.+.++++|++++++.|+|+|+.++...++.||+ ...+. |.+++++.++..|.+. .++++.++|.+|++++++|
T Consensus 156 ~~~~~~vAk~~kki~F~~~d~~~~~~~l~~fgl-~~~~~~p~~~~~~~~~~ky~~~-----~~~~t~~~i~~Fv~~~~~G 229 (250)
T 3ec3_A 156 RNKVLEVAKDFPEYTFAIADEEDYATEVKDLGL-SESGGDVNAAILDESGKKFAME-----PEEFDSDALREFVMAFKKG 229 (250)
T ss_dssp HHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC-SSCSCSCEEEEECTTSCEEECC-----CCSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcceeEEEEcHHHHHHHHHHcCC-CccCCCcEEEEEcCCCceecCC-----cccCCHHHHHHHHHHHHCC
Confidence 899999999999999999999999999999999 44444 6888888765455553 2467899999999999999
Q ss_pred ccccccccC--Cc-ccccc
Q 013240 369 RTEQKKVAG--PS-IFGFV 384 (447)
Q Consensus 369 kl~~~~ks~--p~-~~~~~ 384 (447)
|+++++||+ |+ ..++|
T Consensus 230 kl~p~~kSepiPe~~~~pV 248 (250)
T 3ec3_A 230 KLKPVIKSQPVPKNNKGAA 248 (250)
T ss_dssp CCCCCC-------------
T ss_pred CccceeecCCCCCCCCCCC
Confidence 999999999 44 34665
No 12
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.92 E-value=5.8e-24 Score=196.70 Aligned_cols=225 Identities=17% Similarity=0.278 Sum_probs=169.5
Q ss_pred HhcCCCceecCChhHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHhHHhhccchhhhhhcCCCCCCeE
Q 013240 147 KFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 221 (447)
Q Consensus 147 ~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~-----~~~~~~a~~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l 221 (447)
++++|++++|++.++++.|+..++ +++|+|+.+. ..|..+|..+++.+.|+.+ .+++++++|+++. |++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~---v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~--~~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKD---ASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT--NVESLVNEYDDNG-EGI 75 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSS---CEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEE--CCHHHHHHHCSSS-EEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCC---eEEEEEECCCCChHHHHHHHHHHhcccCcEEEEE--ChHHHHHHhCCCC-CcE
Confidence 467899999999999999998765 4888887652 3688899999998888776 4677999999996 999
Q ss_pred EEEcCC------CCCcccc-cCCCChHHHHHHHHhhCCCCccccChhhHHhhhcCCCcEEEEEEeCCC---hhhHHHHHH
Q 013240 222 VALQPS------YNEHNIF-YGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDET---EEKSQKLVT 291 (447)
Q Consensus 222 ~~~~~~------~~~~~~~-~g~~~~~~i~~fI~~~~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~---~~~~~~~~~ 291 (447)
++|+++ ++....| .|+++.+.|.+||..+.+|++.++|.+++..+. +.+++++++.... .+..+.+.+
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~ 153 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQ--GKDLLIAYYDVDYEKNAKGSNYWRN 153 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHS--SSSEEEEEECCBTTTBHHHHHHHHH
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhc--CCCeEEEEeecchhhcchhHHHHHH
Confidence 999973 2456678 899999999999999999999999999998884 3455555553222 233456888
Q ss_pred HHHHHHHhCCC----ceEEEEeccchHhHHhhcCCC-CCCCCceEEEEeCCccceecCCCCCCCcccchhH--HHHHHHH
Q 013240 292 TLKAAASANRE----LVFCYVGIKQFADFADTFEAN-KKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQ--ISRFLEG 364 (447)
Q Consensus 292 ~l~~~a~~~~~----~~f~~vd~~~~~~~~~~~~i~-~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~--i~~Fl~~ 364 (447)
.++++|+++++ +.|+|+|+.++...++.||++ +..++|+++|++.++.+|.+. ++++.+. |.+|+++
T Consensus 154 ~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~------~~~t~~~~~i~~F~~~ 227 (252)
T 2h8l_A 154 RVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQ------EEFSRDGKALERFLQD 227 (252)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECC------SCCCTTSHHHHHHHHH
T ss_pred HHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCC------cccCcchHHHHHHHHH
Confidence 89999998863 999999999999999999993 126899999998755444443 2456677 9999999
Q ss_pred HhcCccccccccC--Cc-ccccce
Q 013240 365 YREGRTEQKKVAG--PS-IFGFVN 385 (447)
Q Consensus 365 ~~~gkl~~~~ks~--p~-~~~~~~ 385 (447)
+++|+++++++|+ |+ ..++|+
T Consensus 228 ~~~Gkl~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 228 YFDGNLKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp HHHTCSCCCC--------------
T ss_pred HHCCCccccccCCCCCCCCCCCCC
Confidence 9999999999998 44 457764
No 13
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.88 E-value=6.1e-22 Score=200.06 Aligned_cols=210 Identities=16% Similarity=0.214 Sum_probs=159.4
Q ss_pred ccccCCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhC
Q 013240 37 TKFKIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQ 113 (447)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~--~~~~l~~~~ 113 (447)
..+..++.|..|++++|++.+ +.+++++|+|||+||++|+.+.|.|+++++.+++.+..+.|+.|||+ .++++|++|
T Consensus 6 ~Ly~~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~ 85 (519)
T 3t58_A 6 VLYSSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREF 85 (519)
T ss_dssp CSCCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHT
T ss_pred ccCCCCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHc
Confidence 445667889999999999987 55689999999999999999999999999999875556999999995 589999999
Q ss_pred CCccccEEEEEeCC----ee-EEecCCCCHHHHHHHHHHhcCCCc----------eecCChhHHHHHHHhcCCcccEEEe
Q 013240 114 EIDAFPTLKIFMHG----IP-TEYYGPRKAELLVRYLKKFVAPDV----------SILNSDAEVSDFVENAGTFFPLFIG 178 (447)
Q Consensus 114 ~i~~~Ptl~~~~~g----~~-~~y~g~~~~~~i~~fi~~~~~~~v----------~~i~s~~~~~~~l~~~~~~~~~vi~ 178 (447)
+|.++||+++|.+| +. ..+.|.++.+.|.+++.+.+.... ..+ +.+++.+++...... ++++.
T Consensus 86 ~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~i-t~~~l~~~l~~~~~~-~vall 163 (519)
T 3t58_A 86 NIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPA-KLNDIDGFFTRNKAD-YLALV 163 (519)
T ss_dssp TCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBC-CHHHHTTGGGSCCCS-EEEEE
T ss_pred CCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcC-CHHHHHHHhccCCCC-eEEEE
Confidence 99999999999954 33 347888999999999998876432 333 456788888775443 46666
Q ss_pred ecCChh-HHHHHHHHhhhh--hHhHHhhccchhhhhhcCCCCCCeEEEEcCCCCCcccccCCC-ChHHHHHHHHh
Q 013240 179 FGLDES-VMSNLALKYKKK--AWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPF-DEEFLEEFIKQ 249 (447)
Q Consensus 179 f~~~~~-~~~~~a~~~~~~--~~f~~~~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~~-~~~~i~~fI~~ 249 (447)
|.+... ...+++..+... ..+..+.+.+.+++++|+|+.+|+++++.++++. ..+.... ....+..+++.
T Consensus 164 F~~~~s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~-~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 164 FEREDSYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSV-SRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp EECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCE-EECCCSSCSHHHHHHHHTT
T ss_pred ecCCchHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCce-eecccccccHHHHHHHHHH
Confidence 665544 677788877754 3334444556789999999999999999875432 1222222 23445666654
No 14
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.88 E-value=4.7e-22 Score=163.80 Aligned_cols=110 Identities=23% Similarity=0.410 Sum_probs=97.9
Q ss_pred ccCCCCeEEeChhhHHHhHc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhc--CCCCeEEEEEeCccchhhhhhCCC
Q 013240 39 FKIDGKVIELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAK--LKEPIVIAKVDADKYSRLASKQEI 115 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~-~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~--~~~~v~~~~Vd~~~~~~l~~~~~i 115 (447)
+..++.|..|++++|++.+. .+++++|.||++||++|+.+.|.|.++++.+.. ..+.+.++.|||++++++|++|+|
T Consensus 11 ~~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v 90 (127)
T 3h79_A 11 GERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRV 90 (127)
T ss_dssp --CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTC
T ss_pred cCCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCC
Confidence 45568899999999999994 589999999999999999999999999988753 235699999999999999999999
Q ss_pred ccccEEEEEeCCee---EEecCCCCHHHHHHHHHHh
Q 013240 116 DAFPTLKIFMHGIP---TEYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 116 ~~~Ptl~~~~~g~~---~~y~g~~~~~~i~~fi~~~ 148 (447)
.++||+++|.+|.. ..|.|.++.+.|.+|+.++
T Consensus 91 ~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 91 SGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 99999999998754 5799999999999999875
No 15
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.88 E-value=2e-21 Score=176.70 Aligned_cols=207 Identities=18% Similarity=0.282 Sum_probs=167.7
Q ss_pred CCCceecCChhHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHhHHhhccchhhhhhcCCCCCCeEEEE
Q 013240 150 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVAL 224 (447)
Q Consensus 150 ~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~-----~~~~~~a~~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l~~~ 224 (447)
...+++|.+.+++++++..++ +++|+|+.+. ..|.++|..++ .+.|+. +.+++++.+|+++. |++++|
T Consensus 8 ~~~~~~l~s~~~~~~~l~~~~---v~vVgff~~~~~~~~~~f~~~A~~l~-~~~F~~--t~~~~v~~~~~v~~-p~i~lf 80 (227)
T 4f9z_D 8 AQEPTWLTDVPAAMEFIAATE---VAVIGFFQDLEIPAVPILHSMVQKFP-GVSFGI--STDSEVLTHYNITG-NTICLF 80 (227)
T ss_dssp -CCCEECCSHHHHHHHHHTSS---EEEEEECSCSCSTHHHHHHHHTTTCT-TSEEEE--ECCHHHHHHTTCCS-SEEEEE
T ss_pred cCCCeeeCCHHHHHHHHhcCC---eEEEEEecCCCchhHHHHHHHHHhCC-CceEEE--ECCHHHHHHcCCCC-CeEEEE
Confidence 346788999999999998754 5888988642 36888898884 555554 35778999999987 999999
Q ss_pred cCCCCCcccccC----CCChHHHHHHHHhhCCCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhC
Q 013240 225 QPSYNEHNIFYG----PFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASAN 300 (447)
Q Consensus 225 ~~~~~~~~~~~g----~~~~~~i~~fI~~~~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~ 300 (447)
++.++....|.| +++.+.|.+||+.+.+|++.++|++++..++..+.+.+++++.+.+....+++.+.++++|+++
T Consensus 81 k~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~ 160 (227)
T 4f9z_D 81 RLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLF 160 (227)
T ss_dssp ETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHT
T ss_pred EecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHh
Confidence 986666667774 7999999999999999999999999999988888777766554444556778889999999999
Q ss_pred CC-ceEEEEecc--chHhHHhhcCCCCCCCCceEEEEeCCc-cceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 301 RE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 301 ~~-~~f~~vd~~--~~~~~~~~~~i~~~~~~P~vvi~~~~~-~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
++ +.|+|+|+. ++...++.||+ +..++|+++|++..+ .++.+. .++++.++|.+|++++++||
T Consensus 161 k~~i~F~~vd~~~~~~~~~l~~fgl-~~~~~P~~~i~~~~~~~ky~~~-----~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 161 QGKILFILVDSGMKENGKVISFFKL-KESQLPALAIYQTLDDEWDTLP-----TAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp TTTCEEEEEETTSGGGHHHHHHTTC-CGGGCSEEEEEESSSCCEEEET-----TCCCCHHHHHHHHHHHHTTC
T ss_pred hCCEEEEEeCCccHhHHHHHHHcCC-CcccCCEEEEEECCCCccccCC-----cCCCCHHHHHHHHHHHhCCC
Confidence 97 999999995 47788999999 556899999999754 344443 24578999999999999997
No 16
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=2.7e-21 Score=161.97 Aligned_cols=120 Identities=38% Similarity=0.713 Sum_probs=109.2
Q ss_pred cccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCC
Q 013240 36 ETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (447)
Q Consensus 36 ~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i 115 (447)
.......+.|..|++++|++.+.++++++|+||++||++|+.+.|.|.++++.+.+.+..+.++.|||+.++++|++|+|
T Consensus 10 ~~~~~~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v 89 (140)
T 2dj1_A 10 DLEVKEENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDV 89 (140)
T ss_dssp CSCCEEETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTC
T ss_pred ccccCCCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCC
Confidence 34445567899999999999998899999999999999999999999999999887655699999999999999999999
Q ss_pred ccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhcCCCcee
Q 013240 116 DAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSI 155 (447)
Q Consensus 116 ~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~~~~v~~ 155 (447)
.++|++++|++|+...|.|.++.+.|.+|+.+++.++...
T Consensus 90 ~~~Pt~~~~~~G~~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 90 SGYPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp CSSSEEEEEETTEEEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred CccCeEEEEECCcEEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 9999999999999767999999999999999999877654
No 17
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.86 E-value=4e-21 Score=152.27 Aligned_cols=99 Identities=29% Similarity=0.647 Sum_probs=87.3
Q ss_pred eEEe-ChhhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 45 VIEL-DESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 45 v~~l-~~~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
|.++ +.++|++.+. ++++++|+|||+||++|+.+.|.|+++++.+.+ +.|+.||+++++++|++|+|+++||+
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~----~~~~~vd~d~~~~l~~~~~V~~~PT~ 77 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD----VVFLKVDVDECEDIAQDNQIACMPTF 77 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEETTTCHHHHHHTTCCBSSEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC----eEEEEEecccCHHHHHHcCCCeecEE
Confidence 3455 4578999984 368999999999999999999999999987643 89999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHHh
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKKF 148 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~~ 148 (447)
++|++|+.+. +.| ++.+.|.+|++++
T Consensus 78 ~~~~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 78 LFMKNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 9999999886 666 6899999999875
No 18
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.84 E-value=5e-21 Score=155.52 Aligned_cols=115 Identities=42% Similarity=0.712 Sum_probs=104.5
Q ss_pred ccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccc
Q 013240 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
+..++.|..+++++|+++++++++++|.||++||++|+.+.|.|.++++.+++.+..+.++.|||+.++++|++|+|.++
T Consensus 3 ~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 82 (120)
T 1mek_A 3 PEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGY 82 (120)
T ss_dssp CCEETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSS
T ss_pred ccCCCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcc
Confidence 34567899999999999999899999999999999999999999999998876555699999999999999999999999
Q ss_pred cEEEEEeCCee---EEecCCCCHHHHHHHHHHhcCCCc
Q 013240 119 PTLKIFMHGIP---TEYYGPRKAELLVRYLKKFVAPDV 153 (447)
Q Consensus 119 Ptl~~~~~g~~---~~y~g~~~~~~i~~fi~~~~~~~v 153 (447)
|++++|++|+. ..|.|.++.+.|.+|+.+++.+++
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~~ 120 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAA 120 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCCC
T ss_pred cEEEEEeCCCcCCcccccCccCHHHHHHHHHhccCCCC
Confidence 99999999975 468999999999999999987753
No 19
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.84 E-value=1.4e-19 Score=176.45 Aligned_cols=231 Identities=21% Similarity=0.256 Sum_probs=185.2
Q ss_pred HhcCCCceecCChhHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHhHHhhccchhhhhhcCCCCCCeE
Q 013240 147 KFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 221 (447)
Q Consensus 147 ~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~-----~~~~~~a~~~~~~~~f~~~~~~~~~~~~~~~i~~~P~l 221 (447)
....+.+..|++.+++++|+..++ +++|+|+++. ..|.++|..+ +.+.|+. ..+.++++.++++. |++
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~~~---~~vvgff~~~~~~~~~~f~~~A~~~-~~~~F~~--t~~~~v~~~~~v~~-~~i 85 (361)
T 3uem_A 13 GPGSEFATTLPDGAAAESLVESSE---VAVIGFFKDVESDSAKQFLQAAEAI-DDIPFGI--TSNSDVFSKYQLDK-DGV 85 (361)
T ss_dssp CCCCSSSEECCSHHHHHHHHHTSS---EEEEEECSCTTSHHHHHHHHHHHHC-SSSCEEE--ECCHHHHHHTTCSS-SEE
T ss_pred CCccccceecCCHHHHHHHHhcCC---cEEEEEEcCCCchHHHHHHHHHhcC-CCceEEE--ECcHHHHHHhCCCC-CeE
Confidence 335678899999999999998765 5888887542 2688889888 4555544 45788999999987 999
Q ss_pred EEEcCCCCCcccccCCCChHHHHHHHHhhCCCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC
Q 013240 222 VALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR 301 (447)
Q Consensus 222 ~~~~~~~~~~~~~~g~~~~~~i~~fI~~~~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~ 301 (447)
++|++.++....|.|+++.+.|.+||..+..|++.+++++++..+...+.+.+++++........+++...++++|++++
T Consensus 86 ~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~ 165 (361)
T 3uem_A 86 VLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFK 165 (361)
T ss_dssp EEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGT
T ss_pred EEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHcc
Confidence 99998777788899999999999999999999999999999999887766554444443455667888999999999998
Q ss_pred C-ceEEEEecc--chHhHHhhcCCCCCCCCceEEEEeCCc---cceecCCCCCCCcccchhHHHHHHHHHhcCccccccc
Q 013240 302 E-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNE---NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKV 375 (447)
Q Consensus 302 ~-~~f~~vd~~--~~~~~~~~~~i~~~~~~P~vvi~~~~~---~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~~~k 375 (447)
+ +.|+++|+. +++.+++.||+ ...+.|++++++.++ +|. +. .+..+.+.|.+|++++++|++++..+
T Consensus 166 ~~i~f~~vd~~~~~~~~~~~~fgi-~~~~~P~~~~~~~~~~~~ky~-~~-----~~~~~~~~l~~fi~~~l~g~~~~~~~ 238 (361)
T 3uem_A 166 GKILFIFIDSDHTDNQRILEFFGL-KKEECPAVRLITLEEEMTKYK-PE-----SEELTAERITEFCHRFLEGKIKPHLM 238 (361)
T ss_dssp TTCEEEEECTTSGGGHHHHHHTTC-CTTTCSEEEEEECC--CCEEC-CS-----SCCCCHHHHHHHHHHHHTTCSCCCCB
T ss_pred CceEEEEecCChHHHHHHHHHcCC-CccCCccEEEEEcCCcccccC-CC-----ccccCHHHHHHHHHHHhcCCCccccc
Confidence 7 999999998 68999999999 556799999999742 332 21 24577899999999999999999999
Q ss_pred cCC--c--ccccceEEeecc
Q 013240 376 AGP--S--IFGFVNSLIGIR 391 (447)
Q Consensus 376 s~p--~--~~~~~~~~v~~~ 391 (447)
|+| + ..+++..+.+.+
T Consensus 239 s~~~p~~~~~~~v~~l~~~~ 258 (361)
T 3uem_A 239 SQELPEDWDKQPVKVLVGKN 258 (361)
T ss_dssp CCCCCTTTTTSSSEEECTTT
T ss_pred CCCCCcccccCCcEEeecCc
Confidence 873 2 235677766554
No 20
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.83 E-value=2.1e-18 Score=167.97 Aligned_cols=298 Identities=14% Similarity=0.182 Sum_probs=224.2
Q ss_pred CCCCeEEe-ChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 41 IDGKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 41 ~~~~v~~l-~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
....+..| +.++++++++.++.++|.|+.+-+..+ ...|.++|+.+.. +.|+ |..++++|+++++.. |
T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~~~----~~F~---~t~~~~v~~~~~v~~-~ 83 (361)
T 3uem_A 15 GSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAIDD----IPFG---ITSNSDVFSKYQLDK-D 83 (361)
T ss_dssp CCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHCSS----SCEE---EECCHHHHHHTTCSS-S
T ss_pred ccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcCCC----ceEE---EECcHHHHHHhCCCC-C
Confidence 34677888 458899999999999999998766554 4789999987732 6676 555799999999998 9
Q ss_pred EEEEEeC--CeeEEecCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCC-h-------hHHHHH
Q 013240 120 TLKIFMH--GIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E-------SVMSNL 189 (447)
Q Consensus 120 tl~~~~~--g~~~~y~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~-------~~~~~~ 189 (447)
++++|+. +....|.|..+.++|.+|+.....|.+.+++.+ ++..+...... ++++.|+.. + +.+.++
T Consensus 84 ~i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~-~~~~~~~~~~~--~~~v~F~~~~~~~~~~~~~~~~~~ 160 (361)
T 3uem_A 84 GVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQ-TAPKIFGGEIK--THILLFLPKSVSDYDGKLSNFKTA 160 (361)
T ss_dssp EEEEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTT-THHHHHSCSCC--EEEEEECCSSSSSHHHHHHHHHHH
T ss_pred eEEEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCcc-cHHHHhcCCCC--cEEEEEEeCCchhHHHHHHHHHHH
Confidence 9999987 567889999999999999999999999999755 57777655432 456666532 2 257888
Q ss_pred HHHhhhhhHhHHhhc---cchhhhhhcCCCC--CCeEEEEcCCCCCccccc---CCCChHHHHHHHHhhCC---------
Q 013240 190 ALKYKKKAWFAVAKD---FSEDTMVLYDFDK--VPALVALQPSYNEHNIFY---GPFDEEFLEEFIKQNFL--------- 252 (447)
Q Consensus 190 a~~~~~~~~f~~~~~---~~~~~~~~~~i~~--~P~l~~~~~~~~~~~~~~---g~~~~~~i~~fI~~~~~--------- 252 (447)
|..|++...|+.+.. ....++..|++.. .|+++++..+.. ...|. |.++.+.|.+|+....-
T Consensus 161 A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s 239 (361)
T 3uem_A 161 AESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRFLEGKIKPHLMS 239 (361)
T ss_dssp HGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBC
T ss_pred HHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHHhcCCCcccccC
Confidence 999988766665532 2567889999987 899999987432 23343 78999999999987521
Q ss_pred ---------CCccccChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC---ceEEEEeccchHhHHhh
Q 013240 253 ---------PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFADT 319 (447)
Q Consensus 253 ---------p~~~~l~~~~~~~~~-~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~---~~f~~vd~~~~~~~~~~ 319 (447)
..+..++..++..+. ..++++++.|+. .....-..+...+.++|..+++ +.|+.+|+.... ++.
T Consensus 240 ~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a-~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~ 316 (361)
T 3uem_A 240 QELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYA-PWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEA 316 (361)
T ss_dssp CCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSS
T ss_pred CCCCcccccCCcEEeecCchhhhcccCCCcEEEEEec-CcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhh
Confidence 125567888888765 456677776765 4666667888899999998875 899999997655 677
Q ss_pred cCCCCCCCCceEEEEeCC-c-cceecCCCCCCCcccchhHHHHHHHHH
Q 013240 320 FEANKKSKLPKMVVWDGN-E-NYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 320 ~~i~~~~~~P~vvi~~~~-~-~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
+++ ..+|+++++..+ + ....+. +..+.+.+.+||+.-
T Consensus 317 ~~v---~~~Pt~~~~~~~~~~~~~~~~------G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 317 VKV---HSFPTLKFFPASADRTVIDYN------GERTLDGFKKFLESG 355 (361)
T ss_dssp CCC---CSSSEEEEECSSSSCCCEECC------SCSSHHHHHHHHTTT
T ss_pred cCC---cccCeEEEEECCCCcceeEec------CCCCHHHHHHHHHhc
Confidence 888 789999999654 2 333343 345677899998754
No 21
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.83 E-value=4e-20 Score=148.06 Aligned_cols=106 Identities=35% Similarity=0.595 Sum_probs=96.3
Q ss_pred CCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
.+.+..+|+++|++.+. +++++|.||++||++|+.+.|.|.++++.+......+.++.|||+.++++|++|+|.++|++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 46899999999999998 78999999999999999999999999987654435699999999999999999999999999
Q ss_pred EEEeCCeeE-EecCCCCHHHHHHHHHHh
Q 013240 122 KIFMHGIPT-EYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~fi~~~ 148 (447)
++|++|+.+ .|.|.++.+.|.+|+.++
T Consensus 83 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 999999876 599999999999999875
No 22
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.83 E-value=7.1e-20 Score=146.67 Aligned_cols=106 Identities=18% Similarity=0.278 Sum_probs=97.8
Q ss_pred CCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 42 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
...+..+++++|++.+ +++++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.|||+.++++|++|+|.++|+
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 79 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE---SFGFYYVDVEEEKTLFQRFSLKGVPQ 79 (111)
T ss_dssp CCCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSCE
T ss_pred CCcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC---ceEEEEEECCcChhHHHhcCCCcCCE
Confidence 3578999999999999 7889999999999999999999999999988754 49999999999999999999999999
Q ss_pred EEEEeCCeeE-EecCCCCHHHHHHHHHHhcC
Q 013240 121 LKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 121 l~~~~~g~~~-~y~g~~~~~~i~~fi~~~~~ 150 (447)
+++|++|+.+ .|.|.++.+.|.+|+.++++
T Consensus 80 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 80 ILYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 9999999877 48999999999999988753
No 23
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=7.9e-20 Score=150.14 Aligned_cols=112 Identities=26% Similarity=0.503 Sum_probs=101.1
Q ss_pred CCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
.+.|..|++++|++++++ .++|.||++||++|+.+.|.|.++++.+.+. ++.|+.|||++++++|++|+|.++||+
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDL--EVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccC--CeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 478999999999998864 3999999999999999999999999987642 399999999999999999999999999
Q ss_pred EEEeCCeeEEecCCCCHHHHHHHHHHhcCCCceecC
Q 013240 122 KIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILN 157 (447)
Q Consensus 122 ~~~~~g~~~~y~g~~~~~~i~~fi~~~~~~~v~~i~ 157 (447)
++|++|+...|.|.++.+.|.+|+.+.+.+.+..+.
T Consensus 82 ~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 117 (126)
T 1x5e_A 82 YHCKDGEFRRYQGPRTKKDFINFISDKEWKSIEPVS 117 (126)
T ss_dssp EEEETTEEEECCSCCCHHHHHHHHHTCGGGGSCEEC
T ss_pred EEEeCCeEEEeecCCCHHHHHHHHHHHhhccCCCch
Confidence 999999977799999999999999999877666553
No 24
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.82 E-value=1.1e-19 Score=144.80 Aligned_cols=105 Identities=26% Similarity=0.502 Sum_probs=97.8
Q ss_pred CCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
++.+..+++++|+++++++++++|+||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++|++|+|.++|++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 79 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG---KAVFGRLNVDENQKIADKYSVLNIPTT 79 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC---CceEEEEccccCHHHHHhcCcccCCEE
Confidence 46889999999999998899999999999999999999999999998754 499999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++|.+|+.+. |.|..+.+.|.+|+++++
T Consensus 80 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 80 LIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999998765 899999999999998875
No 25
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.82 E-value=1.2e-19 Score=145.80 Aligned_cols=105 Identities=29% Similarity=0.514 Sum_probs=97.2
Q ss_pred CeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEE
Q 013240 44 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (447)
Q Consensus 44 ~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~ 123 (447)
.++.|++++|++.+ ++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++|++|+|.++|++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 77 (112)
T 2voc_A 2 AIVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD---KLKIVKIDVDENQETAGKYGVMSIPTLLV 77 (112)
T ss_dssp CCEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT---TCEEEEEETTTCCSHHHHTTCCSBSEEEE
T ss_pred CeEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 47889999999999 889999999999999999999999999998764 39999999999999999999999999999
Q ss_pred EeCCeeEE-ecCCCCHHHHHHHHHHhcCCC
Q 013240 124 FMHGIPTE-YYGPRKAELLVRYLKKFVAPD 152 (447)
Q Consensus 124 ~~~g~~~~-y~g~~~~~~i~~fi~~~~~~~ 152 (447)
|.+|+.+. +.|..+.+++.+|+.+.+.+.
T Consensus 78 ~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 78 LKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 99998764 899999999999999988765
No 26
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.82 E-value=1.3e-19 Score=165.09 Aligned_cols=191 Identities=13% Similarity=0.059 Sum_probs=140.3
Q ss_pred hhHHHhH--ccCCeEEEEEE-----CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEE
Q 013240 51 SNFDSAI--SSFDYILVDFY-----APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (447)
Q Consensus 51 ~~f~~~~--~~~~~~lV~f~-----~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~ 123 (447)
+.+.+++ +..++++|.|| +|||+||+.+.|+|.+++..+.+ .++|.++.|||+.++++|++|+|+++||+++
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~-~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 87 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVG-QDKIKLDIYSPFTHKEETEKYGVDRVPTIVI 87 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHC-TTTEEEEEECTTTCHHHHHHTTCCBSSEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCC-CCceEEEEecCcccHHHHHHcCCCcCcEEEE
Confidence 4566666 44567777777 89999999999999999988854 3469999999999999999999999999999
Q ss_pred EeCCe-eEEecCCCCHHHHHHHHHHhcC--CCceecCChhHHHHHHHhcCCcccEEEeecCC-hh-------HHHHHHHH
Q 013240 124 FMHGI-PTEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-ES-------VMSNLALK 192 (447)
Q Consensus 124 ~~~g~-~~~y~g~~~~~~i~~fi~~~~~--~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~~-------~~~~~a~~ 192 (447)
|++|. ...|.|.++.+++..|+...+. ..+..++ .+.++.++.... .++++.|+.. +. .+..++..
T Consensus 88 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~--~~~~v~F~a~wC~~C~~~~~~~~~~~~~ 164 (229)
T 2ywm_A 88 EGDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLS-EKTLELLQVVDI--PIEIWVFVTTSCGYCPSAAVMAWDFALA 164 (229)
T ss_dssp ESSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCC-HHHHHHHTTCCS--CEEEEEEECTTCTTHHHHHHHHHHHHHH
T ss_pred ECCCcccceecCCccHHHHHHHHHHHHhccCCccCCC-HHHHHHHHhcCC--CeEEEEEECCCCcchHHHHHHHHHHHHH
Confidence 98764 5679999999999999988753 4455554 456766653322 2336656543 22 45556666
Q ss_pred hhhhhHhHHh-hccchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCChHHHHHHHHhh
Q 013240 193 YKKKAWFAVA-KDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 250 (447)
Q Consensus 193 ~~~~~~f~~~-~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~~~~~~i~~fI~~~ 250 (447)
+. ...+..+ .+...++..+|++.++|++++ . +....+.|..+.+.|.+||.+.
T Consensus 165 ~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~--G~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 165 ND-YITSKVIDASENQDLAEQFQVVGVPKIVI--N--KGVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp CT-TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--G--GGTEEEESCCCHHHHHHHHHHH
T ss_pred CC-CeEEEEEECCCCHHHHHHcCCcccCEEEE--C--CEEEEeeCCCCHHHHHHHHHHH
Confidence 52 2222222 234567899999999999988 2 2344488999999999999765
No 27
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.81 E-value=3.6e-19 Score=141.83 Aligned_cols=104 Identities=35% Similarity=0.585 Sum_probs=95.0
Q ss_pred CCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
+.|..+++++|++.+ +++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++|++|+|.++|++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGIPTL 78 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCTTHHHHTTCCSSSEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCcccCEE
Confidence 578999999999765 6779999999999999999999999999988754 499999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++|++|+.+. +.|..+.+.|.+|+.+.+
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 79 LLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 9999998765 899999999999998865
No 28
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.81 E-value=2.8e-19 Score=141.86 Aligned_cols=103 Identities=34% Similarity=0.537 Sum_probs=95.1
Q ss_pred CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
..+..+++++|++.+ ++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++.++++|++|+|.++|+++
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEG---KADILKLDVDENPSTAAKYEVMSIPTLI 78 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CcEEEEEECCcCHHHHHhCCCcccCEEE
Confidence 468999999999999 789999999999999999999999999998754 3999999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+|++|+.+. +.|.++.++|.+|+.+++
T Consensus 79 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 79 VFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 999998764 899999999999998753
No 29
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.81 E-value=2.8e-19 Score=142.43 Aligned_cols=106 Identities=30% Similarity=0.601 Sum_probs=96.2
Q ss_pred CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
+.|..|++++|+++++++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.|||+.++++|++|+|.++|+++
T Consensus 1 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 77 (109)
T 2yzu_A 1 AKPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG---KLLVAKLDVDENPKTAMRYRVMSIPTVI 77 (109)
T ss_dssp -CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC---ceEEEEEECCCCHhHHHhCCCCcCCEEE
Confidence 3688999999999998889999999999999999999999999988754 4999999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+|.+|+.+. +.|..+.+++.+|+.+.++.
T Consensus 78 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 78 LFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 999998765 89999999999999988754
No 30
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.81 E-value=2.5e-19 Score=141.97 Aligned_cols=103 Identities=34% Similarity=0.589 Sum_probs=94.2
Q ss_pred CeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEE
Q 013240 44 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (447)
Q Consensus 44 ~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~ 123 (447)
.|..+++++|+++++++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++|++|+|.++|++++
T Consensus 1 av~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 77 (105)
T 1nsw_A 1 ATMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD---KVTVAKLNVDENPETTSQFGIMSIPTLIL 77 (105)
T ss_dssp CCEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CcEEEEEECcCCHHHHHHcCCccccEEEE
Confidence 378899999998888889999999999999999999999999987754 39999999999999999999999999999
Q ss_pred EeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 124 FMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 124 ~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
|.+|+... +.|..+.+.+.+|+.+.+
T Consensus 78 ~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 78 FKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 99998765 899999999999988764
No 31
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=3.2e-19 Score=147.82 Aligned_cols=109 Identities=40% Similarity=0.696 Sum_probs=97.8
Q ss_pred CCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhc-CCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 42 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAK-LKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~-~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
.+.+..|++++|++.+ +.+++++|.||++||++|+.+.|.|.++++.+.. ....+.|+.|||+.++++|++|+|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 4789999999999977 6778999999999999999999999999998862 1134999999999999999999999999
Q ss_pred EEEEEeCCeeE-EecCCCCHHHHHHHHHHhcC
Q 013240 120 TLKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 120 tl~~~~~g~~~-~y~g~~~~~~i~~fi~~~~~ 150 (447)
++++|.+|+.. .|.|.++.+.|.+|+.+++.
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 99999999755 59999999999999988764
No 32
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=1.8e-19 Score=148.74 Aligned_cols=113 Identities=37% Similarity=0.660 Sum_probs=100.2
Q ss_pred ccccccCCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhC
Q 013240 35 EETKFKIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQ 113 (447)
Q Consensus 35 ~~~~~~~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~ 113 (447)
....+..++.+..|++++|++.+ +++++++|.||++||++|+.+.|.|.++++.+.+ .+.|+.|||+.++++|++|
T Consensus 9 ~~~l~~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~ 85 (130)
T 2dml_A 9 VSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD---VVKVGAVNADKHQSLGGQY 85 (130)
T ss_dssp CCCSSCTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHH
T ss_pred cccccCCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC---ceEEEEEeCCCCHHHHHHc
Confidence 33456667899999999999965 6778999999999999999999999999988754 3999999999999999999
Q ss_pred CCccccEEEEEeCCe--eEEecCCCCHHHHHHHHHHhcC
Q 013240 114 EIDAFPTLKIFMHGI--PTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 114 ~i~~~Ptl~~~~~g~--~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
+|.++||+++|.+|. ...|.|.++.+.+.+|+.+.+.
T Consensus 86 ~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 86 GVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp TCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 999999999998865 5569999999999999988753
No 33
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.81 E-value=2.6e-19 Score=162.64 Aligned_cols=192 Identities=17% Similarity=0.203 Sum_probs=141.7
Q ss_pred hhHHHhH---ccCCeEEEEEECC-CChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc--chhhhhhCCCccccEEEEE
Q 013240 51 SNFDSAI---SSFDYILVDFYAP-WCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--YSRLASKQEIDAFPTLKIF 124 (447)
Q Consensus 51 ~~f~~~~---~~~~~~lV~f~~~-~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~--~~~l~~~~~i~~~Ptl~~~ 124 (447)
+.+.+.+ .+++.++|.||++ ||++|+.+.|.|+++++. .+++.++.|||++ ++++|++|+|.++||+++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~----~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL----TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTIT 85 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT----CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh----CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEE
Confidence 4566666 2346778999999 999999999999999853 2359999999999 9999999999999999999
Q ss_pred eCCee--EEecCCCCHHHHHHHHHHhcC--CCceecCChhHHHHHHHhcCCcccEEEeecCC-h-------hHHHHHHHH
Q 013240 125 MHGIP--TEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E-------SVMSNLALK 192 (447)
Q Consensus 125 ~~g~~--~~y~g~~~~~~i~~fi~~~~~--~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~-------~~~~~~a~~ 192 (447)
++|+. ..|.|.+..+.+.+|+...+. .....+ +.+.++.+..... .++++.|+.. + +.+..++..
T Consensus 86 ~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~--~~~~v~F~a~wC~~C~~~~p~~~~l~~~ 162 (226)
T 1a8l_A 86 QDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQ--DVRILVFVTPTCPYCPLAVRMAHKFAIE 162 (226)
T ss_dssp ETTBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCS--CEEEEEEECSSCTTHHHHHHHHHHHHHH
T ss_pred cCCceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCC--CcEEEEEeCCCCCccHHHHHHHHHHHHh
Confidence 99864 579999999999999988653 233344 3445555433222 2336666643 2 256667777
Q ss_pred hh----hhhHhHHh-hccchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCChHHHHHHHHhh
Q 013240 193 YK----KKAWFAVA-KDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 250 (447)
Q Consensus 193 ~~----~~~~f~~~-~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~~~~~~i~~fI~~~ 250 (447)
+. +...+..+ .+...++..+|++.++|++++++.+ +....+.|..+.+.|.+||.+.
T Consensus 163 ~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 163 NTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred cccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHh
Confidence 76 23333222 2345678899999999999999743 4455688999999999999864
No 34
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.81 E-value=1.3e-19 Score=162.72 Aligned_cols=118 Identities=31% Similarity=0.557 Sum_probs=106.9
Q ss_pred cccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc
Q 013240 38 KFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 38 ~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
.+..+..+..+++++|+..+.++++++|.||++||++|+.+.|.|.++++.+.+ .+.|+.|||+.++++|++|+|.+
T Consensus 92 ~~~~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~ 168 (210)
T 3apq_A 92 IYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG---LLRIGAVNCGDDRMLCRMKGVNS 168 (210)
T ss_dssp TTTTCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCCS
T ss_pred ccCCCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC---ceEEEEEECCccHHHHHHcCCCc
Confidence 345667899999999999998889999999999999999999999999998754 39999999999999999999999
Q ss_pred ccEEEEEeCCeeE-EecCCCCHHHHHHHHHHhcCCCceecCC
Q 013240 118 FPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNS 158 (447)
Q Consensus 118 ~Ptl~~~~~g~~~-~y~g~~~~~~i~~fi~~~~~~~v~~i~s 158 (447)
+||+++|.+|+.+ .|.|.++.+.|.+|+.+.+.+.+.+|++
T Consensus 169 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 169 YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp SSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred CCeEEEEECCCceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 9999999999754 5999999999999999999999888763
No 35
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.81 E-value=5e-19 Score=150.79 Aligned_cols=108 Identities=33% Similarity=0.597 Sum_probs=99.4
Q ss_pred CCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 41 IDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 41 ~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
..+.+..+++.+|++.++++++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.||+++++++|++|+|+++||
T Consensus 45 ~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~---~v~~~~vd~~~~~~l~~~~~i~~~Pt 121 (155)
T 2ppt_A 45 ITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG---QVRLAKIDTQAHPAVAGRHRIQGIPA 121 (155)
T ss_dssp CCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTSTHHHHHTTCCSSSE
T ss_pred cCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC---CEEEEEEeCCccHHHHHHcCCCcCCE
Confidence 467899999999999997789999999999999999999999999998864 39999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+++|.+|+.+. |.|..+.+.|.+|+.+.+..
T Consensus 122 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 122 FILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 99999998765 89999999999999998764
No 36
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.81 E-value=1.9e-19 Score=147.11 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=94.6
Q ss_pred CCeEEeChhhHHHhHccCC-eEEEEEECCCC--hhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 43 GKVIELDESNFDSAISSFD-YILVDFYAPWC--GHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~-~~lV~f~~~~C--~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
.....+|+++|++.+.+.+ +++|+||++|| ++|+.+.|.++++++++.+ ++.|++||.+++++++.+|+|++.|
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~---~v~~~KVdvDe~~~la~~ygV~siP 91 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG---RLVAAEVAAEAERGLMARFGVAVCP 91 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT---TEEEEEECGGGHHHHHHHHTCCSSS
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC---CcEEEEEECCCCHHHHHHcCCccCC
Confidence 4566999999999996666 99999999999 9999999999999988754 4999999999999999999999999
Q ss_pred EEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 120 TLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 120 tl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
|+++|++|+.+. ..|.+..+.|.+++.+++
T Consensus 92 TlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 92 SLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999999999886 899999999999998876
No 37
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.81 E-value=6.8e-19 Score=139.83 Aligned_cols=103 Identities=26% Similarity=0.532 Sum_probs=94.8
Q ss_pred CCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
+.|..+++++|++.+ +++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.|||+.++++|++|+|.++|++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG---KVTVAKVNIDDNPETPNAYQVRSIPTL 78 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT---SEEEEEEETTTCCHHHHHTTCCSSSEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC---cEEEEEEECCCCHHHHHhcCCCccCEE
Confidence 579999999999876 6779999999999999999999999999998764 499999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHHh
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKKF 148 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~~ 148 (447)
++|.+|+... +.|..+.+.+.+|++++
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999998775 89999999999999875
No 38
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.80 E-value=4.5e-19 Score=148.50 Aligned_cols=106 Identities=25% Similarity=0.459 Sum_probs=97.6
Q ss_pred CCCeEEeChhhHH-HhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 42 DGKVIELDESNFD-SAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 42 ~~~v~~l~~~~f~-~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
.+.+..+++++|. .+++++++++|+||++||++|+.+.|.|.++++.+.+ ++.|+.|||++++++|++|+|.++||
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 81 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS---SAVFGRINIATNPWTAEKYGVQGTPT 81 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TSEEEEEETTTCHHHHHHHTCCEESE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC---ceEEEEEECCcCHhHHHHCCCCcCCE
Confidence 4689999999999 5667789999999999999999999999999998865 39999999999999999999999999
Q ss_pred EEEEeCCeeE-EecCCCCHHHHHHHHHHhcC
Q 013240 121 LKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 121 l~~~~~g~~~-~y~g~~~~~~i~~fi~~~~~ 150 (447)
+++|++|+.+ .|.|.++.+.|.+|+.+.+.
T Consensus 82 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 82 FKFFCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 9999999877 49999999999999998864
No 39
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.80 E-value=5.7e-19 Score=139.27 Aligned_cols=102 Identities=31% Similarity=0.589 Sum_probs=94.5
Q ss_pred eEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEE
Q 013240 45 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF 124 (447)
Q Consensus 45 v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~ 124 (447)
|..+|+++|++.++++++++|.||++||++|+.+.|.+.++++.+.+ +.++.|||+.++++|++|++.++|++++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 57899999999998889999999999999999999999999987643 99999999999999999999999999999
Q ss_pred eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 125 MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 125 ~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
++|+.+. |.|..+.+.+.+|+.+.++
T Consensus 77 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9998764 8999999999999998764
No 40
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.80 E-value=5.4e-19 Score=145.58 Aligned_cols=107 Identities=33% Similarity=0.529 Sum_probs=95.9
Q ss_pred cCCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccc
Q 013240 40 KIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 40 ~~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
...+.|..|++++|++.+ +++++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.|||+.++++|++|+|.++
T Consensus 19 ~m~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~ 95 (128)
T 2o8v_B 19 SHSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGI 95 (128)
T ss_dssp --CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT---TEEEEEEETTTCCTTSGGGTCCSS
T ss_pred ccccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCcc
Confidence 345679999999999765 6789999999999999999999999999988754 399999999999999999999999
Q ss_pred cEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 119 Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
|++++|.+|+.+. +.|..+.+.|.+|+++.+
T Consensus 96 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 96 PTLLLFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CEEEEEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9999999998765 899999999999998865
No 41
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.80 E-value=1.2e-19 Score=148.77 Aligned_cols=108 Identities=14% Similarity=0.113 Sum_probs=96.9
Q ss_pred CeEEeChhhHHHhHccCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhhcCCCC-eEEEEEeCccchhhhhhCCCccccE
Q 013240 44 KVIELDESNFDSAISSFDYILVDFYAPW--CGHCKRLAPQLDEAAPILAKLKEP-IVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 44 ~v~~l~~~~f~~~~~~~~~~lV~f~~~~--C~~C~~~~p~~~~~a~~l~~~~~~-v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
.+..+|+++|++.+.++++++|.||++| |++|+.+.|.++++++++. ++ +.|++||.+++++++.+|+|++.||
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~---g~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP---DYTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT---TSCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC---CCeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 6779999999999987889999999999 9999999999999998764 35 9999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCCCce
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFVAPDVS 154 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~~v~ 154 (447)
+++|++|+.+. ..|....+.|.+|+++++..+..
T Consensus 95 lilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 95 TLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQE 129 (140)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC----
T ss_pred EEEEECCEEEEEEecCCCHHHHHHHHHHHhcCCCC
Confidence 99999999886 89999999999999988865444
No 42
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.80 E-value=7.6e-19 Score=146.32 Aligned_cols=107 Identities=36% Similarity=0.577 Sum_probs=98.0
Q ss_pred CCCeEEeChhhHHHhHc------------cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhh
Q 013240 42 DGKVIELDESNFDSAIS------------SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRL 109 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~------------~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l 109 (447)
...|+.|++++|.+.+. ++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l 84 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG---QIVIYKVDTEKEQEL 84 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CEEEEEEeCCCCHHH
Confidence 46899999999999885 468999999999999999999999999988754 399999999999999
Q ss_pred hhhCCCccccEEEEE-eCCeeEEecCCCCHHHHHHHHHHhcCC
Q 013240 110 ASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 110 ~~~~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~i~~fi~~~~~~ 151 (447)
|++|+|.++|++++| .+|+.+.|.|..+.+.|.+|+.+....
T Consensus 85 ~~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 85 AGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HHHTTCCSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHcCCCCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhc
Confidence 999999999999999 789888899999999999999988764
No 43
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.80 E-value=2.6e-19 Score=144.79 Aligned_cols=102 Identities=25% Similarity=0.479 Sum_probs=92.6
Q ss_pred CCeEEeChhhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 43 GKVIELDESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
......+.++|+++++ ++++++|.||++||++|+.+.|.|.++++.+.+ +.|+.|||++++++|++|+|.++|+
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASECEVKSMPT 87 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT----SEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCccccE
Confidence 4667778999999997 789999999999999999999999999987643 9999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+++|++|+.+. +.|. +.+.|.+++++++
T Consensus 88 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 88 FQFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 99999997765 8888 9999999998763
No 44
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.80 E-value=4.4e-19 Score=152.37 Aligned_cols=113 Identities=13% Similarity=0.228 Sum_probs=97.8
Q ss_pred CCCeEEeChhhHHHhHcc--CCeEEEEEEC-------CCChhhhhhhHHHHHHHHHhhcCC--CCeEEEEEeCccchhhh
Q 013240 42 DGKVIELDESNFDSAISS--FDYILVDFYA-------PWCGHCKRLAPQLDEAAPILAKLK--EPIVIAKVDADKYSRLA 110 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~--~~~~lV~f~~-------~~C~~C~~~~p~~~~~a~~l~~~~--~~v~~~~Vd~~~~~~l~ 110 (447)
.+.|+.||++||++++.. +.+++|+||| +||++|+.+.|+|+++|+++.+.. +++.|++||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 468999999999998854 4589999999 499999999999999999986211 35999999999999999
Q ss_pred hhCCCccccEEEEEeCCee-------------EEe---cC-CCCHHHHHHHHHHhcCCCce
Q 013240 111 SKQEIDAFPTLKIFMHGIP-------------TEY---YG-PRKAELLVRYLKKFVAPDVS 154 (447)
Q Consensus 111 ~~~~i~~~Ptl~~~~~g~~-------------~~y---~g-~~~~~~i~~fi~~~~~~~v~ 154 (447)
++|||+++|||++|++|.. ..| .| +++++.|.+|+.+.++..+.
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~ 157 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISIT 157 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcc
Confidence 9999999999999998741 345 35 89999999999999987664
No 45
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.80 E-value=7.1e-19 Score=148.74 Aligned_cols=108 Identities=25% Similarity=0.518 Sum_probs=100.1
Q ss_pred CCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 41 IDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 41 ~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
.++.+..++.++|++.+.++++++|+||++||++|+.+.|.|.++++.+.+ ++.|+.||++.+++++++|+|.++||
T Consensus 36 ~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt 112 (148)
T 3p2a_A 36 FDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG---KVRFVKVNTEAEPALSTRFRIRSIPT 112 (148)
T ss_dssp TCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC---ceEEEEEECcCCHHHHHHCCCCccCE
Confidence 467899999999999998889999999999999999999999999988754 49999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+++|++|+.+. |.|.++.+.|.+|+.+++..
T Consensus 113 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 113 IMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999998775 99999999999999988754
No 46
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.80 E-value=4.5e-19 Score=148.57 Aligned_cols=109 Identities=36% Similarity=0.530 Sum_probs=95.8
Q ss_pred ccCCCCeEEeChhhHHHhHcc------------CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 013240 39 FKIDGKVIELDESNFDSAISS------------FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~------------~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~ 106 (447)
....+.+..|++++|...+.. +++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.+
T Consensus 18 ~~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~ 94 (141)
T 3hxs_A 18 EKPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG---KIYIYKVNVDKE 94 (141)
T ss_dssp -----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEETTTC
T ss_pred cCCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC---ceEEEEEECCCC
Confidence 344678999999999998854 78999999999999999999999999998764 499999999999
Q ss_pred hhhhhhCCCccccEEEEE-eCCeeEEecCCCCHHHHHHHHHHhcC
Q 013240 107 SRLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 107 ~~l~~~~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
+++|++|+|.++|++++| .+|+...|.|.++.+.|.+|+.+++.
T Consensus 95 ~~~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 95 PELARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHHHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999999999999 56777789999999999999998764
No 47
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.79 E-value=6e-19 Score=146.23 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=89.2
Q ss_pred eEEeC-hhhHHHhH--ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 45 VIELD-ESNFDSAI--SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 45 v~~l~-~~~f~~~~--~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
+..|+ .++|++.+ +++++++|.|||+||++|+.+.|.++++|+++.+ ++.|++||.+++++++++|+|.+.||+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~---~v~f~kVDVDe~~e~a~~y~V~siPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN---FCVIYLVDITEVPDFNTMYELYDPVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTCCTTTTTTTCCSSEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC---CcEEEEEECCCCHHHHHHcCCCCCCEE
Confidence 66674 58999887 3678999999999999999999999999998754 399999999999999999999999999
Q ss_pred EEEeCCeeE----------EecCCCC-HHHHHHHHHHhc
Q 013240 122 KIFMHGIPT----------EYYGPRK-AELLVRYLKKFV 149 (447)
Q Consensus 122 ~~~~~g~~~----------~y~g~~~-~~~i~~fi~~~~ 149 (447)
++|.+|+.+ ...|... .+.|.++++..+
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999999887 4678776 888888876654
No 48
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.79 E-value=1.3e-18 Score=140.01 Aligned_cols=107 Identities=21% Similarity=0.468 Sum_probs=97.0
Q ss_pred CCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 42 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
.+.|..+++++|++.+ +.+++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++|++|+|.++|+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD---RLKVVKLEIDPNPTTVKKYKVEGVPA 82 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEESTTCHHHHHHTTCCSSSE
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC---cEEEEEEEcCCCHHHHHHcCCCceeE
Confidence 3679999999999876 6779999999999999999999999999988754 39999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+++|++|+... +.|.++.+.+.+|+.+++..
T Consensus 83 ~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 83 LRLVKGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEcCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 99999998775 89999999999999988653
No 49
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.79 E-value=1.2e-18 Score=139.76 Aligned_cols=106 Identities=29% Similarity=0.605 Sum_probs=95.8
Q ss_pred CCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 42 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
.+.|..+++++|.+.+ +++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++.++++|++|+|.++||
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt 80 (112)
T 1t00_A 4 AGTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD---KIEIVKLNIDENPGTAAKYGVMSIPT 80 (112)
T ss_dssp SCCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC---CeEEEEEEcCCCHHHHHhCCCCcccE
Confidence 4678999999998766 6678999999999999999999999999988754 39999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
+++|++|+... +.|..+.+.+.+|+.+.+.
T Consensus 81 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 81 LNVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999998765 8999999999999988764
No 50
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.79 E-value=1e-18 Score=142.02 Aligned_cols=107 Identities=31% Similarity=0.527 Sum_probs=96.7
Q ss_pred cCCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccc
Q 013240 40 KIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 40 ~~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
...+.+..+++++|++.+ +.+++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++|++|+|.++
T Consensus 10 ~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~ 86 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG---KVVMAKVDIDDHTDLAIEYEVSAV 86 (119)
T ss_dssp CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---SSEEEEEETTTTHHHHHHTTCCSS
T ss_pred CCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCHHHHHHcCCCcc
Confidence 445789999999999866 6678999999999999999999999999987754 499999999999999999999999
Q ss_pred cEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 119 Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
|++++|++|+.+. |.|.++.+.|.+|+++.+
T Consensus 87 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 87 PTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9999999998764 899999999999998875
No 51
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.79 E-value=2e-19 Score=142.76 Aligned_cols=97 Identities=14% Similarity=0.155 Sum_probs=78.2
Q ss_pred ChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeCCe
Q 013240 49 DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGI 128 (447)
Q Consensus 49 ~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~g~ 128 (447)
+.++|+++++++++++|.||++||++|+.+.|.|.++++.+. ++.++.||++.++++|++|+|.++||+++|++|+
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 457788888888999999999999999999999999998763 3999999999999999999999999999999998
Q ss_pred eEE-ecCCCCHHHHHHHHHHhc
Q 013240 129 PTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 129 ~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
.+. +.|..+.+.|.+++++++
T Consensus 83 ~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEEeCCcCHHHHHHHHHHhh
Confidence 765 899999999999998764
No 52
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.79 E-value=8.7e-19 Score=160.63 Aligned_cols=112 Identities=43% Similarity=0.783 Sum_probs=105.2
Q ss_pred CCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
...+..++.++|++.++++++++|.||++||++|+.+.|.|.++++.+.+....+.++.|||+.++++|++|+|.++||+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 208 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208 (241)
T ss_dssp CCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEE
Confidence 45789999999999998889999999999999999999999999999987666799999999999999999999999999
Q ss_pred EEEeCCeeEEecCCCCHHHHHHHHHHhcCCCc
Q 013240 122 KIFMHGIPTEYYGPRKAELLVRYLKKFVAPDV 153 (447)
Q Consensus 122 ~~~~~g~~~~y~g~~~~~~i~~fi~~~~~~~v 153 (447)
++|++|+.+.|.|.++.++|.+|+.+++.+.+
T Consensus 209 ~~~~~g~~~~~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 209 KIFRKGRPYDYNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEEETTEEEECCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEEECCeEEEecCCCCHHHHHHHHHhhhCCCC
Confidence 99999999999999999999999999988764
No 53
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.78 E-value=1.9e-18 Score=137.98 Aligned_cols=102 Identities=30% Similarity=0.520 Sum_probs=92.0
Q ss_pred CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
+.....+.++|+++++++++++|.||++||++|+.+.|.|.++++.+.+ +.|+.||++.++++|++|+|.++|+++
T Consensus 7 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~----~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 82 (109)
T 3f3q_A 7 MVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ----ADFYKLDVDELGDVAQKNEVSAMPTLL 82 (109)
T ss_dssp CCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 4566678899999999999999999999999999999999999987743 899999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+|++|+.+. +.|. +.+.|.+++++++
T Consensus 83 ~~~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 83 LFKNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 999998775 7888 7799999998753
No 54
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.78 E-value=2.5e-18 Score=136.75 Aligned_cols=101 Identities=24% Similarity=0.429 Sum_probs=88.7
Q ss_pred CeEEe-ChhhHHHhH--ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 44 KVIEL-DESNFDSAI--SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 44 ~v~~l-~~~~f~~~~--~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
.+..+ +.++|++.+ +++++++|.||++||++|+.+.|.|.++++.+. ++.|+.||+++++++|++|+|.++||
T Consensus 2 ~v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt 77 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQCQGTAATNNISATPT 77 (107)
T ss_dssp CEEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred ceEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHhcCCCcccE
Confidence 35666 568999999 568999999999999999999999999998772 39999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+++|++|+.+. +.|. ..++|.+|+.+++
T Consensus 78 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 78 FQFFRNKVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred EEEEECCeEEEEEeCC-CHHHHHHHHHHhc
Confidence 99999998775 7885 4566999998865
No 55
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.78 E-value=1.3e-18 Score=142.51 Aligned_cols=101 Identities=27% Similarity=0.425 Sum_probs=93.0
Q ss_pred eEEeCh-hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEE
Q 013240 45 VIELDE-SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (447)
Q Consensus 45 v~~l~~-~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~ 123 (447)
+..|++ ++|+++++++++++|.||++||++|+.+.|.|.++++.+. .+.|+.|||+.++++|++|+|.++||+++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 899999 9999999888999999999999999999999999998763 39999999999999999999999999999
Q ss_pred EeCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 124 FMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 124 ~~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
|.+|+.+. +.| .+.+.|.+++.+++.
T Consensus 97 ~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 ARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99998775 788 688999999988754
No 56
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.78 E-value=1.6e-18 Score=137.81 Aligned_cols=103 Identities=29% Similarity=0.572 Sum_probs=93.6
Q ss_pred CeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 44 KVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 44 ~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
.|..+++++|++.+ +++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++.++++|++|+|.++|+++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD---KLKCVKLNTDESPNVASEYGIRSIPTIM 78 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHHTCCSSCEEE
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC---ceEEEEEECCCCHHHHHHCCCCcCCEEE
Confidence 47889999999976 6678999999999999999999999999988754 3999999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+|++|+... +.|..+.+.+.+++++++
T Consensus 79 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999897764 899999999999998865
No 57
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.78 E-value=2e-18 Score=138.33 Aligned_cols=103 Identities=23% Similarity=0.446 Sum_probs=92.5
Q ss_pred CCCeEEeChhhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-cchhhhhhCCCccc
Q 013240 42 DGKVIELDESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-KYSRLASKQEIDAF 118 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-~~~~l~~~~~i~~~ 118 (447)
.+.|..|++++|++.+. ++++++|.||++||++|+.+.|.|.++++.+.+ +.++.|||+ .++++|++|+|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~----v~~~~vd~~~~~~~~~~~~~v~~~ 79 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD----VIFLKLDCNQENKTLAKELGIRVV 79 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHHHHHHHCCSBS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC----eEEEEEecCcchHHHHHHcCCCee
Confidence 47899999999999996 578999999999999999999999999987653 899999998 78999999999999
Q ss_pred cEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 119 Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
||++++++|+.+. +.|.. .+.|.+++.+++
T Consensus 80 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 PTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp SEEEEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999998765 77874 899999998764
No 58
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.78 E-value=2.8e-18 Score=137.52 Aligned_cols=104 Identities=30% Similarity=0.593 Sum_probs=93.9
Q ss_pred CCeEEe-ChhhHHHhHcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc
Q 013240 43 GKVIEL-DESNFDSAISS----FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 43 ~~v~~l-~~~~f~~~~~~----~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
+.|..+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++.++++|++|+|.+
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~ 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDAVAAVAEAAGITA 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTTHHHHHHHTCCB
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCchHHHHHHcCCCc
Confidence 568888 57899999965 89999999999999999999999999988754 49999999999999999999999
Q ss_pred ccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 118 FPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 118 ~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
+||+++|++|+.+. +.|. +.+.|.+|+.+++.
T Consensus 79 ~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 79 MPTFHVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp SSEEEEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred ccEEEEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 99999999998765 8888 99999999988764
No 59
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.78 E-value=2.8e-18 Score=135.69 Aligned_cols=103 Identities=30% Similarity=0.589 Sum_probs=92.7
Q ss_pred CeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 44 KVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 44 ~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
.|..+++++|++.+ +.+++++|.||++||++|+.+.|.+.++++.+.+ ++.++.||++.++++|++|+|.++|+++
T Consensus 1 ~v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 77 (105)
T 1fb6_A 1 EVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG---KIAVYKLNTDEAPGIATQYNIRSIPTVL 77 (105)
T ss_dssp -CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC---ceEEEEEcCcchHHHHHhCCCCcccEEE
Confidence 36789999999976 5678999999999999999999999999988754 3999999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+|++|+... +.|..+.+.+.+++++++
T Consensus 78 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 78 FFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 999998775 899999999999998753
No 60
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.78 E-value=2.7e-18 Score=137.80 Aligned_cols=103 Identities=33% Similarity=0.670 Sum_probs=94.1
Q ss_pred CCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
.+....++.++|+++++++++++|.||++||++|+.+.|.+.++++.+. ++.++.||++.++++|++|+|.++|++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~----~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT----KMVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 4678899999999999989999999999999999999999999998764 299999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++|++|+.+. +.|. +.+.|.+|+++.+
T Consensus 84 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9999998765 8888 9999999998764
No 61
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.4e-18 Score=137.16 Aligned_cols=104 Identities=22% Similarity=0.366 Sum_probs=89.2
Q ss_pred CeEEeCh-hhHHHhHcc---CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 44 KVIELDE-SNFDSAISS---FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 44 ~v~~l~~-~~f~~~~~~---~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
+|..+++ ++|++++.+ +++++|.||++||++|+.+.|.|.++++.++. ..+.|+.||++.++++|++|+|.++|
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~P 78 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN--SNVSFLSIDADENSEISELFEISAVP 78 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG--TTSEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC--CCEEEEEEecccCHHHHHHcCCCccc
Confidence 4678887 999999976 79999999999999999999999999987643 23999999999999999999999999
Q ss_pred EEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 120 TLKIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 120 tl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
|+++|++|+.+. +.|. ..++|.+++.+++.
T Consensus 79 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 79 YFIIIHKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEEEETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 999999998775 7787 45679999987653
No 62
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.77 E-value=2.4e-18 Score=139.99 Aligned_cols=106 Identities=34% Similarity=0.614 Sum_probs=95.6
Q ss_pred CCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 42 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
.+.+..+++++|.+.+ +++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+.++++|++|+|.++|+
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~Pt 87 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT---DLTVAKLDVDTNPETARNFQVVSIPT 87 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhcCCCcCCE
Confidence 4689999999999765 6778999999999999999999999999988754 49999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
+++|++|+.+. +.|..+.+.+.+|+.++++
T Consensus 88 ~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 88 LILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999998764 8999999999999987754
No 63
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.77 E-value=5.5e-18 Score=134.29 Aligned_cols=101 Identities=30% Similarity=0.631 Sum_probs=91.0
Q ss_pred eEEeCh-hhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 45 VIELDE-SNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 45 v~~l~~-~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
|..+++ ++|++.+. ++++++|.||++||++|+.+.|.+.++++.+++ ++.++.||++.++++|++|+|.++|++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDECEDIAMEYNISSMPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccchHHHHHHcCCCcccEE
Confidence 567888 99999997 789999999999999999999999999988753 499999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++|.+|+.+. +.| .+.+.+.+|+++++
T Consensus 79 ~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 9999998765 788 78999999998753
No 64
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.77 E-value=3.1e-18 Score=155.85 Aligned_cols=107 Identities=19% Similarity=0.309 Sum_probs=95.7
Q ss_pred cCCCCeEEeChhhHHHhHccCCeEEEEEE--CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----chhhhhh
Q 013240 40 KIDGKVIELDESNFDSAISSFDYILVDFY--APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----YSRLASK 112 (447)
Q Consensus 40 ~~~~~v~~l~~~~f~~~~~~~~~~lV~f~--~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-----~~~l~~~ 112 (447)
...+.|..||+.||++++++++++||.|| ||||+ +.|.|+++|+.+.+..+.|.|++|||++ ++++|++
T Consensus 13 ~~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 13 VTCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp --CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 34578999999999998888899999999 99999 9999999999986523459999999999 8999999
Q ss_pred CCCc--cccEEEEEeCCe---eEEe--cCCCCHHHHHHHHHHhcCC
Q 013240 113 QEID--AFPTLKIFMHGI---PTEY--YGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 113 ~~i~--~~Ptl~~~~~g~---~~~y--~g~~~~~~i~~fi~~~~~~ 151 (447)
|+|+ ++||+++|. |. +..| .|.++.+.|.+|+.+.++.
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~ 133 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPL 133 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSC
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhcc
Confidence 9999 999999999 87 5679 9999999999999998763
No 65
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=7.8e-19 Score=145.52 Aligned_cols=112 Identities=29% Similarity=0.557 Sum_probs=98.7
Q ss_pred CCCCeEEeChhhHHHhHc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 41 IDGKVIELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 41 ~~~~v~~l~~~~f~~~~~-~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
.++.|..|+.++|++.+. .+++++|+||++||++|+.+.|.|.++++.+.+. ..+.++.|||+.+..+|++|+|.++|
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~P 83 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATANDITNDQYKVEGFP 83 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTSCCCCSSCCCSSSS
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcCHHHHhhcCCCcCC
Confidence 457899999999999885 4789999999999999999999999999988642 35999999999999999999999999
Q ss_pred EEEEEeCCe---eEEec-CCCCHHHHHHHHHHhcCCCc
Q 013240 120 TLKIFMHGI---PTEYY-GPRKAELLVRYLKKFVAPDV 153 (447)
Q Consensus 120 tl~~~~~g~---~~~y~-g~~~~~~i~~fi~~~~~~~v 153 (447)
|+++|.+|. .+.|. |.++.+.|.+|+.+++....
T Consensus 84 t~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 84 TIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 999998874 34577 56999999999999987653
No 66
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.77 E-value=1.3e-18 Score=141.87 Aligned_cols=107 Identities=25% Similarity=0.541 Sum_probs=93.5
Q ss_pred CCCeEEeChhhHHH-hHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 42 DGKVIELDESNFDS-AISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 42 ~~~v~~l~~~~f~~-~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
++.|..|++++|.+ +++++++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.|||+.++++|++|+|.++||
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt 78 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG---KVRAGKVDCQAYPQTCQKAGIKAYPS 78 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCcCCHHHHHHcCCCccce
Confidence 36789999999965 567789999999999999999999999999998864 39999999999999999999999999
Q ss_pred EEEEeCCe-eEEecCC----CCHHHHHHHHHHhcCC
Q 013240 121 LKIFMHGI-PTEYYGP----RKAELLVRYLKKFVAP 151 (447)
Q Consensus 121 l~~~~~g~-~~~y~g~----~~~~~i~~fi~~~~~~ 151 (447)
+++|.+|. ...+.|. ++.+.|.+|+.+.+..
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 79 VKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred EEEEeCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 99997654 3346665 8999999999988654
No 67
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.77 E-value=5.9e-18 Score=136.92 Aligned_cols=100 Identities=32% Similarity=0.601 Sum_probs=90.9
Q ss_pred CeEEeCh-hhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 44 KVIELDE-SNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 44 ~v~~l~~-~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
++..+++ ++|++.++ ++++++|.||++||++|+.+.|.|.++++.+ .+.++.||++.++++|++|+|.++||
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~~~~~~~~~v~~~Pt 88 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKLEETARKYNISAMPT 88 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCccHHHHHHcCCCccce
Confidence 4899998 99999997 7899999999999999999999999998765 38999999999999999999999999
Q ss_pred EEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 121 l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+++|++|+.+. +.| .+.+.|.+++++++
T Consensus 89 ~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 89 FIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 99999998775 778 68899999998753
No 68
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.77 E-value=5.3e-18 Score=134.18 Aligned_cols=99 Identities=26% Similarity=0.583 Sum_probs=89.2
Q ss_pred EEe-ChhhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 46 IEL-DESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 46 ~~l-~~~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
..+ +.++|++.++ ++++++|.||++||++|+.+.|.|.++++.+.+ +.++.||+++++++|++|+|.++|+++
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 78 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASESEVKSMPTFQ 78 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----SEEEEEETTTCHHHHHHTTCCBSSEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC----eEEEEEEhhhhHHHHHHcCCCcCcEEE
Confidence 344 5688999997 789999999999999999999999999987643 999999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+|++|+.+. +.|. +.+.|.+|+.+++
T Consensus 79 ~~~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 79 FFKKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 999998775 8888 9999999998763
No 69
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.76 E-value=1.3e-18 Score=141.55 Aligned_cols=108 Identities=38% Similarity=0.748 Sum_probs=94.5
Q ss_pred CCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcC--CCCeEEEEEeCccchhhhhhCCCcc
Q 013240 41 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKL--KEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 41 ~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~--~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
.++.|..|++++|++.+ +++++++|+||++||++|+.+.|.|.++++.+.+. ...+.|+.|||+.++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 45789999999999986 67899999999999999999999999999988752 125999999999876 776 9999
Q ss_pred ccEEEEEeCC-e--eEEecCCCCHHHHHHHHHHhcCC
Q 013240 118 FPTLKIFMHG-I--PTEYYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 118 ~Ptl~~~~~g-~--~~~y~g~~~~~~i~~fi~~~~~~ 151 (447)
+||+++|.+| + ...|.|.++.+.|.+|+.+++..
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 9999999887 4 45699999999999999988754
No 70
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.76 E-value=7.5e-18 Score=137.33 Aligned_cols=103 Identities=24% Similarity=0.430 Sum_probs=93.4
Q ss_pred CCeEEeChhhHHHhHc----cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccc
Q 013240 43 GKVIELDESNFDSAIS----SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~----~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
..+..++.++|++.+. .+++++|.||++||++|+.+.|.|.++++.+.+ +.|+.|||++++++|++|+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCCHHHHHHcCCCcc
Confidence 5677789999999885 478999999999999999999999999987643 89999999999999999999999
Q ss_pred cEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 119 Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
|++++|++|+.+. +.|.. .+.|.+|+++++.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 89 PTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred cEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 9999999998765 89999 9999999998765
No 71
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.76 E-value=8.3e-18 Score=137.50 Aligned_cols=103 Identities=24% Similarity=0.483 Sum_probs=92.7
Q ss_pred CCCeEEeChhhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-cchhhhhhCCCccc
Q 013240 42 DGKVIELDESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-KYSRLASKQEIDAF 118 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-~~~~l~~~~~i~~~ 118 (447)
.+.+..+++++|++.+. ++++++|.||++||++|+.+.|.++++++.+.+ +.++.||++ +++++|++|+|+++
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~~~~~~~v~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD----VIFLKLDCNQENKTLAKELGIRVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHHHHHHHCCSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC----CEEEEEecCcchHHHHHHcCCCee
Confidence 47899999999999886 678999999999999999999999999987653 899999998 68999999999999
Q ss_pred cEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 119 Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
||++++++|+.+. +.|.. .+++.+++++..
T Consensus 93 Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999998775 78876 899999998764
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.76 E-value=5.6e-18 Score=159.61 Aligned_cols=107 Identities=24% Similarity=0.488 Sum_probs=98.7
Q ss_pred CCCeEEeChhhHHHhHcc--CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 42 DGKVIELDESNFDSAISS--FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~--~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
.+.|..+|+++|++.+.. +++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.|||+.++++|++|+|.++|
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~P 82 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG---QFILAKLDCDAEQMIAAQFGLRAIP 82 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS---SSEEEEEETTTCHHHHHTTTCCSSS
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC---CeEEEEEeCccCHHHHHHcCCCCCC
Confidence 367999999999998854 79999999999999999999999999998864 4999999999999999999999999
Q ss_pred EEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 120 TLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 120 tl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
|+++|.+|+.+. |.|..+.+.+.+|+...++.
T Consensus 83 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 83 TVYLFQNGQPVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred eEEEEECCEEEEEeeCCCCHHHHHHHHHHHcCC
Confidence 999999998875 99999999999999998843
No 73
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.76 E-value=9.8e-18 Score=132.32 Aligned_cols=100 Identities=27% Similarity=0.545 Sum_probs=89.4
Q ss_pred eEEeCh-hhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 45 VIELDE-SNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 45 v~~l~~-~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
|..+++ ++|++.+. ++++++|.||++||++|+.+.|.+.++++.+. .+.++.||++.++++|++|+|.++|++
T Consensus 1 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 76 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQNEEAAAKYSVTAMPTF 76 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CeecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCCHHHHHHcCCccccEE
Confidence 356766 89999997 68999999999999999999999999998764 399999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++|++|+.+. +.| .+.+.+.+|+++++
T Consensus 77 ~~~~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 77 VFIKDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 9999998775 778 68999999998753
No 74
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.76 E-value=7.9e-18 Score=152.36 Aligned_cols=111 Identities=33% Similarity=0.558 Sum_probs=100.2
Q ss_pred ccCCCCeEEeChhhHHHh-HccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc
Q 013240 39 FKIDGKVIELDESNFDSA-ISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~-~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
....+.+..||+++|++. ++++++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.|||+.++++|++|+|.+
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~ 84 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRG 84 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCTTTGGGGTCCS
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CcEEEEEECCCCHHHHHHcCCCc
Confidence 344578999999999985 57789999999999999999999999999998764 39999999999999999999999
Q ss_pred ccEEEEEeCCeeE-EecCCCCHHHHHHHHHHhcCCC
Q 013240 118 FPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (447)
Q Consensus 118 ~Ptl~~~~~g~~~-~y~g~~~~~~i~~fi~~~~~~~ 152 (447)
+||+++|++|+.+ .+.|.++.+.+.+|+.+.+...
T Consensus 85 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 85 IPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp BSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred CCEEEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 9999999999877 4899999999999999998654
No 75
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.76 E-value=8.4e-18 Score=142.95 Aligned_cols=105 Identities=22% Similarity=0.437 Sum_probs=94.1
Q ss_pred CCCeEEeC-hhhHHHhHcc--CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccc
Q 013240 42 DGKVIELD-ESNFDSAISS--FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (447)
Q Consensus 42 ~~~v~~l~-~~~f~~~~~~--~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~ 118 (447)
.+.+..++ .++|++++++ +++++|.||++||++|+.+.|.|.++++.+. .+.|+.|||++++++|++|+|.++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~ 86 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGVPEVSEKYEISSV 86 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCCHHHHHHcCCCCC
Confidence 36788997 5999999977 8999999999999999999999999998753 399999999999999999999999
Q ss_pred cEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 119 Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
|++++|.+|+.+. +.| .+.+.|.+|+.+++..
T Consensus 87 Pt~~~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 87 PTFLFFKNSQKIDRLDG-AHAPELTKKVQRHASS 119 (153)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHHHSCT
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHHhcc
Confidence 9999999998876 666 5888999999998865
No 76
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.76 E-value=1.8e-18 Score=141.36 Aligned_cols=104 Identities=35% Similarity=0.585 Sum_probs=90.0
Q ss_pred CCeEEeChhhHHHhH-ccCCeEEEEEECCCCh--------------hhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccch
Q 013240 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCG--------------HCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS 107 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~--------------~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~ 107 (447)
+.|..|++++|++.+ +++++++|.||++||+ +|+.+.|.|+++++.+.+ ++.++.||++.++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~---~~~~~~vd~d~~~ 79 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNP 79 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSCT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC---CeEEEEEECCCCH
Confidence 578999999998655 7789999999999999 999999999999987754 3999999999999
Q ss_pred hhhhhCCCccccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 108 RLASKQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 108 ~l~~~~~i~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++|++|+|.++||+++|.+|+.+. +.|.++.+++.+|+++.+
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999999999998764 999999999999998765
No 77
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.76 E-value=8.1e-18 Score=140.76 Aligned_cols=106 Identities=32% Similarity=0.620 Sum_probs=82.1
Q ss_pred CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
+.+..+++++|.+.+.+++.++|.||++||++|+.+.|.|.++++.+.+ ++.|+.||++.++++|++|+|.++||++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG---RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 7899999999999986655699999999999999999999999988754 3999999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+|.+|+.+. |.|..+.+.|.+|+.+++..
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 999998765 89999999999999988753
No 78
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.75 E-value=1.6e-17 Score=135.88 Aligned_cols=104 Identities=30% Similarity=0.532 Sum_probs=93.0
Q ss_pred CCCCeEEe-ChhhHHHhHc----cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCC
Q 013240 41 IDGKVIEL-DESNFDSAIS----SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (447)
Q Consensus 41 ~~~~v~~l-~~~~f~~~~~----~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i 115 (447)
..+.|..+ +.++|++.+. ++++++|.||++||++|+.+.|.|.++++.+. .+.|+.||++.++++|++|+|
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v 89 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDELKSVASDWAI 89 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTSHHHHHHTTC
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHHcCC
Confidence 45678999 7799999885 37899999999999999999999999998764 399999999999999999999
Q ss_pred ccccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 116 DAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 116 ~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
.++||+++|++|+.+. +.| .+.+.|.+++.+++
T Consensus 90 ~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 90 QAMPTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp CSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 9999999999998775 778 58999999998765
No 79
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.75 E-value=4e-18 Score=141.75 Aligned_cols=106 Identities=21% Similarity=0.301 Sum_probs=94.4
Q ss_pred CCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC---------ccchhhhh
Q 013240 41 IDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA---------DKYSRLAS 111 (447)
Q Consensus 41 ~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~---------~~~~~l~~ 111 (447)
.++.+..++.++|++.+++ +++|.||++||++|+.+.|.|.++++.+. +.|+.||+ +.++++|+
T Consensus 14 ~~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~~~~d~~~~l~~ 86 (135)
T 3emx_A 14 EDGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGERELSAARLEMN 86 (135)
T ss_dssp ETTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ccCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhhhhhhhhHHHHH
Confidence 3578999999999999976 99999999999999999999999997652 88999999 88999999
Q ss_pred hCCCccccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCCCc
Q 013240 112 KQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAPDV 153 (447)
Q Consensus 112 ~~~i~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~~v 153 (447)
+|+|.++||+++|++|+.+. +.|..+.+.+.++++++..++-
T Consensus 87 ~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 87 KAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp HHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC----
T ss_pred HcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 99999999999999998775 8999999999999999987643
No 80
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.74 E-value=2e-17 Score=150.11 Aligned_cols=102 Identities=25% Similarity=0.417 Sum_probs=93.9
Q ss_pred CCeEEeChhhHHHhHccCCeEEEEEEC--CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEe-----CccchhhhhhCCC
Q 013240 43 GKVIELDESNFDSAISSFDYILVDFYA--PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD-----ADKYSRLASKQEI 115 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~f~~--~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd-----~~~~~~l~~~~~i 115 (447)
+.|..||+.+|+++++.++++||.||+ |||+ +.|.|+++++.+.+ .+++.|++|| |+.++++|++|+|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~-~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSAS-SDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTT-CTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcC-CCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 579999999999999888999999999 9999 99999999999875 3469999999 5569999999999
Q ss_pred c--cccEEEEEeCCe---eEEecCCCCHHHHHHHHHHhc
Q 013240 116 D--AFPTLKIFMHGI---PTEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 116 ~--~~Ptl~~~~~g~---~~~y~g~~~~~~i~~fi~~~~ 149 (447)
+ +|||+++|.+|. +..|.|.++.+.|.+|+.+..
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 999999999997 567999999999999999985
No 81
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.74 E-value=5.3e-18 Score=135.66 Aligned_cols=102 Identities=19% Similarity=0.274 Sum_probs=89.2
Q ss_pred eEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEE
Q 013240 45 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF 124 (447)
Q Consensus 45 v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~ 124 (447)
+..++.++| +.+.++++++|.||++||++|+.+.|.|.++++.+. ++.++.||++.++++|++|+|.++|++++|
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 445678999 777778999999999999999999999999987653 388999999999999999999999999999
Q ss_pred eCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 125 MHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 125 ~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
++|+.+. +.|..+.+.|.+++.+..++
T Consensus 80 ~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred ECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 9998764 89999999999999887654
No 82
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.74 E-value=6.3e-18 Score=139.14 Aligned_cols=98 Identities=22% Similarity=0.347 Sum_probs=87.6
Q ss_pred EeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeC
Q 013240 47 ELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMH 126 (447)
Q Consensus 47 ~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~ 126 (447)
.++.+.++....++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.|||+.++++|++|+|.++||+++|++
T Consensus 29 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 105 (128)
T 3ul3_B 29 QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK---RIYLLKVDLDKNESLARKFSVKSLPTIILLKN 105 (128)
T ss_dssp CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEET
T ss_pred cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCCcCEEEEEEC
Confidence 444555666667889999999999999999999999999998864 39999999999999999999999999999999
Q ss_pred CeeEE-ecCCCCHHHHHHHHHH
Q 013240 127 GIPTE-YYGPRKAELLVRYLKK 147 (447)
Q Consensus 127 g~~~~-y~g~~~~~~i~~fi~~ 147 (447)
|+.+. +.|.++.++|.+|+++
T Consensus 106 G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 106 KTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp TEEEEEESSCCCHHHHHHHHTT
T ss_pred CEEEEEecCCCCHHHHHHHHHh
Confidence 98765 8999999999999875
No 83
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.74 E-value=1.6e-17 Score=133.70 Aligned_cols=100 Identities=27% Similarity=0.526 Sum_probs=88.5
Q ss_pred CCeEEeCh-hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIELDE-SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l~~-~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
+.+..+++ ++|+++++++++++|.||++||++|+.+.|.|.++++.+.+ +.|+.||++.++++|++|+|.++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~~~~l~~~~~v~~~Pt~ 87 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDESPDIAKECEVTAMPTF 87 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSBSEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHCCCCcccEE
Confidence 44555644 67888888889999999999999999999999999987643 89999999999999999999999999
Q ss_pred EEEeCCeeEE-ecCCCCHHHHHHHHHH
Q 013240 122 KIFMHGIPTE-YYGPRKAELLVRYLKK 147 (447)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~fi~~ 147 (447)
++|++|+.+. +.|.. .+.|.+++++
T Consensus 88 ~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred EEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 9999998765 88988 9999999875
No 84
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.74 E-value=1.5e-17 Score=135.53 Aligned_cols=108 Identities=25% Similarity=0.468 Sum_probs=95.7
Q ss_pred ccCCCCeEEeCh-hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc
Q 013240 39 FKIDGKVIELDE-SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 39 ~~~~~~v~~l~~-~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
......+..+++ ++|+++++++++++|.||++||++|+.+.|.|.++++.+.+. .+.++.||++.++++|++|+|.+
T Consensus 11 ~~~~~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~v~~~~vd~d~~~~~~~~~~v~~ 88 (121)
T 2j23_A 11 LVPRGSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD--KVGFYKVDVDEQSQIAQEVGIRA 88 (121)
T ss_dssp CCCCCCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH--HSEEEEEETTTCHHHHHHHTCCS
T ss_pred ccCCcceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC--cEEEEEEECcCCHHHHHHcCCCc
Confidence 344567888866 899999988899999999999999999999999999877642 38999999999999999999999
Q ss_pred ccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 118 FPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 118 ~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+||+++|.+|+.+. +.|. +.+.|.+|+.+.+
T Consensus 89 ~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 89 MPTFVFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp SSEEEEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred ccEEEEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 99999999998764 8888 9999999998865
No 85
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.74 E-value=2.7e-18 Score=143.55 Aligned_cols=111 Identities=12% Similarity=0.103 Sum_probs=81.2
Q ss_pred CeEEeChhhHHHhHccCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhhcCCCCeE--EEEEeCccchhhhhhCCCcccc
Q 013240 44 KVIELDESNFDSAISSFDYILVDFYAPW--CGHCKRLAPQLDEAAPILAKLKEPIV--IAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 44 ~v~~l~~~~f~~~~~~~~~~lV~f~~~~--C~~C~~~~p~~~~~a~~l~~~~~~v~--~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
.+..+++++|++.+++++.++|.|+++| |++|+.+.|.|+++++++ + ++. |++||+++++++|++|+|.++|
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~---~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P---QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T---TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c---ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 7889999999999988888999999887 999999999999999876 3 377 9999999999999999999999
Q ss_pred EEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCCCceecCC
Q 013240 120 TLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAPDVSILNS 158 (447)
Q Consensus 120 tl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~~v~~i~s 158 (447)
|+++|++|+.+. +.|.++.+.|.+|+++.+..+...+.+
T Consensus 94 T~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~~ 133 (142)
T 2es7_A 94 ATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQETV 133 (142)
T ss_dssp EEEEESCC----CEESCCCHHHHHHHHHHHHC--------
T ss_pred eEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCCc
Confidence 999999998765 999999999999999999887776653
No 86
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.74 E-value=1.7e-17 Score=140.25 Aligned_cols=98 Identities=18% Similarity=0.269 Sum_probs=88.3
Q ss_pred ChhhHHHhH--ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeC
Q 013240 49 DESNFDSAI--SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMH 126 (447)
Q Consensus 49 ~~~~f~~~~--~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~ 126 (447)
+.++|++.+ +++++++|.|||+||++|+.+.|.|.++++.+.+ .+.++.||+++++++|++|+|.++||+++|.+
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~---~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK---MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT---TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 678999988 5589999999999999999999999999987654 39999999999999999999999999999999
Q ss_pred CeeE----------EecC-CCCHHHHHHHHHHhc
Q 013240 127 GIPT----------EYYG-PRKAELLVRYLKKFV 149 (447)
Q Consensus 127 g~~~----------~y~g-~~~~~~i~~fi~~~~ 149 (447)
|+.+ .+.| ..+.++|.++++...
T Consensus 87 G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 87 GQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 9887 4788 888899988887763
No 87
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.74 E-value=3.5e-17 Score=132.32 Aligned_cols=105 Identities=25% Similarity=0.529 Sum_probs=93.5
Q ss_pred CCCeEEe-ChhhHHHhHcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCc
Q 013240 42 DGKVIEL-DESNFDSAISS----FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (447)
Q Consensus 42 ~~~v~~l-~~~~f~~~~~~----~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~ 116 (447)
.+.++.+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+. ++.++.||++.+++++++|+|.
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~ 80 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDELKDVAEAYNVE 80 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCC
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccCHHHHHHcCCC
Confidence 4678889 57999998854 7899999999999999999999999998764 3999999999999999999999
Q ss_pred cccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 117 AFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 117 ~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
++|++++|++|+.+. +.| .+.+.|.+++.+++..
T Consensus 81 ~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 81 AMPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp SBSEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred cCcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999998775 677 5899999999988754
No 88
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.1e-18 Score=145.53 Aligned_cols=104 Identities=19% Similarity=0.377 Sum_probs=90.4
Q ss_pred CCCeEEeChhhHHHhHccCC--eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCc---
Q 013240 42 DGKVIELDESNFDSAISSFD--YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID--- 116 (447)
Q Consensus 42 ~~~v~~l~~~~f~~~~~~~~--~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~--- 116 (447)
.+.|..+++++|++.+.+++ +++|+||++||++|+.+.|.|.++++.+++ .++.|+.|||++++++|++|+|.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~--~~v~~~~vd~~~~~~~~~~~~v~~~~ 83 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC--TGLNFGKVDVGRYTDVSTRYKVSTSP 83 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS--SSCEEEECCTTTCHHHHHHTTCCCCS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCccCHHHHHHccCcccC
Confidence 35799999999999996554 999999999999999999999999998863 24999999999999999999999
Q ss_pred ---cccEEEEEeCCeeEE-ecCCCCHHHHHHHHHH
Q 013240 117 ---AFPTLKIFMHGIPTE-YYGPRKAELLVRYLKK 147 (447)
Q Consensus 117 ---~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~ 147 (447)
++||+++|++|+.+. +.|..+.+.|.+|+.+
T Consensus 84 ~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCC
T ss_pred CcCCCCEEEEEECCEEEEEecCcCchHHHHHHHhc
Confidence 999999999998764 8898877766665543
No 89
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.73 E-value=3.9e-17 Score=131.69 Aligned_cols=98 Identities=15% Similarity=0.277 Sum_probs=81.8
Q ss_pred CCeEEeChhhHHHhHcc-CC--eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 43 GKVIELDESNFDSAISS-FD--YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~-~~--~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
+.+.++++++|.+.+.+ .+ +++|.||++||++|+.+.|.++++|+.+. .+.|++||+++. +++|+|++.|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~----~v~f~kvd~d~~---~~~~~v~~~P 75 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP----ETKFVKAIVNSC---IQHYHDNCLP 75 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT----TSEEEEEEGGGT---STTCCGGGCS
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC----CCEEEEEEhHHh---HHHCCCCCCC
Confidence 67899999999998844 33 99999999999999999999999998764 389999999875 6899999999
Q ss_pred EEEEEeCCeeEE-ecCCC-------CHHHHHHHHHH
Q 013240 120 TLKIFMHGIPTE-YYGPR-------KAELLVRYLKK 147 (447)
Q Consensus 120 tl~~~~~g~~~~-y~g~~-------~~~~i~~fi~~ 147 (447)
|+++|++|+.+. +.|.. +.++|..++.+
T Consensus 76 T~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 76 TIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999998875 66654 45555555543
No 90
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.73 E-value=2.8e-17 Score=131.85 Aligned_cols=103 Identities=27% Similarity=0.488 Sum_probs=92.1
Q ss_pred CCCeEEe-ChhhHHHhHcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCc
Q 013240 42 DGKVIEL-DESNFDSAISS----FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (447)
Q Consensus 42 ~~~v~~l-~~~~f~~~~~~----~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~ 116 (447)
++.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.+.++++.+. ++.++.||++.+++++++|+|.
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~~v~ 78 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELKAVAEEWNVE 78 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTCHHHHHHHHCS
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccccHHHHHhCCCC
Confidence 4678888 67999999964 7899999999999999999999999998764 3999999999999999999999
Q ss_pred cccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 117 AFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 117 ~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++|++++|++|+.+. +.| .+.+.|.+++.+++
T Consensus 79 ~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 79 AMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp STTEEEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred cccEEEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999999998775 677 68889999998765
No 91
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.72 E-value=8.4e-18 Score=136.27 Aligned_cols=102 Identities=11% Similarity=0.086 Sum_probs=86.1
Q ss_pred CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEe----CccchhhhhhCCCccc
Q 013240 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD----ADKYSRLASKQEIDAF 118 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd----~~~~~~l~~~~~i~~~ 118 (447)
..+..++.++|.+.++++++++|.||++||++|+.+.|.|.++++.+.. ++.++.++ ++..++++++|+|.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~i~~~ 88 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEEPSQLNDLQAFRSRYGIPTV 88 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTCGGGHHHHHHHHHHHTCCSS
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCCcCcHHHHHHHHHHcCCCCC
Confidence 5688899999999998889999999999999999999999999987642 35555222 2334689999999999
Q ss_pred cEEEEEeCCeeEE-ecCCCCHHHHHHHHHH
Q 013240 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKK 147 (447)
Q Consensus 119 Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~ 147 (447)
||+++|++|+.+. +.|.++.+.|.+|+++
T Consensus 89 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 89 PGFVHITDGQINVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp CEEEEEETTEEEEECCTTCCHHHHHHHHTC
T ss_pred CeEEEEECCEEEEEecCCCCHHHHHHHhhC
Confidence 9999999998764 8999999999999853
No 92
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.72 E-value=5.7e-17 Score=135.35 Aligned_cols=106 Identities=23% Similarity=0.423 Sum_probs=93.6
Q ss_pred CCCCeEEeC-hhhHHHhHc----cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCC
Q 013240 41 IDGKVIELD-ESNFDSAIS----SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (447)
Q Consensus 41 ~~~~v~~l~-~~~f~~~~~----~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i 115 (447)
..+.+..++ .++|++.+. ++++++|.||++||++|+.+.|.|.++++.+. .+.|+.||++.++++|++|+|
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~~~~~~~~~v 97 (139)
T 3d22_A 22 AGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDELSDFSASWEI 97 (139)
T ss_dssp SCTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTC
T ss_pred cCCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcccHHHHHHcCC
Confidence 356778885 799999883 57899999999999999999999999998763 399999999999999999999
Q ss_pred ccccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 116 DAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 116 ~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
.++|+++++.+|+.+. +.|. +.++|.+++.+++..
T Consensus 98 ~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 98 KATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp CEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred CcccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999999999998775 7888 899999999888654
No 93
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.71 E-value=2.5e-17 Score=135.04 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=92.2
Q ss_pred CeEEeChhhHH-----HhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEe--CccchhhhhhCCCc
Q 013240 44 KVIELDESNFD-----SAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD--ADKYSRLASKQEID 116 (447)
Q Consensus 44 ~v~~l~~~~f~-----~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd--~~~~~~l~~~~~i~ 116 (447)
.+..++..+|+ ....++++++|.||++||++|+.+.|.+.++++.+. ..+.++.|| ++.+++++++|+|.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~---~~v~~~~v~~~~d~~~~~~~~~~v~ 81 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE---GKFNIYYARLEEEKNIDLAYKYDAN 81 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS---SSCEEEEEETTSSHHHHHHHHTTCC
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc---CCeEEEEEeCCCCchHHHHHHcCCc
Confidence 34556666666 566778999999999999999999999999998875 249999999 99999999999999
Q ss_pred cccEEEEEe-CCeeEE-ecCCCCHHHHHHHHHHhcCCC
Q 013240 117 AFPTLKIFM-HGIPTE-YYGPRKAELLVRYLKKFVAPD 152 (447)
Q Consensus 117 ~~Ptl~~~~-~g~~~~-y~g~~~~~~i~~fi~~~~~~~ 152 (447)
++|++++|. +|+.+. +.|..+.+.|.+++++...+.
T Consensus 82 ~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 82 IVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp SSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred ceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 999999999 787664 899999999999999987654
No 94
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.71 E-value=9.5e-17 Score=134.48 Aligned_cols=97 Identities=16% Similarity=0.163 Sum_probs=80.9
Q ss_pred ChhhHHHhHc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeC
Q 013240 49 DESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMH 126 (447)
Q Consensus 49 ~~~~f~~~~~--~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~ 126 (447)
+.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+.+ ++.|+.||+++++++|++|+|.++||+++|++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~ 86 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITEVPDFNKMYELYDPCTVMFFFR 86 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTCCTTTTSSCSCSSCEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CeEEEEEccccCHHHHHHcCCCCCCEEEEEEC
Confidence 5788998764 579999999999999999999999999998754 39999999999999999999999999999999
Q ss_pred CeeEE----------ecCCCC-HHHHHHHHHHh
Q 013240 127 GIPTE----------YYGPRK-AELLVRYLKKF 148 (447)
Q Consensus 127 g~~~~----------y~g~~~-~~~i~~fi~~~ 148 (447)
|+.+. ..|... .+++.+++++.
T Consensus 87 G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp TEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 98764 233332 56666665544
No 95
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.70 E-value=1e-16 Score=129.91 Aligned_cols=105 Identities=24% Similarity=0.435 Sum_probs=88.6
Q ss_pred CCeEEe--ChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 43 GKVIEL--DESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 43 ~~v~~l--~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
..+..+ +..+|++.+ +++++++|.||++||++|+.+.|.|.++++.+ ..+.|+.|||+.++++|++|+|.++|
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~----~~v~~~~vd~~~~~~~~~~~~i~~~P 78 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN----KDVTFIKVDVDKNGNAADAYGVSSIP 78 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC----CCeEEEEEECCCCHHHHHhcCCCCCC
Confidence 457778 678999655 66899999999999999999999999999877 23999999999999999999999999
Q ss_pred EEEEEeC----CeeEE-ecCCCCHHHHHHHHHHhcCCC
Q 013240 120 TLKIFMH----GIPTE-YYGPRKAELLVRYLKKFVAPD 152 (447)
Q Consensus 120 tl~~~~~----g~~~~-y~g~~~~~~i~~fi~~~~~~~ 152 (447)
++++|++ |+.+. +.|..+ ++|.+.+.++..+.
T Consensus 79 t~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 79 ALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC---
T ss_pred EEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhcc
Confidence 9999998 87765 777765 55999998887653
No 96
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.70 E-value=7.7e-17 Score=133.52 Aligned_cols=106 Identities=20% Similarity=0.427 Sum_probs=91.4
Q ss_pred ccCCCCeEEeCh-hhHHHhHcc--CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCC
Q 013240 39 FKIDGKVIELDE-SNFDSAISS--FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (447)
Q Consensus 39 ~~~~~~v~~l~~-~~f~~~~~~--~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i 115 (447)
....+.+..+++ ++|+.+++. +++++|.||++||++|+.+.|.|+++++.+ .+.|+.||++.++++|++|+|
T Consensus 16 ~~~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~~l~~~~~v 90 (133)
T 3cxg_A 16 FQGQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIHPKLNDQHNI 90 (133)
T ss_dssp EETTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTCHHHHHHTTC
T ss_pred ccCCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccchHHHHHhcCC
Confidence 334567999986 889999865 369999999999999999999999988765 289999999999999999999
Q ss_pred ccccEEEEEe--CCe--eE-EecCCCCHHHHHHHHHHhcC
Q 013240 116 DAFPTLKIFM--HGI--PT-EYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 116 ~~~Ptl~~~~--~g~--~~-~y~g~~~~~~i~~fi~~~~~ 150 (447)
.++||+++|+ +|+ .+ .+.|. +.++|.+++.+++.
T Consensus 91 ~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 91 KALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred CCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9999999997 887 44 47787 89999999998764
No 97
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.69 E-value=7.6e-15 Score=148.42 Aligned_cols=301 Identities=14% Similarity=0.191 Sum_probs=221.0
Q ss_pred CCeEEe-ChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l-~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
..+..+ +.++++++++.++.++|.|+.++|..| .+.|.++|..+++. +.|+.++ +.++++++++...| +
T Consensus 110 ~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~~---~~F~~~~---~~~~~~~~~v~~~~-i 179 (481)
T 3f8u_A 110 PASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRDN---YRFAHTN---VESLVNEYDDNGEG-I 179 (481)
T ss_dssp CSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTTT---SCEEEEC---CHHHHHHHCSSSEE-E
T ss_pred cCceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhccC---ceEEEEC---CHHHHHHhCCCCCc-E
Confidence 457777 668899999989999999999887655 67899999988653 7788664 67899999999877 8
Q ss_pred EEEe--------CCeeEEec-CCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeec-CC----h----
Q 013240 122 KIFM--------HGIPTEYY-GPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG-LD----E---- 183 (447)
Q Consensus 122 ~~~~--------~g~~~~y~-g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~-~~----~---- 183 (447)
++|+ ++....|. |..+.+.|.+|+.....|.+.+++.. ++..+.+. +.++.|. .+ .
T Consensus 180 ~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~-n~~~~~~~-----~~~v~~~~~~~~~~~~~~~ 253 (481)
T 3f8u_A 180 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTED-NKDLIQGK-----DLLIAYYDVDYEKNAKGSN 253 (481)
T ss_dssp EEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTT-THHHHTTS-----SEEEEEECCCTTTCHHHHH
T ss_pred EEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChh-HHHHhcCC-----CceEEEEecccccchhhHH
Confidence 8888 34667798 88999999999999999999999765 46555421 2334332 11 1
Q ss_pred ---hHHHHHHHHhhhh---hHhHHhhc-cchhhhhhcCCC----CCCeEEEEcCCCCCcccccCCCChH--HHHHHHHhh
Q 013240 184 ---SVMSNLALKYKKK---AWFAVAKD-FSEDTMVLYDFD----KVPALVALQPSYNEHNIFYGPFDEE--FLEEFIKQN 250 (447)
Q Consensus 184 ---~~~~~~a~~~~~~---~~f~~~~~-~~~~~~~~~~i~----~~P~l~~~~~~~~~~~~~~g~~~~~--~i~~fI~~~ 250 (447)
..+..+|.+|++. ..|..+.. .....+..||++ ..|.++++.. ......+.+.++.+ .|.+|+...
T Consensus 254 ~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~-~~~ky~~~~~~t~e~~~l~~f~~~~ 332 (481)
T 3f8u_A 254 YWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDY 332 (481)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECS-SSCEEECCSCCCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcC-CCcccCCCcccCccHHHHHHHHHHH
Confidence 2367789999887 66665521 123456688887 5799999863 23344556778888 999999764
Q ss_pred C----C-------------CCccccChhhHHhhhcC-CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC---ceEEEEe
Q 013240 251 F----L-------------PLSVPINQDTLNLLKDD-KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVG 309 (447)
Q Consensus 251 ~----~-------------p~~~~l~~~~~~~~~~~-~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~---~~f~~vd 309 (447)
. . ..+..++..++..+... ++++++.|+. .....-......+.++++.+++ +.|+.+|
T Consensus 333 ~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a-~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id 411 (481)
T 3f8u_A 333 FDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYA-PWCGHCKNLEPKYKELGEKLSKDPNIVIAKMD 411 (481)
T ss_dssp HHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEEC-TTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEE
T ss_pred hcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEec-CcChhHHHhhHHHHHHHHHhccCCCEEEEEEE
Confidence 1 1 13456677888775544 6677777764 4666777888899999998764 8999999
Q ss_pred ccchHhHHhhcCCCCCCCCceEEEEeCCcc--ceecCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 310 IKQFADFADTFEANKKSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 310 ~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~--y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
+... ++++.+++ ..+|++++++.++. ...+. +..+.+.+.+|++........
T Consensus 412 ~~~~-~~~~~~~v---~~~Pt~~~~~~~~~~~~~~~~------G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 412 ATAN-DVPSPYEV---RGFPTIYFSPANKKLNPKKYE------GGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp TTSS-CCCTTCCC---CSSSEEEEECTTCTTSCEECC------SCCSHHHHHHHHHHHCSSCCC
T ss_pred CCch-hhHhhCCC---cccCEEEEEeCCCeEeeeEeC------CCCCHHHHHHHHHHhcCCccc
Confidence 9875 77788888 78999999988654 33343 345678999999998776544
No 98
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=2.2e-16 Score=131.05 Aligned_cols=101 Identities=15% Similarity=0.230 Sum_probs=86.7
Q ss_pred CCCCeEEeChhhHHHhHccC---CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc
Q 013240 41 IDGKVIELDESNFDSAISSF---DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 41 ~~~~v~~l~~~~f~~~~~~~---~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
..+.+..|+.++|.+.+.+. ++++|+||++||++|+.+.|.|.++++.+. .+.|+.||++++. ++|+|.+
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~~---~~~~i~~ 80 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSCI---EHYHDNC 80 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSSC---SSCCSSC
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcCc---ccCCCCC
Confidence 35789999999999988542 699999999999999999999999998763 3999999998875 7899999
Q ss_pred ccEEEEEeCCeeEE-ecCCC-------CHHHHHHHHHHh
Q 013240 118 FPTLKIFMHGIPTE-YYGPR-------KAELLVRYLKKF 148 (447)
Q Consensus 118 ~Ptl~~~~~g~~~~-y~g~~-------~~~~i~~fi~~~ 148 (447)
+||+++|++|+.+. +.|.. +.+.|.+++.+.
T Consensus 81 ~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 81 LPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp CSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99999999997764 67765 678888888776
No 99
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.68 E-value=4.5e-16 Score=142.59 Aligned_cols=192 Identities=13% Similarity=0.097 Sum_probs=135.5
Q ss_pred hhHHHhHcc-CCeEEEEEECCC--ChhhhhhhHHHHHHHHHhhcCCCC--eEEEEEeCccchhhhhhCCCccccEEEEEe
Q 013240 51 SNFDSAISS-FDYILVDFYAPW--CGHCKRLAPQLDEAAPILAKLKEP--IVIAKVDADKYSRLASKQEIDAFPTLKIFM 125 (447)
Q Consensus 51 ~~f~~~~~~-~~~~lV~f~~~~--C~~C~~~~p~~~~~a~~l~~~~~~--v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~ 125 (447)
+.|.+++.. .++++|.||++| |++|+.+.|.++++|+......++ |.|+.+|+++++++|++|||+++||+.+|
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 456677743 479999999999 999999999999999864211223 99999999999999999999999999999
Q ss_pred CCeeEEecCCCCHHHHHHHHHHhcC--CCceecCChhHHHHHHHhcCCcccEEEeecC-Chh-------HHHHHHHHhh-
Q 013240 126 HGIPTEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGL-DES-------VMSNLALKYK- 194 (447)
Q Consensus 126 ~g~~~~y~g~~~~~~i~~fi~~~~~--~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~-~~~-------~~~~~a~~~~- 194 (447)
+| ...|.|.+..+.+..|+...+. .....+ +++..+. +.... ..++++.|+. .+. .+..+|..+.
T Consensus 94 ~g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~-~~~~~-~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~ 169 (243)
T 2hls_A 94 GG-EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEA-LKSLK-GRVHIETIITPSCPYCPYAVLLAHMFAYEAWK 169 (243)
T ss_dssp TT-TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHH-HHHCC-SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHH
T ss_pred CC-ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHH-HHHcC-CCcEEEEEECCCCCCcHHHHHHHHHHHHHccc
Confidence 77 7789999988899999877642 112223 3433333 33322 2245665643 332 4556666662
Q ss_pred ---hhhHhHHh-hccchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCChHHHHHHHHhhCC
Q 013240 195 ---KKAWFAVA-KDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFL 252 (447)
Q Consensus 195 ---~~~~f~~~-~~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~~~~~~i~~fI~~~~~ 252 (447)
....+..+ .+...++..+|++.++|++++ . +. ..+.|..+.+.|.+||.+..-
T Consensus 170 ~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~--G~-~~~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 170 QGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--N--GY-LVFVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp TTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--T--TE-EEEESCCCHHHHHHHHHHHHT
T ss_pred ccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--C--CE-EEEeCCCCHHHHHHHHHHHhh
Confidence 22222222 223467788999999999888 2 22 348899999999999988743
No 100
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.66 E-value=4.6e-16 Score=141.07 Aligned_cols=105 Identities=19% Similarity=0.224 Sum_probs=92.4
Q ss_pred eEEeChhhHHHhHccCCeE-EEEEECCCChhhhhhhHHHHHHHHHhhcC-CCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 45 VIELDESNFDSAISSFDYI-LVDFYAPWCGHCKRLAPQLDEAAPILAKL-KEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 45 v~~l~~~~f~~~~~~~~~~-lV~f~~~~C~~C~~~~p~~~~~a~~l~~~-~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
+..+++++|+.+.+.++++ +|.||++||++|+.+.|.|.++++.+.+. ...+.++.|||+.++++|++|+|.++||++
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 197 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIV 197 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEE
Confidence 4567889999887666777 99999999999999999999999988621 124999999999999999999999999999
Q ss_pred EEeCCeeE-EecCCCCHHHHHHHHHHhc
Q 013240 123 IFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 123 ~~~~g~~~-~y~g~~~~~~i~~fi~~~~ 149 (447)
+|++|+.. .|.|.++.+.|.+|+.+.+
T Consensus 198 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 198 IQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 99999765 4999999999999998764
No 101
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.48 E-value=5.7e-18 Score=133.97 Aligned_cols=102 Identities=33% Similarity=0.631 Sum_probs=90.8
Q ss_pred CeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 44 KVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 44 ~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
.+..|++++|.+.+ +++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.||++.++++|++|++.++|+++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 2yj7_A 2 SVIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG---KVKVVKVNVDENPNTAAQYGIRSIPTLL 78 (106)
Confidence 46788999998765 6778999999999999999999999999987754 3999999999999999999999999999
Q ss_pred EEeCCeeEE-ecCCCCHHHHHHHHHHh
Q 013240 123 IFMHGIPTE-YYGPRKAELLVRYLKKF 148 (447)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~fi~~~ 148 (447)
+|++|+... |.|..+.+.+.+|+.+.
T Consensus 79 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 998887664 89999999999998764
No 102
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.65 E-value=2.3e-17 Score=162.32 Aligned_cols=111 Identities=23% Similarity=0.329 Sum_probs=94.6
Q ss_pred ccCCCCeEEeChhhHHHhHccC--CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCC-----CeEEEEEeCccchhhhh
Q 013240 39 FKIDGKVIELDESNFDSAISSF--DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKE-----PIVIAKVDADKYSRLAS 111 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~~--~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~-----~v~~~~Vd~~~~~~l~~ 111 (447)
...++.|..|++++|++++.++ ++++|+|||+||++|+.+.|.|.++++.+....+ .+.|+.|||+.++++|+
T Consensus 19 ~~~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~ 98 (470)
T 3qcp_A 19 FHLDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCR 98 (470)
T ss_dssp CTTCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHH
T ss_pred cCCCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHH
Confidence 4456889999999999998644 7999999999999999999999999998864322 59999999999999999
Q ss_pred hCCCccccEEEEEeCCe---eEEecCCCCHHHHHHHHHHhcC
Q 013240 112 KQEIDAFPTLKIFMHGI---PTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 112 ~~~i~~~Ptl~~~~~g~---~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
+|+|.++||+++|.+|. +..|.|.++.+.| +|+.+++.
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l~ 139 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHLE 139 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTCC
T ss_pred HcCCCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhcC
Confidence 99999999999997653 4469998888777 77766653
No 103
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.65 E-value=1.1e-15 Score=128.33 Aligned_cols=127 Identities=17% Similarity=0.251 Sum_probs=99.8
Q ss_pred HHHhhCCCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEec--cchHhHHhhcCC
Q 013240 246 FIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGI--KQFADFADTFEA 322 (447)
Q Consensus 246 fI~~~~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~--~~~~~~~~~~~i 322 (447)
-++++.+|+|.++|+++...++..+.+.+++++...+....+.+.+.++.+|+++++ +.|+++|. .++...++.||+
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl 86 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGL 86 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTC
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCC
Confidence 356889999999999999999998888887766544444578889999999999997 99999999 677788899999
Q ss_pred CCCCCCceEEEEeC--CccceecCCCCCCCcccchhHHHHHHHHHhcCccccccccCC
Q 013240 323 NKKSKLPKMVVWDG--NENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGP 378 (447)
Q Consensus 323 ~~~~~~P~vvi~~~--~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~~~ks~p 378 (447)
+..+.|+++|.+. +++.|.+. .++++.+.|.+|+++|++||++|++||+|
T Consensus 87 -~~~~~P~v~i~~~~~~~~Ky~~~-----~~~~t~~~i~~Fv~d~l~GkL~p~~KSEp 138 (147)
T 3bj5_A 87 -KKEECPAVRLITLEEEMTKYKPE-----SEELTAERITEFCHRFLEGKIKPHLMSQE 138 (147)
T ss_dssp -CGGGCSEEEEEECSSSCEEECCS-----CCCCCHHHHHHHHHHHHTTCSCEEECCSC
T ss_pred -CcccCCEEEEEecccccccCCCC-----cccCCHHHHHHHHHHHHcCCccccccCCC
Confidence 5568999999986 33333332 35677899999999999999999999994
No 104
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=4e-16 Score=128.48 Aligned_cols=105 Identities=28% Similarity=0.452 Sum_probs=89.8
Q ss_pred eEEeChhhHHHhH----ccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeCc--cchhhhhhCCC
Q 013240 45 VIELDESNFDSAI----SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDAD--KYSRLASKQEI 115 (447)
Q Consensus 45 v~~l~~~~f~~~~----~~~~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~~--~~~~l~~~~~i 115 (447)
.+.+++.+|++.+ .++++++|.||++||++|+.+.|.+ .++++.+.. .+.++.|||+ .+.++|++|+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~~v 84 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR---HFVNLKMDMEKGEGVELRKKYGV 84 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH---HSEEEEECSSSTTHHHHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc---CeEEEEEecCCcchHHHHHHcCC
Confidence 4456778888877 3678999999999999999999999 777776654 3889999998 57899999999
Q ss_pred ccccEEEEE-eCCeeE-EecCCCCHHHHHHHHHHhcCCC
Q 013240 116 DAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (447)
Q Consensus 116 ~~~Ptl~~~-~~g~~~-~y~g~~~~~~i~~fi~~~~~~~ 152 (447)
.++|++++| .+|+.+ .+.|..+.+.|.+|+++.+.++
T Consensus 85 ~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 85 HAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 999999999 578766 4899999999999999988764
No 105
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.65 E-value=3.4e-16 Score=140.42 Aligned_cols=102 Identities=21% Similarity=0.303 Sum_probs=88.7
Q ss_pred CCCeEEe-ChhhHHHhHccC---CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc
Q 013240 42 DGKVIEL-DESNFDSAISSF---DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (447)
Q Consensus 42 ~~~v~~l-~~~~f~~~~~~~---~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~ 117 (447)
.+.|..+ +.++|.+.+.+. ++++|.||++||++|+.+.|.|.+++..+. .+.|+.|||+ ++++|++|+|.+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~-~~~l~~~~~i~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS-NTGAGDRFSSDV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH-HHTCSTTSCGGG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC-cHHHHHHCCCCC
Confidence 4779999 899999999543 799999999999999999999999998763 4999999999 889999999999
Q ss_pred ccEEEEEeCCeeEE-ecCCCCH-------HHHHHHHHHh
Q 013240 118 FPTLKIFMHGIPTE-YYGPRKA-------ELLVRYLKKF 148 (447)
Q Consensus 118 ~Ptl~~~~~g~~~~-y~g~~~~-------~~i~~fi~~~ 148 (447)
+||+++|++|+.+. |.|.... +.|..|+.++
T Consensus 173 ~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 LPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 99999999998764 7887653 7777777654
No 106
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.63 E-value=1.7e-14 Score=130.71 Aligned_cols=194 Identities=13% Similarity=0.116 Sum_probs=149.5
Q ss_pred CCeEEe-ChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l-~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
..+..| +.++++++++.++.++|-|+++| |..+.+.|.++|+.+. .+.|+.+. ++++|+++++++ |++
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~----~~~F~~t~---~~~v~~~~~v~~-p~i 77 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFP----GVSFGIST---DSEVLTHYNITG-NTI 77 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCT----TSEEEEEC---CHHHHHHTTCCS-SEE
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCC----CceEEEEC---CHHHHHHcCCCC-CeE
Confidence 456666 56999999999999999999998 5688999999999883 38888754 789999999998 999
Q ss_pred EEEeCC--eeEEecC----CCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecC-C---h----hHHH
Q 013240 122 KIFMHG--IPTEYYG----PRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGL-D---E----SVMS 187 (447)
Q Consensus 122 ~~~~~g--~~~~y~g----~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~-~---~----~~~~ 187 (447)
++|+++ ....|.| .++.++|.+|+.....|.+.+++ .+++..+.+.... .+++.|.. . . ..++
T Consensus 78 ~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t-~~n~~~~~~~~~~--~~~l~f~~~~~~~~~~~~~~~~ 154 (227)
T 4f9z_D 78 CLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYN-PVTVIGLFNSVIQ--IHLLLIMNKASPEYEENMHRYQ 154 (227)
T ss_dssp EEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECC-HHHHHHHHHSSCC--EEEEEEECTTSTTHHHHHHHHH
T ss_pred EEEEecCcccccccccccCCCCHHHHHHHHHHhCCCceeecC-cccHHHHhccCCc--eEEEEEEcCCcchHHHHHHHHH
Confidence 999984 5667884 89999999999999999999996 4567777765432 24444422 1 1 3688
Q ss_pred HHHHHhhhhhHhHHhhcc---chhhhhhcCCC--CCCeEEEEcCCCCCcccc-cCCCChHHHHHHHHhh
Q 013240 188 NLALKYKKKAWFAVAKDF---SEDTMVLYDFD--KVPALVALQPSYNEHNIF-YGPFDEEFLEEFIKQN 250 (447)
Q Consensus 188 ~~a~~~~~~~~f~~~~~~---~~~~~~~~~i~--~~P~l~~~~~~~~~~~~~-~g~~~~~~i~~fI~~~ 250 (447)
.+|..+++...|..+... ...++..||++ .+|+++++.........+ .+.++.+.|.+|+...
T Consensus 155 ~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 155 KAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 889999988777666321 23467889998 689999998653333333 3689999999999864
No 107
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.63 E-value=2.7e-15 Score=152.64 Aligned_cols=112 Identities=34% Similarity=0.590 Sum_probs=97.8
Q ss_pred CCCCeEEeChhhHHHhH-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcccc
Q 013240 41 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (447)
Q Consensus 41 ~~~~v~~l~~~~f~~~~-~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~P 119 (447)
..+.|..|+.++|+..+ +.+++++|.||||||+||+.+.|.|.++++.+......+.++.|||+.+... + |+|.++|
T Consensus 356 ~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~P 433 (504)
T 2b5e_A 356 QDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYP 433 (504)
T ss_dssp CSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSS
T ss_pred ccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecC
Confidence 45789999999999987 5578999999999999999999999999999873334699999999987644 4 9999999
Q ss_pred EEEEEeCCe---eEEecCCCCHHHHHHHHHHhcCCCce
Q 013240 120 TLKIFMHGI---PTEYYGPRKAELLVRYLKKFVAPDVS 154 (447)
Q Consensus 120 tl~~~~~g~---~~~y~g~~~~~~i~~fi~~~~~~~v~ 154 (447)
|+++|.+|+ +..|.|.++.+.|.+|+.+.....+.
T Consensus 434 t~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~~ 471 (504)
T 2b5e_A 434 TIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDVD 471 (504)
T ss_dssp EEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCCC
T ss_pred eEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCCC
Confidence 999999885 56799999999999999999876653
No 108
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.62 E-value=4.3e-17 Score=134.24 Aligned_cols=108 Identities=29% Similarity=0.534 Sum_probs=93.9
Q ss_pred ccCCCCeEEe-ChhhHHHhHcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhC
Q 013240 39 FKIDGKVIEL-DESNFDSAISS----FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQ 113 (447)
Q Consensus 39 ~~~~~~v~~l-~~~~f~~~~~~----~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~ 113 (447)
....+.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+. .+.++.||++.++++|++|
T Consensus 10 ~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~ 85 (130)
T 1wmj_A 10 AAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDELKEVAEKY 85 (130)
T ss_dssp CSSCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTSGGGHHHH
T ss_pred cccCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccchHHHHHHc
Confidence 4445788888 45999998853 7899999999999999999999999998764 3889999999999999999
Q ss_pred CCccccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 114 EIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 114 ~i~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+|.++|++++|++|+.+. +.| .+.+.|.+++.+++..
T Consensus 86 ~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 86 NVEAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp TCCSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred CCCccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 999999999999998765 677 5888999999988764
No 109
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.61 E-value=2.3e-15 Score=124.48 Aligned_cols=94 Identities=20% Similarity=0.379 Sum_probs=80.9
Q ss_pred HHHhHccCCeEEEEEECCCChhhhhhhHHHH--HHHHHhhcCCCCeEEEEEeC---ccchhhhhhCCC---ccccEEEEE
Q 013240 53 FDSAISSFDYILVDFYAPWCGHCKRLAPQLD--EAAPILAKLKEPIVIAKVDA---DKYSRLASKQEI---DAFPTLKIF 124 (447)
Q Consensus 53 f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~--~~a~~l~~~~~~v~~~~Vd~---~~~~~l~~~~~i---~~~Ptl~~~ 124 (447)
+..+..++++++|.||++||++|+.+.|.|. ++++.+++ ++.++.||+ +.+++++++|+| .++|++++|
T Consensus 22 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~---~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~ 98 (133)
T 3fk8_A 22 LAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK---HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVV 98 (133)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH---HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEE
T ss_pred HHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC---CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEE
Confidence 3333456899999999999999999999999 99988854 399999999 999999999999 999999999
Q ss_pred -eCCeeEE-ecC-------CCCHHHHHHHHHHhc
Q 013240 125 -MHGIPTE-YYG-------PRKAELLVRYLKKFV 149 (447)
Q Consensus 125 -~~g~~~~-y~g-------~~~~~~i~~fi~~~~ 149 (447)
.+|+.+. +.| .++.+.+.+|++++.
T Consensus 99 d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 99 NSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp CTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 7787765 677 578899999988753
No 110
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.61 E-value=1.4e-15 Score=126.15 Aligned_cols=98 Identities=20% Similarity=0.343 Sum_probs=85.0
Q ss_pred ChhhHHHhHcc--CCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeC----ccchhhhhhCCCcccc
Q 013240 49 DESNFDSAISS--FDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDA----DKYSRLASKQEIDAFP 119 (447)
Q Consensus 49 ~~~~f~~~~~~--~~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~----~~~~~l~~~~~i~~~P 119 (447)
+.++|+..+.+ +++++|.||++||++|+.+.|.+ .++++.+.+ +.++.||+ +.+.++|++|+|.++|
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~----~~~~~vd~~~~~~~~~~l~~~~~v~~~P 93 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD----TVLLQANVTANDAQDVALLKHLNVLGLP 93 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT----SEEEEEECTTCCHHHHHHHHHTTCCSSS
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC----cEEEEEeCCCCcchHHHHHHHcCCCCCC
Confidence 56778888853 78999999999999999999999 888887643 89999999 6678999999999999
Q ss_pred EEEEE-eCCeeE---EecCCCCHHHHHHHHHHhcC
Q 013240 120 TLKIF-MHGIPT---EYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 120 tl~~~-~~g~~~---~y~g~~~~~~i~~fi~~~~~ 150 (447)
++++| .+|+.+ .+.|..+.++|.+++.+..+
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred EEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 99999 789885 58999999999999987654
No 111
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.61 E-value=2.4e-15 Score=136.71 Aligned_cols=103 Identities=20% Similarity=0.267 Sum_probs=87.9
Q ss_pred CCCCeEEe-ChhhHHHhHc---cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCc
Q 013240 41 IDGKVIEL-DESNFDSAIS---SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (447)
Q Consensus 41 ~~~~v~~l-~~~~f~~~~~---~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~ 116 (447)
..+.|..| +..+|.+.+. .+++++|.||++||++|+.+.|.|.+++..+.+ +.|+.||++. +.+|.+|+|.
T Consensus 110 ~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~----v~f~kVd~d~-~~l~~~~~I~ 184 (245)
T 1a0r_P 110 RYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM----VKFCKIKASN-TGAGDRFSSD 184 (245)
T ss_dssp CCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT----SEEEEEEHHH-HCCTTSSCTT
T ss_pred CCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC----CEEEEEeCCc-HHHHHHCCCC
Confidence 35689999 7899999994 368999999999999999999999999987643 9999999987 7899999999
Q ss_pred cccEEEEEeCCeeEE-ecCC-------CCHHHHHHHHHHh
Q 013240 117 AFPTLKIFMHGIPTE-YYGP-------RKAELLVRYLKKF 148 (447)
Q Consensus 117 ~~Ptl~~~~~g~~~~-y~g~-------~~~~~i~~fi~~~ 148 (447)
++||+++|++|+.+. +.|. ++.+.|..|+.++
T Consensus 185 ~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 185 VLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp TCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 999999999998764 5553 4566777777765
No 112
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.60 E-value=2.6e-15 Score=113.62 Aligned_cols=83 Identities=25% Similarity=0.380 Sum_probs=75.3
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHH
Q 013240 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~ 140 (447)
.+.+|.||++||++|+.+.|.++++++.+.+ ++.+..||++++++++++|++.++|++++ +|+. .+.|..+.++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCCHHH
Confidence 4679999999999999999999999987653 49999999999999999999999999999 8887 8899999999
Q ss_pred HHHHHHHhc
Q 013240 141 LVRYLKKFV 149 (447)
Q Consensus 141 i~~fi~~~~ 149 (447)
+.+++++.+
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998753
No 113
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.60 E-value=2.8e-15 Score=124.08 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=94.4
Q ss_pred CeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCcc--ccEE
Q 013240 44 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA--FPTL 121 (447)
Q Consensus 44 ~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~--~Ptl 121 (447)
-|..+|+++|+++++...+++|.||++ |++|+.+.|.++++|+++++ ++.|++||.+++++++++|||++ .|++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g---k~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG---VINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT---TSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC---eEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 378999999999998889999999999 89999999999999987754 49999999999999999999999 9999
Q ss_pred EEEeC--CeeEEec--CCCCHHHHHHHHHHhcCCCc
Q 013240 122 KIFMH--GIPTEYY--GPRKAELLVRYLKKFVAPDV 153 (447)
Q Consensus 122 ~~~~~--g~~~~y~--g~~~~~~i~~fi~~~~~~~v 153 (447)
++|.+ |+..... |..+.+.|.+|+++++...+
T Consensus 83 ~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 83 AIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp EEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred EEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCc
Confidence 99987 6665554 99999999999998875444
No 114
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.59 E-value=4.4e-15 Score=121.07 Aligned_cols=100 Identities=18% Similarity=0.253 Sum_probs=85.4
Q ss_pred CeEEeChhhHHHhHcc--CCeEEEEEECC-------CChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC-------ccch
Q 013240 44 KVIELDESNFDSAISS--FDYILVDFYAP-------WCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-------DKYS 107 (447)
Q Consensus 44 ~v~~l~~~~f~~~~~~--~~~~lV~f~~~-------~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~-------~~~~ 107 (447)
.+...+.++|++.+.+ +++++|.||++ ||++|+.+.|.|.++++.+.+ .+.|+.||+ +.++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHHHHHCTTC
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCchhhhchhH
Confidence 4666789999999965 79999999999 999999999999999987643 499999999 7899
Q ss_pred hhhhhCCCccccEEEEEeCCeeEE-ecCCCCHHHHHHHHHH
Q 013240 108 RLASKQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKK 147 (447)
Q Consensus 108 ~l~~~~~i~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~ 147 (447)
+++++|+|.++||+++|.+|.... +.| .+.+.|.+|+.+
T Consensus 83 ~~~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFRKNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 999999999999999999875554 444 567888888764
No 115
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.59 E-value=3.6e-15 Score=135.47 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=90.3
Q ss_pred CCeEEeChhhHHHhHccCCeE-EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIELDESNFDSAISSFDYI-LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~-lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
+.+..|++++|+.+++.++++ +|.||++||++|+.+.|.|.+++..+. .+.++.|||+.++++|++|+|.++|++
T Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 193 (229)
T 2ywm_A 118 QRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND----YITSKVIDASENQDLAEQFQVVGVPKI 193 (229)
T ss_dssp TTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEEGGGCHHHHHHTTCCSSSEE
T ss_pred CCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC----CeEEEEEECCCCHHHHHHcCCcccCEE
Confidence 346778999999988666666 889999999999999999999998762 499999999999999999999999999
Q ss_pred EEEeCCeeEEecCCCCHHHHHHHHHHhcC
Q 013240 122 KIFMHGIPTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 122 ~~~~~g~~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
++ +|+...|.|.++.+.|.+|+.+.+.
T Consensus 194 ~~--~G~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 194 VI--NKGVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp EE--GGGTEEEESCCCHHHHHHHHHHHHH
T ss_pred EE--CCEEEEeeCCCCHHHHHHHHHHHhh
Confidence 98 7886569999999999999988753
No 116
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.58 E-value=7.1e-15 Score=115.06 Aligned_cols=98 Identities=16% Similarity=0.121 Sum_probs=85.2
Q ss_pred CCeEEe-ChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCCcc
Q 013240 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDA 117 (447)
Q Consensus 43 ~~v~~l-~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~~i~~ 117 (447)
++...| +.++|++++++++|++|.|||+||+.|+++.|.|+++++. . ++.++.||.+++++ ++.++||+.
T Consensus 6 ~~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~----~v~~~~vdVde~r~~Sn~IA~~~~V~h 80 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-R----DMDGYYLIVQQERDLSDYIAKKTNVKH 80 (112)
T ss_dssp GCEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H----TCCEEEEEGGGGHHHHHHHHHHHTCCC
T ss_pred cceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C----CceEEEEEeecCchhhHHHHHHhCCcc
Confidence 456677 5588999998899999999999999999999999999873 2 38899999999987 799999995
Q ss_pred -ccEEEEEeCCeeEE--ecCCCCHHHHHHHH
Q 013240 118 -FPTLKIFMHGIPTE--YYGPRKAELLVRYL 145 (447)
Q Consensus 118 -~Ptl~~~~~g~~~~--y~g~~~~~~i~~fi 145 (447)
.|++++|++|+.+. -+|..+.+.|.+.+
T Consensus 81 ~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 81 ESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp CSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999999998875 57888888887654
No 117
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.58 E-value=3.7e-15 Score=112.76 Aligned_cols=82 Identities=22% Similarity=0.301 Sum_probs=74.6
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHH
Q 013240 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELL 141 (447)
Q Consensus 62 ~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i 141 (447)
..+|.||++||++|+.+.|.++++++.+.+ ++.+..||++++++++++|+|.++|++++ +|+. .+.|..+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD---KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS---SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCCHHHH
Confidence 358999999999999999999999988753 48999999999999999999999999999 8877 88999999999
Q ss_pred HHHHHHhc
Q 013240 142 VRYLKKFV 149 (447)
Q Consensus 142 ~~fi~~~~ 149 (447)
.+++.+.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998765
No 118
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.56 E-value=2.6e-15 Score=118.81 Aligned_cols=76 Identities=22% Similarity=0.287 Sum_probs=65.2
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc------cchhhhhhCCCccccEEEEEeCCeeEEec
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------KYSRLASKQEIDAFPTLKIFMHGIPTEYY 133 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~------~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~ 133 (447)
.++.+|.|||+||++|+.+.|.|.++++.+. .|||+ .++++|++|+|.++||+++ +|+. |.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~--~~ 78 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT--YT 78 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE--EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE--ec
Confidence 3567999999999999999999999986542 57777 6889999999999999877 7864 89
Q ss_pred CCCCHHHHHHHHHHh
Q 013240 134 GPRKAELLVRYLKKF 148 (447)
Q Consensus 134 g~~~~~~i~~fi~~~ 148 (447)
|.++.+.|.+|+...
T Consensus 79 G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 79 GVRSLEALAVASGYP 93 (106)
T ss_dssp SCCCHHHHHHHHTCC
T ss_pred CCCCHHHHHHHhCCc
Confidence 999999999997543
No 119
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.56 E-value=3.2e-14 Score=130.16 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=87.5
Q ss_pred EeChhhHHHhHc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcC-CCCeEEEEEeCccchhhhhhCCCccccEEEEE
Q 013240 47 ELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKL-KEPIVIAKVDADKYSRLASKQEIDAFPTLKIF 124 (447)
Q Consensus 47 ~l~~~~f~~~~~-~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~-~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~ 124 (447)
.+++++++.+.+ .++++++.||+|||+||+.+.|.|.+++..+... .+.|.++.|||+.++++|++|+|.++||+++
T Consensus 124 ~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i- 202 (243)
T 2hls_A 124 GLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI- 202 (243)
T ss_dssp CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE-
T ss_pred CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE-
Confidence 355666665543 3567899999999999999999999999887421 1359999999999999999999999999988
Q ss_pred eCCeeEEecCCCCHHHHHHHHHHhcCCCce
Q 013240 125 MHGIPTEYYGPRKAELLVRYLKKFVAPDVS 154 (447)
Q Consensus 125 ~~g~~~~y~g~~~~~~i~~fi~~~~~~~v~ 154 (447)
+|+.. |.|.++.++|.+|+.+.+.+...
T Consensus 203 -~G~~~-~~G~~~~~~l~~~l~~~~~~~~~ 230 (243)
T 2hls_A 203 -NGYLV-FVGVPYEEDFLDYVKSAAEGRLT 230 (243)
T ss_dssp -TTEEE-EESCCCHHHHHHHHHHHHTTCCC
T ss_pred -CCEEE-EeCCCCHHHHHHHHHHHhhcccc
Confidence 88754 99999999999999998876443
No 120
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.24 E-value=1.9e-15 Score=124.40 Aligned_cols=99 Identities=17% Similarity=0.305 Sum_probs=83.3
Q ss_pred hhhHHHhHccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeC--ccchhhhhhCCCccccEEEEE
Q 013240 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDAFPTLKIF 124 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~--~~~~~l~~~~~i~~~Ptl~~~ 124 (447)
++.+.....++++++|.||++||++|+.+.|.+ .++++.+.+ ++.++.||+ +.+.++|++|+|.++|++++|
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA---RFVVASVSVDTPEGQELARRYRVPGTPTFVFL 85 (130)
Confidence 345566667789999999999999999999999 888876644 488999999 466899999999999999999
Q ss_pred --eCCee--E-EecCCCCHHHHHHHHHHhcCC
Q 013240 125 --MHGIP--T-EYYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 125 --~~g~~--~-~y~g~~~~~~i~~fi~~~~~~ 151 (447)
++|+. + .+.|..+.+.+.+++++.+..
T Consensus 86 d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 86 VPKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 56876 4 489999999999999887653
No 121
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.49 E-value=3.7e-14 Score=122.75 Aligned_cols=103 Identities=16% Similarity=0.305 Sum_probs=83.1
Q ss_pred CeEEeChhhHHHhH----ccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeCccchhh-------
Q 013240 44 KVIELDESNFDSAI----SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKYSRL------- 109 (447)
Q Consensus 44 ~v~~l~~~~f~~~~----~~~~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~~~~~~l------- 109 (447)
....++..+|++.+ .++++++|.||++||++|+.+.+.+ .++.+.+++ ++.++.||++.+.++
T Consensus 27 ~~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~~~~~~~~~~~ 103 (172)
T 3f9u_A 27 NEVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNKTPLTEPVKIM 103 (172)
T ss_dssp -CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCCCEEEEEEEEE
T ss_pred cccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcccccchhhhhh
Confidence 34556677788777 5679999999999999999985555 556655554 389999999988766
Q ss_pred -------------------hhhCCCccccEEEEE-eCCeeEE-ecCCCC-HHHHHHHHHHhc
Q 013240 110 -------------------ASKQEIDAFPTLKIF-MHGIPTE-YYGPRK-AELLVRYLKKFV 149 (447)
Q Consensus 110 -------------------~~~~~i~~~Ptl~~~-~~g~~~~-y~g~~~-~~~i~~fi~~~~ 149 (447)
+++|+|.++||++++ .+|+.+. +.|..+ .+.+.+|+++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 104 ENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp ETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999 6787764 789998 999999998764
No 122
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.46 E-value=5.8e-14 Score=111.50 Aligned_cols=90 Identities=13% Similarity=0.266 Sum_probs=69.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc--hhhhhhCCCccccEEEEEeCCeeEE-ecCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY--SRLASKQEIDAFPTLKIFMHGIPTE-YYGP 135 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~--~~l~~~~~i~~~Ptl~~~~~g~~~~-y~g~ 135 (447)
+...+||+|||+||++|+.+.+......+.... ...+.+.+||.+.+ .+++.+++|.+.|||++|++|+.+. ..|.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCC
Confidence 347899999999999999998654432211100 01156788888775 5899999999999999999998775 8999
Q ss_pred CCHHHHHHHHHHhc
Q 013240 136 RKAELLVRYLKKFV 149 (447)
Q Consensus 136 ~~~~~i~~fi~~~~ 149 (447)
..++.+.+|+.+.+
T Consensus 96 ~~~~~f~~~L~~~l 109 (116)
T 3dml_A 96 PGEDFFWPMLARLI 109 (116)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999998764
No 123
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.46 E-value=3.9e-13 Score=114.04 Aligned_cols=89 Identities=19% Similarity=0.326 Sum_probs=75.8
Q ss_pred ccCCeEEEEEE-CCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeCccch-----------hhhhhCCCccccEEE
Q 013240 58 SSFDYILVDFY-APWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKYS-----------RLASKQEIDAFPTLK 122 (447)
Q Consensus 58 ~~~~~~lV~f~-~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~~~~~-----------~l~~~~~i~~~Ptl~ 122 (447)
.++++++|.|| ++||++|+.+.|.+ .++++.+.. .+.++.||++... +++++|+|.++|+++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~---~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~ 121 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV---HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELV 121 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEE
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC---cEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEE
Confidence 46789999999 99999999999999 777665533 3889999998764 899999999999999
Q ss_pred EE-eCCeeEE-ecCCC--CHHHHHHHHHHhcC
Q 013240 123 IF-MHGIPTE-YYGPR--KAELLVRYLKKFVA 150 (447)
Q Consensus 123 ~~-~~g~~~~-y~g~~--~~~~i~~fi~~~~~ 150 (447)
++ .+|+.+. + |.. +.+.+.+++++.+.
T Consensus 122 ~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 122 FIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp EECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred EEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 99 6787765 6 888 89999999988764
No 124
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.45 E-value=3.7e-13 Score=111.11 Aligned_cols=87 Identities=15% Similarity=0.296 Sum_probs=77.2
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------chhhhhhCCCc
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------YSRLASKQEID 116 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------~~~l~~~~~i~ 116 (447)
.+++++|.||++||++|+...|.+.++++.+. .+.+..|+++. +.++++.|++.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCC
Confidence 56899999999999999999999999998875 38999999987 68899999999
Q ss_pred cccEEEEE-eCCeeEEec---CCCCHHHHHHHHHHhc
Q 013240 117 AFPTLKIF-MHGIPTEYY---GPRKAELLVRYLKKFV 149 (447)
Q Consensus 117 ~~Ptl~~~-~~g~~~~y~---g~~~~~~i~~fi~~~~ 149 (447)
++|+++++ .+|+...+. |..+.+.|.+++++++
T Consensus 99 ~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 99 WQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred CCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 99999999 467766788 9999999999998764
No 125
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.44 E-value=7.8e-13 Score=109.21 Aligned_cols=122 Identities=20% Similarity=0.271 Sum_probs=99.9
Q ss_pred hCCCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCC
Q 013240 250 NFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 328 (447)
Q Consensus 250 ~~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~ 328 (447)
.+.|++.++|..++..+...+.|+++.|+.. ....+.+...|+++|+++++ +.|+++|.+++++.++.||+ ...+.
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~--~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi-~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAET--AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNL-KTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSC--SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTC-CSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecC--hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCC-CcccC
Confidence 4689999999999998887788888888754 23446788999999999986 99999999999999999999 45569
Q ss_pred ceEEEEeC-CccceecCCCCCCCcccchhHHHHHHHHHhcCccccccccCC
Q 013240 329 PKMVVWDG-NENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGP 378 (447)
Q Consensus 329 P~vvi~~~-~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~~~ks~p 378 (447)
|++++++. +++.+.+. .++..+.+.|.+|++++++|++++++||+|
T Consensus 80 Ptl~i~~~~~g~~~~~~----~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~ 126 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFD----QEKEITFEAIKAFVDDFVAGKIEPSIKSEP 126 (133)
T ss_dssp SEEEEECTTTCCBCCCC----SSSCCCHHHHHHHHHHHHHTCCCCSSCCCC
T ss_pred CEEEEEecCcCcccCCC----CccccCHHHHHHHHHHHHcCCcCccccCCC
Confidence 99999986 33223332 125667889999999999999999999995
No 126
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.44 E-value=6.5e-14 Score=120.18 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=78.7
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh-hhhhCCC--ccccEEEEE-eC
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR-LASKQEI--DAFPTLKIF-MH 126 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~-l~~~~~i--~~~Ptl~~~-~~ 126 (447)
++|+....++++++|.||++||++|+.+.|.|.++++..... +.|+.||++.+++ ++..+++ .++||+++| .+
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~ 113 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPS 113 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTT
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCchHHHHHhcccCCcCCeEEEECCC
Confidence 667777778899999999999999999999999987655432 5678888888877 8888988 669999999 67
Q ss_pred CeeEE-ecCC----------CCHHHHHHHHHHhc
Q 013240 127 GIPTE-YYGP----------RKAELLVRYLKKFV 149 (447)
Q Consensus 127 g~~~~-y~g~----------~~~~~i~~fi~~~~ 149 (447)
|+.+. +.|. .+.+.|.+++++.+
T Consensus 114 G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 114 GKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp SCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 87664 6664 78888888887764
No 127
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.44 E-value=5.6e-13 Score=109.90 Aligned_cols=88 Identities=18% Similarity=0.285 Sum_probs=77.1
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----------------------chhhhhhCCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----------------------YSRLASKQEI 115 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-----------------------~~~l~~~~~i 115 (447)
.+++++|.||++||++|+...|.+.++++.+. ++.+..|+++. +.++++.|+|
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 99 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC
Confidence 56899999999999999999999999998875 38899999853 5789999999
Q ss_pred ccccEEEEEe-CCeeEEecCCCCHHHHHHHHHHhcC
Q 013240 116 DAFPTLKIFM-HGIPTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 116 ~~~Ptl~~~~-~g~~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
.++|+++++. +|+...+.|..+.++|.+++.+++.
T Consensus 100 ~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 100 TQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred CCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 9999999995 6766688999999999999988764
No 128
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.44 E-value=3.2e-13 Score=99.98 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=64.9
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeCCeeEEecCCC-CHHHH
Q 013240 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPR-KAELL 141 (447)
Q Consensus 63 ~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~-~~~~i 141 (447)
..|.||++||++|+.+.|.++++++.+.. ++.++.|| +++++++|+|.++||+++ +|+.+.. |.. +.++|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~~~~~~l 72 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI---DAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM-GRVASKEEI 72 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC---CEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC-SSCCCHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC---ceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc-CCCCCHHHH
Confidence 35899999999999999999999987653 48899998 789999999999999998 8887666 887 89998
Q ss_pred HHHH
Q 013240 142 VRYL 145 (447)
Q Consensus 142 ~~fi 145 (447)
.+|+
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8875
No 129
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.42 E-value=1.5e-12 Score=108.99 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=86.5
Q ss_pred EEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC----------------------
Q 013240 46 IELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA---------------------- 103 (447)
Q Consensus 46 ~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~---------------------- 103 (447)
..++.+.+.....++++++|.||++||++|+...|.+.++++.+.+. +.+..|++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 56677766665556789999999999999999999999999887652 88899985
Q ss_pred -----ccchhhhhhCCCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 104 -----DKYSRLASKQEIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 104 -----~~~~~l~~~~~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+.+.++++.|+|.++|+++++ .+|+.+. +.|..+.+.+.+++++.+..
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 446789999999999999999 5687665 88999999999999887653
No 130
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.41 E-value=2.2e-12 Score=107.59 Aligned_cols=86 Identities=21% Similarity=0.353 Sum_probs=75.1
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------------chhhhhhC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------------YSRLASKQ 113 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------------------------~~~l~~~~ 113 (447)
.+++++|.||++||++|+...|.+.++++.+... .+.+..|+++. +..+++.|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD--SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS--SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC--CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhc
Confidence 5689999999999999999999999999887632 49999999964 66899999
Q ss_pred CCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHH
Q 013240 114 EIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLK 146 (447)
Q Consensus 114 ~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~ 146 (447)
+|.++|+++++ .+|+.+. +.|..+.+.|.++++
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 111 HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp TCCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred CcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 99999999999 6687664 899999999988863
No 131
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.40 E-value=5.7e-13 Score=123.44 Aligned_cols=84 Identities=20% Similarity=0.311 Sum_probs=68.2
Q ss_pred hhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc------cchhhhhhCCCccccEEEE
Q 013240 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------KYSRLASKQEIDAFPTLKI 123 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~------~~~~l~~~~~i~~~Ptl~~ 123 (447)
...+.+.+++.. +|+||||||+||+++.|.|++++++++ .|||+ +++++|++++|+++||+++
T Consensus 189 ~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~---------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i 257 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII 257 (291)
T ss_dssp HHHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE
T ss_pred HHHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcC---------EEEEeecCchhhHHHHHHHcCCcccCeEEE
Confidence 455667675544 699999999999999999999986542 45665 2789999999999999655
Q ss_pred EeCCeeEEecCCCCHHHHHHHHHHh
Q 013240 124 FMHGIPTEYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 124 ~~~g~~~~y~g~~~~~~i~~fi~~~ 148 (447)
+|+. |.|.++.++|.+|+...
T Consensus 258 --~G~~--~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 258 --NGRT--YTGVRSLEALAVASGYP 278 (291)
T ss_dssp --TTEE--EESCCCHHHHHHHTCCC
T ss_pred --CCEE--ecCCCCHHHHHHHHCCC
Confidence 8864 99999999999998654
No 132
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.40 E-value=2e-12 Score=110.65 Aligned_cols=91 Identities=19% Similarity=0.330 Sum_probs=79.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhC-------------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQ------------------------- 113 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~------------------------- 113 (447)
.+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++..++.++++
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR--GFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT--TEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 5689999999999999999999999999988753 3999999999888777776
Q ss_pred --CCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 114 --EIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 114 --~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
++.++|+++++ .+|+.+. +.|..+.+.+.+++++++..
T Consensus 111 ~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 111 DGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp TTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred ccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999999999 5687764 88999999999999998764
No 133
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.39 E-value=1.9e-11 Score=118.20 Aligned_cols=197 Identities=13% Similarity=0.114 Sum_probs=145.3
Q ss_pred CCeEEeC-hhhHHHhHc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 43 GKVIELD-ESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 43 ~~v~~l~-~~~f~~~~~-~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
..+..|+ .++++++++ +++.++|.|+++||. ...+.|.++|+.+++ .+.|+.++ ++++|+++++. +|+
T Consensus 123 ~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~---~~~f~~~~---~~~~~~~~~v~-~p~ 192 (350)
T 1sji_A 123 DPVEIINSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQP---YIKFFATF---DKGVAKKLSLK-MNE 192 (350)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTT---TSEEEEEC---CHHHHHHHTCC-TTC
T ss_pred CcceeccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhcc---CcEEEEEC---CHHHHHHcCCC-CCc
Confidence 4678885 688999988 778999999999865 456899999998864 38898885 56899999999 999
Q ss_pred EEEEeC--CeeEEecCC-CCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCC-h-------hHHHHH
Q 013240 121 LKIFMH--GIPTEYYGP-RKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E-------SVMSNL 189 (447)
Q Consensus 121 l~~~~~--g~~~~y~g~-~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~-------~~~~~~ 189 (447)
+++|++ +.+..|.|. ++.++|.+|+.....|.+.+++.+ ++..+.+...... .++.|... + ..++.+
T Consensus 193 i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~-~~~~~~~~~~~~~-~~l~f~~~~~~~~~~~~~~~~~v 270 (350)
T 1sji_A 193 VDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPE-DMFETWEDDLNGI-HIVAFAERSDPDGYEFLEILKQV 270 (350)
T ss_dssp EEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTT-THHHHHHSCSSSE-EEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChh-hHHHHhcCCCCCc-EEEEEEcCCCccHHHHHHHHHHH
Confidence 999987 356779997 999999999999999999999865 5667665422122 33445432 2 257788
Q ss_pred HHHhhh--hhHhHHhhcc-chhhh----hhcCCC-CCCeEEEEcCCCCCccc--cc---CCCChHHHHHHHHhhC
Q 013240 190 ALKYKK--KAWFAVAKDF-SEDTM----VLYDFD-KVPALVALQPSYNEHNI--FY---GPFDEEFLEEFIKQNF 251 (447)
Q Consensus 190 a~~~~~--~~~f~~~~~~-~~~~~----~~~~i~-~~P~l~~~~~~~~~~~~--~~---g~~~~~~i~~fI~~~~ 251 (447)
|.++++ ...|..+... ...++ +.||+. ..|++++++........ +. +.++.+.|.+|+....
T Consensus 271 A~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~ 345 (350)
T 1sji_A 271 ARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVL 345 (350)
T ss_dssp HHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHH
T ss_pred HHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHh
Confidence 999986 5555555321 12344 678887 47999999874332222 32 4788999999998754
No 134
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.39 E-value=1.4e-12 Score=111.61 Aligned_cols=105 Identities=16% Similarity=0.212 Sum_probs=85.5
Q ss_pred CeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEE-----------------------
Q 013240 44 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAK----------------------- 100 (447)
Q Consensus 44 ~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~----------------------- 100 (447)
.+..++.+.+......+++++|.||++||++|+...|.+.++++.++..+ +.+..
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS--ANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT--SEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC--cEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 67777777777655667899999999999999999999999998865432 44433
Q ss_pred -----EeCccchhhhhhCCCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 101 -----VDADKYSRLASKQEIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 101 -----Vd~~~~~~l~~~~~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
++++.+.+++++|+|.++|+++++ .+|+.+. +.|..+.+.|.+++++.+.
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 445556789999999999999999 5687664 8899999999999998765
No 135
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.37 E-value=7.2e-12 Score=105.56 Aligned_cols=93 Identities=14% Similarity=0.344 Sum_probs=79.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------chhhhhhCCCc
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------YSRLASKQEID 116 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------~~~l~~~~~i~ 116 (447)
.+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++. +..+++.|+|.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 102 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ--GVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVS 102 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCC
Confidence 4689999999999999999999999999988753 38899999865 45899999999
Q ss_pred cccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcCCCc
Q 013240 117 AFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVAPDV 153 (447)
Q Consensus 117 ~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~~~v 153 (447)
++|+++++ .+|+.+. +.|..+.+.|.+++++++....
T Consensus 103 ~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 103 PLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp SSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred CCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 99999999 5687765 8899999999999999876543
No 136
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.37 E-value=1.7e-11 Score=119.23 Aligned_cols=199 Identities=12% Similarity=0.106 Sum_probs=145.9
Q ss_pred CCeEEeC-hhhHHHhHc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 43 GKVIELD-ESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 43 ~~v~~l~-~~~f~~~~~-~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
..+..++ .++++++++ ++++++|.|+++||+ ...+.|.++|..+.+ .+.|+.++ +.++|++|++++ |+
T Consensus 125 ~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~---~~~F~~~~---~~~~~~~~~v~~-p~ 194 (367)
T 3us3_A 125 DPVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHP---YIPFFATF---DSKVAKKLTLKL-NE 194 (367)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTT---TSCEEEEC---CHHHHHHHTCCT-TC
T ss_pred CCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcC---CcEEEEEC---CHHHHHHcCCCC-Ce
Confidence 4678885 588999998 678999999999865 567889999998865 38888876 468999999996 99
Q ss_pred EEEEeC--CeeEEecCC-CCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCCh--------hHHHHH
Q 013240 121 LKIFMH--GIPTEYYGP-RKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNL 189 (447)
Q Consensus 121 l~~~~~--g~~~~y~g~-~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~--------~~~~~~ 189 (447)
+++|++ +.+..|.|. ++.+.|.+|+.....|.+.+++.+ ++......... .+.++.|.... ..++.+
T Consensus 195 i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~-~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~l~~v 272 (367)
T 3us3_A 195 IDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPE-SMYETWEDDMD-GIHIVAFAEEADPDGYEFLEILKSV 272 (367)
T ss_dssp EEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGG-GHHHHHHSCBT-TEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChh-hHHHHHhhccC-CcEEEEEEcCCChhHHHHHHHHHHH
Confidence 999998 467789995 999999999999999999999865 45555553221 13445555421 157888
Q ss_pred HHHhhh--hhHhHHhhccc-hhh----hhhcCCC-CCCeEEEEcCCCCC--cccccC---CCChHHHHHHHHhhCCC
Q 013240 190 ALKYKK--KAWFAVAKDFS-EDT----MVLYDFD-KVPALVALQPSYNE--HNIFYG---PFDEEFLEEFIKQNFLP 253 (447)
Q Consensus 190 a~~~~~--~~~f~~~~~~~-~~~----~~~~~i~-~~P~l~~~~~~~~~--~~~~~g---~~~~~~i~~fI~~~~~p 253 (447)
|.+|++ ...|..+.... ... ...||+. ..|+++++...... ...+.+ .++.+.|.+|+....-.
T Consensus 273 A~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~G 349 (367)
T 3us3_A 273 AQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEG 349 (367)
T ss_dssp HHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHT
T ss_pred HHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcC
Confidence 999998 45555542211 111 2347887 68999999865432 233443 68999999999886433
No 137
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.36 E-value=6.9e-13 Score=111.40 Aligned_cols=97 Identities=13% Similarity=0.056 Sum_probs=67.8
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-cchhhhhhCCCccccEEEEEe-CCe
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-KYSRLASKQEIDAFPTLKIFM-HGI 128 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-~~~~l~~~~~i~~~Ptl~~~~-~g~ 128 (447)
+.+..+..+++++||.|||+||++|+.+.|.+.+..+..+..+ ..|..|+++ +..+++.++++.++||+++|. +|+
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~ 112 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLT 112 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSC
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCC
Confidence 4455555778999999999999999999999987432211111 224455554 456788999999999999998 787
Q ss_pred eEE-ecCC----------CCHHHHHHHHHHhc
Q 013240 129 PTE-YYGP----------RKAELLVRYLKKFV 149 (447)
Q Consensus 129 ~~~-y~g~----------~~~~~i~~fi~~~~ 149 (447)
.+. ..|. .+.+.+++.+++.+
T Consensus 113 ~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 113 VRADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp BCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EEEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 664 5665 33455666665543
No 138
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.35 E-value=5.9e-12 Score=105.43 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=83.0
Q ss_pred CcccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHh-hcCCCCeEEEEEeCcc------
Q 013240 33 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPIL-AKLKEPIVIAKVDADK------ 105 (447)
Q Consensus 33 ~~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l-~~~~~~v~~~~Vd~~~------ 105 (447)
.++-.....++..+.+++.++ .+++++|.||++||++|+...|.+.++++.+ .+. .+.+..|+++.
T Consensus 11 ~p~~~l~~~~g~~~~l~~~~~-----~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~~ 83 (148)
T 3fkf_A 11 APYFSLPNEKGEKLSRSAERF-----RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK--NFAMLGISLDIDREAWE 83 (148)
T ss_dssp CCCCCEEBTTSCEECTTSTTT-----TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT--TEEEEEEECCSCHHHHH
T ss_pred CCCeEeeCCCCCEEecccccc-----CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC--CeEEEEEECCCCHHHHH
Confidence 344344445566666653333 5689999999999999999999999999988 442 38899998876
Q ss_pred -------------------chhhhhhCCCccccEEEEE-eCCeeEEecCCCCHHHHHHHHHHhcC
Q 013240 106 -------------------YSRLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 106 -------------------~~~l~~~~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
+..+++.|++.++|+++++ .+|+.+.... +.+.+.+++.+++.
T Consensus 84 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~--~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 84 TAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI--QGEALTGKLKELLK 146 (148)
T ss_dssp HHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC--CHHHHHHHHHHHC-
T ss_pred HHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC--CHHHHHHHHHHHHc
Confidence 4589999999999999999 5676654222 88888888887753
No 139
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.34 E-value=5.1e-11 Score=109.56 Aligned_cols=192 Identities=16% Similarity=0.218 Sum_probs=142.4
Q ss_pred CCeEEeC-hhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIELD-ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l~-~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
..|..|+ .+.++++++.++.++|-|+++| |....+.|.++|+.+++. +.|+.+. +.+++++|++.+ |++
T Consensus 6 P~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~---~~F~~~~---~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDN---YRFAHTN---VESLVNEYDDNG-EGI 75 (252)
T ss_dssp CCEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTT---SCEEEEC---CHHHHHHHCSSS-EEE
T ss_pred CCceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccC---cEEEEEC---hHHHHHHhCCCC-CcE
Confidence 4588884 5778888988899999999998 456778999999988653 7888774 577999999997 999
Q ss_pred EEEeCC--------eeEEe-cCCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecC--C--------
Q 013240 122 KIFMHG--------IPTEY-YGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGL--D-------- 182 (447)
Q Consensus 122 ~~~~~g--------~~~~y-~g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~--~-------- 182 (447)
++|+++ ....| .|.++.++|.+|+....-|.+.+++.+ ++..+ ... ++++.|.. .
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~-n~~~~-~~~----~~~v~~~~~~~~~~~~~~~ 149 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTED-NKDLI-QGK----DLLIAYYDVDYEKNAKGSN 149 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTT-THHHH-SSS----SEEEEEECCBTTTBHHHHH
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccc-cHhhh-cCC----CeEEEEeecchhhcchhHH
Confidence 999863 45679 999999999999999999999999866 45554 222 34444431 1
Q ss_pred --hhHHHHHHHHhhhh---hHhHHhhc-cchhhhhhcCC--C--CCCeEEEEcCCCCCcccccCCCChHH--HHHHHHhh
Q 013240 183 --ESVMSNLALKYKKK---AWFAVAKD-FSEDTMVLYDF--D--KVPALVALQPSYNEHNIFYGPFDEEF--LEEFIKQN 250 (447)
Q Consensus 183 --~~~~~~~a~~~~~~---~~f~~~~~-~~~~~~~~~~i--~--~~P~l~~~~~~~~~~~~~~g~~~~~~--i~~fI~~~ 250 (447)
...+.++|.+|++. ..|..+.. .-..++..||+ + ..|.++++... .....+.+.++.+. |.+|+...
T Consensus 150 ~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~-~~ky~~~~~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 150 YWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAK-GEKFVMQEEFSRDGKALERFLQDY 228 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTT-SCEEECCSCCCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCc-CcEecCCcccCcchHHHHHHHHHH
Confidence 12466689999876 65655521 12346778899 3 47999998642 33334567788777 99999876
Q ss_pred C
Q 013240 251 F 251 (447)
Q Consensus 251 ~ 251 (447)
.
T Consensus 229 ~ 229 (252)
T 2h8l_A 229 F 229 (252)
T ss_dssp H
T ss_pred H
Confidence 3
No 140
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.33 E-value=1.5e-12 Score=111.57 Aligned_cols=82 Identities=18% Similarity=0.269 Sum_probs=70.5
Q ss_pred EeChhhHHHhHccCCeEEEEEECCCChhhhhhhHH-H--HHHHHHhhcCCCCeEEEEEeCccchhhhhhC--------CC
Q 013240 47 ELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQ-L--DEAAPILAKLKEPIVIAKVDADKYSRLASKQ--------EI 115 (447)
Q Consensus 47 ~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~-~--~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~--------~i 115 (447)
..+++.|+.+..+++++||.||++||++|+.+.|+ | .++++.+++ ++.+++||.++.+++++.| |+
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~---~fv~ikVD~de~~~l~~~y~~~~q~~~gv 102 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE---AFVSIKVDREERPDIDNIYMTVCQIILGR 102 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH---HCEEEEEETTTCHHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh---cCceeeeCCcccCcHHHHHHHHHHHHcCC
Confidence 34568899999999999999999999999999993 4 567777765 3889999999999999998 99
Q ss_pred ccccEEEEEe-CCeeEE
Q 013240 116 DAFPTLKIFM-HGIPTE 131 (447)
Q Consensus 116 ~~~Ptl~~~~-~g~~~~ 131 (447)
.++|+++++. +|+++.
T Consensus 103 ~g~Pt~v~l~~dG~~v~ 119 (173)
T 3ira_A 103 GGWPLNIIMTPGKKPFF 119 (173)
T ss_dssp CCSSEEEEECTTSCEEE
T ss_pred CCCcceeeECCCCCcee
Confidence 9999999997 677653
No 141
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.33 E-value=8.1e-12 Score=105.31 Aligned_cols=91 Identities=14% Similarity=0.239 Sum_probs=77.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc------------------------chhhhhhCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK------------------------YSRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~------------------------~~~l~~~~~ 114 (447)
++++++|.||++||++|+...|.+.++++.+++ ..+.+..|+++. ..++++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK--GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhC
Confidence 568999999999999999999999999988754 349999999962 356788899
Q ss_pred --CccccEEEEEe-CCeeE-EecCCCCHHHHHHHHHHhcCC
Q 013240 115 --IDAFPTLKIFM-HGIPT-EYYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 115 --i~~~Ptl~~~~-~g~~~-~y~g~~~~~~i~~fi~~~~~~ 151 (447)
+.++|+++++. +|+.. .|.|..+.+.|.+++++....
T Consensus 101 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 101 NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999994 57665 489999999999999988654
No 142
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.32 E-value=4.7e-12 Score=108.43 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=72.2
Q ss_pred EEeChhhHHHhHc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCC---CccccEE
Q 013240 46 IELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQE---IDAFPTL 121 (447)
Q Consensus 46 ~~l~~~~f~~~~~-~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~---i~~~Ptl 121 (447)
..++++.+..+-. ++++++|.|||+||++|+...|.+.++++... ++.|..||.+.+++++.+|. +.++||+
T Consensus 39 ~~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~ 114 (167)
T 1z6n_A 39 NGLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRAEDDLRQRLALERIAIPLV 114 (167)
T ss_dssp HCCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHHHHHTTTTTTCSSCCSSEE
T ss_pred cCCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCCHHHHHHHHHcCCCCcCeE
Confidence 3466666665442 45799999999999999999999999997643 39999999999999999997 9999999
Q ss_pred EEEeCC-eeEEecCCCCH
Q 013240 122 KIFMHG-IPTEYYGPRKA 138 (447)
Q Consensus 122 ~~~~~g-~~~~y~g~~~~ 138 (447)
++|.+| +.....|.+..
T Consensus 115 i~~~~~G~~~~~~g~~p~ 132 (167)
T 1z6n_A 115 LVLDEEFNLLGRFVERPQ 132 (167)
T ss_dssp EEECTTCCEEEEEESSCH
T ss_pred EEECCCCCEEEEEcCCCH
Confidence 999885 66654466553
No 143
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.32 E-value=1.3e-11 Score=104.05 Aligned_cols=91 Identities=20% Similarity=0.353 Sum_probs=79.0
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccch-----------------------hhhhhCCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS-----------------------RLASKQEI 115 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~-----------------------~l~~~~~i 115 (447)
.+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++.+. ++++.|+|
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGK--DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI 106 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS--SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC--CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc
Confidence 4689999999999999999999999999887642 4999999998765 78999999
Q ss_pred ccccEEEEEe-CCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 116 DAFPTLKIFM-HGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 116 ~~~Ptl~~~~-~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
.++|+++++. +|+.+. +.|..+.+.|.+++++....
T Consensus 107 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 107 NGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp CSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 9999999997 687765 67888889999999888654
No 144
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.30 E-value=4.3e-12 Score=99.35 Aligned_cols=77 Identities=14% Similarity=0.105 Sum_probs=69.0
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHH
Q 013240 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELL 141 (447)
Q Consensus 62 ~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i 141 (447)
+.++.|+++||+.|+.+.|.++++++++ + +.+..||.+++++++.+|+++ +|++++|.+|+.+ ..|..+.+.|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~~~~L 102 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---W--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLDSDVI 102 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---C--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCCCHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---C--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCCHHHH
Confidence 6699999999999999999999998764 2 788999999999999999997 9999999999877 4588888888
Q ss_pred HHHH
Q 013240 142 VRYL 145 (447)
Q Consensus 142 ~~fi 145 (447)
.+|+
T Consensus 103 ~~~L 106 (107)
T 2fgx_A 103 GAYL 106 (107)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8886
No 145
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.29 E-value=4.4e-11 Score=100.72 Aligned_cols=91 Identities=18% Similarity=0.320 Sum_probs=76.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccch----------------------hhhhhCCCc
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS----------------------RLASKQEID 116 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~----------------------~l~~~~~i~ 116 (447)
.+++++|.||++||++|+...|.+.++++.+.+.+ +.+..|+++.++ ++++.|++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG--FQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC--eEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC
Confidence 46899999999999999999999999999987643 889999988665 788999999
Q ss_pred cccEEEEE-eCCeeEE-ecCC--CCHHHHHHHHHHhcCC
Q 013240 117 AFPTLKIF-MHGIPTE-YYGP--RKAELLVRYLKKFVAP 151 (447)
Q Consensus 117 ~~Ptl~~~-~~g~~~~-y~g~--~~~~~i~~fi~~~~~~ 151 (447)
++|+++++ .+|+.+. +.|. .+.+.|.+++++....
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 99999998 5687664 7775 4558999999888754
No 146
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.29 E-value=6.8e-12 Score=105.06 Aligned_cols=88 Identities=17% Similarity=0.266 Sum_probs=74.9
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh-------------------------hhhhC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR-------------------------LASKQ 113 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~-------------------------l~~~~ 113 (447)
.+++++|.||++||++|+...|.+.++++.+... .+.+..|+++.+++ +++.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhc
Confidence 5689999999999999999999999999998764 39999999998777 99999
Q ss_pred CCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHh
Q 013240 114 EIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKF 148 (447)
Q Consensus 114 ~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~ 148 (447)
+|.++|+++++ .+|+... +.|..+.+.+.+.+.+.
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 99999999999 5677664 77777777776666554
No 147
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.29 E-value=1.2e-11 Score=104.37 Aligned_cols=91 Identities=16% Similarity=0.214 Sum_probs=77.0
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEe-----------------------CccchhhhhhCCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD-----------------------ADKYSRLASKQEI 115 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd-----------------------~~~~~~l~~~~~i 115 (447)
.+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+ ++.+..+++.|+|
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 104 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT 104 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC
Confidence 5689999999999999999999999999988764 37777665 4457789999999
Q ss_pred ccccEEEEE-eCCeeE-EecCCCCHHHHHHHHHHhcCC
Q 013240 116 DAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 116 ~~~Ptl~~~-~~g~~~-~y~g~~~~~~i~~fi~~~~~~ 151 (447)
.++|+++++ .+|+.+ .|.|..+.+.|.+++++++..
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 105 QVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp CSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred CccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 999999999 567765 489999999999999887643
No 148
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.28 E-value=3.3e-11 Score=99.12 Aligned_cols=87 Identities=22% Similarity=0.393 Sum_probs=73.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC----------------------------ccchhhh
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA----------------------------DKYSRLA 110 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~----------------------------~~~~~l~ 110 (447)
.+++++|.||++||++|+...|.+.++++.+. ..+.+..|++ +.+.+++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAG---DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLL 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT---TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC---CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHH
Confidence 46899999999999999999999999998743 3488888854 3456799
Q ss_pred hhCCCccccEEEEE-eCCeeE-EecCCCCHHHHHHHHHHh
Q 013240 111 SKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 111 ~~~~i~~~Ptl~~~-~~g~~~-~y~g~~~~~~i~~fi~~~ 148 (447)
+.|++.++|+++++ .+|+.. .+.|..+.+++.+++++.
T Consensus 98 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99999999999999 568766 489999999999998764
No 149
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.28 E-value=1.8e-11 Score=103.42 Aligned_cols=87 Identities=21% Similarity=0.269 Sum_probs=77.3
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC---------------------------ccchhhhhhC
Q 013240 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA---------------------------DKYSRLASKQ 113 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~---------------------------~~~~~l~~~~ 113 (447)
++++|.||++||++|+...|.+.++++.+ + +.+..|++ +....+++.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~----v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G----VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C----CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C----CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHh
Confidence 89999999999999999999999999988 2 77888898 4678899999
Q ss_pred CCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcCCC
Q 013240 114 EIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVAPD 152 (447)
Q Consensus 114 ~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~~~ 152 (447)
++.++|+++++ .+|+.+. +.|..+.+.|.++++++....
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred CCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 99999998888 5687664 899999999999999987654
No 150
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.28 E-value=4.9e-12 Score=95.57 Aligned_cols=74 Identities=22% Similarity=0.192 Sum_probs=64.5
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHH
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVR 143 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~ 143 (447)
++.||++||+.|+.+.|.+++++..+ +..||.+++++++++|+++ +|++++ .+|+.+. |..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCCHHHHHH
Confidence 78999999999999999998865321 5889999999999999998 999999 8888774 8889999999
Q ss_pred HHHHhc
Q 013240 144 YLKKFV 149 (447)
Q Consensus 144 fi~~~~ 149 (447)
|+.+.+
T Consensus 71 ~l~~~~ 76 (87)
T 1ttz_A 71 WLDAAP 76 (87)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 997654
No 151
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.27 E-value=4.4e-11 Score=101.62 Aligned_cols=91 Identities=13% Similarity=0.247 Sum_probs=77.0
Q ss_pred cCCeEEEEEECCCChhhhh-hhHHHHHHHHHhhcCCCCeEEEEEeC----------------------------ccchh-
Q 013240 59 SFDYILVDFYAPWCGHCKR-LAPQLDEAAPILAKLKEPIVIAKVDA----------------------------DKYSR- 108 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~-~~p~~~~~a~~l~~~~~~v~~~~Vd~----------------------------~~~~~- 108 (447)
.+++++|.||++||++|+. ..|.+.++++.+.+. .+.+..|++ +....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 106 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREG 106 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTT
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCcccc
Confidence 4689999999999999999 599999999988653 388999986 23334
Q ss_pred -----hhhhCCCccccEEEEEe-CCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 109 -----LASKQEIDAFPTLKIFM-HGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 109 -----l~~~~~i~~~Ptl~~~~-~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+++.|+|.++|+++++. +|+.+. +.|..+.+.+.+++++++..
T Consensus 107 ~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 107 QRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp CSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred chhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 89999999999999996 687664 88999999999999988754
No 152
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.27 E-value=3.6e-11 Score=101.38 Aligned_cols=101 Identities=22% Similarity=0.372 Sum_probs=77.8
Q ss_pred ccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------------
Q 013240 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK------------- 105 (447)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~------------- 105 (447)
...++..+.+.+- .+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++.
T Consensus 15 ~~~~G~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~ 85 (152)
T 2lrn_A 15 IDLKGNSVSLNDF-------KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK--GFTIYGVSTDRREEDWKKAIEEDK 85 (152)
T ss_dssp ECSSSCEEESGGG-------TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT--TEEEEEEECCSCHHHHHHHHHHHT
T ss_pred EcCCCCEEeHHHc-------CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHHHhC
Confidence 3444555555431 4689999999999999999999999999988653 38999999987
Q ss_pred ------------chhhhhhCCCccccEEEEE-eCCeeEEecCCCCHHHHHHHHHHhcC
Q 013240 106 ------------YSRLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 106 ------------~~~l~~~~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
+.++++.|+|.++|+++++ .+|+.+... .+.+++.+++++++.
T Consensus 86 ~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 86 SYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE--LRGDDLYNTVEKFVN 141 (152)
T ss_dssp CCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC--CCTTHHHHHHHHHHT
T ss_pred CCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEee--CCHHHHHHHHHHHHh
Confidence 5789999999999999999 568766522 234567777766654
No 153
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.26 E-value=4.7e-11 Score=99.29 Aligned_cols=106 Identities=17% Similarity=0.291 Sum_probs=79.1
Q ss_pred CcccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHH---HHHHhhcCCCCeEEEEEeCccchhh
Q 013240 33 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDE---AAPILAKLKEPIVIAKVDADKYSRL 109 (447)
Q Consensus 33 ~~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~---~a~~l~~~~~~v~~~~Vd~~~~~~l 109 (447)
.++-.....++..+.+.+- .+++++|.||++||++|+...|.+.+ +.+.+++. .+.+..|+++..++.
T Consensus 7 ~p~f~l~~~~g~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~--~~~~v~v~~d~~~~~ 77 (142)
T 3ewl_A 7 AADFTYVTVHGDNSRMSRL-------KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG--TLRVLAIYPDENREE 77 (142)
T ss_dssp CCCCEEECTTCCEEEGGGC-------CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT--SEEEEEEECSSCHHH
T ss_pred CCCCEEECCCCCEEEhhhc-------CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC--CeEEEEEEecCCHHH
Confidence 3443444455555555431 46899999999999999999999998 88887653 399999999866544
Q ss_pred ------------------------hhhCCCccccEEEEEe-CCeeEEecCCCCHHHHHHHHHHhc
Q 013240 110 ------------------------ASKQEIDAFPTLKIFM-HGIPTEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 110 ------------------------~~~~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~i~~fi~~~~ 149 (447)
++.|+|.++|+++++. +|+.+. +..+.++|.+++++..
T Consensus 78 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~--~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 78 WATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVIL--KDTSMEQLIDYLATQA 140 (142)
T ss_dssp HHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEE--CSCCHHHHHHHHHC--
T ss_pred HHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEe--cCCCHHHHHHHHHHHc
Confidence 4589999999999995 566543 5678889988887654
No 154
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.25 E-value=5.7e-11 Score=100.74 Aligned_cols=91 Identities=12% Similarity=0.198 Sum_probs=76.5
Q ss_pred cCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCCeEEEEEeCc----------------------------cch--
Q 013240 59 SFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIVIAKVDAD----------------------------KYS-- 107 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~-~p~~~~~a~~l~~~~~~v~~~~Vd~~----------------------------~~~-- 107 (447)
.+++++|.||++||++|+.. .|.+.++++.+.+. .+.+..|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED--KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDG 104 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC--CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccch
Confidence 46899999999999999996 99999999988643 3889999863 222
Q ss_pred ---hhhhhCCCccccEEEEEe-CCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 108 ---RLASKQEIDAFPTLKIFM-HGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 108 ---~l~~~~~i~~~Ptl~~~~-~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
.+++.|++.++|+++++. +|+.+. +.|..+.+.|.+++++++..
T Consensus 105 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 105 AMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred hhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 589999999999999994 687664 88999999999999988753
No 155
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.24 E-value=1.7e-11 Score=105.30 Aligned_cols=102 Identities=15% Similarity=0.233 Sum_probs=78.2
Q ss_pred CCCeEEe--ChhhHHHh-HccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEe----------------
Q 013240 42 DGKVIEL--DESNFDSA-ISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD---------------- 102 (447)
Q Consensus 42 ~~~v~~l--~~~~f~~~-~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd---------------- 102 (447)
+-.+..+ +.+.+... +.++++++|.||++||++|+...|.+.++++. .+.+..|+
T Consensus 30 ~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~v~~~~~~~~~~~~~~~~~ 103 (168)
T 2b1k_A 30 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ------GIRVVGMNYKDDRQKAISWLKELG 103 (168)
T ss_dssp CCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCCEEEEEESCCHHHHHHHHHHHC
T ss_pred CeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC------CCEEEEEECCCChHHHHHHHHHcC
Confidence 3455555 44444332 34678999999999999999999999998864 26667777
Q ss_pred -------CccchhhhhhCCCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 103 -------ADKYSRLASKQEIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 103 -------~~~~~~l~~~~~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++.+.++++.|+|.++|+.+++ .+|+... +.|..+.+.+.+++++.+
T Consensus 104 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 104 NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp CCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred CCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 4556789999999999966655 5687764 889999999998887764
No 156
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.22 E-value=6.2e-11 Score=100.66 Aligned_cols=90 Identities=26% Similarity=0.468 Sum_probs=73.5
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------chhhhhhCCCcccc
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------YSRLASKQEIDAFP 119 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------------------~~~l~~~~~i~~~P 119 (447)
++++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++. +.++++.|++.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG--DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT--SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC--CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcc
Confidence 5689999999999999999999999999988643 49999999987 68999999999999
Q ss_pred EEEEE-eCCeeEE-ecCCC--CHHHHHHHHHHhcC
Q 013240 120 TLKIF-MHGIPTE-YYGPR--KAELLVRYLKKFVA 150 (447)
Q Consensus 120 tl~~~-~~g~~~~-y~g~~--~~~~i~~fi~~~~~ 150 (447)
+++++ .+|+... +.|.. +..++++.+.+...
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC-
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcc
Confidence 98888 5677664 77764 45666666665543
No 157
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.22 E-value=2.6e-11 Score=102.50 Aligned_cols=86 Identities=21% Similarity=0.300 Sum_probs=71.1
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC-----------------------ccchhhhhhCCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-----------------------DKYSRLASKQEI 115 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~-----------------------~~~~~l~~~~~i 115 (447)
.+++++|.||++||++|+...|.+.++++. +++.+..|++ +.+..+++.|++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 115 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV 115 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc
Confidence 468999999999999999999999998764 2377777775 345678999999
Q ss_pred ccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 116 DAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 116 ~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
.++|+++++ .+|+.+. +.|..+.+.+.+++.+.+
T Consensus 116 ~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 116 YGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp CSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred CccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 999977776 5687665 889999999998887764
No 158
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.20 E-value=5.6e-11 Score=101.66 Aligned_cols=86 Identities=20% Similarity=0.246 Sum_probs=74.5
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc------------------cc--------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------------------KY-------------- 106 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~------------------~~-------------- 106 (447)
..++++|.||++||++|+...|.+.++++.+. ++.|..|+++ ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDP 111 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCC
Confidence 56899999999999999999999999998876 3999999998 34
Q ss_pred --------hhhhhhCCCccccEEEEEe-CCeeEEecCCC-CHHHHHHHHHHhc
Q 013240 107 --------SRLASKQEIDAFPTLKIFM-HGIPTEYYGPR-KAELLVRYLKKFV 149 (447)
Q Consensus 107 --------~~l~~~~~i~~~Ptl~~~~-~g~~~~y~g~~-~~~~i~~fi~~~~ 149 (447)
.++++.|+|.++|+++++. +|+... .|.. +.+.|.+++++++
T Consensus 112 ~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 112 SWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp TSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC-
T ss_pred CeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHh
Confidence 3889999999999999995 576666 8888 8999999988765
No 159
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.20 E-value=7.5e-11 Score=102.78 Aligned_cols=92 Identities=11% Similarity=0.239 Sum_probs=75.8
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCC----CCeEEEEEeCcc-chhhhhhC--------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLK----EPIVIAKVDADK-YSRLASKQ-------------------- 113 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~----~~v~~~~Vd~~~-~~~l~~~~-------------------- 113 (447)
..++++|.||++||++|+...|.+.++++.+.+.+ +++.|..|+++. +++.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 46899999999999999999999999999987643 133999999988 66655554
Q ss_pred -----CCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 114 -----EIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 114 -----~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
++.++|+++++ .+|+.+. |.|..+.+.|.+++++++.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 68999987777 5687764 8899999999999988753
No 160
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.20 E-value=1.4e-10 Score=97.84 Aligned_cols=108 Identities=19% Similarity=0.395 Sum_probs=81.2
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-------
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------- 106 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~------- 106 (447)
++-.....++..+.+.+ -.+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++.+
T Consensus 9 p~~~l~~~~g~~~~l~~-------~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~ 79 (154)
T 3kcm_A 9 PDFTLNTLNGEVVKLSD-------LKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK--PFRMLCVSIDEGGKVAVEE 79 (154)
T ss_dssp CCCEEECTTSCEEEGGG-------GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS--SEEEEEEECCTTHHHHHHH
T ss_pred CCeEEEcCCCCEEehhh-------cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEEcCCcchHHHHH
Confidence 33333444455555432 15689999999999999999999999999988653 488999998875
Q ss_pred ----------------hhhhhhCCCccccEEEEE-eCCeeEE-ecCCC--CHHHHHHHHHHhcC
Q 013240 107 ----------------SRLASKQEIDAFPTLKIF-MHGIPTE-YYGPR--KAELLVRYLKKFVA 150 (447)
Q Consensus 107 ----------------~~l~~~~~i~~~Ptl~~~-~~g~~~~-y~g~~--~~~~i~~fi~~~~~ 150 (447)
..+++.|++.++|+++++ .+|+.+. +.|.. +.+.+.++++++..
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 80 FFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp HHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred HHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 448899999999977777 5687664 77765 66788888887654
No 161
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.20 E-value=7.6e-11 Score=98.18 Aligned_cols=83 Identities=17% Similarity=0.227 Sum_probs=67.1
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHH---HHHHhhcCCCCeEEEEEeCccchh------------------------hhhh
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDE---AAPILAKLKEPIVIAKVDADKYSR------------------------LASK 112 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~---~a~~l~~~~~~v~~~~Vd~~~~~~------------------------l~~~ 112 (447)
.++++|.||++||++|+...|.+.+ +.+.+++. .+.+..|+.+...+ +++.
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~--~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK--KLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNL 108 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT--SEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC--CeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhh
Confidence 4899999999999999999999999 89888753 48899999987643 4788
Q ss_pred CCCccccEEEEEeC-CeeEEecCCCCHHHHHHHHH
Q 013240 113 QEIDAFPTLKIFMH-GIPTEYYGPRKAELLVRYLK 146 (447)
Q Consensus 113 ~~i~~~Ptl~~~~~-g~~~~y~g~~~~~~i~~fi~ 146 (447)
|+|.++|+++++.. |+.+. .+ .+.++|.+|++
T Consensus 109 ~~v~~~P~~~lid~~G~i~~-~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 109 YDLRAIPTLYLLDKNKTVLL-KD-ATLQKVEQYLA 141 (142)
T ss_dssp SCCTTCSEEEEECTTCBEEE-EE-ECHHHHHHHHH
T ss_pred cCCCcCCeEEEECCCCcEEe-cC-CCHHHHHHHHh
Confidence 99999999999965 65543 22 24677877775
No 162
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.17 E-value=6.2e-10 Score=102.11 Aligned_cols=192 Identities=14% Similarity=0.101 Sum_probs=139.2
Q ss_pred CCeEEeCh-hhHHHhHcc-CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccE
Q 013240 43 GKVIELDE-SNFDSAISS-FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (447)
Q Consensus 43 ~~v~~l~~-~~f~~~~~~-~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Pt 120 (447)
..|..|++ ++++++++. ++.++|-|+.++| ....+.|.++|+.+++. +.|+.+. +.++++++++.+ |+
T Consensus 6 P~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~---~~F~~t~---~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLRED---YKFHHTF---STEIAKFLKVSL-GK 75 (250)
T ss_dssp CSSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTT---CCEEEEC---CHHHHHHHTCCS-SE
T ss_pred CCceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcC---cEEEEEC---cHHHHHHcCCCC-Ce
Confidence 45778854 889999988 8999999999974 57889999999998653 8888764 678999999998 99
Q ss_pred EEEEeC--------CeeEEec--CCCCHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecC-C-----h-
Q 013240 121 LKIFMH--------GIPTEYY--GPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGL-D-----E- 183 (447)
Q Consensus 121 l~~~~~--------g~~~~y~--g~~~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~-~-----~- 183 (447)
+++|++ .....|. |.++.++|.+|+.....|.+.+++.+ ++..... . .+.++.|.. + .
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~-n~~~~~~-~---~~l~~~~~~~d~~~~~~~ 150 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTS-NDAKRYS-K---RPLVVVYYSVDFSFDYRT 150 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTT-THHHHSC-S---SSEEEEEECCCCSTTTHH
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCcc-chhhhhc-c---CccEEEEEecccccccch
Confidence 999985 3456788 58999999999999999999999866 4544442 2 234444331 1 1
Q ss_pred ------hHHHHHHHHhhhhhHhHHhhcc-chhhhhhcCCCC--C-CeEEEEcCCCCCccccc-CCCChHHHHHHHHhhC
Q 013240 184 ------SVMSNLALKYKKKAWFAVAKDF-SEDTMVLYDFDK--V-PALVALQPSYNEHNIFY-GPFDEEFLEEFIKQNF 251 (447)
Q Consensus 184 ------~~~~~~a~~~~~~~~f~~~~~~-~~~~~~~~~i~~--~-P~l~~~~~~~~~~~~~~-g~~~~~~i~~fI~~~~ 251 (447)
..++++|.+|+ ...|..+... ....+..||+.. . |.++++.. .+....+. +.++.+.|.+|+....
T Consensus 151 ~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 151 ATQFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDE-SGKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECT-TSCEEECCCCSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcC-CCceecCCcccCCHHHHHHHHHHHH
Confidence 24677888888 6666655211 123566788864 3 57777653 23333344 6789999999998763
No 163
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.4e-09 Score=102.43 Aligned_cols=204 Identities=17% Similarity=0.261 Sum_probs=139.7
Q ss_pred CCCceecCChhHHHHHHHhcCCcccEEEeecCC-hh-------HHHHHHHHhhhhhHhHHhh-c--cchhhhhhcCCCCC
Q 013240 150 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-ES-------VMSNLALKYKKKAWFAVAK-D--FSEDTMVLYDFDKV 218 (447)
Q Consensus 150 ~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~~-------~~~~~a~~~~~~~~f~~~~-~--~~~~~~~~~~i~~~ 218 (447)
.+.+.+++ .+++++.+.... .+++|.|+.. +. .+.+++..+.+...++.+. + ...+++.+|++.++
T Consensus 16 ~~~vv~lt-~~~f~~~i~~~~--~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 16 DPHISELT-PKSFDKAIHNTN--YTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp CTTCEECC-HHHHHHHHTSSS--SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCeEEeC-HHHHHHHHHhCC--CeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 45677885 568999985432 3677777654 33 4666677776644444332 1 35678999999999
Q ss_pred CeEEEEcCCC----------------CCcccccCCCChHHHHHHHHhhCCCCcccc-ChhhHHhhhcCC-CcEEEEEEeC
Q 013240 219 PALVALQPSY----------------NEHNIFYGPFDEEFLEEFIKQNFLPLSVPI-NQDTLNLLKDDK-RKIVLAIVED 280 (447)
Q Consensus 219 P~l~~~~~~~----------------~~~~~~~g~~~~~~i~~fI~~~~~p~~~~l-~~~~~~~~~~~~-~~~vl~~~~~ 280 (447)
|++++|+++. .....|.|..+.+.|.+|+.+...+.+..+ +.+.++.+.... .+.+++| ..
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~f-s~ 171 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLF-SK 171 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEE-ES
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEE-cC
Confidence 9999998753 125678999999999999999988888877 457788776654 5566555 33
Q ss_pred CChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHH--hhcCC---------------CCCCCCceEEEEeCC-ccce
Q 013240 281 ETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFA--DTFEA---------------NKKSKLPKMVVWDGN-ENYL 341 (447)
Q Consensus 281 ~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~--~~~~i---------------~~~~~~P~vvi~~~~-~~y~ 341 (447)
.+. ....++.+|..+++ +.|+.++..+-.... +.|+. +.....|++++++.. +++.
T Consensus 172 ~~~-----~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 172 QDK-----ISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp SSS-----CCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred CCc-----chHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 222 12478889999976 999999865322222 22221 012568999999884 5666
Q ss_pred ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 342 TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 342 ~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
.+.| +.++.+.|.+||.+-.+
T Consensus 247 ~y~g-----~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 247 EYEG-----NSINKNDISKFLRDTFS 267 (298)
T ss_dssp ECCC-----SSCCHHHHHHHHHHHHT
T ss_pred Eecc-----ccCCHHHHHHHHHhhcC
Confidence 6654 34678899999986544
No 164
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.16 E-value=3.9e-10 Score=94.71 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=82.1
Q ss_pred CCcccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChh--hhhhhHHHHHHHHHh-hcCCCCeEEEEEeCccch-
Q 013240 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGH--CKRLAPQLDEAAPIL-AKLKEPIVIAKVDADKYS- 107 (447)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~--C~~~~p~~~~~a~~l-~~~~~~v~~~~Vd~~~~~- 107 (447)
..++-.....++..+.|++.++ .+++++|.||++||++ |+...|.+.++.+.+ ++. .+.+..|+++..+
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~~-----~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~ 82 (150)
T 3fw2_A 10 YAPFFSLPNAKGEKITRSSDAF-----KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK--YIGMLGISLDVDKQ 82 (150)
T ss_dssp BCCCCCEEBTTCCEECTTSTTT-----TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS--SEEEEEEECCSCHH
T ss_pred cCCccEeECCCCCEEecchhhh-----CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC--CeEEEEEEcCCCHH
Confidence 3344444455566665553233 4589999999999999 999999999999988 442 3999999998664
Q ss_pred ------------------------hhhhhCCCccccEEEEE-eCCeeEEecCCCCHHHHHHHHHHhc
Q 013240 108 ------------------------RLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 108 ------------------------~l~~~~~i~~~Ptl~~~-~~g~~~~y~g~~~~~~i~~fi~~~~ 149 (447)
++++.|++.++|+++++ ++|+.+... .+.+.+.+.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 83 QWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN--LRGEELKKKIENIV 147 (150)
T ss_dssp HHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEcc--CCHHHHHHHHHHHH
Confidence 78999999999999999 457665432 27778887777654
No 165
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.16 E-value=3.8e-10 Score=95.15 Aligned_cols=84 Identities=12% Similarity=0.047 Sum_probs=70.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh-----------------------hhhhCCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR-----------------------LASKQEI 115 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~-----------------------l~~~~~i 115 (447)
.+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++...+ +++.|++
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc
Confidence 3589999999999999999999999999998764 38999999987654 8889999
Q ss_pred ccccEEEEEe-CCeeEE-ecCCCCHHHHHHH
Q 013240 116 DAFPTLKIFM-HGIPTE-YYGPRKAELLVRY 144 (447)
Q Consensus 116 ~~~Ptl~~~~-~g~~~~-y~g~~~~~~i~~f 144 (447)
.++|+++++. +|+.+. +.|..+.++...-
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 9999999995 687765 7788776655443
No 166
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.13 E-value=1.9e-10 Score=95.98 Aligned_cols=72 Identities=19% Similarity=0.267 Sum_probs=62.0
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~------------------------~~l~~~~~ 114 (447)
.+++++|.||++||++|+...|.+.++++.+.+. ..+.+..|+++.. .+++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC
Confidence 4689999999999999999999999999988741 2488999998763 57899999
Q ss_pred CccccEEEEEe--CCeeEE
Q 013240 115 IDAFPTLKIFM--HGIPTE 131 (447)
Q Consensus 115 i~~~Ptl~~~~--~g~~~~ 131 (447)
|.++|+++++. +|+.+.
T Consensus 106 v~~~P~~~lid~~~G~i~~ 124 (144)
T 1i5g_A 106 VKSIPTLVGVEADSGNIIT 124 (144)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCcEEe
Confidence 99999999997 677665
No 167
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.11 E-value=2.3e-10 Score=95.70 Aligned_cols=72 Identities=19% Similarity=0.283 Sum_probs=61.8
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~------------------------~~l~~~~~ 114 (447)
.+++++|.||++||++|+...|.+.++++.+.+. ..+.+..|+++.. .+++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC
Confidence 4689999999999999999999999999988731 2488899998763 57899999
Q ss_pred CccccEEEEEe--CCeeEE
Q 013240 115 IDAFPTLKIFM--HGIPTE 131 (447)
Q Consensus 115 i~~~Ptl~~~~--~g~~~~ 131 (447)
|.++|+++++. +|+.+.
T Consensus 106 v~~~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 106 VESIPTLIGVDADSGDVVT 124 (146)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCeEEE
Confidence 99999999998 677665
No 168
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.10 E-value=1.2e-09 Score=95.27 Aligned_cols=92 Identities=20% Similarity=0.407 Sum_probs=74.8
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-----hhhhhhCCCc-----------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-----SRLASKQEID----------------- 116 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-----~~l~~~~~i~----------------- 116 (447)
.+++++|.||++||++|+...|.+.++.+.+... .+.+..|+++.. .++++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 136 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP--NFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLK 136 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT--TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC--CcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhc
Confidence 4689999999999999999999999999988642 488999999865 5677888875
Q ss_pred ------cccEEEEE-eCCeeEE-ecCCCC--HHHHHHHHHHhcCCC
Q 013240 117 ------AFPTLKIF-MHGIPTE-YYGPRK--AELLVRYLKKFVAPD 152 (447)
Q Consensus 117 ------~~Ptl~~~-~~g~~~~-y~g~~~--~~~i~~fi~~~~~~~ 152 (447)
++|+++++ .+|+.+. |.|... .+++.+++++++...
T Consensus 137 ~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 137 AIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp TTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred cccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 89999999 5687664 778764 788999998887643
No 169
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.09 E-value=2.4e-10 Score=95.21 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=62.5
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~------------------------~~l~~~~~ 114 (447)
.+++++|.||++||++|+...|.+.++++.+++. ..+.+..|+++.. .+++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 4689999999999999999999999999988631 2488888988763 46899999
Q ss_pred CccccEEEEEe--CCeeEEec
Q 013240 115 IDAFPTLKIFM--HGIPTEYY 133 (447)
Q Consensus 115 i~~~Ptl~~~~--~g~~~~y~ 133 (447)
|.++|+++++. +|+.+...
T Consensus 106 v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 106 VESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CCSSSEEEEEETTTCCEEESC
T ss_pred CCCCCEEEEEECCCCeEEecc
Confidence 99999999998 67766543
No 170
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.09 E-value=3.1e-10 Score=98.24 Aligned_cols=85 Identities=20% Similarity=0.310 Sum_probs=70.5
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC-----------------------ccchhhhhhCCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-----------------------DKYSRLASKQEI 115 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~-----------------------~~~~~l~~~~~i 115 (447)
.+++++|.||++||++|+...|.+.++++. .+.+..|++ +.+..+++.|++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 130 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGV 130 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCC
Confidence 468999999999999999999999998874 277777774 445678899999
Q ss_pred ccccEEEEEe-CCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 116 DAFPTLKIFM-HGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 116 ~~~Ptl~~~~-~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
.++|+++++. +|+... +.|..+.+.+.+++.+.+
T Consensus 131 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 131 YGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp CSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred CCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9999888884 577664 889999999988887765
No 171
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.08 E-value=6.5e-10 Score=106.54 Aligned_cols=89 Identities=13% Similarity=0.233 Sum_probs=76.8
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc---------------------------chhhhh
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------------------------YSRLAS 111 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~---------------------------~~~l~~ 111 (447)
..++++|.||++||++|+...|.+.++++.++.. .+.+..|+|+. +.++++
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~--~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS--GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWT 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC--CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHH
Confidence 4689999999999999999999999999998763 38899998752 357899
Q ss_pred hCCCccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 112 KQEIDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 112 ~~~i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
.|+|.++|+++++ .+|+.+. +.|..+.+.+.+++++++
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9999999999999 5687765 889999999999988775
No 172
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.07 E-value=4.2e-10 Score=96.31 Aligned_cols=72 Identities=25% Similarity=0.336 Sum_probs=62.1
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~------------------------~~l~~~~~ 114 (447)
.+++++|.||++||++|+...|.+.++++.+++. ..+.+..|+++.. .++++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC
Confidence 4689999999999999999999999999998752 2488888888776 68999999
Q ss_pred CccccEEEEEeC--CeeEE
Q 013240 115 IDAFPTLKIFMH--GIPTE 131 (447)
Q Consensus 115 i~~~Ptl~~~~~--g~~~~ 131 (447)
|.++|+++++.. |+.+.
T Consensus 126 v~~~Pt~~lid~~~G~iv~ 144 (165)
T 3s9f_A 126 VESIPTLIGLNADTGDTVT 144 (165)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEeCCCCEEEe
Confidence 999999999983 66654
No 173
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.62 E-value=2e-11 Score=101.64 Aligned_cols=78 Identities=27% Similarity=0.409 Sum_probs=63.6
Q ss_pred CC-eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-------------------------hhhhhhC
Q 013240 60 FD-YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-------------------------SRLASKQ 113 (447)
Q Consensus 60 ~~-~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-------------------------~~l~~~~ 113 (447)
++ +++|.||++||++|+...|.+.++++.++..+..+.+..|+++.. .++++.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 35 999999999999999999999999988854333577888888755 3789999
Q ss_pred CCccccEEEEEe-CCeeEEecCCCC
Q 013240 114 EIDAFPTLKIFM-HGIPTEYYGPRK 137 (447)
Q Consensus 114 ~i~~~Ptl~~~~-~g~~~~y~g~~~ 137 (447)
+|.++|+++++. +|+.+...|...
T Consensus 105 ~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 105 GITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 999999999997 687766555443
No 174
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.03 E-value=1.8e-09 Score=94.91 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=74.3
Q ss_pred ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-----------------------------cchh
Q 013240 58 SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-----------------------------KYSR 108 (447)
Q Consensus 58 ~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-----------------------------~~~~ 108 (447)
..+.+++|.||++||++|+...|.+.++++.+.+. .+.+..|+++ .+.+
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQE 121 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchH
Confidence 34346999999999999999999999999988764 3888999983 4567
Q ss_pred hhhhCCCccccEEEEEe-CCeeEE----------ecCCCCHHHHHHHHHHhcC
Q 013240 109 LASKQEIDAFPTLKIFM-HGIPTE----------YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 109 l~~~~~i~~~Ptl~~~~-~g~~~~----------y~g~~~~~~i~~fi~~~~~ 150 (447)
+++.|++.++|+++++. +|+.+. +.|..+.++|.+.+++++.
T Consensus 122 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 122 VAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp HHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 89999999999999995 576553 2466788889888887764
No 175
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.02 E-value=5e-10 Score=87.18 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=66.2
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhCCCccccEEEEEeCCeeEEecCCCC
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRK 137 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~--~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~ 137 (447)
..+.++.|+++||++|+.+.|.+++++. .+.+..||.+ ++++++++|| .++|++ +.+|+.. ..|..+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~-------~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~~ 83 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD-------RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRVN 83 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS-------SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSCC
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh-------CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCCC
Confidence 4678999999999999999999887542 2889999998 7899999999 999986 4678765 456688
Q ss_pred HHHHHHHHHHhcC
Q 013240 138 AELLVRYLKKFVA 150 (447)
Q Consensus 138 ~~~i~~fi~~~~~ 150 (447)
.+.|.+++.+.+.
T Consensus 84 ~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 84 TSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHh
Confidence 8999999987654
No 176
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.01 E-value=2.1e-09 Score=93.89 Aligned_cols=90 Identities=13% Similarity=0.084 Sum_probs=71.9
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC-----------------------------ccchhh
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-----------------------------DKYSRL 109 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~-----------------------------~~~~~l 109 (447)
..++++|.||++||++|+...|.+.++++.+.+. +.+..|++ +.+.++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 108 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEV 108 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchH
Confidence 4589999999999999999999999999987642 88999998 345678
Q ss_pred hhhCCCccccEEEEEe-CCeeEEe---------cCCCCHHHHHHHHHHhcCC
Q 013240 110 ASKQEIDAFPTLKIFM-HGIPTEY---------YGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 110 ~~~~~i~~~Ptl~~~~-~g~~~~y---------~g~~~~~~i~~fi~~~~~~ 151 (447)
++.|++.++|+++++. +|+.+.. .|..+.++|.+.+++++..
T Consensus 109 ~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 109 AKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp HHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred HHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 9999999999999995 5665432 1233677888888777653
No 177
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.01 E-value=2.1e-10 Score=91.98 Aligned_cols=87 Identities=21% Similarity=0.296 Sum_probs=61.7
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-----hhhhhhCCCccccEEEEEe
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-----SRLASKQEIDAFPTLKIFM 125 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-----~~l~~~~~i~~~Ptl~~~~ 125 (447)
+.++++++. +++++ ||++||++|+.+.|.+.+++.. +.+..||.+.+ ..++++|++.++|++ |.
T Consensus 11 ~~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~-------~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~ 79 (116)
T 2e7p_A 11 KKAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS-------YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FI 79 (116)
T ss_dssp HHHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC-------CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC-------eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 345566654 45555 9999999999999999887532 45566666554 569999999999999 56
Q ss_pred CCeeEE-ecCCC---CHHHHHHHHHHh
Q 013240 126 HGIPTE-YYGPR---KAELLVRYLKKF 148 (447)
Q Consensus 126 ~g~~~~-y~g~~---~~~~i~~fi~~~ 148 (447)
+|+.+. +.|.. +.+.|.+++.+.
T Consensus 80 ~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 80 GGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp TTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred CCEEECChHHHHHHHhCChHHHHHHHc
Confidence 887664 55543 445566666553
No 178
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.00 E-value=2.2e-09 Score=90.01 Aligned_cols=95 Identities=14% Similarity=0.234 Sum_probs=74.1
Q ss_pred hhHHHhH----ccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeCcc--chhhhhhCCCccccEE
Q 013240 51 SNFDSAI----SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADK--YSRLASKQEIDAFPTL 121 (447)
Q Consensus 51 ~~f~~~~----~~~~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~~~--~~~l~~~~~i~~~Ptl 121 (447)
.+|++++ ++++++||+||++||..|+.+.... .++++.++. .+.+.++|.+. ...++++|++.++|++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~---~fv~v~~d~~~~~~~~l~~~y~v~~~P~~ 105 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE---HFIFWQVYHDSEEGQRYIQFYKLGDFPYV 105 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH---TEEEEEEESSSHHHHHHHHHHTCCSSSEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc---CeEEEEEecCCHhHHHHHHHcCCCCCCEE
Confidence 4566665 5679999999999999999997665 566666644 28889999864 4568999999999999
Q ss_pred EEEeC--CeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 122 KIFMH--GIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 122 ~~~~~--g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+++.. |+.+. +.| .+++++.+++.+.+
T Consensus 106 ~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 106 SILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp EEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred EEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 99965 54443 555 89999988887764
No 179
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.97 E-value=3.5e-09 Score=107.67 Aligned_cols=97 Identities=13% Similarity=0.215 Sum_probs=82.0
Q ss_pred eEEeChhhHHHhHc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEE
Q 013240 45 VIELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (447)
Q Consensus 45 v~~l~~~~f~~~~~-~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~ 123 (447)
-..++++.++.+.+ ..++.++.||++||++|+.+.|.+++++.... ++.+.+||.+.+++++++|+|.++|++++
T Consensus 101 ~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~~~~~~~~~i~svPt~~i 176 (521)
T 1hyu_A 101 PSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTFQNEITERNVMGVPAVFV 176 (521)
T ss_dssp CCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhhHHHHHHhCCCccCEEEE
Confidence 34567787777753 34677899999999999999999999987643 49999999999999999999999999977
Q ss_pred EeCCeeEEecCCCCHHHHHHHHHHh
Q 013240 124 FMHGIPTEYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 124 ~~~g~~~~y~g~~~~~~i~~fi~~~ 148 (447)
+|+.+. .|..+.+.|.+|+.+.
T Consensus 177 --~g~~~~-~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 177 --NGKEFG-QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp --TTEEEE-ESCCCHHHHHHHHCCS
T ss_pred --CCEEEe-cCCCCHHHHHHHHhhc
Confidence 887664 4999999999998664
No 180
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.97 E-value=3.5e-09 Score=94.99 Aligned_cols=88 Identities=15% Similarity=0.163 Sum_probs=70.4
Q ss_pred CC-eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC-----------------------------ccchhh
Q 013240 60 FD-YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-----------------------------DKYSRL 109 (447)
Q Consensus 60 ~~-~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~-----------------------------~~~~~l 109 (447)
.+ +++|.||++||++|+...|.+.++++.+++.+ +.+..|++ +.+.++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~ 135 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQG--LAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSV 135 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTT--EEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCC--cEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHH
Confidence 35 59999999999999999999999999987643 88999998 345689
Q ss_pred hhhCCCccccEEEEEe-CCeeEEecCC-----------CCHHHHHHHHHHhcC
Q 013240 110 ASKQEIDAFPTLKIFM-HGIPTEYYGP-----------RKAELLVRYLKKFVA 150 (447)
Q Consensus 110 ~~~~~i~~~Ptl~~~~-~g~~~~y~g~-----------~~~~~i~~fi~~~~~ 150 (447)
++.|++.++|+++++. +|+.+ |.|. .+.++|.+.+++++.
T Consensus 136 ~~~~~v~~~P~~~liD~~G~i~-~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 136 AKAYGAACTPDFFLYDRERRLV-YHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHHHTCCEESEEEEECTTCBEE-EEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred HHHcCCCCCCeEEEECCCCcEE-EeccccccccccccccCHHHHHHHHHHHHc
Confidence 9999999999999995 56554 5543 345677777766654
No 181
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.95 E-value=3.2e-09 Score=88.32 Aligned_cols=84 Identities=19% Similarity=0.199 Sum_probs=66.2
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc--------------------------hhhhhh
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY--------------------------SRLASK 112 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~--------------------------~~l~~~ 112 (447)
.+++++|.||++||++|+...|.+.++.+.+++. .+.+..|+++.+ .++++.
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 108 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKK 108 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHH
Confidence 4589999999999999999999999999887643 488898988743 257788
Q ss_pred CCCccccEEEEEe-CCeeEEecCCCCHHHHHHHHH
Q 013240 113 QEIDAFPTLKIFM-HGIPTEYYGPRKAELLVRYLK 146 (447)
Q Consensus 113 ~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~i~~fi~ 146 (447)
|+|.++|+.+++. +|+.+.. + ...+++.++++
T Consensus 109 ~~v~~~P~~~lid~~G~i~~~-~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 109 YDLRKGFKNFLINDEGVIIAA-N-VTPEKLTEILK 141 (143)
T ss_dssp TTGGGCCCEEEECTTSBEEEE-S-CCHHHHHHHHT
T ss_pred cCCCCCCcEEEECCCCEEEEc-c-CCHHHHHHHHH
Confidence 9999999999997 5765542 2 24566666654
No 182
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.94 E-value=5.1e-10 Score=83.26 Aligned_cols=62 Identities=23% Similarity=0.290 Sum_probs=49.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-cchhhhhhCCCccccEEEEEeCCeeE
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-KYSRLASKQEIDAFPTLKIFMHGIPT 130 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-~~~~l~~~~~i~~~Ptl~~~~~g~~~ 130 (447)
++.||++||++|+.+.|.++++++.. +.++.+..||.+ .+.++++++|+.++|++++ +|+..
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE
Confidence 67899999999999999999887543 223555555554 5788999999999999987 77754
No 183
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.90 E-value=2.5e-08 Score=97.39 Aligned_cols=191 Identities=11% Similarity=0.128 Sum_probs=113.8
Q ss_pred CeEEeCh-hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 44 KVIELDE-SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 44 ~v~~l~~-~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
.+..+++ ++++. +..++.++|.|++++|..+ .+.|.++|..+++. +.|+.+.+ ++++++++.++| ++
T Consensus 119 ~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~---~~~f~~~A~~~~~~---~~F~~~~~----~~~~~~~v~~~p-i~ 186 (382)
T 2r2j_A 119 PIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDN---YRVFERVANILHDD---CAFLSAFG----DVSKPERYSGDN-II 186 (382)
T ss_dssp CCEEC-------------CCEEEEEESCSSSHH---HHHHHHHHHHHTTT---CEEEEEES----CC--------CE-EE
T ss_pred CceecCCHHHHHH-hcCCCCEEEEEECCCCChh---HHHHHHHHHHhhcc---ceEEEEeh----hhHHhhCCCCCc-eE
Confidence 4566643 56777 6777899999999986544 67899999988653 78888887 468889999999 55
Q ss_pred EEeCC---eeEEecCCC-CHHHHHHHHHHhcCCCceecCChhHHHHHHHhcCCcccEEEeecCCh--h---HH----HHH
Q 013240 123 IFMHG---IPTEYYGPR-KAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--S---VM----SNL 189 (447)
Q Consensus 123 ~~~~g---~~~~y~g~~-~~~~i~~fi~~~~~~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~~--~---~~----~~~ 189 (447)
++..+ ....|.|.+ +.+.|.+|+.....|.+.+++.+ ++.++.... .++++.|.... . .+ ...
T Consensus 187 ~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~-~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~ 262 (382)
T 2r2j_A 187 YKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFE-NGEELTEEG---LPFLILFHMKEDTESLEIFQNEVARQ 262 (382)
T ss_dssp EECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHH-HHHHHHTTC---CCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChh-hHHHHhcCC---CcEEEEEecCCchHHHHHHHHHHHHH
Confidence 54432 456799998 99999999999999999999754 566665443 24555554331 1 23 222
Q ss_pred HHHhhhhhHhHHhhc-cchhhhhhcCCC--CCCeEEEEcCCCCC-cccccCCCChHHHHHHHHhh
Q 013240 190 ALKYKKKAWFAVAKD-FSEDTMVLYDFD--KVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQN 250 (447)
Q Consensus 190 a~~~~~~~~f~~~~~-~~~~~~~~~~i~--~~P~l~~~~~~~~~-~~~~~g~~~~~~i~~fI~~~ 250 (447)
+..+++...|..+.. .....+..++++ ..|.++++...... ...+.+.++.+.|.+|+...
T Consensus 263 ~~~~~~~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~~~y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 263 LISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp TGGGTTTSEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSSCEEECCCSGGGGSTTHHHHHHHHH
T ss_pred HHHhCCeeEEEEEchHHhHHHHHHcCCCccCCCEEEEEcchhcCCCCccccccCHHHHHHHHHHH
Confidence 335555555554421 123456788886 57999887642110 11123344567899999876
No 184
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.89 E-value=1.2e-08 Score=86.80 Aligned_cols=94 Identities=16% Similarity=0.166 Sum_probs=70.8
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--------
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-------- 104 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-------- 104 (447)
+.-.....++..+.+.+ +..+.+++|.|| ++||++|+...|.+.++++.+++.+ +.+..|+++
T Consensus 9 P~f~l~~~~G~~~~l~~------~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 9 PLFEGIADNGEKISLSD------YIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD--VVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCCEEEETTSCEEEGGG------TTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC--EEEEEEESCCHHHHHHH
T ss_pred CCeEeecCCCCEEEHHH------hcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEeCCCHHHHHHH
Confidence 33333444555555432 133334999999 9999999999999999999987643 888888887
Q ss_pred -------------cchhhhhhCCCcc----ccEEEEEe-CCeeEE-ecCC
Q 013240 105 -------------KYSRLASKQEIDA----FPTLKIFM-HGIPTE-YYGP 135 (447)
Q Consensus 105 -------------~~~~l~~~~~i~~----~Ptl~~~~-~g~~~~-y~g~ 135 (447)
.+.++++.|++.+ +|+.+++. +|+... +.|.
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 81 KEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECS
T ss_pred HHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecC
Confidence 5678999999999 99999995 687664 7773
No 185
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=1.8e-10 Score=97.83 Aligned_cols=88 Identities=13% Similarity=0.215 Sum_probs=65.4
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHH-HHHHhhcCCCCeEEEEEeCccchhhhhhCC-----------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDE-AAPILAKLKEPIVIAKVDADKYSRLASKQE----------------------- 114 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~-~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~----------------------- 114 (447)
.+++++|.||++||++|+...|.+.+ +...+.. ...+.+..|+++..++.+++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~-~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 110 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD-NADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYAL 110 (159)
Confidence 45899999999999999999999998 8877651 2348889999887665554443
Q ss_pred -CccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHh
Q 013240 115 -IDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKF 148 (447)
Q Consensus 115 -i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~ 148 (447)
+.++|+++++ .+|+.+. +.| .+.+++.+++++.
T Consensus 111 ~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 111 RDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQI 146 (159)
Confidence 6779999999 5677665 444 5555666655443
No 186
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.88 E-value=4.9e-09 Score=78.69 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=60.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccch----hhhhhCC--CccccEEEEEeCCeeEEecCCCC
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS----RLASKQE--IDAFPTLKIFMHGIPTEYYGPRK 137 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~----~l~~~~~--i~~~Ptl~~~~~g~~~~y~g~~~ 137 (447)
++.|+++||++|+.+.+.+++++....+ +.+..+|++.++ +++++++ +.++|++ |.+|+.+. |
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~----i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~--~--- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD----FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG--G--- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS----CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE--S---
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC----ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE--C---
Confidence 6789999999999999999999876432 889999997764 8999999 9999998 45786653 2
Q ss_pred HHHHHHHHHHhc
Q 013240 138 AELLVRYLKKFV 149 (447)
Q Consensus 138 ~~~i~~fi~~~~ 149 (447)
.++|.+++++..
T Consensus 72 ~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 YTDFAAWVKENL 83 (85)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 267888877643
No 187
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.88 E-value=2.3e-09 Score=92.02 Aligned_cols=90 Identities=19% Similarity=0.171 Sum_probs=72.1
Q ss_pred cCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcCC-CCeEEEEEeCccc----------------------------hh
Q 013240 59 SFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKLK-EPIVIAKVDADKY----------------------------SR 108 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~-C~~~~p~~~~~a~~l~~~~-~~v~~~~Vd~~~~----------------------------~~ 108 (447)
..++++|.||++||++ |+...|.+.++++.+...+ .++.+..|+++.+ .+
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4689999999999997 9999999999998876421 2499999998743 35
Q ss_pred hhhhCC---------------CccccEEEEEeCCeeEE-ecCCC--CHHHHHHHHHHh
Q 013240 109 LASKQE---------------IDAFPTLKIFMHGIPTE-YYGPR--KAELLVRYLKKF 148 (447)
Q Consensus 109 l~~~~~---------------i~~~Ptl~~~~~g~~~~-y~g~~--~~~~i~~fi~~~ 148 (447)
+++.|+ +.+.|+++++.+|+.+. |.|.. +.+.|.+.++++
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 666655 46789999999887765 77777 889999888765
No 188
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.86 E-value=1.2e-08 Score=86.61 Aligned_cols=91 Identities=9% Similarity=0.140 Sum_probs=74.0
Q ss_pred cCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcC--CCCeEEEEEeCccch----------------------------
Q 013240 59 SFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKL--KEPIVIAKVDADKYS---------------------------- 107 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~-C~~~~p~~~~~a~~l~~~--~~~v~~~~Vd~~~~~---------------------------- 107 (447)
.+++++|.||++||++ |+...|.+.++.+.++.. ..++.+..|+++.+.
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3589999999999997 999999999999988752 125888899886531
Q ss_pred hhhhhCCCcccc---------------EEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 108 RLASKQEIDAFP---------------TLKIF-MHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 108 ~l~~~~~i~~~P---------------tl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
++++.|++...| +++++ .+|+.+. |.|..+.++|.+.+++++
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 478899999999 66666 5687765 788899999999888765
No 189
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.86 E-value=1.2e-08 Score=87.46 Aligned_cols=92 Identities=16% Similarity=0.234 Sum_probs=74.6
Q ss_pred cCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcC--CCCeEEEEEeCccc----------------------------h
Q 013240 59 SFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKL--KEPIVIAKVDADKY----------------------------S 107 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~-C~~~~p~~~~~a~~l~~~--~~~v~~~~Vd~~~~----------------------------~ 107 (447)
..++++|.||++||++ |+...|.+.++.+.++.. ..++.+..|+++.+ .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3589999999999998 999999999999998642 23588999998732 2
Q ss_pred hhhhhCCCcccc---------------EEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 108 RLASKQEIDAFP---------------TLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 108 ~l~~~~~i~~~P---------------tl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
.+++.|++...| +++++ .+|+.+. |.|..+.++|.+.+++++.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 588899999888 76666 5687765 7899999999998887653
No 190
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.81 E-value=3.1e-08 Score=83.89 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=67.4
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----------------------chhhhhhCC
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----------------------YSRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-----------------------~~~l~~~~~ 114 (447)
..++++|.|| ++||++|+...|.+.++++.+++. .+.+..|+++. +.++++.|+
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 112 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND--DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYG 112 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS--SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTT
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcC
Confidence 3349999998 999999999999999999887643 48888998864 677899999
Q ss_pred Cc----ccc--EEEEE-eCCeeEE-ecCCC----CHHHHHHHHHH
Q 013240 115 ID----AFP--TLKIF-MHGIPTE-YYGPR----KAELLVRYLKK 147 (447)
Q Consensus 115 i~----~~P--tl~~~-~~g~~~~-y~g~~----~~~~i~~fi~~ 147 (447)
+. ++| +.+++ .+|+.+. +.|.. ..+++.+.+++
T Consensus 113 v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 113 VFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp CEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 99 999 66666 5687664 66654 45666666554
No 191
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.79 E-value=2.8e-08 Score=86.69 Aligned_cols=89 Identities=19% Similarity=0.207 Sum_probs=73.0
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------------chhhhhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------------YSRLASK 112 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------------------------~~~l~~~ 112 (447)
..++++|.|| ++||++|+...|.+.++++.+... .+.+..|+++. +.++++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQ 107 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHH
Confidence 3589999999 999999999999999999998764 38888888864 4578899
Q ss_pred CCCc------cccEEEEE-eCCeeEE-ecCC----CCHHHHHHHHHHhc
Q 013240 113 QEID------AFPTLKIF-MHGIPTE-YYGP----RKAELLVRYLKKFV 149 (447)
Q Consensus 113 ~~i~------~~Ptl~~~-~~g~~~~-y~g~----~~~~~i~~fi~~~~ 149 (447)
|++. ++|+++++ ++|+... +.|. ++.++|.+.++++.
T Consensus 108 ~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 108 FDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred hCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9999 99999999 5687664 5554 36788888887664
No 192
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.79 E-value=2.9e-08 Score=86.12 Aligned_cols=107 Identities=14% Similarity=0.110 Sum_probs=75.9
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------c
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------Y 106 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------~ 106 (447)
++-.....++..+.+.+ + ..++++|.||++||++|+...|.+.++++.+++. .+.+..|+++. .
T Consensus 30 p~f~l~~~~G~~~~l~~--~-----~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~ 100 (181)
T 2p31_A 30 YDFKAVNIRGKLVSLEK--Y-----RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDS 100 (181)
T ss_dssp GGCEEEBTTSCEEEGGG--G-----TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSC
T ss_pred CceEeecCCCCEecHHH--c-----CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCC
Confidence 33333444555554432 1 4589999999999999999999999999998764 38899999863 1
Q ss_pred ----hhhhhh------------------------CCCcccc-------EEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 107 ----SRLASK------------------------QEIDAFP-------TLKIF-MHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 107 ----~~l~~~------------------------~~i~~~P-------tl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
.+++++ |++.++| +.+++ ++|+.+. |.|..+.++|.+.+++++
T Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 101 NKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp HHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 223333 2255678 55555 6687765 788889999999888764
No 193
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.78 E-value=3.2e-08 Score=84.62 Aligned_cols=108 Identities=15% Similarity=0.189 Sum_probs=77.9
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------c
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------Y 106 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------~ 106 (447)
+.-.....++..+.+.+ + ..++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++. .
T Consensus 13 p~f~l~~~~g~~~~l~~--~-----~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 13 HDFTVKDAKENDVDLSI--F-----KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp GGCEEEBTTSCEEEGGG--G-----TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSC
T ss_pred cceEEEcCCCCEecHHH--h-----CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCC
Confidence 33333444555555443 1 4689999999999999999999999999998764 38899999852 1
Q ss_pred ----hhhhh-hC-----------------------------CC--cccc---EEEEE-eCCeeEE-ecCCCCHHHHHHHH
Q 013240 107 ----SRLAS-KQ-----------------------------EI--DAFP---TLKIF-MHGIPTE-YYGPRKAELLVRYL 145 (447)
Q Consensus 107 ----~~l~~-~~-----------------------------~i--~~~P---tl~~~-~~g~~~~-y~g~~~~~~i~~fi 145 (447)
.++++ ++ ++ .++| +.+++ ++|+.+. +.|..+.+.|.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 163 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDI 163 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHH
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHH
Confidence 23344 33 34 5678 67766 5687765 78988888999998
Q ss_pred HHhcC
Q 013240 146 KKFVA 150 (447)
Q Consensus 146 ~~~~~ 150 (447)
++++.
T Consensus 164 ~~ll~ 168 (170)
T 2p5q_A 164 KQLLE 168 (170)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 88764
No 194
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.78 E-value=3.7e-08 Score=86.16 Aligned_cols=90 Identities=13% Similarity=0.098 Sum_probs=70.7
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------c----hhhh-h---------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------Y----SRLA-S--------------- 111 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------~----~~l~-~--------------- 111 (447)
..++++|.||++||+.|+...|.+.++.+.+.+.+ +.+..|+++. . .+++ +
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~ 124 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 124 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCC--eEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccC
Confidence 45899999999999999999999999999987643 8888998862 1 1223 1
Q ss_pred --------------hCCCcccc------EEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 112 --------------KQEIDAFP------TLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 112 --------------~~~i~~~P------tl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
.+++.++| +.+++ ++|+.+. +.|..+.+.+.+.+.+++.
T Consensus 125 ~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 125 GENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp STTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 24788899 66666 5687765 7898999999999888754
No 195
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.77 E-value=2.4e-08 Score=87.15 Aligned_cols=91 Identities=13% Similarity=0.107 Sum_probs=68.4
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc--------chhh---hh-h--------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--------YSRL---AS-K-------------- 112 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~--------~~~l---~~-~-------------- 112 (447)
+.++++|.||++||++|+...|.+.++.+.+++.+ +.+..|+++. ..++ ++ +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 122 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 122 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGT--CEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCC--eEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccC
Confidence 45899999999999999999999999999997753 7888888752 1111 12 1
Q ss_pred ------------------CCCcccc---EEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcCC
Q 013240 113 ------------------QEIDAFP---TLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (447)
Q Consensus 113 ------------------~~i~~~P---tl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~~ 151 (447)
+++..+| +.+++ ++|+.+. |.|..+.+.|.+.+++++..
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 123 GENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp CC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred CcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 1334566 77777 5687765 78999999999999888753
No 196
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.75 E-value=2.2e-08 Score=85.91 Aligned_cols=89 Identities=13% Similarity=0.141 Sum_probs=68.0
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-----------cchhhh-----------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-----------KYSRLA----------------- 110 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-----------~~~~l~----------------- 110 (447)
..++++|.||++||+.|+ ..|.+.++++.+++. .+.+..|+++ ...+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~ 107 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVN 107 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC------------------CCCSCBBCCCBSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCC
Confidence 468999999999999999 999999999998764 3888888873 111222
Q ss_pred -------------hhCCCcccc------EEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 111 -------------SKQEIDAFP------TLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 111 -------------~~~~i~~~P------tl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
+.|++.++| +.+++ ++|+.+. +.|..+.+.|.+.+++++.
T Consensus 108 ~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 108 GGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp STTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 247888999 66666 6687765 7888888888888887764
No 197
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.74 E-value=2.7e-08 Score=87.60 Aligned_cols=89 Identities=9% Similarity=0.103 Sum_probs=73.3
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l 109 (447)
.+++++|.|| ++||++|+...|.+.++++.+.+. .+.+..|+++. +.++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 3589999999 999999999999999999988764 38888888864 4578
Q ss_pred hhhCCCc-----cccEEEEEe-CCeeEE-ecCCC----CHHHHHHHHHHhc
Q 013240 110 ASKQEID-----AFPTLKIFM-HGIPTE-YYGPR----KAELLVRYLKKFV 149 (447)
Q Consensus 110 ~~~~~i~-----~~Ptl~~~~-~g~~~~-y~g~~----~~~~i~~fi~~~~ 149 (447)
++.|++. ++|+++++. +|+... +.|.. +.++|.+.++++.
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8999999 999999995 687665 55653 6788888887764
No 198
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.73 E-value=7.3e-08 Score=82.22 Aligned_cols=107 Identities=18% Similarity=0.144 Sum_probs=75.0
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----c---
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----Y--- 106 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----~--- 106 (447)
+.-.....++..+.+.+ + .+++++|.||++||++|+...|.+.++.+.+.+. .+.+..|+++. +
T Consensus 12 p~f~l~~~~G~~~~l~~--~-----~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~ 82 (169)
T 2v1m_A 12 YEFTVKDINGVDVSLEK--Y-----RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGGQEPWA 82 (169)
T ss_dssp GGCEEEBTTSCEEEGGG--G-----TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSC
T ss_pred ccceeecCCCCCccHHH--c-----CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCCCCCCC
Confidence 33334444555555543 1 4589999999999999999999999999998764 38899999863 1
Q ss_pred ----hhhh-hhC-----------------------------C-----CccccEEEEE-eCCeeEE-ecCCCCHHHHHHHH
Q 013240 107 ----SRLA-SKQ-----------------------------E-----IDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYL 145 (447)
Q Consensus 107 ----~~l~-~~~-----------------------------~-----i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi 145 (447)
.+++ +++ + |+.+|+.+++ ++|+.+. |.|..+.+.|.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 162 (169)
T 2v1m_A 83 EAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDI 162 (169)
T ss_dssp HHHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHH
T ss_pred HHHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHH
Confidence 2221 222 3 3345777777 4587765 78888888888888
Q ss_pred HHhc
Q 013240 146 KKFV 149 (447)
Q Consensus 146 ~~~~ 149 (447)
++++
T Consensus 163 ~~ll 166 (169)
T 2v1m_A 163 MELL 166 (169)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7765
No 199
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.73 E-value=3.9e-08 Score=86.37 Aligned_cols=90 Identities=13% Similarity=0.067 Sum_probs=74.6
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------------chhhhhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------------YSRLASK 112 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------------------------~~~l~~~ 112 (447)
..++++|.|| ++||++|+...|.+.++++.+... .+.+..|+++. +.++++.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 121 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQA 121 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHH
Confidence 3589999999 999999999999999999988753 38888888863 4568888
Q ss_pred CCCc-----cccEEEEEe-CCeeEE-ecCC----CCHHHHHHHHHHhcC
Q 013240 113 QEID-----AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKKFVA 150 (447)
Q Consensus 113 ~~i~-----~~Ptl~~~~-~g~~~~-y~g~----~~~~~i~~fi~~~~~ 150 (447)
|++. ++|+++++. +|+... +.|. ++.++|.+.++++..
T Consensus 122 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9999 999999995 677665 5554 378999999988875
No 200
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.71 E-value=6.4e-08 Score=84.05 Aligned_cols=88 Identities=16% Similarity=0.088 Sum_probs=66.1
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------c----hhhhhhC--------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------Y----SRLASKQ-------------- 113 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------~----~~l~~~~-------------- 113 (447)
..++++|.||++||+.|+...|.+.++++.+.+. .+.+..|+++. . .++++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 123 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCC
Confidence 4689999999999999999999999999998764 38899998862 1 1222222
Q ss_pred -----------------C-----CccccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHh
Q 013240 114 -----------------E-----IDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKF 148 (447)
Q Consensus 114 -----------------~-----i~~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~ 148 (447)
+ |+..|+.+++ ++|+.+. |.|..+.++|.++++++
T Consensus 124 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 124 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred cchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 3 2335898888 5687665 78888888888777654
No 201
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.68 E-value=3.4e-08 Score=88.28 Aligned_cols=81 Identities=15% Similarity=0.301 Sum_probs=61.8
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEe------------------------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD------------------------------------ 102 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd------------------------------------ 102 (447)
+.+++++.|+++||++|++++|.+.++++. + +.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~----v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~ 158 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G----ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSV 158 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T----EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C----cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCC
Confidence 346899999999999999999999988652 1 3333221
Q ss_pred ----C----ccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHh
Q 013240 103 ----A----DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 103 ----~----~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~ 148 (447)
| +.+.++++++||+++|++ ++.+|. .+.|..+.+.|.+++.+.
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~--~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 159 APASCDVDIADHYALGVQLGVSGTPAV-VLSNGT--LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC--EEESCCCHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHcCCCccCEE-EEcCCe--EecCCCCHHHHHHHHHHh
Confidence 2 234678899999999999 556774 457888999999988765
No 202
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.67 E-value=1.7e-06 Score=78.75 Aligned_cols=194 Identities=13% Similarity=0.092 Sum_probs=119.2
Q ss_pred CCceecCChhHHHHHHHhcCCcccEEEeecCC-h-------hHHHHHHHHhhh---hhHhHHhh---ccchhhhhhcCCC
Q 013240 151 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E-------SVMSNLALKYKK---KAWFAVAK---DFSEDTMVLYDFD 216 (447)
Q Consensus 151 ~~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~-------~~~~~~a~~~~~---~~~f~~~~---~~~~~~~~~~~i~ 216 (447)
..+.+++. +++++.+.... .+++|.|+.. + +.+.+++..+.+ ...|..+. +...+++.+|++.
T Consensus 12 ~~v~~l~~-~~f~~~i~~~~--~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~ 88 (244)
T 3q6o_A 12 DPLTLLQA-DTVRGAVLGSR--SAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIP 88 (244)
T ss_dssp SSSEEECT-TTHHHHHSSCS--SEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCceeCCh-hhHHHHHhhCC--CeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCC
Confidence 45777765 46887775543 3678877754 2 256677777765 34444332 3457789999999
Q ss_pred CCCeEEEEcCCCCC----cccccCCCChHHHHHHHHhh----C------CCCccccChhhHHhhh--cCCCcEEEEEEeC
Q 013240 217 KVPALVALQPSYNE----HNIFYGPFDEEFLEEFIKQN----F------LPLSVPINQDTLNLLK--DDKRKIVLAIVED 280 (447)
Q Consensus 217 ~~P~l~~~~~~~~~----~~~~~g~~~~~~i~~fI~~~----~------~p~~~~l~~~~~~~~~--~~~~~~vl~~~~~ 280 (447)
.+|++++|+++... ...+.| .+.+.|.+||.+. . .|.+...+..++..+. ....+.+++|...
T Consensus 89 ~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~ 167 (244)
T 3q6o_A 89 GFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXG 167 (244)
T ss_dssp SSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECT
T ss_pred ccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEEC
Confidence 99999999974332 123444 6888888887654 1 1233455666776654 2334555555433
Q ss_pred CChhhHHHHHHHHHHHHHhCC---CceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhH
Q 013240 281 ETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQ 357 (447)
Q Consensus 281 ~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~ 357 (447)
+.. ..+.++..+. ++.+..++..+ ..+++.||+ .++|++++++++++...+.. ...+.+.
T Consensus 168 -~~~-------~~~~~~~d~~~~~~i~v~~~~~~~-~~l~~~f~v---~~~Pslvl~~~~g~~~~~~~-----~~~~r~~ 230 (244)
T 3q6o_A 168 -GSY-------LAREVALDLSQHKGVAVRRVLNTE-ANVVRKFGV---TDFPSCYLLFRNGSVSRVPV-----LMESRSF 230 (244)
T ss_dssp -TCC-------HHHHHHHHTTTCTTEEEEEEETTC-HHHHHHHTC---CCSSEEEEEETTSCEEECCC-----SSSSHHH
T ss_pred -Ccc-------hHHHHHHHhccCCceEEEEEeCch-HHHHHHcCC---CCCCeEEEEeCCCCeEeecc-----ccccHHH
Confidence 221 2333444433 37777777643 789999999 67999999999875555442 1223445
Q ss_pred HHHHHHHH
Q 013240 358 ISRFLEGY 365 (447)
Q Consensus 358 i~~Fl~~~ 365 (447)
++.+++.+
T Consensus 231 ~~~~l~~~ 238 (244)
T 3q6o_A 231 YTAYLQRL 238 (244)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 55555443
No 203
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.65 E-value=1.3e-07 Score=83.93 Aligned_cols=64 Identities=17% Similarity=0.166 Sum_probs=48.6
Q ss_pred CCcccccccCC-CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc
Q 013240 32 SSEEETKFKID-GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (447)
Q Consensus 32 ~~~~~~~~~~~-~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~ 104 (447)
+.++-.....+ +..+.|.+ | ..++++|.||++||+.|+...|.+.++++++++.+ +.+..|+|+
T Consensus 25 ~~p~f~l~~~~~G~~v~l~~--~-----~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g--~~vv~v~~d 89 (208)
T 2f8a_A 25 SVYAFSARPLAGGEPVSLGS--L-----RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRG--LVVLGFPCN 89 (208)
T ss_dssp CGGGCEECBTTCSSCEEGGG--G-----TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECC
T ss_pred ccCceEeeeCCCCCCccHHH--c-----CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCC--eEEEEEECC
Confidence 34444444455 56665542 2 45899999999999999999999999999987643 889999986
No 204
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.64 E-value=1.1e-07 Score=81.82 Aligned_cols=83 Identities=14% Similarity=0.178 Sum_probs=64.7
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC-----------------------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA----------------------------------- 103 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~----------------------------------- 103 (447)
..++.++.|+++||+||+.+.|.+.++.+... ++.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~----~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~ 96 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP----NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSG 96 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCC----CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 34688999999999999999999999887532 255555442
Q ss_pred ----------------------------------ccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhc
Q 013240 104 ----------------------------------DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 104 ----------------------------------~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~ 149 (447)
..+.++++++||.++||+++ +|+ .+.|..+.+.+.+.+.+.+
T Consensus 97 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~--~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 97 KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA--LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE--EECSCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE--EeeCCCCHHHHHHHHHHHH
Confidence 23445778899999999987 674 5679999999999887754
No 205
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.63 E-value=1.5e-07 Score=81.91 Aligned_cols=106 Identities=17% Similarity=0.141 Sum_probs=72.7
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----c---
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----Y--- 106 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----~--- 106 (447)
++-.....++..+.+.+ + ..++++|.||++||+.|+...|.+.++++++++. .+.+..|+++. +
T Consensus 30 p~f~l~~~~G~~v~l~~--~-----~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d~~~~~~~~~ 100 (185)
T 2gs3_A 30 HEFSAKDIDGHMVNLDK--Y-----RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGS 100 (185)
T ss_dssp GGCEEEBTTSCEEEGGG--G-----TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSC
T ss_pred CCceeEcCCCCEeeHHH--c-----CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECcccCCCCCCC
Confidence 33334444555555432 1 4589999999999999999999999999998764 38899998863 1
Q ss_pred ----hhhhhhCCCc------------------------------------cccEEEEE-eCCeeEE-ecCCCCHHHHHHH
Q 013240 107 ----SRLASKQEID------------------------------------AFPTLKIF-MHGIPTE-YYGPRKAELLVRY 144 (447)
Q Consensus 107 ----~~l~~~~~i~------------------------------------~~Ptl~~~-~~g~~~~-y~g~~~~~~i~~f 144 (447)
.++++++++. ..|+.+++ ++|+.+. |.|..+.++|.+.
T Consensus 101 ~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 180 (185)
T 2gs3_A 101 NEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKD 180 (185)
T ss_dssp HHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGG
T ss_pred HHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHH
Confidence 2344444321 24777777 4577664 7888777777776
Q ss_pred HHHh
Q 013240 145 LKKF 148 (447)
Q Consensus 145 i~~~ 148 (447)
++++
T Consensus 181 i~~l 184 (185)
T 2gs3_A 181 LPHY 184 (185)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
No 206
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.63 E-value=1.6e-07 Score=82.64 Aligned_cols=89 Identities=19% Similarity=0.223 Sum_probs=71.4
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l 109 (447)
..++++|.|| ++||++|....|.+.++++.++.. .+.+..|+++. +.++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 110 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL--GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRL 110 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHH
Confidence 3589999999 999999999999999999998753 38888888863 2468
Q ss_pred hhhCCCc------cccEEEEEe-CCeeEE-ecC----CCCHHHHHHHHHHhc
Q 013240 110 ASKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKFV 149 (447)
Q Consensus 110 ~~~~~i~------~~Ptl~~~~-~g~~~~-y~g----~~~~~~i~~fi~~~~ 149 (447)
++.|++. .+|+.+++. +|+... +.| .++.+++.+.++.+.
T Consensus 111 ~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 111 SEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 8899999 899999885 576554 445 456788888887663
No 207
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.63 E-value=3.8e-07 Score=73.50 Aligned_cols=95 Identities=14% Similarity=0.081 Sum_probs=80.2
Q ss_pred CCeEEe-ChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEE
Q 013240 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (447)
Q Consensus 43 ~~v~~l-~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl 121 (447)
..+..| +.++++++++.+++++|-|+++||+.| .+.|.++|+.+ . .+.|+.++ ++++++++++. .|++
T Consensus 21 ~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~---d~~F~~t~---~~~v~~~~~v~-~~~v 89 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-P---GVSFGIST---DSEVLTHYNIT-GNTI 89 (124)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T---TSEEEEEC---CHHHHHHTTCC-SSCE
T ss_pred CcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-C---CceEEEEC---hHHHHHHcCCC-CCeE
Confidence 455667 457899999888999999999999999 67899999987 3 28898886 47899999999 8999
Q ss_pred EEEeCC--eeEEecC----CCCHHHHHHHHHHh
Q 013240 122 KIFMHG--IPTEYYG----PRKAELLVRYLKKF 148 (447)
Q Consensus 122 ~~~~~g--~~~~y~g----~~~~~~i~~fi~~~ 148 (447)
++|+++ ....|.| ..+.+.|.+||...
T Consensus 90 vlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 90 CLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 999985 4567986 78999999999864
No 208
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.62 E-value=1.6e-07 Score=81.23 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=73.9
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-------c
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------Y 106 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-------~ 106 (447)
++-.....++..+.+.+ + .+++++|.||++||++|+...|.+.++++.+.+. .+.+..|+++. .
T Consensus 19 p~f~l~d~~G~~v~l~~--~-----~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~~~d~ 89 (180)
T 3kij_A 19 YAFEVKDAKGRTVSLEK--Y-----KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS--HFSVLAFPCNQFGESEPRP 89 (180)
T ss_dssp GGCEEEBTTSCEEEGGG--G-----TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT--SEEEEEEECCCSTTCCCSC
T ss_pred cceEEecCCCCEecHHH--c-----CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC--CeEEEEEECCccccCCCCC
Confidence 34344455566555543 1 4589999999999999999999999999998754 38888998753 1
Q ss_pred ----hhhhhh-CCCc--------------------------cccE-----EEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 107 ----SRLASK-QEID--------------------------AFPT-----LKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 107 ----~~l~~~-~~i~--------------------------~~Pt-----l~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
.+++++ +++. +.|+ +++-++|+.+. |.|..+.+.|.+.+.+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 90 SKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp HHHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 344555 4322 2564 45556787764 788888777777666554
No 209
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.60 E-value=7e-08 Score=85.90 Aligned_cols=81 Identities=21% Similarity=0.221 Sum_probs=61.7
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEE--e----------------------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKV--D---------------------------------- 102 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~V--d---------------------------------- 102 (447)
+.++.++.|+++||+||++++|.++++.+. + +.+..+ .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~--v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----G--ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----T--EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----C--cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 346899999999999999999999987541 1 333322 1
Q ss_pred ----C----ccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHh
Q 013240 103 ----A----DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 103 ----~----~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~ 148 (447)
| +.+.++++++||+++||+++ .+|+ .+.|..+.+.|.+++.+.
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLKPADLLRALEET 209 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCCHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCCHHHHHHHHHhc
Confidence 2 13467889999999999998 6775 567888999999888653
No 210
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.55 E-value=3.3e-07 Score=82.06 Aligned_cols=88 Identities=18% Similarity=0.256 Sum_probs=71.4
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhhh
Q 013240 60 FDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRLA 110 (447)
Q Consensus 60 ~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l~ 110 (447)
.++++|.|| ++||+.|....|.+.+++++++..+ +.+..|+++. +.+++
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~ 133 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVN--CEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQIS 133 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHH
Confidence 489999999 9999999999999999999987533 8888888753 34688
Q ss_pred hhCCCc------cccEEEEEe-CCeeEE-ecC----CCCHHHHHHHHHHhc
Q 013240 111 SKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKFV 149 (447)
Q Consensus 111 ~~~~i~------~~Ptl~~~~-~g~~~~-y~g----~~~~~~i~~fi~~~~ 149 (447)
+.|++. .+|+++++. +|+... +.| .++.+++.+.++.+.
T Consensus 134 ~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 134 RDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 899999 999999995 576654 344 367788888887765
No 211
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.54 E-value=3.9e-07 Score=80.42 Aligned_cols=88 Identities=14% Similarity=0.161 Sum_probs=70.9
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhhh
Q 013240 60 FDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRLA 110 (447)
Q Consensus 60 ~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l~ 110 (447)
.++++|.|| ++||++|....|.+.+++++++.. .+.+..|+++. ..+++
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~--~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 113 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI--GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM 113 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH
Confidence 579999999 999999999999999999998753 38888888864 35688
Q ss_pred hhCCCc------cccEEEEEe-CCeeEE-ecC----CCCHHHHHHHHHHhc
Q 013240 111 SKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKFV 149 (447)
Q Consensus 111 ~~~~i~------~~Ptl~~~~-~g~~~~-y~g----~~~~~~i~~fi~~~~ 149 (447)
+.|++. ++|+++++. +|+... +.| .++.++|.+.++.+.
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 889999 999999995 576554 434 356788888887664
No 212
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.53 E-value=3.2e-07 Score=80.26 Aligned_cols=89 Identities=16% Similarity=0.284 Sum_probs=70.4
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l 109 (447)
..++++|.|| ++||++|....|.+.+++++++..+ +.+..|+++. +.++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN--VELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 3589999999 9999999999999999999987533 8888888763 3468
Q ss_pred hhhCCCc-----cccEEEEEe-CCeeEE-ecCC----CCHHHHHHHHHHhc
Q 013240 110 ASKQEID-----AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKKFV 149 (447)
Q Consensus 110 ~~~~~i~-----~~Ptl~~~~-~g~~~~-y~g~----~~~~~i~~fi~~~~ 149 (447)
++.|++. .+|+++++. +|+... +.|. ++.+++.+.++.+.
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 8899999 899999994 577654 4453 45777777776553
No 213
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.52 E-value=1.1e-07 Score=76.78 Aligned_cols=101 Identities=17% Similarity=0.226 Sum_probs=80.5
Q ss_pred HHHhcCCCcee--cCChhHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHhHHhhccchhhhhhcCCCC
Q 013240 145 LKKFVAPDVSI--LNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDK 217 (447)
Q Consensus 145 i~~~~~~~v~~--i~s~~~~~~~l~~~~~~~~~vi~f~~~~-----~~~~~~a~~~~~~~~f~~~~~~~~~~~~~~~i~~ 217 (447)
+.++.+|+... |++.++++.|+..++ +++|||+++. ..|..+|..+ +.+.|+.+ .+.++++.|+++
T Consensus 13 m~kq~gP~~~~~~i~s~~e~e~fi~~~~---v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t--~~~~v~~~~~v~- 85 (124)
T 2l4c_A 13 SSDGPGAAQEPTWLTDVPAAMEFIAATE---VAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIS--TDSEVLTHYNIT- 85 (124)
T ss_dssp SCCCSCCSCCCEECCSHHHHHHHHHTSS---EEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEE--CCHHHHHHTTCC-
T ss_pred HHhccCCCCcceEcCCHHHHHHHHhcCC---CEEEEEECCCCChhHHHHHHHHHhC-CCceEEEE--ChHHHHHHcCCC-
Confidence 34567777654 999999999997654 5899998762 3788889998 66666655 468899999998
Q ss_pred CCeEEEEcCCCCCcccccC----CCChHHHHHHHHhhCC
Q 013240 218 VPALVALQPSYNEHNIFYG----PFDEEFLEEFIKQNFL 252 (447)
Q Consensus 218 ~P~l~~~~~~~~~~~~~~g----~~~~~~i~~fI~~~~~ 252 (447)
.|++++|++.++....|.| +++.+.|.+||..|.+
T Consensus 86 ~~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 86 GNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp SSCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred CCeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 6999999987777778886 7899999999998763
No 214
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.50 E-value=7.1e-07 Score=76.40 Aligned_cols=92 Identities=14% Similarity=0.217 Sum_probs=69.2
Q ss_pred cCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc---c----hhhhhh------------------
Q 013240 59 SFDYILVDFYAPWCG-HCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---Y----SRLASK------------------ 112 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~-~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~---~----~~l~~~------------------ 112 (447)
..++++|.||++||+ +|....|.+.++.+.++..+.++.+..|+++. . ..++++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 458999999999999 99999999999999988754458889998862 1 112222
Q ss_pred -------------------CCCccccEEEEE-eCCeeEE-ecCCC--CHHHHHHHHHHhcC
Q 013240 113 -------------------QEIDAFPTLKIF-MHGIPTE-YYGPR--KAELLVRYLKKFVA 150 (447)
Q Consensus 113 -------------------~~i~~~Ptl~~~-~~g~~~~-y~g~~--~~~~i~~fi~~~~~ 150 (447)
+++...|+++++ ++|+.+. |.|.. +.++|.+.+++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 234567887777 4587765 67765 58899999888764
No 215
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.50 E-value=9.4e-08 Score=70.87 Aligned_cols=70 Identities=10% Similarity=0.233 Sum_probs=52.3
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhh---hCCCccccEEEEEeCCeeEEecCCCCHHH
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLAS---KQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~---~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~ 140 (447)
++.|+++||++|+...+.+++. + +.+..+|++.++++.+ ++++.++|++ +.+|+.+ |..+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~----i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~~---~g~~~~~ 68 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----G----FDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLSW---SGFRPDM 68 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T----CCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEEE---ESCCHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----C----CCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEEE---ecCCHHH
Confidence 6789999999999999888762 2 6678899988776654 5899999998 4577643 3456666
Q ss_pred HHHHHHH
Q 013240 141 LVRYLKK 147 (447)
Q Consensus 141 i~~fi~~ 147 (447)
|.+++.+
T Consensus 69 l~~~l~~ 75 (81)
T 1h75_A 69 INRLHPA 75 (81)
T ss_dssp HGGGSCC
T ss_pred HHHHHhc
Confidence 6666544
No 216
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.49 E-value=4.5e-07 Score=65.87 Aligned_cols=68 Identities=16% Similarity=0.254 Sum_probs=53.1
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhh---hCCCccccEEEEEeCCeeEEecCCCCHHH
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLAS---KQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~---~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~ 140 (447)
++.|+++||++|++..+.+++. + +.+..+|.+.++++.+ ++++.++|+++. +|+. .|+.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~----i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~~g~~~~~ 68 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----G----LAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---WSGFRPER 68 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T----CCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---EESCCHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----C----CCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---EcCCCHHH
Confidence 6789999999999998888753 2 6678889988877665 899999999984 7754 34456777
Q ss_pred HHHHH
Q 013240 141 LVRYL 145 (447)
Q Consensus 141 i~~fi 145 (447)
|.+++
T Consensus 69 l~~~l 73 (75)
T 1r7h_A 69 IKQLQ 73 (75)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77776
No 217
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.47 E-value=4.2e-07 Score=80.10 Aligned_cols=92 Identities=12% Similarity=0.063 Sum_probs=65.8
Q ss_pred cCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcC-CCCeEEEEEeCcc----------------------------chh
Q 013240 59 SFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKL-KEPIVIAKVDADK----------------------------YSR 108 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~-C~~~~p~~~~~a~~l~~~-~~~v~~~~Vd~~~----------------------------~~~ 108 (447)
.+++++|.||++||++ |....|.+.++.+.+... +.++.+..|+++. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4589999999999997 999999999998888643 3348888888763 135
Q ss_pred hhhhCCCc-ccc---------------EEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 109 LASKQEID-AFP---------------TLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 109 l~~~~~i~-~~P---------------tl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
+++.||+. +.| +++++ .+|+.+. |.|..+.+.+.+.+.+.+.
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 77888887 444 55555 5687765 6777777777766666543
No 218
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.43 E-value=1.3e-05 Score=80.92 Aligned_cols=177 Identities=12% Similarity=0.092 Sum_probs=115.7
Q ss_pred CceecCChhHHHHHHHhcCCcccEEEeecCC-h-------hHHHHHHHHhhh---hhHhHHhh---ccchhhhhhcCCCC
Q 013240 152 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E-------SVMSNLALKYKK---KAWFAVAK---DFSEDTMVLYDFDK 217 (447)
Q Consensus 152 ~v~~i~s~~~~~~~l~~~~~~~~~vi~f~~~-~-------~~~~~~a~~~~~---~~~f~~~~---~~~~~~~~~~~i~~ 217 (447)
.+.+++. ++++..+.... .+++|.|+.. + +.+.+++..+.+ ...|+.+. +...+++.+|+|.+
T Consensus 13 ~V~~Lt~-~~f~~~v~~~~--k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 13 PLTLLDA-DSVRPTVLGSS--SAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp SSEEECT-TTHHHHHSSCS--SEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CcEECCh-HHHHHHHHhCC--CeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 5677764 56887775443 3688888755 2 357777888776 34444332 23578899999999
Q ss_pred CCeEEEEcCCCC---CcccccCCCChHHHHHHHHhhC----------CCCccccChhhHHhhhcCC--CcEEEEEEeCCC
Q 013240 218 VPALVALQPSYN---EHNIFYGPFDEEFLEEFIKQNF----------LPLSVPINQDTLNLLKDDK--RKIVLAIVEDET 282 (447)
Q Consensus 218 ~P~l~~~~~~~~---~~~~~~g~~~~~~i~~fI~~~~----------~p~~~~l~~~~~~~~~~~~--~~~vl~~~~~~~ 282 (447)
+|++++|+++.. ....+.|..+.+.|.+||.+.. .|.+..++..++..+.... .+.+++|.+. +
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~-~ 168 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFERE-D 168 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECT-T
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCC-c
Confidence 999999997432 3345667788888888886652 2334566777777665433 3555555433 2
Q ss_pred hhhHHHHHHHHHHHHHhCC---CceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceec
Q 013240 283 EEKSQKLVTTLKAAASANR---ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTV 343 (447)
Q Consensus 283 ~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~ 343 (447)
.. ..+.++..+. ++.+..++..+ ..+++.||+ ..+|++++++.+++....
T Consensus 169 s~-------~~~~~~ldl~~~~~v~v~~v~~~~-~~l~~kfgV---~~~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 169 SY-------LGREVTLDLSQYHAVAVRRVLNTE-SDLVNKFGV---TDFPSCYLLLRNGSVSRV 221 (519)
T ss_dssp CC-------HHHHHHHHTTTCTTEEEEEEETTC-HHHHHHHTC---CCSSEEEEEETTSCEEEC
T ss_pred hH-------HHHHHHHHhhccCCeeEEEecCch-HHHHHHcCC---CCCCeEEEEeCCCceeec
Confidence 21 2344444444 37777777643 789999999 678999999997654433
No 219
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.43 E-value=1.1e-06 Score=78.25 Aligned_cols=89 Identities=15% Similarity=0.267 Sum_probs=69.9
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l 109 (447)
..++++|.|| ++||+.|....|.+.++++++++.+ +.+..|+++. +.++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERN--VELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 3579999999 9999999999999999999987533 7788887753 3568
Q ss_pred hhhCCCc-----cccEEEEEe-CCeeEE-ecC----CCCHHHHHHHHHHhc
Q 013240 110 ASKQEID-----AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKFV 149 (447)
Q Consensus 110 ~~~~~i~-----~~Ptl~~~~-~g~~~~-y~g----~~~~~~i~~fi~~~~ 149 (447)
++.|++. .+|+.+++. +|+... +.| .++.+++.+.++.+.
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8899999 899999985 576554 434 356788888877654
No 220
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.40 E-value=2.7e-06 Score=72.31 Aligned_cols=87 Identities=14% Similarity=0.140 Sum_probs=65.7
Q ss_pred cCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----------------------chhhhhhCC
Q 013240 59 SFDYILVDFYAPW-CGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----------------------YSRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~~~~-C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-----------------------~~~l~~~~~ 114 (447)
.+++++|.||++| |++|+...|.+.++++.+ . .+.+..|+++. +.++++.|+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~---~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 118 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G---DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFG 118 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S---SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C---CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhC
Confidence 3579999999999 999999999999999988 2 37788887762 346777888
Q ss_pred Ccc------ccEEEEEe-CCeeEE-ecCC-----CCHHHHHHHHHHhc
Q 013240 115 IDA------FPTLKIFM-HGIPTE-YYGP-----RKAELLVRYLKKFV 149 (447)
Q Consensus 115 i~~------~Ptl~~~~-~g~~~~-y~g~-----~~~~~i~~fi~~~~ 149 (447)
+.. .|+.+++. +|+... +.|. .+.+++.+.+++++
T Consensus 119 v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 119 VYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred CccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 886 49988885 576654 5442 24477777777653
No 221
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.39 E-value=1.1e-06 Score=79.77 Aligned_cols=85 Identities=13% Similarity=0.167 Sum_probs=63.8
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC------------------------------------
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA------------------------------------ 103 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~------------------------------------ 103 (447)
.+..++.|+.+||++|+++.|.+.++.+. + +|.+..+..
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g---~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l 171 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G---KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKL 171 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T---SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C---cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCC
Confidence 35789999999999999999998886653 1 365554332
Q ss_pred --------------ccchhhhhhCCCccccEEEEEe-CCeeEEecCCCCHHHHHHHHHHhc
Q 013240 104 --------------DKYSRLASKQEIDAFPTLKIFM-HGIPTEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 104 --------------~~~~~l~~~~~i~~~Ptl~~~~-~g~~~~y~g~~~~~~i~~fi~~~~ 149 (447)
+.+.++++++||+++|++++.. +|......|..+.+.|.+++.+..
T Consensus 172 ~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 172 NVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred CccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 1235577889999999999987 476556789999999988886643
No 222
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.38 E-value=1.9e-06 Score=77.20 Aligned_cols=87 Identities=16% Similarity=0.223 Sum_probs=67.6
Q ss_pred cCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 013240 59 SFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (447)
Q Consensus 59 ~~~~~lV~f~~-~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l 109 (447)
..++++|.||+ .||++|....|.+.++++.+++.+ +.+..|+++. +..+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 145 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN--CQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEI 145 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHH
Confidence 45899999996 999999999999999999987543 8888888863 2357
Q ss_pred hhhCCCc------cccEEEEEe-CCeeEE-ecCC----CCHHHHHHHHHH
Q 013240 110 ASKQEID------AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKK 147 (447)
Q Consensus 110 ~~~~~i~------~~Ptl~~~~-~g~~~~-y~g~----~~~~~i~~fi~~ 147 (447)
++.|++. .+|+.+++. +|+.+. +.|. +..+++.+.++.
T Consensus 146 ~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 146 SKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 7889998 899999995 577654 4443 345666666654
No 223
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.37 E-value=3.3e-06 Score=71.22 Aligned_cols=80 Identities=10% Similarity=0.032 Sum_probs=59.2
Q ss_pred HhHccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc---------------------cchhhhhh
Q 013240 55 SAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD---------------------KYSRLASK 112 (447)
Q Consensus 55 ~~~~~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~---------------------~~~~l~~~ 112 (447)
++..+.++++|.|| +.||++|....|.+.++.+.++..+ .+..|+++ .+.++++.
T Consensus 30 ~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~---~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 106 (159)
T 2a4v_A 30 KITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA---AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGL 106 (159)
T ss_dssp HHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC---EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHH
T ss_pred HHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC---cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHH
Confidence 33333457889987 9999999999999999999987654 44555553 23467888
Q ss_pred CCCcccc-------EEEEEeCCeeEE-ecCCCCH
Q 013240 113 QEIDAFP-------TLKIFMHGIPTE-YYGPRKA 138 (447)
Q Consensus 113 ~~i~~~P-------tl~~~~~g~~~~-y~g~~~~ 138 (447)
|++...| ++++ .+|+... +.|....
T Consensus 107 ~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 107 LGAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp HTCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHH
T ss_pred hCCcccccCCccceEEEE-cCCEEEEEEccCCcc
Confidence 9999998 6666 8898775 6665443
No 224
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.37 E-value=5e-07 Score=70.56 Aligned_cols=70 Identities=19% Similarity=0.214 Sum_probs=51.0
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-------hhhhhhCCCccccEEEE
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-------SRLASKQEIDAFPTLKI 123 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-------~~l~~~~~i~~~Ptl~~ 123 (447)
+.++++++.++ ++.|+++||++|+++.+.+++..... +. +..+|++.+ ..+++.+++.++|++
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~----~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i-- 72 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKE----GL--LEFVDITATSDTNEIQDYLQQLTGARTVPRV-- 72 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCT----TS--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCC----Cc--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--
Confidence 45677776544 67799999999999999988754321 11 556777665 357888999999997
Q ss_pred EeCCeeE
Q 013240 124 FMHGIPT 130 (447)
Q Consensus 124 ~~~g~~~ 130 (447)
|.+|+.+
T Consensus 73 ~~~g~~i 79 (105)
T 1kte_A 73 FIGKECI 79 (105)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 4577655
No 225
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.35 E-value=3.9e-06 Score=70.96 Aligned_cols=102 Identities=14% Similarity=0.117 Sum_probs=72.7
Q ss_pred cccCCCCeEEeChhhHHHhHccCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc------------
Q 013240 38 KFKIDGKVIELDESNFDSAISSFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------------ 104 (447)
Q Consensus 38 ~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~-~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~------------ 104 (447)
....++..+.+.+ | ..++++|.||+ +||++|....|.+.++.+.+++.+ +.+..|+++
T Consensus 20 l~~~~G~~~~l~~--~-----~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d~~~~~~~~~~~~ 90 (163)
T 3gkn_A 20 LSLSGGTQTTLRA--H-----AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG--AKILGVSRDSVKSHDNFCAKQ 90 (163)
T ss_dssp EECSTTCEECSGG--G-----TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHH
T ss_pred ccCCCCCEEEHHH--h-----CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHh
Confidence 4444555544432 2 34699999998 999999999999999999988654 777777775
Q ss_pred ---------cchhhhhhCCCcc------------ccEEEEEe-CCeeEE-ecCC---CCHHHHHHHHHHh
Q 013240 105 ---------KYSRLASKQEIDA------------FPTLKIFM-HGIPTE-YYGP---RKAELLVRYLKKF 148 (447)
Q Consensus 105 ---------~~~~l~~~~~i~~------------~Ptl~~~~-~g~~~~-y~g~---~~~~~i~~fi~~~ 148 (447)
...++++.|++.. .|+.+++. +|+... |.|. ...+++.+.++++
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 91 GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 2346778889887 89999996 476654 5442 3346666666654
No 226
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.26 E-value=2e-06 Score=75.09 Aligned_cols=86 Identities=16% Similarity=0.253 Sum_probs=64.8
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc----------------------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD---------------------------------- 104 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~---------------------------------- 104 (447)
..++.++.|+++||+||+.+.|.+.++.+.+.. ++.|..+...
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~ 100 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA---DVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHK 100 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC---CeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999998876533 4777666542
Q ss_pred ---------------------------------------cchhhhhhCCCccccEEEEEeCCeeE-EecCCCCHHHHHHH
Q 013240 105 ---------------------------------------KYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRY 144 (447)
Q Consensus 105 ---------------------------------------~~~~l~~~~~i~~~Ptl~~~~~g~~~-~y~g~~~~~~i~~f 144 (447)
.+.++++++||.++|++++ +|+.. ...|..+.+.+.+.
T Consensus 101 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~ 178 (192)
T 3h93_A 101 EHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKL 178 (192)
T ss_dssp SCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHH
T ss_pred hCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHH
Confidence 0123456789999999987 67544 45688888888887
Q ss_pred HHHhc
Q 013240 145 LKKFV 149 (447)
Q Consensus 145 i~~~~ 149 (447)
+..++
T Consensus 179 i~~l~ 183 (192)
T 3h93_A 179 ADYLI 183 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 227
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.23 E-value=4.9e-06 Score=71.43 Aligned_cols=68 Identities=12% Similarity=0.159 Sum_probs=54.5
Q ss_pred cCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--------------c--------chhhhhhCCC
Q 013240 59 SFDYILVDFYAPW-CGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--------------K--------YSRLASKQEI 115 (447)
Q Consensus 59 ~~~~~lV~f~~~~-C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~--------------~--------~~~l~~~~~i 115 (447)
..++++|.||+.| |++|+...|.+.++.+. . .+.+..|+.+ . +.++++.|++
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~----~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 117 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S----GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGV 117 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T----TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c----CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCC
Confidence 3579999999999 99999999999999886 2 2778888876 2 3568889999
Q ss_pred ccc---------cEEEEEe-CCeeEE
Q 013240 116 DAF---------PTLKIFM-HGIPTE 131 (447)
Q Consensus 116 ~~~---------Ptl~~~~-~g~~~~ 131 (447)
... |+.+++. +|+...
T Consensus 118 ~~~~~~~~g~~~p~~~lid~~G~I~~ 143 (175)
T 1xvq_A 118 TIADGPMAGLLARAIVVIGADGNVAY 143 (175)
T ss_dssp BBCSSTTTTSBCSEEEEECTTSBEEE
T ss_pred cccccccCCcccceEEEECCCCeEEE
Confidence 887 8888775 577664
No 228
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.20 E-value=1.1e-06 Score=69.75 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=50.2
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccch-------hhhhhCCCccccEEEE
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS-------RLASKQEIDAFPTLKI 123 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~-------~l~~~~~i~~~Ptl~~ 123 (447)
+.++++++.. .++.|+++||++|+++.+.+++.... .+. +..+|++.++ .+++.+|+.++|++++
T Consensus 10 ~~~~~~i~~~--~vv~f~~~~Cp~C~~~~~~L~~~~~~----~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 10 EFVQQRLANN--KVTIFVKYTCPFCRNALDILNKFSFK----RGA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp HHHHTTCCTT--CEEEEECTTCHHHHHHHHHHTTSCBC----TTS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHhccC--CEEEEEeCCChhHHHHHHHHHHcCCC----cCc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 4455555543 47779999999999998887754311 011 7788988775 7888999999999743
Q ss_pred EeCCeeE
Q 013240 124 FMHGIPT 130 (447)
Q Consensus 124 ~~~g~~~ 130 (447)
+|+.+
T Consensus 82 --~g~~i 86 (114)
T 2hze_A 82 --GKTSI 86 (114)
T ss_dssp --TTEEE
T ss_pred --CCEEE
Confidence 77655
No 229
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.20 E-value=3.8e-06 Score=73.50 Aligned_cols=43 Identities=21% Similarity=0.458 Sum_probs=36.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~ 104 (447)
..++.+|.|+++||++|+.+.|.+.++.+.+.+ ++.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ---DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC---CeEEEEEecc
Confidence 467899999999999999999999999876643 4888888874
No 230
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.18 E-value=1.9e-05 Score=67.33 Aligned_cols=108 Identities=14% Similarity=0.120 Sum_probs=75.3
Q ss_pred ccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------
Q 013240 37 TKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCG-HCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------- 105 (447)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~-~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~---------- 105 (447)
.....++..+.+.+ | ..++++|.||+.||+ .|....|.+.++.+.+...+.++.+..|+++.
T Consensus 12 ~l~d~~G~~v~l~~--~-----~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~ 84 (170)
T 3me7_A 12 TLVDSYGNEFQLKN--L-----KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRF 84 (170)
T ss_dssp EEEETTCCEEEGGG--G-----TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHH
T ss_pred EEEcCCcCEEchHH--h-----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHH
Confidence 33444555555442 1 268999999999997 69999999999999986544457777777651
Q ss_pred ---------------------chhhhhhCCC---------ccccEEEEEe-CCeeEE-ecCC-CCHHHHHHHHHHhcCC
Q 013240 106 ---------------------YSRLASKQEI---------DAFPTLKIFM-HGIPTE-YYGP-RKAELLVRYLKKFVAP 151 (447)
Q Consensus 106 ---------------------~~~l~~~~~i---------~~~Ptl~~~~-~g~~~~-y~g~-~~~~~i~~fi~~~~~~ 151 (447)
..++++.||+ ...|+++++. +|+... |.|. .+.++|.+.+.+....
T Consensus 85 ~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 85 QKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTC
T ss_pred HHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 1235555553 3457788885 477764 6774 6788898888887654
No 231
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.18 E-value=2.4e-06 Score=69.59 Aligned_cols=68 Identities=16% Similarity=0.209 Sum_probs=50.4
Q ss_pred hhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc---hh----hhhhCCCccccEEE
Q 013240 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---SR----LASKQEIDAFPTLK 122 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~---~~----l~~~~~i~~~Ptl~ 122 (447)
.+.++++++.++ ++.|+++||++|+++.+.+++.. +.+..+|++.+ ++ +++.+++.++|+++
T Consensus 17 ~~~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~---------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 17 VNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp HHHHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT---------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred HHHHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC---------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 455777776654 34499999999999999888752 34556777655 43 78889999999984
Q ss_pred EEeCCeeE
Q 013240 123 IFMHGIPT 130 (447)
Q Consensus 123 ~~~~g~~~ 130 (447)
.+|+.+
T Consensus 86 --i~G~~i 91 (130)
T 2cq9_A 86 --VNGTFI 91 (130)
T ss_dssp --ETTEEE
T ss_pred --ECCEEE
Confidence 477655
No 232
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.17 E-value=2.3e-05 Score=60.94 Aligned_cols=104 Identities=9% Similarity=0.195 Sum_probs=81.9
Q ss_pred CCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
+.+..++.++++.....++++++.|+. .....-......+.++++.+++ +.|+.+|++..+++++.+++ ...|++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~~~Pt~ 79 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWA-EWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSV---LNIPTT 79 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEEC-CCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCc---ccCCEE
Confidence 456788899998887777888887775 4566667788899999999985 99999999999999999999 789999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+++..++....+. +..+.+.+.+|++.++
T Consensus 80 ~~~~~g~~~~~~~------g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 80 LIFVNGQLVDSLV------GAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEETTEEEEEEE------SCCCHHHHHHHHHHHC
T ss_pred EEEcCCcEEEeee------ccCCHHHHHHHHHHHh
Confidence 9995443333333 3345778999998875
No 233
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.16 E-value=2.9e-06 Score=70.45 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=50.5
Q ss_pred hhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc---h----hhhhhCCCccccEEE
Q 013240 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---S----RLASKQEIDAFPTLK 122 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~---~----~l~~~~~i~~~Ptl~ 122 (447)
.+.++++++.+. ++.|+++||++|+++.+.+++.. +.+..+|++.+ + .+++.+++.++|+++
T Consensus 39 ~~~~~~~i~~~~--Vvvf~~~~Cp~C~~~k~~L~~~~---------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 39 VNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred HHHHHHHhcCCC--EEEEECCCChhHHHHHHHHHHcC---------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 466777887653 34499999999999999988753 33556777654 3 378899999999984
Q ss_pred EEeCCeeE
Q 013240 123 IFMHGIPT 130 (447)
Q Consensus 123 ~~~~g~~~ 130 (447)
.+|+.+
T Consensus 108 --i~G~~i 113 (146)
T 2ht9_A 108 --VNGTFI 113 (146)
T ss_dssp --ETTEEE
T ss_pred --ECCEEE
Confidence 477655
No 234
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.16 E-value=5.3e-05 Score=68.51 Aligned_cols=74 Identities=14% Similarity=0.264 Sum_probs=54.8
Q ss_pred cCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhhcCCCCe-EEEEEeCcc----------------------chhhhhhC
Q 013240 59 SFDYILVDFY-APWCGHCK-RLAPQLDEAAPILAKLKEPI-VIAKVDADK----------------------YSRLASKQ 113 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~-~~~p~~~~~a~~l~~~~~~v-~~~~Vd~~~----------------------~~~l~~~~ 113 (447)
..++++|.|| +.||++|. ...|.+.++++.++..+ + .+..|+.+. +.++++.|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG--VDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 3578999999 99999999 89999999999887644 6 677777642 13467777
Q ss_pred CCc-----------cccEEEEEeCCeeEE-ecC
Q 013240 114 EID-----------AFPTLKIFMHGIPTE-YYG 134 (447)
Q Consensus 114 ~i~-----------~~Ptl~~~~~g~~~~-y~g 134 (447)
|+. ..|+.+++++|+... +.|
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~ 142 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIE 142 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEEETTEEEEEEEC
T ss_pred CceeecccccCcccceeEEEEEECCEEEEEEEe
Confidence 775 347766668887664 444
No 235
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.14 E-value=3.1e-05 Score=60.50 Aligned_cols=104 Identities=14% Similarity=0.273 Sum_probs=81.2
Q ss_pred CccccChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 254 LSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 254 ~~~~l~~~~~~~~~-~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
.+..++.+++.... ..++++++.|+. .....-..+...+.++++.+++ +.|+.+|+...+++++.+++ ...|++
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a-~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 80 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSR-KNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSL---KGVPQI 80 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEEC-SSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSCEE
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeC-CCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCC---CcCCEE
Confidence 35678899998866 667788887775 4566667888899999999986 99999999999999999999 789999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
+++..++....+.| ..+.+.+.+|++..+.
T Consensus 81 ~~~~~g~~~~~~~g------~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 81 LYFKDGEYKGKMAG------DVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEETTEEEEEEES------SCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEec------cCCHHHHHHHHHHHhc
Confidence 99965443333333 3456789999988754
No 236
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.13 E-value=4.5e-05 Score=67.70 Aligned_cols=89 Identities=13% Similarity=0.083 Sum_probs=65.9
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----------chhhhh------hCCCcc----
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----------YSRLAS------KQEIDA---- 117 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-----------~~~l~~------~~~i~~---- 117 (447)
..++++|.|||+||+.|+ -.|.+.++.+++...+ +.+..|+|+. -.++|+ ++++.-
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g--~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~ 131 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYG--LVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFE 131 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC--eEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeEe
Confidence 458999999999999998 7899999999987643 8889998852 134565 554320
Q ss_pred ---------------------------------------------ccEEEEE-eCCeeEE-ecCCCCHHHHHHHHHHhcC
Q 013240 118 ---------------------------------------------FPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 118 ---------------------------------------------~Ptl~~~-~~g~~~~-y~g~~~~~~i~~fi~~~~~ 150 (447)
.|+.+++ ++|+++. |.|..+.++|.+.|++++.
T Consensus 132 d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 132 KGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 211 (215)
T ss_dssp CCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGG
T ss_pred eeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 0455655 4577664 7888888888888887753
No 237
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.12 E-value=2.4e-05 Score=60.07 Aligned_cols=102 Identities=13% Similarity=0.181 Sum_probs=78.0
Q ss_pred cccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEe
Q 013240 256 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (447)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~ 335 (447)
..++.+++......++++++.|+. .....-......+.++++.++++.|+.+|++..+++++.+++ ...|+++++.
T Consensus 2 ~~l~~~~~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~~ 77 (104)
T 2e0q_A 2 IHLDSKNFDSFLASHEIAVVDFWA-EWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGV---MSLPTVIFFK 77 (104)
T ss_dssp EECCTTTHHHHHHHSSEEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSCEEEEEE
T ss_pred eecCHHHHHHHHhcCCcEEEEEEC-CCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCc---cccCEEEEEE
Confidence 467788888776667777777775 455666777888999999998899999999999999999999 6799999995
Q ss_pred CCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 336 GNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 336 ~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
.++....+.| ..+.+.+.+|++..+.
T Consensus 78 ~g~~~~~~~g------~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 78 DGEPVDEIIG------AVPREEIEIRIKNLLG 103 (104)
T ss_dssp TTEEEEEEES------CCCHHHHHHHHHHHHT
T ss_pred CCeEhhhccC------CCCHHHHHHHHHHHhc
Confidence 4433333333 3456789999988763
No 238
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.11 E-value=4.9e-06 Score=64.92 Aligned_cols=67 Identities=15% Similarity=0.299 Sum_probs=50.3
Q ss_pred hhHHHhHccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCCccccEE
Q 013240 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPTL 121 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~-----~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~~i~~~Ptl 121 (447)
+.++++++.++ + +.|++ +||++|+++.+.+.+.. +.+..+|.+.++. +.+.+|+.++|++
T Consensus 8 ~~~~~~i~~~~-v-vvf~~g~~~~~~C~~C~~~~~~L~~~~---------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 8 ERLKVLTNKAS-V-MLFMKGNKQEAKCGFSKQILEILNSTG---------VEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp HHHHHHHTSSS-E-EEEESBCSSSBCTTHHHHHHHHHHHHT---------CCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHhccCC-E-EEEEecCCCCCCCccHHHHHHHHHHCC---------CCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 45777776654 3 44777 99999999999887742 5678889988766 4556799999998
Q ss_pred EEEeCCeeE
Q 013240 122 KIFMHGIPT 130 (447)
Q Consensus 122 ~~~~~g~~~ 130 (447)
|.+|+.+
T Consensus 77 --~i~g~~i 83 (105)
T 2yan_A 77 --YVKGELV 83 (105)
T ss_dssp --EETTEEE
T ss_pred --EECCEEE
Confidence 4577654
No 239
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.10 E-value=3.4e-05 Score=61.12 Aligned_cols=104 Identities=10% Similarity=0.144 Sum_probs=79.8
Q ss_pred CCCccccChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCc
Q 013240 252 LPLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 329 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P 329 (447)
.+.....+.++|+.+.. .++++++.|+.. ....-......+.+++++++++.|+.||+++.+++++.+++ ...|
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 86 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSAT-WCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEV---KSMP 86 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECT-TCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC---CSSS
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---cccc
Confidence 45566778888888666 677888877753 56666788889999999998899999999999999999999 7899
Q ss_pred eEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 330 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 330 ~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+++++..++....+.| . +.+.+.+|+++++
T Consensus 87 t~~~~~~G~~~~~~~G------~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 87 TFQFFKKGQKVGEFSG------A-NKEKLEATINELV 116 (116)
T ss_dssp EEEEESSSSEEEEEES------C-CHHHHHHHHHHHC
T ss_pred EEEEEeCCeEEEEEcC------C-CHHHHHHHHHHhC
Confidence 9999954443333333 2 5678999988753
No 240
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.09 E-value=8.6e-06 Score=73.89 Aligned_cols=93 Identities=15% Similarity=0.201 Sum_probs=69.9
Q ss_pred HHhHccCCe-EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc---------------------------
Q 013240 54 DSAISSFDY-ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--------------------------- 105 (447)
Q Consensus 54 ~~~~~~~~~-~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~--------------------------- 105 (447)
.+++..+++ +|+.|+++||+.|....|.+.++++++++.+ +.+..|+++.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~g--v~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~ 104 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLG--VDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADP 104 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECT
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCC--cEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECC
Confidence 455533454 5667889999999999999999999998643 8888888853
Q ss_pred chhhhhhCCCc-------cccEEEEEe-CCeeEE-ecC----CCCHHHHHHHHHHh
Q 013240 106 YSRLASKQEID-------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (447)
Q Consensus 106 ~~~l~~~~~i~-------~~Ptl~~~~-~g~~~~-y~g----~~~~~~i~~fi~~~ 148 (447)
..++++.||+. .+|+++++. +|+... +.| .++.++|.+.+..+
T Consensus 105 ~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 105 QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 34678889987 899999986 476553 333 36788888877665
No 241
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.08 E-value=1.8e-05 Score=70.72 Aligned_cols=89 Identities=12% Similarity=0.201 Sum_probs=67.1
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l 109 (447)
..++++|.|| +.||+.|....|.+.++.+.++..+ +.+..|+++. ..++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKN--VELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 3579999999 9999999999999999999887533 7777777643 1246
Q ss_pred hhhCCC-----ccccEEEEEe-CCeeEE-ecC----CCCHHHHHHHHHHhc
Q 013240 110 ASKQEI-----DAFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKFV 149 (447)
Q Consensus 110 ~~~~~i-----~~~Ptl~~~~-~g~~~~-y~g----~~~~~~i~~fi~~~~ 149 (447)
++.|++ ...|+.+++. +|+.+. +.| .++.+++.+.++.+.
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 667888 3689999996 476554 434 357788888887654
No 242
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.07 E-value=6.5e-06 Score=69.33 Aligned_cols=108 Identities=11% Similarity=0.186 Sum_probs=66.9
Q ss_pred CCcccccccCCCCeEEeChhhHHHhHccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----
Q 013240 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----- 105 (447)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----- 105 (447)
.++.-.....++..+.|++ + ..++++|.|| +.||+.|....|.+.++.++++..+ +.+..|+.+.
T Consensus 9 ~aPdF~l~~~~G~~~~l~d------~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~--~~~v~vs~d~~~~~~ 79 (157)
T 4g2e_A 9 LAPDFELPDTELKKVKLSA------L-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVN--AVVLGISVDPPFSNK 79 (157)
T ss_dssp BCCCCEEEBTTSCEEEGGG------G-TTSCEEEEECSCTTCCC------CCSCGGGGGGGCS--SEEEEEESSCHHHHH
T ss_pred CCcCeEeECCCCCEEeHHH------H-CCCeEEEEecCCCCCCccccchhhcccccccccccC--ceEeeecccchhHHH
Confidence 3444455556666666653 1 3578999998 9999999999999999888877644 6677777643
Q ss_pred ----------------chhhhhhCCCc-----------cccEEEEEe-CCeeEE-e-----cCCCCHHHHHHHHHHh
Q 013240 106 ----------------YSRLASKQEID-----------AFPTLKIFM-HGIPTE-Y-----YGPRKAELLVRYLKKF 148 (447)
Q Consensus 106 ----------------~~~l~~~~~i~-----------~~Ptl~~~~-~g~~~~-y-----~g~~~~~~i~~fi~~~ 148 (447)
+.++++.||+. ..|+.+++. +|+... + .+..+.+++.+.++.+
T Consensus 80 ~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 80 AFKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp HHHHHTTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred HHHHHcCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 23466677764 357777775 475542 2 2345677777777653
No 243
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.05 E-value=3e-06 Score=72.06 Aligned_cols=111 Identities=13% Similarity=0.121 Sum_probs=74.1
Q ss_pred CCcccccccCCCCeEEeChhhHHHhHccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----
Q 013240 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----- 105 (447)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----- 105 (447)
.++.-.....++..+. +.++..+.+++++.|| +.||++|....|.+.++.++++..+ +.+..|+.+.
T Consensus 10 ~aPdF~l~~~~G~~v~-----Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~--v~vv~is~d~~~~~~ 82 (164)
T 4gqc_A 10 KAPDFTLPNQDFEPVN-----LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN--AEVLAISVDSPWCLK 82 (164)
T ss_dssp BCCCCEEEBTTSCEEE-----HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS--SEEEEEESSCHHHHH
T ss_pred CCcCcEeECCCCCEEE-----HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC--ceEEEecCCCHHHHH
Confidence 3344444444555444 3455556788999998 9999999999999998888887654 6677777642
Q ss_pred ----------------chhhhhhCCCc----------cccEEEEEe-CCeeEE-ec-----CCCCHHHHHHHHHHhc
Q 013240 106 ----------------YSRLASKQEID----------AFPTLKIFM-HGIPTE-YY-----GPRKAELLVRYLKKFV 149 (447)
Q Consensus 106 ----------------~~~l~~~~~i~----------~~Ptl~~~~-~g~~~~-y~-----g~~~~~~i~~fi~~~~ 149 (447)
+.++++.||+. ..|+.+++. +|+... +. +..+.+++++-++++.
T Consensus 83 ~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 83 KFKDENRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp HHHHHTTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHhcCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 24567778774 357777775 465542 22 2346778877777654
No 244
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.03 E-value=6.7e-06 Score=62.30 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=51.3
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-----cc----hhhhhhCCCccccEEEEEeCCeeEEecC
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-----KY----SRLASKQEIDAFPTLKIFMHGIPTEYYG 134 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-----~~----~~l~~~~~i~~~Ptl~~~~~g~~~~y~g 134 (447)
++.|+++||++|+++.+.+++.. +.+-.+|.+ .. .++.+.+++.++|++++ +|+. -|
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g---------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~---i~ 79 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG---------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH---VL 79 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE---EE
T ss_pred EEEEECCCChHHHHHHHHHHHcC---------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE---Ee
Confidence 67789999999999988887752 334456665 33 66778899999999987 6743 34
Q ss_pred CCCHHHHHHHHH
Q 013240 135 PRKAELLVRYLK 146 (447)
Q Consensus 135 ~~~~~~i~~fi~ 146 (447)
..+.+.|.+++.
T Consensus 80 G~~~~~l~~~l~ 91 (92)
T 3ic4_A 80 GYNEEKLKELIR 91 (92)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHhc
Confidence 558888888874
No 245
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.03 E-value=3.2e-06 Score=67.52 Aligned_cols=70 Identities=9% Similarity=0.211 Sum_probs=51.5
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCCeEEEEEeCccch-------hhhhhCCCccccEEE
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIVIAKVDADKYS-------RLASKQEIDAFPTLK 122 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~-~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~-------~l~~~~~i~~~Ptl~ 122 (447)
+.++++++..+ ++.|+++||++|+++ .+.+++... ..+.+..+|.+.++ ++++.+|+.++|++
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v- 86 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV------PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI- 86 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC------CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE-
Confidence 45666776544 566999999999998 777665431 12667888887764 58888999999987
Q ss_pred EEeCCeeE
Q 013240 123 IFMHGIPT 130 (447)
Q Consensus 123 ~~~~g~~~ 130 (447)
|.+|+.+
T Consensus 87 -fi~g~~i 93 (118)
T 3c1r_A 87 -YINGKHI 93 (118)
T ss_dssp -EETTEEE
T ss_pred -EECCEEE
Confidence 5688765
No 246
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.03 E-value=4.4e-05 Score=58.95 Aligned_cols=101 Identities=10% Similarity=0.168 Sum_probs=78.5
Q ss_pred CccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
.+..++.++++... .++++++.|+. .....-......+.++++.+++ +.|+.+|+++.+++++.+++ ...|+++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWA-TACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEV---MSIPTLI 78 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEEC-SBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSBSEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEEC-CCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCC---cccCEEE
Confidence 45678888998877 66777777775 4566667888899999999987 99999999999999999999 7799999
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
+++.++....+.| ..+.+.+.+|++..
T Consensus 79 ~~~~G~~~~~~~g------~~~~~~l~~~l~~~ 105 (106)
T 3die_A 79 VFKDGQPVDKVVG------FQPKENLAEVLDKH 105 (106)
T ss_dssp EEETTEEEEEEES------CCCHHHHHHHHHTT
T ss_pred EEeCCeEEEEEeC------CCCHHHHHHHHHHh
Confidence 9975443333333 34567888888754
No 247
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.02 E-value=7.8e-05 Score=61.83 Aligned_cols=109 Identities=16% Similarity=0.181 Sum_probs=84.2
Q ss_pred CCeEEeChhhHHHhHccCCeEEEE-EECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC--ccchhhhhhCCCcc--
Q 013240 43 GKVIELDESNFDSAISSFDYILVD-FYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDA-- 117 (447)
Q Consensus 43 ~~v~~l~~~~f~~~~~~~~~~lV~-f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~--~~~~~l~~~~~i~~-- 117 (447)
.-|..+|.+|...+.+..-+..++ |....-..-..+.+.+.++|+.+++ ++.|+.||. +.+..+.+.+|+..
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg---ki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG---KILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT---TCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC---ceEEEEEecchHhHHHHHHHcCCCccc
Confidence 468899999999998777666555 4433333466788999999988765 499999999 66777889999996
Q ss_pred ccEEEEEeC-CeeEEe--c-CCCCHHHHHHHHHHhcCCCce
Q 013240 118 FPTLKIFMH-GIPTEY--Y-GPRKAELLVRYLKKFVAPDVS 154 (447)
Q Consensus 118 ~Ptl~~~~~-g~~~~y--~-g~~~~~~i~~fi~~~~~~~v~ 154 (447)
.|++.++.. +....| . +..+.+.|.+|+..++...+.
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 899999874 332233 3 788999999999999887664
No 248
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.01 E-value=3.8e-05 Score=60.31 Aligned_cols=104 Identities=12% Similarity=0.297 Sum_probs=79.3
Q ss_pred CCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 252 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
.+....++..+|+.....++++++.|+. .....-......+.+++++++++.|+.+|+...+++++.+++ ...|++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a-~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFA-EWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENI---TSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTC---CSSSEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCC---CcccEE
Confidence 3445678888898877777788877775 456666788888999999998899999999998999999999 789999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+++..++....+.| . +.+.+.+|++.++
T Consensus 84 ~~~~~G~~~~~~~G------~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVDTLLG------A-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEEEEES------C-CHHHHHHHHHTTC
T ss_pred EEEECCcEEEEEeC------C-CHHHHHHHHHHhh
Confidence 88864433333333 2 4678999887654
No 249
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.00 E-value=6.3e-05 Score=61.66 Aligned_cols=105 Identities=6% Similarity=0.072 Sum_probs=79.8
Q ss_pred CCccccChhhHHhhhc------------CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhh
Q 013240 253 PLSVPINQDTLNLLKD------------DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADT 319 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~------------~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~ 319 (447)
+.+..++..+|..... .++++++.|+. .....-......+.++++.+++ +.|+.||++..+++++.
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 100 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYA-DWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARD 100 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEEC-TTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHH
Confidence 3466777777766443 35778877775 3555667778889999999985 99999999999999999
Q ss_pred cCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 320 FEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 320 ~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
|++ ...|++++++.++....+. +..+.+.+.+||+.++.
T Consensus 101 ~~v---~~~Pt~~~~~~~g~~~~~~------G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 101 FGI---QSIPTIWFVPMKGEPQVNM------GALSKEQLKGYIDKVLL 139 (141)
T ss_dssp TTC---CSSSEEEEECSSSCCEEEE------SCCCHHHHHHHHHHTTC
T ss_pred cCC---CCcCEEEEEeCCCCEEEEe------CCCCHHHHHHHHHHHHc
Confidence 999 7899999998765443443 34457799999988765
No 250
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.98 E-value=5.3e-05 Score=62.13 Aligned_cols=107 Identities=15% Similarity=0.219 Sum_probs=68.6
Q ss_pred CCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
+.+..++..++......+..+++.|+. .....-..+...+.+++.++++ +.|+.+|++..+++++.+++ ...|++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~-~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 108 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFA-PWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGV---RSVPTL 108 (140)
T ss_dssp ----------------CCCEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEEC-CCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCC---CccCEE
Confidence 445677778887654444455555554 4566667788889999999984 99999999999999999999 789999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
+++..++....+.| ..+.+.+.+|++.++.|+
T Consensus 109 ~~~~~G~~~~~~~G------~~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 109 VLFRRGAPVATWVG------ASPRRVLEERLRPYLEGR 140 (140)
T ss_dssp EEEETTEEEEEEES------CCCHHHHHHHHHHHHTCC
T ss_pred EEEeCCcEEEEEeC------CCCHHHHHHHHHHHHccC
Confidence 99864433333333 345678999999998774
No 251
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.98 E-value=4.1e-05 Score=67.82 Aligned_cols=89 Identities=13% Similarity=0.215 Sum_probs=66.4
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc----------------------------hhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----------------------------SRL 109 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~----------------------------~~l 109 (447)
..++++|.|| +.||++|....|.+.++.+.++.. .+.+..|+++.. .++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 124 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 124 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHH
Confidence 3579999999 999999999999999999988753 377777776421 245
Q ss_pred hhhCCCc------cccEEEEEe-CCeeEE-ecCC----CCHHHHHHHHHHhc
Q 013240 110 ASKQEID------AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKKFV 149 (447)
Q Consensus 110 ~~~~~i~------~~Ptl~~~~-~g~~~~-y~g~----~~~~~i~~fi~~~~ 149 (447)
++.|++. ..|+.+++. +|+... +.|. ++.+++.+.++.+.
T Consensus 125 ~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 125 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 6677874 689999996 476554 4342 57788888777653
No 252
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.98 E-value=8.5e-05 Score=58.25 Aligned_cols=106 Identities=9% Similarity=0.093 Sum_probs=79.2
Q ss_pred CCccccChhhHHhh-hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 253 PLSVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 253 p~~~~l~~~~~~~~-~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
..+..++.+++... ...++++++.|+. .....-......+.+++..+++ +.|+.+|+...+++++.+++ ...|+
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt 82 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWA-SWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKV---EGVPA 82 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEEC-TTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTC---CSSSE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEEC-CCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCC---CceeE
Confidence 34677888888764 4566778877775 3555557777889999999875 99999999999999999999 68999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
++++..++....+. +..+.+.+.+|++.++.+
T Consensus 83 ~~~~~~G~~~~~~~------g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 83 LRLVKGEQILDSTE------GVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEEEETTEEEEEEE------SCCCHHHHHHHHHHHHC-
T ss_pred EEEEcCCEEEEEec------CCCCHHHHHHHHHHHhcC
Confidence 99994333332333 334567999999988764
No 253
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.98 E-value=5.6e-06 Score=62.35 Aligned_cols=56 Identities=20% Similarity=0.414 Sum_probs=44.8
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhC-CCccccEEEEEeCCeeE
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQ-EIDAFPTLKIFMHGIPT 130 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~--~~~~l~~~~-~i~~~Ptl~~~~~g~~~ 130 (447)
++.|+++||++|+++.+.+++.. +.+..+|.+ ...++.+.+ ++.++|+++ .+|+.+
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~~---------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~i 66 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKKG---------VKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYHV 66 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHHT---------CCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEEC
T ss_pred EEEEECCCChhHHHHHHHHHHcC---------CCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEEE
Confidence 67899999999999998887642 556778887 567788888 999999985 477543
No 254
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.98 E-value=0.00011 Score=60.91 Aligned_cols=105 Identities=10% Similarity=0.158 Sum_probs=82.5
Q ss_pred CccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
.+..++.+++......++++++.|+.. ....-..+...+.++++.+.+ +.|+.||.++.+++++.|++ ...|+++
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 114 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAP-WCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRI---RSIPTIM 114 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECS-SCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECC-CCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCC---CccCEEE
Confidence 356788888888777778888888753 555667778889999999865 99999999999999999999 7899999
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
+++.++....+. +..+.+.+.+|++..+..
T Consensus 115 ~~~~G~~~~~~~------G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 115 LYRNGKMIDMLN------GAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEETTEEEEEES------SCCCHHHHHHHHHHHHHS
T ss_pred EEECCeEEEEEe------CCCCHHHHHHHHHHHhcc
Confidence 997544333343 345578999999998765
No 255
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.97 E-value=2.2e-05 Score=64.53 Aligned_cols=110 Identities=12% Similarity=0.111 Sum_probs=85.0
Q ss_pred CCccccChhhHH-hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 253 PLSVPINQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 253 p~~~~l~~~~~~-~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
..+..++.++|. .+...++++++.|+. .....-..+...+.++++.+++ +.|+.||++..+++++.+++ ...|+
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 81 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYS-PACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGV---QGTPT 81 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTC---CEESE
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCC---CcCCE
Confidence 456788888998 566667888887775 3566667888889999999887 99999999999999999999 78999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
++++..++....+.| ..+.+.+.+|++.++...-..
T Consensus 82 ~~~~~~G~~~~~~~G------~~~~~~l~~~l~~~l~~~~~~ 117 (140)
T 3hz4_A 82 FKFFCHGRPVWEQVG------QIYPSILKNAVRDMLQHGEEC 117 (140)
T ss_dssp EEEEETTEEEEEEES------SCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcC------CCCHHHHHHHHHHHhcccccC
Confidence 999965443333433 345679999999998764443
No 256
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.97 E-value=4.3e-05 Score=59.28 Aligned_cols=103 Identities=7% Similarity=0.144 Sum_probs=78.0
Q ss_pred ccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 255 ~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
+.+++.+++..+...++++++.|+. .....-......+.++++.+++ +.|+.+|+...+++++.+++ ...|++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 78 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWA-EWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRV---MSIPTVIL 78 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEEC-TTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ceEccHhHHHHHhcCCCeEEEEEEC-CCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCC---CcCCEEEE
Confidence 4567888888777777788877775 4566667778889999999885 99999999998999999999 78999999
Q ss_pred EeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 334 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 334 ~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
+..++....+. +..+.+.+.+|++..+.
T Consensus 79 ~~~g~~~~~~~------g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 79 FKDGQPVEVLV------GAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EETTEEEEEEE------SCCCHHHHHHHHHTTC-
T ss_pred EeCCcEeeeEe------CCCCHHHHHHHHHHHhh
Confidence 95443332333 33456789999987654
No 257
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.97 E-value=5.7e-05 Score=64.98 Aligned_cols=88 Identities=14% Similarity=0.150 Sum_probs=64.5
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc---------------------chhhhhhCCCc
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------------------YSRLASKQEID 116 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~---------------------~~~l~~~~~i~ 116 (447)
..++++|.|| +.||+.|....|.+.++.+.++..+ +.+..|+++. +.++++.|++.
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~--~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~ 127 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQIN--ATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVI 127 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTT--EEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCc
Confidence 3468899998 9999999999999999999987643 7777787753 24577778886
Q ss_pred c------------ccEEEEEe-CCeeEE-ecC---CCCHHHHHHHHHHh
Q 013240 117 A------------FPTLKIFM-HGIPTE-YYG---PRKAELLVRYLKKF 148 (447)
Q Consensus 117 ~------------~Ptl~~~~-~g~~~~-y~g---~~~~~~i~~fi~~~ 148 (447)
. .|+.+++. +|+... +.+ ....+++.+.++++
T Consensus 128 ~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 128 KEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 4 58888885 576654 433 23456666666554
No 258
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.97 E-value=0.0001 Score=65.00 Aligned_cols=61 Identities=21% Similarity=0.251 Sum_probs=45.5
Q ss_pred cccccccCC-CCeEEeChhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc
Q 013240 34 EEETKFKID-GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (447)
Q Consensus 34 ~~~~~~~~~-~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~ 104 (447)
++-.....+ +..+.|.+ | ..+++||.||++||+.| .-.|.+.++.+.+++.+ +.+..|+|+
T Consensus 18 pdF~l~d~~~G~~v~Ls~--~-----kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g--~~vlgvs~d 79 (207)
T 2r37_A 18 YEYGALTIDGEEYIPFKQ--Y-----AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG--LVILGFPCN 79 (207)
T ss_dssp GGCEEEBTTSSCEEEGGG--G-----TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT--EEEEEEECC
T ss_pred CCeEeeeCCCCCEEcHHH--h-----CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC--EEEEEEECc
Confidence 333444455 56666543 2 45899999999999999 67899999999987643 888889875
No 259
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.96 E-value=4.7e-05 Score=58.79 Aligned_cols=102 Identities=10% Similarity=0.217 Sum_probs=76.4
Q ss_pred ccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 255 ~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
+..++.+++......++++++.|+. .....-......+.++++.+++ +.|+.+|+++.+++++.+|+ ...|++++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 77 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWA-AWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGI---MSIPTLIL 77 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCC---ccccEEEE
Confidence 3467788888777777888887775 4556667778889999999876 99999999998999999999 67999999
Q ss_pred EeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 334 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 334 ~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+..++....+.| ..+.+.+.+|++..+
T Consensus 78 ~~~G~~~~~~~G------~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 78 FKGGRPVKQLIG------YQPKEQLEAQLADVL 104 (105)
T ss_dssp EETTEEEEEEES------CCCHHHHHHHTTTTT
T ss_pred EeCCeEEEEEec------CCCHHHHHHHHHHHh
Confidence 854433323333 334567888886654
No 260
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.94 E-value=8.5e-05 Score=57.25 Aligned_cols=97 Identities=9% Similarity=0.171 Sum_probs=74.5
Q ss_pred ChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeC
Q 013240 259 NQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 336 (447)
Q Consensus 259 ~~~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~ 336 (447)
+.+.++.... .++++++.|+. .....-......+.++++.++++.|+.+|+++.+++++.+++ ...|+++++..
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~ 82 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSA-TWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEV---KSMPTFQFFKK 82 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTC---CBSSEEEEEET
T ss_pred CHHHHHHHHHhcCCCeEEEEEEC-CCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCC---CcCcEEEEEEC
Confidence 4566766555 56778877775 456666788889999999998999999999999999999999 78999999965
Q ss_pred CccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 337 NENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 337 ~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
++....+.| . +.+.+.+|+++++
T Consensus 83 g~~~~~~~g------~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 83 GQKVGEFSG------A-NKEKLEATINELV 105 (105)
T ss_dssp TEEEEEEES------S-CHHHHHHHHHHHC
T ss_pred CeEEEEEeC------C-CHHHHHHHHHHhC
Confidence 544333333 2 5678999988753
No 261
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.94 E-value=6.6e-05 Score=60.39 Aligned_cols=103 Identities=11% Similarity=0.113 Sum_probs=78.8
Q ss_pred ccccCh-hhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 255 SVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 255 ~~~l~~-~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
+.+++. ++|+.....++++++.|+. .....-..+...+.+++++++++.|+.+|+++.+++++.+++ ...|++++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a-~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTA-VWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRV---LQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEEC-TTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEEC-CcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CcccEEEE
Confidence 556666 8888776777888887875 355666777888999999998899999999999999999999 78999988
Q ss_pred EeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 334 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 334 ~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
+..++....+.| .+.+.+.+|++.++..
T Consensus 97 ~~~G~~~~~~~G-------~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 97 ARSGKMLGHVIG-------ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp EETTEEEEEEES-------SCHHHHHHHHHHHHHC
T ss_pred EeCCeEEEEEeC-------CCHHHHHHHHHHHhcC
Confidence 854433333333 2457899999888753
No 262
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.94 E-value=9.3e-05 Score=58.91 Aligned_cols=106 Identities=10% Similarity=0.143 Sum_probs=79.5
Q ss_pred CCCccccChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCC
Q 013240 252 LPLSVPINQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 327 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~----~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~ 327 (447)
.+.+..++.++++.... .++++++.|+. .....-......|.+++++++++.|+.+|+++.+++++.+++ ..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 87 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTA-SWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSV---EA 87 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCC---Cc
Confidence 45566778888876443 46788877775 455666777888999999998899999999999999999999 78
Q ss_pred CceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 328 LPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 328 ~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
.|+++++..++....+.| .. .+.+.+|++..+.+
T Consensus 88 ~Pt~~~~~~G~~~~~~~G------~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 88 MPTFLFMKEGDVKDRVVG------AI-KEELTAKVGLHAAA 121 (122)
T ss_dssp SSEEEEEETTEEEEEEES------SC-HHHHHHHHHHHHSC
T ss_pred ccEEEEEeCCEEEEEEeC------cC-HHHHHHHHHHHhcc
Confidence 999988854433333332 23 67899999988754
No 263
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.94 E-value=0.00015 Score=56.51 Aligned_cols=99 Identities=10% Similarity=0.200 Sum_probs=77.5
Q ss_pred cccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEe
Q 013240 256 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (447)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~ 335 (447)
...+.++|+.....++++++.|+.+ ....-......+.+++++++++.|+.+|++..+++++.+++ ...|++++++
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~ 85 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYAT-WCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEV---SAMPTLLLFK 85 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEEEE
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECC-cCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CccCEEEEEE
Confidence 3566788888777788888888753 56666778889999999999999999999999999999999 7899999998
Q ss_pred CCccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 336 GNENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 336 ~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
.++....+.| . +.+.|.++++.+
T Consensus 86 ~G~~~~~~~G------~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 86 NGKEVAKVVG------A-NPAAIKQAIAAN 108 (109)
T ss_dssp TTEEEEEEES------S-CHHHHHHHHHHH
T ss_pred CCEEEEEEeC------C-CHHHHHHHHHhh
Confidence 5433333333 1 357899988765
No 264
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.92 E-value=1.2e-05 Score=63.53 Aligned_cols=68 Identities=15% Similarity=0.368 Sum_probs=48.0
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc----hh----hhhhCCCccccEEE
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----SR----LASKQEIDAFPTLK 122 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~----~~----l~~~~~i~~~Ptl~ 122 (447)
+.++++++.++ ++.|+++||++|+++.+.+++.. +.+..+|.+.. ++ +.+..|..++|++
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~---------i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i- 77 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRLG---------VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV- 77 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHTT---------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHcC---------CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE-
Confidence 44566666655 67799999999999998887632 44556677642 33 5556799999998
Q ss_pred EEeCCeeEE
Q 013240 123 IFMHGIPTE 131 (447)
Q Consensus 123 ~~~~g~~~~ 131 (447)
|.+|+.+.
T Consensus 78 -fi~g~~ig 85 (113)
T 3rhb_A 78 -FVCGKHIG 85 (113)
T ss_dssp -EETTEEEE
T ss_pred -EECCEEEc
Confidence 56786553
No 265
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.91 E-value=0.00015 Score=55.79 Aligned_cols=102 Identities=9% Similarity=0.175 Sum_probs=75.7
Q ss_pred ccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 255 ~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
+..++.+++.. +...++++++.|+. .....-......+.++++++++ +.|+.+|+++.+++++.+++ ...|+++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 77 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWA-PWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNI---RSIPTVL 77 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEEC-CCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCC---CcccEEE
Confidence 34677788877 44456778777775 4566667778889999999886 99999999998999999999 7899998
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
++..++....+. +..+.+.+.++++.++
T Consensus 78 ~~~~g~~~~~~~------G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 78 FFKNGERKESII------GAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEETTEEEEEEE------ECCCHHHHHHHHHHHC
T ss_pred EEeCCeEEEEEe------cCCCHHHHHHHHHhhC
Confidence 886443333332 3345678999988753
No 266
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.91 E-value=0.00011 Score=56.75 Aligned_cols=102 Identities=14% Similarity=0.248 Sum_probs=76.2
Q ss_pred ccccChhhHHhh-hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 255 SVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 255 ~~~l~~~~~~~~-~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
+..++.+++... ...++++++.|+. .....-......+.++++++++ +.|+.+|++..+++++.+|+ ...|+++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWA-PWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGI---RSIPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTC---CSSCEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEEC-CCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCC---CcCCEEE
Confidence 456788888774 4556777777775 4556667778889999999875 99999999998999999999 6899998
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
++..++....+. +..+.+.+.++++.++
T Consensus 79 ~~~~G~~~~~~~------G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETII------GAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEE------SCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEe------CCCCHHHHHHHHHHHh
Confidence 885443333333 3345678999998775
No 267
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.91 E-value=0.0001 Score=58.62 Aligned_cols=109 Identities=11% Similarity=0.128 Sum_probs=81.2
Q ss_pred CccccChhhHH-hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 254 LSVPINQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 254 ~~~~l~~~~~~-~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
.+..++.+++. .+...++++++.|+. .....-......+.++++.++ ++.|+.+|+...+++++.+++ ...|++
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a-~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~ 79 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYA-PWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSV 79 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCC---CccceE
Confidence 35678888885 466667788887775 355666777888999999887 499999999999999999999 689999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
++++.++....+.|.. .+..+.+.+.+|++..++.
T Consensus 80 ~~~~~~~~~~~~~g~~--~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQ--INSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEEGGGTEEEEEE--ECCSCHHHHHHHHHHHHHC
T ss_pred EEEeCCCccceeeccc--cCcCCHHHHHHHHHHHHHh
Confidence 9997754332232210 0124678999999998764
No 268
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.91 E-value=7.9e-05 Score=62.45 Aligned_cols=104 Identities=12% Similarity=0.203 Sum_probs=79.4
Q ss_pred ccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 255 ~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
+..++..+|......++++++.|+. .....-..+...|.++++++.+ +.|+.||+++.+++++.+++ ...|++++
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a-~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i---~~~Pt~~~ 124 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWA-PWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRI---QGIPAFIL 124 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTC---CSSSEEEE
T ss_pred CccCCHHHHHHHHhCCCcEEEEEEC-CCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCC---CcCCEEEE
Confidence 4577888888766666788887875 3555667778889999998874 99999999999999999999 78999999
Q ss_pred EeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 334 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 334 ~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
+..++....+.| ..+.+.|.+|++..+..
T Consensus 125 ~~~G~~~~~~~G------~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 125 FHKGRELARAAG------ARPASELVGFVRGKLGA 153 (155)
T ss_dssp EETTEEEEEEES------CCCHHHHHHHHHHHHC-
T ss_pred EeCCeEEEEecC------CCCHHHHHHHHHHHhcc
Confidence 964433333333 34567999999998765
No 269
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.90 E-value=7.3e-05 Score=64.74 Aligned_cols=88 Identities=18% Similarity=0.102 Sum_probs=65.0
Q ss_pred CCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-------------------------hhhhhhC
Q 013240 60 FDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-------------------------SRLASKQ 113 (447)
Q Consensus 60 ~~~~lV~f~~-~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-------------------------~~l~~~~ 113 (447)
.++++|.||+ .||+.|....|.+.++.+.++..+ +.+..|+++.. .++++.|
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~y 107 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLG--VDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNF 107 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTT--EEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHT
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHh
Confidence 5799999995 999999999999999999887643 77777776521 2355667
Q ss_pred CCc------cccEEEEEe-CCeeEE-ecCC----CCHHHHHHHHHHhc
Q 013240 114 EID------AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKKFV 149 (447)
Q Consensus 114 ~i~------~~Ptl~~~~-~g~~~~-y~g~----~~~~~i~~fi~~~~ 149 (447)
++. ..|+.+++. +|+... +.|. ++.+++.+.++.+.
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 776 369999996 576654 5443 36788888776654
No 270
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.90 E-value=0.00013 Score=56.06 Aligned_cols=95 Identities=16% Similarity=0.239 Sum_probs=71.7
Q ss_pred hhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCc
Q 013240 261 DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE 338 (447)
Q Consensus 261 ~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~ 338 (447)
++++.... .++++++.|+. .....-......+.++++.++++.|+.+|++..+++++.+++ ...|++++++.++
T Consensus 8 ~~~~~~l~~~~~~~~~v~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~~~g~ 83 (104)
T 2vim_A 8 ADLEKLINENKGRLIVVDFFA-QWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSV---TAMPTFVFIKDGK 83 (104)
T ss_dssp HHHHHHHHTTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEEEETTE
T ss_pred HHHHHHHHhcCCCeEEEEEEC-CCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCC---ccccEEEEEeCCc
Confidence 67766555 56777777775 455666777888999999998899999999999999999999 6899999887544
Q ss_pred cceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 339 NYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 339 ~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
......| .+.+.+.+|+++++
T Consensus 84 ~~~~~~G-------~~~~~l~~~l~~~l 104 (104)
T 2vim_A 84 EVDRFSG-------ANETKLRETITRHK 104 (104)
T ss_dssp EEEEEES-------SCHHHHHHHHHHHC
T ss_pred EEEEEeC-------CCHHHHHHHHHhhC
Confidence 3333333 24668999988753
No 271
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.89 E-value=0.00019 Score=57.01 Aligned_cols=105 Identities=13% Similarity=0.160 Sum_probs=78.6
Q ss_pred CCCccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCc
Q 013240 252 LPLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 329 (447)
Q Consensus 252 ~p~~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P 329 (447)
-+.+..++.++|.. +...++++++.|+. .....-......|.++++++.+ +.|+.+|+++.+++++.+++ ...|
T Consensus 12 ~~~~~~~~~~~f~~~v~~~~k~vlv~f~a-~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 87 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNSETPVVVDFHA-QWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEV---SAVP 87 (119)
T ss_dssp CSEEECCSHHHHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTC---CSSS
T ss_pred ceEEEecChhhHHHHHHcCCCcEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCC---Cccc
Confidence 44567888888876 44566788877775 4556667778889999998865 99999999998999999999 7799
Q ss_pred eEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 330 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 330 ~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+++++..++....+. +..+.+.+.+|++.++
T Consensus 88 t~~~~~~G~~~~~~~------G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFV------GIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETTEEEEEEE------SCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEc------CCCCHHHHHHHHHHHh
Confidence 999995433332333 3345678999998775
No 272
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.89 E-value=0.00016 Score=58.93 Aligned_cols=105 Identities=7% Similarity=0.090 Sum_probs=79.1
Q ss_pred ccccChhhHHhhhc------------CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcC
Q 013240 255 SVPINQDTLNLLKD------------DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFE 321 (447)
Q Consensus 255 ~~~l~~~~~~~~~~------------~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~ 321 (447)
+..++.++|..... .++++++.|+. .....-......|.++++++++ +.|+.+|+++.+++++.++
T Consensus 11 v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a-~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~ 89 (136)
T 2l5l_A 11 VIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYA-DWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFG 89 (136)
T ss_dssp EEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEEC-TTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTT
T ss_pred eEEecchHHHHHHHhhccCccceeecCCCEEEEEEEC-CcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcC
Confidence 45667777766433 34677777765 4566667778889999999875 9999999999899999999
Q ss_pred CCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 322 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
+ ...|++++++.+++...+. +..+.+.+.+|++......
T Consensus 90 v---~~~Pt~~~~~~~G~~~~~~------G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 90 I---RSIPSILFIPMEGKPEMAQ------GAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp C---CSSCEEEEECSSSCCEEEE------SCCCHHHHHHHHHHHHTSC
T ss_pred C---CCCCEEEEECCCCcEEEEe------CCCCHHHHHHHHHHHhhcc
Confidence 9 6799999997765433333 3445789999999887654
No 273
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.89 E-value=0.0002 Score=60.93 Aligned_cols=110 Identities=16% Similarity=0.203 Sum_probs=72.9
Q ss_pred CcccccccCCCCeEEeChhhHHHhHccCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-----
Q 013240 33 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCG-HCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----- 106 (447)
Q Consensus 33 ~~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~~~~C~-~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~----- 106 (447)
.++-.+...++..+.|.+ + ..++++|.||.+||+ .|....+.+.++.+.++..+.++.+..|.++-+
T Consensus 12 ~PdF~L~d~~G~~v~l~d------~-~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~ 84 (170)
T 4hde_A 12 LETFQFTNQDGKPFGTKD------L-KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPE 84 (170)
T ss_dssp CCCCEEECTTSCEEEHHH------H-TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHH
T ss_pred CCCcEEECCCCCEEeHHH------h-CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHH
Confidence 344444555565555432 2 468999999999996 799999999999998877666788888887532
Q ss_pred --hhhhhhCCCc------------------------------------cccEEEEEe-CCeeEE-ecCC--CCHHHHHHH
Q 013240 107 --SRLASKQEID------------------------------------AFPTLKIFM-HGIPTE-YYGP--RKAELLVRY 144 (447)
Q Consensus 107 --~~l~~~~~i~------------------------------------~~Ptl~~~~-~g~~~~-y~g~--~~~~~i~~f 144 (447)
++.+++|+.. ..|+++++. +|+... |.|. ...+.|.+-
T Consensus 85 ~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ 164 (170)
T 4hde_A 85 NLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRD 164 (170)
T ss_dssp HHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHH
Confidence 1234444321 125677774 476665 6663 456777777
Q ss_pred HHHhc
Q 013240 145 LKKFV 149 (447)
Q Consensus 145 i~~~~ 149 (447)
+++++
T Consensus 165 ik~Ll 169 (170)
T 4hde_A 165 MKRLA 169 (170)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76654
No 274
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.89 E-value=0.00016 Score=55.94 Aligned_cols=102 Identities=15% Similarity=0.225 Sum_probs=76.3
Q ss_pred ccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 255 ~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
+..++.+++.. +...++++++.|+. .....-......+.++++.+++ +.|+.+|+...+++++.+++ ...|+++
T Consensus 4 v~~l~~~~f~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 79 (108)
T 2trx_A 4 IIHLTDDSFDTDVLKADGAILVDFWA-EWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTLL 79 (108)
T ss_dssp EEECCTTTHHHHTTTCSSEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTC---CSSSEEE
T ss_pred ceecchhhHHHHHHhcCCeEEEEEEC-CCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---cccCEEE
Confidence 55778888874 44556777777765 4566667778889999999875 99999999988999999999 7899999
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
++..++....+. +..+.+.+.+|++..+
T Consensus 80 ~~~~G~~~~~~~------G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 80 LFKNGEVAATKV------GALSKGQLKEFLDANL 107 (108)
T ss_dssp EEETTEEEEEEE------SCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEe------cCCCHHHHHHHHHHhh
Confidence 985433333333 3345678999998765
No 275
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.88 E-value=1.8e-05 Score=65.64 Aligned_cols=81 Identities=19% Similarity=0.264 Sum_probs=59.9
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEe------------------------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD------------------------------------ 102 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd------------------------------------ 102 (447)
+.+..++.|+.++|++|+++.+.++++ . ++.+...+
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~----~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T----DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C----SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C----ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 457889999999999999999987653 1 13333221
Q ss_pred ------C----ccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhcC
Q 013240 103 ------A----DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 103 ------~----~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
| +.+.++++++||+++||+++ .+|+ ...|....+.|.+++.+...
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~--~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR--TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC--EEESCCCTTHHHHHHHHTSC
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE--EeeCCCCHHHHHHHHHHHHH
Confidence 1 12456888999999999998 6676 36788888888888877643
No 276
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.87 E-value=4.2e-05 Score=56.28 Aligned_cols=67 Identities=12% Similarity=0.183 Sum_probs=47.9
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCCccccEEEEEeCCeeEEecCCCCHH
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPTLKIFMHGIPTEYYGPRKAE 139 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~ 139 (447)
++.|+++||++|+++.+.+.+. + +.+..+|++.+++ +.+.+++.++|+++ .+|+.+. | .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~----i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i~--g---~~ 66 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-----G----VSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHIG--G---YD 66 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----T----CCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEEE--S---HH
T ss_pred EEEEECCCChhHHHHHHHHHHC-----C----CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEEe--C---HH
Confidence 6779999999999998888763 2 5566778776543 56678999999984 4776542 2 35
Q ss_pred HHHHHHH
Q 013240 140 LLVRYLK 146 (447)
Q Consensus 140 ~i~~fi~ 146 (447)
.|.++++
T Consensus 67 ~i~~~~~ 73 (82)
T 1fov_A 67 DLYALDA 73 (82)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5666554
No 277
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.87 E-value=0.00022 Score=57.21 Aligned_cols=103 Identities=11% Similarity=0.152 Sum_probs=77.0
Q ss_pred CCccccChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhC------CCceEEEEeccchHhHHhhcCCCCC
Q 013240 253 PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASAN------RELVFCYVGIKQFADFADTFEANKK 325 (447)
Q Consensus 253 p~~~~l~~~~~~~~~-~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~------~~~~f~~vd~~~~~~~~~~~~i~~~ 325 (447)
..+..++.++|+... ..++++++.|+. .....-..+...+.++|..+ .++.|+.||+.+.+++++.+++
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v--- 90 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFVLYYV-PWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRV--- 90 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTC---
T ss_pred CceEECChhhHHHHHhCCCCCEEEEEEC-CccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCC---
Confidence 456788999998866 346777777775 35556677777888887643 2399999999999999999999
Q ss_pred CCCceEEEEeCCccc--eecCCCCCCCcccchhHHHHHHHHH
Q 013240 326 SKLPKMVVWDGNENY--LTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 326 ~~~P~vvi~~~~~~y--~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
..+|++++++.++.. ..+. +..+.+.|.+|+++.
T Consensus 91 ~~~Pt~~~~~~g~~~~~~~~~------G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 91 SGFPTMRYYTRIDKQEPFEYS------GQRYLSLVDSFVFQN 126 (127)
T ss_dssp CSSSEEEEECSSCSSSCEECC------SCCCHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCCCCceEec------CCccHHHHHHHHHhc
Confidence 789999999875432 2333 445678999999764
No 278
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.86 E-value=5.7e-05 Score=63.77 Aligned_cols=71 Identities=8% Similarity=0.027 Sum_probs=51.7
Q ss_pred cCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhhcCCCCeE-EEEEeCc-----------------------cchhhhhh
Q 013240 59 SFDYILVDFY-APWCGHCK-RLAPQLDEAAPILAKLKEPIV-IAKVDAD-----------------------KYSRLASK 112 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~-~~~p~~~~~a~~l~~~~~~v~-~~~Vd~~-----------------------~~~~l~~~ 112 (447)
+.++++|.|| +.||+.|. ...|.+.++.++++..+ +. +..|+.+ .+.++++.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~--v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG--VTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHA 111 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHH
Confidence 3578999999 89999999 89999999999887544 44 5555543 22346667
Q ss_pred CCCc------c-----ccEEEEEeCCeeEE
Q 013240 113 QEID------A-----FPTLKIFMHGIPTE 131 (447)
Q Consensus 113 ~~i~------~-----~Ptl~~~~~g~~~~ 131 (447)
||+. + .|+.+++.+|+...
T Consensus 112 ~gv~~~~~~~g~~~~~~p~~~vid~G~i~~ 141 (162)
T 1tp9_A 112 LGLELDLQEKGLGTRSRRFALLVDDLKVKA 141 (162)
T ss_dssp TTCEEEETTTTSEEEECCEEEEEETTEEEE
T ss_pred cCcccccccCCCCccceeEEEEEECCEEEE
Confidence 7775 2 68888887776543
No 279
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.86 E-value=8.7e-05 Score=59.83 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=77.8
Q ss_pred CccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 254 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 254 ~~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
.+..++.++|+. +...++++++.|+.. ....-......+.++++++++ +.|+.+|++...++++.+++ ...|++
T Consensus 18 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~ 93 (130)
T 2dml_A 18 DVIELTPSNFNREVIQSDGLWLVEFYAP-WCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGV---QGFPTI 93 (130)
T ss_dssp SSEECCTTTHHHHTTTCSSCEEEEEECT-TCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTC---CSSSEE
T ss_pred CcEECCHHHHHHHHhcCCCeEEEEEECC-CCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCC---CccCEE
Confidence 456778888877 545667888777753 444445556678888888887 99999999999999999999 789999
Q ss_pred EEEeCCcc-ceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 332 VVWDGNEN-YLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 332 vi~~~~~~-y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
++++.++. ...+. +..+.+.+.+|+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~------G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 94 KIFGANKNKPEDYQ------GGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEESSCTTSCEECC------SCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEee------cCCCHHHHHHHHHHHHh
Confidence 99998654 33343 34456789999887653
No 280
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.85 E-value=3.9e-05 Score=66.86 Aligned_cols=42 Identities=19% Similarity=0.397 Sum_probs=33.3
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA 103 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~ 103 (447)
..++.++.|+.+||++|..+.|.+.++.+.+.. ++.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS---DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC---ceEEEEecc
Confidence 357889999999999999999999998876532 466665553
No 281
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.84 E-value=5e-06 Score=72.82 Aligned_cols=44 Identities=18% Similarity=0.394 Sum_probs=38.0
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeCccc
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKY 106 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~~~~ 106 (447)
.++++|.||+.||+||+++.|.| +++++.+.+ +|.|.+++.+.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~---~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE---GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT---TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC---CCEEEEeccCcC
Confidence 47899999999999999999999 988877643 588999998754
No 282
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.84 E-value=0.00011 Score=66.35 Aligned_cols=88 Identities=13% Similarity=0.229 Sum_probs=66.6
Q ss_pred cCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc----------------------------hhh
Q 013240 59 SFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----------------------------SRL 109 (447)
Q Consensus 59 ~~~~~lV~f~~-~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~----------------------------~~l 109 (447)
..++++|.||+ .||+.|....|.+.++++.++..+ +.+..|+++.. .++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~g--v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v 153 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAIN--TEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQI 153 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHH
Confidence 35799999999 999999999999999999997643 77888887531 246
Q ss_pred hhhCCCc------cccEEEEEeC-CeeEE-ecC----CCCHHHHHHHHHHh
Q 013240 110 ASKQEID------AFPTLKIFMH-GIPTE-YYG----PRKAELLVRYLKKF 148 (447)
Q Consensus 110 ~~~~~i~------~~Ptl~~~~~-g~~~~-y~g----~~~~~~i~~fi~~~ 148 (447)
++.||+. .+|+.+++.. |+... +.+ .+..+++.+.++.+
T Consensus 154 ~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 154 SKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 7778887 6899999964 66543 333 45677777776554
No 283
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.84 E-value=4.4e-05 Score=59.18 Aligned_cols=98 Identities=7% Similarity=0.112 Sum_probs=64.0
Q ss_pred ChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCc
Q 013240 259 NQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE 338 (447)
Q Consensus 259 ~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~ 338 (447)
+.++++.....++++++.|+.+ ....-......+.+++++++++.|+.+|+++.+++++.+++ ...|++++++.++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTE-NCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAV---FTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEES-SCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC------------CCCCEEEEEETTE
T ss_pred CHHHHHHHHhcCCCEEEEEeCC-CCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCC---CCCCEEEEEeCCe
Confidence 3455666556677888777764 55666778889999999998899999999999999999999 7899999997543
Q ss_pred cceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 339 NYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 339 ~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
....+. +..+.+.+.++++.++
T Consensus 83 ~~~~~~------g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EILRES------RFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEEE------SSCCHHHHHHHHHTTC
T ss_pred EEEEEe------CCcCHHHHHHHHHHhh
Confidence 333333 3345678999887654
No 284
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.82 E-value=0.00019 Score=55.78 Aligned_cols=100 Identities=8% Similarity=0.145 Sum_probs=76.7
Q ss_pred CccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC----CceEEEEeccchHhHHhhcCCCCCCCCc
Q 013240 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----ELVFCYVGIKQFADFADTFEANKKSKLP 329 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~----~~~f~~vd~~~~~~~~~~~~i~~~~~~P 329 (447)
.+..++.++++.... ++++++.|+. .....-......+.++++.+. ++.|+.+|+...+++++.+++ ...|
T Consensus 6 ~v~~l~~~~~~~~~~-~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~P 80 (111)
T 3uvt_A 6 TVLALTENNFDDTIA-EGITFIKFYA-PWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSV---RGYP 80 (111)
T ss_dssp CSEECCTTTHHHHHH-SSEEEEEEEC-SSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred cceEcChhhHHHHhc-CCcEEEEEEC-CCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCC---Cccc
Confidence 466788899988766 5677776765 456666778888999998864 499999999999999999999 7899
Q ss_pred eEEEEeCCccceecCCCCCCCcccchhHHHHHHHH
Q 013240 330 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 364 (447)
Q Consensus 330 ~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~ 364 (447)
+++++..++....+.| ..+.+.+.+|+.+
T Consensus 81 t~~~~~~g~~~~~~~g------~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 81 TLLLFRGGKKVSEHSG------GRDLDSLHRFVLS 109 (111)
T ss_dssp EEEEEETTEEEEEECS------CCSHHHHHHHHHH
T ss_pred EEEEEeCCcEEEeccC------CcCHHHHHHHHHh
Confidence 9999965544334433 3457789999875
No 285
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.82 E-value=0.00016 Score=61.04 Aligned_cols=85 Identities=12% Similarity=0.064 Sum_probs=57.9
Q ss_pred cCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc-----------------------chhhhhhCC
Q 013240 59 SFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----------------------YSRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~~-~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~-----------------------~~~l~~~~~ 114 (447)
..++++|.||+ .||++|....|.+.++.+.+ ..+.+..|+++. +.++++.|+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~----~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~g 116 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL----DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYA 116 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC----TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc----CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhC
Confidence 35799999994 99999999999999988776 237777777642 234555566
Q ss_pred Cc----cc--cEEEEEe-CCeeEE-ecCC-----CCHHHHHHHHHH
Q 013240 115 ID----AF--PTLKIFM-HGIPTE-YYGP-----RKAELLVRYLKK 147 (447)
Q Consensus 115 i~----~~--Ptl~~~~-~g~~~~-y~g~-----~~~~~i~~fi~~ 147 (447)
+. ++ |+.+++. +|+... +.|. ...+++.+.+++
T Consensus 117 v~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 117 LLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp CBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred CccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 65 33 8888885 466554 4442 234666666654
No 286
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.81 E-value=3.1e-05 Score=59.57 Aligned_cols=60 Identities=12% Similarity=0.171 Sum_probs=45.5
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhh----C-CCccccEEEEEeCCeeE
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASK----Q-EIDAFPTLKIFMHGIPT 130 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~----~-~i~~~Ptl~~~~~g~~~ 130 (447)
.+.-++.|+++||++|+++.+.+++.. +.+..+|.+.+++.... . +..++|++ |.+|+.+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~~---------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~i 78 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRKG---------VEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHI 78 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHHT---------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC---------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEE
Confidence 345578899999999999999888742 55677888877665443 3 89999988 4577654
No 287
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.81 E-value=0.00011 Score=62.79 Aligned_cols=82 Identities=18% Similarity=0.189 Sum_probs=58.8
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------------
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------------------------------- 105 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~---------------------------------- 105 (447)
.+..++.|+..||++|+.+.|.+.++.+.+.. .++|.+...+..-
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVK-SGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH-TTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhh-CCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 46789999999999999999999988877622 1235555544310
Q ss_pred --------------------------------chhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHH
Q 013240 106 --------------------------------YSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLK 146 (447)
Q Consensus 106 --------------------------------~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~ 146 (447)
+.++++++||.++|++++ +|+. +.|..+.+.+.+.+.
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~~--~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEYI--FDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTEE--ECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCEE--ccCCCCHHHHHHHhc
Confidence 122456679999999665 7764 468888888887764
No 288
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.79 E-value=0.00016 Score=55.87 Aligned_cols=101 Identities=9% Similarity=0.155 Sum_probs=74.9
Q ss_pred ccccChhhHHhh-hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 255 SVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 255 ~~~l~~~~~~~~-~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
+..++.+++... ...++++++.|+. .....-......+.++++.+++ +.|+.+|+++.+++++.+++ ...|+++
T Consensus 4 v~~l~~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 79 (107)
T 2i4a_A 4 TLAVSDSSFDQDVLKASGLVLVDFWA-EWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQV---RSIPTLM 79 (107)
T ss_dssp EEECCTTTHHHHTTTCSSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTC---CSSSEEE
T ss_pred eeecchhhhhHHHHhCCCEEEEEEEC-CCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCC---CccCEEE
Confidence 556788888754 4566777777765 4566667778888999988874 99999999998999999999 7899999
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
++..++....+.| ..+.+.+.+|++..
T Consensus 80 ~~~~G~~~~~~~G------~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDGKVIDKKVG------ALPKSQLKAWVESA 106 (107)
T ss_dssp EEETTEEEEEEES------CCCHHHHHHHHHHT
T ss_pred EEeCCEEEEEecC------CCCHHHHHHHHHhc
Confidence 9944333333333 34567899998764
No 289
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.79 E-value=0.00014 Score=61.85 Aligned_cols=85 Identities=12% Similarity=0.019 Sum_probs=58.1
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-----------------------hhhhhhCC
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-----------------------SRLASKQE 114 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-----------------------~~l~~~~~ 114 (447)
..++++|.|| +.||+.|....|.+.++.+.+ ..+.+..|+++.. .++ +.|+
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 120 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM----EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYG 120 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC----TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGT
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc----CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhC
Confidence 3579999999 899999999999999988776 2377777776432 234 4555
Q ss_pred Ccc---------ccEEEEEe-CCeeEE-ecC-----CCCHHHHHHHHHHh
Q 013240 115 IDA---------FPTLKIFM-HGIPTE-YYG-----PRKAELLVRYLKKF 148 (447)
Q Consensus 115 i~~---------~Ptl~~~~-~g~~~~-y~g-----~~~~~~i~~fi~~~ 148 (447)
+.. .|+.+++. +|+... +.| ..+.+++.+.++++
T Consensus 121 v~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 121 VLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred CEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 531 58888886 466554 433 34457777776654
No 290
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.78 E-value=0.00021 Score=55.77 Aligned_cols=104 Identities=14% Similarity=0.257 Sum_probs=77.3
Q ss_pred CccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 254 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 254 ~~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
.+..++.+++.. +...++++++.|+. .....-......+.++++++++ +.|+.+|++..+++++.+++ ...|++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 81 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWA-AWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGV---MSIPTL 81 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEEC-CCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCC---CcccEE
Confidence 356778888765 44566778777775 4556667778889999999865 99999999998999999999 689999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
+++..++....+. +..+.+.+.+|++.++.
T Consensus 82 ~~~~~G~~~~~~~------G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTIV------GAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEEE------SCCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEEe------CCCCHHHHHHHHHHHhh
Confidence 8886443333333 33456789999988764
No 291
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.78 E-value=0.0001 Score=59.60 Aligned_cols=108 Identities=13% Similarity=0.115 Sum_probs=80.2
Q ss_pred CCccccChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-----CceEEEEeccchHhHHhhcCCCCCC
Q 013240 253 PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR-----ELVFCYVGIKQFADFADTFEANKKS 326 (447)
Q Consensus 253 p~~~~l~~~~~~~~~-~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~-----~~~f~~vd~~~~~~~~~~~~i~~~~ 326 (447)
..+..++..++.... ..++++++.|+. .....-......+.++++++. ++.|+.+|+...+++++.+++ .
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~ 82 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFYA-PWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGI---R 82 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEEC-TTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTC---C
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEEC-CCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCC---C
Confidence 346678888888743 556677777765 455555666777777877764 499999999998999999999 7
Q ss_pred CCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCcc
Q 013240 327 KLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRT 370 (447)
Q Consensus 327 ~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl 370 (447)
..|++++++.++....+.| ..+.+.+.+|+...+....
T Consensus 83 ~~Pt~~~~~~g~~~~~~~G------~~~~~~l~~~l~~~~~~~~ 120 (133)
T 1x5d_A 83 GFPTIKIFQKGESPVDYDG------GRTRSDIVSRALDLFSDNA 120 (133)
T ss_dssp SSSEEEEEETTEEEEEECS------CCSHHHHHHHHHHHHHHHS
T ss_pred eeCeEEEEeCCCceEEecC------CCCHHHHHHHHHHHhhccC
Confidence 8999999988543333433 4457799999999887643
No 292
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.78 E-value=0.00016 Score=57.28 Aligned_cols=106 Identities=8% Similarity=0.194 Sum_probs=78.2
Q ss_pred CCCccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCc
Q 013240 252 LPLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 329 (447)
Q Consensus 252 ~p~~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P 329 (447)
...+..++..++.. +...++++++.|+. .....-......+.++++++++ +.|+.+|+...+++++.+++ ...|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~~~P 86 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWA-TWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQV---VSIP 86 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCC---CcCC
Confidence 34566788888875 45566788877775 4566667788889999999875 99999999999999999999 7899
Q ss_pred eEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 330 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 330 ~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
++++++.++....+. +..+.+.+.+|++..+.
T Consensus 87 t~~~~~~g~~~~~~~------G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 87 TLILFKDGQPVKRIV------GAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEEETTEEEEEEE------SCCCHHHHHHHTCSCCC
T ss_pred EEEEEECCEEEEEec------CCCCHHHHHHHHHHHHh
Confidence 999987443333333 33456688888876554
No 293
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.78 E-value=0.00029 Score=54.95 Aligned_cols=103 Identities=14% Similarity=0.197 Sum_probs=75.8
Q ss_pred CCccccChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEecc-chHhHHhhcCCCCCCCCc
Q 013240 253 PLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKLP 329 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~-~~~~~~~~~~i~~~~~~P 329 (447)
..+..++.+++..... .++++++.|+. .....-......+.++++.++++.|+.+|+. ..+++++.+++ ...|
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a-~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v---~~~P 80 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFT-QWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVVP 80 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SBSS
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEEC-CcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCC---Ceee
Confidence 3456778888877654 46777777775 4556667778889999999989999999998 67899999999 6799
Q ss_pred eEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 330 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 330 ~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+++++..++....+.|. ..+.+.+|++.++
T Consensus 81 t~~~~~~G~~~~~~~G~-------~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 81 TFKILKENSVVGEVTGA-------KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEEESSSSEEEEEESS-------CHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCC-------CHHHHHHHHHHhh
Confidence 97776444332233331 2568999998775
No 294
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.77 E-value=6.1e-05 Score=58.36 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=49.1
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-----hhhh----hhCCCccccEEEEEeCCeeEE
Q 013240 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-----SRLA----SKQEIDAFPTLKIFMHGIPTE 131 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-----~~l~----~~~~i~~~Ptl~~~~~g~~~~ 131 (447)
+.-++.|+++||++|+++.+.+++.. +.+-.+|.+.. .++. +.+++.++|++++ +|. .
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~---------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~--~ 87 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG---------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE--K 87 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT---------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT--E
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC---------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC--E
Confidence 44577899999999999999888742 33455666531 2332 3479999999876 331 3
Q ss_pred ecCCCCHHHHHHHH
Q 013240 132 YYGPRKAELLVRYL 145 (447)
Q Consensus 132 y~g~~~~~~i~~fi 145 (447)
+-|..+.+.|.+++
T Consensus 88 ~igg~~~~~l~~~L 101 (103)
T 3nzn_A 88 AIVGFKEKEIRESL 101 (103)
T ss_dssp EEESCCHHHHHHHT
T ss_pred EEEcCCHHHHHHHh
Confidence 44667777777665
No 295
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.76 E-value=0.00016 Score=58.99 Aligned_cols=108 Identities=10% Similarity=0.115 Sum_probs=80.0
Q ss_pred CccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC----CceEEEEeccchHhHHhhcCCCCCCCCc
Q 013240 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----ELVFCYVGIKQFADFADTFEANKKSKLP 329 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~----~~~f~~vd~~~~~~~~~~~~i~~~~~~P 329 (447)
.+..++.++|+.....++++++.|+. .....-..+...+.++++.+. ++.|+.+|+.+..++++.+++ ...|
T Consensus 18 ~v~~l~~~~~~~~~~~~~~vlv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~P 93 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADKDTVLLEFYA-PWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDV---SGYP 93 (140)
T ss_dssp TEEECCTTTHHHHHTTCSEEEEEECC-TTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTC---CSSS
T ss_pred CCEEcChHhHHHHHhcCCeEEEEEEC-CCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCC---CccC
Confidence 35677888888877777777777764 355555666667777777654 389999999998999999999 6899
Q ss_pred eEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 330 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 330 ~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
+++++..++ ...+. +..+.+.|.+|++..+.....+
T Consensus 94 t~~~~~~G~-~~~~~------g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 94 TIKILKKGQ-AVDYD------GSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEEETTE-EEECC------SCCCHHHHHHHHHHHHSSSCCC
T ss_pred eEEEEECCc-EEEcC------CCCCHHHHHHHHHHhcCCCCCC
Confidence 999995443 33333 3456789999999998776554
No 296
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.76 E-value=0.00052 Score=53.05 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=72.7
Q ss_pred cChhhHHhhh--cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEe
Q 013240 258 INQDTLNLLK--DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (447)
Q Consensus 258 l~~~~~~~~~--~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~ 335 (447)
.+.++++... ..++++++.|+. .....-......+.+++++++++.|+.+|+++.+++++.+++ ...|+++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~v~v~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~ 82 (107)
T 1gh2_A 7 GSDPDFQPELSGAGSRLAVVKFTM-RGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNI---SATPTFQFFR 82 (107)
T ss_dssp CSGGGHHHHHHHTTTSCEEEEEEC-SSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSSEEEEEE
T ss_pred cCHHHHHHHHHhCCCCEEEEEEEC-CCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCC---CcccEEEEEE
Confidence 3567777765 456778777775 356666778888999999998899999999998999999999 7899999986
Q ss_pred CCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 336 GNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 336 ~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
.++....+.| ...+.+.+|++..+
T Consensus 83 ~G~~~~~~~G-------~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 83 NKVRIDQYQG-------ADAVGLEEKIKQHL 106 (107)
T ss_dssp TTEEEEEEES-------SCHHHHHHHHHHHH
T ss_pred CCeEEEEEeC-------CCHHHHHHHHHHhc
Confidence 5443333333 12345888888764
No 297
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.76 E-value=0.00035 Score=61.62 Aligned_cols=110 Identities=7% Similarity=0.065 Sum_probs=85.6
Q ss_pred CCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
+.+..++..++......++++++.|+. .....-......+.++++.+++ +.|+.||+...+++++.+++ ...|++
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a-~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 172 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYS-PGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGV---NSYPSL 172 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEEC-TTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeC-CCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCC---CcCCeE
Confidence 346678889998877777888888875 3566667788889999999876 99999999999999999999 789999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
+++..++....+. +..+.+.+.+|+...+...+..
T Consensus 173 ~~~~~G~~~~~~~------G~~~~~~l~~~i~~~l~~~~~~ 207 (210)
T 3apq_A 173 FIFRSGMAAVKYN------GDRSKESLVAFAMQHVRSTVTE 207 (210)
T ss_dssp EEECTTSCCEECC------SCCCHHHHHHHHHHHHHCCSSC
T ss_pred EEEECCCceeEec------CCCCHHHHHHHHHHhCccccee
Confidence 9994443333333 3456789999999988766543
No 298
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.75 E-value=0.00012 Score=54.58 Aligned_cols=74 Identities=11% Similarity=0.028 Sum_probs=51.4
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc----hhhhhhCCC-----ccccEEEEEeCCeeEEec
Q 013240 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----SRLASKQEI-----DAFPTLKIFMHGIPTEYY 133 (447)
Q Consensus 63 ~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~----~~l~~~~~i-----~~~Ptl~~~~~g~~~~y~ 133 (447)
.++.|+++||++|+++.+.+.+.. -++.+..||...+ .++.+.+|. .++|++++ +|+.+.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~-------i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i~-- 73 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN-------IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHIG-- 73 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT-------CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEEE--
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC-------CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEEe--
Confidence 477889999999999988776532 2244555565544 457788888 99999954 776543
Q ss_pred CCCCHHHHHHHHHHhcC
Q 013240 134 GPRKAELLVRYLKKFVA 150 (447)
Q Consensus 134 g~~~~~~i~~fi~~~~~ 150 (447)
..+++.+++++.+.
T Consensus 74 ---g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 74 ---GFTELKANADKILN 87 (89)
T ss_dssp ---SHHHHHHTHHHHTT
T ss_pred ---ChHHHHHHHHHHhc
Confidence 45677777766543
No 299
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.74 E-value=0.0005 Score=53.32 Aligned_cols=96 Identities=11% Similarity=0.231 Sum_probs=71.5
Q ss_pred ChhhHHhhh-cC-CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeC
Q 013240 259 NQDTLNLLK-DD-KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 336 (447)
Q Consensus 259 ~~~~~~~~~-~~-~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~ 336 (447)
+.++|+... .. ++++++.|+. .....-......+.++++.++++.|+.||+++.+++++.+++ ...|+++++..
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a-~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V---~~~PT~~~~~~ 82 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYA-TWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQI---ACMPTFLFMKN 82 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTC---CBSSEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEEC-CCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCC---CeecEEEEEEC
Confidence 456676644 22 4566666665 456666778889999999999999999999999999999999 78999999976
Q ss_pred CccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 337 NENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 337 ~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
++....+.| .+.+.|.+||+..
T Consensus 83 G~~v~~~~G-------~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 83 GQKLDSLSG-------ANYDKLLELVEKN 104 (105)
T ss_dssp TEEEEEEES-------CCHHHHHHHHHHH
T ss_pred CEEEEEEeC-------cCHHHHHHHHHhc
Confidence 543333443 2467899998753
No 300
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.74 E-value=0.00025 Score=55.30 Aligned_cols=98 Identities=10% Similarity=0.183 Sum_probs=72.3
Q ss_pred ChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEE
Q 013240 259 NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (447)
Q Consensus 259 ~~~~~~~~~~----~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~ 334 (447)
+.+++..... .++++++.|+. .....-......+.++++.++++.|+.+|+++.+++++.+++ ...|+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~ 86 (113)
T 1ti3_A 11 TVDTWKEHFEKGKGSQKLIVVDFTA-SWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNV---EAMPTFIFL 86 (113)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEEC-SSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHC---SSTTEEEEE
T ss_pred cHHHHHHHHHHhhhcCCeEEEEEEC-CCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCC---CcccEEEEE
Confidence 5566665443 35677777765 455666777888999999998899999999998999999998 689999998
Q ss_pred eCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 335 DGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 335 ~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
..++....+.| .+.+.+.++++++++
T Consensus 87 ~~G~~~~~~~g-------~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 87 KDGKLVDKTVG-------ADKDGLPTLVAKHAT 112 (113)
T ss_dssp ETTEEEEEEEC-------CCTTHHHHHHHHHHH
T ss_pred eCCEEEEEEec-------CCHHHHHHHHHHhhc
Confidence 64433333333 235689999988764
No 301
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.73 E-value=0.00027 Score=54.37 Aligned_cols=98 Identities=12% Similarity=0.193 Sum_probs=71.4
Q ss_pred ccCh-hhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 257 PINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 257 ~l~~-~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
+++. +.+..... .++++++.|+. .....-......+.++++.++ ++.|+.+|+++.+++++.+++ ...|+++
T Consensus 4 ~l~~~~~~~~~l~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 79 (106)
T 1xwb_A 4 QVKDKADLDGQLTKASGKLVVLDFFA-TWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNI---SSMPTFV 79 (106)
T ss_dssp ECCSHHHHHHHHHHHTTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred ecCCHHHHHHHHHhcCCCEEEEEEEC-CcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCC---CcccEEE
Confidence 4444 67766554 56777777775 455666777888999999984 599999999999999999999 6799998
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
++..++....+.| .+.+.+.+|++.+
T Consensus 80 ~~~~G~~~~~~~g-------~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 80 FLKNGVKVEEFAG-------ANAKRLEDVIKAN 105 (106)
T ss_dssp EEETTEEEEEEES-------CCHHHHHHHHHHT
T ss_pred EEcCCcEEEEEcC-------CCHHHHHHHHHHh
Confidence 8865433333332 2456788888764
No 302
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.73 E-value=0.00012 Score=62.18 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=35.5
Q ss_pred cCCeEEEEEE-CCCChhhhh-hhHHHHHHHHHhhcCCCCe-EEEEEeCc
Q 013240 59 SFDYILVDFY-APWCGHCKR-LAPQLDEAAPILAKLKEPI-VIAKVDAD 104 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~-~~p~~~~~a~~l~~~~~~v-~~~~Vd~~ 104 (447)
..++++|.|| +.||+.|.. ..|.+.+++++++..+ + .+..|+.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d 76 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG--VDIIACMAVN 76 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT--CCEEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 3467888887 999999999 9999999998887644 6 66777654
No 303
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.72 E-value=0.00016 Score=61.20 Aligned_cols=99 Identities=10% Similarity=0.065 Sum_probs=64.3
Q ss_pred ccccCCCCeEEeChhhHHHhHccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------
Q 013240 37 TKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------- 105 (447)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~---------- 105 (447)
.....++..+.|.+ | ..++++|.|| +.||++|....|.+.++.+. . .+.+..|+++.
T Consensus 30 ~l~~~~G~~~~l~~--~-----~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~----~~~vv~is~d~~~~~~~~~~~ 97 (166)
T 3p7x_A 30 TVLDNDLNQVTLAD--Y-----AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E----EGIVLTISADLPFAQKRWCAS 97 (166)
T ss_dssp EEECTTSCEEEGGG--G-----TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T----TSEEEEEESSCHHHHHHHHHH
T ss_pred EEEcCCCCEEeHHH--h-----CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C----CCEEEEEECCCHHHHHHHHHH
Confidence 33444455555432 1 3578999998 78999999999999998765 2 26677777642
Q ss_pred -------------chhhhhhCCCcc------ccEEEEEe-CCeeEE-ec-----CCCCHHHHHHHHHH
Q 013240 106 -------------YSRLASKQEIDA------FPTLKIFM-HGIPTE-YY-----GPRKAELLVRYLKK 147 (447)
Q Consensus 106 -------------~~~l~~~~~i~~------~Ptl~~~~-~g~~~~-y~-----g~~~~~~i~~fi~~ 147 (447)
+.++++.|++.. .|+.+++. +|+... +. +..+.+.+.+.+++
T Consensus 98 ~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 98 AGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp HTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 234556667764 79988885 476553 22 23455667666653
No 304
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.72 E-value=0.0003 Score=54.83 Aligned_cols=98 Identities=9% Similarity=0.193 Sum_probs=73.3
Q ss_pred ChhhHHhhhcC----CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 259 NQDTLNLLKDD----KRKIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 259 ~~~~~~~~~~~----~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
+.++++..... ++++++.|+. .....-......+.+++..++ ++.|+.+|++..+++++.+++ ...|++++
T Consensus 9 ~~~~~~~~l~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~ 84 (112)
T 1ep7_A 9 SKAAWDAQLAKGKEEHKPIVVDFTA-TWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGI---TAMPTFHV 84 (112)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTC---CBSSEEEE
T ss_pred CHHHHHHHHHhhcccCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCC---CcccEEEE
Confidence 45677665543 6788887775 455666777888999999998 599999999999999999999 67999988
Q ss_pred EeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 334 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 334 ~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
+..++....+.| . +.+.+.+|++.++.
T Consensus 85 ~~~G~~~~~~~G------~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 85 YKDGVKADDLVG------A-SQDKLKALVAKHAA 111 (112)
T ss_dssp EETTEEEEEEES------C-CHHHHHHHHHHHHC
T ss_pred EECCeEEEEEcC------C-CHHHHHHHHHHHhc
Confidence 864433333333 2 46789999988764
No 305
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.71 E-value=0.00025 Score=57.49 Aligned_cols=109 Identities=14% Similarity=0.085 Sum_probs=78.4
Q ss_pred HHHhhCCCCccccChhhHHhhhcCCC-cEEEEEEeCCCh--hhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcC
Q 013240 246 FIKQNFLPLSVPINQDTLNLLKDDKR-KIVLAIVEDETE--EKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFE 321 (447)
Q Consensus 246 fI~~~~~p~~~~l~~~~~~~~~~~~~-~~vl~~~~~~~~--~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~ 321 (447)
-..++.+| .++.++|+....... ++++.|..+ .. ..-.....+|.++|.++.+ +.|+.||.++.++++..||
T Consensus 11 l~~~~g~~---~vt~~~F~~~v~~~~~~vlVdF~A~-wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~yg 86 (137)
T 2qsi_A 11 AARPNAPT---LVDEATVDDFIAHSGKIVVLFFRGD-AVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFG 86 (137)
T ss_dssp ------CE---EECTTTHHHHHHTSSSEEEEEECCC-TTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHT
T ss_pred HHHhcCCc---ccCHhHHHHHHhcCCCcEEEEEeCC-ccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcC
Confidence 33444444 677888887554444 777777653 33 4456778899999999975 9999999999999999999
Q ss_pred CCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 322 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
+ ...|++++++..+.-....| ....+.+.++|+.++.
T Consensus 87 V---~siPTlilFkdG~~v~~~vG------~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 87 V---AVCPSLAVVQPERTLGVIAK------IQDWSSYLAQIGAMLA 123 (137)
T ss_dssp C---CSSSEEEEEECCEEEEEEES------CCCHHHHHHHHHHHHH
T ss_pred C---ccCCEEEEEECCEEEEEEeC------CCCHHHHHHHHHHHhc
Confidence 9 78999999987654444433 3346689999988873
No 306
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.70 E-value=0.00012 Score=57.43 Aligned_cols=103 Identities=9% Similarity=0.102 Sum_probs=74.8
Q ss_pred ccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 255 ~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
+..++.++++... .++++++.|+.+ ....-......+.++++++++ +.|+.+|++..+++++.+++ ...|++++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~-wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~ 77 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAP-WCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGV---MSIPTLLV 77 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECT-TBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTC---CSBSEEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECC-CCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---CcccEEEE
Confidence 4567888888766 667777777753 444445666778888888764 99999999988999999999 78999999
Q ss_pred EeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 334 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 334 ~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
+..++....+. +..+.+.+.+|+...+..
T Consensus 78 ~~~G~~~~~~~------G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 78 LKDGEVVETSV------GFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EETTEEEEEEE------SCCCHHHHHHHHHTTSCS
T ss_pred EeCCEEEEEEe------CCCCHHHHHHHHHHHHHh
Confidence 94333333333 334567899998766544
No 307
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.70 E-value=4.7e-05 Score=57.52 Aligned_cols=56 Identities=18% Similarity=0.430 Sum_probs=42.6
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCCccccEEEEEeCCeeE
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPTLKIFMHGIPT 130 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~~i~~~Ptl~~~~~g~~~ 130 (447)
++.|+++||++|+++.+.+++. + +.+..+|++.++. +.+.+++.++|++ |.+|+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~-----~----i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i 67 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK-----G----AEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHV 67 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T----CCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc-----C----CCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 7789999999999998887753 2 5577788877654 4557899999975 4577644
No 308
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.70 E-value=0.00021 Score=57.58 Aligned_cols=102 Identities=15% Similarity=0.229 Sum_probs=75.9
Q ss_pred ccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 255 ~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
+..++.++|.. +...++++++.|+. .....-......+.++++.+++ +.|+.+|+++.+++++.+++ ...|+++
T Consensus 24 v~~l~~~~f~~~~~~~~k~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 99 (128)
T 2o8v_B 24 IIHLTDDSFDTDVLKADGAILVDFWA-EWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTLL 99 (128)
T ss_dssp SEEECTTTHHHHTTTCSSEEEEEEEC-SSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTC---CSSSEEE
T ss_pred cEecChhhHHHHHHhcCCEEEEEEEC-CCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CccCEEE
Confidence 56678888874 44556777777765 4566667778889999999875 99999999988999999999 7899999
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
++..++....+. +..+.+.+.+|++.++
T Consensus 100 ~~~~G~~~~~~~------G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFKNGEVAATKV------GALSKGQLKEFLDANL 127 (128)
T ss_dssp EEETTEEEEEEE------SCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEc------CCCCHHHHHHHHHHhh
Confidence 994333222333 3345678999998775
No 309
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.68 E-value=0.00021 Score=55.79 Aligned_cols=102 Identities=4% Similarity=0.034 Sum_probs=73.1
Q ss_pred cccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEe
Q 013240 256 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (447)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~ 335 (447)
..++.++| .....+++.++.|+. .....-......+.+++..++++.|+.+|+.+.+++++.+++ ...|+++++.
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a-~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~ 80 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHK-NLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGF---ERVPTLVFIR 80 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEEC-SSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTC---CSSCEEEEEE
T ss_pred ecCCHHHH-HHHHcCCCEEEEEEC-CCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCC---cccCEEEEEE
Confidence 45667777 444455777776765 355556677788999999988899999999988999999999 7899999985
Q ss_pred CCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 336 GNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 336 ~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
.++....+. +..+.+.+.+++..+.++
T Consensus 81 ~G~~v~~~~------G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 81 DGKVAKVFS------GIMNPRELQALYASIHHH 107 (110)
T ss_dssp SSSEEEEEE------SCCCHHHHHHHHHTC---
T ss_pred CCEEEEEEc------CCCCHHHHHHHHHHHhhh
Confidence 443333333 334567899999877655
No 310
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.68 E-value=0.00029 Score=62.73 Aligned_cols=110 Identities=15% Similarity=0.221 Sum_probs=87.0
Q ss_pred CCccccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 253 PLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 253 p~~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
+.+..+|.++|.. +...++++++.|+. .....-......+.++++.+++ +.|+.||+...+.+++.+++ ...|+
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a-~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt 87 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWA-EWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPT 87 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTC---CSBSE
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEEC-CcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCC---CcCCE
Confidence 4566889999977 56677888888875 4566667888899999999987 99999999999999999999 78999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
+++++.++....+. +..+.+.+.+|++..+.+...+
T Consensus 88 ~~~~~~G~~~~~~~------G~~~~~~l~~~l~~~l~~~~~~ 123 (222)
T 3dxb_A 88 LLLFKNGEVAATKV------GALSKGQLKEFLDANLAGSAME 123 (222)
T ss_dssp EEEEETTEEEEEEE------SCCCHHHHHHHHHHHSCCSCCB
T ss_pred EEEEECCeEEEEec------cccChHHHHHHHHhhccccccc
Confidence 99997543333333 3456789999999999887555
No 311
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.66 E-value=0.00016 Score=65.83 Aligned_cols=88 Identities=14% Similarity=0.225 Sum_probs=64.8
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc----------------------------hhh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----------------------------SRL 109 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~----------------------------~~l 109 (447)
..++++|.|| +.||+.|....|.+.+++++++..+ +.+..|+++.. .++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~g--v~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~v 167 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 167 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHH
Confidence 3578999999 9999999999999999999997643 77888887532 245
Q ss_pred hhhCCCc------cccEEEEEeC-CeeEE-ecC----CCCHHHHHHHHHHh
Q 013240 110 ASKQEID------AFPTLKIFMH-GIPTE-YYG----PRKAELLVRYLKKF 148 (447)
Q Consensus 110 ~~~~~i~------~~Ptl~~~~~-g~~~~-y~g----~~~~~~i~~fi~~~ 148 (447)
++.|++. .+|+.+++.. |+... +.+ .++.+++.+.++.+
T Consensus 168 a~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 6667775 4799988864 65543 333 45677777776543
No 312
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.66 E-value=0.00046 Score=54.97 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=76.5
Q ss_pred CCCccccChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEecc-chHhHHhhcCCCCCCCC
Q 013240 252 LPLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKL 328 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~-~~~~~~~~~~i~~~~~~ 328 (447)
...+..++.+++..... .++++++.|+. .....-......+.+++++++++.|+.+|+. +.+++++.+++ ...
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a-~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v---~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFT-QWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEEC-CcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCC---Cee
Confidence 34566778888876543 56777777774 4566667778889999999989999999997 67899999999 789
Q ss_pred ceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 329 PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 329 P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
|+++++..++....+.|. ..+.+.++++.++
T Consensus 93 Pt~~~~~~G~~~~~~~G~-------~~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGA-------KYDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEEEEEEESS-------CHHHHHHHHHHHT
T ss_pred eEEEEEeCCcEEEEEcCC-------CHHHHHHHHHHhh
Confidence 998887654333233331 2568999988765
No 313
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00042 Score=54.02 Aligned_cols=101 Identities=18% Similarity=0.322 Sum_probs=71.4
Q ss_pred cccCh-hhHHhhhcC---CCcEEEEEEeCCChhhHHHHHHHHHHHHHh--CCCceEEEEeccchHhHHhhcCCCCCCCCc
Q 013240 256 VPINQ-DTLNLLKDD---KRKIVLAIVEDETEEKSQKLVTTLKAAASA--NRELVFCYVGIKQFADFADTFEANKKSKLP 329 (447)
Q Consensus 256 ~~l~~-~~~~~~~~~---~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~--~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P 329 (447)
..++. ++++..... ++++++.|+.+ ....-......+.+++++ ++++.|+.+|++..+++++.+++ ...|
T Consensus 3 ~~i~~~~~~~~~~~~~~~~~~~~v~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~P 78 (112)
T 3d6i_A 3 IEINDQEQFTYLTTTAAGDKLIVLYFHTS-WAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEI---SAVP 78 (112)
T ss_dssp EEECCHHHHHHHHTTTTTTCCEEEEEECC-C--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred cccCCHHHHHHHHhcccCCCEEEEEEECC-CCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCC---Cccc
Confidence 34554 777776654 67787777753 555556777888889988 55699999999999999999999 7899
Q ss_pred eEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 330 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 330 ~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
+++++..++....+.|. ..+.+.++++.++.
T Consensus 79 t~~~~~~G~~~~~~~G~-------~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 79 YFIIIHKGTILKELSGA-------DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEEEETTEEEEEECSC-------CHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCC-------CHHHHHHHHHHHHh
Confidence 99998644333333331 23458888887764
No 314
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.66 E-value=0.00061 Score=56.70 Aligned_cols=107 Identities=8% Similarity=0.162 Sum_probs=79.5
Q ss_pred CccccC-hhhHHhhhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 254 LSVPIN-QDTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 254 ~~~~l~-~~~~~~~~~~--~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
.+..++ .+.+..+... ++++++.|+. .....-......+.++++.++++.|+.||+.+.+++++.+++ ...|+
T Consensus 13 ~v~~l~~~~~~~~~~~~~~~~~vvv~F~a-~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 88 (153)
T 2wz9_A 13 AVEEVGSAGQFEELLRLKAKSLLVVHFWA-PWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEI---SSVPT 88 (153)
T ss_dssp CSEEECSHHHHHHHHHHTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSSE
T ss_pred CeEEcCCHHHHHHHHHhcCCCeEEEEEEC-CCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCC---CCCCE
Confidence 344444 5777776555 6778877775 356666778888999999998899999999999999999999 78999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
+++++.++....+.| .+.+.+.+|++.++.....
T Consensus 89 ~~~~~~G~~~~~~~G-------~~~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 89 FLFFKNSQKIDRLDG-------AHAPELTKKVQRHASSGSF 122 (153)
T ss_dssp EEEEETTEEEEEEES-------SCHHHHHHHHHHHSCTTSS
T ss_pred EEEEECCEEEEEEeC-------CCHHHHHHHHHHHhccccC
Confidence 999984333222333 2356799999999876543
No 315
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.65 E-value=0.00011 Score=55.51 Aligned_cols=75 Identities=25% Similarity=0.395 Sum_probs=53.5
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhh-----CCCccccEEEEEeCCeeEEecCCCC
Q 013240 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASK-----QEIDAFPTLKIFMHGIPTEYYGPRK 137 (447)
Q Consensus 63 ~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~-----~~i~~~Ptl~~~~~g~~~~y~g~~~ 137 (447)
.++.|.++||++|++....+++ ++ |.+-.+|.+.+++..+. .|.+++|++++ .+|.... .-+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~-----~g----i~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~l~---~~~ 71 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA-----NR----IAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGSTLT---NPS 71 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH-----TT----CCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCEEE---SCC
T ss_pred cEEEEcCCCCHhHHHHHHHHHh-----cC----CceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEEEe---CCC
Confidence 3778899999999998777665 22 77888999888765443 27889999764 5564432 236
Q ss_pred HHHHHHHHHHhcC
Q 013240 138 AELLVRYLKKFVA 150 (447)
Q Consensus 138 ~~~i~~fi~~~~~ 150 (447)
.++|.+++.+..+
T Consensus 72 ~~el~~~L~el~g 84 (92)
T 2lqo_A 72 ADEVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 7778888777653
No 316
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.64 E-value=6.2e-05 Score=59.54 Aligned_cols=68 Identities=13% Similarity=0.259 Sum_probs=48.2
Q ss_pred hhhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-------hhhhhhCCCccccEEE
Q 013240 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-------SRLASKQEIDAFPTLK 122 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-------~~l~~~~~i~~~Ptl~ 122 (447)
.+.++++++.++ ++.|+++||++|++..+.+.+. + +.+..+|.+.. ..+.+..|..++|+++
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~-----~----i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vf 75 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL-----G----VECNVLELDQVDDGARVQEVLSEITNQKTVPNIF 75 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT-----T----CCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc-----C----CCcEEEEecCCCChHHHHHHHHHHhCCCccCEEE
Confidence 356777886655 4449999999999998888763 2 44566777642 2355677899999986
Q ss_pred EEeCCeeE
Q 013240 123 IFMHGIPT 130 (447)
Q Consensus 123 ~~~~g~~~ 130 (447)
+ +|+.+
T Consensus 76 i--~g~~i 81 (114)
T 3h8q_A 76 V--NKVHV 81 (114)
T ss_dssp E--TTEEE
T ss_pred E--CCEEE
Confidence 5 77654
No 317
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.64 E-value=0.00016 Score=62.34 Aligned_cols=77 Identities=10% Similarity=0.095 Sum_probs=52.3
Q ss_pred HHHhHccCCeEEEEEECCCChhhhh-hhHHHHHHHHHhhcCCCCeE-EEEEeCcc-----------------------ch
Q 013240 53 FDSAISSFDYILVDFYAPWCGHCKR-LAPQLDEAAPILAKLKEPIV-IAKVDADK-----------------------YS 107 (447)
Q Consensus 53 f~~~~~~~~~~lV~f~~~~C~~C~~-~~p~~~~~a~~l~~~~~~v~-~~~Vd~~~-----------------------~~ 107 (447)
+.+++.....+|+.|++.||+.|.. ..|.+.+++++++..+ +. +..|+.+. +.
T Consensus 50 L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~ 127 (184)
T 3uma_A 50 TELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG--VDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNA 127 (184)
T ss_dssp HHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTC
T ss_pred HHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCch
Confidence 3443444334455556999999999 6999999999987654 55 66677643 23
Q ss_pred hhhhhCCCcc-----------ccEEEEEeCCeeEE
Q 013240 108 RLASKQEIDA-----------FPTLKIFMHGIPTE 131 (447)
Q Consensus 108 ~l~~~~~i~~-----------~Ptl~~~~~g~~~~ 131 (447)
++++.||+.. .|+.+++.+|+...
T Consensus 128 ~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~ 162 (184)
T 3uma_A 128 AFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKA 162 (184)
T ss_dssp HHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEE
T ss_pred HHHHHcCCceeccccCCcccceeEEEEECCCEEEE
Confidence 4677787752 46677778887654
No 318
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.63 E-value=0.00024 Score=56.60 Aligned_cols=97 Identities=11% Similarity=0.206 Sum_probs=73.7
Q ss_pred ChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccchHhHHhhcCCCCCCCCceEEEEeC
Q 013240 259 NQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 336 (447)
Q Consensus 259 ~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~ 336 (447)
+.++|+.....++++++.|+.+ ....-......+.++++.+++ +.|+.+|++..+++++.+++ ...|++++++.
T Consensus 22 ~~~~f~~~l~~~k~vvv~f~a~-~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v---~~~Pt~~~~~~ 97 (121)
T 2j23_A 22 SYDQFKQVTGGDKVVVIDFWAT-WCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGI---RAMPTFVFFKN 97 (121)
T ss_dssp SHHHHHHHHSSSSCEEEEEECT-TCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTC---CSSSEEEEEET
T ss_pred CHHHHHHHHcCCCEEEEEEECC-CCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCC---CcccEEEEEEC
Confidence 4577887777777888877753 445556777788888888876 99999999998999999999 78999999875
Q ss_pred CccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 337 NENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 337 ~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
++....+.| . +.+.+.+|++.++
T Consensus 98 G~~~~~~~G------~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 98 GQKIDTVVG------A-DPSKLQAAITQHS 120 (121)
T ss_dssp TEEEEEEES------S-CHHHHHHHHHHHT
T ss_pred CeEEeeEcC------C-CHHHHHHHHHHhh
Confidence 433333333 2 4678999998765
No 319
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.63 E-value=0.00055 Score=58.32 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=85.9
Q ss_pred HHHHHHhhCCCCccccChhhHHhhhcC--CCcEEEEEEeC------CChhhHHHHHHHHHHHHHhCC-----C-ceEEEE
Q 013240 243 LEEFIKQNFLPLSVPINQDTLNLLKDD--KRKIVLAIVED------ETEEKSQKLVTTLKAAASANR-----E-LVFCYV 308 (447)
Q Consensus 243 i~~fI~~~~~p~~~~l~~~~~~~~~~~--~~~~vl~~~~~------~~~~~~~~~~~~l~~~a~~~~-----~-~~f~~v 308 (447)
+.+++....-..+.++|..+|+.+... +.++++.|... .....-+.+..++..+|+.+. + +.|+.|
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 345555555566889999999987643 34567766651 245556788889999998764 4 999999
Q ss_pred eccchHhHHhhcCCCCCCCCceEEEEeCCccc-----eecCC---CCCCC-c-ccchhHHHHHHHHHhc
Q 013240 309 GIKQFADFADTFEANKKSKLPKMVVWDGNENY-----LTVIG---SESID-E-EDQGSQISRFLEGYRE 367 (447)
Q Consensus 309 d~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y-----~~~~g---~~~~~-~-~~~~~~i~~Fl~~~~~ 367 (447)
|.++.++++..||| ...|+++++..++.- .+... .+.+. + ..+.+.+.+||.+-..
T Consensus 88 D~d~~~~la~~~~I---~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 88 DVNEVPQLVKDLKL---QNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILN 153 (178)
T ss_dssp ETTTCHHHHHHTTC---CSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHT
T ss_pred ECccCHHHHHHcCC---CCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcC
Confidence 99999999999999 889999999985311 11110 01111 2 4567889999988665
No 320
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.63 E-value=0.00049 Score=54.23 Aligned_cols=99 Identities=13% Similarity=0.309 Sum_probs=73.1
Q ss_pred ccccCh-hhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceE
Q 013240 255 SVPINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 331 (447)
Q Consensus 255 ~~~l~~-~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~v 331 (447)
+..++. +++..... .++++++.|+. .....-......+.++++++ ++.|+.+|+++.+++++.+++ ...|++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a-~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v---~~~Pt~ 89 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFA-TWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNI---SAMPTF 89 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTC---CSSSEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEEC-CCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCC---CccceE
Confidence 445555 77766554 56777777775 45566677788899999988 899999999999999999999 789999
Q ss_pred EEEeCCccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 332 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 332 vi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
+++..++....+.| .+.+.+.+|++.+
T Consensus 90 ~~~~~G~~~~~~~G-------~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 90 IAIKNGEKVGDVVG-------ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEETTEEEEEEES-------SCHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEeC-------CCHHHHHHHHHHh
Confidence 88864433333333 2356888988765
No 321
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.62 E-value=0.00076 Score=53.86 Aligned_cols=104 Identities=14% Similarity=0.159 Sum_probs=75.0
Q ss_pred cccChhhHH-----hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CceEEEEe--ccchHhHHhhcCCCCCCC
Q 013240 256 VPINQDTLN-----LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVG--IKQFADFADTFEANKKSK 327 (447)
Q Consensus 256 ~~l~~~~~~-----~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd--~~~~~~~~~~~~i~~~~~ 327 (447)
..++..+++ .....++++++.|+. .....-......+.++++++. ++.|+.+| .+...++++.+++ ..
T Consensus 7 ~~l~~~~~~~~~~~~~~~~~k~~lv~f~a-~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v---~~ 82 (126)
T 2l57_A 7 KQINFQSINVVENLEEAKEGIPTIIMFKT-DTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDA---NI 82 (126)
T ss_dssp SCTTTTCCSEESSTTTCCSSSCEEEEEEC-SSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTC---CS
T ss_pred CCCCccccchhHHHHHHhCCCcEEEEEEC-CCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCC---cc
Confidence 344444444 344456777777765 456666777888899999985 59999999 8888999999999 78
Q ss_pred CceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 328 LPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 328 ~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
.|++++++.+++. ..+. +..+.+.+.+|++..+...
T Consensus 83 ~Pt~~~~~~~G~~~~~~~------G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 83 VPTTVFLDKEGNKFYVHQ------GLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp SSEEEEECTTCCEEEEEE------SCCCHHHHHHHHHHHCCCC
T ss_pred eeEEEEECCCCCEEEEec------CCCCHHHHHHHHHHHhccc
Confidence 9999999965432 2233 3345678999998886654
No 322
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.60 E-value=0.00033 Score=55.15 Aligned_cols=95 Identities=15% Similarity=0.224 Sum_probs=70.6
Q ss_pred ChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCc
Q 013240 259 NQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE 338 (447)
Q Consensus 259 ~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~ 338 (447)
+.+.++.+...++++++.|+. .....-......|.+++++++++.|+.+|+++.+++++.+++ ...|+++++..++
T Consensus 19 ~~~~~~~~~~~~k~vvv~F~a-~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~ 94 (114)
T 2oe3_A 19 NLTEFRNLIKQNDKLVIDFYA-TWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEV---TAMPTFVLGKDGQ 94 (114)
T ss_dssp SHHHHHHHHHHCSEEEEEEEC-TTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSBSEEEEEETTE
T ss_pred CHHHHHHHHhCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCC---CcccEEEEEeCCe
Confidence 456677776677788877775 455666777788999999998899999999998999999999 7899998885443
Q ss_pred cceecCCCCCCCcccchhHHHHHHHH
Q 013240 339 NYLTVIGSESIDEEDQGSQISRFLEG 364 (447)
Q Consensus 339 ~y~~~~g~~~~~~~~~~~~i~~Fl~~ 364 (447)
....+.| .. .+.+.+|+++
T Consensus 95 ~~~~~~G------~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 95 LIGKIIG------AN-PTALEKGIKD 113 (114)
T ss_dssp EEEEEES------SC-HHHHHHHHHT
T ss_pred EEEEEeC------CC-HHHHHHHHHh
Confidence 3323333 22 5678888764
No 323
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.59 E-value=0.00058 Score=53.65 Aligned_cols=99 Identities=10% Similarity=0.224 Sum_probs=73.9
Q ss_pred ChhhHHhhhcC----CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEE
Q 013240 259 NQDTLNLLKDD----KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (447)
Q Consensus 259 ~~~~~~~~~~~----~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~ 334 (447)
+.+.++..... ++++++.|+. .....-......+.++++.++++.|+.+|++..+++++.+++ ...|+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~ 88 (118)
T 2vm1_A 13 TKQEFDTHMANGKDTGKLVIIDFTA-SWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNV---EAMPTFLFI 88 (118)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSBSEEEEE
T ss_pred CHHHHHHHHHhcccCCCEEEEEEEC-CCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCC---CcCcEEEEE
Confidence 56677664433 6778877775 456666777888999999998899999999998999999999 789999988
Q ss_pred eCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 335 DGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 335 ~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
..++....+.| .+.+.+.+++..++..
T Consensus 89 ~~g~~~~~~~g-------~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 89 KDGEKVDSVVG-------GRKDDIHTKIVALMGS 115 (118)
T ss_dssp ETTEEEEEEES-------CCHHHHHHHHHHHHC-
T ss_pred eCCeEEEEecC-------CCHHHHHHHHHHHhcc
Confidence 65433333333 2467899999888754
No 324
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.58 E-value=0.00019 Score=61.57 Aligned_cols=86 Identities=9% Similarity=0.247 Sum_probs=61.6
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--cc-------------------------------
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KY------------------------------- 106 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~--~~------------------------------- 106 (447)
.++.+|.|+.-.|+||++++|.+.++.+.+.. .+.+..+... ..
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~ 97 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE---GAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIH 97 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC---ceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 47889999999999999999999988876543 2444444311 00
Q ss_pred ------------------------------------------hhhhhhCCCccccEEEEEeCCee-EEecCCCCHHHHHH
Q 013240 107 ------------------------------------------SRLASKQEIDAFPTLKIFMHGIP-TEYYGPRKAELLVR 143 (447)
Q Consensus 107 ------------------------------------------~~l~~~~~i~~~Ptl~~~~~g~~-~~y~g~~~~~~i~~ 143 (447)
.++++++||+|+||+++ +|+. +...|..+.+++.+
T Consensus 98 ~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~ 175 (184)
T 4dvc_A 98 TLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFD 175 (184)
T ss_dssp TSCCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHH
T ss_pred HHhhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHH
Confidence 13667789999999876 7764 34567778888887
Q ss_pred HHHHhcC
Q 013240 144 YLKKFVA 150 (447)
Q Consensus 144 fi~~~~~ 150 (447)
-++.++.
T Consensus 176 ~i~~Ll~ 182 (184)
T 4dvc_A 176 LVNYLLT 182 (184)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 7766543
No 325
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.58 E-value=0.00073 Score=60.25 Aligned_cols=86 Identities=15% Similarity=0.097 Sum_probs=62.6
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-------------------------------hhhh
Q 013240 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-------------------------------SRLA 110 (447)
Q Consensus 62 ~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-------------------------------~~l~ 110 (447)
.+|+.|+++||+.|....|.+.+++++++..+ +.+..|+++.. .+++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va 111 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRN--VKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA 111 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH
Confidence 45555679999999999999999999987643 77777776531 3466
Q ss_pred hhCCCc------------cccEEEEEeC-CeeEE-ecC----CCCHHHHHHHHHHhc
Q 013240 111 SKQEID------------AFPTLKIFMH-GIPTE-YYG----PRKAELLVRYLKKFV 149 (447)
Q Consensus 111 ~~~~i~------------~~Ptl~~~~~-g~~~~-y~g----~~~~~~i~~fi~~~~ 149 (447)
+.||+. ..|+.+++.. |+... +.| .++.++|.+.++.+.
T Consensus 112 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 112 ILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 677773 3699999964 66543 333 468888888887653
No 326
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.57 E-value=9.9e-05 Score=58.28 Aligned_cols=103 Identities=10% Similarity=0.160 Sum_probs=75.1
Q ss_pred ccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC----CceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----ELVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 255 ~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~----~~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
+..++.+++......++++++.|+.. ....-..+...+.++++.++ ++.|+.+|+.+.+++++.+++ ...|+
T Consensus 9 v~~l~~~~~~~~~~~~~~~lv~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt 84 (120)
T 1mek_A 9 VLVLRKSNFAEALAAHKYLLVEFYAP-WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV---RGYPT 84 (120)
T ss_dssp EEECCTTTHHHHHHHCSEEEEEEECS-SCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTC---CSSSE
T ss_pred cEEechhhHHHHHccCCeEEEEEECC-CCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCC---CcccE
Confidence 56778888888777778888777753 34434455567777888765 389999999988899999999 67999
Q ss_pred EEEEeCCccc--eecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 331 MVVWDGNENY--LTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 331 vvi~~~~~~y--~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
++++..++.. ..+. +..+.+.+.+|++..+.
T Consensus 85 ~~~~~~g~~~~~~~~~------g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 85 IKFFRNGDTASPKEYT------AGREADDIVNWLKKRTG 117 (120)
T ss_dssp EEEEESSCSSSCEECC------CCSSHHHHHHHHHTTSC
T ss_pred EEEEeCCCcCCccccc------CccCHHHHHHHHHhccC
Confidence 9999654332 3333 34457789999987654
No 327
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.57 E-value=7.8e-05 Score=63.61 Aligned_cols=65 Identities=11% Similarity=0.191 Sum_probs=46.5
Q ss_pred HHHhHccCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCCeE-EEEEeCcc---chhhhhhCCCc-ccc
Q 013240 53 FDSAISSFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIV-IAKVDADK---YSRLASKQEID-AFP 119 (447)
Q Consensus 53 f~~~~~~~~~~lV~f~~~~C~~C~~~-~p~~~~~a~~l~~~~~~v~-~~~Vd~~~---~~~l~~~~~i~-~~P 119 (447)
+.+++..++.+|+.|++.||+.|..- .|.+.++.++++..+ +. +..|+.+. ....++++++. .||
T Consensus 37 l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g--~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 37 VNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG--VDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp HHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT--CSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred HHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 33444444577888999999999998 999999999887654 55 77777754 24456667763 566
No 328
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.57 E-value=0.00042 Score=60.07 Aligned_cols=41 Identities=20% Similarity=0.308 Sum_probs=32.6
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA 103 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~ 103 (447)
.++.++.|+.+||++|..+.|.+.++.+.+. .+|.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~---~~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQA---KDVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSC---TTEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcC---CceEEEEeCc
Confidence 4678999999999999999999998887653 2477765554
No 329
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=0.00038 Score=55.69 Aligned_cols=107 Identities=11% Similarity=0.098 Sum_probs=78.2
Q ss_pred CCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
..+..++.++|+.+... ++++.|+. .....-......+.++++.++ ++.|+.+|+.+.+++++.+++ ...|+
T Consensus 7 ~~v~~l~~~~f~~~~~~--~vlv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt 80 (126)
T 1x5e_A 7 GNVRVITDENWRELLEG--DWMIEFYA-PWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFII---NALPT 80 (126)
T ss_dssp CSEEECCTTTHHHHTSS--EEEEEEEC-SSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred CccEEecHHHHHHHhCC--CEEEEEEC-CCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCC---cccCE
Confidence 34667888899876543 45555554 456666777888888888876 499999999999999999999 78999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
++++.. ++...+. +..+.+.+.+|++..+...+++
T Consensus 81 ~~~~~~-G~~~~~~------G~~~~~~l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 81 IYHCKD-GEFRRYQ------GPRTKKDFINFISDKEWKSIEP 115 (126)
T ss_dssp EEEEET-TEEEECC------SCCCHHHHHHHHHTCGGGGSCE
T ss_pred EEEEeC-CeEEEee------cCCCHHHHHHHHHHHhhccCCC
Confidence 999943 3333333 3456778999998876554444
No 330
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.55 E-value=0.0012 Score=52.23 Aligned_cols=106 Identities=10% Similarity=0.078 Sum_probs=78.0
Q ss_pred CCCccccChhhHHh-hhcCCC--cEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCC
Q 013240 252 LPLSVPINQDTLNL-LKDDKR--KIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 328 (447)
Q Consensus 252 ~p~~~~l~~~~~~~-~~~~~~--~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~ 328 (447)
+..+.+++.++|.. +...+. ++++.|+. .....-..+...|.++|++++++.|+.||+++. ...+++ ...
T Consensus 2 ~G~v~~it~~~f~~~v~~~~~~~~vvv~F~a-~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~---~~~~~v---~~~ 74 (118)
T 3evi_A 2 FGELREISGNQYVNEVTNAEEDVWVIIHLYR-SSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC---IQHYHD---NCL 74 (118)
T ss_dssp CCSCEECCGGGHHHHTTTCCTTCEEEEEEEC-TTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT---STTCCG---GGC
T ss_pred CcceEEeCHHHHHHHHHhcCCCCeEEEEEeC-CCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh---HHHCCC---CCC
Confidence 45567788888876 444333 67777765 456666788899999999999999999999764 577888 789
Q ss_pred ceEEEEeCCccceecCCCCCC-CcccchhHHHHHHHH
Q 013240 329 PKMVVWDGNENYLTVIGSESI-DEEDQGSQISRFLEG 364 (447)
Q Consensus 329 P~vvi~~~~~~y~~~~g~~~~-~~~~~~~~i~~Fl~~ 364 (447)
|+++++..++....+.|.... ....+.+.|..+|..
T Consensus 75 PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 75 PTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp SEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999987554455554432 236778899999864
No 331
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.54 E-value=0.00072 Score=54.03 Aligned_cols=97 Identities=11% Similarity=0.152 Sum_probs=71.4
Q ss_pred ChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEE
Q 013240 259 NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (447)
Q Consensus 259 ~~~~~~~~~~----~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~ 334 (447)
+.+.++.... .++++++.|+. .....-......|.+++++++++.|+.+|+++.+++++.+++ ...|+++++
T Consensus 23 ~~~~~~~~l~~~~~~~k~vvv~f~a-~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt~~~~ 98 (124)
T 1xfl_A 23 TVETWNEQLQKANESKTLVVVDFTA-SWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAI---QAMPTFMFL 98 (124)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTC---CSSSEEEEE
T ss_pred CHHHHHHHHHHhhhcCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCC---CccCEEEEE
Confidence 5566655433 35677777765 456666777888999999998899999999998999999999 789999888
Q ss_pred eCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 335 DGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 335 ~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
..++....+.| .+.+.+.++++.++
T Consensus 99 ~~G~~~~~~~G-------~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 99 KEGKILDKVVG-------AKKDELQSTIAKHL 123 (124)
T ss_dssp ETTEEEEEEES-------CCHHHHHHHHHHHC
T ss_pred ECCEEEEEEeC-------CCHHHHHHHHHHhc
Confidence 54433323332 24678999988765
No 332
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.53 E-value=0.00092 Score=57.10 Aligned_cols=88 Identities=17% Similarity=0.135 Sum_probs=65.3
Q ss_pred ccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeCccch---------------hhhh---hCCCc
Q 013240 58 SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKYS---------------RLAS---KQEID 116 (447)
Q Consensus 58 ~~~~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~~~~~---------------~l~~---~~~i~ 116 (447)
++.++.+|+++++||..|..+.... +++.+.++. .+.+...|.+... .++. .+++.
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~---nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~ 129 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ---NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTD 129 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH---TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCST
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc---CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCC
Confidence 3468999999999999999887433 345666655 3888888887653 4554 48999
Q ss_pred cccEEEEEeC--C--eeE-EecCCCCHHHHHHHHHHh
Q 013240 117 AFPTLKIFMH--G--IPT-EYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 117 ~~Ptl~~~~~--g--~~~-~y~g~~~~~~i~~fi~~~ 148 (447)
+||++.++.. + +.+ ...|..+++++.+.+...
T Consensus 130 ~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 130 QFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp TCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 9999999953 2 233 478999999988777654
No 333
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.50 E-value=0.00036 Score=56.06 Aligned_cols=103 Identities=11% Similarity=0.121 Sum_probs=74.2
Q ss_pred CCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 252 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
.|.+...+...+......++++++.|+. .....-......+.++++++++ +.|+.||++..+++++.+++ ...|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt 99 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFA-KWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSV---KSLPT 99 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTC---CSSSE
T ss_pred CCccccCCccHHHHHHccCCEEEEEEEC-CCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CCcCE
Confidence 4444555555566666667788877775 4566667778888999988875 99999999999999999999 78999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHH
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 364 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~ 364 (447)
+++++.++....+. +..+.+.+.+|++.
T Consensus 100 ~~~~~~G~~~~~~~------G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 100 IILLKNKTMLARKD------HFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEETTEEEEEES------SCCCHHHHHHHHTT
T ss_pred EEEEECCEEEEEec------CCCCHHHHHHHHHh
Confidence 99996443333333 34557788888753
No 334
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.49 E-value=0.00032 Score=56.69 Aligned_cols=111 Identities=10% Similarity=0.142 Sum_probs=80.0
Q ss_pred CCCccccChhhHHhhhc-CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CceEEEEeccchHhHHhhcCCCCCCC
Q 013240 252 LPLSVPINQDTLNLLKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQFADFADTFEANKKSK 327 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~-~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~~~~~~~~~~i~~~~~ 327 (447)
-+.+..++.++|..... .++++++.|+. .....-..+...|.++++.+. ++.|+.+|+...+.+++.+++ ..
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYA-PWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKV---EG 81 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECC-TTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCC---SS
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCC---Cc
Confidence 34567788888877554 35677766664 455566777788888888875 499999999888888888988 77
Q ss_pred CceEEEEeCCccce--ecCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 328 LPKMVVWDGNENYL--TVIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 328 ~P~vvi~~~~~~y~--~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
.|++++++.++... .+.| +..+.+.|.+|++..+.....
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g-----g~~~~~~l~~~l~~~~~~~~~ 122 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFEG-----GNRDLEHLSKFIDEHATKRSR 122 (133)
T ss_dssp SSEEEEECTTCTTSCEECCS-----SCCSTTHHHHHHHHHSSSCSS
T ss_pred CCEEEEEeCCCcccceEecC-----CCcCHHHHHHHHHHhcccccC
Confidence 99999998754221 2321 234567999999999876533
No 335
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.47 E-value=0.00076 Score=54.93 Aligned_cols=102 Identities=9% Similarity=0.204 Sum_probs=75.3
Q ss_pred ccChhhHHhhh----cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEE
Q 013240 257 PINQDTLNLLK----DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (447)
Q Consensus 257 ~l~~~~~~~~~----~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vv 332 (447)
..+.++|.... ..++++++.|+. .....-......+.+++++++++.|+.+|+++.+++++.+|+ ...|+++
T Consensus 29 i~~~~~~~~~~~~~~~~~k~vvv~f~a-~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 104 (139)
T 3d22_A 29 ITTKERWDQKLSEASRDGKIVLANFSA-RWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEI---KATPTFF 104 (139)
T ss_dssp ECSHHHHHHHHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CEESEEE
T ss_pred eCCHHHHHHHHHHHhhcCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCC---CcccEEE
Confidence 33456665543 245778877775 455666777888999999998899999999999999999999 7899998
Q ss_pred EEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 333 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 333 i~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
++..++....+.| . +.+.+.++++.++.+.
T Consensus 105 ~~~~G~~~~~~~G------~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 105 FLRDGQQVDKLVG------A-NKPELHKKITAILDSL 134 (139)
T ss_dssp EEETTEEEEEEES------C-CHHHHHHHHHHHHHTS
T ss_pred EEcCCeEEEEEeC------C-CHHHHHHHHHHHhccC
Confidence 8854433333333 2 4678999999998764
No 336
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.47 E-value=0.00031 Score=57.17 Aligned_cols=106 Identities=13% Similarity=0.150 Sum_probs=78.2
Q ss_pred CccccChhhHHhhhcCCCcEEEEEEeCCC-hhhHHHHHHHHHHHHHhCC-C-ceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 254 LSVPINQDTLNLLKDDKRKIVLAIVEDET-EEKSQKLVTTLKAAASANR-E-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~~~~vl~~~~~~~-~~~~~~~~~~l~~~a~~~~-~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
-+..++.++|+.....+.++++.|..+-- ...-.....+|.++|+++. + +.|+.||.+++++++..||+ ...|+
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV---~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGA---FRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTC---CSSSE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCC---ccCCE
Confidence 45588899998766666777775553210 2223456778999999996 4 89999999999999999999 88999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
++++..++.-....| ....+.+.++|+.+++.
T Consensus 95 lilFk~G~~v~~~~G------~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 95 TLVFTGGNYRGVLNG------IHPWAELINLMRGLVEP 126 (140)
T ss_dssp EEEEETTEEEEEEES------CCCHHHHHHHHHHHHC-
T ss_pred EEEEECCEEEEEEec------CCCHHHHHHHHHHHhcC
Confidence 999997654433433 34466899999988843
No 337
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.46 E-value=0.00022 Score=57.68 Aligned_cols=71 Identities=13% Similarity=0.231 Sum_probs=49.4
Q ss_pred hhhHHHhHccCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCCeEEEEEeCccc-------hhhhhhCCCccccEE
Q 013240 50 ESNFDSAISSFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIVIAKVDADKY-------SRLASKQEIDAFPTL 121 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~~~C~~C~~~-~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-------~~l~~~~~i~~~Ptl 121 (447)
.+.+++++...+ ++.|+++||++|+++ .+.+.+... ..+.+..+|.+.+ .++.+.+|..++|++
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~------~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v 98 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNV------PKSKALVLELDEMSNGSEIQDALEEISGQKTVPNV 98 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCC------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCc------cCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE
Confidence 456777776654 678999999999988 777665331 1144555666543 357888999999996
Q ss_pred EEEeCCeeE
Q 013240 122 KIFMHGIPT 130 (447)
Q Consensus 122 ~~~~~g~~~ 130 (447)
|.+|+.+
T Consensus 99 --fi~g~~i 105 (129)
T 3ctg_A 99 --YINGKHI 105 (129)
T ss_dssp --EETTEEE
T ss_pred --EECCEEE
Confidence 5677655
No 338
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.45 E-value=0.00016 Score=56.64 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=49.6
Q ss_pred hhhHHHhHccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCCccccE
Q 013240 50 ESNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPT 120 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~-----~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~~i~~~Pt 120 (447)
.+.++++++.++ ++.|+. +||++|+++.+.+.+. + +.+..+|.+.+++ +.+..|..++|+
T Consensus 5 ~~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~-----~----i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ 73 (109)
T 1wik_A 5 SSGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST-----G----VEYETFDILEDEEVRQGLKTFSNWPTYPQ 73 (109)
T ss_dssp CCCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT-----C----SCEEEEESSSCHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc-----C----CCeEEEECCCCHHHHHHHHHHhCCCCCCE
Confidence 355788887655 445777 9999999998888653 2 6688899988765 444568889998
Q ss_pred EEEEeCCeeE
Q 013240 121 LKIFMHGIPT 130 (447)
Q Consensus 121 l~~~~~g~~~ 130 (447)
+ |.+|+.+
T Consensus 74 i--fi~g~~i 81 (109)
T 1wik_A 74 L--YVRGDLV 81 (109)
T ss_dssp E--ECSSSEE
T ss_pred E--EECCEEE
Confidence 5 5677644
No 339
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.45 E-value=0.00023 Score=58.59 Aligned_cols=107 Identities=8% Similarity=0.090 Sum_probs=65.9
Q ss_pred CccccChhhHHhhhcCCCcEEEEEEeCC-ChhhHHHHHHHHHHHHHhCCCce--EEEEeccchHhHHhhcCCCCCCCCce
Q 013240 254 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELV--FCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~~~~vl~~~~~~-~~~~~~~~~~~l~~~a~~~~~~~--f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
.+..++.++|+.........++.|..+- ....-......|.++++++.++. |+.||+++.+++++.|++ ...|+
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V---~~iPT 94 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNV---RRFPA 94 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTC---CSSSE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCC---CcCCe
Confidence 4667788888887665556666554221 12333456678888999984488 999999999999999999 78999
Q ss_pred EEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 331 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 331 vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
++++..++....+. +..+.+.+.+|++..+...
T Consensus 95 ~~~fk~G~~v~~~~------G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 95 TLVFTDGKLRGALS------GIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp EEEESCC----CEE------SCCCHHHHHHHHHHHHC--
T ss_pred EEEEeCCEEEEEEe------CCCCHHHHHHHHHHHhccc
Confidence 99995433222233 3345678999999887643
No 340
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.45 E-value=0.00039 Score=58.70 Aligned_cols=57 Identities=12% Similarity=0.200 Sum_probs=42.0
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh---hhhhCCCcccc
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR---LASKQEIDAFP 119 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~---l~~~~~i~~~P 119 (447)
..++++|.|| +.||++|....|.+.++.+.+ . .+.+..|+++.... .++++++..+|
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~---~v~vv~Is~d~~~~~~~~~~~~~~~~~~ 102 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S---NTIVLCISADLPFAQARFCGAEGIENAK 102 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T---TEEEEEEESSCHHHHTTCTTTTTCTTEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CCEEEEEeCCCHHHHHHHHHHcCCCceE
Confidence 3578999999 899999999999999998887 2 38888888864322 34445553343
No 341
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.41 E-value=0.002 Score=50.83 Aligned_cols=102 Identities=19% Similarity=0.281 Sum_probs=73.4
Q ss_pred Ccccc--ChhhHH-hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCce
Q 013240 254 LSVPI--NQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPK 330 (447)
Q Consensus 254 ~~~~l--~~~~~~-~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~ 330 (447)
.+..+ +...+. .+...++++++.|+. .....-......|.+++..+.++.|+.+|++..+++++.+++ ...|+
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a-~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i---~~~Pt 79 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFA-TWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGV---SSIPA 79 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCC---CCCCE
Confidence 34445 567776 455566788877775 355666777888999999996799999999999999999999 68999
Q ss_pred EEEEeC----CccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 331 MVVWDG----NENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 331 vvi~~~----~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+++++. .+....+.|. ..+.|.+.+..+.
T Consensus 80 ~~~~~~~~~~G~~~~~~~G~-------~~~~l~~~~~~~~ 112 (118)
T 2f51_A 80 LFFVKKEGNEIKTLDQFVGA-------DVSRIKADIEKFK 112 (118)
T ss_dssp EEEEEEETTEEEEEEEEESC-------CHHHHHHHHHHHC
T ss_pred EEEEeCCCCcceEEEeecCC-------CHHHHHHHHHHhh
Confidence 999976 3222223321 2346888887664
No 342
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.39 E-value=0.0042 Score=50.35 Aligned_cols=117 Identities=11% Similarity=0.054 Sum_probs=79.4
Q ss_pred CCCCccccChhhHHhhhcC-C--CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCC
Q 013240 251 FLPLSVPINQDTLNLLKDD-K--RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 327 (447)
Q Consensus 251 ~~p~~~~l~~~~~~~~~~~-~--~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~ 327 (447)
.+..+.+++.+++...... + +++++.|+. .....-..+...|.+++.++.++.|+.||+.+.. +.+++ ..
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a-~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~---~~~~i---~~ 80 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYR-SSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCI---EHYHD---NC 80 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECC-TTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC---SSCCS---SC
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEEC-CCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc---ccCCC---CC
Confidence 3455667788888764432 2 456666654 4666667788899999999988999999997654 67888 78
Q ss_pred CceEEEEeCCccceecCCCCCCCc-ccchhHHHHHHHHHhcCcccccccc
Q 013240 328 LPKMVVWDGNENYLTVIGSESIDE-EDQGSQISRFLEGYREGRTEQKKVA 376 (447)
Q Consensus 328 ~P~vvi~~~~~~y~~~~g~~~~~~-~~~~~~i~~Fl~~~~~gkl~~~~ks 376 (447)
.|++++++..+....+.|...+.+ .++.+.|.+++... |-+.....+
T Consensus 81 ~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~--~~i~~~~~~ 128 (135)
T 2dbc_A 81 LPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV--GAIQSDLEE 128 (135)
T ss_dssp CSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH--TSSCCCSCC
T ss_pred CCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc--CCccccccC
Confidence 999999985544444444432221 34678899999886 444443333
No 343
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.39 E-value=0.00096 Score=59.79 Aligned_cols=88 Identities=9% Similarity=-0.018 Sum_probs=64.7
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc-----------------------------hh
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-----------------------------SR 108 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~-----------------------------~~ 108 (447)
.++++++.|| ++||+.|....+.+.++.++++..+ +.+..|+++.. .+
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~--v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~ 105 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRG--VKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRE 105 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCH
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcC--CEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHH
Confidence 3358888888 9999999999999999999887643 77777776531 24
Q ss_pred hhhhCCCc------------cccEEEEEeC-CeeEE-ecC----CCCHHHHHHHHHHh
Q 013240 109 LASKQEID------------AFPTLKIFMH-GIPTE-YYG----PRKAELLVRYLKKF 148 (447)
Q Consensus 109 l~~~~~i~------------~~Ptl~~~~~-g~~~~-y~g----~~~~~~i~~fi~~~ 148 (447)
+++.||+. ..|+.+++.. |+... +.| .++.++|.+.++.+
T Consensus 106 va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 106 LAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 56667774 4789998864 65543 322 46788888888765
No 344
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.33 E-value=0.00053 Score=59.99 Aligned_cols=57 Identities=11% Similarity=0.146 Sum_probs=42.2
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh---hhhhCCCcccc
Q 013240 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR---LASKQEIDAFP 119 (447)
Q Consensus 59 ~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~---l~~~~~i~~~P 119 (447)
..++++|.|| +.||+.|....|.+.++.+.+ . .+.+..|+++.... .++++++..+|
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~---~v~vv~Is~D~~~~~~~~~~~~~~~~f~ 137 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E---NTVVLCISSDLPFAQSRFCGAEGLSNVI 137 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T---TEEEEEEESSCHHHHTTCTTTTTCTTEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C---CCEEEEEECCCHHHHHHHHHHcCCCCce
Confidence 3579999999 789999999999999999887 2 38888888864322 34445553333
No 345
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.29 E-value=0.0016 Score=52.80 Aligned_cols=102 Identities=11% Similarity=0.030 Sum_probs=76.1
Q ss_pred ccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEec---------cchHhHHhhcCCCCC
Q 013240 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI---------KQFADFADTFEANKK 325 (447)
Q Consensus 255 ~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~---------~~~~~~~~~~~i~~~ 325 (447)
+..++.+++...... ++++.|+. .....-......+.+++++++ +.|+.+|+ +..+++++.+++
T Consensus 18 v~~l~~~~~~~~~~~--~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v--- 90 (135)
T 3emx_A 18 LIYITPEEFRQLLQG--DAILAVYS-KTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGV--- 90 (135)
T ss_dssp EEECCHHHHHHHHTS--SEEEEEEE-TTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTC---
T ss_pred eeecCHHHHHHHhCC--cEEEEEEC-CcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCC---
Confidence 456777778776654 77777775 356666777888999999888 99999999 778899999999
Q ss_pred CCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 326 SKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 326 ~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
...|++++++.++....+. +..+.+.+.++++...++.
T Consensus 91 ~~~Pt~~~~~~G~~v~~~~------G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 91 EGTPTLVFYKEGRIVDKLV------GATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp CSSSEEEEEETTEEEEEEE------SCCCHHHHHHHHHHHC---
T ss_pred ceeCeEEEEcCCEEEEEEe------CCCCHHHHHHHHHHHhCCC
Confidence 7899999999544333343 3345678999999888764
No 346
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.26 E-value=0.0011 Score=58.85 Aligned_cols=85 Identities=19% Similarity=0.167 Sum_probs=61.1
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc----------------------------hhhhhhC
Q 013240 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----------------------------SRLASKQ 113 (447)
Q Consensus 62 ~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~----------------------------~~l~~~~ 113 (447)
.+|+.|+++||+.|....|.+.+++++++..+ +.+..|+++.. .++++.|
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~y 111 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLN--CKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKL 111 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcC--CEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHh
Confidence 44444579999999999999999999987643 77777877531 2456667
Q ss_pred CCc------------cccEEEEEeC-CeeEE-ec----CCCCHHHHHHHHHHh
Q 013240 114 EID------------AFPTLKIFMH-GIPTE-YY----GPRKAELLVRYLKKF 148 (447)
Q Consensus 114 ~i~------------~~Ptl~~~~~-g~~~~-y~----g~~~~~~i~~fi~~~ 148 (447)
|+. ..|+.+++.. |+... +. ..++.++|.+.++.+
T Consensus 112 gv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 112 KIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp TCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 773 3689998864 65543 32 357888888888765
No 347
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.25 E-value=0.0013 Score=59.01 Aligned_cols=103 Identities=16% Similarity=0.234 Sum_probs=73.9
Q ss_pred CCccccChhhHHhhhcCCCcEEEEEEe-CCChhhHHHHHHHHHHHHHhCC---CceEEEEe-----ccchHhHHhhcCCC
Q 013240 253 PLSVPINQDTLNLLKDDKRKIVLAIVE-DETEEKSQKLVTTLKAAASANR---ELVFCYVG-----IKQFADFADTFEAN 323 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~~~~~~vl~~~~-~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd-----~~~~~~~~~~~~i~ 323 (447)
..+..++..+|+.+...+.++++.|+. ..... +...+.++|..+. ++.|+.|| |..++++|+.+++
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V- 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL- 79 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC-
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC-
Confidence 346788999999877666777777764 02333 6677888888764 49999999 4458999999999
Q ss_pred CCCCCceEEEEeCCc--cceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 324 KKSKLPKMVVWDGNE--NYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 324 ~~~~~P~vvi~~~~~--~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
....+|++.++..++ ....+. +..+.+.|.+|+....
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~------G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYT------GAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECC------SCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCcceeec------CCCCHHHHHHHHHHhc
Confidence 212899999997643 223333 3445779999998874
No 348
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.24 E-value=0.00051 Score=58.56 Aligned_cols=55 Identities=9% Similarity=0.065 Sum_probs=37.3
Q ss_pred CCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhhcCCCCeEEE-EEeCcc---chhhhhhCCCc
Q 013240 60 FDYILVDFY-APWCGHCK-RLAPQLDEAAPILAKLKEPIVIA-KVDADK---YSRLASKQEID 116 (447)
Q Consensus 60 ~~~~lV~f~-~~~C~~C~-~~~p~~~~~a~~l~~~~~~v~~~-~Vd~~~---~~~l~~~~~i~ 116 (447)
.+++++.|| +.||+.|. .-.|.+.+++++++..+ +.+. .|.++. ....++++++.
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g--v~vv~~iS~D~~~~~~~f~~~~~~~ 103 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG--VQVVACLSVNDAFVTGEWGRAHKAE 103 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CEEEEEEcCCCHHHHHHHHHHhCCC
Confidence 355555555 99999999 58899999999988654 4444 366653 23445555554
No 349
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.20 E-value=0.0022 Score=57.88 Aligned_cols=105 Identities=11% Similarity=0.215 Sum_probs=75.0
Q ss_pred CCccccChhhHHhhhcCCCcEEEEEEe-CCChhhHHHHHHHHHHHHHhC----CCceEEEEeccc-----hHhHHhhcCC
Q 013240 253 PLSVPINQDTLNLLKDDKRKIVLAIVE-DETEEKSQKLVTTLKAAASAN----RELVFCYVGIKQ-----FADFADTFEA 322 (447)
Q Consensus 253 p~~~~l~~~~~~~~~~~~~~~vl~~~~-~~~~~~~~~~~~~l~~~a~~~----~~~~f~~vd~~~-----~~~~~~~~~i 322 (447)
+.+..++..+|+.+...+.++++.|+. ..... +...+.++|..+ .++.|+.||+++ ++++|+.|++
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V 91 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV 91 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTC
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCC
Confidence 446788999999877777777777772 23443 666777788775 359999999988 7899999999
Q ss_pred CCCCCCceEEEEeCCcc--ceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 323 NKKSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 323 ~~~~~~P~vvi~~~~~~--y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
....+|++.++. ++. ...+. ..+..+.+.|.+|+.....
T Consensus 92 -~~~~~PTl~~F~-G~~~~~~~y~----~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 92 -DDKNFPSIFLFK-GNADEYVQLP----SHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp -CTTSCCEEEEES-SSSSSEEECC----TTSCCCHHHHHHHHHHHSS
T ss_pred -CcCCCCeEEEEe-CCcCcceeec----ccCCCCHHHHHHHHHHhhc
Confidence 222899999998 431 22220 0234567799999998754
No 350
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.17 E-value=0.0013 Score=51.99 Aligned_cols=104 Identities=11% Similarity=0.156 Sum_probs=74.6
Q ss_pred CCccccChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC------CceEEEEeccchHhHHhhcCCCCC
Q 013240 253 PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR------ELVFCYVGIKQFADFADTFEANKK 325 (447)
Q Consensus 253 p~~~~l~~~~~~~~~-~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~------~~~f~~vd~~~~~~~~~~~~i~~~ 325 (447)
..+..++.+++.... ..++++++.|+.. ....-..+...+.+++++++ ++.|+.+|+...+ +++ ++
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v--- 79 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAP-WCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EI--- 79 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECS-SCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CC---
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECC-CCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--cc---
Confidence 356678888888763 5667888877753 55555677778888888775 4899999997654 444 66
Q ss_pred CCCceEEEEeCCcc--ceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 326 SKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 326 ~~~P~vvi~~~~~~--y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
...|++++++.++. ...+. +..+.+.+.+|++..+..+
T Consensus 80 ~~~Pt~~~~~~~~~~~~~~~~------G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 80 QGFPTIKLYPAGAKGQPVTYS------GSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSSSEEEEECSSCTTSCCCCC------CCSCHHHHHHHHHHTSSSC
T ss_pred CcCCeEEEEeCcCCCCceEec------CCCCHHHHHHHHHhccCcC
Confidence 78999999988644 33333 3456789999998876543
No 351
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.16 E-value=0.0023 Score=52.92 Aligned_cols=107 Identities=15% Similarity=0.209 Sum_probs=75.1
Q ss_pred ChhhHHhh-h-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEEEe
Q 013240 259 NQDTLNLL-K-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (447)
Q Consensus 259 ~~~~~~~~-~-~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~ 335 (447)
+..+|+.. . ..++++++-|.. .-...-......|.++|.++.+ +.|+.||.++.++++..+++ ...|+++++.
T Consensus 28 t~~~f~~~v~~~~~k~VVVdF~A-~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V---~siPT~~fFk 103 (160)
T 2av4_A 28 SGWAVDQAIVNEDERLVCIRFGH-DYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYEL---YDPVSVMFFY 103 (160)
T ss_dssp SHHHHHHHHHHCSSSEEEEEEEC-TTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTC---CSSEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEEC-CCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCC---CCCCEEEEEE
Confidence 45777653 3 356778887775 3566667888999999999976 99999999999999999999 7899998887
Q ss_pred CCccceec--CCC-CCCCcccc-hhHHHHHHHHHhcCc
Q 013240 336 GNENYLTV--IGS-ESIDEEDQ-GSQISRFLEGYREGR 369 (447)
Q Consensus 336 ~~~~y~~~--~g~-~~~~~~~~-~~~i~~Fl~~~~~gk 369 (447)
.++....- .|. ..+.+... .+.+.++|+.++.|-
T Consensus 104 ~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a 141 (160)
T 2av4_A 104 RNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGA 141 (160)
T ss_dssp TTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHh
Confidence 65432100 010 01223333 667777777776654
No 352
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.16 E-value=0.0013 Score=60.79 Aligned_cols=107 Identities=11% Similarity=0.177 Sum_probs=79.3
Q ss_pred CCCccccChhhHHhhhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCC
Q 013240 252 LPLSVPINQDTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 328 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~~--~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~ 328 (447)
.+.+..+|..+|+.+... ++++++.|+.. ....-......+.++++++++ +.|+.||+++.+++++.|++ ...
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~ 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSE-RSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGL---RAI 81 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECT-TCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTC---CSS
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECC-CChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCC---CCC
Confidence 456778999999886643 67788877753 444445556678888888876 99999999999999999999 789
Q ss_pred ceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 329 PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 329 P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
|+++++..++....+. +..+.+.+.+|+.....+
T Consensus 82 Pt~~~~~~G~~~~~~~------g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 82 PTVYLFQNGQPVDGFQ------GPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp SEEEEEETTEEEEEEE------SCCCHHHHHHHHHHHSCC
T ss_pred CeEEEEECCEEEEEee------CCCCHHHHHHHHHHHcCC
Confidence 9999996543322233 334567899999887643
No 353
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.11 E-value=0.003 Score=52.28 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=76.6
Q ss_pred cChhhHHhhh--cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEEE
Q 013240 258 INQDTLNLLK--DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (447)
Q Consensus 258 l~~~~~~~~~--~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~ 334 (447)
.+.++++... ..++++++.|+. .....-......|.++++++++ +.|+.||+++.+++++.+++ ...|+++++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a-~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v---~~~Pt~~~~ 84 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGR-DEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDI---SYIPSTVFF 84 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEEC-TTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTC---CSSSEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCC---CccCeEEEE
Confidence 3566776654 446777777765 4566667788899999999987 99999999999999999999 789999977
Q ss_pred eCCccceecCCC---CCCCc-ccchhHHHHHHHHHhcCc
Q 013240 335 DGNENYLTVIGS---ESIDE-EDQGSQISRFLEGYREGR 369 (447)
Q Consensus 335 ~~~~~y~~~~g~---~~~~~-~~~~~~i~~Fl~~~~~gk 369 (447)
..++....--|. ..+.+ ..+.+.+.++++.+..|.
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp ETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHH
T ss_pred ECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHh
Confidence 654333110110 11123 445678999998887654
No 354
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.09 E-value=0.00036 Score=55.82 Aligned_cols=102 Identities=15% Similarity=0.247 Sum_probs=66.8
Q ss_pred ccccChhhHHh-hhcCCCcEEEEEEeCCChh--------------hHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHh
Q 013240 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEE--------------KSQKLVTTLKAAASANRE-LVFCYVGIKQFADFAD 318 (447)
Q Consensus 255 ~~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~--------------~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~ 318 (447)
+..++.++|.. +...++++++.|+.+ ... .-......+.++++++++ +.|+.+|+++.+++++
T Consensus 5 v~~l~~~~f~~~~~~~~k~vlv~F~a~-wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~ 83 (123)
T 1oaz_A 5 IIHLTDDSFDTDVLKADGAILVDFWAE-WCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 83 (123)
T ss_dssp CEECCSTTHHHHTTSCSSEEEEEEECS-SCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGG
T ss_pred cEecChhhHHHHHHhCCCeEEEEEECC-CCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHH
Confidence 55678888874 556667888777754 333 333444567777777764 9999999999899999
Q ss_pred hcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 319 TFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 319 ~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
.+|+ ...|+++++..++....+.| ..+.+.+.+|++..+
T Consensus 84 ~~~v---~~~Pt~~~~~~G~~~~~~~G------~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 84 KYGI---RGIPTLLLFKNGEVAATKVG------ALSKGQLKEFLDANL 122 (123)
T ss_dssp GGTC---CBSSEEEEEESSSEEEEEES------CCCHHHHHHHHTTTC
T ss_pred HcCC---CccCEEEEEECCEEEEEEeC------CCCHHHHHHHHHHHh
Confidence 9999 67999999844333333333 345678888887543
No 355
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.09 E-value=0.00074 Score=58.69 Aligned_cols=45 Identities=18% Similarity=0.373 Sum_probs=37.5
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~ 106 (447)
..++.+|.|+++||+||+.+.|.+.++.+.+.+ ++.|..++..-+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~---~v~~~~~p~~~~ 67 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD---DMYLRTEHVVWQ 67 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT---TEEEEEEECCCS
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC---CeEEEEecCCCC
Confidence 357899999999999999999999999876543 588988887643
No 356
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.98 E-value=0.0034 Score=49.92 Aligned_cols=101 Identities=9% Similarity=0.137 Sum_probs=70.9
Q ss_pred CccccChhhHHhhhcC--CCcEEEEEEeCC------ChhhHHHHHHHHHHHHHhCC-CceEEEEec-------cchHhHH
Q 013240 254 LSVPINQDTLNLLKDD--KRKIVLAIVEDE------TEEKSQKLVTTLKAAASANR-ELVFCYVGI-------KQFADFA 317 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~--~~~~vl~~~~~~------~~~~~~~~~~~l~~~a~~~~-~~~f~~vd~-------~~~~~~~ 317 (447)
.+...+.+++...... ++++++.|+... ....-......+.+++++++ ++.|+.+|+ +..+.++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 3445667777765443 677777776531 45566777888999999987 499999999 6778899
Q ss_pred hhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHH
Q 013240 318 DTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 364 (447)
Q Consensus 318 ~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~ 364 (447)
+.+++ ...|++++++..++..-. ...+.+.|.+|+++
T Consensus 86 ~~~~i---~~~Pt~~~~~~~~~~~g~-------~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLKV---TAVPTLLKYGTPQKLVES-------ECLQANLVEMLFSE 122 (123)
T ss_dssp HHHCC---CSSSEEEETTSSCEEEGG-------GGGCHHHHHHHHHC
T ss_pred HHCCC---CeeCEEEEEcCCceEecc-------ccCCHHHHHHHHhc
Confidence 99999 789999999874322211 11345678888763
No 357
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.94 E-value=0.0092 Score=48.10 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=68.7
Q ss_pred ccChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhCCCceEEEEec----cchHhHHhhcCCCCCCC
Q 013240 257 PINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTL---KAAASANRELVFCYVGI----KQFADFADTFEANKKSK 327 (447)
Q Consensus 257 ~l~~~~~~~~~~--~~~~~vl~~~~~~~~~~~~~~~~~l---~~~a~~~~~~~f~~vd~----~~~~~~~~~~~i~~~~~ 327 (447)
..+.+.+..... .++++++.|+. .....-......+ .++++.++++.|+.+|+ ....++++.+++ ..
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a-~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v---~~ 91 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYA-DWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV---LG 91 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEEC-TTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC---CS
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEEC-CCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC---CC
Confidence 334455554332 25778877775 3455445555666 77888888899999999 556889999999 67
Q ss_pred CceEEEEeCCccc---eecCCCCCCCcccchhHHHHHHHHH
Q 013240 328 LPKMVVWDGNENY---LTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 328 ~P~vvi~~~~~~y---~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
.|++++++.+++. ..+ .+..+.+.+.++++.+
T Consensus 92 ~Pt~~~~d~~G~~v~~~~~------~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 92 LPTILFFDGQGQEHPQARV------TGFMDAETFSAHLRDR 126 (134)
T ss_dssp SSEEEEECTTSCBCGGGCB------CSCCCHHHHHHHHHHC
T ss_pred CCEEEEECCCCCEeeeeee------eeccCHHHHHHHHHhc
Confidence 9999999876543 233 3445677888888765
No 358
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.91 E-value=0.0056 Score=47.54 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=67.2
Q ss_pred ChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHh----HHhhcCCCCCCCCceEEEE
Q 013240 259 NQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFAD----FADTFEANKKSKLPKMVVW 334 (447)
Q Consensus 259 ~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~----~~~~~~i~~~~~~P~vvi~ 334 (447)
+.+.|+.+...++|+++.++. ............+.+++.. .++.|.++|..++.+ .+..+|+ ....|+++++
T Consensus 13 s~e~f~~ii~~~~~vvi~kha-twCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V--~h~sPq~il~ 88 (112)
T 3iv4_A 13 SIDQFEQVIEENKYVFVLKHS-ETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNV--KHESPQAFYF 88 (112)
T ss_dssp SHHHHHHHHHHCSEEEEEEEC-TTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTC--CCCSSEEEEE
T ss_pred CHHHHHHHHhcCCCEEEEEEC-CcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCC--ccCCCeEEEE
Confidence 556777776667788877765 4666667778888888876 569999999998866 7899999 1369999999
Q ss_pred eCCc-cceecCCCCCCCcccchhHHHHHH
Q 013240 335 DGNE-NYLTVIGSESIDEEDQGSQISRFL 362 (447)
Q Consensus 335 ~~~~-~y~~~~g~~~~~~~~~~~~i~~Fl 362 (447)
..++ .+..- ...++.+.|.+.+
T Consensus 89 k~G~~v~~~S------H~~I~~~~l~~~~ 111 (112)
T 3iv4_A 89 VNGEMVWNRD------HGDINVSSLAQAE 111 (112)
T ss_dssp ETTEEEEEEE------GGGCSHHHHHHHT
T ss_pred ECCEEEEEee------ccccCHHHHHHhh
Confidence 8764 33221 2345566666654
No 359
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.90 E-value=0.0039 Score=48.94 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=69.3
Q ss_pred CCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEec----cchHhHHhhcCCCCCC
Q 013240 252 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGI----KQFADFADTFEANKKS 326 (447)
Q Consensus 252 ~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~----~~~~~~~~~~~i~~~~ 326 (447)
...+..++.+.+......++++++.|+. .....-..+...+.++++++.. +.++-++. ....++++.+|+ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a-~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i---~ 86 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALDKKETATFFIGR-KTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGI---P 86 (118)
T ss_dssp TTTSEECCHHHHHHHHHTTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTC---C
T ss_pred HhhhhcCCHHHHHHHHhCCCeEEEEEEC-CCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCC---C
Confidence 4456778888888877777788877765 4566667778888888887753 54443322 234578889999 7
Q ss_pred CCceEEEEeCCccceecCCCCCCCcccchhHHHHHHH
Q 013240 327 KLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 363 (447)
Q Consensus 327 ~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~ 363 (447)
..|++++++.++....+. +..+.+.|.+|++
T Consensus 87 ~~Pt~~~~~~G~~~~~~~------G~~~~~~l~~~l~ 117 (118)
T 1zma_A 87 TVPGFVHITDGQINVRCD------SSMSAQEIKDFAG 117 (118)
T ss_dssp SSCEEEEEETTEEEEECC------TTCCHHHHHHHHT
T ss_pred CCCeEEEEECCEEEEEec------CCCCHHHHHHHhh
Confidence 899999987544333333 3445678888874
No 360
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.89 E-value=0.0038 Score=56.21 Aligned_cols=109 Identities=20% Similarity=0.306 Sum_probs=77.8
Q ss_pred CCCcccc-ChhhHHhhhc---CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCC
Q 013240 252 LPLSVPI-NQDTLNLLKD---DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 327 (447)
Q Consensus 252 ~p~~~~l-~~~~~~~~~~---~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~ 327 (447)
+..+.++ +..+|..... .+.++++.|+. .....-......|..+|.+++++.|+.||+.. +.++..|++ ..
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya-~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I---~~ 185 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYE-DGIKGCDALNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSS---DV 185 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEEC-TTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCT---TT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEEC-CCChHHHHHHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCC---CC
Confidence 3456666 6788877553 25677777775 45566677788899999999999999999976 667788888 78
Q ss_pred CceEEEEeCCccceecCCCCCC-CcccchhHHHHHHHHH
Q 013240 328 LPKMVVWDGNENYLTVIGSESI-DEEDQGSQISRFLEGY 365 (447)
Q Consensus 328 ~P~vvi~~~~~~y~~~~g~~~~-~~~~~~~~i~~Fl~~~ 365 (447)
+|+++++..+.....+.|.... ....+.+.|..||...
T Consensus 186 ~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 186 LPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 9999999855443444454322 2335677899998764
No 361
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.91 E-value=0.00016 Score=55.51 Aligned_cols=100 Identities=4% Similarity=0.166 Sum_probs=68.6
Q ss_pred cccChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 256 VPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 256 ~~l~~~~~~~-~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
..++.+++.. +...++++++.|+. .....-......+.++++.+++ +.|+.+|++..+++++.+++ ...|++++
T Consensus 4 ~~l~~~~~~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 79 (106)
T 2yj7_A 4 IEVTDENFEQEVLKSDKPVLVDFWA-PWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGI---RSIPTLLL 79 (106)
Confidence 4566666664 44556677776764 3455556667788888888874 99999999988999999998 67999998
Q ss_pred EeCCccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 334 WDGNENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 334 ~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
+..++....+. +..+.+.+.+|++..
T Consensus 80 ~~~g~~~~~~~------g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 80 FKNGQVVDRLV------GAQPKEALKERIDKH 105 (106)
Confidence 84333222232 233455777777654
No 362
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.85 E-value=0.0064 Score=48.81 Aligned_cols=98 Identities=10% Similarity=0.162 Sum_probs=67.8
Q ss_pred cCCCcEEEEEEeCCChhhHHHHHHHHH--HHHHhCC-CceEEEEec---cchHhHHhhcCCCCCCCCceEEEEeCCcc-c
Q 013240 268 DDKRKIVLAIVEDETEEKSQKLVTTLK--AAASANR-ELVFCYVGI---KQFADFADTFEANKKSKLPKMVVWDGNEN-Y 340 (447)
Q Consensus 268 ~~~~~~vl~~~~~~~~~~~~~~~~~l~--~~a~~~~-~~~f~~vd~---~~~~~~~~~~~i~~~~~~P~vvi~~~~~~-y 340 (447)
..++++++.|+. .....-......|. +++..+. ++.|+.||. ....++++.+++......|++++++.+++ .
T Consensus 27 ~~~k~vlv~f~a-~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 27 RTHKPTLLVFGA-NWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp HHTCCEEEEEEC-TTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred hcCCcEEEEEcC-CCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 456788877775 35555566666777 7777764 499999999 78899999998832267999999977653 2
Q ss_pred eecCC-CCCCCcccchhHHHHHHHHHh
Q 013240 341 LTVIG-SESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 341 ~~~~g-~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
....| ........+.+.+.+|++.+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHhc
Confidence 22333 222223457789999998764
No 363
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.84 E-value=0.0098 Score=48.62 Aligned_cols=107 Identities=16% Similarity=0.239 Sum_probs=74.4
Q ss_pred ChhhHHh-hhc-CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEEEe
Q 013240 259 NQDTLNL-LKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (447)
Q Consensus 259 ~~~~~~~-~~~-~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~ 335 (447)
+.++++. +.. .++++++.|+. .....-......+.++++++.+ +.|+.||+++.+++++.+++ ...|++++++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i---~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGH-DWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL---YDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEEC-TTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCS---CSSCEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCC---CCCCEEEEEE
Confidence 4667765 333 46777777765 4566667778889999988854 99999999988999999999 7899999987
Q ss_pred CCccceecCCCC---CCCccc-chhHHHHHHHHHhcCc
Q 013240 336 GNENYLTVIGSE---SIDEED-QGSQISRFLEGYREGR 369 (447)
Q Consensus 336 ~~~~y~~~~g~~---~~~~~~-~~~~i~~Fl~~~~~gk 369 (447)
.++......|.. .+.+.. +.+.+.++++.++.|.
T Consensus 86 ~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~ 123 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGA 123 (142)
T ss_dssp TTEEEEEECC------CCSCCSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHH
Confidence 654322211210 122233 3678999999888774
No 364
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.83 E-value=0.0034 Score=55.50 Aligned_cols=109 Identities=19% Similarity=0.334 Sum_probs=76.7
Q ss_pred CCCcccc-ChhhHHhhhc-CC--CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCC
Q 013240 252 LPLSVPI-NQDTLNLLKD-DK--RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 327 (447)
Q Consensus 252 ~p~~~~l-~~~~~~~~~~-~~--~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~ 327 (447)
+..+.++ +..+|..... .. .++++.|+. .....-..+...|..+|..++++.|+.||+. .+.++..|++ ..
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a-~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i---~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYE-DGVRGCDALNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSS---DV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEEC-TTSTTHHHHHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCG---GG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEEC-CCCccHHHHHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCC---CC
Confidence 3445666 7788876543 22 677777775 4556667788899999999988999999998 6778888888 78
Q ss_pred CceEEEEeCCccceecCCCCC-CCcccchhHHHHHHHHH
Q 013240 328 LPKMVVWDGNENYLTVIGSES-IDEEDQGSQISRFLEGY 365 (447)
Q Consensus 328 ~P~vvi~~~~~~y~~~~g~~~-~~~~~~~~~i~~Fl~~~ 365 (447)
+|+++++..++....+.|... ....++.+.|.+||...
T Consensus 173 ~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 LPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999975443333444322 12345568899998753
No 365
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.77 E-value=0.00058 Score=54.76 Aligned_cols=100 Identities=10% Similarity=0.197 Sum_probs=68.1
Q ss_pred ChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEE
Q 013240 259 NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (447)
Q Consensus 259 ~~~~~~~~~~----~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~ 334 (447)
+.+.+..... .++++++.|+.. ....-......|.++++.++++.|+.+|+++.+++++.+++ ...|+++++
T Consensus 21 ~~~~~~~~l~~~~~~~~~~vv~f~~~-~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~ 96 (130)
T 1wmj_A 21 NKDEFDAQMTKAKEAGKVVIIDFTAS-WCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNV---EAMPTFLFI 96 (130)
T ss_dssp SSHHHHHHHHHHHTTTCBCBEECCSS-SCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTC---CSSCCCCBC
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECC-CChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCC---CccceEEEE
Confidence 4455554332 356777766642 33333344556778888888899999999988999999999 789998888
Q ss_pred eCCccceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 335 DGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 335 ~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
..++....+.| .+.+.+.+|++.++...
T Consensus 97 ~~g~~~~~~~g-------~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 97 KDGAEADKVVG-------ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp TTTTCCBCCCT-------TCTTTHHHHHHHHTSSS
T ss_pred eCCeEEEEEeC-------CCHHHHHHHHHHHHhcc
Confidence 54333333333 23568999999988654
No 366
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.76 E-value=0.0078 Score=52.51 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=60.9
Q ss_pred cCCeEEEEEECCCChhhhhhhHHH-HHHHHHhhcCCCCeEEEEEeCccc-------------------------------
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQL-DEAAPILAKLKEPIVIAKVDADKY------------------------------- 106 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~-~~~a~~l~~~~~~v~~~~Vd~~~~------------------------------- 106 (447)
..+..+|.|....|+||+++.+.. ..+.+.+-. .++|.|...+.--.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~-~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~ 106 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFID-KGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFE 106 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhcc-CCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 346789999999999999998875 455554422 23466666553100
Q ss_pred ----------------------------------------------hhhhhhCCCccccEEEEEeCCeeEEecCCCCHHH
Q 013240 107 ----------------------------------------------SRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (447)
Q Consensus 107 ----------------------------------------------~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~ 140 (447)
.++++++||.++|++++ +|+. +.|..+.+.
T Consensus 107 ~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~--~~G~~~~e~ 182 (202)
T 3gha_A 107 KQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV--IKNFADYDE 182 (202)
T ss_dssp HCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE--CSCTTCHHH
T ss_pred hCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE--ecCCCCHHH
Confidence 12445578999999987 7765 678889999
Q ss_pred HHHHHHHhcC
Q 013240 141 LVRYLKKFVA 150 (447)
Q Consensus 141 i~~fi~~~~~ 150 (447)
+.+.+.+.+.
T Consensus 183 l~~~i~~~~~ 192 (202)
T 3gha_A 183 IKETIEKELK 192 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876543
No 367
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.02 Score=50.16 Aligned_cols=87 Identities=16% Similarity=0.143 Sum_probs=64.3
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhhh
Q 013240 60 FDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRLA 110 (447)
Q Consensus 60 ~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l~ 110 (447)
.+++++.|| +.||+.|..-.+.|.+...+++..+ +.+..|+++. +.+++
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g--~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~va 129 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQG--AQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLS 129 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCC--ceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHH
Confidence 478899999 9999999999999999999998765 7777787653 24578
Q ss_pred hhCCCc------cccEEEEEeC-CeeE--E-e--cCCCCHHHHHHHHHHh
Q 013240 111 SKQEID------AFPTLKIFMH-GIPT--E-Y--YGPRKAELLVRYLKKF 148 (447)
Q Consensus 111 ~~~~i~------~~Ptl~~~~~-g~~~--~-y--~g~~~~~~i~~fi~~~ 148 (447)
+.||+- .+++.+++.+ |+.. . | .-.|+.+++.+-++-+
T Consensus 130 k~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 130 RDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 888873 3567777765 5432 1 2 2468888888776543
No 368
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=96.64 E-value=0.012 Score=52.11 Aligned_cols=83 Identities=6% Similarity=-0.042 Sum_probs=56.5
Q ss_pred CCeEEEEEECCC-Chhhh-----hhhHHHHHHHHHhhcCCCCeEEEEEeCc----------------------c-chhhh
Q 013240 60 FDYILVDFYAPW-CGHCK-----RLAPQLDEAAPILAKLKEPIVIAKVDAD----------------------K-YSRLA 110 (447)
Q Consensus 60 ~~~~lV~f~~~~-C~~C~-----~~~p~~~~~a~~l~~~~~~v~~~~Vd~~----------------------~-~~~l~ 110 (447)
.++++|.||..| |+.|. ...+.|.+. +. .+.+..|+++ . +.+++
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~----gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~va 120 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP----HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFH 120 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT----TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHH
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC----CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHH
Confidence 578999999888 99999 666666655 32 2566666653 1 35678
Q ss_pred hhCCCcc---------ccEEEEEe-CCeeEE------ecCCCCHHHHHHHHHHhc
Q 013240 111 SKQEIDA---------FPTLKIFM-HGIPTE------YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 111 ~~~~i~~---------~Ptl~~~~-~g~~~~------y~g~~~~~~i~~fi~~~~ 149 (447)
+.||+.. .|+.+++. +|+... +.+..+.+++.+.++...
T Consensus 121 k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 121 KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 8888875 69999986 565442 124466777777776554
No 369
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.61 E-value=0.00088 Score=57.98 Aligned_cols=42 Identities=14% Similarity=0.366 Sum_probs=33.4
Q ss_pred CeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeCcc
Q 013240 61 DYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADK 105 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~~~ 105 (447)
++.+|.|++.||+||+++.|.+ .++.+.+.+ ++.|..++..-
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ---GSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT---TCCEEEEECSS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCC---CCEEEEEechh
Confidence 6889999999999999999987 577665432 47788888753
No 370
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.0029 Score=50.76 Aligned_cols=70 Identities=13% Similarity=0.212 Sum_probs=46.3
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc---h---h-hhhhCCCccccEEEE
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---S---R-LASKQEIDAFPTLKI 123 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~---~---~-l~~~~~i~~~Ptl~~ 123 (447)
++|+++++.++ ++.|+.+||++|+++...+.+.. ..+ +.+..+|.+.. . + +.+..|...+|+++
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~----~~~--v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~If- 75 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEY----QFI--PNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLL- 75 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHE----EEE--SCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE-
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhc----ccC--CCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEE-
Confidence 56888887655 78899999999999988887731 111 33455555532 1 2 33445888999985
Q ss_pred EeCCeeE
Q 013240 124 FMHGIPT 130 (447)
Q Consensus 124 ~~~g~~~ 130 (447)
.+|+.+
T Consensus 76 -I~G~~I 81 (127)
T 3l4n_A 76 -VNGVSR 81 (127)
T ss_dssp -ETTEEC
T ss_pred -ECCEEE
Confidence 466543
No 371
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.49 E-value=0.024 Score=45.17 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=64.7
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccc----------------------hHhHHhhcCCCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ----------------------FADFADTFEANKKS 326 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~----------------------~~~~~~~~~i~~~~ 326 (447)
.++++++.|+. .....-......|.+++++++++.|+.|+... ..++++.+++ .
T Consensus 23 ~~k~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i---~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWT-PWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV---P 98 (136)
T ss_dssp TTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC---C
T ss_pred CCCEEEEEEEC-CcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCC---C
Confidence 45677777774 45566667778888899888888898888765 4667788888 6
Q ss_pred CCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 327 KLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 327 ~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
..|++++++.+++...+.+ ..+..+.+.+.++++.++
T Consensus 99 ~~P~~~lid~~G~i~~~~~---~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 99 WQPAFVFYRADGTSTFVNN---PTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSSEEEEECTTSCEEEECC---SSSCCCHHHHHHHHHHC-
T ss_pred CCCEEEEECCCCcEEEEEc---CCCccCHHHHHHHHHHHh
Confidence 7899999988764432320 113445778999988764
No 372
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.48 E-value=0.0015 Score=56.24 Aligned_cols=40 Identities=20% Similarity=0.279 Sum_probs=34.0
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~ 104 (447)
+++.+|.|++.||+||+++.|.+.++.+.+ + +.|..+...
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~----v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G----TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T----SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C----CeEEEEecc
Confidence 578999999999999999999999999877 3 556666654
No 373
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.33 E-value=0.0086 Score=43.57 Aligned_cols=80 Identities=9% Similarity=0.129 Sum_probs=56.0
Q ss_pred cEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCC
Q 013240 272 KIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESID 350 (447)
Q Consensus 272 ~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~ 350 (447)
+.++.|+. .....-......+++++++++ ++.|..+|.++.+++++.+|+ ...|++++ + ++. .+.|
T Consensus 4 ~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~-~--G~~-~~~G----- 70 (85)
T 1fo5_A 4 VKIELFTS-PMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGI---MAVPTIVI-N--GDV-EFIG----- 70 (85)
T ss_dssp EEEEEEEC-CCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTT---CCSSEEEE-T--TEE-ECCS-----
T ss_pred eEEEEEeC-CCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCC---cccCEEEE-C--CEE-eeec-----
Confidence 34455553 333333455667888888888 499999999988889999998 68999988 3 332 3333
Q ss_pred cccchhHHHHHHHHH
Q 013240 351 EEDQGSQISRFLEGY 365 (447)
Q Consensus 351 ~~~~~~~i~~Fl~~~ 365 (447)
..+.+.+.++++..
T Consensus 71 -~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 71 -APTKEALVEAIKKR 84 (85)
T ss_dssp -SSSSHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHh
Confidence 33567899998765
No 374
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.33 E-value=0.007 Score=48.95 Aligned_cols=88 Identities=13% Similarity=0.266 Sum_probs=62.1
Q ss_pred CccccChhhHHhhhcCCC--cEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CceEEEEeccchHhHHhhcCCCCCC---
Q 013240 254 LSVPINQDTLNLLKDDKR--KIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQFADFADTFEANKKS--- 326 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~~--~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~~~~~~~~~~i~~~~--- 326 (447)
.+..++.++++......+ ++++.|+.+ ....-......+.++++++. ++.|+.||+.+.+++++.+++ .
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a~-wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~~ 83 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFAN-WSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKV---STSP 83 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECCT-TCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTC---CCCS
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccC---cccC
Confidence 466788888876554333 677777643 33333455567788888876 499999999999999999998 4
Q ss_pred ---CCceEEEEeCCccceecCC
Q 013240 327 ---KLPKMVVWDGNENYLTVIG 345 (447)
Q Consensus 327 ---~~P~vvi~~~~~~y~~~~g 345 (447)
..|+++++...+....+.|
T Consensus 84 ~~~~~Pt~~~~~~G~~~~~~~G 105 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKEAMRRPQ 105 (137)
T ss_dssp SSSCSSEEEEESSSSEEEEESC
T ss_pred CcCCCCEEEEEECCEEEEEecC
Confidence 8999999965443333444
No 375
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.32 E-value=0.012 Score=46.76 Aligned_cols=91 Identities=7% Similarity=0.158 Sum_probs=60.9
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhCC-CceEEEEecc--chHhHHhhcCCCCCCCCceEEEEeCCcc-ce
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTL---KAAASANR-ELVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNEN-YL 341 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l---~~~a~~~~-~~~f~~vd~~--~~~~~~~~~~i~~~~~~P~vvi~~~~~~-y~ 341 (447)
.++++++.|+.. ....-......+ ..+++... ++.++.+|+. ....+++.+++ ...|++++++.+++ ..
T Consensus 26 ~~k~vlv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 26 EDKLLFVDCFTT-WCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGV---HAYPTLLFINSSGEVVY 101 (130)
T ss_dssp HSSCEEEEECCT-TCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTC---CSSCEEEEECTTSCEEE
T ss_pred cCCeEEEEEECC-CCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCC---CCCCEEEEECCCCcEEE
Confidence 456777777643 444444455555 44444433 3788889987 46889999999 77999999976543 22
Q ss_pred ecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 342 TVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 342 ~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
.+.| ..+.+.+.+|++..+.+.
T Consensus 102 ~~~G------~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 102 RLVG------AEDAPELLKKVKLGVESE 123 (130)
T ss_dssp EEES------CCCHHHHHHHHHHHHSCC
T ss_pred EecC------CCCHHHHHHHHHHHHHhc
Confidence 2333 345678999999987764
No 376
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.25 E-value=0.013 Score=47.22 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=67.4
Q ss_pred hhhHHhhhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEe-C
Q 013240 260 QDTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD-G 336 (447)
Q Consensus 260 ~~~~~~~~~~--~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~-~ 336 (447)
.+.+..+... ++++++.|+. .....-......+.++++.+ ++.|+.+|+++.+++++.+++ ...|+++++. .
T Consensus 28 ~~~~~~~l~~~~~k~vvv~F~a-~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~~ 102 (133)
T 3cxg_A 28 TGSLNQVFSSTQNSSIVIKFGA-VWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNI---KALPTFEFYFNL 102 (133)
T ss_dssp TTHHHHHHTC-CCSEEEEEEEC-TTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTC---CSSSEEEEEEEE
T ss_pred hhHHHHHHHhcCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCC---CCCCEEEEEEec
Confidence 4666655443 3466666664 45555566677788887776 589999999999999999999 7899999983 2
Q ss_pred Ccc---ceecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 337 NEN---YLTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 337 ~~~---y~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
++. ...+.| . +.+.|.++++.++..
T Consensus 103 ~g~g~~~~~~~G------~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 103 NNEWVLVHTVEG------A-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp TTEEEEEEEEES------C-CHHHHHHHHHHHSEE
T ss_pred CCCeEEEEEEcC------C-CHHHHHHHHHHHHHh
Confidence 222 222332 2 467899999888653
No 377
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.24 E-value=0.011 Score=50.27 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=37.6
Q ss_pred hHHHhHccCCeEEEEEECCCChhhhh-hhHHHHHHHHHhhcCCCCe-EEEEEeCc
Q 013240 52 NFDSAISSFDYILVDFYAPWCGHCKR-LAPQLDEAAPILAKLKEPI-VIAKVDAD 104 (447)
Q Consensus 52 ~f~~~~~~~~~~lV~f~~~~C~~C~~-~~p~~~~~a~~l~~~~~~v-~~~~Vd~~ 104 (447)
++.+++.....+|+.|++.||+.|.. -.|.|.+.+++++..+ + .+..|.++
T Consensus 40 sLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g--~d~VigIS~D 92 (176)
T 4f82_A 40 SVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG--IDEIWCVSVN 92 (176)
T ss_dssp EHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESS
T ss_pred eHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC--CCEEEEEeCC
Confidence 35565555444555666999999999 9999999999998765 5 56666665
No 378
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.22 E-value=0.043 Score=43.55 Aligned_cols=89 Identities=16% Similarity=0.093 Sum_probs=63.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccc-----------------------hHhHHhhcCCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKK 325 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~-----------------------~~~~~~~~~i~~~ 325 (447)
.++++++.|+. .....-......|.+++++++++.|+.++... ...+++.+|+
T Consensus 24 ~~k~~ll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i--- 99 (136)
T 1zzo_A 24 LGKPAVLWFWA-PWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV--- 99 (136)
T ss_dssp TTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC---
T ss_pred CCCeEEEEEEc-CCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC---
Confidence 45677777774 45566677778888998888888888888743 3556777887
Q ss_pred CCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 326 SKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 326 ~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
...|++++++.+++...+.| ..+.+.+.++++.++.
T Consensus 100 ~~~P~~~~id~~g~i~~~~g------~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 100 TQQPAYAFVDPHGNVDVVRG------RMSQDELTRRVTALTS 135 (136)
T ss_dssp CSSSEEEEECTTCCEEEEES------CCCHHHHHHHHHHHC-
T ss_pred CCCceEEEECCCCCEEEEec------CCCHHHHHHHHHHHhc
Confidence 67899999998764433332 3456789998887653
No 379
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.11 E-value=0.011 Score=43.07 Aligned_cols=67 Identities=9% Similarity=0.115 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhCC-CceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHH
Q 013240 287 QKLVTTLKAAASANR-ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 287 ~~~~~~l~~~a~~~~-~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
......+.+++++++ ++.|..+|.++.+++++.+|+ ...|++++ +++ . .+.| ..+.+.+.+++++.
T Consensus 17 ~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~-~G~--~-~~~G------~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 17 PMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGL---MAVPAIAI-NGV--V-RFVG------APSREELFEAINDE 83 (85)
T ss_dssp TTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCS---SCSSEEEE-TTT--E-EEEC------SSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCc---eeeCEEEE-CCE--E-EEcc------CCCHHHHHHHHHHH
Confidence 445567788888887 499999999988999999999 68999988 332 2 2333 23467899999876
Q ss_pred h
Q 013240 366 R 366 (447)
Q Consensus 366 ~ 366 (447)
+
T Consensus 84 l 84 (85)
T 1nho_A 84 M 84 (85)
T ss_dssp C
T ss_pred h
Confidence 5
No 380
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.09 E-value=0.057 Score=43.57 Aligned_cols=90 Identities=10% Similarity=0.123 Sum_probs=64.2
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEecc---------------------------chHhHHhhc
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK---------------------------QFADFADTF 320 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~---------------------------~~~~~~~~~ 320 (447)
.++++++.|+. .....-......|.++++++++ +.|+.++.. ...++++.+
T Consensus 28 ~gk~~lv~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 28 GEKPTLIHFWS-ISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp TTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEc-CCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 45677777775 4555566777888888888776 888888743 345688888
Q ss_pred CCCCCCCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 321 EANKKSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 321 ~i~~~~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
|+ ...|++++++.+++.. .+.| ..+.+.+.++++.+++.
T Consensus 107 ~v---~~~P~~~lid~~G~i~~~~~g------~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 107 EN---EYVPAYYVFDKTGQLRHFQAG------GSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp CC---CCSSEEEEECTTCBEEEEEES------CSTTHHHHHHHHHHHTT
T ss_pred CC---CCCCEEEEECCCCcEEEEecC------CCCHHHHHHHHHHHHhc
Confidence 88 6799999998865332 2333 23567899999988765
No 381
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.06 E-value=0.0046 Score=50.10 Aligned_cols=68 Identities=21% Similarity=0.328 Sum_probs=45.7
Q ss_pred hhhHHHhHccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhh----hCCCccccE
Q 013240 50 ESNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLAS----KQEIDAFPT 120 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~~-----~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~----~~~i~~~Pt 120 (447)
.+.++++++.++ +.| |+. |||++|++....+.+. + +.+..+|.+.++++.+ ..|..++|.
T Consensus 25 ~~~v~~~i~~~~-Vvv-y~ks~~~~~~Cp~C~~ak~~L~~~-------g--v~y~~vdI~~d~~~~~~L~~~~G~~tvP~ 93 (135)
T 2wci_A 25 IEKIQRQIAENP-ILL-YMKGSPKLPSCGFSAQAVQALAAC-------G--ERFAYVDILQNPDIRAELPKYANWPTFPQ 93 (135)
T ss_dssp HHHHHHHHHHCS-EEE-EESBCSSSBSSHHHHHHHHHHHTT-------C--SCCEEEEGGGCHHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHHhccCC-EEE-EEEecCCCCCCccHHHHHHHHHHc-------C--CceEEEECCCCHHHHHHHHHHHCCCCcCE
Confidence 355666776544 444 555 9999999987777542 2 5678888887765544 357888998
Q ss_pred EEEEeCCeeE
Q 013240 121 LKIFMHGIPT 130 (447)
Q Consensus 121 l~~~~~g~~~ 130 (447)
+ |.+|+.+
T Consensus 94 V--fI~G~~i 101 (135)
T 2wci_A 94 L--WVDGELV 101 (135)
T ss_dssp E--EETTEEE
T ss_pred E--EECCEEE
Confidence 6 4577654
No 382
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=95.84 E-value=0.024 Score=50.79 Aligned_cols=59 Identities=12% Similarity=0.215 Sum_probs=43.6
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccch---hhhhhCCCccccEEEEEeCCeeE
Q 013240 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS---RLASKQEIDAFPTLKIFMHGIPT 130 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~---~l~~~~~i~~~Ptl~~~~~g~~~ 130 (447)
...++.|+.+||++|++....+++. + +.+-.+|.+.++ ++.+.+|..++|+++ .+|+.+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-----~----i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~~i 230 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-----G----LSFEEIILGHDATIVSVRAVSGRTTVPQVF--IGGKHI 230 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-----T----CCCEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTEEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-----C----CceEEEECCCchHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 4557788999999999998877752 2 455667776554 477789999999985 466543
No 383
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=95.84 E-value=0.037 Score=54.48 Aligned_cols=113 Identities=8% Similarity=0.113 Sum_probs=78.5
Q ss_pred CccccChhhHHhhhcCC--CcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---------CceEEEEeccchHhHHhhcCC
Q 013240 254 LSVPINQDTLNLLKDDK--RKIVLAIVEDETEEKSQKLVTTLKAAASANR---------ELVFCYVGIKQFADFADTFEA 322 (447)
Q Consensus 254 ~~~~l~~~~~~~~~~~~--~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~---------~~~f~~vd~~~~~~~~~~~~i 322 (447)
.+..++..+|+.+.... +++++.|+. .....-..+...+.++++.+. ++.|+.||+++.+++++.+++
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA-~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V 102 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYN-DGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDI 102 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEEC-TTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTC
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCC
Confidence 45677888888765433 567777775 356666788889999999886 389999999999999999999
Q ss_pred CCCCCCceEEEEeCCc--cceecCCCCCCC------cccchhHHHHHHHHHhcCcc
Q 013240 323 NKKSKLPKMVVWDGNE--NYLTVIGSESID------EEDQGSQISRFLEGYREGRT 370 (447)
Q Consensus 323 ~~~~~~P~vvi~~~~~--~y~~~~g~~~~~------~~~~~~~i~~Fl~~~~~gkl 370 (447)
..+|++++++.++ ....+.|....+ ..+..+.+...++.+++.++
T Consensus 103 ---~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~~ 155 (470)
T 3qcp_A 103 ---NFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKHM 155 (470)
T ss_dssp ---CSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHHC
T ss_pred ---CccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhcc
Confidence 7899999997542 222334433221 22455666666666654443
No 384
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=95.64 E-value=0.092 Score=43.33 Aligned_cols=93 Identities=6% Similarity=0.130 Sum_probs=61.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccchHhHHhhc--------------------------
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTF-------------------------- 320 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~~~~~~-------------------------- 320 (447)
.++++++.|+. .....-......|.++++++++ +.|+.|+.+..++.++.+
T Consensus 33 ~gk~vlv~f~~-~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3or5_A 33 KGKAYIVNFFA-TWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYID 111 (165)
T ss_dssp TTCEEEEEEEC-TTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTST
T ss_pred CCCEEEEEEEc-CcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhc
Confidence 44677777764 4555566777888888888765 888888876544433333
Q ss_pred -CCCCCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 321 -EANKKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 321 -~i~~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
++ ...|++++++.+++. ..+. +..+.+.+.++|+.++.....
T Consensus 112 ~~i---~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 112 GGI---TGIPTSFVIDASGNVSGVIV------GPRSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp TCS---CSSSEEEEECTTSBEEEEEC------SCCCHHHHHHHHHHHHC----
T ss_pred cCC---CCCCeEEEECCCCcEEEEEc------CCCCHHHHHHHHHHHHhhhcc
Confidence 45 678999999987643 2332 334578999999999875543
No 385
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=95.64 E-value=0.035 Score=49.25 Aligned_cols=42 Identities=7% Similarity=0.199 Sum_probs=29.4
Q ss_pred CCeEEEEEECCCChhhhhhhHH-HHHHHHHhhcCCCCeEEEEEe
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQ-LDEAAPILAKLKEPIVIAKVD 102 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~-~~~~a~~l~~~~~~v~~~~Vd 102 (447)
.+..++.|....|++|+++.|. +.++.+.+-. .++|.+...+
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~-~g~V~~v~~~ 81 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYID-TGKMLYIFRH 81 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTT-TTSEEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHccc-CCeEEEEEEe
Confidence 4678999999999999999986 4667655522 1235555444
No 386
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=95.59 E-value=0.2 Score=40.70 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=62.3
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccc------------------------hHhHHhhcCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ------------------------FADFADTFEA 322 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~------------------------~~~~~~~~~i 322 (447)
.++++++.|+. .....-......|.++++++++ +.++.|+.+. ...+++.||.
T Consensus 23 ~gk~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWA-TWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEEC-TTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEc-CcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 34667776664 3455556667778888888753 7787777642 2345566662
Q ss_pred CCCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 323 NKKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 323 ~~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
.....|++++++.+++. ..+ .+..+.+.+.++|+.+..++-..
T Consensus 102 -~v~~~P~~~lid~~G~i~~~~------~g~~~~~~l~~~l~~l~~~~~~~ 145 (151)
T 3raz_A 102 -TVGVLPFTVVEAPKCGYRQTI------TGEVNEKSLTDAVKLAHSKCREG 145 (151)
T ss_dssp -CSCCSSEEEEEETTTTEEEEC------CSCCCHHHHHHHHHHHHTC----
T ss_pred -ccCCCCEEEEECCCCcEEEEE------CCCCCHHHHHHHHHHHHHHhhcc
Confidence 13679999999987643 223 23456789999999998886443
No 387
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=95.56 E-value=0.015 Score=42.95 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=39.4
Q ss_pred EEEEECC----CChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc-----cch----hhhhhCCCc-----cccEEEEEe
Q 013240 64 LVDFYAP----WCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-----KYS----RLASKQEID-----AFPTLKIFM 125 (447)
Q Consensus 64 lV~f~~~----~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-----~~~----~l~~~~~i~-----~~Ptl~~~~ 125 (447)
++.|+.+ ||++|+++...+++. + +.+-.+|.+ .++ ++.+..|.. ++|++++ .
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-----g----i~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~ 71 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-----K----QPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-P 71 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-----T----CCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-T
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-----C----CCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-E
Confidence 4667899 999999887776652 2 556777777 553 356667887 8998764 2
Q ss_pred CCeeE
Q 013240 126 HGIPT 130 (447)
Q Consensus 126 ~g~~~ 130 (447)
+|+.+
T Consensus 72 ~g~~i 76 (87)
T 1aba_A 72 DGSHI 76 (87)
T ss_dssp TSCEE
T ss_pred CCEEE
Confidence 56543
No 388
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=95.46 E-value=0.08 Score=43.09 Aligned_cols=93 Identities=9% Similarity=0.129 Sum_probs=59.1
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccchH-----------------------hHHhhcCCCC
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA-----------------------DFADTFEANK 324 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~-----------------------~~~~~~~i~~ 324 (447)
++++++.|+. .....-......|.++++++++ +.|+.|+.+... ++.+.+++
T Consensus 30 gk~~lv~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 106 (152)
T 2lja_A 30 GKYIYIDVWA-TWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI-- 106 (152)
T ss_dssp TSEEEEEECC-SSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC--
T ss_pred CCEEEEEEEC-CcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc--
Confidence 3566665553 2333334445566667777654 777777665432 57777888
Q ss_pred CCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 325 KSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 325 ~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
...|++++++.+++..... .+..+.+.+.++|+.+.++.-+
T Consensus 107 -~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 107 -NGIPRFILLDRDGKIISAN-----MTRPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp -CSSCCEEEECTTSCEEESS-----CCCTTCHHHHHHHHHHHTCCSS
T ss_pred -CCCCEEEEECCCCeEEEcc-----CCCCCHHHHHHHHHHHhccccc
Confidence 6789999999865332211 2334567999999999887643
No 389
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=95.45 E-value=0.015 Score=45.13 Aligned_cols=67 Identities=18% Similarity=0.350 Sum_probs=43.9
Q ss_pred hhHHHhHccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhh----hhCCCccccEE
Q 013240 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLA----SKQEIDAFPTL 121 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~-----~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~----~~~~i~~~Ptl 121 (447)
+.++++++.++ ++ .|.. |||++|++....+.+. + +.+-.+|.+.+++.. +..|...+|.+
T Consensus 9 ~~v~~~i~~~~-Vv-vy~k~t~~~p~Cp~C~~ak~~L~~~-----g----i~~~~~dI~~~~~~~~~l~~~~g~~tvP~i 77 (109)
T 3ipz_A 9 DTLEKLVNSEK-VV-LFMKGTRDFPMCGFSNTVVQILKNL-----N----VPFEDVNILENEMLRQGLKEYSNWPTFPQL 77 (109)
T ss_dssp HHHHHHHTSSS-EE-EEESBCSSSBSSHHHHHHHHHHHHT-----T----CCCEEEEGGGCHHHHHHHHHHHTCSSSCEE
T ss_pred HHHHHHHccCC-EE-EEEecCCCCCCChhHHHHHHHHHHc-----C----CCcEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 34566776654 33 3444 5999999998777763 2 556778887665543 33478899976
Q ss_pred EEEeCCeeE
Q 013240 122 KIFMHGIPT 130 (447)
Q Consensus 122 ~~~~~g~~~ 130 (447)
|.+|+.+
T Consensus 78 --fi~g~~i 84 (109)
T 3ipz_A 78 --YIGGEFF 84 (109)
T ss_dssp --EETTEEE
T ss_pred --EECCEEE
Confidence 4577544
No 390
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=95.41 E-value=0.12 Score=42.67 Aligned_cols=89 Identities=12% Similarity=0.203 Sum_probs=61.3
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEecc------------------ch-----------------
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK------------------QF----------------- 313 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~------------------~~----------------- 313 (447)
.++++++.|+. .....-......|.+++++++++.|+.|+.. ..
T Consensus 36 ~gk~~lv~F~~-~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMA-AWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEEC-TTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEEC-CCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 44677777774 3455556677788888888888888888765 22
Q ss_pred -----HhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCccc-chhHHHHHHHHHhcC
Q 013240 314 -----ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEED-QGSQISRFLEGYREG 368 (447)
Q Consensus 314 -----~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~-~~~~i~~Fl~~~~~g 368 (447)
.++.+.|++ ...|++++++.+++... .| .. +.+.+.++++.++.|
T Consensus 115 ~~~d~~~~~~~~~v---~~~P~~~lid~~G~i~~-~g------~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 115 MVMDDGSLVEKFNV---RSIDYIVIMDKSSNVLY-AG------TTPSLGELESVIKSVQGG 165 (165)
T ss_dssp EEECCSHHHHHTTC---CSSSEEEEEETTCCEEE-EE------ESCCHHHHHHHHHHC---
T ss_pred EEeChHHHHHHhCC---CCceEEEEEcCCCcEEE-eC------CCCCHHHHHHHHHHHhcC
Confidence 256677777 67899999998765544 32 23 577899999887765
No 391
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.38 E-value=0.18 Score=50.74 Aligned_cols=135 Identities=13% Similarity=0.106 Sum_probs=92.7
Q ss_pred CCCeEEEEcCCCCCcccccCCCChHHHHHHHHhh--CCCCccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHH
Q 013240 217 KVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN--FLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLK 294 (447)
Q Consensus 217 ~~P~l~~~~~~~~~~~~~~g~~~~~~i~~fI~~~--~~p~~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~ 294 (447)
..|++.+.+++......|.|--...++..|+..- .-..-..++++.++.+.....+..+.+|.......-......+.
T Consensus 61 ~~p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~ 140 (521)
T 1hyu_A 61 RKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALN 140 (521)
T ss_dssp CSSEEEEECTTCCCSCEEESCCCGGGHHHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHH
T ss_pred CCCEEEEecCCCcceEEEeccCcchhHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHH
Confidence 4599999887655567788755555566666442 11122567888888886555555555554456666677788899
Q ss_pred HHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHH
Q 013240 295 AAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 364 (447)
Q Consensus 295 ~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~ 364 (447)
+++..++++.|..+|...++++++.+++ ...|++++ +.+. ...| ..+.+.|.+|+..
T Consensus 141 ~~a~~~~~v~~~~vd~~~~~~~~~~~~i---~svPt~~i-~g~~---~~~G------~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 141 LMAVLNPRIKHTAIDGGTFQNEITERNV---MGVPAVFV-NGKE---FGQG------RMTLTEIVAKVDT 197 (521)
T ss_dssp HHHHHCTTEEEEEEETTTCHHHHHHTTC---CSSSEEEE-TTEE---EEES------CCCHHHHHHHHCC
T ss_pred HHHhHcCceEEEEEechhhHHHHHHhCC---CccCEEEE-CCEE---EecC------CCCHHHHHHHHhh
Confidence 9999998899999999999999999999 78999977 4321 1112 2345567777644
No 392
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=95.37 E-value=0.095 Score=42.03 Aligned_cols=84 Identities=11% Similarity=0.152 Sum_probs=59.5
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CceEEEEeccc-------------------------hHhHHhhcC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQ-------------------------FADFADTFE 321 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~-------------------------~~~~~~~~~ 321 (447)
.++++++.|+. .....-......|.+++++++ ++.|+.++... ...+++.++
T Consensus 33 ~gk~~ll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWT-SWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEEC-SSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 45677777774 455666677788999999987 48888887743 356788888
Q ss_pred CCCCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHH
Q 013240 322 ANKKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFL 362 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl 362 (447)
+ ...|++++++.+++. ..+. +..+.+.+.++|
T Consensus 112 v---~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~l 144 (145)
T 3erw_A 112 I---ITIPTSFLLNEKGEIEKTKI------GPMTAEQLKEWT 144 (145)
T ss_dssp C---CEESEEEEECTTCCEEEEEE------SCCCHHHHHHHH
T ss_pred c---CccCeEEEEcCCCcEEEEEc------CCcCHHHHHHhh
Confidence 8 678999999987543 2232 334566777776
No 393
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=95.37 E-value=0.027 Score=44.60 Aligned_cols=66 Identities=21% Similarity=0.225 Sum_probs=43.6
Q ss_pred hHHHhHccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCCeE---EEEEeCccchhh----hhhCCCcccc
Q 013240 52 NFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIV---IAKVDADKYSRL----ASKQEIDAFP 119 (447)
Q Consensus 52 ~f~~~~~~~~~~lV~f~~-----~~C~~C~~~~p~~~~~a~~l~~~~~~v~---~~~Vd~~~~~~l----~~~~~i~~~P 119 (447)
-++++++.++. |.|.. |||++|++....+.+. + +. +..+|.+.++++ .+..|...+|
T Consensus 8 ~v~~~i~~~~V--vvfsk~t~~~p~Cp~C~~ak~lL~~~-----g----v~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP 76 (121)
T 3gx8_A 8 AIEDAIESAPV--VLFMKGTPEFPKCGFSRATIGLLGNQ-----G----VDPAKFAAYNVLEDPELREGIKEFSEWPTIP 76 (121)
T ss_dssp HHHHHHHSCSE--EEEESBCSSSBCTTHHHHHHHHHHHH-----T----BCGGGEEEEECTTCHHHHHHHHHHHTCCSSC
T ss_pred HHHHHhccCCE--EEEEeccCCCCCCccHHHHHHHHHHc-----C----CCcceEEEEEecCCHHHHHHHHHHhCCCCCC
Confidence 45667776553 33443 5999999998888774 2 43 667787766554 3345778899
Q ss_pred EEEEEeCCeeE
Q 013240 120 TLKIFMHGIPT 130 (447)
Q Consensus 120 tl~~~~~g~~~ 130 (447)
.++ .+|+.+
T Consensus 77 ~vf--I~g~~i 85 (121)
T 3gx8_A 77 QLY--VNKEFI 85 (121)
T ss_dssp EEE--ETTEEE
T ss_pred eEE--ECCEEE
Confidence 974 477544
No 394
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.35 E-value=0.027 Score=42.18 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=38.6
Q ss_pred EEEEECCCChhh------hhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCC--CccccEEEEEeCCeeE
Q 013240 64 LVDFYAPWCGHC------KRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQE--IDAFPTLKIFMHGIPT 130 (447)
Q Consensus 64 lV~f~~~~C~~C------~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~~--i~~~Ptl~~~~~g~~~ 130 (447)
++.|+++||++| +++...+++ .+ +.+-.+|.+.+++ +.+..| ...+|.++ .+|+.+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~-------~~--i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if--i~g~~i 71 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG-------KR--IQYQLVDISQDNALRDEMRTLAGNPKATPPQIV--NGNHYC 71 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH-------TT--CCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE--ETTEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH-------CC--CceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE--ECCEEE
Confidence 677899999999 566554442 22 6678888877643 444677 77999874 466544
No 395
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=95.28 E-value=0.14 Score=47.98 Aligned_cols=103 Identities=11% Similarity=0.100 Sum_probs=69.4
Q ss_pred cccccccCCCCeEEeChhhHHHhHccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc--------
Q 013240 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-------- 104 (447)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~~~~~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~-------- 104 (447)
++-.+...++..+.|++- ..+++++.|| +.||+.|..-.+.|.+. + ...+.+..|+++
T Consensus 5 p~F~l~~~~G~~~~Lsd~-------~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~--~~~~~v~gis~D~~~~~~~f 71 (322)
T 4eo3_A 5 KHFELLTDEGKTFTHVDL-------YGKYTILFFFPKAGTSGSTREAVEFSRE----N--FEKAQVVGISRDSVEALKRF 71 (322)
T ss_dssp CCCEEEETTSCEEEGGGT-------TTSEEEEEECSSTTSHHHHHHHHHHHHS----C--CTTEEEEEEESCCHHHHHHH
T ss_pred CCcEEECCCcCEEeHHHh-------CCCeEEEEEECCCCCCCCHHHHHHHHHH----h--hCCCEEEEEeCCCHHHHHHH
Confidence 344455666777776542 3578999999 67999998877776531 1 123677777764
Q ss_pred -------------cchhhhhhCCCc----cccEEEEEe-CCeeEE-ecC---CCCHHHHHHHHHHhc
Q 013240 105 -------------KYSRLASKQEID----AFPTLKIFM-HGIPTE-YYG---PRKAELLVRYLKKFV 149 (447)
Q Consensus 105 -------------~~~~l~~~~~i~----~~Ptl~~~~-~g~~~~-y~g---~~~~~~i~~fi~~~~ 149 (447)
.+.++++.||+. .+|+.+++. +|+... |.+ ....+++.++++++.
T Consensus 72 ~~~~~l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 72 KEKNDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp HHHHTCCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred HHhhCCceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 234688889984 467877775 476553 544 456799999998875
No 396
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=95.26 E-value=0.098 Score=43.07 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=59.8
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhC-CCceEEEEeccch-----------HhHHhhcCCCCCCCCceEEE
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTL---KAAASAN-RELVFCYVGIKQF-----------ADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l---~~~a~~~-~~~~f~~vd~~~~-----------~~~~~~~~i~~~~~~P~vvi 333 (447)
.++++++.|+.......-......+ .++++.. .++.++.+|.... .++++.|++ ...|++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v---~~~Pt~~~ 122 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKV---TGFPELVF 122 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTC---CSSSEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCC---CCCCEEEE
Confidence 4577777776234555445555555 4554443 3488999998654 378889999 67999999
Q ss_pred EeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 334 WDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 334 ~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
++.+++. ... |.. ..+.+.+.++++.++..
T Consensus 123 ~d~~G~~~~~~-G~~----~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 123 IDAEGKQLARM-GFE----PGGGAAYVSKVKSALKL 153 (154)
T ss_dssp ECTTCCEEEEE-CCC----TTCHHHHHHHHHHHHTC
T ss_pred EcCCCCEEEEe-cCC----CCCHHHHHHHHHHHHhc
Confidence 9876532 223 432 12467888999887653
No 397
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.25 E-value=0.12 Score=42.22 Aligned_cols=89 Identities=11% Similarity=0.023 Sum_probs=64.2
Q ss_pred CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEec---------------------------cchHhHHhhcCCC
Q 013240 271 RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI---------------------------KQFADFADTFEAN 323 (447)
Q Consensus 271 ~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~---------------------------~~~~~~~~~~~i~ 323 (447)
+++++.|+. .....-......|.++++++ ++.|+.|+. .....+++.||+
T Consensus 31 k~vll~f~~-~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v- 107 (154)
T 3ia1_A 31 KPAVIVFWA-SWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV- 107 (154)
T ss_dssp SSEEEEEEC-TTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB-
T ss_pred CeEEEEEEc-ccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC-
Confidence 677777774 35555566777788888888 888888887 355677888888
Q ss_pred CCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCcc
Q 013240 324 KKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGRT 370 (447)
Q Consensus 324 ~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl 370 (447)
...|++++++.+++. .... +..+.+.+.++|++...+.-
T Consensus 108 --~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 108 --LGQPWTFVVDREGKVVALFA------GRAGREALLDALLLAGADLE 147 (154)
T ss_dssp --CSSCEEEEECTTSEEEEEEE------SBCCHHHHHHHHHHTTCCC-
T ss_pred --CcccEEEEECCCCCEEEEEc------CCCCHHHHHHHHHhccCccc
Confidence 689999999987632 2232 34567899999999877753
No 398
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.23 E-value=0.026 Score=43.92 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=38.5
Q ss_pred EEEEEECCCChhhh------hhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhC--------CCccccEEEEE
Q 013240 63 ILVDFYAPWCGHCK------RLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQ--------EIDAFPTLKIF 124 (447)
Q Consensus 63 ~lV~f~~~~C~~C~------~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~--------~i~~~Ptl~~~ 124 (447)
-++.|+.+||++|+ ++...+++ .+ |.+-.+|.+.+++ +.+.+ |...+|.++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~-------~g--i~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf-- 77 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA-------NK--IEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF-- 77 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH-------TT--CCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE--
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH-------cC--CCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE--
Confidence 36778899999998 45444432 22 6788899987754 34444 677889874
Q ss_pred eCCeeE
Q 013240 125 MHGIPT 130 (447)
Q Consensus 125 ~~g~~~ 130 (447)
.+|+.+
T Consensus 78 i~g~~i 83 (111)
T 2ct6_A 78 NGDRYC 83 (111)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 466544
No 399
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=95.23 E-value=0.015 Score=45.24 Aligned_cols=67 Identities=16% Similarity=0.256 Sum_probs=45.2
Q ss_pred hhHHHhHccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhh----hCCCccccEE
Q 013240 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLAS----KQEIDAFPTL 121 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~-----~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~----~~~i~~~Ptl 121 (447)
+-.++++++++ +|.|.. +||++|++....+.+. + +.+..+|.+.+++..+ ..|...+|.+
T Consensus 7 ~~v~~~i~~~~--Vvlf~kg~~~~~~Cp~C~~ak~~L~~~-----g----i~y~~~di~~d~~~~~~l~~~~g~~tvP~i 75 (111)
T 3zyw_A 7 LRLKKLTHAAP--CMLFMKGTPQEPRCGFSKQMVEILHKH-----N----IQFSSFDIFSDEEVRQGLKAYSSWPTYPQL 75 (111)
T ss_dssp HHHHHHHTSSS--EEEEESBCSSSBSSHHHHHHHHHHHHT-----T----CCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHhcCC--EEEEEecCCCCCcchhHHHHHHHHHHc-----C----CCeEEEECcCCHHHHHHHHHHHCCCCCCEE
Confidence 34556666543 456777 9999999998777652 2 5567788877765533 3477889997
Q ss_pred EEEeCCeeE
Q 013240 122 KIFMHGIPT 130 (447)
Q Consensus 122 ~~~~~g~~~ 130 (447)
+ .+|+.+
T Consensus 76 f--i~g~~i 82 (111)
T 3zyw_A 76 Y--VSGELI 82 (111)
T ss_dssp E--ETTEEE
T ss_pred E--ECCEEE
Confidence 5 467544
No 400
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=95.22 E-value=0.16 Score=44.55 Aligned_cols=87 Identities=16% Similarity=0.235 Sum_probs=62.3
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhhh
Q 013240 60 FDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRLA 110 (447)
Q Consensus 60 ~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~----------------------------~~~l~ 110 (447)
.+++++.|| +.||+.|..-...|.+...+++..+ +.+..|+++. +.++|
T Consensus 56 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g--~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va 133 (219)
T 3tue_A 56 GKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELN--CEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIA 133 (219)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCEEEEEEecccCCCCCchhHhhHHHHHhhhccCC--cEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHH
Confidence 478889999 8999999999999999999998765 7777777753 34578
Q ss_pred hhCCCc----c--ccEEEEEeC-CeeEE---e--cCCCCHHHHHHHHHHh
Q 013240 111 SKQEID----A--FPTLKIFMH-GIPTE---Y--YGPRKAELLVRYLKKF 148 (447)
Q Consensus 111 ~~~~i~----~--~Ptl~~~~~-g~~~~---y--~g~~~~~~i~~fi~~~ 148 (447)
+.||+- + +-..+++.. |+... | .-.|+.+++.+.++.+
T Consensus 134 ~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 134 RSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 888874 2 234555544 54332 2 2367888887776554
No 401
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=95.19 E-value=0.11 Score=42.13 Aligned_cols=94 Identities=15% Similarity=0.183 Sum_probs=62.5
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccc----------------------hHhHHhhcCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ----------------------FADFADTFEANK 324 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~----------------------~~~~~~~~~i~~ 324 (447)
.++++++.|+. .....-......|.++++++++ +.|+.|+... ...+++.+++
T Consensus 25 ~gk~vlv~F~~-~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 101 (151)
T 2f9s_A 25 KGKGVFLNFWG-TWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDV-- 101 (151)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTC--
T ss_pred CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCC--
Confidence 34677777764 4555556667778888777653 7788877643 2367778888
Q ss_pred CCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 325 KSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 325 ~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
...|++++++.+++. ..+.| ..+.+.+.++++.++.+.-.+
T Consensus 102 -~~~P~~~lid~~G~i~~~~~G------~~~~~~l~~~l~~ll~~~~~~ 143 (151)
T 2f9s_A 102 -SPLPTTFLINPEGKVVKVVTG------TMTESMIHDYMNLIKPGETSG 143 (151)
T ss_dssp -CSSCEEEEECTTSEEEEEEES------CCCHHHHHHHHHHHSCC----
T ss_pred -CCCCeEEEECCCCcEEEEEeC------CCCHHHHHHHHHHHHhhhhcc
Confidence 678999999886533 22322 345779999999998876443
No 402
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=95.06 E-value=0.16 Score=41.24 Aligned_cols=94 Identities=9% Similarity=0.075 Sum_probs=61.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEec-----------------------cchHhHHhhcCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGI-----------------------KQFADFADTFEAN 323 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~-----------------------~~~~~~~~~~~i~ 323 (447)
.++++++.|+. .....-......|.++++++++ +.+..++. .....+++.+|+
T Consensus 27 ~gk~~lv~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i- 104 (153)
T 2l5o_A 27 QGKVTLINFWF-PSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT- 104 (153)
T ss_dssp TTCEEEEEEEC-TTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC-
T ss_pred CCCEEEEEEEC-CCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC-
Confidence 34566666664 3444445566667777776653 66655542 234567888888
Q ss_pred CCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 324 KKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 324 ~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
...|++++++.+++. ..+.| ..+.+.+.++|+.++.+.-.+
T Consensus 105 --~~~P~~~lid~~G~i~~~~~g------~~~~~~l~~~l~~ll~~~~~~ 146 (153)
T 2l5o_A 105 --QVYPTSVLIGKKGEILKTYVG------EPDFGKLYQEIDTAWRNSDAE 146 (153)
T ss_dssp --CSSSEEEEECSSSCCCEEEES------SCCHHHHHHHHHHHHHCCSSC
T ss_pred --CccCeEEEECCCCcEEEEEcC------CCCHHHHHHHHHHHHHhhhhc
Confidence 678999999886533 22332 345779999999999987655
No 403
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=95.04 E-value=0.17 Score=42.42 Aligned_cols=82 Identities=13% Similarity=0.078 Sum_probs=57.7
Q ss_pred ccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeC
Q 013240 257 PINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 336 (447)
Q Consensus 257 ~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~ 336 (447)
.++...+..+...+.+.+++.|-..-...-......|.+++..++++.|..+|.++.++.+..|+-+.....|++++++.
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~ 119 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDE 119 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECT
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECC
Confidence 34555555554433344434444456677778888999999998889999999988888888776212378999999998
Q ss_pred Cc
Q 013240 337 NE 338 (447)
Q Consensus 337 ~~ 338 (447)
++
T Consensus 120 ~G 121 (167)
T 1z6n_A 120 EF 121 (167)
T ss_dssp TC
T ss_pred CC
Confidence 63
No 404
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=94.93 E-value=0.033 Score=43.87 Aligned_cols=67 Identities=16% Similarity=0.281 Sum_probs=44.0
Q ss_pred hhHHHhHccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCCeE-EEEEeCccchhhhh----hCCCccccE
Q 013240 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIV-IAKVDADKYSRLAS----KQEIDAFPT 120 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~-----~~C~~C~~~~p~~~~~a~~l~~~~~~v~-~~~Vd~~~~~~l~~----~~~i~~~Pt 120 (447)
+..++++++++ +|.|.. |||++|++....+.+. + +. +..+|.+.++++.+ ..|...+|.
T Consensus 11 ~~v~~~i~~~~--Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-----g----v~~~~~vdV~~d~~~~~~l~~~tg~~tvP~ 79 (118)
T 2wem_A 11 EQLDALVKKDK--VVVFLKGTPEQPQCGFSNAVVQILRLH-----G----VRDYAAYNVLDDPELRQGIKDYSNWPTIPQ 79 (118)
T ss_dssp HHHHHHHHHSS--EEEEESBCSSSBSSHHHHHHHHHHHHT-----T----CCCCEEEESSSCHHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhccCC--EEEEEecCCCCCccHHHHHHHHHHHHc-----C----CCCCEEEEcCCCHHHHHHHHHHhCCCCcCe
Confidence 45667777654 334555 5999999988777652 2 53 66778777655433 347888999
Q ss_pred EEEEeCCeeE
Q 013240 121 LKIFMHGIPT 130 (447)
Q Consensus 121 l~~~~~g~~~ 130 (447)
+ |.+|+.+
T Consensus 80 v--fI~g~~I 87 (118)
T 2wem_A 80 V--YLNGEFV 87 (118)
T ss_dssp E--EETTEEE
T ss_pred E--EECCEEE
Confidence 7 4567554
No 405
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.79 E-value=0.045 Score=49.53 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=51.8
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCc------------------cchhhhhhCCCccc--cE
Q 013240 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------------------KYSRLASKQEIDAF--PT 120 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~------------------~~~~l~~~~~i~~~--Pt 120 (447)
...+..|++++|++|......+.+.+... + +....++.+ ..+.+.+++|.+++ |.
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~-~----vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPq 117 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG-D----VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQ 117 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT-S----SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC-C----eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCE
Confidence 35778899999999999999999887642 1 422222221 12347888999988 99
Q ss_pred EEEEeCCeeEEecCCCCHHHHHHHHHHh
Q 013240 121 LKIFMHGIPTEYYGPRKAELLVRYLKKF 148 (447)
Q Consensus 121 l~~~~~g~~~~y~g~~~~~~i~~fi~~~ 148 (447)
+++ +|+.. .|..+.+.|.+-+.+.
T Consensus 118 I~I--ng~~~--v~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 118 AIL--NGRDH--VKGADVRGIYDRLDAF 141 (270)
T ss_dssp EEE--TTTEE--EETTCHHHHHHHHHHH
T ss_pred EEE--CCEEe--ecCCCHHHHHHHHHHh
Confidence 776 55431 2333567777766543
No 406
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=94.74 E-value=0.28 Score=39.74 Aligned_cols=95 Identities=8% Similarity=0.094 Sum_probs=61.2
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccchH----------------------hHHhhcCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA----------------------DFADTFEANK 324 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~----------------------~~~~~~~i~~ 324 (447)
.++++++.|+. .....-......|.++++++++ +.++.++..... ++++.||+
T Consensus 27 ~gk~vll~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 103 (152)
T 3gl3_A 27 TGSVVYLDFWA-SWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGV-- 103 (152)
T ss_dssp TTSEEEEEEEC-TTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTC--
T ss_pred CCCEEEEEEEC-CcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCC--
Confidence 34677776764 3444456667778888887764 788888776433 45667888
Q ss_pred CCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 325 KSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 325 ~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
...|++++++.+++. +...|. ...+.+.+.++|+..+.+.-.
T Consensus 104 -~~~P~~~lid~~G~i~~~~~g~----~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 104 -KGMPTSFLIDRNGKVLLQHVGF----RPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp -CSSSEEEEECTTSBEEEEEESC----CTTTHHHHHHHHHHHTC----
T ss_pred -CCCCeEEEECCCCCEEEEEccC----CCcCHHHHHHHHHHHHccccc
Confidence 679999999887532 223332 122457899999999887643
No 407
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=94.49 E-value=0.33 Score=39.41 Aligned_cols=91 Identities=12% Similarity=0.179 Sum_probs=61.0
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccc-------------------------hHhHHhhcC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-------------------------FADFADTFE 321 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~-------------------------~~~~~~~~~ 321 (447)
.++++++.|+. .....-......|.++++++++ +.++.|+.+. ...+++.||
T Consensus 28 ~gk~vll~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWF-AGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEEC-TTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEEC-CCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 34666666664 3444455666677777777654 7888887764 466778888
Q ss_pred CCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCccc
Q 013240 322 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 371 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~ 371 (447)
+ ...|++++++.+++..... ...+.+.++++.++.+...
T Consensus 107 v---~~~P~~~lid~~G~i~~~~--------~~~~~l~~~l~~l~~~~~~ 145 (152)
T 2lrn_A 107 I---VGFPHIILVDPEGKIVAKE--------LRGDDLYNTVEKFVNGAKE 145 (152)
T ss_dssp C---CSSCEEEEECTTSEEEEEC--------CCTTHHHHHHHHHHTSSSS
T ss_pred C---CcCCeEEEECCCCeEEEee--------CCHHHHHHHHHHHHhhccc
Confidence 8 6789999998875332210 1245899999988876543
No 408
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=94.38 E-value=0.023 Score=49.03 Aligned_cols=40 Identities=20% Similarity=0.486 Sum_probs=31.1
Q ss_pred CeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCCeEEEEEeC
Q 013240 61 DYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDA 103 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~---~~~a~~l~~~~~~v~~~~Vd~ 103 (447)
++.+|.|++.||+||++++|.+ .++.+.+.+ ++.|..++.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~---~v~~~~~~~ 64 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE---GTKMTKYHV 64 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT---TCCEEEEEC
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCC---CcEEEEEec
Confidence 7899999999999999999986 677776643 255555554
No 409
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=94.37 E-value=0.25 Score=41.57 Aligned_cols=89 Identities=11% Similarity=0.183 Sum_probs=56.4
Q ss_pred HHHhhCCCCcc--ccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHH-HH--HHHHHhCC-CceEEEEeccchHhHHhh
Q 013240 246 FIKQNFLPLSV--PINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVT-TL--KAAASANR-ELVFCYVGIKQFADFADT 319 (447)
Q Consensus 246 fI~~~~~p~~~--~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~-~l--~~~a~~~~-~~~f~~vd~~~~~~~~~~ 319 (447)
++.++....+. ..+.+.+......++|+++-|..+ -...-+.... .+ .++++... ++.++.||.++.++..+.
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~-WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~ 91 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYS-TCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNI 91 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECT-TCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccc-hhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHH
Confidence 44555444443 445677777777788998888753 3332222222 11 23333332 378999999887887766
Q ss_pred c--------CCCCCCCCceEEEEeCCc
Q 013240 320 F--------EANKKSKLPKMVVWDGNE 338 (447)
Q Consensus 320 ~--------~i~~~~~~P~vvi~~~~~ 338 (447)
+ |+ ...|+++++++++
T Consensus 92 y~~~~q~~~gv---~g~Pt~v~l~~dG 115 (173)
T 3ira_A 92 YMTVCQIILGR---GGWPLNIIMTPGK 115 (173)
T ss_dssp HHHHHHHHHSC---CCSSEEEEECTTS
T ss_pred HHHHHHHHcCC---CCCcceeeECCCC
Confidence 6 77 7899999999764
No 410
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=94.12 E-value=0.36 Score=38.68 Aligned_cols=87 Identities=13% Similarity=0.150 Sum_probs=57.4
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhC-CC--ceEEEEeccc-------------------------hHhHHhhc
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASAN-RE--LVFCYVGIKQ-------------------------FADFADTF 320 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~-~~--~~f~~vd~~~-------------------------~~~~~~~~ 320 (447)
.++++++.|+. .....-......|.++++++ .+ +.++.|+.+. ...+++.|
T Consensus 32 ~gk~vll~F~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWA-SWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEEC-GGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEEC-CCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 34667776664 23333455566777788877 43 7777776654 34678889
Q ss_pred CCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 321 EANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 321 ~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
|+ ...|++++++.+++..... .+.+.+.++++.+++
T Consensus 111 ~v---~~~P~~~lid~~G~i~~~~--------~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AI---LTLPTNILLSPTGKILARD--------IQGEALTGKLKELLK 146 (148)
T ss_dssp TC---CSSSEEEEECTTSBEEEES--------CCHHHHHHHHHHHC-
T ss_pred CC---CCcCEEEEECCCCeEEEec--------CCHHHHHHHHHHHHc
Confidence 88 6899999999876433221 146788888888765
No 411
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=93.84 E-value=0.49 Score=38.30 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=60.5
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccch-----------------------HhHHhhcCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF-----------------------ADFADTFEAN 323 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~-----------------------~~~~~~~~i~ 323 (447)
.++++++.|+. .....-......|.++++++++ +.++.|+.+.. ..+.+.||+
T Consensus 27 ~gk~vll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v- 104 (154)
T 3kcm_A 27 KGQVVIVNFWA-TWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGT- 104 (154)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTC-
T ss_pred CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCC-
Confidence 44677777764 4555556777788888888875 77877777643 236677888
Q ss_pred CCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 324 KKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 324 ~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
...|++++++.+++. +.+.|.. ..+.+.+.++|+.+..+.
T Consensus 105 --~~~P~~~lid~~G~i~~~~~g~~----~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 105 --TGVPETFVIDRHGVILKKVVGAM----EWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp --CSBCEEEEECTTSBEEEEEESCC----CTTSHHHHHHHHTC----
T ss_pred --CCCCeEEEECCCCcEEEEEcCCC----ccccHHHHHHHHHHHHHh
Confidence 679999999987533 3334422 224568888888776654
No 412
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=92.61 E-value=0.013 Score=46.66 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=62.6
Q ss_pred HHhhhcCCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhCCC-ceEEEEec--cchHhHHhhcCCCCCCCCceEEEEeC
Q 013240 263 LNLLKDDKRKIVLAIVEDETEEKSQKLVTTL---KAAASANRE-LVFCYVGI--KQFADFADTFEANKKSKLPKMVVWDG 336 (447)
Q Consensus 263 ~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l---~~~a~~~~~-~~f~~vd~--~~~~~~~~~~~i~~~~~~P~vvi~~~ 336 (447)
+......++++++.|+.. ....-..+...+ ..+++.+.+ +.|+.+|+ .+..++++.+++ ...|++++++.
T Consensus 12 ~~~~~~~~k~vlv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~d~ 87 (130)
T 2lst_A 12 LALAQAHGRMVMVYFHSE-HCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRV---PGTPTFVFLVP 87 (130)
Confidence 344444556777666642 333334455555 666666665 88888888 455788899998 77999999975
Q ss_pred C-ccc---eecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 337 N-ENY---LTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 337 ~-~~y---~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
+ ++. ..+. +..+.+.+.++++.++.+.
T Consensus 88 ~~G~~~~~~~~~------G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 88 KAGAWEEVGRLF------GSRPRAEFLKELRQVCVKG 118 (130)
Confidence 3 332 2233 3344668888988887654
No 413
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=93.42 E-value=0.55 Score=36.74 Aligned_cols=87 Identities=13% Similarity=0.051 Sum_probs=56.9
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEec----------------------------cchHhHHhh
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGI----------------------------KQFADFADT 319 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~----------------------------~~~~~~~~~ 319 (447)
.++++++.|+. .....-......|.++++++.+ +.++.++. .....+++.
T Consensus 21 ~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWA-SWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECC-TTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEc-CcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 34677666664 3555556777778888888764 77777732 123457778
Q ss_pred cCCCCCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHH
Q 013240 320 FEANKKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 320 ~~i~~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
+|+ ...|++++++.+++. .... +..+.+.+.++++.+
T Consensus 100 ~~v---~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 YGV---RSYPTQAFIDKEGKLVKTHP------GFMEKDAILQTLKEL 137 (138)
T ss_dssp TTC---CSSSEEEEECTTCCEEEEEE------SCCCHHHHHHHHHHC
T ss_pred cCc---ccCCeEEEECCCCcEEEeec------CCCcHHHHHHHHHhh
Confidence 888 678999999887533 2332 234567888887653
No 414
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=93.36 E-value=0.15 Score=42.52 Aligned_cols=105 Identities=10% Similarity=0.095 Sum_probs=64.5
Q ss_pred hHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHh-HHhhcCCCCCCCCceEEEEeCCcc
Q 013240 262 TLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFAD-FADTFEANKKSKLPKMVVWDGNEN 339 (447)
Q Consensus 262 ~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~-~~~~~~i~~~~~~P~vvi~~~~~~ 339 (447)
.+......++++++.|+. .....-......|.+++..+.. +.|+.||++..+. .+..+++ .....|++++++.+++
T Consensus 38 ~~~~~~~~~k~vlv~F~a-~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~-~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIHK-SWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSP-DGGYIPRILFLDPSGK 115 (164)
T ss_dssp HHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCT-TCSCSSEEEEECTTSC
T ss_pred HHHHHHhcCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcc-cCCcCCeEEEECCCCC
Confidence 344444556788887775 3555555666667665554432 6788888876655 6777887 4466999999976542
Q ss_pred -ceecCCCCCCC----cccchhHHHHHHHHHhcC
Q 013240 340 -YLTVIGSESID----EEDQGSQISRFLEGYREG 368 (447)
Q Consensus 340 -y~~~~g~~~~~----~~~~~~~i~~Fl~~~~~g 368 (447)
...+.|..... ...+.+.+.++|+.++..
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 22233321100 024577888888877654
No 415
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=93.35 E-value=0.7 Score=37.59 Aligned_cols=90 Identities=7% Similarity=0.004 Sum_probs=58.6
Q ss_pred CCcEEEEEEeCCChhhHHH-HHHHHHHHHHhCCC--ceEEEEecc----------------------------chHh---
Q 013240 270 KRKIVLAIVEDETEEKSQK-LVTTLKAAASANRE--LVFCYVGIK----------------------------QFAD--- 315 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~-~~~~l~~~a~~~~~--~~f~~vd~~----------------------------~~~~--- 315 (447)
++++++.|+.. ....-.. ....|.++++++++ +.|+.|+.. ....
T Consensus 30 gk~vlv~F~a~-~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 30 GKVVVVEVFQM-LCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TSEEEEEEECT-TCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCEEEEEEEcC-CCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 46666666653 4454455 46778888888764 777777541 1122
Q ss_pred ---HHhhcCCCCCCCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 316 ---FADTFEANKKSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 316 ---~~~~~~i~~~~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
+.+.||+ ...|++++++.+++.. .+. +..+.+.+.++|+.++..+
T Consensus 109 ~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~i~~ll~~~ 157 (160)
T 3lor_A 109 IPSTMKKYRL---EGTPSIILADRKGRIRQVQF------GQVDDFVLGLLLGSLLSET 157 (160)
T ss_dssp SCHHHHHTTC---CSSSEEEEECTTSBEEEEEE------SCCCHHHHHHHHHHHHTCC
T ss_pred hhhHHHhccc---CccceEEEECCCCcEEEEec------CcCCHHHHHHHHHHHHhcc
Confidence 6677877 6789999999875332 222 2345678999999888653
No 416
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=93.26 E-value=0.15 Score=43.34 Aligned_cols=55 Identities=13% Similarity=0.199 Sum_probs=39.1
Q ss_pred CCeEEEEEE-CCCChhhh-hhhHHHHHHHHHh-hcCCCCe-EEEEEeCcc---chhhhhhCCCc
Q 013240 60 FDYILVDFY-APWCGHCK-RLAPQLDEAAPIL-AKLKEPI-VIAKVDADK---YSRLASKQEID 116 (447)
Q Consensus 60 ~~~~lV~f~-~~~C~~C~-~~~p~~~~~a~~l-~~~~~~v-~~~~Vd~~~---~~~l~~~~~i~ 116 (447)
.+++++.|| ..||+.|- .-.+.|.+.+.++ +..+ + .+..|.++. +...|+++++.
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g--~~~V~gvS~D~~~~~~~~~~~~~~~ 104 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN--FDDIYCITNNDIYVLKSWFKSMDIK 104 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC--CSEEEEEESSCHHHHHHHHHHTTCC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEeCCCHHHHHHHHHHcCCC
Confidence 467777777 68999999 8889999999988 6654 4 356666654 34455566554
No 417
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=92.85 E-value=0.62 Score=39.31 Aligned_cols=95 Identities=14% Similarity=0.183 Sum_probs=57.8
Q ss_pred CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEecc-----------------------------chHhHHhhc
Q 013240 271 RKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK-----------------------------QFADFADTF 320 (447)
Q Consensus 271 ~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~-----------------------------~~~~~~~~~ 320 (447)
+++++.|+. .....-......|.++++++.+ +.++.|+.. ...++.+.|
T Consensus 34 k~vlv~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 34 PLLAVVFMC-NHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAY 112 (188)
T ss_dssp SEEEEEEEC-SSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHT
T ss_pred CEEEEEEEC-CCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHc
Confidence 555555553 3344344445566666666665 666666552 224566777
Q ss_pred CCCCCCCCceEEEEeCCccceecCCCCC----CCcccchhHHHHHHHHHhcCcc
Q 013240 321 EANKKSKLPKMVVWDGNENYLTVIGSES----IDEEDQGSQISRFLEGYREGRT 370 (447)
Q Consensus 321 ~i~~~~~~P~vvi~~~~~~y~~~~g~~~----~~~~~~~~~i~~Fl~~~~~gkl 370 (447)
|+ ...|++++++.+++.... |... ..+..+.+.+.+.|+.++.++-
T Consensus 113 ~v---~~~P~~~lid~~G~i~~~-g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 113 RA---LRTPEVFLFDERRLLRYH-GRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp TC---CEESEEEEECTTCBEEEE-ECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred CC---CCCCeEEEECCCCcEEEE-EecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 77 568999999987643332 3211 1123356789999999998863
No 418
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=92.68 E-value=0.2 Score=41.15 Aligned_cols=103 Identities=7% Similarity=0.006 Sum_probs=62.2
Q ss_pred ccccChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CceEEEEe-----------------------
Q 013240 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVG----------------------- 309 (447)
Q Consensus 255 ~~~l~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd----------------------- 309 (447)
+..++...+......++++++.|+. .....-......|.+++++++ ++.++.|.
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWA-SWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECC-TTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 3334444443333345677776663 445555666677777777643 34444443
Q ss_pred -----ccchHhHHhhcCCCCCCCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 310 -----IKQFADFADTFEANKKSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 310 -----~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
.+...++++.|++ ...|++++++.+++.. .+. +..+.+.+.++++.++.
T Consensus 102 ~~~~~~d~~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNI---SVYPSWALIGKDGDVQRIVK------GSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTTCHHHHHTTC---CSSSEEEEECTTSCEEEEEE------SCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCchHHHHHcCC---CccceEEEECCCCcEEEEEc------CCCCHHHHHHHHHHHHH
Confidence 2234567778888 6789999998865332 232 33457789999988765
No 419
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=92.64 E-value=0.62 Score=37.70 Aligned_cols=87 Identities=7% Similarity=0.029 Sum_probs=55.3
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEecc-----------------------chHhHHhhcCCCCCC
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-----------------------QFADFADTFEANKKS 326 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~-----------------------~~~~~~~~~~i~~~~ 326 (447)
++++++.|+. .....-......|.+++++ .++.|..++.. ....+++.+|+ .
T Consensus 42 gk~~ll~f~~-~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~ 116 (156)
T 1kng_A 42 GKVSLVNVWA-SWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV---Y 116 (156)
T ss_dssp TSCEEEEEEC-TTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC---C
T ss_pred CCEEEEEEEc-ccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc---C
Confidence 5677777765 3445556666777777666 44777777643 23456677887 6
Q ss_pred CCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 327 KLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 327 ~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
..|++++++.+++.. .+. +..+.+.+.++++.+++
T Consensus 117 ~~P~~~~id~~G~i~~~~~------g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKLV------GPITPDNLRSVLLPQME 152 (156)
T ss_dssp SSCEEEEECTTSBEEEEEE------SCCCHHHHHHTHHHHHH
T ss_pred ccCeEEEEcCCCCEEEEEe------CCCCHHHHHHHHHHHHH
Confidence 789999998865432 232 23446678887777653
No 420
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=92.55 E-value=0.96 Score=36.68 Aligned_cols=90 Identities=8% Similarity=0.009 Sum_probs=58.8
Q ss_pred CCcEEEEEEeCCChhhHHHH-HHHHHHHHHhCCC--ceEEEEecc----------------------------chH----
Q 013240 270 KRKIVLAIVEDETEEKSQKL-VTTLKAAASANRE--LVFCYVGIK----------------------------QFA---- 314 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~-~~~l~~~a~~~~~--~~f~~vd~~----------------------------~~~---- 314 (447)
++++++.|+. .....-... ...|.++++++++ +.|+.|+.. ...
T Consensus 28 gk~vlv~f~a-~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 28 GKVIVIEAFQ-MLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TSEEEEEEEC-TTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCEEEEEEEC-CcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 4666666664 344445553 6778888888763 777766631 111
Q ss_pred -hHHhhcCCCCCCCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 315 -DFADTFEANKKSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 315 -~~~~~~~i~~~~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
.+++.||+ ...|++++++.+++.. .+. +..+.+.+.++|+.++...
T Consensus 107 ~~~~~~~~v---~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 107 PRTMAAYQM---RGTPSLLLIDKAGDLRAHHF------GDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp CHHHHHTTC---CSSSEEEEECTTSEEEEEEE------SCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHHcCC---CCCCEEEEECCCCCEEEEEe------CCCCHHHHHHHHHHHhccC
Confidence 46777887 6789999999876432 222 2345678999999988654
No 421
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=92.34 E-value=1.4 Score=35.76 Aligned_cols=74 Identities=12% Similarity=0.190 Sum_probs=53.9
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CceEEEEeccc-------------------hHhHHhhcCCCCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQ-------------------FADFADTFEANKKSK 327 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~-------------------~~~~~~~~~i~~~~~ 327 (447)
.++++++.|+. .....-......|.+++++++ ++.|+.++.+. ..++.+.|++ ..
T Consensus 40 ~gk~vll~F~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~ 115 (158)
T 3hdc_A 40 RGKIVLVNFWA-SWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGA---NR 115 (158)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTC---CS
T ss_pred CCCEEEEEEEC-CcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCC---CC
Confidence 34677777774 455556677788999999987 48888888765 4678888988 67
Q ss_pred CceEEEEeCCcc-ceecCCC
Q 013240 328 LPKMVVWDGNEN-YLTVIGS 346 (447)
Q Consensus 328 ~P~vvi~~~~~~-y~~~~g~ 346 (447)
.|++++++.+++ ...+.|.
T Consensus 116 ~P~~~lid~~G~i~~~~~G~ 135 (158)
T 3hdc_A 116 LPDTFIVDRKGIIRQRVTGG 135 (158)
T ss_dssp SSEEEEECTTSBEEEEEESC
T ss_pred cceEEEEcCCCCEEEEEeCC
Confidence 999999998753 3334443
No 422
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=91.75 E-value=1.2 Score=37.76 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=56.3
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEecc-----------------------------chHhHHhhcC
Q 013240 273 IVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIK-----------------------------QFADFADTFE 321 (447)
Q Consensus 273 ~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~-----------------------------~~~~~~~~~~ 321 (447)
+++.|+. .....-......|.++.+++.+ +.++.|+.+ ...++++.|+
T Consensus 49 vlv~F~a-~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 49 TVIMFIC-NHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEECC-SSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred EEEEEeC-CCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 5555543 3444444555666666666543 667666652 2345667777
Q ss_pred CCCCCCCceEEEEeCCccceec-CCCCC---CCcccchhHHHHHHHHHhcCcc
Q 013240 322 ANKKSKLPKMVVWDGNENYLTV-IGSES---IDEEDQGSQISRFLEGYREGRT 370 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~y~~~-~g~~~---~~~~~~~~~i~~Fl~~~~~gkl 370 (447)
+ ...|++++++.+++.... .+... ..+..+.+.+.+.|+.++.++-
T Consensus 128 v---~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 128 A---ACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp C---CEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred C---CCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 7 568999999987533221 11000 1234567899999999998863
No 423
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=91.46 E-value=1.8 Score=36.19 Aligned_cols=95 Identities=11% Similarity=0.110 Sum_probs=60.0
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CceEEEEeccch-----HhHHhhcCCCC------------------
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQF-----ADFADTFEANK------------------ 324 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~~-----~~~~~~~~i~~------------------ 324 (447)
++++++.|+. .....-......|.++.++++ ++.++.|+.+.. ..+++.+++..
T Consensus 60 gk~vll~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 60 GKTLLVNLWA-TWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCEEEEEEEe-CCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 4667776764 344555666677888888776 477777766532 56777777610
Q ss_pred --CCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 325 --KSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 325 --~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
....|++++++.+++. +.+.|.. ..+.+.+.++|+..+.++
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~----~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPA----EWASEDALKLIRAATGKA 182 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCC----CTTSHHHHHHHHHHHC--
T ss_pred cccCCCCEEEEECCCCCEEEEEecCC----ccCHHHHHHHHHHHhccc
Confidence 0268999999987532 2333322 223578999999988765
No 424
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=91.42 E-value=0.96 Score=39.40 Aligned_cols=55 Identities=13% Similarity=0.278 Sum_probs=37.7
Q ss_pred HhHHhhcCCCCCCCCceEEEEeCCccceecCCCCC-----CCcccchhHHHHHHHHHhcCcccc
Q 013240 314 ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSES-----IDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 314 ~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~-----~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
.++.+.||+ ...|++++++.+++... .|..+ .....+.+.|.+.|+.++.|+-.+
T Consensus 133 ~~~~~~~~v---~~~P~~~liD~~G~i~~-~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 133 QSVAKAYGA---ACTPDFFLYDRERRLVY-HGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVG 192 (218)
T ss_dssp CHHHHHHTC---CEESEEEEECTTCBEEE-EECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCC
T ss_pred cHHHHHcCC---CCCCeEEEECCCCcEEE-eccccccccccccccCHHHHHHHHHHHHcCCCCC
Confidence 467778888 56899999998764332 22111 123456789999999999997443
No 425
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=91.36 E-value=1.1 Score=37.43 Aligned_cols=92 Identities=10% Similarity=0.103 Sum_probs=56.8
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--c------eEEEEeccc-hH----hHHhhcCCC------------
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--L------VFCYVGIKQ-FA----DFADTFEAN------------ 323 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~------~f~~vd~~~-~~----~~~~~~~i~------------ 323 (447)
.++++++.|+. .....-......|.++++++++ + .|+.|+.+. .+ .+++.+++.
T Consensus 58 ~gk~vlv~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWG-QWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEEC-CcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 34677777764 4455455666677777776643 6 888888765 33 343333330
Q ss_pred ------CCCCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 324 ------KKSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 324 ------~~~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
.....|.+++++.+++.. .+. +..+.+.+.++|+.+++
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAAVFL------REVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEEEEC------SCCCHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEEEEc------CCCCHHHHHHHHHHHHh
Confidence 125689999998875432 232 33457789999988764
No 426
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=91.34 E-value=1.1 Score=36.91 Aligned_cols=87 Identities=9% Similarity=0.023 Sum_probs=52.0
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEec-----------------------cchHhHHhhcCCCCC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI-----------------------KQFADFADTFEANKK 325 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~-----------------------~~~~~~~~~~~i~~~ 325 (447)
.++++++.|+. .....-......|.+++++ ++.++.|+. +....+++.+|+
T Consensus 50 ~gk~vll~F~a-~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--- 123 (168)
T 2b1k_A 50 QGKPVLLNVWA-TWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGV--- 123 (168)
T ss_dssp CSSCEEEEEEC-TTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTC---
T ss_pred CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCc---
Confidence 44666666664 3444445556666666665 555666652 233457777888
Q ss_pred CCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 326 SKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 326 ~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
...|+.++++.+++.. .+.| ..+.+.+.++++..+.
T Consensus 124 ~~~P~~~lid~~G~i~~~~~g------~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 124 YGAPETFLIDGNGIIRYRHAG------DLNPRVWEEEIKPLWE 160 (168)
T ss_dssp CSSSEEEEECTTSBEEEEEES------CCCHHHHHHTTHHHHH
T ss_pred cccCEEEEECCCCeEEEEEeC------CCCHHHHHHHHHHHHH
Confidence 5789888888865332 2322 3345667777666553
No 427
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=91.25 E-value=0.29 Score=41.72 Aligned_cols=41 Identities=10% Similarity=0.250 Sum_probs=31.8
Q ss_pred CCeEEEEEECCCChhhhhhhHHH-HHHHHHhhcCCCCeEEEEEeC
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQL-DEAAPILAKLKEPIVIAKVDA 103 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~-~~~a~~l~~~~~~v~~~~Vd~ 103 (447)
.++.+|.|++.+|++|..+.+.+ .++.+.+.. .|.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~---~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD---IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT---TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC---ceEEEEEec
Confidence 46788999999999999999999 888876532 366655554
No 428
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=91.20 E-value=0.54 Score=37.55 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=42.3
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccchHh-------------------------HHhhcC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFAD-------------------------FADTFE 321 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~-------------------------~~~~~~ 321 (447)
.++++++.|+.. ....-......|.++++++++ +.|+.|+.+..++ +++.+|
T Consensus 30 ~gk~vll~f~~~-~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDS-QCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECG-GGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECC-CCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 345666666642 222223344556666666553 7788877764444 777788
Q ss_pred CCCCCCCceEEEEeCCcc
Q 013240 322 ANKKSKLPKMVVWDGNEN 339 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~ 339 (447)
+ ...|++++++.+++
T Consensus 109 i---~~~P~~~lid~~G~ 123 (148)
T 3hcz_A 109 I---YATPVLYVLDKNKV 123 (148)
T ss_dssp C---CSSCEEEEECTTCB
T ss_pred c---CCCCEEEEECCCCc
Confidence 7 67899999998753
No 429
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=91.13 E-value=1.9 Score=34.60 Aligned_cols=85 Identities=8% Similarity=0.193 Sum_probs=52.8
Q ss_pred CCcEEEEEEeCCChhh--HHHHHHHHHHHHHhC-C--CceEEEEeccch-------------------------HhHHhh
Q 013240 270 KRKIVLAIVEDETEEK--SQKLVTTLKAAASAN-R--ELVFCYVGIKQF-------------------------ADFADT 319 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~--~~~~~~~l~~~a~~~-~--~~~f~~vd~~~~-------------------------~~~~~~ 319 (447)
++++++.|+.. .... -......|.++.+++ + ++.++.|+.+.. .++.+.
T Consensus 33 gk~vll~F~a~-~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 33 QKSLLINFWAS-WNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TSEEEEEEECT-TCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCEEEEEEEeC-CCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 45666666643 3333 455566677777766 3 366766655433 256777
Q ss_pred cCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 320 FEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 320 ~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
||+ ...|++++++.+++..... .+.+.+.+.++.++
T Consensus 112 ~~v---~~~P~~~lid~~G~i~~~~--------~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 112 YSI---YKIPANILLSSDGKILAKN--------LRGEELKKKIENIV 147 (150)
T ss_dssp TTC---CSSSEEEEECTTSBEEEES--------CCHHHHHHHHHHHH
T ss_pred cCC---CccCeEEEECCCCEEEEcc--------CCHHHHHHHHHHHH
Confidence 888 6789999999876433221 14567777777665
No 430
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=90.83 E-value=0.61 Score=36.53 Aligned_cols=62 Identities=11% Similarity=0.037 Sum_probs=38.1
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhC--------CCccccEEEEEeCCeeE
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQ--------EIDAFPTLKIFMHGIPT 130 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~----l~~~~--------~i~~~Ptl~~~~~g~~~ 130 (447)
++.|+++.|+.|+-. ..=.++-..|+..+ |.|-.+|.+.+++ +.++. |...+|.++ .+|..+
T Consensus 2 V~vYtt~~c~~c~~k-k~c~~aK~lL~~kg--V~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIF--i~~~~i 75 (121)
T 1u6t_A 2 IRVYIASSSGSTAIK-KKQQDVLGFLEANK--IGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIF--NESQYR 75 (121)
T ss_dssp EEEEECTTCSCHHHH-HHHHHHHHHHHHTT--CCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEE--ETTEEE
T ss_pred EEEEecCCCCCccch-HHHHHHHHHHHHCC--CceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEE--ECCEEE
Confidence 567789999999421 22222334444443 8899999986644 44455 677788765 455433
No 431
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=90.78 E-value=0.27 Score=38.45 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=43.5
Q ss_pred hhhHHHhHccCCeEEEEEE-----CCCChhhhhhhHHHHHHHHHhhcCCCCe-EEEEEeCccchhhhh----hCCCcccc
Q 013240 50 ESNFDSAISSFDYILVDFY-----APWCGHCKRLAPQLDEAAPILAKLKEPI-VIAKVDADKYSRLAS----KQEIDAFP 119 (447)
Q Consensus 50 ~~~f~~~~~~~~~~lV~f~-----~~~C~~C~~~~p~~~~~a~~l~~~~~~v-~~~~Vd~~~~~~l~~----~~~i~~~P 119 (447)
.+..++++++++. |.|. .|.|++|++....+.+. + + .+..+|...++++.+ .-+-+.+|
T Consensus 10 ~e~i~~~i~~~~V--vvF~Kgt~~~P~C~fc~~ak~lL~~~-----g----v~~~~~~~v~~~~~~r~~l~~~sg~~TvP 78 (118)
T 2wul_A 10 AEQLDALVKKDKV--VVFLKGTPEQPQCGFSNAVVQILRLH-----G----VRDYAAYNVLDDPELRQGIKDYSNWPTIP 78 (118)
T ss_dssp HHHHHHHHHHSSE--EEEESBCSSSBSSHHHHHHHHHHHHT-----T----CCSCEEEETTSCHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHHhcCCE--EEEEcCCCCCCCCHHHHHHHHHHHHh-----C----CcCeEeecccCCHHHHHHHHHhccCCCCC
Confidence 4567888877554 3343 36899999887666532 2 3 367778877766533 34667788
Q ss_pred EEEEEeCCeeE
Q 013240 120 TLKIFMHGIPT 130 (447)
Q Consensus 120 tl~~~~~g~~~ 130 (447)
.++ .+|+.+
T Consensus 79 qIF--I~g~~I 87 (118)
T 2wul_A 79 QVY--LNGEFV 87 (118)
T ss_dssp EEE--ETTEEE
T ss_pred eEe--ECCEEE
Confidence 874 566554
No 432
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=90.60 E-value=0.92 Score=37.63 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=52.0
Q ss_pred cCCCcEEEEEEeCCChhhHHHHH------HHHHHHHHhCCCceEEEEeccchHhH-------------------------
Q 013240 268 DDKRKIVLAIVEDETEEKSQKLV------TTLKAAASANRELVFCYVGIKQFADF------------------------- 316 (447)
Q Consensus 268 ~~~~~~vl~~~~~~~~~~~~~~~------~~l~~~a~~~~~~~f~~vd~~~~~~~------------------------- 316 (447)
..++++++.|... ....-.... ..+.+.... ++.|+.+|.++..+.
T Consensus 45 ~~gk~vlv~F~A~-WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (172)
T 3f9u_A 45 QHNKPVMLDFTGY-GCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYL 121 (172)
T ss_dssp HTTCCEEEEEECT-TCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHH
T ss_pred HcCCeEEEEEECC-CCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHH
Confidence 4567888877753 333333321 223332222 488889988654432
Q ss_pred -HhhcCCCCCCCCceEEEEeCCccc-eecCCCCCCCcccc-hhHHHHHHHHHhc
Q 013240 317 -ADTFEANKKSKLPKMVVWDGNENY-LTVIGSESIDEEDQ-GSQISRFLEGYRE 367 (447)
Q Consensus 317 -~~~~~i~~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~-~~~i~~Fl~~~~~ 367 (447)
.+.+++ ...|++++++.+++. .... +... .+.+.+|++..++
T Consensus 122 ~~~~~~v---~~~Pt~~lid~~G~~~~~~~------G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 122 QRVKFGA---NAQPFYVLIDNEGNPLNKSY------AYDEDISKYINFLQTGLE 166 (172)
T ss_dssp HHHHHSC---CCSSEEEEECTTSCBSSCCB------CSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCC---CCcceEEEECCCCCEEeecc------CCCCCHHHHHHHHHHHHH
Confidence 577888 689999999886532 2222 2333 5677777776653
No 433
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=89.30 E-value=2.5 Score=35.13 Aligned_cols=86 Identities=7% Similarity=-0.021 Sum_probs=49.1
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEec-----------------------cchHhHHhhcCCCCCC
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI-----------------------KQFADFADTFEANKKS 326 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~-----------------------~~~~~~~~~~~i~~~~ 326 (447)
++++++.|+. .....-......|.+++++ ++.++.|+. +....+++.||+ .
T Consensus 58 gk~vll~F~a-~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~ 131 (176)
T 3kh7_A 58 GKPALVNVWG-TWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGV---Y 131 (176)
T ss_dssp SSCEEEEEEC-TTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTC---C
T ss_pred CCEEEEEEEC-CcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCC---C
Confidence 3555555553 3344444445556666555 444544442 223456667777 5
Q ss_pred CCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 327 KLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 327 ~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
..|++++++.+++.. .+. +..+.+.+.+++..++.
T Consensus 132 ~~P~~~lid~~G~i~~~~~------g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIV------GVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp SSCEEEEECTTCBEEEEEE------SCCCHHHHHHHTHHHHH
T ss_pred CCCeEEEECCCCeEEEEEc------CCCCHHHHHHHHHHHHH
Confidence 789999999875332 232 23456677777777765
No 434
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=89.29 E-value=0.47 Score=41.22 Aligned_cols=45 Identities=20% Similarity=0.141 Sum_probs=37.3
Q ss_pred cchhhhhhCCCccccEEEEEeCCeeE-EecCCCCHHHHHHHHHHhc
Q 013240 105 KYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 105 ~~~~l~~~~~i~~~Ptl~~~~~g~~~-~y~g~~~~~~i~~fi~~~~ 149 (447)
.+.+.++++||.++|+++++.+|+.. .+.|....+.+.+.+.+.+
T Consensus 164 ~~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 164 AGFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 34567888999999999999999764 4789999999999887765
No 435
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=88.27 E-value=0.19 Score=47.46 Aligned_cols=71 Identities=7% Similarity=0.141 Sum_probs=40.0
Q ss_pred hHHHhHccCCeEEEEEECCCChhhhhhhH-HHHHHHHHhhcCCCCeEEEEEeC-ccc----hhhhhhCCCccccEEEEEe
Q 013240 52 NFDSAISSFDYILVDFYAPWCGHCKRLAP-QLDEAAPILAKLKEPIVIAKVDA-DKY----SRLASKQEIDAFPTLKIFM 125 (447)
Q Consensus 52 ~f~~~~~~~~~~lV~f~~~~C~~C~~~~p-~~~~~a~~l~~~~~~v~~~~Vd~-~~~----~~l~~~~~i~~~Ptl~~~~ 125 (447)
..+++++.++ ++.|+.+||++|++... .+++..-.+ ..+.+..+|- +.. ..|.+..|.+.+|.++ .
T Consensus 253 ~V~~lI~~~~--VvVYsk~~CPyC~~Ak~~LL~~~gV~y----~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVF--I 324 (362)
T 2jad_A 253 HVKDLIAENE--IFVASKTYCPYSHAALNTLFEKLKVPR----SKVLVLQLNDMKEGADIQAALYEINGQRTVPNIY--I 324 (362)
T ss_dssp HHHHHHHTCS--EEEEECTTCHHHHHHHHHHHTTTCCCT----TTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEE--E
T ss_pred HHHHHhccCC--EEEEEcCCCcchHHHHHHHHHHcCCCc----ceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEE--E
Confidence 3455665543 66688999999998754 333321111 1233333321 122 3345567889999875 4
Q ss_pred CCeeE
Q 013240 126 HGIPT 130 (447)
Q Consensus 126 ~g~~~ 130 (447)
+|+.+
T Consensus 325 ~Gk~I 329 (362)
T 2jad_A 325 NGKHI 329 (362)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 77654
No 436
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=88.07 E-value=6.6 Score=29.46 Aligned_cols=84 Identities=12% Similarity=0.185 Sum_probs=64.7
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHH
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVR 143 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~ 143 (447)
...|.+..-+.+.+......++-+.... +.++.+-.||..++|++++.++|-.+||++-..+.-....-|.--...+..
T Consensus 14 ~lLyvag~tp~S~~ai~nL~~i~e~~l~-~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~P~rriiGd~i~~ql~~ 92 (105)
T 1t4y_A 14 LLQLFVDTRPLSQHIVQRVKNILAAVEA-TVPISLQVINVADQPQLVEYYRLVVTPALVKIGPGSRQVLSGIDLTDQLAN 92 (105)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHHHCC-SSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESSSCEEEESSCHHHHHHH
T ss_pred heeeEeCCCccHHHHHHHHHHHHHHhcc-CCceEEEEeecccCHHHHhHcCeeeccHhhccCCCCceEEeChHHHHHHHH
Confidence 3355566677888888888887666542 345999999999999999999999999999877654455778877788887
Q ss_pred HHHHh
Q 013240 144 YLKKF 148 (447)
Q Consensus 144 fi~~~ 148 (447)
|.-+-
T Consensus 93 wwprW 97 (105)
T 1t4y_A 93 QLPQW 97 (105)
T ss_dssp HHHHH
T ss_pred HhHHH
Confidence 76543
No 437
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=87.88 E-value=3 Score=33.13 Aligned_cols=67 Identities=6% Similarity=0.144 Sum_probs=47.2
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CceEEEEeccc------------------------hHhHHhhcC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQ------------------------FADFADTFE 321 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~------------------------~~~~~~~~~ 321 (447)
.++++++.|.. .....-......|.+++++++ ++.++.|+.+. ...+++.++
T Consensus 27 ~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSA-SWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN 105 (146)
T ss_dssp TTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEc-cCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC
Confidence 34667776665 455555667777888888776 47787877654 245777888
Q ss_pred CCCCCCCceEEEEe-CCcc
Q 013240 322 ANKKSKLPKMVVWD-GNEN 339 (447)
Q Consensus 322 i~~~~~~P~vvi~~-~~~~ 339 (447)
+ ...|++++++ .+++
T Consensus 106 v---~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 V---ESIPTLIGVDADSGD 121 (146)
T ss_dssp C---CSSSEEEEEETTTCC
T ss_pred C---CCCCEEEEEECCCCe
Confidence 8 6799999999 6653
No 438
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=87.85 E-value=2.1 Score=33.38 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=29.5
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccch-------hhhhhCCC
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS-------RLASKQEI 115 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~-------~l~~~~~i 115 (447)
++.|+.|+|+.|++....+++. + +.+-.+|...++ ++.+++|+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-----g----i~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-----G----IDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----T----CCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHHc-----C----CcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 5677899999999987777662 2 556667775443 34556664
No 439
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=87.61 E-value=2.5 Score=32.18 Aligned_cols=75 Identities=8% Similarity=0.166 Sum_probs=52.7
Q ss_pred EEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCccc
Q 013240 274 VLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEED 353 (447)
Q Consensus 274 vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~ 353 (447)
+++| .......-+.....|.+++.++. +.|..+|.++.+++...+|+ . .|+++++..++.. ..| .+
T Consensus 32 vv~y-~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv---~-VP~l~~~~dG~~v--~~g------~~ 97 (107)
T 2fgx_A 32 LVVY-GREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYND---R-VPVLFAVNEDKEL--CHY------FL 97 (107)
T ss_dssp EEEE-ECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTT---S-CSEEEETTTTEEE--ECS------SC
T ss_pred EEEE-eCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCC---C-CceEEEEECCEEE--Eec------CC
Confidence 4444 44566777788888999888875 88999999988999999987 4 9998766443221 122 23
Q ss_pred chhHHHHHH
Q 013240 354 QGSQISRFL 362 (447)
Q Consensus 354 ~~~~i~~Fl 362 (447)
+.+.|.+||
T Consensus 98 ~~~~L~~~L 106 (107)
T 2fgx_A 98 DSDVIGAYL 106 (107)
T ss_dssp CCHHHHHHH
T ss_pred CHHHHHHHh
Confidence 456788876
No 440
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=87.60 E-value=3.2 Score=32.85 Aligned_cols=68 Identities=10% Similarity=0.159 Sum_probs=47.7
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CceEEEEeccc------------------------hHhHHhhcC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQ------------------------FADFADTFE 321 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~------------------------~~~~~~~~~ 321 (447)
.++++++.|.. .....-......|.+++++++ ++.++.|+.+. ...+++.|+
T Consensus 27 ~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSA-SWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD 105 (144)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC
Confidence 34677776665 455555667777888888776 47787777654 245777888
Q ss_pred CCCCCCCceEEEEe-CCccc
Q 013240 322 ANKKSKLPKMVVWD-GNENY 340 (447)
Q Consensus 322 i~~~~~~P~vvi~~-~~~~y 340 (447)
+ ...|++++++ .+++.
T Consensus 106 v---~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 106 V---KSIPTLVGVEADSGNI 122 (144)
T ss_dssp C---CSSSEEEEEETTTCCE
T ss_pred C---CCCCEEEEEECCCCcE
Confidence 8 6799999999 66543
No 441
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=87.53 E-value=3.1 Score=32.83 Aligned_cols=67 Identities=7% Similarity=0.186 Sum_probs=46.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CceEEEEeccc------------------------hHhHHhhcC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQ------------------------FADFADTFE 321 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~------------------------~~~~~~~~~ 321 (447)
.++++++.|+. .....-......|.+++++++ ++.++.|+.+. ..++++.|+
T Consensus 27 ~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSA-SWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp TTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEEEEC-cCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 34677776664 355555666777888888765 47777776654 235777888
Q ss_pred CCCCCCCceEEEEe-CCcc
Q 013240 322 ANKKSKLPKMVVWD-GNEN 339 (447)
Q Consensus 322 i~~~~~~P~vvi~~-~~~~ 339 (447)
+ ...|++++++ .+++
T Consensus 106 v---~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 106 V---ESIPTLITINADTGA 121 (144)
T ss_dssp C---CSSSEEEEEETTTCC
T ss_pred C---CCCCEEEEEECCCCe
Confidence 8 6799999999 6653
No 442
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=87.22 E-value=0.47 Score=42.89 Aligned_cols=28 Identities=29% Similarity=0.476 Sum_probs=23.7
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHH
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAP 87 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~ 87 (447)
.+..++.|+.|.|++|+++++.+.+..+
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK 174 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh
Confidence 4588999999999999999998886443
No 443
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=86.86 E-value=0.73 Score=47.02 Aligned_cols=67 Identities=30% Similarity=0.451 Sum_probs=45.2
Q ss_pred hhHHHhHccCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc---hh----hhhhCCCccccEEEE
Q 013240 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---SR----LASKQEIDAFPTLKI 123 (447)
Q Consensus 51 ~~f~~~~~~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~---~~----l~~~~~i~~~Ptl~~ 123 (447)
+.++++++.++ ++.|+.+||++|++....+.+. + +.+-.+|.+.. .+ +.+..+...+|.+
T Consensus 9 ~~v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~-----~----i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v-- 75 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSKTTCPYCKKVKDVLAEA-----K----IKHATIELDQLSNGSAIQKCLASFSKIETVPQM-- 75 (598)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT-----T----CCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE--
T ss_pred HHHHHHhccCC--EEEEECCCChhHHHHHHHHHHC-----C----CCcEEEEcccCcchHHHHHHHHHHhCCceeCEE--
Confidence 55777776544 6779999999999988777753 1 34556676543 23 3334678889987
Q ss_pred EeCCeeE
Q 013240 124 FMHGIPT 130 (447)
Q Consensus 124 ~~~g~~~ 130 (447)
|.+|+.+
T Consensus 76 ~i~g~~i 82 (598)
T 2x8g_A 76 FVRGKFI 82 (598)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 5577654
No 444
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=86.83 E-value=3.4 Score=33.92 Aligned_cols=68 Identities=3% Similarity=0.115 Sum_probs=48.0
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CceEEEEeccch------------------------HhHHhhcC
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQF------------------------ADFADTFE 321 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~~------------------------~~~~~~~~ 321 (447)
.++++++.|+. .....-......|.+++++++ ++.++.|+.+.. .++++.|+
T Consensus 47 ~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSA-SWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS 125 (165)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEEC-CcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC
Confidence 34677776764 455555677777888888765 377777765543 56778888
Q ss_pred CCCCCCCceEEEEeCC-ccc
Q 013240 322 ANKKSKLPKMVVWDGN-ENY 340 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~-~~y 340 (447)
+ ...|++++++.+ ++.
T Consensus 126 v---~~~Pt~~lid~~~G~i 142 (165)
T 3s9f_A 126 V---ESIPTLIGLNADTGDT 142 (165)
T ss_dssp C---CSSSEEEEEETTTCCE
T ss_pred C---CCCCEEEEEeCCCCEE
Confidence 8 689999999986 644
No 445
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=86.69 E-value=0.68 Score=38.82 Aligned_cols=54 Identities=6% Similarity=-0.092 Sum_probs=40.6
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCCeE-EEEEeCccc---hhhhhhCCC
Q 013240 60 FDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIV-IAKVDADKY---SRLASKQEI 115 (447)
Q Consensus 60 ~~~~lV~f~-~~~C~~C~~~~p~~~~~a~~l~~~~~~v~-~~~Vd~~~~---~~l~~~~~i 115 (447)
.+++++.|| ..||+-|..-.+.|.+.+.+++..+ +. +..|.++.- ...|+++++
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g--v~~VigIS~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG--YHTIACIAVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT--CCEEEEEESSCHHHHHHHHHHHCT
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCCHHHHHHHHHhcCC
Confidence 467777777 6799999999999999999998755 53 666777543 456666665
No 446
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=85.65 E-value=2.9 Score=28.87 Aligned_cols=52 Identities=17% Similarity=0.066 Sum_probs=38.1
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhCCC-ceEEEEeccchHhHHhhcCCCCCCCCceEEE
Q 013240 275 LAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 275 l~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi 333 (447)
+.|+.. ....-+.....+.++++++.+ +.+..+| .++.++.+|+ ...|++++
T Consensus 4 v~f~a~-wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v---~~~Pt~~~ 56 (77)
T 1ilo_A 4 IQIYGT-GCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGL---TALPGLAV 56 (77)
T ss_dssp EEEECS-SSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTC---SSSSCEEE
T ss_pred EEEEcC-CChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCC---CcCCEEEE
Confidence 344442 444445667778888888874 8888888 5788899999 78999988
No 447
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=85.19 E-value=5.5 Score=31.98 Aligned_cols=87 Identities=8% Similarity=0.153 Sum_probs=53.9
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccchHh-----------------------HHhhcCCCC
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFAD-----------------------FADTFEANK 324 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~-----------------------~~~~~~i~~ 324 (447)
++++++.|+. .....-......|.++++++++ +.++.|+.+...+ +.+.||+
T Consensus 35 gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v-- 111 (152)
T 2lrt_A 35 GKVVLIDFTV-YNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV-- 111 (152)
T ss_dssp GSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC--
T ss_pred CCEEEEEEEc-CCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc--
Confidence 3567776765 3444455556667777776653 7777777654332 6677888
Q ss_pred CCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 325 KSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 325 ~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
...|++++++.+++. ....|. ..+.+.+...++|.
T Consensus 112 -~~~P~~~lid~~G~i~~~~~g~---------~~~e~~~~~~~~~~ 147 (152)
T 2lrt_A 112 -TNLPSVFLVNRNNELSARGENI---------KDLDEAIKKLLEGH 147 (152)
T ss_dssp -CSCSEEEEEETTTEEEEETTTC---------SCHHHHHHHHHGGG
T ss_pred -ccCceEEEECCCCeEEEecCCH---------HHHHHHHHHHHhcc
Confidence 578999999987532 233332 24556666666554
No 448
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=85.06 E-value=1 Score=34.26 Aligned_cols=71 Identities=11% Similarity=-0.058 Sum_probs=47.0
Q ss_pred cEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEecc------chHhHHhhcCCCCCCCCceEEEEeCCccceecCC
Q 013240 272 KIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK------QFADFADTFEANKKSKLPKMVVWDGNENYLTVIG 345 (447)
Q Consensus 272 ~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~------~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g 345 (447)
+.++.|+. .....-..+...|.++++.++ .+|+. ..+++++.+|+ ...|++++ ++ +. +.
T Consensus 14 ~~vV~F~A-~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V---~~~PT~~i-~G--~~--~~- 78 (106)
T 3kp8_A 14 IGGTMYGA-YWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGI---TSYPTWII-NG--RT--YT- 78 (106)
T ss_dssp HTCEEEEC-TTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTC---CSSSEEEE-TT--EE--EE-
T ss_pred CEEEEEEC-CCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCC---eEeCEEEE-CC--EE--ec-
Confidence 34555654 355566677788888887665 44554 56889999999 78999877 33 22 33
Q ss_pred CCCCCcccchhHHHHHH
Q 013240 346 SESIDEEDQGSQISRFL 362 (447)
Q Consensus 346 ~~~~~~~~~~~~i~~Fl 362 (447)
+..+.+.+.+|+
T Consensus 79 -----G~~~~~~l~~~~ 90 (106)
T 3kp8_A 79 -----GVRSLEALAVAS 90 (106)
T ss_dssp -----SCCCHHHHHHHH
T ss_pred -----CCCCHHHHHHHh
Confidence 334566787776
No 449
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=85.04 E-value=1.5 Score=37.10 Aligned_cols=43 Identities=12% Similarity=0.083 Sum_probs=32.0
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q 013240 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA 103 (447)
Q Consensus 59 ~~~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~ 103 (447)
..+..+|.|....|+||+++.+.+.++.+.. ..++|.+.--+.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~--~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQA--GEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHH--CTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHh--CCCCEEEEEEEc
Confidence 4567789999999999999999988876654 133577665553
No 450
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=83.62 E-value=2.2 Score=35.92 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=30.8
Q ss_pred CCeEEEEEECCCChhhhhhhHHH-HHHHHHhhcCCCCeEEEEEeC
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQL-DEAAPILAKLKEPIVIAKVDA 103 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~-~~~a~~l~~~~~~v~~~~Vd~ 103 (447)
.+..++.|+.+.|++|..+.+.+ .++.+.+.. .++|.+.....
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~-~~~v~~~~~~~ 54 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYID-NHKVEYQFVNL 54 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTSSEEEEEEC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhcc-CCeEEEEEEec
Confidence 46789999999999999999998 466655532 12366655543
No 451
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=83.16 E-value=2.9 Score=30.45 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=45.9
Q ss_pred CCChhhHHHHHHHHHHHHHhCCCceEEEEeccchHhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHH
Q 013240 280 DETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQIS 359 (447)
Q Consensus 280 ~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~ 359 (447)
......-+.....|.+++..+ |..+|.++.+++...+|+ . .|++++ .+++... | ..+.+.|.
T Consensus 8 a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~---~-vPtl~~--~~G~~v~--g------~~~~~~L~ 69 (87)
T 1ttz_A 8 RDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGL---R-VPVLRD--PMGRELD--W------PFDAPRLR 69 (87)
T ss_dssp CSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTT---T-CSEEEC--TTCCEEE--S------CCCHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCC---C-cCeEEE--ECCEEEe--C------CCCHHHHH
Confidence 345555566666676654433 788999988999999988 5 999877 3332211 2 23466899
Q ss_pred HHHHHHhcCc
Q 013240 360 RFLEGYREGR 369 (447)
Q Consensus 360 ~Fl~~~~~gk 369 (447)
++++..++..
T Consensus 70 ~~l~~~~~~~ 79 (87)
T 1ttz_A 70 AWLDAAPHAL 79 (87)
T ss_dssp HHHHTCC---
T ss_pred HHHHHHHHHH
Confidence 9997765543
No 452
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=83.13 E-value=4.9 Score=37.86 Aligned_cols=89 Identities=9% Similarity=0.056 Sum_probs=58.7
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccc---------------------------hHhHHhhc
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ---------------------------FADFADTF 320 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~---------------------------~~~~~~~~ 320 (447)
++++++.|+. .....-......|.++++++++ +.++.|++.+ ...+++.|
T Consensus 82 GK~vLl~F~a-twC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 82 GKVVLIDFWA-YSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCEEEEEEEC-CCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 4677776764 4555566667778888887763 7787776532 13466677
Q ss_pred CCCCCCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 321 EANKKSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 321 ~i~~~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
++ ...|++++++.+++. ..+.| ..+.+.+.++|+.++..
T Consensus 161 gV---~~~Pt~~lID~~G~Iv~~~~G------~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 161 RN---RYWPAEYLIDATGTVRHIKFG------EGDYNVTETLVRQLLND 200 (352)
T ss_dssp TC---CEESEEEEECTTSBEEEEEES------BCCHHHHHHHHHHHHHH
T ss_pred CC---CccCEEEEEeCCCeEEEEEcC------CCCHHHHHHHHHHHHhh
Confidence 77 568999999886532 22322 33467888888887753
No 453
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=82.55 E-value=3 Score=29.53 Aligned_cols=55 Identities=11% Similarity=0.176 Sum_probs=38.8
Q ss_pred EeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccch----HhHHhhcCCCCCCCCceEEE
Q 013240 278 VEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQF----ADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 278 ~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~----~~~~~~~~i~~~~~~P~vvi 333 (447)
+.......-+.....|.+++.+++++.|..+|.... .++.+.+|. .....|++.+
T Consensus 6 f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~-~~~~vP~i~~ 64 (85)
T 1ego_A 6 FGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGK-PVETVPQIFV 64 (85)
T ss_dssp ECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCC-CSCCSCEEEE
T ss_pred EeCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCC-CCceeCeEEE
Confidence 333455566777788888888877899999998654 367777872 1278999843
No 454
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=81.73 E-value=6.2 Score=30.91 Aligned_cols=37 Identities=14% Similarity=0.338 Sum_probs=24.5
Q ss_pred hcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHh
Q 013240 319 TFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 319 ~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
.||+ ...|++++++.+++... ...+.+.+.++++...
T Consensus 104 ~~~v---~~~P~~~lid~~G~i~~--------~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 104 LYDI---RATPTIYLLDGRKRVIL--------KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CSCC---CSSSEEEEECTTCBEEE--------CSCCHHHHHHHHHC--
T ss_pred HcCC---CCCCeEEEECCCCCEEe--------cCCCHHHHHHHHHHHc
Confidence 5666 67899999998764432 1245678888887653
No 455
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=81.70 E-value=1.6 Score=33.94 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=35.0
Q ss_pred hhhhhhcCCCCCCeEEEEcCCCCCcccccCCCChHHHHHHHHhh
Q 013240 207 EDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 250 (447)
Q Consensus 207 ~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~~~~~~i~~fI~~~ 250 (447)
.+++..|++...|++++|+. ++....+.|....+.+..|+...
T Consensus 66 ~~la~~~~V~g~PT~i~f~~-G~ev~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 66 PGLELARPVTFTPTFVLMAG-DVESGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp TTCBCSSCCCSSSEEEEEET-TEEEEEEECCCCHHHHHHHHHHH
T ss_pred hhHHHHCCCCCCCEEEEEEC-CEEEeeecCCCCHHHHHHHHHHH
Confidence 46788899999999999994 45555678999999999998764
No 456
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=81.17 E-value=1.6 Score=37.62 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=35.1
Q ss_pred chhhhhhCCCccccEEEEEeCCeeEE-ecCCCCHHHHHHHHHHhc
Q 013240 106 YSRLASKQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 106 ~~~l~~~~~i~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi~~~~ 149 (447)
+.+.++++||.|+|++++..+|+... ..|..+.+.+.+.+++.+
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 34567889999999999998887654 678888888888877764
No 457
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=81.83 E-value=0.32 Score=38.82 Aligned_cols=24 Identities=8% Similarity=0.358 Sum_probs=17.9
Q ss_pred HhHHhhcCCCCCCCCceEEEEeCCccc
Q 013240 314 ADFADTFEANKKSKLPKMVVWDGNENY 340 (447)
Q Consensus 314 ~~~~~~~~i~~~~~~P~vvi~~~~~~y 340 (447)
.++++.+++ ...|++++++.+++.
T Consensus 98 ~~~~~~~~v---~~~P~~~lid~~G~i 121 (143)
T 2lus_A 98 SNVTAKYGI---TGIPALVIVKKDGTL 121 (143)
Confidence 457777887 678999999976533
No 458
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=80.57 E-value=8 Score=30.40 Aligned_cols=82 Identities=10% Similarity=0.176 Sum_probs=49.1
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccch--------------------------HhHHhhcC
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF--------------------------ADFADTFE 321 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~--------------------------~~~~~~~~ 321 (447)
++++++.|.. .....-......|.++.+++++ +.++.|+.+.. .++.+.||
T Consensus 32 gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 32 GRYTLLNFWA-AYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp CCEEEEEEEC-TTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCEEEEEEEc-CcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 3566666664 3444456666778888888763 67766655421 23445566
Q ss_pred CCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHH
Q 013240 322 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 363 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~ 363 (447)
+ ...|+.++++.+++.... ....+.+.++++
T Consensus 111 v---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~ 141 (143)
T 4fo5_A 111 L---RKGFKNFLINDEGVIIAA--------NVTPEKLTEILK 141 (143)
T ss_dssp G---GGCCCEEEECTTSBEEEE--------SCCHHHHHHHHT
T ss_pred C---CCCCcEEEECCCCEEEEc--------cCCHHHHHHHHH
Confidence 6 467999999987643221 123456766664
No 459
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=80.51 E-value=1.4 Score=37.05 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=31.3
Q ss_pred chhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhc
Q 013240 106 YSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 106 ~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~ 149 (447)
+.++++++||.|+||+++ +|+. +.|..+.+.+.+.+.+..
T Consensus 138 ~~~~a~~~gv~GtPt~vv--nG~~--~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI--NGEK--VEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTEE--CSCTTCHHHHHHHHHC--
T ss_pred HHHHHHHcCCCCCCeEEE--CCEE--cCCCCCHHHHHHHHHHHH
Confidence 356788999999999987 7764 468888999988887654
No 460
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=80.49 E-value=3.8 Score=35.30 Aligned_cols=43 Identities=16% Similarity=0.211 Sum_probs=30.9
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHH-HhhcCCCCeEEEEEeC
Q 013240 60 FDYILVDFYAPWCGHCKRLAPQLDEAAP-ILAKLKEPIVIAKVDA 103 (447)
Q Consensus 60 ~~~~lV~f~~~~C~~C~~~~p~~~~~a~-~l~~~~~~v~~~~Vd~ 103 (447)
.+..+|.|....|++|+++.+......+ .+-. .++|.+.-.+.
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~-~g~v~~v~r~~ 58 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQ-PGKGAIEVRNF 58 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhcc-CCeEEEEEEeC
Confidence 4678999999999999999987755444 4422 34577765554
No 461
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=79.51 E-value=13 Score=30.06 Aligned_cols=95 Identities=7% Similarity=0.064 Sum_probs=47.5
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEeccc-----------------------hHhHHhhcCCCCCC
Q 013240 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKS 326 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~-----------------------~~~~~~~~~i~~~~ 326 (447)
++++++.|+.......-......|.+++++++++.++.|+.+. ..++.+.||+. ..
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~-~~ 122 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVY-IK 122 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCB-BT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCc-cc
Confidence 3566665554321333334445555555555445555554431 23455667762 21
Q ss_pred --C--CceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHh
Q 013240 327 --K--LPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 327 --~--~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
+ .|+.++++.+++. +.+.|. ........+.+.+.++.++
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~-~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVS-EATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECS-BTTSCCCSHHHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecC-CcCCCCCHHHHHHHHHHhh
Confidence 1 4999999987532 222221 1122234466777776654
No 462
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=78.82 E-value=11 Score=30.43 Aligned_cols=33 Identities=9% Similarity=-0.021 Sum_probs=20.5
Q ss_pred ceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 329 PKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 329 P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
|++++++.+++.. .+.| ..+.+.+.+.|+.++.
T Consensus 131 ~~~~lid~~G~i~~~~~g------~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 131 IAIYLLNPDGLFTDYYGR------SRSAEQISDSVRRHMA 164 (171)
T ss_dssp CEEEEECTTSCEEEEEES------SCCHHHHHHHHHHHHH
T ss_pred ceEEEECCCCeEEEEECC------CCCHHHHHHHHHHHHH
Confidence 3889999875332 2222 3346678888877764
No 463
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=78.22 E-value=17 Score=29.52 Aligned_cols=90 Identities=11% Similarity=0.137 Sum_probs=53.8
Q ss_pred hcCCCcEEEEEEeCCChhhHHHHH------HHHHHHHHhCCCceEEEEeccc--hHhHHhhcCCCCCCCCceEEEEeCC-
Q 013240 267 KDDKRKIVLAIVEDETEEKSQKLV------TTLKAAASANRELVFCYVGIKQ--FADFADTFEANKKSKLPKMVVWDGN- 337 (447)
Q Consensus 267 ~~~~~~~vl~~~~~~~~~~~~~~~------~~l~~~a~~~~~~~f~~vd~~~--~~~~~~~~~i~~~~~~P~vvi~~~~- 337 (447)
...+++++|.|..+ ....-+.+. ..+.++.+ .++.+..+|.+. ...+++.|++ ...|++++++.+
T Consensus 39 k~~~K~vlvd~~a~-wC~~C~~me~~vf~d~~V~~~l~--~~fv~v~~d~~~~~~~~l~~~y~v---~~~P~~~fld~~~ 112 (153)
T 2dlx_A 39 QMQNKWLMINIQNV-QDFACQCLNRDVWSNEAVKNIIR--EHFIFWQVYHDSEEGQRYIQFYKL---GDFPYVSILDPRT 112 (153)
T ss_dssp HHHTCEEEEEEECS-CTTTHHHHHHHTTTCHHHHHHHH--HTEEEEEEESSSHHHHHHHHHHTC---CSSSEEEEECTTT
T ss_pred HHcCCeEEEEEECC-CCHhHHHHHHHhcCCHHHHHHHH--cCeEEEEEecCCHhHHHHHHHcCC---CCCCEEEEEeCCC
Confidence 34567888877753 322222221 22222222 246777777754 3557888988 679999999986
Q ss_pred c-cceecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 338 E-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 338 ~-~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
+ ...... + .+.+.+.++|+.++...
T Consensus 113 G~~l~~~~------g-~~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 113 GQKLVEWH------Q-LDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp CCCCEEES------S-CCHHHHHHHHHHHHHHT
T ss_pred CcEeeecC------C-CCHHHHHHHHHHHHHhc
Confidence 4 333332 2 45778888888877543
No 464
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=77.12 E-value=15 Score=28.73 Aligned_cols=81 Identities=15% Similarity=0.205 Sum_probs=45.2
Q ss_pred CcEEEEEEeCCChhhHHHHHHHHHH---HHHhCC--CceEEEEeccchHh------------------------HHhhcC
Q 013240 271 RKIVLAIVEDETEEKSQKLVTTLKA---AASANR--ELVFCYVGIKQFAD------------------------FADTFE 321 (447)
Q Consensus 271 ~~~vl~~~~~~~~~~~~~~~~~l~~---~a~~~~--~~~f~~vd~~~~~~------------------------~~~~~~ 321 (447)
+++++.|+. .....-......|.+ +.++++ ++.++.|+.+...+ +.+.++
T Consensus 32 k~vll~F~a-~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 32 EYTLLFINN-PGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp SEEEEEECC-SSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CEEEEEEEC-CCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 555555553 344444455555555 555542 36666665543211 345566
Q ss_pred CCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHH
Q 013240 322 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 363 (447)
Q Consensus 322 i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~ 363 (447)
+ ...|++++++.+++.... ....+.|.+||+
T Consensus 111 v---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~ 141 (142)
T 3eur_A 111 L---RAIPTLYLLDKNKTVLLK--------DATLQKVEQYLA 141 (142)
T ss_dssp C---TTCSEEEEECTTCBEEEE--------EECHHHHHHHHH
T ss_pred C---CcCCeEEEECCCCcEEec--------CCCHHHHHHHHh
Confidence 6 678999999987643221 123567888775
No 465
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=76.90 E-value=9 Score=30.99 Aligned_cols=49 Identities=8% Similarity=0.005 Sum_probs=28.0
Q ss_pred hHhHHhhcCCCCCCC----CceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHh
Q 013240 313 FADFADTFEANKKSK----LPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 313 ~~~~~~~~~i~~~~~----~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
..++.+.||+ .. .|+.++++.+++. +.+.|.. ......+.+.+.++.+.
T Consensus 95 ~~~~~~~~~v---~~~~~~~P~~~lid~~G~i~~~~~g~~--~~~~~~~~il~~l~~l~ 148 (161)
T 3drn_A 95 DKKIRELYGA---KGFILPARITFVIDKKGIIRHIYNSQM--NPANHVNEALKALKQIK 148 (161)
T ss_dssp TSHHHHHTTC---CCSSSCCCEEEEECTTSBEEEEEECSS--CTTHHHHHHHHHHHHHH
T ss_pred cHHHHHHcCC---CCcCcccceEEEECCCCEEEEEEecCC--CCCcCHHHHHHHHHHhh
Confidence 3567778888 34 8999999987532 2233311 11223445556665543
No 466
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=76.79 E-value=4.8 Score=33.99 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=32.4
Q ss_pred HhHHhhcCCCC--CCCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhcCcccc
Q 013240 314 ADFADTFEANK--KSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREGRTEQ 372 (447)
Q Consensus 314 ~~~~~~~~i~~--~~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~ 372 (447)
.++.+.||+.. +...|++++++.+++.. .+.|... ...+.+.+.+.|+.+..|...+
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~--~~~~~~~l~~~l~~l~~~~~~p 175 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGS--VGRNVDEVLRVLDALQSDELCA 175 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTT--CCCCHHHHHHHHHHHHC-----
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCC--CCCCHHHHHHHHHHHhhCCCcC
Confidence 56777788710 01689999999875322 2222211 1125678999999998876544
No 467
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=76.24 E-value=12 Score=29.97 Aligned_cols=26 Identities=8% Similarity=0.159 Sum_probs=17.1
Q ss_pred hHhHHhhcCCCCC-CCCc--eEEEEeCCc
Q 013240 313 FADFADTFEANKK-SKLP--KMVVWDGNE 338 (447)
Q Consensus 313 ~~~~~~~~~i~~~-~~~P--~vvi~~~~~ 338 (447)
..++.+.||+... ...| +.++++.++
T Consensus 104 ~~~~~~~~~v~~~~~~~p~~~~~lid~~G 132 (160)
T 1xvw_A 104 HGAVSQAYGVFNEQAGIANRGTFVVDRSG 132 (160)
T ss_dssp TTHHHHHTTCEETTTTEECSEEEEECTTS
T ss_pred ChHHHHHcCCccccCCCeeeeEEEECCCC
Confidence 3557777887211 1567 899998875
No 468
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=75.89 E-value=3.1 Score=32.99 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=23.8
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~ 106 (447)
++.|+.++|++|++....+++. + +.+-.+|...+
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-----g----i~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-----E----IPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T----CCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----C----CceEEEEccCC
Confidence 5678899999999887776652 2 55556666544
No 469
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=75.89 E-value=1.7 Score=36.68 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=30.2
Q ss_pred hhhhhCCCccccEEEEEeCCeeEE-ecCCCCHHHHHHHH
Q 013240 108 RLASKQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYL 145 (447)
Q Consensus 108 ~l~~~~~i~~~Ptl~~~~~g~~~~-y~g~~~~~~i~~fi 145 (447)
+.++++||+++||+++ +|+... ..|..+.+.+.++|
T Consensus 145 ~~a~~~GV~gtPtf~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE--CCEEccCCCCCCCHHHHHHHh
Confidence 5677889999999987 787774 78899999988876
No 470
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=74.60 E-value=28 Score=28.31 Aligned_cols=39 Identities=8% Similarity=0.128 Sum_probs=27.2
Q ss_pred CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEe
Q 013240 271 RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVG 309 (447)
Q Consensus 271 ~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd 309 (447)
.++.+..|.+....--..+...+.++.+++.++.+.+.+
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~ 60 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYRE 60 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 345555555567776777778888888888777776665
No 471
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=73.82 E-value=3.8 Score=31.87 Aligned_cols=34 Identities=18% Similarity=0.418 Sum_probs=23.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~ 106 (447)
++.|+.|+|+.|++....+++ ++ +.+-.+|..++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-----~g----i~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-----HD----VVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-----TT----CCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHH-----cC----CCeEEEecccC
Confidence 456789999999998766654 22 55666665443
No 472
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=73.62 E-value=16 Score=29.46 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=37.3
Q ss_pred ccEEEeecCC-hhHHHHHHHHhhhh--------hHhHHhh--ccchhhhhhcCCCCCCeEEEEcCCCCCcccccCC
Q 013240 173 FPLFIGFGLD-ESVMSNLALKYKKK--------AWFAVAK--DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP 237 (447)
Q Consensus 173 ~~~vi~f~~~-~~~~~~~a~~~~~~--------~~f~~~~--~~~~~~~~~~~i~~~P~l~~~~~~~~~~~~~~g~ 237 (447)
.+++|.|+.+ +..++.+...+... ..|..+. ....+....+++.+.|++++++++++......|.
T Consensus 45 KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 45 KPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCS
T ss_pred CcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeCC
Confidence 4688888754 44455544433211 1122121 1123566789999999999999765554455565
No 473
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=72.90 E-value=18 Score=29.21 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=24.0
Q ss_pred CCcEEEEEEeCCChhh-HHHHHHHHHHHHHhCC-----CceEEEEecc
Q 013240 270 KRKIVLAIVEDETEEK-SQKLVTTLKAAASANR-----ELVFCYVGIK 311 (447)
Q Consensus 270 ~~~~vl~~~~~~~~~~-~~~~~~~l~~~a~~~~-----~~~f~~vd~~ 311 (447)
++++++.|.. ..... -......|.++.++++ ++.++.|+.+
T Consensus 35 gk~vll~f~~-~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d 81 (172)
T 2k6v_A 35 DKVVLLFFGF-TRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD 81 (172)
T ss_dssp TSEEEEEEEC-TTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC
T ss_pred CCEEEEEEEC-CCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC
Confidence 3566665554 33342 4555666777777766 4667777653
No 474
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=72.39 E-value=2.8 Score=32.29 Aligned_cols=33 Identities=24% Similarity=0.220 Sum_probs=22.9
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCcc
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK 105 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~ 105 (447)
++.|+.|+|+.|++....+++ ++ +.+-.+|..+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-----~g----i~~~~~di~~ 34 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-----HK----VAYDFHDYKA 34 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-----TT----CCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-----CC----CceEEEeecC
Confidence 456789999999988776665 22 5555666543
No 475
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=71.32 E-value=2.9 Score=35.25 Aligned_cols=42 Identities=17% Similarity=0.255 Sum_probs=33.1
Q ss_pred chhhhhhCCCccccEEEEEeCCee-EEecCCCCHHHHHHHHHHhc
Q 013240 106 YSRLASKQEIDAFPTLKIFMHGIP-TEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 106 ~~~l~~~~~i~~~Ptl~~~~~g~~-~~y~g~~~~~~i~~fi~~~~ 149 (447)
+.++++++||+|+|++++ +|+. +...|..+.+.+.+-+..++
T Consensus 141 ~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHHHHHHHH
Confidence 456788899999999987 7764 45789999888888777654
No 476
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=70.48 E-value=25 Score=27.98 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=19.5
Q ss_pred eEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 330 KMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 330 ~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
++++++.+++.. .+.| ..+.+.+.+.|+.++.
T Consensus 129 ~~~lid~~G~i~~~~~g------~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 129 IMYLIGPDGEFLDYFGQ------NKRKGEIAASIATHMR 161 (164)
T ss_dssp EEEEECTTSCEEEEEET------TCCHHHHHHHHHHHHG
T ss_pred eEEEECCCCeEEEEeCC------CCCHHHHHHHHHHHHH
Confidence 788898875332 2222 2345678887777653
No 477
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=70.43 E-value=17 Score=27.36 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=46.3
Q ss_pred hhHHHHHHHHH---hhcCCCCeEEEEEeCccch----------hhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHH
Q 013240 78 LAPQLDEAAPI---LAKLKEPIVIAKVDADKYS----------RLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRY 144 (447)
Q Consensus 78 ~~p~~~~~a~~---l~~~~~~v~~~~Vd~~~~~----------~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~f 144 (447)
..|++.+++.. +++. .+.+.+.|...+| ++.+++|+...|.+++ +|+.+..-..-+.++|.+|
T Consensus 25 vd~eL~~~~~~~~~lk~~--Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~V--DGevv~~G~yPt~eEl~~~ 100 (106)
T 3ktb_A 25 INPELMRIAVVIESLKKQ--GIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLV--DGEIAVSQTYPTTKQMSEW 100 (106)
T ss_dssp CCHHHHHHHHHHHHHHHT--TCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEE--TTEEEECSSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHC--CCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEEEEeccCCCHHHHHHH
Confidence 35555555443 3343 3888999998887 5677899999999875 7776665555788888888
Q ss_pred HH
Q 013240 145 LK 146 (447)
Q Consensus 145 i~ 146 (447)
+.
T Consensus 101 lg 102 (106)
T 3ktb_A 101 TG 102 (106)
T ss_dssp HC
T ss_pred hC
Confidence 73
No 478
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=70.03 E-value=5.3 Score=31.04 Aligned_cols=34 Identities=26% Similarity=0.469 Sum_probs=23.4
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~ 106 (447)
+..++.|+|+.|++....+++ ++ +.+-.+|..++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~-----~g----i~~~~~di~~~ 38 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD-----LA----WDYDAIDIKKN 38 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-----HT----CCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHH-----cC----CceEEEEeccC
Confidence 556779999999998777664 22 55556665443
No 479
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=69.46 E-value=3.9 Score=35.20 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=32.3
Q ss_pred hhhh-hhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhcC
Q 013240 107 SRLA-SKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVA 150 (447)
Q Consensus 107 ~~l~-~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~~ 150 (447)
.+.+ +++||+++|++++ +|+. +.|..+.+.+.+.|.+...
T Consensus 157 ~~~a~~~~GV~GtPtfvv--ng~~--~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 157 TDEAINQYNVSGTPSFMI--DGIL--LAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHCCCSSSEEEE--TTEE--CTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCccCCEEEE--CCEE--EeCCCCHHHHHHHHHHHhh
Confidence 3466 8899999999987 7764 6899999999988877654
No 480
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=66.61 E-value=19 Score=27.37 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=45.9
Q ss_pred hhHHHHHHHHH---hhcCCCCeEEEEEeCccch----------hhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHH
Q 013240 78 LAPQLDEAAPI---LAKLKEPIVIAKVDADKYS----------RLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRY 144 (447)
Q Consensus 78 ~~p~~~~~a~~---l~~~~~~v~~~~Vd~~~~~----------~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~f 144 (447)
..|++.+++.. |++.+ +.+.+.|...++ ++.+++|+...|.+++ +|+.+..-..-+.++|.+|
T Consensus 22 vd~~L~~~~~~~~~lk~~G--i~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V--DGevv~~G~yPt~eEl~~~ 97 (110)
T 3kgk_A 22 VDQALVDFSTDVQWLKQSG--VQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL--DGETVMAGRYPKRAELARW 97 (110)
T ss_dssp --CHHHHHHHHHHHHHHHT--CCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE--TTEEEEESSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCC--CeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEEEEeccCCCHHHHHHH
Confidence 34444444433 33333 888999998887 5677789999999875 7777665555788999988
Q ss_pred HHH
Q 013240 145 LKK 147 (447)
Q Consensus 145 i~~ 147 (447)
+.-
T Consensus 98 lgi 100 (110)
T 3kgk_A 98 FGI 100 (110)
T ss_dssp HTC
T ss_pred hCC
Confidence 864
No 481
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=63.27 E-value=3.3 Score=34.83 Aligned_cols=42 Identities=7% Similarity=0.173 Sum_probs=31.5
Q ss_pred chhhhhhCCCccccEEEEEeCCeeE-EecCCCCHHHHHHHHHHhc
Q 013240 106 YSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 106 ~~~l~~~~~i~~~Ptl~~~~~g~~~-~y~g~~~~~~i~~fi~~~~ 149 (447)
+.+.++++||.++||+++ +|+.. ...|..+.+.+.+.+...+
T Consensus 151 ~~~~a~~~gv~gtPt~~i--ng~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV--NGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE--TTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEEeccCCCCCHHHHHHHHHHHH
Confidence 456788899999999765 67543 3457778899988887764
No 482
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=63.08 E-value=6.3 Score=33.55 Aligned_cols=40 Identities=13% Similarity=0.247 Sum_probs=31.4
Q ss_pred chhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHHhc
Q 013240 106 YSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFV 149 (447)
Q Consensus 106 ~~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~~~ 149 (447)
+.+.++++||.|+|++++ +|+ .+.|....+.+.+.+.+..
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi--~g~--~~~G~~~~~~l~~~l~~~~ 195 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL--GDE--MWWGNDRLFMLESAMGRLC 195 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTE--EEESGGGHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCEEEE--CCE--EEECCCCHHHHHHHHhccc
Confidence 345678899999999887 776 5788888888888886643
No 483
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=62.58 E-value=5.8 Score=30.80 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=16.7
Q ss_pred EEEEECCCChhhhhhhHHHHH
Q 013240 64 LVDFYAPWCGHCKRLAPQLDE 84 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~ 84 (447)
+..++.|+|+.|++....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456779999999998766654
No 484
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=62.18 E-value=14 Score=30.74 Aligned_cols=53 Identities=9% Similarity=0.054 Sum_probs=31.6
Q ss_pred HhHHhhcCCCC---CCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 314 ADFADTFEANK---KSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 314 ~~~~~~~~i~~---~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
.++++.||+.. +...|++++++.+++. +.+.|.... ..+.+.+.+.++.+...
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~--~~~~~~l~~~l~~l~~~ 158 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGI--GRDASTLINKVKAAQYV 158 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTS--CCCTTHHHHHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCC--CCCHHHHHHHHHHHhhh
Confidence 56777888720 0168999999987532 222232111 12456888888887763
No 485
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=60.93 E-value=33 Score=27.33 Aligned_cols=35 Identities=3% Similarity=-0.062 Sum_probs=19.0
Q ss_pred CceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHH
Q 013240 328 LPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGY 365 (447)
Q Consensus 328 ~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~ 365 (447)
.|+.++++.+++.. .+.+. ......+.+.+.++.+
T Consensus 125 ~p~~~lid~~G~i~~~~~~~---~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 125 ERSTFLLSPEGQVVQAWRKV---KVAGHADAVLAALKAH 160 (163)
T ss_dssp CCEEEEECTTSCEEEEECSC---CSTTHHHHHHHHHHHH
T ss_pred ceEEEEECCCCeEEEEEcCC---CcccCHHHHHHHHHHH
Confidence 79999999876332 22221 1122345566666554
No 486
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=60.53 E-value=34 Score=27.64 Aligned_cols=40 Identities=8% Similarity=0.035 Sum_probs=23.0
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEec
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGI 310 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~ 310 (447)
.++++++.|+.. ....-. ....|.++.+++++ +.++.|+.
T Consensus 31 ~Gk~vll~F~a~-wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~ 72 (171)
T 3cmi_A 31 KGKVVLIVNVAS-KCGFTP-QYKELEALYKRYKDEGFTIIGFPC 72 (171)
T ss_dssp TTCEEEEEEEES-SSCCHH-HHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred CCCEEEEEEEec-CCCcch-hHHHHHHHHHHhccCCeEEEEEEC
Confidence 346777777653 333334 45566677666653 66766654
No 487
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=60.24 E-value=47 Score=27.40 Aligned_cols=93 Identities=12% Similarity=0.049 Sum_probs=52.1
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEeccc-----------hHhHH-hhcCCC-----------
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-----------FADFA-DTFEAN----------- 323 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~-----------~~~~~-~~~~i~----------- 323 (447)
.++++++.|.. .....-......|.++.+++++ +.++.|+.++ ..+|+ +.+++.
T Consensus 47 ~Gk~vll~F~a-twC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVA-SKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEEC-SSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEec-CCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 34677776664 3343444455666667666653 7777776541 23455 333220
Q ss_pred ---------------CCCCCc------eEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 324 ---------------KKSKLP------KMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 324 ---------------~~~~~P------~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
.....| +.++++.+++.. .+. +..+.+.+.+.|+.++..
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~------g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFS------PGASVKDIEKKLIPLLES 186 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEEC------TTCCHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEEC------CCCCHHHHHHHHHHHHhh
Confidence 012356 788888865332 222 234467888888888754
No 488
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=60.01 E-value=6.6 Score=29.55 Aligned_cols=60 Identities=23% Similarity=0.196 Sum_probs=48.1
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEE
Q 013240 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~ 122 (447)
.+.|-.|-+-.-+.+.+......++-+... +.++.+-.||..++|++++.++|-.+||++
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l--~~~y~LeVIDv~~~PelAe~~~IvAtPTLi 66 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEF--QGVYALKVIDVLKNPQLAEEDKILATPTLA 66 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHH--TTSEEEEEEETTTCCSCCTTCEEECHHHHG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhc--CCCeEEEEEEcccCHhHHhHCCeEEechhh
Confidence 355666666577788888888888766554 346999999999999999999999999976
No 489
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=59.32 E-value=31 Score=28.97 Aligned_cols=51 Identities=8% Similarity=0.153 Sum_probs=29.7
Q ss_pred HhHHhhcCCCCC---CCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHh
Q 013240 314 ADFADTFEANKK---SKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYR 366 (447)
Q Consensus 314 ~~~~~~~~i~~~---~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~ 366 (447)
.++.+.||+... ...|++++++.+++.. ...|.. ....+.+++.+.++.+.
T Consensus 110 ~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~--~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 110 KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDL--PVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp CHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT--TBCCCHHHHHHHHHHHH
T ss_pred hHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCC--CCCCCHHHHHHHHHHhh
Confidence 456677777200 1689999999875322 222211 11234577888888776
No 490
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=59.04 E-value=28 Score=29.91 Aligned_cols=53 Identities=8% Similarity=0.083 Sum_probs=31.9
Q ss_pred HhHHhhcCCCC---CCCCceEEEEeCCcccee-cCCCCCCCcccchhHHHHHHHHHhcC
Q 013240 314 ADFADTFEANK---KSKLPKMVVWDGNENYLT-VIGSESIDEEDQGSQISRFLEGYREG 368 (447)
Q Consensus 314 ~~~~~~~~i~~---~~~~P~vvi~~~~~~y~~-~~g~~~~~~~~~~~~i~~Fl~~~~~g 368 (447)
.++.+.||+.. +...|++++++.+++... ..|. .....+.+++.+.|+.+...
T Consensus 130 ~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~--~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 130 KQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVND--LPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC--TTCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecC--CCCCCCHHHHHHHHHHhhhh
Confidence 45777788710 116899999998753222 2221 12223567888888888754
No 491
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=59.00 E-value=41 Score=26.78 Aligned_cols=36 Identities=8% Similarity=-0.105 Sum_probs=23.1
Q ss_pred CceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhcCc
Q 013240 328 LPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREGR 369 (447)
Q Consensus 328 ~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~gk 369 (447)
.|..++++.+++.. .+.| ..+.+.+.+.|+.++.+|
T Consensus 133 ~P~~~lid~~G~i~~~~~g------~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 133 NFSKFLVDRQGQPVKRYSP------TTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp TTCEEEECTTSCEEEEECT------TSCGGGGHHHHHHHHHCC
T ss_pred cceEEEECCCCCEEEEcCC------CCCHHHHHHHHHHHhccC
Confidence 47889998875332 2332 234567888888877654
No 492
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=58.06 E-value=6.1 Score=33.69 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=33.3
Q ss_pred HhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhcCccccccccC
Q 013240 314 ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAG 377 (447)
Q Consensus 314 ~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl~~~~ks~ 377 (447)
...++.+|+ .+.|+++| +++|..-. +.++.+++.+|+++++. +.++++++
T Consensus 40 ~~~a~~~gi---~gvP~fvi---ngk~~~~~------~~~~~~~~~~f~~~~~~--l~~~L~s~ 89 (197)
T 1un2_A 40 EKAAADVQL---RGVPAMFV---NGKYQLNP------QGMDTSNMDVFVQQYAD--TVKYLSEK 89 (197)
T ss_dssp HHHHHHTTC---CSSSEEEE---TTTEEECG------GGSCCSSHHHHHHHHHH--HHHHHTC-
T ss_pred HHHHHHcCC---CcCCEEEE---cceEecCc------cccccccHHHHHHHHHH--HHHHHHhC
Confidence 456678899 56999876 44554321 22334578888888888 77777776
No 493
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=55.86 E-value=24 Score=26.95 Aligned_cols=36 Identities=25% Similarity=0.536 Sum_probs=27.3
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q 013240 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA 103 (447)
Q Consensus 61 ~~~lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~ 103 (447)
+..+|.|-.|.|+-|+-....+.++. ++-.+.+||.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~le-------deY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELK-------SEYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTT-------TTEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhh-------ccccEEEEEe
Confidence 46799999999999988776663332 3367788886
No 494
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=60.74 E-value=2.4 Score=34.30 Aligned_cols=49 Identities=10% Similarity=0.139 Sum_probs=29.4
Q ss_pred HhHHhhcCCCCCCCCceEEEEeCCccce-ecCCCCCCCcccchhHHHHHHHHHhcCcc
Q 013240 314 ADFADTFEANKKSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREGRT 370 (447)
Q Consensus 314 ~~~~~~~~i~~~~~~P~vvi~~~~~~y~-~~~g~~~~~~~~~~~~i~~Fl~~~~~gkl 370 (447)
..+.+.||+ .....|++++++.+++.. ...| .+.+.+.++++.+..+.-
T Consensus 102 ~~~~~~~~~-~~~~~P~~~lid~~G~i~~~~~g-------~~~~~l~~~l~~l~~~~~ 151 (159)
T 2ls5_A 102 ADIFAKYAL-RDAGITRNVLIDREGKIVKLTRL-------YNEEEFASLVQQINEMLK 151 (159)
Confidence 455666775 335689999998865322 2222 234467777777766543
No 495
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=55.68 E-value=50 Score=24.53 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=54.6
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCCccccEEEEE-eCCeeEEe-cCCCCHHHH
Q 013240 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF-MHGIPTEY-YGPRKAELL 141 (447)
Q Consensus 64 lV~f~~~~C~~C~~~~p~~~~~a~~l~~~~~~v~~~~Vd~~~~~~l~~~~~i~~~Ptl~~~-~~g~~~~y-~g~~~~~~i 141 (447)
|...|.+|.+.++..+..|..-...++..++.+.|...-|. ..-|.+... .+|..... -...+.++|
T Consensus 22 l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v~~~~-----------~~~P~i~a~Y~~G~ek~i~l~n~s~~eI 90 (102)
T 1s3a_A 22 IRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECS-----------DVQPKLWARYAFGQETNVPLNNFSADQV 90 (102)
T ss_dssp EEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEEECCC-----------SSSCEEEEEESSCCEEEEECTTCCHHHH
T ss_pred EEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEEEECC-----------CCCCEEEEEECCCCEEEEECCCCCHHHH
Confidence 66677899999999999988888888877787877654432 146888764 56754443 344788999
Q ss_pred HHHHHHhc
Q 013240 142 VRYLKKFV 149 (447)
Q Consensus 142 ~~fi~~~~ 149 (447)
.+.+..+.
T Consensus 91 ~~~l~~l~ 98 (102)
T 1s3a_A 91 TRALENVL 98 (102)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887764
No 496
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=55.40 E-value=10 Score=31.85 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=31.2
Q ss_pred HhHHhhcCCCC--CCCCceEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 314 ADFADTFEANK--KSKLPKMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 314 ~~~~~~~~i~~--~~~~P~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
.++.+.||+.. +...|+.++++.+++. +.+.|.. ....+.+.+.+.++.+..
T Consensus 107 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~--~~~~~~~~l~~~l~~l~~ 161 (198)
T 1zof_A 107 KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDL--PLGRNADEMLRMVDALLH 161 (198)
T ss_dssp SHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESS--SCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCC--CCCCCHHHHHHHHHHHHH
Confidence 56778888810 0168999999987532 2222221 112356788888888763
No 497
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=55.25 E-value=51 Score=28.69 Aligned_cols=87 Identities=6% Similarity=0.099 Sum_probs=51.8
Q ss_pred CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCceEEEEecc---------------------------------------
Q 013240 271 RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK--------------------------------------- 311 (447)
Q Consensus 271 ~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~--------------------------------------- 311 (447)
.+..+..|.+....--.++...+.++.+. .+++|.++...
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~~ 175 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS-GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPA 175 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT-TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCCS
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC-CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCccc
Confidence 45555556566777667777777776665 24666654321
Q ss_pred -----------chHhHHhhcCCCCCCCCceEEEEeCCccceecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 312 -----------QFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 312 -----------~~~~~~~~~~i~~~~~~P~vvi~~~~~~y~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
...++.+.+|+ ...|++++.+.++++....| ....+.+.++|+....
T Consensus 176 ~~~~~~~~~v~~~~~l~~~~gv---~gtPt~vi~~~~G~~~~~~G------~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 176 NVSTEQMKVLSDNEKLMDDLGA---NVTPAIYYMSKENTLQQAVG------LPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTC---CSSCEEEEEETTTEEEEEES------SCCHHHHHHHTTC---
T ss_pred cCCHHHHHHHHHHHHHHHHcCC---CCCCEEEEECCCCCEEEecC------CCCHHHHHHHHHHHHH
Confidence 12334567788 77899999886655544444 2345677777765543
No 498
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=53.93 E-value=13 Score=25.83 Aligned_cols=50 Identities=10% Similarity=0.093 Sum_probs=32.6
Q ss_pred CChhhHHHHHHHHHHHHHhCCC-ceEEEEecc-chHhHHhhcCCCCCCCCceEEE
Q 013240 281 ETEEKSQKLVTTLKAAASANRE-LVFCYVGIK-QFADFADTFEANKKSKLPKMVV 333 (447)
Q Consensus 281 ~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~-~~~~~~~~~~i~~~~~~P~vvi 333 (447)
.....-+.....+.+++.++.. +.+..+|.+ +..+.++.+|+ ...|++++
T Consensus 10 ~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv---~~vPt~~i 61 (80)
T 2k8s_A 10 AGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGV---KSVPALVI 61 (80)
T ss_dssp CSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTC---CEEEEEEE
T ss_pred CCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCC---CcCCEEEE
Confidence 4555566667777777666542 444444432 45777888888 67999877
No 499
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=53.08 E-value=83 Score=24.89 Aligned_cols=92 Identities=9% Similarity=0.082 Sum_probs=51.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--ceEEEEecc-----------chHhHHh-hcCCC-----------
Q 013240 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIK-----------QFADFAD-TFEAN----------- 323 (447)
Q Consensus 269 ~~~~~vl~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~-----------~~~~~~~-~~~i~----------- 323 (447)
.++++++.|.. .....-......|.++++++++ +.++.|+.+ ...++++ .++++
T Consensus 31 ~gk~vll~f~a-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVA-SKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEEC-SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEe-ccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 34666666664 3444444555667777766653 777777653 1234555 43320
Q ss_pred -----------------CCCCCc---eEEEEeCCccc-eecCCCCCCCcccchhHHHHHHHHHhc
Q 013240 324 -----------------KKSKLP---KMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYRE 367 (447)
Q Consensus 324 -----------------~~~~~P---~vvi~~~~~~y-~~~~g~~~~~~~~~~~~i~~Fl~~~~~ 367 (447)
.....| +.++++.+++. +.+.| ..+.+.+.+.|+.++.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g------~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYP------TTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECT------TSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCC------CCCHHHHHHHHHHHhh
Confidence 003457 88899886533 22332 3345678888887764
No 500
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=52.54 E-value=11 Score=32.07 Aligned_cols=37 Identities=14% Similarity=0.301 Sum_probs=28.9
Q ss_pred hhhhhhCCCccccEEEEEeCCeeEEecCCCCHHHHHHHHHH
Q 013240 107 SRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKK 147 (447)
Q Consensus 107 ~~l~~~~~i~~~Ptl~~~~~g~~~~y~g~~~~~~i~~fi~~ 147 (447)
.+.+.+.||.|+|++++ +|+ .+.|....+.+.+++..
T Consensus 163 ~~~a~~~Gv~GvPtfvv--~g~--~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDAVARGIFGSPFFLV--DDE--PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHTTCCSSSEEEE--TTE--EEESGGGHHHHHHHHHT
T ss_pred HHHHHHCCCCcCCEEEE--CCE--EEecCCCHHHHHHHHhc
Confidence 45677899999999987 665 57788888888777754
Done!