Query 013242
Match_columns 447
No_of_seqs 355 out of 2486
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 01:51:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013242.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013242hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 2.3E-97 5E-102 744.9 29.3 437 1-447 327-942 (942)
2 COG0474 MgtA Cation transport 100.0 5.9E-69 1.3E-73 594.9 33.6 366 1-367 348-752 (917)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 4.2E-64 9.1E-69 548.0 34.0 344 1-354 286-631 (755)
4 KOG0202 Ca2+ transporting ATPa 100.0 1.3E-64 2.9E-69 523.1 27.5 353 1-354 332-776 (972)
5 PRK15122 magnesium-transportin 100.0 7.8E-63 1.7E-67 545.4 33.4 346 1-354 369-735 (903)
6 PRK10517 magnesium-transportin 100.0 1.1E-62 2.4E-67 543.5 32.9 346 1-354 371-735 (902)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 6.5E-62 1.4E-66 537.2 34.3 346 1-354 336-700 (867)
8 TIGR01523 ATPase-IID_K-Na pota 100.0 1.4E-61 3E-66 541.2 30.6 353 1-354 359-849 (1053)
9 KOG0204 Calcium transporting A 100.0 7.7E-62 1.7E-66 502.2 24.6 352 2-354 436-837 (1034)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 1.2E-60 2.6E-65 532.6 31.7 351 1-354 376-767 (941)
11 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2.8E-59 6E-64 523.3 33.7 353 1-354 344-782 (997)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1.8E-58 3.9E-63 513.5 30.5 352 1-354 289-728 (917)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1.2E-58 2.6E-63 521.2 27.7 350 1-354 448-895 (1054)
14 TIGR01522 ATPase-IIA2_Ca golgi 100.0 4.8E-57 1E-61 500.9 31.1 343 1-354 324-716 (884)
15 TIGR01652 ATPase-Plipid phosph 100.0 5.2E-56 1.1E-60 501.0 26.9 331 1-333 359-844 (1057)
16 PRK14010 potassium-transportin 100.0 1.5E-54 3.3E-59 460.5 26.3 275 1-328 298-573 (673)
17 PLN03190 aminophospholipid tra 100.0 3E-54 6.6E-59 484.0 28.4 326 1-328 453-941 (1178)
18 PRK01122 potassium-transportin 100.0 2.8E-53 6.1E-58 451.2 27.8 276 1-328 298-577 (679)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 2.8E-53 6.1E-58 438.3 17.6 352 2-354 367-804 (1019)
20 TIGR01497 kdpB K+-transporting 100.0 2.5E-50 5.3E-55 427.9 26.4 277 1-328 299-578 (675)
21 COG2217 ZntA Cation transport 100.0 7.4E-50 1.6E-54 425.1 25.8 306 1-374 405-710 (713)
22 KOG0206 P-type ATPase [General 100.0 1.3E-49 2.9E-54 434.2 19.9 326 1-328 387-864 (1151)
23 KOG0207 Cation transport ATPas 100.0 7.4E-48 1.6E-52 403.5 24.0 324 1-378 582-906 (951)
24 KOG0208 Cation transport ATPas 100.0 1.1E-47 2.4E-52 402.3 19.4 256 69-327 600-919 (1140)
25 KOG0210 P-type ATPase [Inorgan 100.0 3.2E-48 7E-53 392.3 12.0 280 67-352 536-877 (1051)
26 PRK11033 zntA zinc/cadmium/mer 100.0 4.7E-44 1E-48 389.5 25.7 299 1-372 436-737 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 2.7E-43 5.9E-48 370.2 25.4 251 1-337 230-481 (499)
28 KOG0209 P-type ATPase [Inorgan 100.0 3.5E-42 7.6E-47 354.3 15.2 282 1-286 479-834 (1160)
29 PRK10671 copA copper exporting 100.0 1.3E-40 2.8E-45 368.6 28.5 310 1-372 517-828 (834)
30 TIGR01525 ATPase-IB_hvy heavy 100.0 1.2E-39 2.6E-44 346.2 27.2 280 1-340 246-530 (556)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 2.4E-39 5.2E-44 343.4 26.2 266 1-334 277-543 (562)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.7E-38 3.8E-43 335.6 23.1 261 1-340 246-509 (536)
33 COG2216 KdpB High-affinity K+ 100.0 1.6E-38 3.4E-43 314.3 14.4 265 1-316 299-567 (681)
34 PF00702 Hydrolase: haloacid d 100.0 4.7E-29 1E-33 232.7 10.6 211 1-278 1-215 (215)
35 COG4087 Soluble P-type ATPase 99.7 4.6E-16 9.9E-21 129.0 11.4 123 156-309 20-145 (152)
36 PRK10513 sugar phosphate phosp 99.4 5.7E-13 1.2E-17 129.2 8.3 67 246-312 196-266 (270)
37 PRK01158 phosphoglycolate phos 99.4 1.3E-12 2.8E-17 123.6 10.5 153 159-311 12-226 (230)
38 COG0561 Cof Predicted hydrolas 99.4 3.3E-12 7.1E-17 123.5 12.0 154 159-312 12-259 (264)
39 PRK15126 thiamin pyrimidine py 99.4 2.4E-12 5.2E-17 125.1 10.9 146 166-311 19-259 (272)
40 PRK10976 putative hydrolase; P 99.4 3.8E-12 8.3E-17 123.2 11.1 66 246-311 190-261 (266)
41 PRK11133 serB phosphoserine ph 99.3 3.7E-12 8.1E-17 126.1 9.8 131 166-311 181-316 (322)
42 TIGR02137 HSK-PSP phosphoserin 99.3 1.2E-11 2.6E-16 114.9 11.9 131 166-313 68-198 (203)
43 TIGR01487 SPP-like sucrose-pho 99.3 9.7E-12 2.1E-16 116.6 9.4 145 166-310 18-215 (215)
44 TIGR01482 SPP-subfamily Sucros 99.3 8.9E-12 1.9E-16 117.3 8.9 146 166-311 15-222 (225)
45 PLN02887 hydrolase family prot 99.2 2.1E-11 4.5E-16 129.1 9.5 66 246-311 507-576 (580)
46 PF08282 Hydrolase_3: haloacid 99.2 3.1E-11 6.7E-16 114.6 8.8 147 164-310 13-254 (254)
47 PRK10530 pyridoxal phosphate ( 99.2 7.9E-11 1.7E-15 114.2 11.3 66 246-311 199-268 (272)
48 TIGR02726 phenyl_P_delta pheny 99.2 4.6E-11 1E-15 107.4 8.6 104 173-306 41-146 (169)
49 COG0560 SerB Phosphoserine pho 99.1 1.8E-10 3.9E-15 107.6 10.1 122 165-301 76-202 (212)
50 TIGR00338 serB phosphoserine p 99.1 2E-10 4.2E-15 107.8 10.3 129 166-309 85-218 (219)
51 TIGR01670 YrbI-phosphatas 3-de 99.1 1.5E-10 3.3E-15 102.8 8.6 105 174-310 36-145 (154)
52 TIGR00099 Cof-subfamily Cof su 99.1 1.7E-10 3.6E-15 111.1 8.6 65 246-310 188-256 (256)
53 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 6.8E-10 1.5E-14 107.0 10.9 66 246-311 176-253 (256)
54 COG1778 Low specificity phosph 99.0 6.6E-10 1.4E-14 95.8 7.6 114 174-319 43-164 (170)
55 PRK03669 mannosyl-3-phosphogly 99.0 1.3E-09 2.7E-14 106.1 10.4 66 246-311 187-265 (271)
56 PRK09484 3-deoxy-D-manno-octul 99.0 2.4E-09 5.2E-14 97.9 9.7 113 173-317 55-175 (183)
57 PRK00192 mannosyl-3-phosphogly 98.9 3.5E-09 7.5E-14 103.1 9.9 67 246-312 190-268 (273)
58 PF13246 Hydrolase_like2: Puta 98.9 2.1E-09 4.6E-14 86.6 6.6 64 48-112 20-89 (91)
59 PRK13582 thrH phosphoserine ph 98.9 1.7E-08 3.6E-13 93.6 11.9 129 166-312 68-197 (205)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.8 1.7E-08 3.6E-13 93.1 8.8 117 166-295 80-200 (201)
61 TIGR02471 sucr_syn_bact_C sucr 98.7 4.2E-08 9.2E-13 93.3 9.6 67 246-312 159-233 (236)
62 KOG1615 Phosphoserine phosphat 98.7 2.1E-08 4.6E-13 89.4 6.7 122 167-298 89-215 (227)
63 TIGR03333 salvage_mtnX 2-hydro 98.6 2.5E-07 5.4E-12 86.7 11.4 137 165-311 69-209 (214)
64 TIGR01485 SPP_plant-cyano sucr 98.6 1.1E-07 2.4E-12 91.2 8.9 148 165-312 20-245 (249)
65 PLN02954 phosphoserine phospha 98.5 4.5E-07 9.7E-12 85.3 10.4 132 166-309 84-222 (224)
66 PF12710 HAD: haloacid dehalog 98.5 1.2E-07 2.5E-12 86.7 6.0 92 169-275 92-192 (192)
67 PLN02382 probable sucrose-phos 98.5 3.9E-07 8.5E-12 93.6 9.6 146 167-312 29-258 (413)
68 PRK09552 mtnX 2-hydroxy-3-keto 98.5 7.7E-07 1.7E-11 83.7 10.2 135 166-310 74-212 (219)
69 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.4 6.1E-07 1.3E-11 83.0 7.8 107 165-284 86-197 (202)
70 TIGR01488 HAD-SF-IB Haloacid D 98.4 4.6E-07 9.9E-12 81.8 6.7 100 167-277 74-177 (177)
71 TIGR01489 DKMTPPase-SF 2,3-dik 98.4 1.1E-06 2.3E-11 80.0 8.3 111 165-282 71-186 (188)
72 PRK13222 phosphoglycolate phos 98.4 2.8E-06 6.1E-11 79.8 11.0 126 165-313 92-224 (226)
73 TIGR02461 osmo_MPG_phos mannos 98.3 1.7E-06 3.7E-11 81.7 8.4 44 164-207 13-56 (225)
74 COG0546 Gph Predicted phosphat 98.3 3.5E-06 7.6E-11 79.3 10.5 126 164-310 87-217 (220)
75 PRK10187 trehalose-6-phosphate 98.3 2.7E-06 5.9E-11 82.4 9.8 140 166-311 36-241 (266)
76 TIGR01454 AHBA_synth_RP 3-amin 98.3 5.3E-06 1.1E-10 77.0 10.1 124 166-310 75-203 (205)
77 TIGR02463 MPGP_rel mannosyl-3- 98.3 4.1E-06 9E-11 78.6 9.4 40 167-206 17-56 (221)
78 cd01427 HAD_like Haloacid deha 98.2 5E-06 1.1E-10 70.5 8.3 118 162-282 20-138 (139)
79 PRK11590 hypothetical protein; 98.1 1.6E-05 3.5E-10 74.3 10.4 103 166-284 95-202 (211)
80 PRK08238 hypothetical protein; 98.1 1.6E-05 3.4E-10 83.1 10.7 100 166-290 72-171 (479)
81 PRK13288 pyrophosphatase PpaX; 98.1 1.6E-05 3.5E-10 74.2 9.7 123 167-310 83-210 (214)
82 PRK13223 phosphoglycolate phos 98.1 2.3E-05 4.9E-10 76.3 10.1 126 165-311 100-230 (272)
83 TIGR01449 PGP_bact 2-phosphogl 98.0 2.3E-05 5.1E-10 72.8 9.4 122 166-308 85-211 (213)
84 PRK12702 mannosyl-3-phosphogly 98.0 3.4E-05 7.3E-10 74.7 10.2 43 165-207 17-59 (302)
85 PRK10826 2-deoxyglucose-6-phos 98.0 4.1E-05 8.9E-10 71.9 9.7 122 165-307 91-216 (222)
86 TIGR03351 PhnX-like phosphonat 98.0 5.6E-05 1.2E-09 70.8 10.3 125 165-309 86-218 (220)
87 TIGR01545 YfhB_g-proteo haloac 97.9 4.6E-05 1E-09 71.2 9.6 106 166-284 94-201 (210)
88 PRK13226 phosphoglycolate phos 97.9 6.7E-05 1.5E-09 71.0 9.7 125 166-311 95-225 (229)
89 PRK13478 phosphonoacetaldehyde 97.9 0.00016 3.4E-09 70.1 12.3 97 166-280 101-198 (267)
90 PRK14502 bifunctional mannosyl 97.9 4.3E-05 9.4E-10 81.7 8.7 40 167-206 434-473 (694)
91 TIGR01422 phosphonatase phosph 97.8 0.00014 3E-09 69.8 11.0 97 166-280 99-196 (253)
92 TIGR01484 HAD-SF-IIB HAD-super 97.8 6.6E-05 1.4E-09 69.5 7.8 39 166-204 17-55 (204)
93 TIGR01544 HAD-SF-IE haloacid d 97.8 0.00026 5.6E-09 68.5 11.4 134 165-311 120-274 (277)
94 PRK14501 putative bifunctional 97.8 0.00011 2.4E-09 81.2 10.1 61 245-311 656-721 (726)
95 KOG4383 Uncharacterized conser 97.7 0.00022 4.8E-09 74.6 10.9 176 153-328 813-1094(1354)
96 PRK13225 phosphoglycolate phos 97.7 0.00025 5.4E-09 69.0 10.4 121 166-310 142-267 (273)
97 PLN03243 haloacid dehalogenase 97.7 0.00026 5.7E-09 68.4 10.1 120 166-306 109-230 (260)
98 PLN02770 haloacid dehalogenase 97.6 0.00036 7.8E-09 66.9 10.3 117 166-301 108-228 (248)
99 PRK06698 bifunctional 5'-methy 97.6 0.00025 5.4E-09 74.3 9.3 124 166-313 330-456 (459)
100 PF05116 S6PP: Sucrose-6F-phos 97.5 0.00015 3.2E-09 69.6 6.3 67 245-311 164-243 (247)
101 TIGR01548 HAD-SF-IA-hyp1 haloa 97.5 0.00024 5.1E-09 65.5 6.5 93 165-277 105-197 (197)
102 PHA02530 pseT polynucleotide k 97.4 0.00069 1.5E-08 66.7 9.5 109 162-281 183-292 (300)
103 PRK11587 putative phosphatase; 97.4 0.00068 1.5E-08 63.5 9.0 115 166-300 83-199 (218)
104 PRK11009 aphA acid phosphatase 97.4 0.00048 1E-08 65.4 7.9 89 166-280 114-206 (237)
105 PRK14988 GMP/IMP nucleotidase; 97.4 0.00064 1.4E-08 64.1 8.1 101 166-285 93-195 (224)
106 TIGR01672 AphA HAD superfamily 97.4 0.00041 8.8E-09 65.9 6.7 89 166-280 114-206 (237)
107 PTZ00174 phosphomannomutase; P 97.4 0.0002 4.4E-09 68.6 4.7 60 239-298 179-245 (247)
108 PF13419 HAD_2: Haloacid dehal 97.3 0.0003 6.6E-09 62.4 5.2 97 166-281 77-173 (176)
109 TIGR01428 HAD_type_II 2-haloal 97.3 0.00085 1.8E-08 61.7 8.3 98 166-282 92-189 (198)
110 PLN02575 haloacid dehalogenase 97.3 0.0017 3.6E-08 65.8 10.6 120 166-306 216-337 (381)
111 PRK06769 hypothetical protein; 97.3 0.0007 1.5E-08 61.2 7.1 98 167-282 29-134 (173)
112 PRK08942 D,D-heptose 1,7-bisph 97.3 0.0018 3.9E-08 58.8 9.6 126 167-311 30-177 (181)
113 TIGR02253 CTE7 HAD superfamily 97.3 0.0009 2E-08 62.5 7.8 100 166-284 94-195 (221)
114 TIGR01662 HAD-SF-IIIA HAD-supe 97.2 0.001 2.3E-08 56.9 7.2 92 166-280 25-126 (132)
115 COG4030 Uncharacterized protei 97.2 0.003 6.6E-08 58.2 9.9 146 166-312 83-263 (315)
116 PLN02779 haloacid dehalogenase 97.2 0.0016 3.5E-08 63.8 8.9 117 166-300 144-264 (286)
117 COG4359 Uncharacterized conser 97.1 0.00092 2E-08 59.7 6.0 106 166-283 73-184 (220)
118 TIGR02254 YjjG/YfnB HAD superf 97.1 0.0014 3E-08 61.2 7.5 121 166-308 97-222 (224)
119 smart00775 LNS2 LNS2 domain. T 97.1 0.0044 9.6E-08 55.1 10.3 103 164-280 25-141 (157)
120 TIGR01990 bPGM beta-phosphoglu 97.1 0.0011 2.4E-08 59.9 6.1 94 166-280 87-180 (185)
121 TIGR01509 HAD-SF-IA-v3 haloaci 97.1 0.0026 5.6E-08 57.2 8.4 95 166-280 85-179 (183)
122 TIGR02009 PGMB-YQAB-SF beta-ph 97.0 0.0013 2.8E-08 59.5 6.1 92 166-280 88-181 (185)
123 PLN02580 trehalose-phosphatase 97.0 0.0027 5.9E-08 64.2 8.4 68 240-311 292-374 (384)
124 PRK09449 dUMP phosphatase; Pro 96.8 0.0043 9.3E-08 58.1 8.2 123 166-310 95-222 (224)
125 TIGR01685 MDP-1 magnesium-depe 96.8 0.0068 1.5E-07 54.8 8.7 112 156-283 35-155 (174)
126 TIGR01261 hisB_Nterm histidino 96.8 0.004 8.6E-08 55.6 6.9 100 166-283 29-145 (161)
127 PLN02940 riboflavin kinase 96.8 0.0041 8.9E-08 63.5 7.9 116 166-300 93-212 (382)
128 PF06888 Put_Phosphatase: Puta 96.8 0.016 3.5E-07 54.9 11.3 130 117-272 42-183 (234)
129 TIGR01656 Histidinol-ppas hist 96.8 0.0035 7.6E-08 55.0 6.4 98 166-281 27-141 (147)
130 TIGR00213 GmhB_yaeD D,D-heptos 96.7 0.0043 9.3E-08 56.1 7.0 123 167-299 27-169 (176)
131 TIGR02252 DREG-2 REG-2-like, H 96.7 0.0051 1.1E-07 56.7 7.4 95 166-280 105-200 (203)
132 TIGR01668 YqeG_hyp_ppase HAD s 96.7 0.0055 1.2E-07 55.2 7.2 87 166-280 43-131 (170)
133 TIGR01549 HAD-SF-IA-v1 haloaci 96.7 0.0039 8.5E-08 54.7 6.0 90 167-278 65-154 (154)
134 TIGR01533 lipo_e_P4 5'-nucleot 96.4 0.014 3E-07 56.4 8.7 86 164-274 116-204 (266)
135 smart00577 CPDc catalytic doma 96.4 0.0046 1E-07 54.3 4.8 97 165-283 44-140 (148)
136 PLN02811 hydrolase 96.4 0.015 3.3E-07 54.4 8.7 118 166-300 78-202 (220)
137 KOG3120 Predicted haloacid deh 96.3 0.011 2.5E-07 54.4 7.0 142 117-284 55-209 (256)
138 PLN02205 alpha,alpha-trehalose 96.3 0.015 3.3E-07 65.1 9.5 37 166-202 616-653 (854)
139 TIGR01675 plant-AP plant acid 96.3 0.013 2.7E-07 55.3 7.4 88 165-272 119-210 (229)
140 TIGR01691 enolase-ppase 2,3-di 96.3 0.014 3E-07 54.9 7.4 99 164-283 93-194 (220)
141 PRK10563 6-phosphogluconate ph 96.2 0.0079 1.7E-07 56.2 5.4 97 166-283 88-184 (221)
142 TIGR01681 HAD-SF-IIIC HAD-supe 96.2 0.02 4.3E-07 49.0 7.3 39 166-204 29-68 (128)
143 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.1 0.028 6.2E-07 53.5 8.9 48 159-206 17-66 (242)
144 PLN02919 haloacid dehalogenase 96.0 0.03 6.4E-07 64.5 9.8 117 166-300 161-281 (1057)
145 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.031 6.6E-07 50.2 7.9 94 167-281 43-158 (166)
146 TIGR00685 T6PP trehalose-phosp 95.9 0.0089 1.9E-07 57.1 4.2 63 244-310 165-239 (244)
147 PRK05446 imidazole glycerol-ph 95.9 0.016 3.5E-07 58.3 6.2 101 165-283 29-146 (354)
148 PLN03017 trehalose-phosphatase 95.8 0.039 8.6E-07 55.5 8.4 62 246-311 283-356 (366)
149 COG3769 Predicted hydrolase (H 95.5 0.064 1.4E-06 49.6 8.1 37 170-206 27-63 (274)
150 COG2179 Predicted hydrolase of 95.4 0.047 1E-06 48.3 6.6 110 125-280 20-133 (175)
151 TIGR02247 HAD-1A3-hyp Epoxide 95.3 0.039 8.4E-07 51.1 6.1 96 166-280 94-191 (211)
152 TIGR01686 FkbH FkbH-like domai 95.3 0.046 1E-06 54.4 7.0 91 166-284 31-129 (320)
153 PRK09456 ?-D-glucose-1-phospha 95.2 0.058 1.3E-06 49.6 7.0 97 166-281 84-181 (199)
154 TIGR01993 Pyr-5-nucltdase pyri 94.5 0.072 1.6E-06 48.2 5.6 98 166-281 84-181 (184)
155 PRK10725 fructose-1-P/6-phosph 94.2 0.11 2.4E-06 47.0 6.2 90 171-280 92-181 (188)
156 PLN02645 phosphoglycolate phos 93.9 0.11 2.5E-06 51.4 6.0 48 159-206 37-87 (311)
157 PLN02423 phosphomannomutase 93.7 0.1 2.2E-06 49.9 5.2 50 240-290 181-237 (245)
158 PHA02597 30.2 hypothetical pro 93.4 0.15 3.3E-06 46.6 5.6 92 166-282 74-171 (197)
159 PF09419 PGP_phosphatase: Mito 93.2 0.35 7.6E-06 43.4 7.4 112 128-283 36-163 (168)
160 PF03767 Acid_phosphat_B: HAD 93.1 0.14 3.1E-06 48.4 4.9 90 165-273 114-207 (229)
161 COG0637 Predicted phosphatase/ 92.8 0.33 7.1E-06 45.6 7.0 99 165-282 85-183 (221)
162 PLN02177 glycerol-3-phosphate 92.3 0.57 1.2E-05 49.5 8.6 98 167-285 111-215 (497)
163 TIGR01680 Veg_Stor_Prot vegeta 92.0 0.93 2E-05 43.8 8.9 89 164-271 143-235 (275)
164 COG1011 Predicted hydrolase (H 91.5 0.79 1.7E-05 42.6 8.0 95 166-280 99-194 (229)
165 PF13344 Hydrolase_6: Haloacid 91.3 0.15 3.2E-06 41.7 2.4 48 159-206 7-57 (101)
166 PF08235 LNS2: LNS2 (Lipin/Ned 91.2 1.7 3.6E-05 38.5 9.1 102 165-280 26-141 (157)
167 PLN02151 trehalose-phosphatase 90.3 0.87 1.9E-05 45.8 7.2 62 246-311 269-342 (354)
168 TIGR01493 HAD-SF-IA-v2 Haloaci 90.0 0.44 9.6E-06 42.5 4.5 85 166-276 90-174 (175)
169 TIGR01452 PGP_euk phosphoglyco 89.8 1.3 2.8E-05 43.1 7.9 48 159-206 11-61 (279)
170 PRK10748 flavin mononucleotide 89.4 0.97 2.1E-05 42.8 6.5 92 166-284 113-207 (238)
171 TIGR01684 viral_ppase viral ph 88.9 0.73 1.6E-05 45.0 5.3 41 167-207 146-187 (301)
172 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.6 0.56 1.2E-05 45.1 4.3 48 159-206 10-64 (257)
173 TIGR01457 HAD-SF-IIA-hyp2 HAD- 88.0 0.9 2E-05 43.4 5.3 48 159-206 10-60 (249)
174 PTZ00174 phosphomannomutase; P 87.7 0.88 1.9E-05 43.4 5.1 36 166-201 22-57 (247)
175 PRK10444 UMP phosphatase; Prov 87.3 0.6 1.3E-05 44.7 3.7 45 159-203 10-54 (248)
176 TIGR01663 PNK-3'Pase polynucle 86.8 2 4.3E-05 45.7 7.4 40 167-206 198-249 (526)
177 TIGR02251 HIF-SF_euk Dullard-l 86.8 0.56 1.2E-05 41.8 2.9 95 163-282 39-136 (162)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.7 0.59 1.3E-05 44.9 3.3 120 168-310 122-254 (257)
179 PHA03398 viral phosphatase sup 86.3 1.3 2.8E-05 43.4 5.2 40 167-206 148-188 (303)
180 TIGR02244 HAD-IG-Ncltidse HAD 85.3 3.5 7.5E-05 41.4 7.9 37 168-204 186-223 (343)
181 TIGR01689 EcbF-BcbF capsule bi 83.5 1.8 4E-05 36.9 4.4 32 165-196 23-54 (126)
182 COG0241 HisB Histidinol phosph 82.2 8.6 0.00019 34.9 8.5 103 167-280 32-144 (181)
183 COG3700 AphA Acid phosphatase 81.5 2.7 5.8E-05 37.8 4.7 90 167-283 115-210 (237)
184 PF05822 UMPH-1: Pyrimidine 5' 80.9 6.2 0.00013 37.6 7.3 134 165-310 89-241 (246)
185 KOG3040 Predicted sugar phosph 76.9 5.2 0.00011 37.0 5.2 51 156-206 13-66 (262)
186 TIGR01459 HAD-SF-IIA-hyp4 HAD- 73.6 3.9 8.5E-05 38.7 3.9 92 168-281 140-237 (242)
187 COG0647 NagD Predicted sugar p 73.1 4 8.6E-05 39.6 3.8 46 158-203 16-61 (269)
188 COG1877 OtsB Trehalose-6-phosp 71.0 15 0.00032 35.6 7.1 52 154-205 28-80 (266)
189 COG2503 Predicted secreted aci 70.0 22 0.00048 33.8 7.7 86 166-276 122-211 (274)
190 PF00389 2-Hacid_dh: D-isomer 69.2 52 0.0011 27.7 9.6 70 248-324 52-123 (133)
191 TIGR01456 CECR5 HAD-superfamil 67.4 26 0.00056 34.8 8.3 48 159-206 9-64 (321)
192 PF12689 Acid_PPase: Acid Phos 67.1 11 0.00023 33.9 5.0 40 167-206 46-86 (169)
193 KOG3085 Predicted hydrolase (H 64.3 20 0.00043 34.1 6.4 104 167-292 114-221 (237)
194 TIGR01460 HAD-SF-IIA Haloacid 63.1 17 0.00036 34.4 5.8 48 159-206 7-58 (236)
195 PTZ00445 p36-lilke protein; Pr 62.9 11 0.00024 35.0 4.3 64 117-193 27-102 (219)
196 TIGR02250 FCP1_euk FCP1-like p 62.0 17 0.00036 32.1 5.2 43 164-207 56-98 (156)
197 TIGR01452 PGP_euk phosphoglyco 61.0 6.7 0.00015 38.0 2.7 33 249-281 210-243 (279)
198 KOG2914 Predicted haloacid-hal 59.3 34 0.00073 32.2 6.9 100 167-283 93-194 (222)
199 PF12710 HAD: haloacid dehalog 58.3 4.4 9.4E-05 36.3 0.8 14 4-17 1-14 (192)
200 PF13242 Hydrolase_like: HAD-h 55.2 11 0.00025 28.4 2.6 52 248-299 11-70 (75)
201 PRK14194 bifunctional 5,10-met 55.1 35 0.00075 33.7 6.5 69 238-306 137-215 (301)
202 PF02358 Trehalose_PPase: Treh 54.1 12 0.00025 35.3 3.0 56 246-301 165-234 (235)
203 PLN02423 phosphomannomutase 52.5 21 0.00046 33.9 4.5 38 159-197 16-54 (245)
204 PRK13671 hypothetical protein; 49.4 1E+02 0.0022 30.4 8.7 97 157-276 2-111 (298)
205 COG0279 GmhA Phosphoheptose is 49.3 18 0.00039 32.3 3.1 43 156-200 112-154 (176)
206 PRK13670 hypothetical protein; 47.4 73 0.0016 32.7 7.7 97 156-276 2-112 (388)
207 PF06506 PrpR_N: Propionate ca 46.9 56 0.0012 29.3 6.2 108 169-322 64-172 (176)
208 COG4229 Predicted enolase-phos 44.7 59 0.0013 29.6 5.6 93 163-279 100-198 (229)
209 PF13380 CoA_binding_2: CoA bi 42.9 26 0.00056 29.2 3.1 40 167-206 64-104 (116)
210 cd05017 SIS_PGI_PMI_1 The memb 42.7 43 0.00093 27.7 4.5 37 167-205 55-91 (119)
211 PLN02645 phosphoglycolate phos 42.4 46 0.00099 32.9 5.3 59 250-310 239-307 (311)
212 cd01917 ACS_2 Acetyl-CoA synth 42.1 68 0.0015 31.1 6.1 139 167-314 139-283 (287)
213 KOG2882 p-Nitrophenyl phosphat 41.6 42 0.00091 32.9 4.6 48 159-206 31-81 (306)
214 COG4996 Predicted phosphatase 40.7 62 0.0013 27.8 4.9 56 151-206 20-81 (164)
215 cd00860 ThrRS_anticodon ThrRS 40.4 57 0.0012 25.0 4.6 47 160-206 6-53 (91)
216 PF14336 DUF4392: Domain of un 38.7 93 0.002 30.5 6.7 38 169-206 63-101 (291)
217 PF06941 NT5C: 5' nucleotidase 38.2 28 0.0006 31.6 2.8 29 166-194 73-101 (191)
218 PRK14179 bifunctional 5,10-met 36.7 1.5E+02 0.0033 28.9 7.8 65 238-302 136-210 (284)
219 PF02679 ComA: (2R)-phospho-3- 34.9 60 0.0013 31.0 4.5 112 167-307 52-174 (244)
220 cd04728 ThiG Thiazole synthase 34.4 1.2E+02 0.0027 28.9 6.4 53 152-205 90-145 (248)
221 PLN02591 tryptophan synthase 34.2 2E+02 0.0044 27.5 8.0 43 244-286 174-220 (250)
222 PF08645 PNK3P: Polynucleotide 34.1 34 0.00075 30.2 2.6 24 167-190 30-53 (159)
223 cd05014 SIS_Kpsf KpsF-like pro 32.9 44 0.00095 27.7 3.0 30 167-196 59-88 (128)
224 PF03129 HGTP_anticodon: Antic 32.4 70 0.0015 24.9 4.0 49 158-206 2-54 (94)
225 PRK03692 putative UDP-N-acetyl 32.3 2.4E+02 0.0053 26.8 8.3 121 172-316 95-225 (243)
226 TIGR03849 arch_ComA phosphosul 32.0 1.1E+02 0.0024 29.0 5.8 68 169-263 41-118 (237)
227 PRK14174 bifunctional 5,10-met 30.9 1.9E+02 0.0041 28.4 7.4 64 238-301 137-214 (295)
228 PRK14184 bifunctional 5,10-met 30.8 2.4E+02 0.0052 27.6 8.0 65 237-301 134-212 (286)
229 cd05008 SIS_GlmS_GlmD_1 SIS (S 30.3 49 0.0011 27.3 2.8 28 167-194 58-85 (126)
230 PRK10527 hypothetical protein; 30.1 77 0.0017 26.9 3.9 47 328-379 8-54 (125)
231 TIGR00262 trpA tryptophan synt 29.8 3E+02 0.0066 26.3 8.5 39 165-203 123-163 (256)
232 KOG3109 Haloacid dehalogenase- 29.5 1.9E+02 0.004 27.3 6.5 110 157-282 90-202 (244)
233 COG1832 Predicted CoA-binding 29.2 92 0.002 26.9 4.2 35 156-190 17-51 (140)
234 PRK00208 thiG thiazole synthas 29.0 1.4E+02 0.0031 28.5 5.9 53 152-205 90-145 (250)
235 cd00859 HisRS_anticodon HisRS 28.6 99 0.0022 23.2 4.2 46 160-205 6-52 (91)
236 cd01019 ZnuA Zinc binding prot 28.5 1.6E+02 0.0034 28.7 6.4 54 153-206 196-253 (286)
237 COG0309 HypE Hydrogenase matur 28.3 5.1E+02 0.011 26.0 9.8 84 160-265 219-306 (339)
238 CHL00200 trpA tryptophan synth 28.1 3.3E+02 0.0071 26.3 8.4 44 244-287 187-234 (263)
239 PF05240 APOBEC_C: APOBEC-like 27.9 62 0.0013 23.3 2.5 24 169-192 2-25 (55)
240 PRK00856 pyrB aspartate carbam 27.1 2.7E+02 0.0059 27.5 7.8 39 168-206 87-125 (305)
241 PRK11840 bifunctional sulfur c 26.8 2.7E+02 0.0059 27.7 7.7 52 151-202 163-217 (326)
242 cd01994 Alpha_ANH_like_IV This 26.6 2.5E+02 0.0055 25.6 7.1 37 170-206 11-60 (194)
243 cd01017 AdcA Metal binding pro 26.5 1.5E+02 0.0031 28.7 5.8 55 152-206 187-245 (282)
244 PRK09529 bifunctional acetyl-C 26.3 2E+02 0.0043 31.5 7.0 140 169-316 149-294 (711)
245 PRK02261 methylaspartate mutas 26.2 36 0.00079 29.3 1.3 80 127-206 26-114 (137)
246 cd05710 SIS_1 A subgroup of th 26.2 52 0.0011 27.3 2.3 29 167-195 59-87 (120)
247 cd01137 PsaA Metal binding pro 25.9 2E+02 0.0043 28.0 6.7 55 152-206 193-251 (287)
248 PRK10886 DnaA initiator-associ 25.8 97 0.0021 28.5 4.2 28 168-195 122-149 (196)
249 PRK13938 phosphoheptose isomer 25.5 50 0.0011 30.3 2.2 28 167-194 125-152 (196)
250 PF12017 Tnp_P_element: Transp 25.4 1.1E+02 0.0023 29.2 4.4 39 169-207 196-234 (236)
251 PF13541 ChlI: Subunit ChlI of 25.4 1.6E+02 0.0034 24.9 5.0 38 152-189 79-118 (121)
252 PF12407 Abdominal-A: Homeobox 25.3 54 0.0012 18.9 1.4 16 401-416 5-21 (24)
253 PRK15424 propionate catabolism 25.2 6.6E+02 0.014 27.0 10.8 79 170-279 95-174 (538)
254 PRK14189 bifunctional 5,10-met 24.9 2E+02 0.0044 28.1 6.3 66 237-302 135-210 (285)
255 cd02071 MM_CoA_mut_B12_BD meth 24.8 1.3E+02 0.0029 25.0 4.5 54 153-206 49-104 (122)
256 PRK10444 UMP phosphatase; Prov 24.7 74 0.0016 30.3 3.3 33 249-281 182-215 (248)
257 cd06167 LabA_like LabA_like pr 24.7 2.7E+02 0.0059 23.6 6.7 22 169-190 52-73 (149)
258 PRK15108 biotin synthase; Prov 24.5 7.2E+02 0.016 24.9 11.4 99 156-270 95-199 (345)
259 PF08821 CGGC: CGGC domain; I 24.3 2.5E+02 0.0055 23.1 5.9 36 154-189 37-72 (107)
260 PF02219 MTHFR: Methylenetetra 24.1 76 0.0016 30.9 3.3 41 154-194 70-111 (287)
261 cd05013 SIS_RpiR RpiR-like pro 24.0 63 0.0014 26.7 2.4 26 169-194 74-99 (139)
262 PLN03064 alpha,alpha-trehalose 23.6 1.1E+02 0.0023 35.3 4.7 39 167-205 623-662 (934)
263 cd02067 B12-binding B12 bindin 23.6 1.3E+02 0.0029 24.6 4.3 78 128-206 23-104 (119)
264 PF04273 DUF442: Putative phos 23.2 2E+02 0.0044 23.7 5.2 36 171-206 16-59 (110)
265 TIGR01501 MthylAspMutase methy 23.0 88 0.0019 26.9 3.1 80 127-206 24-112 (134)
266 PF13604 AAA_30: AAA domain; P 22.9 99 0.0022 28.2 3.7 92 174-267 38-130 (196)
267 KOG2630 Enolase-phosphatase E- 22.8 3.2E+02 0.007 25.9 6.9 94 166-283 123-222 (254)
268 PF03332 PMM: Eukaryotic phosp 22.7 62 0.0013 30.3 2.2 46 246-291 162-213 (220)
269 PF03031 NIF: NLI interacting 22.7 93 0.002 26.9 3.3 38 167-205 37-74 (159)
270 TIGR03679 arCOG00187 arCOG0018 22.4 3.8E+02 0.0082 24.9 7.5 37 170-206 9-58 (218)
271 KOG0541 Alkyl hydroperoxide re 22.3 1.5E+02 0.0033 26.3 4.3 39 168-206 64-103 (171)
272 cd04724 Tryptophan_synthase_al 22.2 1.7E+02 0.0037 27.7 5.2 37 248-284 176-215 (242)
273 PF01380 SIS: SIS domain SIS d 22.1 86 0.0019 25.8 2.9 37 164-200 62-98 (131)
274 cd01453 vWA_transcription_fact 22.0 2.8E+02 0.0061 24.9 6.4 36 169-204 123-159 (183)
275 cd04906 ACT_ThrD-I_1 First of 21.6 79 0.0017 24.5 2.4 35 159-193 42-77 (85)
276 TIGR03127 RuMP_HxlB 6-phospho 21.3 71 0.0015 28.4 2.3 34 167-200 84-117 (179)
277 COG2832 Uncharacterized protei 21.0 1.6E+02 0.0035 24.7 4.1 48 325-377 5-52 (119)
278 cd00861 ProRS_anticodon_short 20.9 1.1E+02 0.0023 23.7 3.0 48 159-206 5-56 (94)
279 cd05006 SIS_GmhA Phosphoheptos 20.6 67 0.0015 28.6 2.0 29 167-195 113-141 (177)
280 cd00738 HGTP_anticodon HGTP an 20.6 1.6E+02 0.0034 22.5 4.0 47 160-206 6-56 (94)
281 cd04795 SIS SIS domain. SIS (S 20.5 1E+02 0.0022 23.3 2.8 22 168-189 60-81 (87)
282 PF07287 DUF1446: Protein of u 20.3 2.7E+02 0.0058 28.3 6.4 40 167-206 56-100 (362)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-97 Score=744.90 Aligned_cols=437 Identities=74% Similarity=1.093 Sum_probs=416.4
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|+|||||||.|+++|++.+++++.+|.++++++..|+++++.+++|+||+|+++++.+|++++.+|++++++||||
T Consensus 327 mdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnP 406 (942)
T KOG0205|consen 327 MDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNP 406 (942)
T ss_pred ceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCc
Confidence 79999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
++||++++|.+++|++++++||+|++|+++|+.+.++++++++.+++|+++|+|.|+||++..|++.++..+.+|+|+|+
T Consensus 407 V~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gl 486 (942)
T KOG0205|consen 407 VDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGL 486 (942)
T ss_pred cccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+++.||||+++.++|++....|+.|.|+|||....+++.++++|+.++++|+..+.|...++.+...+.++++++++.|+
T Consensus 487 lp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfA 566 (942)
T KOG0205|consen 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA 566 (942)
T ss_pred cccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
.+.|+||+++|+.||+++|.|+|+|||+||+|+||.||+|||+.+++++|+.++|+|+++++++.|..++..||.+|+||
T Consensus 567 gVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrm 646 (942)
T KOG0205|consen 567 GVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (942)
T ss_pred ccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hH---------------------------------------------------------------------
Q 013242 321 RNYMVRGI-DG--------------------------------------------------------------------- 330 (447)
Q Consensus 321 ~~~~~~~~-~~--------------------------------------------------------------------- 330 (447)
++|.+|++ ..
T Consensus 647 knytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~ 726 (942)
T KOG0205|consen 647 KNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAI 726 (942)
T ss_pred hhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHH
Confidence 99999984 11
Q ss_pred ------------------------------HHHHHHHHHHh---------------------------------------
Q 013242 331 ------------------------------LSSTEFIQVLE--------------------------------------- 341 (447)
Q Consensus 331 ------------------------------~~~~~~l~~~~--------------------------------------- 341 (447)
+++++|+++++
T Consensus 727 ~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatlia 806 (942)
T KOG0205|consen 727 MTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIA 806 (942)
T ss_pred HHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHH
Confidence 22333333333
Q ss_pred -------------------------hcccccHHHHHHH---------------HHhcccCCcccchhHHHHHHHHHHHhh
Q 013242 342 -------------------------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEERELLWAHAQRTL 381 (447)
Q Consensus 342 -------------------------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~~w~~~~~~l 381 (447)
+.+|+|++.+.+. ++++|+..++||++.++.+|+..||++
T Consensus 807 vya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~ 886 (942)
T KOG0205|consen 807 VYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTL 886 (942)
T ss_pred HHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhh
Confidence 5567888888884 578899999999999999999999999
Q ss_pred hcCCCCCCccccccccccccchhhHHHHhhhhHHhhhhhhcccchhhhhhhccCCChhhhhccccC
Q 013242 382 HGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 447 (447)
Q Consensus 382 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 447 (447)
||+|+++ .+|||++|||++||+|+|||||+||||||||||+||||+|+++| |||||
T Consensus 887 ~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 887 HGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred cccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999994 27899999999999999999999999999999999999999999 99997
No 2
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-69 Score=594.86 Aligned_cols=366 Identities=33% Similarity=0.473 Sum_probs=303.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCC---------hHHHHHHHHHhcCC--C------CCChHHHHHHHhhCC-
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD---------ADTVVLMAARASQV--E------NLDVIDAAIVGMLAD- 62 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~---------~~~~l~~a~~~~~~--~------~~~pi~~ai~~~~~~- 62 (447)
||+||||||||||+|+|+|.++++..-....+ ..+++..++.|+.. . ..||.|.|++.++.+
T Consensus 348 v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~ 427 (917)
T COG0474 348 VDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKL 427 (917)
T ss_pred ccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhc
Confidence 68999999999999999999987642011122 11355666666532 2 358999999998754
Q ss_pred -----chhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC-------ChhhHHHHHHHHHHHHH
Q 013242 63 -----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKVNAVINKFAE 130 (447)
Q Consensus 63 -----~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-------~~~~~~~~~~~~~~~~~ 130 (447)
....+..+++++.+||+|.+|||++++++.+|+++.++|||||.|++.|.. .++..+.+.+..++|++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 507 (917)
T COG0474 428 GFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELAS 507 (917)
T ss_pred CCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHH
Confidence 233455667799999999999999999977788999999999999998873 45677889999999999
Q ss_pred hhhhhhhhhhcccCCCCc----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 131 RGLRSLAVAYQEVPEGSK----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 131 ~G~r~l~vA~~~~~~~~~----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+|+|+|++||+.++..+. ++.|++++|+|+++++||||++++++|+.|+++||+|||+||||..||.+||++||+.
T Consensus 508 ~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 508 EGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred HHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCC
Confidence 999999999998765544 5789999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-C
Q 013242 207 TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-D 285 (447)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~ 285 (447)
.+.....++.|.+.+...+. ++.+.++++.+|||++|+||.++|+.||++|+.|+|+|||+||+||||+|||||||+ +
T Consensus 588 ~~~~~~~vi~G~el~~l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~ 666 (917)
T COG0474 588 AEAESALVIDGAELDALSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666 (917)
T ss_pred CCCCceeEeehHHhhhcCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEeccc
Confidence 65443446667665533222 566788888999999999999999999999999999999999999999999999998 6
Q ss_pred chHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhc--ccccHHHHHHH-HHhcccC
Q 013242 286 ATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN--FLFTLDTVIAI-LQTAFTS 361 (447)
Q Consensus 286 a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~--~~~pl~~~~~l-~~~~~~~ 361 (447)
|++++|++||+++.++++..|..+|.+||++|.|+++++.|.+ .++...+++..+.++ +++|+.+++++ ..+.++.
T Consensus 667 Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~ 746 (917)
T COG0474 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDS 746 (917)
T ss_pred HHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999 554434333333322 34799999998 4444444
Q ss_pred Ccccch
Q 013242 362 KKDFGK 367 (447)
Q Consensus 362 ~~~~~~ 367 (447)
.+.+..
T Consensus 747 ~pa~~L 752 (917)
T COG0474 747 LPALAL 752 (917)
T ss_pred hhhhee
Confidence 444443
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.2e-64 Score=548.00 Aligned_cols=344 Identities=55% Similarity=0.859 Sum_probs=293.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|+||||||||||+|+|+|.+.+. ...+.+.++++.+++.++...+.||+|.|++.++.+.+..+..++.++.+||++
T Consensus 286 v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~ 363 (755)
T TIGR01647 286 MDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDP 363 (755)
T ss_pred CcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCC
Confidence 689999999999999999998653 222367888899988776555668999999998766554566788899999999
Q ss_pred CCceEEEEEEecC-CeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEE
Q 013242 81 TGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG 159 (447)
Q Consensus 81 ~~kr~~v~~~~~~-g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG 159 (447)
.+|+|++++.+.+ |+.+.++||+|+.|+++|....+.++.+++.+++++++|+|++++|+++ .|++|+|+|
T Consensus 364 ~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~G 435 (755)
T TIGR01647 364 VDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLG 435 (755)
T ss_pred CCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEE
Confidence 9999999887653 7788899999999999998766777888899999999999999999973 367899999
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 160 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
+++|+|||||+++++|++|+++||+|+|+|||++.+|.++|+++||..+.+....+......+.+...+++++++++++|
T Consensus 436 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 436 LLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred EeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999997543322222211112233344567788899999
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQR 319 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~ 319 (447)
|+++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||+++++.|+++||+|+++++|..|+.++++||++|+|
T Consensus 516 Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~n 595 (755)
T TIGR01647 516 AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQR 595 (755)
T ss_pred EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHH
Q 013242 320 MRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 320 i~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l 354 (447)
|++|+.|.+ .++..++++..+.+++.+|+.+++++
T Consensus 596 i~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il 631 (755)
T TIGR01647 596 MKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVV 631 (755)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHH
Confidence 999999999 55555544444444444678998887
No 4
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-64 Score=523.15 Aligned_cols=353 Identities=30% Similarity=0.454 Sum_probs=286.9
Q ss_pred CcEEEecchhhcccCceEEEeeEeeccc-----------CCCC---------------------hHHHHHHHHHhcCC--
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFA-----------GGVD---------------------ADTVVLMAARASQV-- 46 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~-----------~~~~---------------------~~~~l~~a~~~~~~-- 46 (447)
+++||+|||||||+|+|++.+.++.-.. .+++ -.+++..++.|...
T Consensus 332 ~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v 411 (972)
T KOG0202|consen 332 VNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATV 411 (972)
T ss_pred eeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhh
Confidence 4799999999999999999997752110 0111 11344455555321
Q ss_pred ----C-----CCChHHHHHHHhhCC---ch-----h-----------hhccceEEEEEecCCCCceEEEEEEecCCe--E
Q 013242 47 ----E-----NLDVIDAAIVGMLAD---PK-----E-----------ARADIQEVHFLPFDPTGKRTALTYIDSEGK--M 96 (447)
Q Consensus 47 ----~-----~~~pi~~ai~~~~~~---~~-----~-----------~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~--~ 96 (447)
. ...|.+.|+..++.. ++ . ....++.+..+||++.+|+|++.+.+..|+ +
T Consensus 412 ~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~ 491 (972)
T KOG0202|consen 412 EYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGY 491 (972)
T ss_pred hcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccc
Confidence 1 235788888765421 11 0 112345568999999999999999986664 7
Q ss_pred EEEEcCcHHHHHhhcc------------CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC-----------CcCCCCC
Q 013242 97 HRVTKGSPEQILNLLH------------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-----------SKESSGS 153 (447)
Q Consensus 97 ~~~~KGa~e~i~~~~~------------~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~-----------~~~~~e~ 153 (447)
..|.|||+|.|+++|+ .++..++.+.+...+|+++|+|||++|++..+.. .+...|.
T Consensus 492 ~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~ 571 (972)
T KOG0202|consen 492 KMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAES 571 (972)
T ss_pred eEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhccccccccccc
Confidence 8999999999999994 2345678899999999999999999999977631 2456789
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CcccccCCcchhhhhcCChhH
Q 013242 154 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 154 ~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+|+|+|++++.||||++++++|+.|+++||+|+|+|||+..||++||+++|+.++.. ....+.|.+.++ +...+.++
T Consensus 572 ~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~-ls~~~~~~ 650 (972)
T KOG0202|consen 572 DLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD-LSDEELDD 650 (972)
T ss_pred ceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-CCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999976433 345556655542 33444566
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHH
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
......+|+|+.|.||.+||+.||++|..|+|+|||+||+||||.|||||||| +|+++||+|||+||.+|||+.|+.||
T Consensus 651 ~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAV 730 (972)
T KOG0202|consen 651 AVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAV 730 (972)
T ss_pred HhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHH
Confidence 77888899999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhc-ccccHHHHHHH
Q 013242 311 LISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN-FLFTLDTVIAI 354 (447)
Q Consensus 311 ~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~-~~~pl~~~~~l 354 (447)
++||.+|.||++|+.|.+ .++...++++.+..+ ...||.++|+|
T Consensus 731 EEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiL 776 (972)
T KOG0202|consen 731 EEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQIL 776 (972)
T ss_pred HHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhh
Confidence 999999999999999999 666666555555544 45899999999
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=7.8e-63 Score=545.37 Aligned_cols=346 Identities=28% Similarity=0.455 Sum_probs=288.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCC--CCCChHHHHHHHhhCCch--hhhccceEEEEE
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EARADIQEVHFL 76 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~pi~~ai~~~~~~~~--~~~~~~~~~~~~ 76 (447)
+|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ...||+|.|++.++.... ..+..++.++.+
T Consensus 369 v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~ 445 (903)
T PRK15122 369 MDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDEL 445 (903)
T ss_pred CcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEe
Confidence 689999999999999999988541 2244556777777654322 234799999999875422 123467889999
Q ss_pred ecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC----------ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC
Q 013242 77 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG 146 (447)
Q Consensus 77 pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~ 146 (447)
||++.+|+|++++++.+|+++.++||+||.|+++|.. +++..+++.+..++++++|+|++++||+.++..
T Consensus 446 pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~ 525 (903)
T PRK15122 446 PFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGG 525 (903)
T ss_pred eeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcc
Confidence 9999999999998877788899999999999999962 223456678888999999999999999987654
Q ss_pred Cc-----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcch
Q 013242 147 SK-----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD 221 (447)
Q Consensus 147 ~~-----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~ 221 (447)
+. +..|++++|+|+++|+|||||+++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.+.+
T Consensus 526 ~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~ 601 (903)
T PRK15122 526 ESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIE 601 (903)
T ss_pred ccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhh
Confidence 32 23578999999999999999999999999999999999999999999999999999963 2345555544
Q ss_pred hhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCC
Q 013242 222 ESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301 (447)
Q Consensus 222 ~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~ 301 (447)
.+...++.+.++++.+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++++|.|+++||+|++++
T Consensus 602 -~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd 680 (903)
T PRK15122 602 -AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEK 680 (903)
T ss_pred -hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecC
Confidence 2334456777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHH-HhhcccccHHHHHHH
Q 013242 302 GLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQV-LELNFLFTLDTVIAI 354 (447)
Q Consensus 302 ~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~-~~~~~~~pl~~~~~l 354 (447)
+|+.|+.++++||++|+||++|+.|.+ .++..++.+.+ .++.+++|+.++++|
T Consensus 681 ~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 681 SLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 999999999999999999999999999 44333332222 233456899999998
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.1e-62 Score=543.48 Aligned_cols=346 Identities=29% Similarity=0.471 Sum_probs=289.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCC--CCChHHHHHHHhhCCch--hhhccceEEEEE
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADPK--EARADIQEVHFL 76 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~--~~~pi~~ai~~~~~~~~--~~~~~~~~~~~~ 76 (447)
||+||||||||||+|+|+|.+.+ . ..+.+.++++.+++.++... ..||+|.|++.++.... .....++.++.+
T Consensus 371 v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~ 447 (902)
T PRK10517 371 MDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEI 447 (902)
T ss_pred CCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEe
Confidence 68999999999999999998753 1 22455677888877655432 35799999998875422 234568889999
Q ss_pred ecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC----------ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC
Q 013242 77 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG 146 (447)
Q Consensus 77 pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~ 146 (447)
||++.+|+|++++.+.++.+..++||+||.|+++|.. +++..+.+.+..++++++|+|++++||++++..
T Consensus 448 pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~ 527 (902)
T PRK10517 448 PFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAR 527 (902)
T ss_pred eeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcc
Confidence 9999999999988876777889999999999999962 223456677888999999999999999987643
Q ss_pred CcC---CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhh
Q 013242 147 SKE---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES 223 (447)
Q Consensus 147 ~~~---~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~ 223 (447)
+.+ ..|++++|+|+++|+|||||+++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.+.+ .
T Consensus 528 ~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~-~ 602 (902)
T PRK10517 528 EGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDIE-T 602 (902)
T ss_pred ccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHH-h
Confidence 321 2477999999999999999999999999999999999999999999999999999952 3455555443 2
Q ss_pred hhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCCh
Q 013242 224 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 303 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~ 303 (447)
+...++.+.++++.+|+|++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++++|+|+++||+|+++++|
T Consensus 603 l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~ 682 (902)
T PRK10517 603 LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSL 682 (902)
T ss_pred CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCCh
Confidence 34445677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHHHHHH
Q 013242 304 NVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDTVIAI 354 (447)
Q Consensus 304 ~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~~~~l 354 (447)
..|+.++++||++|+||++|+.|.+ .++..++.+.++. +.+++|+.++++|
T Consensus 683 ~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL 735 (902)
T PRK10517 683 MVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLL 735 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 9999999999999999999999999 4443333333333 3456899999998
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=6.5e-62 Score=537.20 Aligned_cols=346 Identities=27% Similarity=0.443 Sum_probs=288.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCC--CCCChHHHHHHHhhCCc--hhhhccceEEEEE
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADP--KEARADIQEVHFL 76 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~pi~~ai~~~~~~~--~~~~~~~~~~~~~ 76 (447)
+|+||||||||||+|+|+|.+.+ ...+.+.++++.+++.++.. ...||+|.|++.++... ...+..++.++.+
T Consensus 336 v~vic~DKTGTLT~~~m~v~~~~---~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~ 412 (867)
T TIGR01524 336 MDILCTDKTGTLTQDKIELEKHI---DSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEI 412 (867)
T ss_pred ccEEEecCCCccccCeEEEEEEe---cCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEe
Confidence 68999999999999999998853 12345567778777765442 23479999999887542 2234567889999
Q ss_pred ecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC----------ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC
Q 013242 77 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG 146 (447)
Q Consensus 77 pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~ 146 (447)
||+|.+|+|++++.+.++..+.++||+|+.|+++|.. +++..+++.+.+++++++|+|++++||++++..
T Consensus 413 pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~ 492 (867)
T TIGR01524 413 PFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVG 492 (867)
T ss_pred ccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcc
Confidence 9999999999998865666789999999999999962 233456788888999999999999999988654
Q ss_pred Cc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhh
Q 013242 147 SK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES 223 (447)
Q Consensus 147 ~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~ 223 (447)
+. +..|++|+|+|+++|+||||++++++|++|+++||+|+|+|||+..+|.++|+++||.++ .++.|.+.+ .
T Consensus 493 ~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~v~~g~~l~-~ 567 (867)
T TIGR01524 493 EADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGADIE-E 567 (867)
T ss_pred cccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----CeeecHhhh-h
Confidence 32 124788999999999999999999999999999999999999999999999999999632 345554443 2
Q ss_pred hhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCCh
Q 013242 224 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 303 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~ 303 (447)
+...++.+.++++.+|||++|+||.++|+.+|++|++|+|+|||+||+|||+.|||||||++|++.|+++||+|+++++|
T Consensus 568 ~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~ 647 (867)
T TIGR01524 568 LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSL 647 (867)
T ss_pred CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCCh
Confidence 23345667788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHHHHHH
Q 013242 304 NVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDTVIAI 354 (447)
Q Consensus 304 ~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~~~~l 354 (447)
+.|+.++++||++|+||++|+.|.+ .++..++.+.++. +.+++|+.+++++
T Consensus 648 ~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 700 (867)
T TIGR01524 648 MVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLL 700 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 9999999999999999999999999 4443333333333 3456899999998
No 8
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.4e-61 Score=541.22 Aligned_cols=353 Identities=27% Similarity=0.428 Sum_probs=283.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeec---c-----cCCC---------------------------------------C-
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEI---F-----AGGV---------------------------------------D- 32 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~---~-----~~~~---------------------------------------~- 32 (447)
+++||+|||||||+|+|+|.+.++.. + ..++ +
T Consensus 359 vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1053)
T TIGR01523 359 VNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDL 438 (1053)
T ss_pred ccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccccc
Confidence 68999999999999999999876421 0 0000 0
Q ss_pred --------hHHHHHHHHHhcCCC------------CCChHHHHHHHhhCCch----------hh----------------
Q 013242 33 --------ADTVVLMAARASQVE------------NLDVIDAAIVGMLADPK----------EA---------------- 66 (447)
Q Consensus 33 --------~~~~l~~a~~~~~~~------------~~~pi~~ai~~~~~~~~----------~~---------------- 66 (447)
...++..++.|+... ..||.|.|++.++...+ +.
T Consensus 439 ~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1053)
T TIGR01523 439 PEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNE 518 (1053)
T ss_pred ccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccc
Confidence 013555566554211 24899999998753111 00
Q ss_pred ---hccceEEEEEecCCCCceEEEEEEecCC-eEEEEEcCcHHHHHhhccC------------ChhhHHHHHHHHHHHHH
Q 013242 67 ---RADIQEVHFLPFDPTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKVNAVINKFAE 130 (447)
Q Consensus 67 ---~~~~~~~~~~pF~~~~kr~~v~~~~~~g-~~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~ 130 (447)
+..|+.++.+||+|.+|||++++++.++ .+++|+|||||.|+++|.. +++..+.+.+.+++|++
T Consensus 519 ~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~ 598 (1053)
T TIGR01523 519 KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598 (1053)
T ss_pred cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHh
Confidence 2357889999999999999999987544 4789999999999999962 12346678888999999
Q ss_pred hhhhhhhhhhcccCCCC------------cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH
Q 013242 131 RGLRSLAVAYQEVPEGS------------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE 198 (447)
Q Consensus 131 ~G~r~l~vA~~~~~~~~------------~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ 198 (447)
+|+|||++||+.++.++ ++..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||++.+|.+
T Consensus 599 ~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~ 678 (1053)
T TIGR01523 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKA 678 (1053)
T ss_pred cCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 99999999999886532 234588999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCC--------CcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCc
Q 013242 199 TGRRLGMGTNMY--------PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 270 (447)
Q Consensus 199 ia~~lGi~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND 270 (447)
+|+++||.+... ...++.|.+.+. +...++.++++.+.+|||++|+||.++|+.+|++|+.|+|+|||+||
T Consensus 679 iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvND 757 (1053)
T TIGR01523 679 IAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVND 757 (1053)
T ss_pred HHHHcCCCCccccccccccccceeeehHHhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcch
Confidence 999999964311 124555554432 23334556677788999999999999999999999999999999999
Q ss_pred hhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhc-----
Q 013242 271 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN----- 343 (447)
Q Consensus 271 ~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~----- 343 (447)
+|||+.|||||||| ++++.|+++||+|+.+++|+.|..+|.+||++|+|+++++.|.+ .++..++++..+.++
T Consensus 758 apaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g 837 (1053)
T TIGR01523 758 SPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENG 837 (1053)
T ss_pred HHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccC
Confidence 99999999999998 89999999999999999999999999999999999999999999 555444444444443
Q ss_pred -ccccHHHHHHH
Q 013242 344 -FLFTLDTVIAI 354 (447)
Q Consensus 344 -~~~pl~~~~~l 354 (447)
..+|+.++++|
T Consensus 838 ~~~~Pl~~~qiL 849 (1053)
T TIGR01523 838 KSVFPLSPVEIL 849 (1053)
T ss_pred CCcCchHHHHHH
Confidence 24799999998
No 9
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-62 Score=502.18 Aligned_cols=352 Identities=25% Similarity=0.356 Sum_probs=292.6
Q ss_pred cEEEecchhhcccCceEEEeeEeecccCC--------CChH--HHHHHHHHh-cC--------C-----CCCChHHHHHH
Q 013242 2 DVLCCDKTGTLTLNKLTVDKNLIEIFAGG--------VDAD--TVVLMAARA-SQ--------V-----ENLDVIDAAIV 57 (447)
Q Consensus 2 ~~i~~DKTGTLT~n~~~v~~~~i~~~~~~--------~~~~--~~l~~a~~~-~~--------~-----~~~~pi~~ai~ 57 (447)
++||+|||||||+|.|+|.+.++....+. .++. +++..+-.. +. . -..+|.++|++
T Consensus 436 T~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL 515 (1034)
T KOG0204|consen 436 TAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALL 515 (1034)
T ss_pred eEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHH
Confidence 57999999999999999999776322111 2221 122111111 10 0 01368999999
Q ss_pred HhhC----CchhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhcc-----------CChhhHHHHH
Q 013242 58 GMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-----------NKSKIGRKVN 122 (447)
Q Consensus 58 ~~~~----~~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~-----------~~~~~~~~~~ 122 (447)
++.. +....|...+.++++||||.+|+|+++++.++|..+.++|||+|.|+..|. .+++....++
T Consensus 516 ~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~ 595 (1034)
T KOG0204|consen 516 GFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFK 595 (1034)
T ss_pred HHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHH
Confidence 8753 445567788899999999999999999997776623999999999999996 2344556899
Q ss_pred HHHHHHHHhhhhhhhhhhcccCCCC--------cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 013242 123 AVINKFAERGLRSLAVAYQEVPEGS--------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLA 194 (447)
Q Consensus 123 ~~~~~~~~~G~r~l~vA~~~~~~~~--------~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~ 194 (447)
..++.|+.+|+|++|+||+++++.+ .+.++++++++|+++++||.||+++++|+.|+.+||.|.|+||||..
T Consensus 596 ~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~ 675 (1034)
T KOG0204|consen 596 DVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNIN 675 (1034)
T ss_pred HHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHH
Confidence 9999999999999999999854331 13567899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHH
Q 013242 195 IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 274 (447)
Q Consensus 195 ~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al 274 (447)
||++||.+|||.++......+.|.+.. .+...+.++++.+..++||.+|.||+.+|+.|+.+|++|+.+|||.||+|||
T Consensus 676 TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPAL 754 (1034)
T KOG0204|consen 676 TAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPAL 754 (1034)
T ss_pred HHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhh
Confidence 999999999998876666777777665 4556677888999999999999999999999999999999999999999999
Q ss_pred hhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhh-cccccHHHH
Q 013242 275 KKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLEL-NFLFTLDTV 351 (447)
Q Consensus 275 ~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~-~~~~pl~~~ 351 (447)
++||||.||| .++++||++||+|+++|+|++|+.++.|||++|.||+||++|.+ .++...+.-+++.. ..-.||..+
T Consensus 755 keADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAV 834 (1034)
T KOG0204|consen 755 KEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAV 834 (1034)
T ss_pred hhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHH
Confidence 9999999999 79999999999999999999999999999999999999999999 55544444444443 346899999
Q ss_pred HHH
Q 013242 352 IAI 354 (447)
Q Consensus 352 ~~l 354 (447)
|+|
T Consensus 835 QlL 837 (1034)
T KOG0204|consen 835 QLL 837 (1034)
T ss_pred HHH
Confidence 997
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.2e-60 Score=532.64 Aligned_cols=351 Identities=25% Similarity=0.379 Sum_probs=284.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeeccc---CC----CC--hHHHHHHHHHhcCC------------CCCChHHHHHHHh
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFA---GG----VD--ADTVVLMAARASQV------------ENLDVIDAAIVGM 59 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~---~~----~~--~~~~l~~a~~~~~~------------~~~~pi~~ai~~~ 59 (447)
||+||||||||||+|+|+|.+++..... .+ .+ ..+++..++.++.. ...||+|.|++.+
T Consensus 376 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~ 455 (941)
T TIGR01517 376 ATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGF 455 (941)
T ss_pred ceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHH
Confidence 6899999999999999999987642110 00 01 12233333333211 1247999999988
Q ss_pred hCC----chhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCC----------hhhHHHHHHHH
Q 013242 60 LAD----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK----------SKIGRKVNAVI 125 (447)
Q Consensus 60 ~~~----~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~----------~~~~~~~~~~~ 125 (447)
+.. ..+.+..++.++.+||+|.+|+|+++++..+++++.++|||||.|++.|... .+..+.+.+.+
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~ 535 (941)
T TIGR01517 456 LLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVI 535 (941)
T ss_pred HHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHH
Confidence 642 2233456778899999999999999998766778999999999999999631 01346788889
Q ss_pred HHHHHhhhhhhhhhhcccCCCCc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 013242 126 NKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 202 (447)
Q Consensus 126 ~~~~~~G~r~l~vA~~~~~~~~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~ 202 (447)
++|+++|+|++++||+.++.++. +..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||++.+|.++|++
T Consensus 536 ~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~ 615 (941)
T TIGR01517 536 EPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN 615 (941)
T ss_pred HHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH
Confidence 99999999999999998864432 234789999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 203 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 203 lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
+||.++. ..++.|.+.+. +...++.+++.+..+|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||
T Consensus 616 ~GI~~~~--~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIA 692 (941)
T TIGR01517 616 CGILTFG--GLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFS 692 (941)
T ss_pred cCCCCCC--ceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCccee
Confidence 9997432 23555554432 33345667788889999999999999999999999999999999999999999999999
Q ss_pred ec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHHHHHH
Q 013242 283 VA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDTVIAI 354 (447)
Q Consensus 283 ~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~~~~l 354 (447)
|| ++++.|+++||+|+++++|+.|+.++++||++|+|+++++.|.+ .++..+++..++. +...+|+++++++
T Consensus 693 mg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil 767 (941)
T TIGR01517 693 MGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLL 767 (941)
T ss_pred cCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 99 89999999999999999999999999999999999999999999 5555444444433 3356799999997
No 11
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.8e-59 Score=523.34 Aligned_cols=353 Identities=26% Similarity=0.397 Sum_probs=281.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeec--cc-CC--------CC-----hHHHHHHHHHhcCC---------------CCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEI--FA-GG--------VD-----ADTVVLMAARASQV---------------ENL 49 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~--~~-~~--------~~-----~~~~l~~a~~~~~~---------------~~~ 49 (447)
||+||||||||||+|+|+|.+++++. +. .+ .+ .+.++..++.|+.. ...
T Consensus 344 v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~g 423 (997)
T TIGR01106 344 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAG 423 (997)
T ss_pred CCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCc
Confidence 68999999999999999999876421 00 00 11 12455666666431 124
Q ss_pred ChHHHHHHHhhCC----chhhhccceEEEEEecCCCCceEEEEEEe--c-CCeEEEEEcCcHHHHHhhccC---------
Q 013242 50 DVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYID--S-EGKMHRVTKGSPEQILNLLHN--------- 113 (447)
Q Consensus 50 ~pi~~ai~~~~~~----~~~~~~~~~~~~~~pF~~~~kr~~v~~~~--~-~g~~~~~~KGa~e~i~~~~~~--------- 113 (447)
||.|.|++.++.. ..+.+..++.++.+||+|.+|||++++.. . ++++++|+|||||.|+++|..
T Consensus 424 dp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~ 503 (997)
T TIGR01106 424 DASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQP 503 (997)
T ss_pred ChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCccc
Confidence 7999999987642 23456678899999999999999988763 2 246789999999999999952
Q ss_pred -ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc--------C---CCCCCcEEEEeccCCCCCCcchHHHHHHHHhC
Q 013242 114 -KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--------E---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSL 181 (447)
Q Consensus 114 -~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~--------~---~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~ 181 (447)
+++..+.+.+.+++|+++|+|++++||+.++.++. + ..|++|+|+|+++++||||++++++|++|+++
T Consensus 504 l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~ 583 (997)
T TIGR01106 504 LDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSA 583 (997)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHC
Confidence 23456778889999999999999999998864321 1 22789999999999999999999999999999
Q ss_pred CCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------cccccCCcchhhhhcCChhHHHhhcc--
Q 013242 182 GLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKAD-- 237 (447)
Q Consensus 182 Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (447)
||+|+|+|||++.+|.++|+++|+.++... ..++.|.+.+. +...++++++.++.
T Consensus 584 Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~~~~~~~~~~ 662 (997)
T TIGR01106 584 GIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLDEILKYHTEI 662 (997)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHHHHHHhcCCE
Confidence 999999999999999999999999643210 12444444332 22234556666654
Q ss_pred chhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
+|||++|+||.++|+.+|+.|++|+|+|||+||+|||+.|||||||| +|++.++++||+|+++++|+.|+.+|.+||++
T Consensus 663 VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i 742 (997)
T TIGR01106 663 VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 742 (997)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 68999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hHHHHHHHHHHH-hhcccccHHHHHHH
Q 013242 317 FQRMRNYMVRGI-DGLSSTEFIQVL-ELNFLFTLDTVIAI 354 (447)
Q Consensus 317 ~~~i~~~~~~~~-~~~~~~~~l~~~-~~~~~~pl~~~~~l 354 (447)
|.|+++++.|.+ .++..++..+.+ ++..+.|+.++++|
T Consensus 743 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL 782 (997)
T TIGR01106 743 FDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITIL 782 (997)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHH
Confidence 999999999999 443333333322 33456799999997
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.8e-58 Score=513.48 Aligned_cols=352 Identities=29% Similarity=0.414 Sum_probs=281.1
Q ss_pred CcEEEecchhhcccCceEEEeeEeecc-----------cCCCC-------------------hHHHHHHHHHhcCCC---
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIF-----------AGGVD-------------------ADTVVLMAARASQVE--- 47 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~-----------~~~~~-------------------~~~~l~~a~~~~~~~--- 47 (447)
||+||||||||||+|+|+|.+++.... ..+++ .+.++..++.|+...
T Consensus 289 v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~ 368 (917)
T TIGR01116 289 TTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDF 368 (917)
T ss_pred ceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeec
Confidence 689999999999999999998764210 00000 123455556555321
Q ss_pred ---------CCChHHHHHHHhhCCch--------------------hhhccceEEEEEecCCCCceEEEEEEecCCeEEE
Q 013242 48 ---------NLDVIDAAIVGMLADPK--------------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR 98 (447)
Q Consensus 48 ---------~~~pi~~ai~~~~~~~~--------------------~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~ 98 (447)
..||.|.|++.++.+.+ ..+..++.++.+||+|.+|||++++++ ++++++
T Consensus 369 ~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~ 447 (917)
T TIGR01116 369 NERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKL 447 (917)
T ss_pred cccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEE
Confidence 24899999998753211 124567789999999999999999885 467889
Q ss_pred EEcCcHHHHHhhccC-----------ChhhHHHHHHHHHHHHH-hhhhhhhhhhcccCCCC----------cCCCCCCcE
Q 013242 99 VTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS----------KESSGSPWQ 156 (447)
Q Consensus 99 ~~KGa~e~i~~~~~~-----------~~~~~~~~~~~~~~~~~-~G~r~l~vA~~~~~~~~----------~~~~e~~~~ 156 (447)
|+|||||.|++.|.. +++..+++.+.+++|++ +|+||+++||+.++.+. ++..|++|+
T Consensus 448 ~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~ 527 (917)
T TIGR01116 448 FVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLT 527 (917)
T ss_pred EEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcE
Confidence 999999999999962 12346678888999999 99999999999986421 234588999
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--cccccCCcchhhhhcCChhHHHh
Q 013242 157 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
|+|+++++||||++++++|+.|+++||+++|+|||+..+|.++|+++|+..+... ...+.|.+.+ .+...+......
T Consensus 528 ~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~-~~~~~~~~~~~~ 606 (917)
T TIGR01116 528 FIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-EMGPAKQRAACR 606 (917)
T ss_pred EEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHh-hCCHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999753211 1233443322 122223445566
Q ss_pred hccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHH
Q 013242 235 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 314 (447)
Q Consensus 235 ~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r 314 (447)
+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.|||||||+++++.++++||+++.+++|+.|.+++++||
T Consensus 607 ~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR 686 (917)
T TIGR01116 607 SAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGR 686 (917)
T ss_pred cCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hHHHHHHHHHHHhh-cccccHHHHHHH
Q 013242 315 AIFQRMRNYMVRGI-DGLSSTEFIQVLEL-NFLFTLDTVIAI 354 (447)
Q Consensus 315 ~~~~~i~~~~~~~~-~~~~~~~~l~~~~~-~~~~pl~~~~~l 354 (447)
++|+|+++++.|.+ .++...+.+..+.+ .++.|+++++++
T Consensus 687 ~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll 728 (917)
T TIGR01116 687 AIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLL 728 (917)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 99999999999999 55444444433333 345799999997
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.2e-58 Score=521.22 Aligned_cols=350 Identities=23% Similarity=0.270 Sum_probs=272.4
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCC----------CChHHHHHHHHHhcCC------CCCChHHHHHHHhhCCch
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------VDADTVVLMAARASQV------ENLDVIDAAIVGMLADPK 64 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~----------~~~~~~l~~a~~~~~~------~~~~pi~~ai~~~~~~~~ 64 (447)
||++|||||||||+|+|+|.+.+....... ......+...+.|+.. ...||+|.|++.+.+...
T Consensus 448 v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~ 527 (1054)
T TIGR01657 448 IDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTL 527 (1054)
T ss_pred eeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEE
Confidence 689999999999999999998653211000 0112233333333321 135899999999864211
Q ss_pred hh-------------------hccceEEEEEecCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhccCChhhHHHHHHH
Q 013242 65 EA-------------------RADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAV 124 (447)
Q Consensus 65 ~~-------------------~~~~~~~~~~pF~~~~kr~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~ 124 (447)
+. ...+++++.+||+|.+|||+++++.. +++++.++|||||.|+++|.. +..++.+++.
T Consensus 528 ~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~~ 606 (1054)
T TIGR01657 528 EEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQEV 606 (1054)
T ss_pred ECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHHH
Confidence 00 24688899999999999999999864 356789999999999999974 3457788999
Q ss_pred HHHHHHhhhhhhhhhhcccCCC--------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 013242 125 INKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIA 196 (447)
Q Consensus 125 ~~~~~~~G~r~l~vA~~~~~~~--------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a 196 (447)
+++|+++|+|||++||+++++. ++++.|++|+|+|+++|+||+||+++++|+.|+++||+|+|+|||++.||
T Consensus 607 ~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA 686 (1054)
T TIGR01657 607 LKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTA 686 (1054)
T ss_pred HHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 9999999999999999998742 23567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc---------------------------------------------------ccccCCcchhh--
Q 013242 197 KETGRRLGMGTNMYPS---------------------------------------------------SALSGQDRDES-- 223 (447)
Q Consensus 197 ~~ia~~lGi~~~~~~~---------------------------------------------------~~~~~~~~~~~-- 223 (447)
.++|+++||.++.... .++.|......
T Consensus 687 ~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~ 766 (1054)
T TIGR01657 687 VHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQA 766 (1054)
T ss_pred HHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHH
Confidence 9999999996432100 01112111110
Q ss_pred hhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCCh
Q 013242 224 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 303 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~ 303 (447)
.....+.+++.++.+|||++|+||.++|+.+|+.|+.|+|+|||+||+||||+|||||||+++ + |..|||+++.++++
T Consensus 767 ~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~ 844 (1054)
T TIGR01657 767 HSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASI 844 (1054)
T ss_pred hhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcH
Confidence 111234567788899999999999999999999999999999999999999999999999875 3 44899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHH
Q 013242 304 NVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 304 ~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l 354 (447)
++|..+|++||+++.++++.+.|.+ .++...+.+.+ +.....|+..+|++
T Consensus 845 ~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l 895 (1054)
T TIGR01657 845 SCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFL 895 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHH
Confidence 9999999999999999999998887 44443333222 22334688888876
No 14
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.8e-57 Score=500.86 Aligned_cols=343 Identities=29% Similarity=0.458 Sum_probs=280.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecc-c---C--CC-------------------ChHHHHHHHHHhcCCC--------
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIF-A---G--GV-------------------DADTVVLMAARASQVE-------- 47 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~-~---~--~~-------------------~~~~~l~~a~~~~~~~-------- 47 (447)
+|+||||||||||+|+|+|.+++.... . . +. ...+++..++.|+...
T Consensus 324 v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 403 (884)
T TIGR01522 324 VNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTL 403 (884)
T ss_pred ccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCc
Confidence 689999999999999999998753210 0 0 00 1134555666554331
Q ss_pred CCChHHHHHHHhhCCc--hhhhccceEEEEEecCCCCceEEEEEEe-cCCeEEEEEcCcHHHHHhhccC-----------
Q 013242 48 NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHN----------- 113 (447)
Q Consensus 48 ~~~pi~~ai~~~~~~~--~~~~~~~~~~~~~pF~~~~kr~~v~~~~-~~g~~~~~~KGa~e~i~~~~~~----------- 113 (447)
..||+|.|++.++... ...+..++.++.+||+|.+|||++++++ .+++++.++||+||.|+..|..
T Consensus 404 ~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l 483 (884)
T TIGR01522 404 LGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTL 483 (884)
T ss_pred CCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeC
Confidence 1369999999886532 2234568899999999999999998876 3577899999999999999962
Q ss_pred ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcH
Q 013242 114 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 193 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~ 193 (447)
+++.++.+.+.+++++++|+|++++||+++ +++|+|+|+++++|||||+++++|+.|+++||+++|+|||+.
T Consensus 484 ~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~ 555 (884)
T TIGR01522 484 TQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQ 555 (884)
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCH
Confidence 123456678888999999999999999874 467999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhH
Q 013242 194 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 273 (447)
Q Consensus 194 ~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~a 273 (447)
.+|.++|+++||.... ...+.|.+.+ .+...++.+++.+..+|||++|+||..+|+.+|++|+.|+|+|||.||+||
T Consensus 556 ~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pA 632 (884)
T TIGR01522 556 ETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPA 632 (884)
T ss_pred HHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHH
Confidence 9999999999997532 2334444433 233344667788889999999999999999999999999999999999999
Q ss_pred HhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHH
Q 013242 274 LKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDT 350 (447)
Q Consensus 274 l~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~ 350 (447)
++.|||||||| ++++.++++||+++++++++.|..++++||++|+|+++++.|.+ .++....+..++. +....|+.+
T Consensus 633 l~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~ 712 (884)
T TIGR01522 633 LKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNA 712 (884)
T ss_pred HHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH
Confidence 99999999998 69999999999999999999999999999999999999999999 5544444433333 345679999
Q ss_pred HHHH
Q 013242 351 VIAI 354 (447)
Q Consensus 351 ~~~l 354 (447)
+++|
T Consensus 713 ~qiL 716 (884)
T TIGR01522 713 MQIL 716 (884)
T ss_pred HHHH
Confidence 9998
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.2e-56 Score=500.99 Aligned_cols=331 Identities=21% Similarity=0.317 Sum_probs=262.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCC--C-------------------------------C---------------
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGG--V-------------------------------D--------------- 32 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~--~-------------------------------~--------------- 32 (447)
|++||+|||||||+|+|++.+++++....+ . +
T Consensus 359 v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1057)
T TIGR01652 359 VEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAK 438 (1057)
T ss_pred eeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhH
Confidence 689999999999999999999875311000 0 0
Q ss_pred -hHHHHHHHHHhcCC-------C-------CCChHHHHHHHhhCCch------------------hhhccceEEEEEecC
Q 013242 33 -ADTVVLMAARASQV-------E-------NLDVIDAAIVGMLADPK------------------EARADIQEVHFLPFD 79 (447)
Q Consensus 33 -~~~~l~~a~~~~~~-------~-------~~~pi~~ai~~~~~~~~------------------~~~~~~~~~~~~pF~ 79 (447)
..+.+..++.|+.. . ..+|.|.|++.++...+ .....|++++.+||+
T Consensus 439 ~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~ 518 (1057)
T TIGR01652 439 RINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFN 518 (1057)
T ss_pred HHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccC
Confidence 02344444444321 1 24799999998753221 122468899999999
Q ss_pred CCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC-ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc----------
Q 013242 80 PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---------- 148 (447)
Q Consensus 80 ~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~---------- 148 (447)
|.+|||++++++.+|++++++||||+.|+++|.. +++..+.+.+.+++|+++|+|||++|++.+++++.
T Consensus 519 s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a 598 (1057)
T TIGR01652 519 SDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEA 598 (1057)
T ss_pred CCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHH
Confidence 9999999999988888899999999999999974 34566788999999999999999999999875421
Q ss_pred ---------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcc
Q 013242 149 ---------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS 213 (447)
Q Consensus 149 ---------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~ 213 (447)
+..|++|+|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|+++|+.++.....
T Consensus 599 ~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~ 678 (1057)
T TIGR01652 599 STALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQI 678 (1057)
T ss_pred HhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEE
Confidence 34689999999999999999999999999999999999999999999999999999975432111
Q ss_pred ---------------------------------------cccCCcchhhhhc---CChhHHHhhcc--chhccChhhHHH
Q 013242 214 ---------------------------------------ALSGQDRDESIVA---LPVDELIEKAD--GFAGVFPEHKYE 249 (447)
Q Consensus 214 ---------------------------------------~~~~~~~~~~~~~---~~~~~~~~~~~--v~a~~~p~~K~~ 249 (447)
++.|...+..... ..+.+++..+. +|||++|+||++
T Consensus 679 ~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~ 758 (1057)
T TIGR01652 679 VITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKAD 758 (1057)
T ss_pred EEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHH
Confidence 2233322211111 11233455555 899999999999
Q ss_pred HHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEEecC-chHHHHhhcchhccCCChhHHHHHH-HHHHHHHHHHHHHHHH
Q 013242 250 IVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAV-LISRAIFQRMRNYMVR 326 (447)
Q Consensus 250 iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa~~~-a~~~a~~aAD~vl~~~~~~~i~~~i-~~~r~~~~~i~~~~~~ 326 (447)
+|+.+|+. |+.|+|+|||+||+|||++|||||++.+ ...+|+.+||+++.+ |+.+..++ .+||++|+|+++++.|
T Consensus 759 IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 759 VVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 99999998 9999999999999999999999999853 334688999999975 99999998 6699999999999999
Q ss_pred HH-hHHHH
Q 013242 327 GI-DGLSS 333 (447)
Q Consensus 327 ~~-~~~~~ 333 (447)
.+ .++..
T Consensus 837 ~~~kn~~~ 844 (1057)
T TIGR01652 837 FFYKNLIF 844 (1057)
T ss_pred HHHHHHHH
Confidence 99 44433
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.5e-54 Score=460.48 Aligned_cols=275 Identities=24% Similarity=0.373 Sum_probs=235.4
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|+||||||||||+|++.+.+.. . ..+.+.++++..++.++..++ ||++.|++.++...+.. ......+++||++
T Consensus 298 v~vI~~DKTGTLT~Gn~~~~~~~-~--~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~ 372 (673)
T PRK14010 298 VNVLILDKTGTITYGNRMADAFI-P--VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHID-LPQEVGEYIPFTA 372 (673)
T ss_pred CCEEEEeCCCcCCCCCeEEEEEE-e--CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCC-chhhhcceecccc
Confidence 68999999999999888776632 1 235566778888888776555 59999999876432110 0112245689999
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCC-hhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEE
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG 159 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG 159 (447)
.+|+|++.+ +|+ .+.||+++.+++.|... ...+..+++..++++++|+|+++++.+ ++++|
T Consensus 373 ~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~-------------~~~lG 434 (673)
T PRK14010 373 ETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED-------------NEILG 434 (673)
T ss_pred ccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC-------------CEEEE
Confidence 999999864 243 56699999999998632 223344667778899999999988643 49999
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 160 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
++++.||+|||++++|++||++||+++|+|||++.+|.++|+++|++ ++|
T Consensus 435 ~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------------------------~v~ 484 (673)
T PRK14010 435 VIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------------------------RFV 484 (673)
T ss_pred EEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------------eEE
Confidence 99999999999999999999999999999999999999999999996 479
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQR 319 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~ 319 (447)
++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||+++++.|+++||+|+++++|+.|.+++++||++|.|
T Consensus 485 A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n 564 (673)
T PRK14010 485 AECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564 (673)
T ss_pred cCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 013242 320 MRNYMVRGI 328 (447)
Q Consensus 320 i~~~~~~~~ 328 (447)
+++++.|.+
T Consensus 565 ~~~~~~f~~ 573 (673)
T PRK14010 565 RGSLTTFSI 573 (673)
T ss_pred HHHHHheee
Confidence 999999998
No 17
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3e-54 Score=483.99 Aligned_cols=326 Identities=21% Similarity=0.276 Sum_probs=259.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCC-----------------------------------------CC-h-----
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGG-----------------------------------------VD-A----- 33 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~-----------------------------------------~~-~----- 33 (447)
|++||+|||||||+|+|.+.++.+....+| .+ .
T Consensus 453 V~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 532 (1178)
T PLN03190 453 IKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHV 532 (1178)
T ss_pred ceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHH
Confidence 689999999999999999999876321000 00 0
Q ss_pred HHHHHHHHHhcCC-----C-------------CCChHHHHHHHhhCCch----------------hhhccceEEEEEecC
Q 013242 34 DTVVLMAARASQV-----E-------------NLDVIDAAIVGMLADPK----------------EARADIQEVHFLPFD 79 (447)
Q Consensus 34 ~~~l~~a~~~~~~-----~-------------~~~pi~~ai~~~~~~~~----------------~~~~~~~~~~~~pF~ 79 (447)
.+.+...+.|+.. + ..+|.|.|++.++...+ ..+..|++++.+||+
T Consensus 533 ~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~ 612 (1178)
T PLN03190 533 HDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFD 612 (1178)
T ss_pred HHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEeccc
Confidence 1234444444322 1 12689999998764322 245678999999999
Q ss_pred CCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC--ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc---------
Q 013242 80 PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN--KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--------- 148 (447)
Q Consensus 80 ~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~--~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~--------- 148 (447)
|.+|||++++++.+|++.+|+||||+.|+++|.. +.+..+++.+.+++|+++|+|||++|||.++++++
T Consensus 613 S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 613 SDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred ccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 9999999999988888999999999999999974 24567788999999999999999999999975422
Q ss_pred ----------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc
Q 013242 149 ----------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS 212 (447)
Q Consensus 149 ----------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~ 212 (447)
+.+|++|+|+|+++++||||++++++|+.|+++||+|||+|||+..+|.+||+++||.++....
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 3468999999999999999999999999999999999999999999999999999997543221
Q ss_pred ccc-----------------------------------------------cCCcchhhhh---cCChhHHHhhcc--chh
Q 013242 213 SAL-----------------------------------------------SGQDRDESIV---ALPVDELIEKAD--GFA 240 (447)
Q Consensus 213 ~~~-----------------------------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~a 240 (447)
..+ .|........ ...+.++..++. +||
T Consensus 773 i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~c 852 (1178)
T PLN03190 773 IIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCC 852 (1178)
T ss_pred EEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEe
Confidence 111 1111111111 012334555555 699
Q ss_pred ccChhhHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHH-HHHHH
Q 013242 241 GVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLI-SRAIF 317 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~-~r~~~ 317 (447)
|++|.||+++|+.+|+. +++|+|||||+||++||++|||||++. ....+|..+||+++.+ |..+.+++.. ||+.|
T Consensus 853 R~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y 930 (1178)
T PLN03190 853 RVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNY 930 (1178)
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHH
Confidence 99999999999999997 579999999999999999999999974 4556888899999966 9999999985 99999
Q ss_pred HHHHHHHHHHH
Q 013242 318 QRMRNYMVRGI 328 (447)
Q Consensus 318 ~~i~~~~~~~~ 328 (447)
+|+...+.|.|
T Consensus 931 ~R~s~~i~y~f 941 (1178)
T PLN03190 931 QRMGYMILYNF 941 (1178)
T ss_pred HHHHHHHHHHH
Confidence 99999999998
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.8e-53 Score=451.20 Aligned_cols=276 Identities=26% Similarity=0.388 Sum_probs=238.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCc-h--hhhccceEEEEEe
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARADIQEVHFLP 77 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~-~--~~~~~~~~~~~~p 77 (447)
+|+||||||||||+|+|++.+.+. ..+.+.++++.+++.++..++| |+++|++.++... + .....++..+++|
T Consensus 298 v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~~~~~~~~~p 373 (679)
T PRK01122 298 VDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDLQSLHATFVP 373 (679)
T ss_pred CCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhhccccceeEe
Confidence 689999999999999999987542 2467788888989888887665 9999999876531 1 1111245678899
Q ss_pred cCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCC-hhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcE
Q 013242 78 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 156 (447)
Q Consensus 78 F~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~ 156 (447)
|++.++++++.+ +| ..+.||+++.+++.|... ...++.+++.+++++++|+|++++|++. +
T Consensus 374 F~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~-------------~ 435 (679)
T PRK01122 374 FSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN-------------R 435 (679)
T ss_pred ecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-------------e
Confidence 999988887653 34 578999999999999532 3345678888899999999999999754 9
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 157 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
++|+++++||+||+++++|++||++||+++|+|||++.+|..+|+++|++
T Consensus 436 ~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId------------------------------ 485 (679)
T PRK01122 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------ 485 (679)
T ss_pred EEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------------
Confidence 99999999999999999999999999999999999999999999999996
Q ss_pred cchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 237 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
++|++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||+++++.|+++||+|++++||..|.+++++||++
T Consensus 486 ~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~ 565 (679)
T PRK01122 486 DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQL 565 (679)
T ss_pred EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013242 317 FQRMRNYMVRGI 328 (447)
Q Consensus 317 ~~~i~~~~~~~~ 328 (447)
.-.--....|++
T Consensus 566 ~~tr~~~~~f~~ 577 (679)
T PRK01122 566 LMTRGALTTFSI 577 (679)
T ss_pred HhhhHhhhhhhH
Confidence 843334466666
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-53 Score=438.31 Aligned_cols=352 Identities=27% Similarity=0.423 Sum_probs=288.2
Q ss_pred cEEEecchhhcccCceEEEeeEeecccCCC----------------ChHHHHHHHHHhcCC---------------CCCC
Q 013242 2 DVLCCDKTGTLTLNKLTVDKNLIEIFAGGV----------------DADTVVLMAARASQV---------------ENLD 50 (447)
Q Consensus 2 ~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~----------------~~~~~l~~a~~~~~~---------------~~~~ 50 (447)
++||+|||||||+|.|+|...|.+...... .-..+++.+..|++. .+.|
T Consensus 367 s~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~ 446 (1019)
T KOG0203|consen 367 STICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGD 446 (1019)
T ss_pred eeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCC
Confidence 589999999999999999987743211111 112456666666542 3457
Q ss_pred hHHHHHHHhhC----CchhhhccceEEEEEecCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhcc----------C
Q 013242 51 VIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLH----------N 113 (447)
Q Consensus 51 pi~~ai~~~~~----~~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~---~g~~~~~~KGa~e~i~~~~~----------~ 113 (447)
+.+.|++++.. +..+.|..++.+..+||||++|..-.+.... +.+..+++|||||.++++|+ .
T Consensus 447 ~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pl 526 (1019)
T KOG0203|consen 447 ASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPL 526 (1019)
T ss_pred HHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCc
Confidence 89999998753 3356688888899999999999988877653 35788999999999999997 3
Q ss_pred ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCC
Q 013242 114 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG 182 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~G 182 (447)
++...+.+++...++...|.||+++|++.+++..+ ..+-.+|.|+|++++-||||..+++++..|+.+|
T Consensus 527 d~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAG 606 (1019)
T KOG0203|consen 527 DEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAG 606 (1019)
T ss_pred CHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhC
Confidence 45677889999999999999999999999986532 3456889999999999999999999999999999
Q ss_pred CeEEEEcCCcHHHHHHHHHHhCCCCCCC------------C----------cccccCCcchhhhhcCChhHHHhhcc--c
Q 013242 183 LGVKMITGDQLAIAKETGRRLGMGTNMY------------P----------SSALSGQDRDESIVALPVDELIEKAD--G 238 (447)
Q Consensus 183 i~v~miTGd~~~~a~~ia~~lGi~~~~~------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~--v 238 (447)
|+|+|+|||++.||+++|+++||..... + ..++.|.+.. .+....+++++.++. +
T Consensus 607 IkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld~il~nh~eIV 685 (1019)
T KOG0203|consen 607 IKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLDELLQNHQEIV 685 (1019)
T ss_pred ceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHHHHHHhCCceE
Confidence 9999999999999999999999754211 0 1123333322 344455777777665 8
Q ss_pred hhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHH
Q 013242 239 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIF 317 (447)
Q Consensus 239 ~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~ 317 (447)
|||.+|+||..||+..|++|.+|+.+|||+||+||||+|||||||| .++|++|+|||++|++++|.+|+..+++||-+|
T Consensus 686 FARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiF 765 (1019)
T KOG0203|consen 686 FARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIF 765 (1019)
T ss_pred EEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehh
Confidence 9999999999999999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-hHHH-HHHHHHHHhhcccccHHHHHHH
Q 013242 318 QRMRNYMVRGI-DGLS-STEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 318 ~~i~~~~~~~~-~~~~-~~~~l~~~~~~~~~pl~~~~~l 354 (447)
+|+||.+.|.+ .++- +..||++.++...+|+..+.+|
T Consensus 766 DNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL 804 (1019)
T KOG0203|consen 766 DNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTIL 804 (1019)
T ss_pred hhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhh
Confidence 99999999999 4433 3445555555667899999998
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.5e-50 Score=427.85 Aligned_cols=277 Identities=26% Similarity=0.356 Sum_probs=241.5
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhh--hccceEEEEEec
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQEVHFLPF 78 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~~~~~~pF 78 (447)
+|+||||||||||+|+|++.+.+. ..+.+.++++.+++.++..++| |+++|++.++...+.. ...++..++.||
T Consensus 299 v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf 374 (675)
T TIGR01497 299 VDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQSLHATFVEF 374 (675)
T ss_pred CCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccccccceEEEE
Confidence 689999999999999999987542 2467788899999888877665 9999999876532111 112345678999
Q ss_pred CCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC-ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEE
Q 013242 79 DPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 157 (447)
Q Consensus 79 ~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~ 157 (447)
++.++++.+.+. +| ..+.||+++.+++.|.. ....+..+++.+++++++|+|++++|++. ++
T Consensus 375 ~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~-------------~~ 437 (675)
T TIGR01497 375 TAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN-------------RI 437 (675)
T ss_pred cCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC-------------EE
Confidence 999877766443 34 57899999999988853 22345667888899999999999999864 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhcc
Q 013242 158 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 237 (447)
Q Consensus 158 lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (447)
+|++++.||+||+++++|++|+++||+++|+|||+..+|..+|+++|++ +
T Consensus 438 lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~------------------------------~ 487 (675)
T TIGR01497 438 YGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------------------------D 487 (675)
T ss_pred EEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------E
Confidence 9999999999999999999999999999999999999999999999996 4
Q ss_pred chhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHH
Q 013242 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 317 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~ 317 (447)
++++++|++|.++|+.+|++|+.|+|+|||.||+|||++||+||||+++++.++++||+|++++||+.|.+++++||+++
T Consensus 488 v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~ 567 (675)
T TIGR01497 488 FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLL 567 (675)
T ss_pred EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 013242 318 QRMRNYMVRGI 328 (447)
Q Consensus 318 ~~i~~~~~~~~ 328 (447)
-+......|++
T Consensus 568 ~t~~~~~t~~~ 578 (675)
T TIGR01497 568 ITRGALTTFSI 578 (675)
T ss_pred HHHHHHheeee
Confidence 88888888887
No 21
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-50 Score=425.11 Aligned_cols=306 Identities=30% Similarity=0.379 Sum_probs=248.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|+++||||||||+|+|.|.+.. ... + ++++++.+|+..+..++| |++.||+.++.+.+ ....+..+.+|
T Consensus 405 v~tvvFDKTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~~~~i~--- 474 (713)
T COG2217 405 VDTVVFDKTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVEDFEEIP--- 474 (713)
T ss_pred CCEEEEeCCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccceeeec---
Confidence 68999999999999999998854 232 3 889999999999998877 99999999765432 11222233333
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
.+ .+.. ..+| ..+..|++.++.+.- .+... .....+.+.++|..++.++.++ +++|+
T Consensus 475 --G~-Gv~~-~v~g--~~v~vG~~~~~~~~~---~~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~ 531 (713)
T COG2217 475 --GR-GVEA-EVDG--ERVLVGNARLLGEEG---IDLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGV 531 (713)
T ss_pred --cC-cEEE-EECC--EEEEEcCHHHHhhcC---CCccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEE
Confidence 11 1111 1245 567789999987532 11222 5666788889999999999987 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+++.|++||+++++|++||+.|++++|+|||+..+|..+|+++||+ ++++
T Consensus 532 i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~A 581 (713)
T COG2217 532 IALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRA 581 (713)
T ss_pred EEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hhec
Confidence 9999999999999999999999999999999999999999999996 5799
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|++|.++|+.||++|+.|+|+|||+||+|+|..||||||||.++|.|+++||+|+++++++.+..+|..||+++++|
T Consensus 582 ellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~I 661 (713)
T COG2217 582 ELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRII 661 (713)
T ss_pred cCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhcccccHHHHHHHHHhcccCCcccchhHHHHHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 374 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~w 374 (447)
|+|+.|++.++...+.+.++. ++ .|+.-...+.+++..+..++.|...|
T Consensus 662 kqNl~~A~~yn~~~iplA~~g---~l--~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 662 KQNLFWAFGYNAIAIPLAAGG---LL--TPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---hc--CHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 999999994444443333332 11 12222367788888888777776654
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-49 Score=434.19 Aligned_cols=326 Identities=22% Similarity=0.281 Sum_probs=260.1
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCC--------------------------------------------hHHH
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--------------------------------------------ADTV 36 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~--------------------------------------------~~~~ 36 (447)
|++|++|||||||+|.|.+.+|.|....+|.. ..+.
T Consensus 387 v~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f 466 (1151)
T KOG0206|consen 387 VEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEF 466 (1151)
T ss_pred eeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHH
Confidence 67999999999999999999988753322211 0123
Q ss_pred HHHHHHhcCC-------------CCCChHHHHHHHhhCCch----------------hhhccceEEEEEecCCCCceEEE
Q 013242 37 VLMAARASQV-------------ENLDVIDAAIVGMLADPK----------------EARADIQEVHFLPFDPTGKRTAL 87 (447)
Q Consensus 37 l~~a~~~~~~-------------~~~~pi~~ai~~~~~~~~----------------~~~~~~~~~~~~pF~~~~kr~~v 87 (447)
+...+.|... ....|.+.|++..+.+.+ .....|++++.++|+|.||||+|
T Consensus 467 ~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSV 546 (1151)
T KOG0206|consen 467 FRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSV 546 (1151)
T ss_pred hhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEE
Confidence 3344444311 112477888887654211 12457999999999999999999
Q ss_pred EEEecCCeEEEEEcCcHHHHHhhcc-CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc------------------
Q 013242 88 TYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK------------------ 148 (447)
Q Consensus 88 ~~~~~~g~~~~~~KGa~e~i~~~~~-~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~------------------ 148 (447)
++++++|+..+|||||+..|.+++. ......++..+++++|+.+|+|+||+||+.++++++
T Consensus 547 IVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re 626 (1151)
T KOG0206|consen 547 IVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDRE 626 (1151)
T ss_pred EEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHH
Confidence 9999999999999999999999998 556778888999999999999999999999987753
Q ss_pred -------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCc--
Q 013242 149 -------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD-- 219 (447)
Q Consensus 149 -------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~-- 219 (447)
+.+|++|+++|..++||+++++++++|+.|+++|||+||+|||..+||.+|+..|++..+......+....
T Consensus 627 ~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~ 706 (1151)
T KOG0206|consen 627 ELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE 706 (1151)
T ss_pred HHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh
Confidence 35689999999999999999999999999999999999999999999999999999976544322222111
Q ss_pred -------------------------------------------chhhhhcC---ChhHHHh--hccchhccChhhHHHHH
Q 013242 220 -------------------------------------------RDESIVAL---PVDELIE--KADGFAGVFPEHKYEIV 251 (447)
Q Consensus 220 -------------------------------------------~~~~~~~~---~~~~~~~--~~~v~a~~~p~~K~~iV 251 (447)
....+... .+.++.. ++.++||++|.||+.+|
T Consensus 707 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv 786 (1151)
T KOG0206|consen 707 ELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVV 786 (1151)
T ss_pred hhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHH
Confidence 10000000 1112222 34579999999999999
Q ss_pred HHHhh-cCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHH-HHHHHHHHHHHHHHHH
Q 013242 252 KHLQA-RNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLI-SRAIFQRMRNYMVRGI 328 (447)
Q Consensus 252 ~~lq~-~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~-~r~~~~~i~~~~~~~~ 328 (447)
+..++ .+..+++||||+||++|++.|||||+++ ....+|..+||+.+.. |.-+..++.. ||+.|.|+.+++.|++
T Consensus 787 ~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfF 864 (1151)
T KOG0206|consen 787 KLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFF 864 (1151)
T ss_pred HHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHH
Confidence 99975 4889999999999999999999999996 5778888999999977 8888777765 9999999999999999
No 23
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-48 Score=403.50 Aligned_cols=324 Identities=26% Similarity=0.291 Sum_probs=261.8
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
|++++||||||||+|++.|.+.. ......+..+++.+++..+..+.| |+.+||+.|+.+..........+.+--|..
T Consensus 582 v~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 582 VKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGVLSFEYFPG 658 (951)
T ss_pred CCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCccccceeecccC
Confidence 68999999999999999999854 344447888999888888877766 999999999875442211112222222332
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
..+...+. .+|+. ++.|+.+++...- ....+.++...++-...|..+.++++++ +++|+
T Consensus 659 ~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv 717 (951)
T KOG0207|consen 659 EGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QLVGV 717 (951)
T ss_pred CCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEE
Confidence 22221111 23333 7889999987632 3345567788888889999999999998 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.++|++|||+..+|..||+.||+++|+||||..+|..+|+++|++ .+|+
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~a 767 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYA 767 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEe
Confidence 9999999999999999999999999999999999999999999986 5899
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|+||.++|+.+|++++.|+|+|||+||+|+|.+|||||+|+.+++.|.++||+|++.|++..++.+|..||+++.|+
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccc-ccHHHHHHHHHhcccCCcccchhHHHHHHHHHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFL-FTLDTVIAILQTAFTSKKDFGKEERELLWAHAQ 378 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~ 378 (447)
|.|+.|++.+++..+.+.++.++++ +-|.|..--..+++++.+++-.+.....|..+.
T Consensus 848 k~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 848 KLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred HHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9999999944444444555554433 223333333888999999987777777776665
No 24
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-47 Score=402.32 Aligned_cols=256 Identities=25% Similarity=0.356 Sum_probs=214.1
Q ss_pred cceEEEEEecCCCCceEEEEEEe-cCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC-
Q 013242 69 DIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG- 146 (447)
Q Consensus 69 ~~~~~~~~pF~~~~kr~~v~~~~-~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~- 146 (447)
.+.+++.+||+|.-+||+|++.+ .+.+...|+|||||.|.+.|. .+.++..+++.++.|+.+|+|++++|+|.++..
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~ 678 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETST 678 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcch
Confidence 47789999999999999999997 456789999999999999996 456788999999999999999999999999865
Q ss_pred -------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc-------
Q 013242 147 -------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS------- 212 (447)
Q Consensus 147 -------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~------- 212 (447)
+++..|++++|+|++.|++++|+.++.+|++|.+++|+++|+||||..||..+|+.|||..+....
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 467899999999999999999999999999999999999999999999999999999997521100
Q ss_pred --------ccc--------------------------------------cCCcchhhh--hcCChhHHHhhccchhccCh
Q 013242 213 --------SAL--------------------------------------SGQDRDESI--VALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 213 --------~~~--------------------------------------~~~~~~~~~--~~~~~~~~~~~~~v~a~~~p 244 (447)
..+ .|+...-.. ...-++.++.++.+||||+|
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP 838 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSP 838 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCc
Confidence 000 000000000 00113356678889999999
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 324 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~ 324 (447)
.||.++|+.+|+.|+.|+|+|||+||+.|||+||+||+.+++. |.-||.+.-.-++.+.+...|++||+.+-.--..+
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999998654 56789999888899999999999999765544444
Q ss_pred HHH
Q 013242 325 VRG 327 (447)
Q Consensus 325 ~~~ 327 (447)
.|.
T Consensus 917 kYM 919 (1140)
T KOG0208|consen 917 KYM 919 (1140)
T ss_pred HHH
Confidence 443
No 25
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-48 Score=392.35 Aligned_cols=280 Identities=21% Similarity=0.265 Sum_probs=226.9
Q ss_pred hccceEEEEEecCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCC
Q 013242 67 RADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE 145 (447)
Q Consensus 67 ~~~~~~~~~~pF~~~~kr~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~ 145 (447)
..+|+++..+||+|+.|||.+++++. +|+...|.|||+..|..... ..+++++...+||++|+|+|.+|.+.+++
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~ 611 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSE 611 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCH
Confidence 34799999999999999999999985 78999999999999887654 34578888999999999999999999987
Q ss_pred CCcC--------------------------CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Q 013242 146 GSKE--------------------------SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET 199 (447)
Q Consensus 146 ~~~~--------------------------~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~i 199 (447)
++++ ..|.+++++|+.+.||++++|++.+++.|+++||+|||+|||..+||..+
T Consensus 612 ~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ci 691 (1051)
T KOG0210|consen 612 EEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICI 691 (1051)
T ss_pred HHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeee
Confidence 6421 34899999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCC--------------------------CCcccccCCcchhhhhc--CChhHHHh--hccchhccChhhHHH
Q 013242 200 GRRLGMGTNM--------------------------YPSSALSGQDRDESIVA--LPVDELIE--KADGFAGVFPEHKYE 249 (447)
Q Consensus 200 a~~lGi~~~~--------------------------~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~v~a~~~p~~K~~ 249 (447)
|+..++.+-. ....++.|++.+-.+.. .++-++.. .+.++|||+|.||++
T Consensus 692 AkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~ 771 (1051)
T KOG0210|consen 692 AKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQ 771 (1051)
T ss_pred ehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHH
Confidence 9999987521 12233444443322211 12223332 234799999999999
Q ss_pred HHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEEe-cCchHHHHhhcchhccCCChhHHHHHHHH-HHHHHHHHHHHHHH
Q 013242 250 IVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVLI-SRAIFQRMRNYMVR 326 (447)
Q Consensus 250 iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa~-~~a~~~a~~aAD~vl~~~~~~~i~~~i~~-~r~~~~~i~~~~~~ 326 (447)
+++.+|++ |..|++||||-||++|++.||+||++ |+...+|.-|||+.+++ |+.+.+++.+ ||..|+|-.+...|
T Consensus 772 v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqf 849 (1051)
T KOG0210|consen 772 VVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQF 849 (1051)
T ss_pred HHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHH
Confidence 99999986 88999999999999999999999998 57888899999999977 9999999998 99999999999999
Q ss_pred HH-hHHHHHHHHHHHh-hcccccHHHHH
Q 013242 327 GI-DGLSSTEFIQVLE-LNFLFTLDTVI 352 (447)
Q Consensus 327 ~~-~~~~~~~~l~~~~-~~~~~pl~~~~ 352 (447)
.+ .|+.+.+...++- ++.|.|+.+.+
T Consensus 850 ViHRGL~Is~~Qavfs~v~yF~~V~Lyq 877 (1051)
T KOG0210|consen 850 VIHRGLIISTMQAVFSSVFYFAPVALYQ 877 (1051)
T ss_pred HHhhhHHHHHHHHHHHHHhhhcchHHhh
Confidence 98 5554444433322 23344444443
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4.7e-44 Score=389.52 Aligned_cols=299 Identities=27% Similarity=0.304 Sum_probs=236.3
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|||||||||+|+|+|.+.. . ..+.++++++.+++..+..++ ||+++|++.++.+. ++ .+||.+
T Consensus 436 v~~v~fDKTGTLT~g~~~v~~~~--~-~~~~~~~~~l~~aa~~e~~s~-hPia~Ai~~~a~~~-----~~----~~~~~~ 502 (741)
T PRK11033 436 VTTVAFDKTGTLTEGKPQVTDIH--P-ATGISESELLALAAAVEQGST-HPLAQAIVREAQVR-----GL----AIPEAE 502 (741)
T ss_pred CCEEEEeCCCCCcCCceEEEEEE--e-cCCCCHHHHHHHHHHHhcCCC-CHHHHHHHHHHHhc-----CC----CCCCCc
Confidence 68999999999999999998853 2 235678889999888776655 59999999876432 11 146665
Q ss_pred CCceEEEE-EE-ecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEE
Q 013242 81 TGKRTALT-YI-DSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFI 158 (447)
Q Consensus 81 ~~kr~~v~-~~-~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~l 158 (447)
..+.+.-. ++ ..+|.. +..|+++.+.+ ..+.+...++++..+|+++++|+++. +++
T Consensus 503 ~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~ 560 (741)
T PRK11033 503 SQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVL 560 (741)
T ss_pred ceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEE
Confidence 55554321 21 134543 45689998765 12345556778899999999999875 999
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccc
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 238 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 238 (447)
|+++|+|++||+++++|++|++.|++++|+|||+..++..+++++||. .
T Consensus 561 g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~ 609 (741)
T PRK11033 561 GLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------F 609 (741)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------e
Confidence 999999999999999999999999999999999999999999999994 3
Q ss_pred hhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHH
Q 013242 239 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQ 318 (447)
Q Consensus 239 ~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~ 318 (447)
++++.|++|..+|+.+|+. +.|+|+|||.||+|||+.|||||+|+++++.++++||+++..+++..|..++.+||++++
T Consensus 610 ~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~ 688 (741)
T PRK11033 610 RAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHA 688 (741)
T ss_pred ecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHH
Confidence 5778999999999999965 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHHHHhcccCCcccchhHHHH
Q 013242 319 RMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEEREL 372 (447)
Q Consensus 319 ~i~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~ 372 (447)
||++|+.|++ ++...+.+..+++ +|+.. -.+.+..++..+..++.|..
T Consensus 689 ~I~~nl~~a~~~n~~~i~~a~~g~----~~~~~--a~~~~~~ss~~v~~Nslrl~ 737 (741)
T PRK11033 689 NIRQNITIALGLKAIFLVTTLLGI----TGLWL--AVLADSGATALVTANALRLL 737 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----hHHHH--HHHHHcChHHHHHHHHHhhc
Confidence 9999999999 5544443333222 22111 12444455555555555544
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.7e-43 Score=370.21 Aligned_cols=251 Identities=36% Similarity=0.547 Sum_probs=217.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|||||||||+|+|+|.++++. . + +. ...||++.|++.++... .++..||++
T Consensus 230 v~~i~fDKTGTLT~~~~~v~~~~~~--~-~-------------~~-~s~hp~~~ai~~~~~~~--------~~~~~~f~~ 284 (499)
T TIGR01494 230 VDYICSDKTGTLTKNEMSFKKVSVL--G-G-------------EY-LSGHPDERALVKSAKWK--------ILNVFEFSS 284 (499)
T ss_pred CcEEEeeCCCccccCceEEEEEEec--C-C-------------Cc-CCCChHHHHHHHHhhhc--------CcceeccCC
Confidence 6899999999999999999986531 1 1 12 23469999999876531 235689999
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
..++|++++.+.++ .++||+++.+.+.|.. +.+..+++.++|+|++++|++. +++|+
T Consensus 285 ~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~ 341 (499)
T TIGR01494 285 VRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGL 341 (499)
T ss_pred CCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEE
Confidence 99999998875323 4789999999998741 3344556888999999999887 89999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+ ++
T Consensus 342 i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~ 388 (499)
T TIGR01494 342 LGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FA 388 (499)
T ss_pred EEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------ee
Confidence 999999999999999999999999999999999999999999997 58
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
+++|++|.++|+.+|++|+.|+|+|||.||+|||+.|||||+|+ ++.+||+++.++++..+..++.+||++++++
T Consensus 389 ~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i 463 (499)
T TIGR01494 389 RVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTI 463 (499)
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999997 6889999999999999999999999999999
Q ss_pred HHHHHHHH-hHHHHHHHH
Q 013242 321 RNYMVRGI-DGLSSTEFI 337 (447)
Q Consensus 321 ~~~~~~~~-~~~~~~~~l 337 (447)
++++.|++ .++..+++.
T Consensus 464 ~~~~~~~~~~n~~~~~~a 481 (499)
T TIGR01494 464 KSNIFWAIAYNLILIPLA 481 (499)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 99999999 555444333
No 28
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-42 Score=354.26 Aligned_cols=282 Identities=26% Similarity=0.342 Sum_probs=219.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccC--------CCChHHHHHHHHHhc--CC---CCCChHHHHHHHhhCCchhh-
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAG--------GVDADTVVLMAARAS--QV---ENLDVIDAAIVGMLADPKEA- 66 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~--------~~~~~~~l~~a~~~~--~~---~~~~pi~~ai~~~~~~~~~~- 66 (447)
||+.|||||||||...|.|...-- .... ....+.+..+|++.+ .. --.||+++|.+..++..-+.
T Consensus 479 vdvCCFDKTGTLT~d~lvv~Gvag-~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~ 557 (1160)
T KOG0209|consen 479 VDVCCFDKTGTLTEDDLVVEGVAG-LSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKK 557 (1160)
T ss_pred eeEEEecCCCccccccEEEEeccc-ccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccC
Confidence 689999999999999999987321 0111 112233444443332 12 23589999999987542211
Q ss_pred ---------hccceEEEEEecCCCCceEEEEEEec----CCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhh
Q 013242 67 ---------RADIQEVHFLPFDPTGKRTALTYIDS----EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGL 133 (447)
Q Consensus 67 ---------~~~~~~~~~~pF~~~~kr~~v~~~~~----~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~ 133 (447)
-.++++.+.+.|+|.-|||+++.... +-+++..+|||||.|.+++. +.+..+++...+|+++|.
T Consensus 558 ~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~Gs 634 (1160)
T KOG0209|consen 558 NSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGS 634 (1160)
T ss_pred cccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccc
Confidence 12578889999999999999987642 23688999999999999774 677889999999999999
Q ss_pred hhhhhhhcccCC--------CCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 134 RSLAVAYQEVPE--------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 134 r~l~vA~~~~~~--------~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
|||+++|+.++. ..+++.|++|+|.|++.|.-|+|+|++++|+.|++.+++|+|+||||+.||..+|+++||
T Consensus 635 RVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~i 714 (1160)
T KOG0209|consen 635 RVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGI 714 (1160)
T ss_pred eEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeee
Confidence 999999999972 246789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcc---------------------------------------cccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 206 GTNMYPSS---------------------------------------ALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 206 ~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
.....+.. ++.|...+.......+.+++....+|||+.|.|
T Consensus 715 v~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~Q 794 (1160)
T KOG0209|consen 715 VEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQ 794 (1160)
T ss_pred eccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhh
Confidence 75311111 111222221112222345566778999999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCc
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 286 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a 286 (447)
|..++..+++.|+.++|||||.||+.|||+|+||||.-++
T Consensus 795 KE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 795 KEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred HHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 9999999999999999999999999999999999998643
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.3e-40 Score=368.56 Aligned_cols=310 Identities=28% Similarity=0.344 Sum_probs=249.1
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|++|||||||||+|+|+|.+.. .. .+.++++++.+++.++..++| |+++|++.++.+.. ..... .|..
T Consensus 517 v~~v~fDKTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~~-----~~~~ 585 (834)
T PRK10671 517 LDTLVFDKTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQVN-----GFRT 585 (834)
T ss_pred CCEEEEcCCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCcc-----cceE
Confidence 68999999999999999998743 22 356788889998888877665 99999998764211 01111 2222
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
...+ .+... .+|. .+.+|+++++.+... ..+.+...+++++++|.++++++++. .++|+
T Consensus 586 ~~g~-Gv~~~-~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~ 644 (834)
T PRK10671 586 LRGL-GVSGE-AEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAAL 644 (834)
T ss_pred ecce-EEEEE-ECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEE
Confidence 1111 11111 2453 466799998865321 12345666778889999999999876 89999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.+.|++||+++++|++|++.|++++|+|||+..++..+++++|++ .+|+
T Consensus 645 ~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~ 694 (834)
T PRK10671 645 LAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIA 694 (834)
T ss_pred EEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEe
Confidence 9999999999999999999999999999999999999999999995 3688
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+||++++.++++||+++..+++++|..++++||+++.+|
T Consensus 695 ~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i 774 (834)
T PRK10671 695 GVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNM 774 (834)
T ss_pred CCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccc--ccHHHHHHHHHhcccCCcccchhHHHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEEREL 372 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~ 372 (447)
++|+.|++.++...+.+.++++++. +.+.|+.-...|.+++..+..++.|..
T Consensus 775 ~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~ 828 (834)
T PRK10671 775 KQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLL 828 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhc
Confidence 9999999944444444555554432 135555555889999999998887664
No 30
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.2e-39 Score=346.17 Aligned_cols=280 Identities=30% Similarity=0.403 Sum_probs=223.3
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCC--hHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccce-EEEEEe
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ-EVHFLP 77 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~--~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~-~~~~~p 77 (447)
+|++|||||||||+|+|+|.+... . .+.+ .++++.+++.+++..+ ||++.|++.++...+..... + ..+.+|
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~ 320 (556)
T TIGR01525 246 VKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLELPK-QEDVEEVP 320 (556)
T ss_pred CCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCccc-ccCeeEec
Confidence 689999999999999999988542 2 2333 6788888888877655 49999999987532111000 1 111121
Q ss_pred cCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEE
Q 013242 78 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 157 (447)
Q Consensus 78 F~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~ 157 (447)
.+..... .+|. ..+..|+++++. ... .+. ..+...+.+++++|+++++++++. ++
T Consensus 321 ----~~gi~~~---~~g~-~~~~lg~~~~~~-~~~--~~~-~~~~~~~~~~~~~g~~~~~v~~~~-------------~~ 375 (556)
T TIGR01525 321 ----GKGVEAT---VDGQ-EEVRIGNPRLLE-LAA--EPI-SASPDLLNEGESQGKTVVFVAVDG-------------EL 375 (556)
T ss_pred ----CCeEEEE---ECCe-eEEEEecHHHHh-hcC--CCc-hhhHHHHHHHhhCCcEEEEEEECC-------------EE
Confidence 1122222 2342 356679998872 111 111 223455677889999999999865 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 158 IGLIPLFDPPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 158 lG~i~l~d~~r~~~~~~I~~l~~~G-i~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
+|.+.++|+++|+++++|+.|++.| ++++|+|||+..++..+++++|+.
T Consensus 376 ~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------------------ 425 (556)
T TIGR01525 376 LGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------------------ 425 (556)
T ss_pred EEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------------------
Confidence 9999999999999999999999999 999999999999999999999995
Q ss_pred cchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 237 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
++|+++.|++|.++++.++..++.|+|+|||.||++|++.||+||+++++++.++..||+++.+++++.+..++++||++
T Consensus 426 ~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~ 505 (556)
T TIGR01525 426 EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKT 505 (556)
T ss_pred eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHH
Confidence 46888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hHHHHHHHHHHH
Q 013242 317 FQRMRNYMVRGI-DGLSSTEFIQVL 340 (447)
Q Consensus 317 ~~~i~~~~~~~~-~~~~~~~~l~~~ 340 (447)
+++|++|+.|++ +++..+.+..++
T Consensus 506 ~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 506 RRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 655555444333
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.4e-39 Score=343.44 Aligned_cols=266 Identities=31% Similarity=0.453 Sum_probs=217.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|++|||||||||+|+|+|.+.. .. .+.++++++.+++.+++.++| |+++|++.++...+.....+...+.+|
T Consensus 277 v~~i~fDKTGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~~~~~~~--- 349 (562)
T TIGR01511 277 IDTVVFDKTGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVSDFKAIP--- 349 (562)
T ss_pred CCEEEECCCCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCCCeEEEC---
Confidence 68999999999999999998853 22 356778899999888877665 999999988753221111122222222
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
.+.+... .+| ..+..|+++++.+.. ... .++.++|.+++.++.+. +++|+
T Consensus 350 -g~Gi~~~---~~g--~~~~iG~~~~~~~~~---~~~--------~~~~~~g~~~~~~~~~~-------------~~~g~ 399 (562)
T TIGR01511 350 -GIGVEGT---VEG--TKIQLGNEKLLGENA---IKI--------DGKAEQGSTSVLVAVNG-------------ELAGV 399 (562)
T ss_pred -CceEEEE---ECC--EEEEEECHHHHHhCC---CCC--------ChhhhCCCEEEEEEECC-------------EEEEE
Confidence 1122222 234 456789999875421 111 12457888988888765 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.++|++||+++++|++|++.|++++|+|||+...+..+++++|++ +|+
T Consensus 400 ~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~ 448 (562)
T TIGR01511 400 FALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRA 448 (562)
T ss_pred EEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEc
Confidence 9999999999999999999999999999999999999999999993 467
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+|+++++.++.+||+++.+++++.+..++.+||++++++
T Consensus 449 ~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i 528 (562)
T TIGR01511 449 EVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRI 528 (562)
T ss_pred cCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hHHHHH
Q 013242 321 RNYMVRGI-DGLSST 334 (447)
Q Consensus 321 ~~~~~~~~-~~~~~~ 334 (447)
++|+.|++ +++..+
T Consensus 529 ~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 529 KQNLLWAFGYNVIAI 543 (562)
T ss_pred HHHHHHHHHHHHHHH
Confidence 99999999 554444
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.7e-38 Score=335.56 Aligned_cols=261 Identities=31% Similarity=0.428 Sum_probs=213.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|++|||||||||+|+|+|.+... .+++.+++..+.... ||++.|++.++.+.+ .+.....+|.
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~----~~~~~~~~~g-- 309 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQASS-HPLARAIVDYARKRE----NVESVEEVPG-- 309 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccCC-CcHHHHHHHHHHhcC----CCcceEEecC--
Confidence 689999999999999999987431 268888887766555 599999998875421 2222333331
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
+.+... .+|. .+..|+++++.+... ..+..+|.+++.++.+. .++|.
T Consensus 310 --~gi~~~---~~g~--~~~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~-------------~~~g~ 356 (536)
T TIGR01512 310 --EGVRAV---VDGG--EVRIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG-------------TYLGY 356 (536)
T ss_pred --CeEEEE---ECCe--EEEEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC-------------EEEEE
Confidence 111111 2454 345799887654211 14566788888777654 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 161 IPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
+.++|++||+++++|+.|+++|+ +++|+|||+..++..+++++|++ ++|
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------------~~f 406 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------------------EVH 406 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------------hhh
Confidence 99999999999999999999999 99999999999999999999995 358
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQ 318 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~ 318 (447)
+++.|++|..+++.++.+++.|+|+|||.||++|++.||+||+++ ++++.++.+||+++.+++++.+.+++.+||++++
T Consensus 407 ~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~ 486 (536)
T TIGR01512 407 AELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRR 486 (536)
T ss_pred hccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHH-hHHHHHHHHHHH
Q 013242 319 RMRNYMVRGI-DGLSSTEFIQVL 340 (447)
Q Consensus 319 ~i~~~~~~~~-~~~~~~~~l~~~ 340 (447)
++++|+.|++ +++..+.+...+
T Consensus 487 ~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 487 IVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 665555444433
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=314.31 Aligned_cols=265 Identities=28% Similarity=0.407 Sum_probs=228.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchh-hh-ccce-EEEEEe
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE-AR-ADIQ-EVHFLP 77 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~-~~-~~~~-~~~~~p 77 (447)
||++..|||||+|.|+-.-.+.+ ...|.+.+++...|..++-.... |-.+.|+..+++... .+ .... .-.++|
T Consensus 299 vdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~DeT-pEGrSIV~LA~~~~~~~~~~~~~~~~~fvp 374 (681)
T COG2216 299 VDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADET-PEGRSIVELAKKLGIELREDDLQSHAEFVP 374 (681)
T ss_pred ccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccCC-CCcccHHHHHHHhccCCCcccccccceeee
Confidence 69999999999999988777653 34689999999988888765543 777888876653221 11 1222 357899
Q ss_pred cCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCCh-hhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcE
Q 013242 78 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 156 (447)
Q Consensus 78 F~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~ 156 (447)
|+.+.++..+-.. ++ ..+.||+.+.+........ ..++.++...++.++.|-++|+|+.+. +
T Consensus 375 FtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~ 437 (681)
T COG2216 375 FTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------R 437 (681)
T ss_pred cceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------E
Confidence 9988776655432 23 5678999999999887443 478889999999999999999999887 9
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 157 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
++|++.+.|-++|+.+|-+.+||+.||+.+|+||||+.||..||++.|++
T Consensus 438 ~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD------------------------------ 487 (681)
T COG2216 438 ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------ 487 (681)
T ss_pred EEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch------------------------------
Confidence 99999999999999999999999999999999999999999999999997
Q ss_pred cchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 237 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
+..|+++|++|.++|+.-|.+|+.|+|+|||.||+|+|.+||||+||.+++.+||+|+.+|=+++|-..+.+.+..|+++
T Consensus 488 dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 488 DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999985
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.96 E-value=4.7e-29 Score=232.69 Aligned_cols=211 Identities=32% Similarity=0.414 Sum_probs=156.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
|++||||||||||+|++.+ . . .....++.++...+..++| |+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhh-----hhee
Confidence 6899999999999999999 1 1 5667777888777676665 9999999876542211 1111 1221
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
...++..... ++. +. |+++++....... .............|...+.++.+ +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 2222222111 121 33 8888887754311 11222223335566666666643 499999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999421 3789
Q ss_pred cc--ChhhH--HHHHHHHhhcCCEEEEEcCCCCchhHHhhcC
Q 013242 241 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 278 (447)
Q Consensus 241 ~~--~p~~K--~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~ 278 (447)
++ +|++| ..+++.|+.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999987779999999999999999997
No 35
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.67 E-value=4.6e-16 Score=129.02 Aligned_cols=123 Identities=28% Similarity=0.409 Sum_probs=109.9
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhh
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 235 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
...+.++---.+-+++.++|++|++. ++|++.|||...+....|+.+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 67888998999999999999999999 99999999999999999999999633
Q ss_pred ccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe-c--CchHHHHhhcchhccCCChhHHHHH
Q 013242 236 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A--DATDAARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 236 ~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~-~--~a~~~a~~aAD~vl~~~~~~~i~~~ 309 (447)
.+|+...|+.|..+++.|++.+..|+|+|||+||.+||+.||+||+. + +.+..+..+||+|+.+ ...++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47899999999999999999999999999999999999999999987 3 5778888999999855 4444443
No 36
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.40 E-value=5.7e-13 Score=129.19 Aligned_cols=67 Identities=22% Similarity=0.226 Sum_probs=59.6
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
+|...++.+.+. | ..|++||||.||++||+.|++||||+||.+.+|.+||+|+.+++.++|.++|+.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 577777777664 2 459999999999999999999999999999999999999999999999988863
No 37
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.40 E-value=1.3e-12 Score=123.57 Aligned_cols=153 Identities=27% Similarity=0.339 Sum_probs=106.0
Q ss_pred EeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Ccccc-c---CC-----cchh----
Q 013242 159 GLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-S---GQ-----DRDE---- 222 (447)
Q Consensus 159 G~i~l~d~-~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~-~---~~-----~~~~---- 222 (447)
|.+.-.|. +.+.+.++|++|++.|++++++||++...+..+.+.+|+....+ +...+ . +. ....
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 78999999999999999999999999999999999999864211 11111 0 00 0000
Q ss_pred ------hh----------------------hcCChh---HHHhhcc---------chhccChh--hHHHHHHHHhhc---
Q 013242 223 ------SI----------------------VALPVD---ELIEKAD---------GFAGVFPE--HKYEIVKHLQAR--- 257 (447)
Q Consensus 223 ------~~----------------------~~~~~~---~~~~~~~---------v~a~~~p~--~K~~iV~~lq~~--- 257 (447)
.. ...+.+ +.+.+.. .+.++.|. .|...++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000000 1111100 01233333 388888777654
Q ss_pred -CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 258 -NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 258 -g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
...++++||+.||++|++.|++|+||+|+.+.+|++||+|+.+++.++|.++|+
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 345999999999999999999999999999999999999999999999998886
No 38
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.38 E-value=3.3e-12 Score=123.54 Aligned_cols=154 Identities=19% Similarity=0.197 Sum_probs=108.8
Q ss_pred EeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC---------cccccCCcch-------
Q 013242 159 GLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP---------SSALSGQDRD------- 221 (447)
Q Consensus 159 G~i~l~d~-~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~---------~~~~~~~~~~------- 221 (447)
|.+.-.+. +.+.++++|+++++.|++++++||++...+..+.+++++....+. ...+.....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999751110 0000000000
Q ss_pred -------------------------h---------------------hhh-------c---CChhHHHh----hc-----
Q 013242 222 -------------------------E---------------------SIV-------A---LPVDELIE----KA----- 236 (447)
Q Consensus 222 -------------------------~---------------------~~~-------~---~~~~~~~~----~~----- 236 (447)
. ... . ....++.. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 000 0 00011100 00
Q ss_pred ------cchhccCh--hhHHHHHHHHhhc-CC---EEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChh
Q 013242 237 ------DGFAGVFP--EHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN 304 (447)
Q Consensus 237 ------~v~a~~~p--~~K~~iV~~lq~~-g~---~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~ 304 (447)
..+.++.| .+|+..++.+.+. |- .|+++||+.||++||+.|+.||||+||.+.++..||++...++.+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 00133444 3699888888774 43 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 013242 305 VIITAVLI 312 (447)
Q Consensus 305 ~i~~~i~~ 312 (447)
+|.++|+.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998874
No 39
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.37 E-value=2.4e-12 Score=125.12 Aligned_cols=146 Identities=14% Similarity=0.187 Sum_probs=102.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Cccccc---C-----------------------
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALS---G----------------------- 217 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~~---~----------------------- 217 (447)
.+.+.++++|++|++.|++++++||++...+..+.+++|++...+ +...+. +
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999864211 000000 0
Q ss_pred ---------C------cchhh-----hhc-----CChh--------------------HH---Hhh-----cc------c
Q 013242 218 ---------Q------DRDES-----IVA-----LPVD--------------------EL---IEK-----AD------G 238 (447)
Q Consensus 218 ---------~------~~~~~-----~~~-----~~~~--------------------~~---~~~-----~~------v 238 (447)
. ..... ... .... ++ +.. .. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 0 00000 000 0000 00 000 00 0
Q ss_pred hhccChh--hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcch--hccCCChhHHHHHH
Q 013242 239 FAGVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAV 310 (447)
Q Consensus 239 ~a~~~p~--~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~--vl~~~~~~~i~~~i 310 (447)
+.+++|. .|...++.|.+. | ..|++||||.||++||+.|++||||+||.+.+|++||+ |+.+++.++|..+|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1233343 588888888765 2 35999999999999999999999999999999999997 77789999999888
Q ss_pred H
Q 013242 311 L 311 (447)
Q Consensus 311 ~ 311 (447)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 6
No 40
>PRK10976 putative hydrolase; Provisional
Probab=99.36 E-value=3.8e-12 Score=123.17 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=58.3
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcc--hhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD--~vl~~~~~~~i~~~i~ 311 (447)
+|...++.+.+. | ..|++|||+.||++||+.|++||||+||.+.+|++|| .|+.+++.++|.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 488888877664 2 3599999999999999999999999999999999988 7888899999998886
No 41
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.34 E-value=3.7e-12 Score=126.13 Aligned_cols=131 Identities=19% Similarity=0.243 Sum_probs=100.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh-ccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~~p 244 (447)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|++....+...+...... . .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt----g----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT----G----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE----e----------EecCccCCc
Confidence 58999999999999999999999999988899999999985311100000000000 0 0000 1234
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+.|.++++.+.++ ...|+++|||.||++|++.||+|||| |+.+.+++.||+++..++++++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887654 35799999999999999999999999 999999999999999999999887653
No 42
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.32 E-value=1.2e-11 Score=114.89 Aligned_cols=131 Identities=16% Similarity=0.154 Sum_probs=99.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.|+.+++.| ++.++||.....+..+++++|++....+...+.+.. .+. ......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~t------------G~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RVV------------GYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---eeE------------CeeecCcc
Confidence 57999999999999975 999999999999999999999963221111111100 000 00113577
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
+|..+++.+++.+..++++|||.||++|++.||+||++ ++.+.++++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~-~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe-cCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 89999999988888899999999999999999999999 66666777776665556788888888775
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.29 E-value=9.7e-12 Score=116.56 Aligned_cols=145 Identities=21% Similarity=0.250 Sum_probs=101.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CcccccC--------Ccchhhhh----------
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSG--------QDRDESIV---------- 225 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~~~--------~~~~~~~~---------- 225 (447)
.+.+.+.++|++|++.|++++++||++...+..+++.+++....+ +...+.. ......+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999864211 0101000 00000000
Q ss_pred -----c------------CC---hhHHHhhcc-------chhccCh--hhHHHHHHHHhhc-C---CEEEEEcCCCCchh
Q 013242 226 -----A------------LP---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR-N---HICGMIGNGVNDAP 272 (447)
Q Consensus 226 -----~------------~~---~~~~~~~~~-------v~a~~~p--~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~ 272 (447)
. .. ..+.+.... .+..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 00 000111100 0112233 4788888887664 2 35999999999999
Q ss_pred HHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 273 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 273 al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
|++.|++|+||+|+.+.++..||+|+.+++.++|.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999988898887653
No 44
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.29 E-value=8.9e-12 Score=117.34 Aligned_cols=146 Identities=23% Similarity=0.279 Sum_probs=101.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Ccccc-cCC--------cchhh-----------
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SGQ--------DRDES----------- 223 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~-~~~--------~~~~~----------- 223 (447)
.+.+.+.++|+++++.|+.++++||++...+..+.+.+|+....+ +...+ ... .....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 478899999999999999999999999999999999999653211 00000 000 00000
Q ss_pred ----hh-c-------------CCh---hHHHhhcc---------chhccCh--hhHHHHHHHHhhc----CCEEEEEcCC
Q 013242 224 ----IV-A-------------LPV---DELIEKAD---------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 267 (447)
Q Consensus 224 ----~~-~-------------~~~---~~~~~~~~---------v~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg 267 (447)
.. . .+. ..+..... .+.++.| .+|...++.+.++ ...|++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0 000 00111100 1122333 3688888887664 2469999999
Q ss_pred CCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH----HHHHHH
Q 013242 268 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 311 (447)
Q Consensus 268 ~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~----i~~~i~ 311 (447)
.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++ |..+|+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999889999 665554
No 45
>PLN02887 hydrolase family protein
Probab=99.24 E-value=2.1e-11 Score=129.09 Aligned_cols=66 Identities=24% Similarity=0.321 Sum_probs=58.6
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g----~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.|.+.. ..|++||||.||++||+.|++||||+||.+.+|++||+|+.+++.+||..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4677777776542 35999999999999999999999999999999999999999999999998886
No 46
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.22 E-value=3.1e-11 Score=114.58 Aligned_cols=147 Identities=18% Similarity=0.222 Sum_probs=102.4
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Ccccc-cC-----------------------
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SG----------------------- 217 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~-~~----------------------- 217 (447)
...+.+.+.++|++|+++|++++++||+....+..+..++++....+ +...+ ..
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34588999999999999999999999999999999999999863111 00000 00
Q ss_pred -----------------Cc-chh-------------------hhhcCC------------hhH----HHhhc--------
Q 013242 218 -----------------QD-RDE-------------------SIVALP------------VDE----LIEKA-------- 236 (447)
Q Consensus 218 -----------------~~-~~~-------------------~~~~~~------------~~~----~~~~~-------- 236 (447)
.. ... ...... ... +.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 00 000 000000 000 00000
Q ss_pred --cchhccCh--hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHH
Q 013242 237 --DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 237 --~v~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
..+..++| ..|...++.+.+. ...++++||+.||.+||+.|+.|+||+|+++.++..||+++...+-++|.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 01223334 4699888888763 357999999999999999999999999999999999999999888899987
Q ss_pred HH
Q 013242 309 AV 310 (447)
Q Consensus 309 ~i 310 (447)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 65
No 47
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.21 E-value=7.9e-11 Score=114.15 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+.++ | ..|++|||+.||++|++.|++|+||+|+.+.++..||+|+.+++.++|.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 477777666543 2 35999999999999999999999999999999999999999999999998886
No 48
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.20 E-value=4.6e-11 Score=107.44 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=82.8
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc--ChhhHHHH
Q 013242 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHKYEI 250 (447)
Q Consensus 173 ~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~--~p~~K~~i 250 (447)
..|+.|++.|+++.++|+.....+..+.+.+|+.. .|... .|+....+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 46899999999999999999999999999999951 11111 23333444
Q ss_pred HHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHH
Q 013242 251 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 251 V~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i 306 (447)
++.++-....|++|||+.||++|++.|++++||+|+.+.++..|++|+..++-.++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44444444579999999999999999999999999999999999999876665543
No 49
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.15 E-value=1.8e-10 Score=107.59 Aligned_cols=122 Identities=20% Similarity=0.182 Sum_probs=91.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh-ccC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~~ 243 (447)
.++.|++.+.++.+++.|++|+++||.....+.++++++|++....+.......... . .+.. .+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt----G----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT----G----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe----c----------eeeeeecC
Confidence 679999999999999999999999999999999999999997543222211110000 0 1122 234
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCC
Q 013242 244 PEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301 (447)
Q Consensus 244 p~~K~~iV~~lq~~-g~---~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~ 301 (447)
.+.|...++.+.+. |. .+.++|||.||.|||+.||.+|++ |+.+..+..|+......
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~-n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV-NPKPKLRALADVRIWPI 202 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe-CcCHHHHHHHHHhcChh
Confidence 56788888666653 44 599999999999999999999999 66666777788776543
No 50
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.15 E-value=2e-10 Score=107.84 Aligned_cols=129 Identities=21% Similarity=0.272 Sum_probs=94.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc-cCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~-~~p 244 (447)
++.|++.+.|+.|++.|+++.++||.....+..+.+.+|+..- +......... .+.. .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~---~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDG---KLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECC---EEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998631 1100000000 0000 00011 123
Q ss_pred hhHHHHHHHHhhcC----CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 013242 245 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 245 ~~K~~iV~~lq~~g----~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~ 309 (447)
..|..+++.+.++. ..|+++||+.||++|++.||+++++ ++.+.++.+||+++.++++..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCCHHHHHhchhccCCCCHHHHHhh
Confidence 34667776655442 3599999999999999999999999 5678888999999999998887654
No 51
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.14 E-value=1.5e-10 Score=102.82 Aligned_cols=105 Identities=26% Similarity=0.354 Sum_probs=83.1
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
+|++|++.|+++.++||+....+..+.+.+|+..- |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998521 1111 234444444
Q ss_pred Hhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH-HHHHH
Q 013242 254 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 310 (447)
Q Consensus 254 lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~-i~~~i 310 (447)
+.+ ....|+|+||+.||++|++.|+++++|.++.+..+..||+++..+.-++ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 332 3457999999999999999999999999999999999999998776444 54444
No 52
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.12 E-value=1.7e-10 Score=111.10 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
+|...++.+.+. ...++++||+.||++|++.|++|+||+|+.+.++..||+++.+++.++|..+|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 588888888765 24699999999999999999999999999999999999999999999987653
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.08 E-value=6.8e-10 Score=106.97 Aligned_cols=66 Identities=18% Similarity=0.210 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhc------CCEEEEEcCCCCchhHHhhcCeeEEecCch---HHHHhh---cchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA---ADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~------g~~v~~iGDg~ND~~al~~A~vGIa~~~a~---~~a~~a---AD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+.+. ...++++||+.||.+||+.|++||||+|+. +.+++. +++|+.+++-+||.++|+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 476666666543 456999999999999999999999999987 478876 458998999999998886
No 54
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.03 E-value=6.6e-10 Score=95.77 Aligned_cols=114 Identities=24% Similarity=0.413 Sum_probs=90.7
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
.|+.|.+.||+|.++||++...+..-++.|||. .+|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~------------------------------~~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK------------------------------HLYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc------------------------------eeeec--hHhHHHHHHH
Confidence 589999999999999999999999999999995 11221 3456666655
Q ss_pred Hhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCC----hhHHHHHHHHHHHHHHH
Q 013242 254 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQR 319 (447)
Q Consensus 254 lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~----~~~i~~~i~~~r~~~~~ 319 (447)
|.++ ...|+++||..||.|+|+.+++++|+.++.+..++.||+|+...+ ..-+.++|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 5443 446999999999999999999999999999999999999998765 34445566656555443
No 55
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.02 E-value=1.3e-09 Score=106.05 Aligned_cols=66 Identities=21% Similarity=0.168 Sum_probs=54.0
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCCCchhHHhhcCeeEEecCch-H--H---HHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-D--A---ARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~-------~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~-~--~---a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.+.+ ....|+++||+.||++||+.|++||||+|+. + . .+..||+++...+-+|+.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 57777776655 3456999999999999999999999999654 2 2 3457999999999999998886
No 56
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.98 E-value=2.4e-09 Score=97.93 Aligned_cols=113 Identities=25% Similarity=0.363 Sum_probs=85.8
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHH
Q 013242 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 252 (447)
Q Consensus 173 ~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~ 252 (447)
.+|+.|++.|+++.++||+....+..+++.+|+.. +|.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCcHHHHHH
Confidence 68999999999999999999999999999999851 1111 133555554
Q ss_pred HHhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCC----hhHHHHHHHHHHHHH
Q 013242 253 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIF 317 (447)
Q Consensus 253 ~lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~----~~~i~~~i~~~r~~~ 317 (447)
.+.+ ....|+||||+.||++|++.|+++++++++.+..+..||+++..++ ...+.+.|...|.-|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 4433 2346999999999999999999999999888888999999997544 344455554444333
No 57
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.94 E-value=3.5e-09 Score=103.06 Aligned_cols=67 Identities=24% Similarity=0.312 Sum_probs=56.2
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCCCchhHHhhcCeeEEecCchHHHH----hhc-chhc--cCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~----~g-~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~----~aA-D~vl--~~~~~~~i~~~i~~ 312 (447)
.|...++.+.+ .. ..|+++||+.||++|++.|++|+||+||.+.++ .+| +.+. ..++-+|+.++|..
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 67776766654 35 889999999999999999999999999999999 666 6777 67788999888863
No 58
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.93 E-value=2.1e-09 Score=86.62 Aligned_cols=64 Identities=30% Similarity=0.383 Sum_probs=53.3
Q ss_pred CCChHHHHHHHhhCCc------hhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhcc
Q 013242 48 NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 112 (447)
Q Consensus 48 ~~~pi~~ai~~~~~~~------~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~ 112 (447)
..+|.|.|++.++... ...+..+++++.+||||.+|||+++++ .++.+++++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 3468999998876533 356788999999999999999999998 334567799999999999996
No 59
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.88 E-value=1.7e-08 Score=93.65 Aligned_cols=129 Identities=19% Similarity=0.223 Sum_probs=91.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+..-............ .. .+....|.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i~------------~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---IT------------GYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---EE------------Cccccccc
Confidence 3689999999999999 99999999999999999999998521111000000000 00 00112367
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcch-hccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~-vl~~~~~~~i~~~i~~ 312 (447)
.|...++.++..+..++|+|||.||++|.+.|++|+.++.........++. ++ +++..+...+..
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 197 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAIDK 197 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHHH
Confidence 788889988888899999999999999999999999886544434445555 44 456666655543
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.80 E-value=1.7e-08 Score=93.09 Aligned_cols=117 Identities=25% Similarity=0.327 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+++|++.+.|+.|++.|+++.++|+.....+..+.+.+|+.. .+.......... ... -..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g--~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKG--FIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCC--eEe----------cceeeEEccc
Confidence 589999999999999999999999999999999999999752 111111110000 000 0011123455
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcc
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 295 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD 295 (447)
.|..+++.+.++ ...++++||+.||++|++.||++++++......+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 677777666543 34599999999999999999999999765555666665
No 61
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.74 E-value=4.2e-08 Score=93.26 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=59.4
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcc----hhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD----~vl~~~~~~~i~~~i~~ 312 (447)
.|...++.+.++ | ..|+++||+.||.+||+.+++||+|+|+.+.++..|| +|...++-.++.++|..
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 688888888764 3 2589999999999999999999999999999999999 88888889999998863
No 62
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.73 E-value=2.1e-08 Score=89.42 Aligned_cols=122 Identities=20% Similarity=0.289 Sum_probs=82.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCC-CCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+.|++++.++.|++.|.+|+++||.....+.+++.+|||+-. .+......+.+-. +......+ .-....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk--~~gfd~~~--------ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK--YLGFDTNE--------PTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc--ccccccCC--------ccccCC
Confidence 679999999999999999999999999999999999999852 2222221111100 00000000 011234
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCCCchhHHhhcCeeEEec-C-chHHHHhhcchhc
Q 013242 246 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVA-D-ATDAARSAADIVL 298 (447)
Q Consensus 246 ~K~~iV~~lq~~--g~~v~~iGDg~ND~~al~~A~vGIa~~-~-a~~~a~~aAD~vl 298 (447)
.|+++++.+++. ...++|||||.||.+|+..|+.=|+.+ + -.+.++..|++-+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHH
Confidence 689999998874 446999999999999999987777765 2 2333444455443
No 63
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.64 E-value=2.5e-07 Score=86.71 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=88.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC-cccccCCcchhhhhcCChhHHHhhccch-hcc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGF-AGV 242 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~ 242 (447)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+. ...+.+..... ..+..+ ... ..-
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~---~~p~~~-----~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI---DWPHPC-----DGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---eCCCCC-----ccccccC
Confidence 36899999999999999999999999999999999988754332221 11222211110 000000 000 001
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHH--hhcchhccCCChhHHHHHHH
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR--SAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~--~aAD~vl~~~~~~~i~~~i~ 311 (447)
....|..+++.++.....++|+|||.||.+|++.||+.+|-+.-.+..+ ..+.+.. ++|..|...+.
T Consensus 141 cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1357999999988888889999999999999999999877542111111 1122222 55777766654
No 64
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.63 E-value=1.1e-07 Score=91.23 Aligned_cols=148 Identities=16% Similarity=0.110 Sum_probs=98.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--C--Ccccc-cCC--cchh---------------
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--Y--PSSAL-SGQ--DRDE--------------- 222 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~--~--~~~~~-~~~--~~~~--------------- 222 (447)
.+..|...++|+++++.|+.++++||+.......+.+++++..+. + +...+ .+. ..+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999999876431 1 11111 000 0000
Q ss_pred --hh---hcC--------------------C----hhH---HHhh----cc------chhccCh--hhHHHHHHHHhhc-
Q 013242 223 --SI---VAL--------------------P----VDE---LIEK----AD------GFAGVFP--EHKYEIVKHLQAR- 257 (447)
Q Consensus 223 --~~---~~~--------------------~----~~~---~~~~----~~------v~a~~~p--~~K~~iV~~lq~~- 257 (447)
.. ... . ..+ .+.. .. .+..+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 000 0 000 0000 00 0112333 4688888888664
Q ss_pred ---CCEEEEEcCCCCchhHHhh-cCeeEEecCchHHHHhhcc-------hhccCCChhHHHHHHHH
Q 013242 258 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVLI 312 (447)
Q Consensus 258 ---g~~v~~iGDg~ND~~al~~-A~vGIa~~~a~~~a~~aAD-------~vl~~~~~~~i~~~i~~ 312 (447)
...|+++||+.||++|++. ++.||+|+|+.+.++..++ ++....+-+|+.+++..
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3469999999999999998 6799999999999987654 66666778888887753
No 65
>PLN02954 phosphoserine phosphatase
Probab=98.55 E-value=4.5e-07 Score=85.30 Aligned_cols=132 Identities=21% Similarity=0.286 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+........+ ........ ......+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~~--------~~~~~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFDE--------NEPTSRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECccC--------CCcccCC
Confidence 378999999999999999999999999999999999999963 221110010000 00000000 0000112
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCCCchhHHhh--cCeeEEecCc--hHHHHhhcchhccCCChhHHHHH
Q 013242 245 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 245 ~~K~~iV~~lq~~--g~~v~~iGDg~ND~~al~~--A~vGIa~~~a--~~~a~~aAD~vl~~~~~~~i~~~ 309 (447)
..|.+.++.+..+ ...++|+||+.||+.|.+. ++++++.+.. .+.....+|+++.+ +..+...
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 3477777776654 3579999999999999888 4555655532 23345568988854 6665543
No 66
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.54 E-value=1.2e-07 Score=86.71 Aligned_cols=92 Identities=24% Similarity=0.289 Sum_probs=67.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh---
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE--- 245 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~--- 245 (447)
+++.+.|+.++++|++++|+||+....+..+++.+|++........+.... ......++++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999974211111111000 00112333433
Q ss_pred hHHHHHHHH------hhcCCEEEEEcCCCCchhHHh
Q 013242 246 HKYEIVKHL------QARNHICGMIGNGVNDAPALK 275 (447)
Q Consensus 246 ~K~~iV~~l------q~~g~~v~~iGDg~ND~~al~ 275 (447)
.|...++.+ +.....++++|||.||+||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999986
No 67
>PLN02382 probable sucrose-phosphatase
Probab=98.51 E-value=3.9e-07 Score=93.62 Aligned_cols=146 Identities=19% Similarity=0.128 Sum_probs=93.3
Q ss_pred CCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----Ccc-cccCCcc----------------h---
Q 013242 167 PIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----PSS-ALSGQDR----------------D--- 221 (447)
Q Consensus 167 ~r~~~~~~I-~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~----~~~-~~~~~~~----------------~--- 221 (447)
+.+...+++ +++++.|+.++++||+++.....+.+.+++..+.+ +.. +..+... .
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333345555 88999999999999999999999999998865421 000 0000000 0
Q ss_pred hhhhcC-----------------------ChhH----HHhh-------cc------chhccChh--hHHHHHHHHhhc--
Q 013242 222 ESIVAL-----------------------PVDE----LIEK-------AD------GFAGVFPE--HKYEIVKHLQAR-- 257 (447)
Q Consensus 222 ~~~~~~-----------------------~~~~----~~~~-------~~------v~a~~~p~--~K~~iV~~lq~~-- 257 (447)
+..... ...+ +.+. +. .+.++.|. .|...++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000000 0001 1000 00 12234443 599988888765
Q ss_pred --C---CEEEEEcCCCCchhHHhhcC-eeEEecCchHHHHhhc--------chhc-cCCChhHHHHHHHH
Q 013242 258 --N---HICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVL-TEPGLNVIITAVLI 312 (447)
Q Consensus 258 --g---~~v~~iGDg~ND~~al~~A~-vGIa~~~a~~~a~~aA--------D~vl-~~~~~~~i~~~i~~ 312 (447)
| ..|+++||+.||++||+.++ .||+|+|+.+.+++.+ ++++ .+++-+||.++|..
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 2 36999999999999999999 7999999999999754 3332 35678888888864
No 68
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.49 E-value=7.7e-07 Score=83.65 Aligned_cols=135 Identities=14% Similarity=0.046 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--cccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
+++|++.+.|+.|++.|+++.++||.....+..+.+.+ +....+. ...+.+..... ..+..... . +....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~---~kp~p~~~-~---~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI---TWPHPCDE-H---CQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE---eccCCccc-c---ccccC
Confidence 58999999999999999999999999999999999988 6432111 11111111100 00000000 0 00000
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHH--HhhcchhccCCChhHHHHHH
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA--RSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a--~~aAD~vl~~~~~~~i~~~i 310 (447)
...|..+++.++.....|+|||||.||++|.+.||+.++-+.-.+.+ +..+.+.+ .+|..|...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 13478899988887778999999999999999999977732111111 12233333 4466666554
No 69
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.43 E-value=6.1e-07 Score=82.95 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=76.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch-hccC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 243 (447)
.++++++.+.|+.+++.|++++++||.....+..+++.+|+..- +........+ ...... +. -.+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g~----------~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTGN----------IDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeCC----------ccCCCCC
Confidence 35889999999999999999999999999999999999999531 1111110000 000000 00 1234
Q ss_pred hhhHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 244 PEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 244 p~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
++.|...++.+.++ + ..++++||+.+|.+|++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 56788877766543 3 36899999999999999999999985
No 70
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.42 E-value=4.6e-07 Score=81.75 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=69.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
++|++.+.++.+++.|++++++||.....+..+++.+|+..-..+........ .+... . ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~~~g~----~----~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG---LLTGP----I----EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---EEeCc----c----CCcccCCcch
Confidence 68999999999999999999999999999999999999863111111110000 00000 0 0001244578
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCCCchhHHhhc
Q 013242 247 KYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 277 (447)
Q Consensus 247 K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A 277 (447)
|..+++.+.++ ...++++|||.||++|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 34599999999999999875
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.39 E-value=1.1e-06 Score=80.01 Aligned_cols=111 Identities=17% Similarity=0.126 Sum_probs=75.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcc---hhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDR---DESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~a~ 241 (447)
-++.+++.+.++.|++.|+++.++|+........+.+..|+.... . .++..... +...... ..++..+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~~~~~g~~~~~-----~~~~~~~~~ 143 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-I-EIYSNPASFDNDGRHIVW-----PHHCHGCCS 143 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-e-EEeccCceECCCCcEEEe-----cCCCCccCc
Confidence 368899999999999999999999999999999999999985321 0 11111000 0000000 001111111
Q ss_pred -cChhhHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 242 -VFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 242 -~~p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
.....|..+++.++.+ ...++++|||.||+.|.+.||+-.|
T Consensus 144 ~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1223589999999887 8899999999999999999987544
No 72
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.37 E-value=2.8e-06 Score=79.76 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC-
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF- 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~- 243 (447)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ..++.+.. +....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC-------------------CCCCCc
Confidence 358899999999999999999999999999999999999985321 11111100 11112
Q ss_pred -hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecC----chHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 244 -PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 244 -p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~----a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
|+--..+++.++.....++++||+.||+.+.+.||+ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 222244555565556789999999999999999999 555532 2344455688887 6688888777543
No 73
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.33 E-value=1.7e-06 Score=81.74 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=39.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
.+..-+.+.++|++|++.|++++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999853
No 74
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.33 E-value=3.5e-06 Score=79.30 Aligned_cols=126 Identities=19% Similarity=0.221 Sum_probs=91.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
...+-|++++++..|+++|++..++|++....+..+.+.+|+..-. ..+.|.+. .....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~----------------~~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDD----------------VPPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCC----------------CCCCCcC
Confidence 4468899999999999999999999999999999999999996321 01111000 0012224
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcC---eeEEecC--chHHHHhhcchhccCCChhHHHHHH
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~---vGIa~~~--a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
|.....+++.+......++||||..+|+.|-+.|+ +|+..|. ........+|+++.+ +..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55555666666655457999999999999999999 6677763 455666679999844 77766554
No 75
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.32 E-value=2.7e-06 Score=82.45 Aligned_cols=140 Identities=11% Similarity=0.134 Sum_probs=86.6
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCccccc---CC----cch------------hhh-
Q 013242 166 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS---GQ----DRD------------ESI- 224 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~-~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~---~~----~~~------------~~~- 224 (447)
.+.++++++|++|++ .|+.++++||+....+..+.+.+++.--..+...+. +. ... +..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 799999999999999988887766420000000000 00 000 000
Q ss_pred ------------------hcCC-hh----HH----Hhhcc--------chhccCh--hhHHHHHHHHhhc----CCEEEE
Q 013242 225 ------------------VALP-VD----EL----IEKAD--------GFAGVFP--EHKYEIVKHLQAR----NHICGM 263 (447)
Q Consensus 225 ------------------~~~~-~~----~~----~~~~~--------v~a~~~p--~~K~~iV~~lq~~----g~~v~~ 263 (447)
...+ .. .+ ..... .+.++.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 00 01 00000 1223334 3688888876654 357999
Q ss_pred EcCCCCchhHHhhc----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 264 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 264 iGDg~ND~~al~~A----~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+||+.||.+||+.+ ++||+||++. ..|++.+. +...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHHH
Confidence 99999999999999 9999999875 44777775 4666655543
No 76
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.27 E-value=5.3e-06 Score=76.95 Aligned_cols=124 Identities=16% Similarity=0.194 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++||.....+....+.+|+..-. . .++...+. ....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999999999999999985210 0 01100000 01111232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-e--c--CchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--A--DATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~--~--~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.++-....++||||+.+|+.+-+.+|+... + | +..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2344555555556779999999999999999998633 2 3 23344566789887 4466665544
No 77
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.26 E-value=4.1e-06 Score=78.62 Aligned_cols=40 Identities=20% Similarity=0.205 Sum_probs=36.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+.+.++++|+.|++.|++++++||+....+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3344899999999999999999999999999999999986
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.23 E-value=5e-06 Score=70.48 Aligned_cols=118 Identities=15% Similarity=0.070 Sum_probs=74.0
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 162 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 162 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
....++.+++.+.|++|++.|++++++||.....+....+.+|+... ...++............ ..........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKE-GLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccc-cccccccccccCC
Confidence 34458899999999999999999999999999999999999988411 01111100000000000 0000000011223
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhc-CeeEE
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA-DIGIA 282 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A-~vGIa 282 (447)
-.|+.+..+.+.+......++++||+.||+.|++.+ .-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 345555566666665567899999999999999994 44443
No 79
>PRK11590 hypothetical protein; Provisional
Probab=98.14 E-value=1.6e-05 Score=74.29 Aligned_cols=103 Identities=13% Similarity=0.024 Sum_probs=74.4
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC--CCCCCcccccCCcchhhhhcCChhHHHhhccc-hhc
Q 013242 166 PPIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADG-FAG 241 (447)
Q Consensus 166 ~~r~~~~~~I-~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~a~ 241 (447)
.+.|++.++| +.+++.|++++++|+.....+..+++.+|+. .+.+ +...+..+.. .+ =..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~tg----------~~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRYGG----------WVLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEEcc----------EECCcc
Confidence 3589999999 5788899999999999999999999999962 1211 1111100000 00 123
Q ss_pred cChhhHHHHHHHH-hhcCCEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 242 VFPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 242 ~~p~~K~~iV~~l-q~~g~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
|..+.|..-++.+ ......+.+-||+.||.|||+.|+.+++++
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 5668888877654 444556778999999999999999999994
No 80
>PRK08238 hypothetical protein; Validated
Probab=98.11 E-value=1.6e-05 Score=83.14 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=74.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
|++|++.+.|+++++.|++++++|+-+...+..+++.+|+.+.. +.+ +. ...+.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V-----igs-d~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV-----FAS-DG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE-----EeC-CC------------------ccccCCc
Confidence 47899999999999999999999999999999999999973211 111 00 1234566
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA 290 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a 290 (447)
.|.+.+...... +.+.++||+.||.+|++.|+-.++++......
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 676655432222 22678999999999999999999997554433
No 81
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.10 E-value=1.6e-05 Score=74.18 Aligned_cols=123 Identities=17% Similarity=0.178 Sum_probs=82.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++...+.. ...-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 7799999999999999999999999999999999999985311 1111110000 01122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee---EEecC-chH-HHHhhcchhccCCChhHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG---IAVAD-ATD-AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG---Ia~~~-a~~-~a~~aAD~vl~~~~~~~i~~~i 310 (447)
-..+++.++.....+++|||+.+|+.+-+.||+- +..+. ..+ .....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 3345555554556799999999999999999985 33332 222 3344588877 4577766544
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.06 E-value=2.3e-05 Score=76.29 Aligned_cols=126 Identities=13% Similarity=0.160 Sum_probs=82.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.++.|++.++|+.|++.|+++.++||.....+..+...+|+.... ..++.+.... ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 368899999999999999999999999999888888888884210 0011110000 001111
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC----chHHHHhhcchhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~----a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+--..+++.+.-....|+||||+.||+.|.+.||+. +++.. ..+.....+|+++ +++..+..++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 112234444444456799999999999999999973 44432 2333445788888 45777665433
No 83
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.04 E-value=2.3e-05 Score=72.81 Aligned_cols=122 Identities=15% Similarity=0.158 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999999999999999985211 1111110000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-e--cCc--hHHHHhhcchhccCCChhHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--ADA--TDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~--~~a--~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
-=..+.+.++.....+++|||+.+|+.+.+.||+... + |.. .......+|+++. ++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 2234444554445679999999999999999998754 3 211 2223346888774 4655543
No 84
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.02 E-value=3.4e-05 Score=74.68 Aligned_cols=43 Identities=7% Similarity=-0.017 Sum_probs=39.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
+...+.+.++|++|++.||.|+++||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3466779999999999999999999999999999999999864
No 85
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.97 E-value=4.1e-05 Score=71.92 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=78.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
-++.|++.++|+.|++.|+++.++|+........+.+.+|+..-. ..++.+... ....-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999985321 111111000 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe-cCc---hHHHHhhcchhccCCChhHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADA---TDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~-~~a---~~~a~~aAD~vl~~~~~~~i~ 307 (447)
+-=..+.+.++-....|++|||+.||+.+-+.||+.... ... .+.-...+|+++.+ +..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 211223333333345699999999999999999987544 221 11223357777643 55543
No 86
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.95 E-value=5.6e-05 Score=70.79 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=80.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
.++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.. ..++...+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 3689999999999999999999999999999999999999852 111 1111111100 01112
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeE--EecC---chH-HHHhhcchhccCCChhHHHHH
Q 013242 244 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI--AVAD---ATD-AARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 244 p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGI--a~~~---a~~-~a~~aAD~vl~~~~~~~i~~~ 309 (447)
|+-=..+++.+.-. ...++||||+.+|+.+-+.||+.. ++.. ... .....+|+++ +++..+..+
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 22222333444433 357999999999999999999986 3322 222 2234577777 346655443
No 87
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.95 E-value=4.6e-05 Score=71.20 Aligned_cols=106 Identities=11% Similarity=0.052 Sum_probs=73.3
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~-~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.+.|++.++|+ .+++.|++++++|+-....+.++++..++.... .++ +...+.. .. ..+ .=..|..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i-~t~le~~-~g---g~~-----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI-ASQIERG-NG---GWV-----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE-EEEeEEe-CC---ceE-----cCccCCC
Confidence 46899999996 788899999999999999999999986652210 000 1111000 00 000 0123566
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 245 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 245 ~~K~~iV~~l-q~~g~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
++|..-++.. ......+.+-||+.||.|||+.||.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7888877644 333445678999999999999999999994
No 88
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.89 E-value=6.7e-05 Score=70.98 Aligned_cols=125 Identities=14% Similarity=0.126 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 57899999999999999999999999998888888888885311 011111100 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-Ee--cC--c-hHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AV--AD--A-TDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~--~~--a-~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.++-....++||||+.||+.|-+.||+.. ++ |. . .......+|+++. ++..+.+.+.
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~ 225 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPAT 225 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhc
Confidence 334556666666678999999999999999999873 33 21 1 1223446888884 4666655443
No 89
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.88 E-value=0.00016 Score=70.13 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-|++.++|+.|++.|+++.++||.....+..+.+.+|+..-.. ..++.+.+.. ...-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 467999999999999999999999999998888888877642111 1111111100 1111222
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-=..+++.+.-. ...++||||+.+|+.+-+.||+-
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 223344444433 35799999999999999999973
No 90
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.87 E-value=4.3e-05 Score=81.67 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+-+.+.++|++|+++|+.++++||+....+..+.+++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4567899999999999999999999999999999999974
No 91
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.84 E-value=0.00014 Score=69.76 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++||.....+..+.+.+|+..-.. ..++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 367999999999999999999999999999999999999853211 1111111100 1111232
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-=..+++.+.-. ...++||||+.+|+.+-+.||+-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444432 45699999999999999999975
No 92
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.80 E-value=6.6e-05 Score=69.49 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 204 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lG 204 (447)
++.+.+.++|++|++.|++++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999988754
No 93
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.76 E-value=0.00026 Score=68.49 Aligned_cols=134 Identities=10% Similarity=0.046 Sum_probs=82.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----cccccCCcchhhhhcCChhHHHhhccchh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----SSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
-+++|++.+.++.|++.|+++.++||.....+..+.+++|+...... ...+.... .....+ +.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG---vltG~~-~P--------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG---VLKGFK-GP--------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC---eEeCCC-CC---------
Confidence 46899999999999999999999999999999999999998532110 00010000 000000 00
Q ss_pred ccChhhHHHHHH-----HHh--hcCCEEEEEcCCCCchhHHhhc---CeeEEec--Cc-----hHHHHhhcchhccCCCh
Q 013242 241 GVFPEHKYEIVK-----HLQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGL 303 (447)
Q Consensus 241 ~~~p~~K~~iV~-----~lq--~~g~~v~~iGDg~ND~~al~~A---~vGIa~~--~a-----~~~a~~aAD~vl~~~~~ 303 (447)
-+....|.+.+. .++ .....|+++|||.||++|..-. .--+.+| |. -+.-.++=|+|+.++.-
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 001123444332 233 2345799999999999996554 2234444 32 23345788999998765
Q ss_pred hHHHHHHH
Q 013242 304 NVIITAVL 311 (447)
Q Consensus 304 ~~i~~~i~ 311 (447)
-.++..|.
T Consensus 267 ~~v~~~il 274 (277)
T TIGR01544 267 LEVANSIL 274 (277)
T ss_pred chHHHHHH
Confidence 55554443
No 94
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.76 E-value=0.00011 Score=81.20 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=47.7
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCCCchhHHhhc---CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~--g~~v~~iGDg~ND~~al~~A---~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
-+|...++.+.+. ...++++||+.||.+||+.+ +++|+||++ +.+|++++.++ ..+...+.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 3699999888764 34799999999999999996 688899885 46788999754 45555554
No 95
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.73 E-value=0.00022 Score=74.59 Aligned_cols=176 Identities=20% Similarity=0.223 Sum_probs=119.5
Q ss_pred CCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-----------Ccccc------
Q 013242 153 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-----------PSSAL------ 215 (447)
Q Consensus 153 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~-----------~~~~~------ 215 (447)
.+-.|+|++.+.-+++++....|+.|-++-|+.+..|-.+....+-+|+++||..... |....
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 4468999999999999999999999999999999999999999999999999964211 10000
Q ss_pred -cC-------------------Ccchh------hhhcCC------------------------------hhHHHhhccch
Q 013242 216 -SG-------------------QDRDE------SIVALP------------------------------VDELIEKADGF 239 (447)
Q Consensus 216 -~~-------------------~~~~~------~~~~~~------------------------------~~~~~~~~~v~ 239 (447)
.+ ...+. .+.-.+ .|.+-.-...|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 00 00000 000000 00010111248
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCc--hhHHhhcCeeEEecCc-------------hHH-HHhhcc--------
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVND--APALKKADIGIAVADA-------------TDA-ARSAAD-------- 295 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND--~~al~~A~vGIa~~~a-------------~~~-a~~aAD-------- 295 (447)
..++|+.--+.|+.+|+.|.+|+++|...|- ...+-+||++||+..- +.. ...+.|
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 8999999999999999999999999998885 3456889999998521 111 011222
Q ss_pred ---------hhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013242 296 ---------IVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 328 (447)
Q Consensus 296 ---------~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~ 328 (447)
+-+....+-.+.++|.-+|-...-+|..++|.+
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 222222344566778888888888888888887
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.70 E-value=0.00025 Score=68.99 Aligned_cols=121 Identities=12% Similarity=0.104 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... . .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCC------------------CC--CCHH
Confidence 57899999999999999999999999999999999999985321 0 1111100 00 0111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-e--cC-chH-HHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--AD-ATD-AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~--~~-a~~-~a~~aAD~vl~~~~~~~i~~~i 310 (447)
-=..+++.++-....++||||+.+|+.+-+.||+-.. + +. ..+ .....+|+++ +++..|...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1122233333344579999999999999999998643 2 21 222 2344689888 4477776654
No 97
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.67 E-value=0.00026 Score=68.38 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++|+.....+..+.+.+|+..- -..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 4689999999999999999999999999999999999998531 11111111110 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-Eec-CchHHHHhhcchhccCCChhHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVA-DATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~~-~a~~~a~~aAD~vl~~~~~~~i 306 (447)
-=..+++.++-....++||||..+|+.+-+.||+-. ++. .........+|+++.+ ++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHH
Confidence 223445555555667999999999999999999853 443 2222223357877644 5544
No 98
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.63 E-value=0.00036 Score=66.87 Aligned_cols=117 Identities=12% Similarity=0.150 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 47899999999999999999999999999999999999985211 1111111110 1112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-ec--CchH-HHHhhcchhccCC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA--DATD-AARSAADIVLTEP 301 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~~--~a~~-~a~~aAD~vl~~~ 301 (447)
--..+++.++.....++||||+.+|+.+-+.||+-.. +. ...+ .....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 3344555555556679999999999999999998633 32 2222 2234688888553
No 99
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.59 E-value=0.00025 Score=74.28 Aligned_cols=124 Identities=11% Similarity=0.066 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.|+.|++.|+++.++|+.....+..+.+.+|+..-. ..++.+++.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999999985311 1111111100 001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEec--CchHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~--~a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
--..+++.+ ....+++|||+.+|+.+-+.||+- |++. ...+.....+|+++ +++..+...+...
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 112222222 235799999999999999999984 4443 22222234578887 4577777766543
No 100
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.55 E-value=0.00015 Score=69.61 Aligned_cols=67 Identities=19% Similarity=0.206 Sum_probs=47.8
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHH-----HHhhc---c-hhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSAA---D-IVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~-----a~~aA---D-~vl~~~~~~~i~~~i~ 311 (447)
..|...|+.|+.+ + ..|+++||+.||.+||..+..||.++|+.+. ..... . ++...+.-.||.+++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4699999999876 2 3588899999999999999999999998888 22222 1 3455566777777765
No 101
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.48 E-value=0.00024 Score=65.49 Aligned_cols=93 Identities=19% Similarity=0.152 Sum_probs=65.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
+++.+.+.++|+.|++.|+++.++||.....+..+.+.+|+..-. ..++.+. .+...-.|
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~p 164 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPNP 164 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcCH
Confidence 446677799999999999999999999999999999999985211 1111110 01112234
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhc
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 277 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A 277 (447)
+--..+++.++.....|+||||+.+|+.+-+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 444555666666667899999999999876654
No 102
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.43 E-value=0.00069 Score=66.67 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=75.8
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 162 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 162 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
...+++.+++.++|+.|++.|++++++||+....+..+.+.+|+....+. .+.+.+.. ..++.. ..-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~~--------~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPPD--------MHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcch--------hhhccc-CCCCC
Confidence 35678999999999999999999999999999999999999988531110 11111100 000000 00123
Q ss_pred cChhhHHHHHHHHhh-cCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 242 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~-~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
-.|+-+..+++.+.. ....++||||..+|+.+-+.||+..
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 345566677766544 3478999999999999999999873
No 103
>PRK11587 putative phosphatase; Provisional
Probab=97.43 E-value=0.00068 Score=63.52 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|+++|+++.++|+.....+....+..|+.. . ..++.++.. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 478999999999999999999999988777766667777731 1 111111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCch-HHHHhhcchhccC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 300 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a~-~~a~~aAD~vl~~ 300 (447)
--..+.+.+.-....++||||+.+|+.+-+.||+. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 23344455555567899999999999999999985 5665332 2223356776643
No 104
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.43 E-value=0.00048 Score=65.43 Aligned_cols=89 Identities=18% Similarity=0.202 Sum_probs=62.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~----~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
.|.+++++.|+.+++.|+++.++||+. ..++..+.+.+|+....+-..++.++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 477889999999999999999999974 568888998899942211111221110
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
....+|...+ ++.+ .++|+||..+|+.+-+.||+-
T Consensus 172 ~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 172 PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0113344433 3333 489999999999999999986
No 105
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.37 E-value=0.00064 Score=64.13 Aligned_cols=101 Identities=11% Similarity=0.029 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+..- . ..++.+.+.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeCC-----------------CCCCCHH
Confidence 5789999999999999999999999988888888888887421 0 0111110000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee--EEecC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 285 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG--Ia~~~ 285 (447)
-=..+.+.+.-....++||||+.+|+.+-+.||+. +++.+
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 12233344444456799999999999999999996 44554
No 106
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.36 E-value=0.00041 Score=65.93 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd----~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
.+.+++.+.|+.+++.|+++.++|+. ...++..+.+.+|+... . ..++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------C
Confidence 35556999999999999999999998 66789999999999531 1 1111111100 0
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-.| +|. ..+++.+ .++|+||..||+.+-+.|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 011 232 2344444 489999999999999999875
No 107
>PTZ00174 phosphomannomutase; Provisional
Probab=97.36 E-value=0.0002 Score=68.58 Aligned_cols=60 Identities=25% Similarity=0.358 Sum_probs=50.5
Q ss_pred hhccCh--hhHHHHHHHHhhcCCEEEEEcC----CCCchhHHhhc-CeeEEecCchHHHHhhcchhc
Q 013242 239 FAGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 298 (447)
Q Consensus 239 ~a~~~p--~~K~~iV~~lq~~g~~v~~iGD----g~ND~~al~~A-~vGIa~~~a~~~a~~aAD~vl 298 (447)
+.++.| -+|+..++.|.++...|++||| |.||++||+.| -.|++++|+.+.++..+.+++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 345555 4699999999888889999999 99999999976 577888899999998887665
No 108
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.33 E-value=0.0003 Score=62.35 Aligned_cols=97 Identities=19% Similarity=0.233 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|++++++|+..........+++|+.. +...++...+.. ...-.|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchhh-----------------hhhhHHH
Confidence 578999999999999999999999999999999999999851 111111111000 1111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
-=..+++.++-....+++|||+..|+.+-+.||+--
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 224455566556678999999999999999998753
No 109
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.33 E-value=0.00085 Score=61.70 Aligned_cols=98 Identities=16% Similarity=0.166 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|++|++.|+++.++|+.+......+.+.+|+... . ..++...+. ....-.|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~-----------------~~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-F-DAVLSADAV-----------------RAYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-h-heeEehhhc-----------------CCCCCCHH
Confidence 4789999999999999999999999999888889999998421 0 011111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
-=..+.+.+.-....+++|||+.+|+.+-+.||+-..
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 1233445555455679999999999999999998643
No 110
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.30 E-value=0.0017 Score=65.79 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++|+.....+..+.+.+||..-. ..++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 57799999999999999999999999999999999999985210 1111111000 0111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-EecCchHHH-HhhcchhccCCChhHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADATDAA-RSAADIVLTEPGLNVI 306 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~~~a~~~a-~~aAD~vl~~~~~~~i 306 (447)
-=...++.++-....|+||||..+|+.+-+.|++-. ++..+.+.. ...||+++.+ +..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC--HHHH
Confidence 334455666656778999999999999999999863 333322222 2347877743 5554
No 111
>PRK06769 hypothetical protein; Validated
Probab=97.28 E-value=0.0007 Score=61.20 Aligned_cols=98 Identities=10% Similarity=0.044 Sum_probs=60.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH--------HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 238 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~--------~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 238 (447)
+.|++.++++.|++.|+++.++|+.... ......+.+|+..- +......+++. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 12333445555310 00000000000 0
Q ss_pred hhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 239 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 239 ~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
...-.|+-=..+++.+......++||||..+|+.+-+.|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333344555555555679999999999999999998644
No 112
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.27 E-value=0.0018 Score=58.81 Aligned_cols=126 Identities=21% Similarity=0.142 Sum_probs=71.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCcccccCCcc-hhhhhcCChh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDR-DESIVALPVD 230 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lGi~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (447)
+.|++.++++.|++.|+++.++|+... .....+.+.+|+. +. .++..... .+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---f~-~i~~~~~~~~~~------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR---LD-GIYYCPHHPEDG------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc---cc-eEEECCCCCCCC-------
Confidence 679999999999999999999998762 1112233444541 00 01100000 000
Q ss_pred HHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-EecCc--hH-HHHhhc--chhccCCChh
Q 013242 231 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADA--TD-AARSAA--DIVLTEPGLN 304 (447)
Q Consensus 231 ~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~~~a--~~-~a~~aA--D~vl~~~~~~ 304 (447)
.....-.|+--..+++.+.-....++||||+.+|+.+-+.||+.. .+..+ .. .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001112233334455555555678999999999999999999752 23222 11 112234 7776 4466
Q ss_pred HHHHHHH
Q 013242 305 VIITAVL 311 (447)
Q Consensus 305 ~i~~~i~ 311 (447)
.+...+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6665543
No 113
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.26 E-value=0.0009 Score=62.51 Aligned_cols=100 Identities=16% Similarity=0.224 Sum_probs=67.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|++++++|+..........+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEEG-----------------VEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccCC-----------------CCCCCHH
Confidence 47899999999999999999999999988888888888884211 0111110000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee-EEec
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 284 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~ 284 (447)
-=..+.+.+......+++|||.. +|+.+-+.||+- |.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22334444544456799999998 999999999985 4454
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.22 E-value=0.001 Score=56.92 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhcc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 237 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~--------~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (447)
++.|++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999998 77788888888874110 00000
Q ss_pred chhccChhhHHHHHHHHh-hcCCEEEEEcC-CCCchhHHhhcCee
Q 013242 238 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIG 280 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq-~~g~~v~~iGD-g~ND~~al~~A~vG 280 (447)
.+..-.|+-=..+++.++ -....++|||| ..+|+.+-+.+|+-
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 001111222234455552 45567999999 69999999999874
No 115
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.18 E-value=0.003 Score=58.25 Aligned_cols=146 Identities=20% Similarity=0.283 Sum_probs=93.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc-------ccccCCcchhhh------hcCChhHH
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-------SALSGQDRDESI------VALPVDEL 232 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~-------~~~~~~~~~~~~------~~~~~~~~ 232 (447)
.+-|++.++++.|+..= ..+++|-...+-+..+|..+|++...... ..+...+..+.+ ...+-+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 36699999999998764 45566666778889999999996422111 111111111111 11122233
Q ss_pred Hhhc-cchhccChhh---------------HHHHHHHHhhc---CCEEEEEcCCCCchhHHhhcC-ee-EEec-CchHHH
Q 013242 233 IEKA-DGFAGVFPEH---------------KYEIVKHLQAR---NHICGMIGNGVNDAPALKKAD-IG-IAVA-DATDAA 290 (447)
Q Consensus 233 ~~~~-~v~a~~~p~~---------------K~~iV~~lq~~---g~~v~~iGDg~ND~~al~~A~-vG-Ia~~-~a~~~a 290 (447)
.++. .+|.+..|.. |+.+++.+... ....+++||++.|+.||+.+. -| +|++ |+.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 3332 2577777755 44444444432 223688999999999999873 33 7776 888888
Q ss_pred HhhcchhccCCChhHHHHHHHH
Q 013242 291 RSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 291 ~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
...||+.+.+++..++...|..
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8889999999999998888875
No 116
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.18 E-value=0.0016 Score=63.83 Aligned_cols=117 Identities=18% Similarity=0.133 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc-ccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.+.++.|++.|+++.++|+........+.+.++... .... ..+.+.+. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 578999999999999999999999998888877766653211 0000 01111000 0111222
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe-cCc--hHHHHhhcchhccC
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADA--TDAARSAADIVLTE 300 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~-~~a--~~~a~~aAD~vl~~ 300 (447)
+-=..+++.+.-....++||||+.+|+.+-+.||+.... ..+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 223445555555556799999999999999999987443 222 11112357887744
No 117
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.15 E-value=0.00092 Score=59.66 Aligned_cols=106 Identities=12% Similarity=0.006 Sum_probs=74.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC----CCCCCCCc--ccccCCcchhhhhcCChhHHHhhccch
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG----MGTNMYPS--SALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lG----i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
.++|+-++.++.+++.+++++++|+.-.....++-++++ +....+.+ ..+...... .++-. .
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h---------~i~~~---~ 140 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH---------SIKYT---D 140 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce---------eeecC---C
Confidence 488999999999999999999999999888888888776 33211110 000000000 00000 0
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
....-.+|...|+.+.+....+.|+|||+.|++|-+.+|+=.|-
T Consensus 141 ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 141 DSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 12234579999999999999999999999999998888876653
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.12 E-value=0.0014 Score=61.18 Aligned_cols=121 Identities=11% Similarity=0.084 Sum_probs=75.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++. +++.++|+.....+..+.+.+|+..-. ..++...+. ....-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-----------------CCCCCCHH
Confidence 5789999999999999 999999999999999999999985311 011110000 00111121
Q ss_pred hHHHHHHHH-hhcCCEEEEEcCCC-CchhHHhhcCee-EEec--CchHHHHhhcchhccCCChhHHHH
Q 013242 246 HKYEIVKHL-QARNHICGMIGNGV-NDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV~~l-q~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~--~a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
-=..+++.+ .-....+++|||+. +|+.+-+.+|+- |.+. ..++.....+|+++. ++..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 113344445 44456799999998 899999999974 3332 222122234566653 3555543
No 119
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.12 E-value=0.0044 Score=55.09 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=65.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCcccccCCcchhhhhcCChhHHHhh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALSGQDRDESIVALPVDELIEK 235 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~---~ia~~l---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
+|.+.+++.+++++++++|++++++||+....+. .....+ | ++. -+....+|.... ... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~-~~~---------~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFA-ALH---------R 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchh-hhh---------c
Confidence 4678999999999999999999999999988874 555552 3 321 001111111000 000 0
Q ss_pred ccchhccCh-hhHHHHHHHHhh-----cCCEEEEEcCCCCchhHHhhcCee
Q 013242 236 ADGFAGVFP-EHKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 236 ~~v~a~~~p-~~K~~iV~~lq~-----~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
.+. ...| +.|...++.+.+ ....++.+|++.+|+.+.+++++.
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 1223 347777777766 345677899999999999998874
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.06 E-value=0.0011 Score=59.94 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|+++|+++.++|+... +....+.+|+.... ..++.+.+. ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997543 45667778874211 011111000 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-=..+++.+.-....++||||+.+|+.+-+.||+-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 21233444443345699999999999999999985
No 121
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.06 E-value=0.0026 Score=57.24 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+..... ..+..++|+... . ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f-~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-F-DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-C-CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988877 555555787421 0 111111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
--..+.+.+......+++|||...|+.+-+.+|+-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 23344555555567899999999999999999873
No 122
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.02 E-value=0.0013 Score=59.51 Aligned_cols=92 Identities=12% Similarity=0.150 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++|+. ..+..+.+.+|+..-. ..++.+.. .....|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 58899999999999999999999987 5577778888874210 01110000 0011121
Q ss_pred h--HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 246 H--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~--K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
. =..+.+.+......+++|||+.+|+.+-+.||+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 1 1223333333345699999999999999999885
No 123
>PLN02580 trehalose-phosphatase
Probab=96.97 E-value=0.0027 Score=64.24 Aligned_cols=68 Identities=24% Similarity=0.222 Sum_probs=49.3
Q ss_pred hccChh---hHHHHHHHHhhc-C---C---EEEEEcCCCCchhHHhh-----cCeeEEecCchHHHHhhcchhccCCChh
Q 013242 240 AGVFPE---HKYEIVKHLQAR-N---H---ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLN 304 (447)
Q Consensus 240 a~~~p~---~K~~iV~~lq~~-g---~---~v~~iGDg~ND~~al~~-----A~vGIa~~~a~~~a~~aAD~vl~~~~~~ 304 (447)
.++.|. +|...|+.+.+. + . .++++||+.||..||+. +++||+|+++... ..|++.+.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HH
Confidence 345563 899988887664 2 1 25899999999999996 6999999986543 357888844 66
Q ss_pred HHHHHHH
Q 013242 305 VIITAVL 311 (447)
Q Consensus 305 ~i~~~i~ 311 (447)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 6665554
No 124
>PRK09449 dUMP phosphatase; Provisional
Probab=96.84 E-value=0.0043 Score=58.12 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|+ .|+++.++|+.....+....+.+|+..-. ..++.+.+. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-----------------CCCCCCHH
Confidence 36799999999999 68999999999888888888888884210 011111000 00111122
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCC-CchhHHhhcCee-EEec-CchH-HHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVA-DATD-AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~-ND~~al~~A~vG-Ia~~-~a~~-~a~~aAD~vl~~~~~~~i~~~i 310 (447)
-=..+++.+.-. ...+++|||+. +|+.+-+.||+- |.+. .+.. .....+|+++ +++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 222334444422 35799999998 799999999986 4443 2211 1112467776 3466665544
No 125
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.80 E-value=0.0068 Score=54.80 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=72.0
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHh
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd-~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
.......-.-++.|++.++++.|+++|+++.++|+. ....+..+...+|+..... ..++.+...
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce
Confidence 345555556678899999999999999999999987 8888899989888741000 000000000
Q ss_pred hccchhccChhhH--HHHHHHHhhc------CCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 235 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 235 ~~~v~a~~~p~~K--~~iV~~lq~~------g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
. .+.+.-.+..| ..+.+.+.+. ...++||||...|+.+-+.|++-...
T Consensus 100 ~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 D-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred e-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0 00111111112 2344544432 35699999999999999999987654
No 126
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.77 E-value=0.004 Score=55.64 Aligned_cols=100 Identities=13% Similarity=0.031 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 230 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd---------------~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (447)
++-|++.++|++|++.|+++.++|.. ....+..+.+.+|+. +.. .+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~-ii~~~~~~-------~~ 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDD-VLICPHFP-------DD 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeE-EEECCCCC-------CC
Confidence 36689999999999999999999985 234566677777873 110 11110000 00
Q ss_pred HHHhhccchhccChh--hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 231 ELIEKADGFAGVFPE--HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 231 ~~~~~~~v~a~~~p~--~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
. .....|. -=..+++.+......++||||+.+|+.+-+.+++-...
T Consensus 98 ------~-~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------N-CDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------C-CCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001121 11122233322334699999999999999999987543
No 127
>PLN02940 riboflavin kinase
Probab=96.77 E-value=0.0041 Score=63.52 Aligned_cols=116 Identities=20% Similarity=0.204 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~-~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|++.|+++.|+|+.....+....+ ..|+..-. ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998888776655 56763210 011111000 0111222
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC--chHHHHhhcchhccC
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTE 300 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~--a~~~a~~aAD~vl~~ 300 (447)
+-=..+++.+......|+||||+.+|+.+-+.||+. |++.. ........+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 323344555555567899999999999999999987 33432 222233456666533
No 128
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.76 E-value=0.016 Score=54.88 Aligned_cols=130 Identities=18% Similarity=0.175 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhh--hhcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHH--HhCCCeEEEEcCCc
Q 013242 117 IGRKVNAVINKFAERGLRSLAV--AYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA--LSLGLGVKMITGDQ 192 (447)
Q Consensus 117 ~~~~~~~~~~~~~~~G~r~l~v--A~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l--~~~Gi~v~miTGd~ 192 (447)
+.+..+..+..+.++|.+.--+ +.+.+ |+.|+.++.++.+ +..|+.++++|.-+
T Consensus 42 wt~~m~~vl~~L~~~gvt~~~I~~~l~~i----------------------p~~pgm~~~l~~l~~~~~~~~~~IiSDaN 99 (234)
T PF06888_consen 42 WTEYMDRVLQLLHEQGVTPEDIRDALRSI----------------------PIDPGMKELLRFLAKNQRGFDLIIISDAN 99 (234)
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHcC----------------------CCCccHHHHHHHHHhcCCCceEEEEeCCc
Confidence 4455566667777777444333 23332 4788999999999 46899999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh-hhHHHHHHHHhhc----C---CEEEEE
Q 013242 193 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP-EHKYEIVKHLQAR----N---HICGMI 264 (447)
Q Consensus 193 ~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p-~~K~~iV~~lq~~----g---~~v~~i 264 (447)
......+.+.-|+.... ..++..+..-+.-....+.... .+.+..+.| -=|..+++.+... | .+|++|
T Consensus 100 s~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYi 175 (234)
T PF06888_consen 100 SFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPYH--SHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYI 175 (234)
T ss_pred HhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCcc--CCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEE
Confidence 99999999999985321 0111111100000000000000 022334433 2588999888764 3 689999
Q ss_pred cCCCCchh
Q 013242 265 GNGVNDAP 272 (447)
Q Consensus 265 GDg~ND~~ 272 (447)
|||.||..
T Consensus 176 GDG~nD~C 183 (234)
T PF06888_consen 176 GDGRNDFC 183 (234)
T ss_pred CCCCCCcC
Confidence 99999954
No 129
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.76 E-value=0.0035 Score=54.95 Aligned_cols=98 Identities=18% Similarity=0.181 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 230 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (447)
++.|++.++++.|++.|+++.++|+... ..+..+.+.+|+.... .+......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----~~~~~~~~--------- 93 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG----VLFCPHHP--------- 93 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEECCCCC---------
Confidence 4689999999999999999999998762 4455677778874110 00000000
Q ss_pred HHHhhccchhccChhh--HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 231 ELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 231 ~~~~~~~v~a~~~p~~--K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
........|+. =..+++.+......|+||||...|+.+-+.+++-.
T Consensus 94 -----~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 94 -----ADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000011211 12333444434567999999999999999998853
No 130
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.74 E-value=0.0043 Score=56.11 Aligned_cols=123 Identities=16% Similarity=0.138 Sum_probs=64.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+.|++.++|+.|+++|+++.++|.-.. .....+....|+.-. ..........+ ...
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~i~~~~~~~~~------~~~ 97 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD---GIYYCPHHPEG------VEE 97 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc---EEEECCCCCcc------ccc
Confidence 568999999999999999999997763 111233334444200 00000000000 000
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE--EecCch---HHHHhhcchhcc
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI--AVADAT---DAARSAADIVLT 299 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI--a~~~a~---~~a~~aAD~vl~ 299 (447)
+-.. .....-.|+-=..+.+.++-....++||||..+|+.+-+.|++.. .+..+. ......+|+++.
T Consensus 98 ~~~~-~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 98 FRQV-CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred ccCC-CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 0000 000111122223334444444567999999999999999999853 443221 112234788874
No 131
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.70 E-value=0.0051 Score=56.66 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ..++...+. ....-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57799999999999999999999986654 46677778874210 001100000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
-=..+++.+......++||||+. +|+.+-+.||+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 12234444444456799999997 899999998864
No 132
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.67 E-value=0.0055 Score=55.20 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=61.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~-~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.+.|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... .+ ...-.|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-------~~---------------------~~KP~p 94 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-------PH---------------------AVKPPG 94 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-------cC---------------------CCCCCh
Confidence 577999999999999999999999988 5777778888877310 00 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
+-=..+++.+......++||||.. .|+.+-+.||+-
T Consensus 95 ~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 95 CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 111233333433455699999998 799999999985
No 133
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.65 E-value=0.0039 Score=54.69 Aligned_cols=90 Identities=22% Similarity=0.271 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
..+++.+.++.|++.|+++.++|+.....+....+.. +.. ... .++ +.+ ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~-~f~-~i~-~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD-YFD-LIL-GSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh-cCc-EEE-ecC-----------------CCCCCcCHHH
Confidence 4479999999999999999999999998888887775 421 110 111 000 0011112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcC
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 278 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~ 278 (447)
=..+.+.+.... .+++|||..+|+.+-+.||
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 233344444445 7999999999999888775
No 134
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.44 E-value=0.014 Score=56.43 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=59.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~---~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
..++-|++.+.++.|++.|+++.++|++... .+....+..|+....... ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~-------------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH-------------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-------------------------EEe
Confidence 4557899999999999999999999998743 344666778885321111 111
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 274 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al 274 (447)
+-....|....+.+.+...+++++||..+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 1111245555566666667799999999998643
No 135
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.41 E-value=0.0046 Score=54.32 Aligned_cols=97 Identities=13% Similarity=-0.057 Sum_probs=65.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
-+++|++.+.++.|+ .++++.++|.-....+..+.+.+|+... +-..++.+.+.. ...|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~-------------------~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV-------------------FVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc-------------------ccCC
Confidence 357999999999999 5799999999999999999999987421 111111111110 0112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
. =...++.+......|++|||..+|..+-+.++|-|..
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 1 0112344444566899999999999998888766543
No 136
>PLN02811 hydrolase
Probab=96.41 E-value=0.015 Score=54.42 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=66.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~-~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++|+.|++.|+++.++||....... .+.+..++.. .. ..++.+.+.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh---------------ccCCCCCc
Confidence 46799999999999999999999998765333 2222233321 00 0111111000 00011122
Q ss_pred hhHHHHHHHHh---hcCCEEEEEcCCCCchhHHhhcCeeEE-ecC--chHHHHhhcchhccC
Q 013242 245 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIA-VAD--ATDAARSAADIVLTE 300 (447)
Q Consensus 245 ~~K~~iV~~lq---~~g~~v~~iGDg~ND~~al~~A~vGIa-~~~--a~~~a~~aAD~vl~~ 300 (447)
+-=...++.+. -....|+||||+..|+.+-+.||+-.. +.. .+......+|+++.+
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~ 202 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSS 202 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcC
Confidence 22233444443 334679999999999999999998743 322 122222356777644
No 137
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.34 E-value=0.011 Score=54.40 Aligned_cols=142 Identities=18% Similarity=0.264 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhh--hcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcH
Q 013242 117 IGRKVNAVINKFAERGLRSLAVA--YQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQL 193 (447)
Q Consensus 117 ~~~~~~~~~~~~~~~G~r~l~vA--~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGd~~ 193 (447)
+.+.......++.++|-|.--+. ++.+ |+-|+..++|+.+++.|. .++++|--|.
T Consensus 55 Wne~M~rv~k~Lheqgv~~~~ik~~~r~i----------------------P~~Pgmv~lik~~ak~g~~eliIVSDaNs 112 (256)
T KOG3120|consen 55 WNELMDRVFKELHEQGVRIAEIKQVLRSI----------------------PIVPGMVRLIKSAAKLGCFELIIVSDANS 112 (256)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhcC----------------------CCCccHHHHHHHHHhCCCceEEEEecCch
Confidence 44556677777888887664443 3433 478999999999999997 9999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh--HHHHHHHHhhc-------CCEEEEE
Q 013242 194 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQAR-------NHICGMI 264 (447)
Q Consensus 194 ~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~--K~~iV~~lq~~-------g~~v~~i 264 (447)
.....+.+..|+.+-. ..++..+..-+.-...-+...-.. + -|...|.. |..++..++.. ..++.++
T Consensus 113 fFIe~~Lea~~~~d~F--~~IfTNPa~~da~G~L~v~pyH~~-h-sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYv 188 (256)
T KOG3120|consen 113 FFIEEILEAAGIHDLF--SEIFTNPACVDASGRLLVRPYHTQ-H-SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYV 188 (256)
T ss_pred hHHHHHHHHccHHHHH--HHHhcCCcccCCCCcEEeecCCCC-C-ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEE
Confidence 9999999988874200 000000000000000000000000 1 12233433 66666665443 2279999
Q ss_pred cCCCCc-hhHHhhcCeeEEec
Q 013242 265 GNGVND-APALKKADIGIAVA 284 (447)
Q Consensus 265 GDg~ND-~~al~~A~vGIa~~ 284 (447)
|||.|| +|+++...--+||-
T Consensus 189 GDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 189 GDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCCCCCcCcchhcccCceecc
Confidence 999999 67777776667774
No 138
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.33 E-value=0.015 Score=65.09 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=32.0
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHH
Q 013242 166 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 202 (447)
Q Consensus 166 ~~r~~~~~~I~~l-~~~Gi~v~miTGd~~~~a~~ia~~ 202 (447)
.+.+++.++|++| ++.|+.|+++||+...........
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5678999999997 778999999999999988877644
No 139
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.31 E-value=0.013 Score=55.29 Aligned_cols=88 Identities=18% Similarity=0.288 Sum_probs=57.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~---a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
-|.-|++.++++.|++.|++|+++||+.... +..-.++.|++. +....+.+.... ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------Cc
Confidence 4788999999999999999999999999755 444455677752 111111110000 00
Q ss_pred cChhhHHHHHHHHhhcCC-EEEEEcCCCCchh
Q 013242 242 VFPEHKYEIVKHLQARNH-ICGMIGNGVNDAP 272 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~-~v~~iGDg~ND~~ 272 (447)
-...-|.+.-+.+.+.|+ +++.+||..+|..
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 011226666667776765 5678999999983
No 140
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.25 E-value=0.014 Score=54.95 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=66.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lG---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
.-++.||+.++|++|++.|+++.++|.........+.+..+ +..- . ...+ + ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f-~~~f--------------d-----~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-F-SGYF--------------D-----TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-c-ceEE--------------E-----eCccc
Confidence 35689999999999999999999999988877776666542 2100 0 0000 0 00011
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
.-.|+-=..+++.+.-....++++||...|+.+-+.||+-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1123323445555655556799999999999999999997543
No 141
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.19 E-value=0.0079 Score=56.24 Aligned_cols=97 Identities=12% Similarity=0.177 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.| ++++.++|+.....+....+..|+.... ...++.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 5999999999988888888888885211 01111110000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
-=..+.+.+.-....|+||||+.+|+.+-+.||+.+..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22333444444445699999999999999999988653
No 142
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.16 E-value=0.02 Score=48.97 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=34.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 204 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd-~~~~a~~ia~~lG 204 (447)
++.+++.++|+.|++.|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777777766
No 143
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.12 E-value=0.028 Score=53.50 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=39.0
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~--~ia~~lGi~ 206 (447)
|.+.-...+-|++.++|+.|+++|+++.++|........ ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555566778999999999999999999999986655444 567888885
No 144
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.98 E-value=0.03 Score=64.52 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=78.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
.+.|++.+.|+.|+++|+++.++|+.....+....+.+|+...... .++.+.+.. ...-.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~~-----------------~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAFE-----------------NLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcccc-----------------cCCCCHH
Confidence 3679999999999999999999999999999999999998521111 111111000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC---chHHHHhhcchhccC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD---ATDAARSAADIVLTE 300 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~---a~~~a~~aAD~vl~~ 300 (447)
-=..+++.++.....+++|||..+|+.+-+.|++- |++.. ..+.....+|+++.+
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22344555555567899999999999999999984 44432 223334567777754
No 145
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.96 E-value=0.031 Score=50.17 Aligned_cols=94 Identities=6% Similarity=-0.004 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~------------~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
+-|++.++|+.|++.|+++.++|..... .+..+.+.+|+.. ...+.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~-------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG-------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC--------------
Confidence 3489999999999999999999975542 4566778888741 111111000
Q ss_pred hccchhccChhhHHHHHHHHh--hcCCEEEEEcCCC--------CchhHHhhcCeeE
Q 013242 235 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 281 (447)
Q Consensus 235 ~~~v~a~~~p~~K~~iV~~lq--~~g~~v~~iGDg~--------ND~~al~~A~vGI 281 (447)
.+..-.|+-=..+++.+. -....++||||.. +|+.+-+.||+-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111111123344443 2345799999986 6999999888754
No 146
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.87 E-value=0.0089 Score=57.10 Aligned_cols=63 Identities=21% Similarity=0.252 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhc--------CeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 244 PEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 244 p~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A--------~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
+.+|...++.+.+. ...++|+||+.||.+|++.+ ++||+|+.+. .+..|++++. +...+...+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 45688777776554 34799999999999999999 5788885332 3567899885 466665555
No 147
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.86 E-value=0.016 Score=58.27 Aligned_cols=101 Identities=12% Similarity=0.025 Sum_probs=61.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 229 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd---------------~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 229 (447)
-++.|++.++|+.|+++|+++.|+|+- ....+..+.+..|+. + ..++.+.... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---f-d~i~i~~~~~-------s 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---F-DEVLICPHFP-------E 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---e-eeEEEeCCcC-------c
Confidence 357899999999999999999999983 233455667777763 1 1111110000 0
Q ss_pred hHHHhhccchhccChhh--HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 230 DELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 230 ~~~~~~~~v~a~~~p~~--K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
+ ...++ .|+. =..+.+.+......++||||+.+|..+-+.|++-...
T Consensus 98 d------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 98 D------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred c------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 0 00011 1221 1122222333346799999999999999999987443
No 148
>PLN03017 trehalose-phosphatase
Probab=95.76 E-value=0.039 Score=55.50 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=44.5
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCCCchhHHhhc-----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-------g~~v~~iGDg~ND~~al~~A-----~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.|-+. +..++++||...|-.||+.. ++||.+|.... ...|++.+ ++.+.+..++.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL~ 356 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFLA 356 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHHH
Confidence 799988887653 23589999999999999865 57777874221 25688888 44666665553
No 149
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.55 E-value=0.064 Score=49.57 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=34.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 170 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 170 ~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
.+.+.+.+|+++|+.|+.+|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999986
No 150
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.44 E-value=0.047 Score=48.33 Aligned_cols=110 Identities=12% Similarity=0.239 Sum_probs=77.1
Q ss_pred HHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013242 125 INKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 203 (447)
Q Consensus 125 ~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~-~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l 203 (447)
.+.+..+|.+.+.+=..+ ++ ++..++ .-|+.++=+.+++++|+++.++|..+..-+...+..+
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TL---v~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TL---VPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ce---ecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 567788888888775543 33 333333 6688889999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhH--HHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 204 GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK--YEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 204 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K--~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
|++- ++.-..|-.+ .+.++.++-....|+||||.. .|+-+=..+|+=
T Consensus 84 ~v~f------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred CCce------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 9951 1122223222 233444444466799999985 788776776653
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.28 E-value=0.039 Score=51.13 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=56.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~--a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
++.|++.++++.|++.|+++.++|+..... ........++... .. .++...+ .....-.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-fd-~v~~s~~-----------------~~~~KP~ 154 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-FD-AVVESCL-----------------EGLRKPD 154 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-CC-EEEEeee-----------------cCCCCCC
Confidence 578999999999999999999999875432 2222222333210 00 0000000 0011112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
|+-=..+++.++-....++||||...|+.+-+.||+-
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 2222334444444456699999999999999999985
No 152
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.27 E-value=0.046 Score=54.43 Aligned_cols=91 Identities=15% Similarity=0.076 Sum_probs=66.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~----lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
++.+++.++|+.|++.|+.+.++|..+...+..+.+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 3578999999999999999999999999999999888 7663110 0001
Q ss_pred cChhhHHH----HHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 242 VFPEHKYE----IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 242 ~~p~~K~~----iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
..++.|.+ +++.+.-....++||||...|+.+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 12233444 33444434567999999999999999988876553
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=95.19 E-value=0.058 Score=49.59 Aligned_cols=97 Identities=7% Similarity=-0.027 Sum_probs=58.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~-lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|++.|+++.++|+-+.......... .++... . ..++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEeccc-----------------CCCCCCH
Confidence 4689999999999999999999999876554432221 233110 0 000000000 0011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
+-=..+++.++.....+++|||...|+.+-+.+|+-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2223344555555567999999999999999999864
No 154
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=94.48 E-value=0.072 Score=48.18 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.+++.++|++|+ .+++++|+.....+..+.+.+|+... .. .++...+.... .....-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999997 47999999999999999999998421 11 11111000000 000111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
-=..+++.+......++||||...|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223455556656678999999999999999998754
No 155
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=94.25 E-value=0.11 Score=46.99 Aligned_cols=90 Identities=14% Similarity=0.154 Sum_probs=59.3
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHH
Q 013242 171 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 250 (447)
Q Consensus 171 ~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~i 250 (447)
..+++..|++. +++.++||.....+....+.+|+..-. ..++...+. ....-.|+-=..+
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHHHHH
Confidence 46899999875 899999999999999999999985210 111111000 0111122222334
Q ss_pred HHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 251 VKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 251 V~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
.+.++.....|++|||..+|+.+-+.||+-
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444544445699999999999999999986
No 156
>PLN02645 phosphoglycolate phosphatase
Probab=93.91 E-value=0.11 Score=51.43 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=38.9
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia---~~lGi~ 206 (447)
|++--.+.+-|++.++|+.|++.|++++++|++...+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556777799999999999999999999999976666665 556763
No 157
>PLN02423 phosphomannomutase
Probab=93.71 E-value=0.1 Score=49.87 Aligned_cols=50 Identities=26% Similarity=0.351 Sum_probs=40.5
Q ss_pred hccCh--hhHHHHHHHHhhcCCEEEEEcC----CCCchhHHhh-cCeeEEecCchHHH
Q 013242 240 AGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATDAA 290 (447)
Q Consensus 240 a~~~p--~~K~~iV~~lq~~g~~v~~iGD----g~ND~~al~~-A~vGIa~~~a~~~a 290 (447)
.++.| -+|...++.|+ ....|+++|| |.||.+||+. --.||++.+-.+..
T Consensus 181 iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~ 237 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTR 237 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHH
Confidence 34444 36999999999 7789999999 8999999996 77899997655544
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=93.42 E-value=0.15 Score=46.57 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=54.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--CCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--YPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
++.|++.++++.|++.+ +.+++|.-+........+.+|+..-. +-..++. ++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~-----------------------~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLM-----------------------CGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEE-----------------------eccC
Confidence 36899999999999975 56777765544444455566653100 0000110 1111
Q ss_pred hhhHHHHHHHHhh-c-CCEEEEEcCCCCchhHHhhc--CeeEE
Q 013242 244 PEHKYEIVKHLQA-R-NHICGMIGNGVNDAPALKKA--DIGIA 282 (447)
Q Consensus 244 p~~K~~iV~~lq~-~-g~~v~~iGDg~ND~~al~~A--~vGIa 282 (447)
. .|.+++....+ . ...++||||..+|+.+-+.| |+-..
T Consensus 130 ~-~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 130 E-SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred c-ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 1 12333332222 2 34688999999999999999 98643
No 159
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.25 E-value=0.35 Score=43.36 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=78.3
Q ss_pred HHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC--eEEEEcCC-------cHHHHHH
Q 013242 128 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGD-------QLAIAKE 198 (447)
Q Consensus 128 ~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi--~v~miTGd-------~~~~a~~ 198 (447)
+.+.|.+.+.+=... ++ ...=++.+.|+..+.+++|++.+. +|+++|.. +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 556677766664433 11 123457788999999999999987 49999987 4788999
Q ss_pred HHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhc-----CCEEEEEcCCC-Cchh
Q 013242 199 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 272 (447)
Q Consensus 199 ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~-----g~~v~~iGDg~-ND~~ 272 (447)
+.+.+|+.- -.+....|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999840 012334565566788888755 56799999974 6777
Q ss_pred HHhhcC-eeEEe
Q 013242 273 ALKKAD-IGIAV 283 (447)
Q Consensus 273 al~~A~-vGIa~ 283 (447)
|=...| .+|=+
T Consensus 152 ~gN~~G~~tilv 163 (168)
T PF09419_consen 152 MGNRMGSYTILV 163 (168)
T ss_pred HhhccCceEEEE
Confidence 666665 44433
No 160
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=93.05 E-value=0.14 Score=48.44 Aligned_cols=90 Identities=22% Similarity=0.202 Sum_probs=56.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~---~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
+++-|++.+.++.+++.|++|+.+||+... .+..-.++.|+... ....+.+.... -..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~ 174 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKK 174 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS-
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------ccc
Confidence 356678999999999999999999999864 33444566776421 11111111000 000
Q ss_pred cChhhHHHHHHHHhhcCC-EEEEEcCCCCchhH
Q 013242 242 VFPEHKYEIVKHLQARNH-ICGMIGNGVNDAPA 273 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~-~v~~iGDg~ND~~a 273 (447)
...+.|...-+.+.++|+ +++.+||..+|..-
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 112347777888888855 57889999999875
No 161
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=92.84 E-value=0.33 Score=45.63 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=72.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.++.|++.+.++.|++.|+.+.+.|+.....+..+...+|+.... ..++.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 468899999999999999999999999999999999999985211 1111110000 012234
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
+-=....+.|.-....|+.|.|+.|.+.+-+.||.-+-
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 44455566666667789999999999999999998743
No 162
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=92.28 E-value=0.57 Score=49.50 Aligned_cols=98 Identities=15% Similarity=0.063 Sum_probs=62.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCC------cccccCCcchhhhhcCChhHHHhhccch
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYP------SSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~-lGi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
+++++.+ .+++.|. ++++|+-....+++++++ +|++.-.-. ...+.|.-.. -
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 4555444 4456775 499999999999999987 898621111 1111111000 0
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecC
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 285 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~ 285 (447)
..+.-++|..-++..........+.||+.||.|||+.|+.+.++..
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134566877776433211223789999999999999999999975
No 163
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.96 E-value=0.93 Score=43.77 Aligned_cols=89 Identities=21% Similarity=0.240 Sum_probs=53.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~i---a~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
..|.-|++.+..+.+++.|++|+++||+....-..+ .++.|+... ....+.+.... -.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~--~~LiLR~~~D~-----------------~~ 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW--EKLILKDPQDN-----------------SA 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc--ceeeecCCCCC-----------------cc
Confidence 456778999999999999999999999986432222 344677421 11111111000 00
Q ss_pred ccChhhHHHHHHHHhhcCC-EEEEEcCCCCch
Q 013242 241 GVFPEHKYEIVKHLQARNH-ICGMIGNGVNDA 271 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~-~v~~iGDg~ND~ 271 (447)
.-..+.|...-+.+.+.|+ +++.+||..+|.
T Consensus 204 ~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 204 ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred chhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0112334444455555655 578899999998
No 164
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.53 E-value=0.79 Score=42.60 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-+++.++++.++.. ++++++|...........+++|+..- .......+. ..+..-.|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~------------------~g~~KP~~~ 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED------------------VGVAKPDPE 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc------------------cccCCCCcH
Confidence 4678999999999998 99999999888889999999997421 111111100 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
-=..+.+.+......++||||+. ||+..-+.+|+-
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 22344455555566899999965 775777777764
No 165
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=91.32 E-value=0.15 Score=41.70 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia---~~lGi~ 206 (447)
|++...+.+-|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 445556778899999999999999999999988755544444 566774
No 166
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.24 E-value=1.7 Score=38.54 Aligned_cols=102 Identities=20% Similarity=0.156 Sum_probs=66.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh-----CCCCCCCCcccccCCcc-hhhhhcCChhHHHhh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL-----GMGTNMYPSSALSGQDR-DESIVALPVDELIEK 235 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~---~ia~~l-----Gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (447)
|..++++.+..+.++++|++++-+|++..-.+. ....+. +++. ..++...+. -..+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP~~l~~al~---------- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSPDSLFSALH---------- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECCcchhhhhh----------
Confidence 689999999999999999999999999965443 334444 3321 111111110 00000
Q ss_pred ccchhccChhhHHHHHHHHhhc-----CCEEEEEcCCCCchhHHhhcCee
Q 013242 236 ADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 236 ~~v~a~~~p~~K~~iV~~lq~~-----g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-++..+-.-+.|...++.++.. ...++.+|...+|+.+.+.++|.
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0122333345688888888764 33578899999999999998875
No 167
>PLN02151 trehalose-phosphatase
Probab=90.33 E-value=0.87 Score=45.82 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=43.9
Q ss_pred hHHHHHHHHhhc-C------CEEEEEcCCCCchhHHhhc-----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-g------~~v~~iGDg~ND~~al~~A-----~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...|+.+.+. + ..++++||...|-.||+.. |+||-++.+.. ...|++.+.+ -+.+..++.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHHH
Confidence 799999887654 2 2489999999999999853 67787774221 2368888844 666665554
No 168
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=89.97 E-value=0.44 Score=42.46 Aligned_cols=85 Identities=15% Similarity=0.075 Sum_probs=52.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++ ++.++|.-+........+.+|+..-. ..++.+.+ .....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-----------------~~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDT-----------------VRAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhh-----------------cCCCCCCHH
Confidence 47889999998 37899999988888888988884210 00010000 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhh
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 276 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~ 276 (447)
-=..+.+.+.-....|+||||+..|+.+-+.
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 2244455555556679999999999877654
No 169
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.82 E-value=1.3 Score=43.11 Aligned_cols=48 Identities=19% Similarity=0.221 Sum_probs=35.5
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~---~ia~~lGi~ 206 (447)
|.+.-.+.+-|++.++|++|++.|++++++||+...+.. .-.+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 344445667788999999999999999999997644333 334567774
No 170
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=89.37 E-value=0.97 Score=42.79 Aligned_cols=92 Identities=11% Similarity=0.072 Sum_probs=55.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-|++.++++.|++. +++.++|..+.. .+.+|+..-. ..++... -+....|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f--d~i~~~~-------------------~~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF--EFVLRAG-------------------PHGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh--ceeEecc-------------------cCCcCCCc
Confidence 4678999999999975 899999986654 1455653110 0000000 00111121
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCC-CCchhHHhhcCeeEEec
Q 013242 246 --HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAVA 284 (447)
Q Consensus 246 --~K~~iV~~lq~~g~~v~~iGDg-~ND~~al~~A~vGIa~~ 284 (447)
-=..+++.+.-....++||||+ ..|+.+-+.||+-...-
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 1122334444445679999999 59999999999875543
No 171
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=88.91 E-value=0.73 Score=44.99 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=38.2
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 167 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 167 ~r-~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
+| |++.+++++|++.|+++.++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999973
No 172
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.57 E-value=0.56 Score=45.10 Aligned_cols=48 Identities=23% Similarity=0.370 Sum_probs=37.0
Q ss_pred EeccCCCC----CCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCC
Q 013242 159 GLIPLFDP----PIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~----~r~~~~~~I~~l~~~Gi~v~miTGd~~~~---a~~ia~~lGi~ 206 (447)
|.+--.+. +-|++.++|++|+++|++++++||+...+ .....+.+|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999987665 44455666774
No 173
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=87.96 E-value=0.9 Score=43.43 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=39.5
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTG---d~~~~a~~ia~~lGi~ 206 (447)
|.+.-.+.+-|++.++|++|++.|++++++|| +.........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566677999999999999999999996 6678788888888885
No 174
>PTZ00174 phosphomannomutase; Provisional
Probab=87.67 E-value=0.88 Score=43.38 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR 201 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~ 201 (447)
++.+.++++|++++++|++++++||++.........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 488999999999999999999999999986655443
No 175
>PRK10444 UMP phosphatase; Provisional
Probab=87.35 E-value=0.6 Score=44.71 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=39.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 203 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l 203 (447)
|++.-.+.+-|++.++|+.|++.|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 556666788999999999999999999999999998888777765
No 176
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=86.82 E-value=2 Score=45.74 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=33.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL------------AIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~------------~~a~~ia~~lGi~ 206 (447)
+-|++.++|+.|++.|++++|+|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997544 3466778888874
No 177
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=86.77 E-value=0.56 Score=41.76 Aligned_cols=95 Identities=15% Similarity=0.040 Sum_probs=62.2
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 163 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 163 l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
+.=..||++.+.++.|.+. +.+++.|-.....|..+.+.++.....+.. .+..... ..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~-~l~r~~~--------------------~~ 96 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISR-RLYRESC--------------------VF 96 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeE-EEEcccc--------------------EE
Confidence 3345899999999999987 999999999999999999999874211111 1110000 00
Q ss_pred ChhhHHHHHHHH---hhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 243 FPEHKYEIVKHL---QARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 243 ~p~~K~~iV~~l---q~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
.|..+++.| ......|+++||...|..+-..+++-|.
T Consensus 97 ---~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 ---TNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred ---eCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 001122323 3334579999999998877766655544
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.69 E-value=0.59 Score=44.94 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=67.0
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc-----cchhcc
Q 013242 168 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA-----DGFAGV 242 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~a~~ 242 (447)
-++..++++.|++.|+++.++|+............+|+.. +...+... ..+..-
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP 180 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKP 180 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCC
Confidence 3678889999999999999999876543332222222210 00000000 011122
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee-EEecCc--h-H---HHHhhcchhccCCChhHHHHHH
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVADA--T-D---AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~~a--~-~---~a~~aAD~vl~~~~~~~i~~~i 310 (447)
.|+-=..+++.+......++||||.. +|+.+-+.+++- |.+..+ . . .....+|+++ +++..+...+
T Consensus 181 ~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~l 254 (257)
T TIGR01458 181 SKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDLI 254 (257)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHHH
Confidence 22222334445554567899999996 999999999886 334322 1 1 1123467776 4466665443
No 179
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=86.28 E-value=1.3 Score=43.35 Aligned_cols=40 Identities=3% Similarity=-0.135 Sum_probs=36.8
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 167 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r-~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+| |++.++|++|+++|+++.++|+.....+..+.+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 45 99999999999999999999988888889999999996
No 180
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=85.29 E-value=3.5 Score=41.42 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=34.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-C
Q 013242 168 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G 204 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l-G 204 (447)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999999996 6
No 181
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=83.53 E-value=1.8 Score=36.87 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=28.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIA 196 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a 196 (447)
+++.+++.++++.+++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56889999999999999999999999987643
No 182
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=82.23 E-value=8.6 Score=34.91 Aligned_cols=103 Identities=12% Similarity=0.182 Sum_probs=54.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCc--chhhhh--cCChhHHH--hhc-cch
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--RDESIV--ALPVDELI--EKA-DGF 239 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~--~~~-~v~ 239 (447)
+.+++.+++..++++|++++|+|.- -|+....++...+.... ....+. ...++.++ ..+ ...
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~ 100 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDN 100 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCC
Confidence 5689999999999999999999952 23322111111000000 000000 00011100 000 001
Q ss_pred hccChhhHHHHHHHHhhc---CCEEEEEcCCCCchhHHhhcCee
Q 013242 240 AGVFPEHKYEIVKHLQAR---NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~---g~~v~~iGDg~ND~~al~~A~vG 280 (447)
|.+-......+.+.+++. -....+|||...|..+-..|++.
T Consensus 101 c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 101 CDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 222222234445555554 36789999999999999999987
No 183
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.54 E-value=2.7 Score=37.80 Aligned_cols=90 Identities=27% Similarity=0.352 Sum_probs=59.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH----HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA----IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~----~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
|++-+++.|..-++.|=+++.+||+.+- +++.+++...|. ++. .. +|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~-pv------------------------~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMN-PV------------------------IFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCc-ce------------------------eeccC
Confidence 5666778888888999999999999864 455666666663 211 11 23332
Q ss_pred Ch-hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEe
Q 013242 243 FP-EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 283 (447)
Q Consensus 243 ~p-~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~ 283 (447)
.| ..++.-..++|.++ .-+.-||+-||+.|-+.|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 22 11223344566555 44678999999999999986 4554
No 184
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=80.90 E-value=6.2 Score=37.63 Aligned_cols=134 Identities=15% Similarity=0.135 Sum_probs=68.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCC-cc--hhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ-DR--DESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~v~a~ 241 (447)
-.+|+++.+.++.|++.+|.+.+.|+.=-....++.++-|...+.. .++... .. +..+.... ++++ +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv--~VvSN~M~Fd~~g~l~gF~-~~lI---H---- 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV--KVVSNFMDFDEDGVLVGFK-GPLI---H---- 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE--EEEEE-EEE-TTSBEEEE--SS----------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe--EEEeeeEEECCcceEeecC-CCce---E----
Confidence 3589999999999999999999999988888888888887543211 011000 00 00000000 0000 0
Q ss_pred cChhhHHH--H--HHHHhh--cCCEEEEEcCCCCchhHHhhc---CeeEEec--Cc-----hHHHHhhcchhccCCChhH
Q 013242 242 VFPEHKYE--I--VKHLQA--RNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGLNV 305 (447)
Q Consensus 242 ~~p~~K~~--i--V~~lq~--~g~~v~~iGDg~ND~~al~~A---~vGIa~~--~a-----~~~a~~aAD~vl~~~~~~~ 305 (447)
+-.|-+ + ....++ ....|+..||+.-|+.|-.-. +.-+.+| |. -+.-.++=|+|+.++.--.
T Consensus 159 --~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 159 --TFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp --TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred --EeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 001111 0 011222 245799999999999998665 3344444 32 2234568899999876444
Q ss_pred HHHHH
Q 013242 306 IITAV 310 (447)
Q Consensus 306 i~~~i 310 (447)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 185
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=76.93 E-value=5.2 Score=36.99 Aligned_cols=51 Identities=20% Similarity=0.335 Sum_probs=42.2
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHhCCC
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRLGMG 206 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~i---a~~lGi~ 206 (447)
.+-|.+-++|..-|++.++++.|+.++.+|..+|.-....-..+ .++||++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 56799999999999999999999999999999987666554444 4566775
No 186
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=73.55 E-value=3.9 Score=38.72 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=51.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc---c-chhccC
Q 013242 168 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA---D-GFAGVF 243 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-v~a~~~ 243 (447)
-++..++++.+++.|++. ++|+.....+.......|... +...++.+ . .+..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~---------------------~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY---------------------YAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH---------------------HHHHHHHhCCcEecCCCCC
Confidence 478899999999999997 778766554433333333210 00111000 0 011112
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCC-CCchhHHhhcCeeE
Q 013242 244 PEHKYEIVKHLQAR-NHICGMIGNG-VNDAPALKKADIGI 281 (447)
Q Consensus 244 p~~K~~iV~~lq~~-g~~v~~iGDg-~ND~~al~~A~vGI 281 (447)
|+-=..+.+.+... ...++||||. .+|+.+=+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 22223344444332 3479999999 59999999988753
No 187
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=73.05 E-value=4 Score=39.55 Aligned_cols=46 Identities=22% Similarity=0.247 Sum_probs=38.4
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013242 158 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 203 (447)
Q Consensus 158 lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l 203 (447)
=|++.--+.+=|++.++|+.|+++|++++++|.....+...+++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3677777889999999999999999999999988877776554443
No 188
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=70.98 E-value=15 Score=35.61 Aligned_cols=52 Identities=19% Similarity=0.022 Sum_probs=40.3
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 154 PWQFIGLIPLFDPPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 154 ~~~~lG~i~l~d~~r~~~~~~I~~l~~~-Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
-+.-+..-+...++-++..+.++.|... ...|+|+||+..........-.|+
T Consensus 28 Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 28 TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 3444555566777889999999999887 568999999999988877664444
No 189
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=70.00 E-value=22 Score=33.76 Aligned_cols=86 Identities=13% Similarity=0.063 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH----HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAI----AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~----a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
.+-|++.+.++..-+.|.+|..+|.+.... +..-.++.|+.....+...+. +
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk------------------------k 177 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK------------------------K 177 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe------------------------e
Confidence 356899999999999999999999988765 445566777853221111111 1
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhh
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 276 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~ 276 (447)
....|..--+.+++-..+|+.|||..+|-.....
T Consensus 178 -~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 178 -DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred -CCCcHHHHHHHHhhccceeeEecCchhhhcchhh
Confidence 1112222223333355678889999999754443
No 190
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=69.24 E-value=52 Score=27.74 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=37.0
Q ss_pred HHHHHHHhhcCCEEEEEcCCCC--chhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHH
Q 013242 248 YEIVKHLQARNHICGMIGNGVN--DAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 324 (447)
Q Consensus 248 ~~iV~~lq~~g~~v~~iGDg~N--D~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~ 324 (447)
.++++.+ .+-+.+...|-|.| |.++++.-||-++-..+ -.+...|+++ ...--..-..++.+.+|+..|+
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g-~~~~aVAE~a-----~~T~e~~~~~~~~~~~ni~~~l 123 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNVPG-YNAEAVAEHA-----GYTDEARERMAEIAAENIERFL 123 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-TT-TTHHHHHHHH-----TGBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEeCC-cCCcchhccc-----hhHHHHHHHHHHHHHHHHHHHH
Confidence 3455555 34457888899988 77788888777775422 1123345555 1111222233445556665553
No 191
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=67.37 E-value=26 Score=34.80 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=38.6
Q ss_pred EeccCCCCCCcchHHHHHHHHhC----CCeEEEEcCCc---HH-HHHHHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSL----GLGVKMITGDQ---LA-IAKETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~----Gi~v~miTGd~---~~-~a~~ia~~lGi~ 206 (447)
|++.-.+++-+++.++++.|+.. |+++..+|... .. .+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 67777788999999999999998 99999999654 33 355556788874
No 192
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=67.07 E-value=11 Score=33.91 Aligned_cols=40 Identities=18% Similarity=0.198 Sum_probs=31.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miT-Gd~~~~a~~ia~~lGi~ 206 (447)
+-|++++.|+.|++.|+++.++| -+.+..|+.+.+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 56999999999999999999999 57789999999999996
No 193
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=64.34 E-value=20 Score=34.06 Aligned_cols=104 Identities=16% Similarity=0.145 Sum_probs=60.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+-++..++++.||+.|..+.++|.=... ...+-..+|+..- +|.++..+.+ .-..|+-
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~--------------------fD~vv~S~e~-g~~KPDp 171 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAY--------------------FDFVVESCEV-GLEKPDP 171 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHh--------------------hhhhhhhhhh-ccCCCCh
Confidence 3455669999999999888888843332 2255566666310 1111111111 1112222
Q ss_pred --HHHHHHHHhhcCCEEEEEcC-CCCchhHHhhcCee-EEecCchHHHHh
Q 013242 247 --KYEIVKHLQARNHICGMIGN-GVNDAPALKKADIG-IAVADATDAARS 292 (447)
Q Consensus 247 --K~~iV~~lq~~g~~v~~iGD-g~ND~~al~~A~vG-Ia~~~a~~~a~~ 292 (447)
=...++.++.+...|+++|| ..||...-+.+|.- +=+.+.....+.
T Consensus 172 ~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 172 RIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred HHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 23445666666778999999 57999999888864 444555444443
No 194
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=63.09 E-value=17 Score=34.36 Aligned_cols=48 Identities=27% Similarity=0.281 Sum_probs=35.9
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHH-hCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRR-LGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT---Gd~~~~a~~ia~~-lGi~ 206 (447)
|++.-.+.+=+++.++|+.+++.|++++++| |...........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 5555567777899999999999999999998 5555555444444 6763
No 195
>PTZ00445 p36-lilke protein; Provisional
Probab=62.91 E-value=11 Score=35.04 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEE------------eccCCCCCCcchHHHHHHHHhCCCe
Q 013242 117 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG------------LIPLFDPPIHDSAETIRRALSLGLG 184 (447)
Q Consensus 117 ~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG------------~i~l~d~~r~~~~~~I~~l~~~Gi~ 184 (447)
..+..+..++.|.+.|.+++++=... ++++ ..-+--.++|+.+.-+++|++.||+
T Consensus 27 ~~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~ 93 (219)
T PTZ00445 27 PHESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIK 93 (219)
T ss_pred HHHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCe
Confidence 34556666778889999988876543 3333 1112223799999999999999999
Q ss_pred EEEEcCCcH
Q 013242 185 VKMITGDQL 193 (447)
Q Consensus 185 v~miTGd~~ 193 (447)
|.++|=-..
T Consensus 94 v~VVTfSd~ 102 (219)
T PTZ00445 94 ISVVTFSDK 102 (219)
T ss_pred EEEEEccch
Confidence 999994443
No 196
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=61.98 E-value=17 Score=32.14 Aligned_cols=43 Identities=14% Similarity=0.038 Sum_probs=38.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
.=.+||++.+.++.|++. +++.++|.-....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345899999999999955 9999999999999999999998753
No 197
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=61.00 E-value=6.7 Score=38.04 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=25.4
Q ss_pred HHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeE
Q 013242 249 EIVKHLQARNHICGMIGNGV-NDAPALKKADIGI 281 (447)
Q Consensus 249 ~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGI 281 (447)
.+++.+......++||||.. .|+.+-+.|++--
T Consensus 210 ~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 210 CITENFSIDPARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred HHHHHhCCChhhEEEECCChHHHHHHHHHcCCcE
Confidence 34455554567899999995 9999999999863
No 198
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=59.29 E-value=34 Score=32.21 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=58.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC-CCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG-MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lG-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+-||+.+.++.|+..|+.+.++|+.+..+...--...+ +.. .+...++ |++.+-. ...-.|+
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~-~d~~~v~---------------~gKP~Pd 155 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVL-GDDPEVK---------------NGKPDPD 155 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCee-cCCcccc---------------CCCCCch
Confidence 45699999999999999999999997766654444444 321 1122222 2211100 0112222
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 246 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 246 ~K~~iV~~lq~~g-~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
-=....+.+.... ..|+.+.|..+=+.|-+.|+.=+-+
T Consensus 156 i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 156 IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 2233344454444 6777888887777777777766444
No 199
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=58.29 E-value=4.4 Score=36.31 Aligned_cols=14 Identities=36% Similarity=0.292 Sum_probs=12.9
Q ss_pred EEecchhhcccCce
Q 013242 4 LCCDKTGTLTLNKL 17 (447)
Q Consensus 4 i~~DKTGTLT~n~~ 17 (447)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999994
No 200
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=55.17 E-value=11 Score=28.41 Aligned_cols=52 Identities=27% Similarity=0.368 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCEEEEEcCC-CCchhHHhhcCee-EEecC---chHHH---Hhhcchhcc
Q 013242 248 YEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVAD---ATDAA---RSAADIVLT 299 (447)
Q Consensus 248 ~~iV~~lq~~g~~v~~iGDg-~ND~~al~~A~vG-Ia~~~---a~~~a---~~aAD~vl~ 299 (447)
..+.+.+......++||||. ..|+.+=+.+|+- |.+.. ..+.. ...+|+|+.
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 34455555555679999999 9999999999986 34432 22222 246788773
No 201
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.11 E-value=35 Score=33.67 Aligned_cols=69 Identities=19% Similarity=0.244 Sum_probs=44.5
Q ss_pred chhccChhhHHHHHHHHhh--cCCEEEEEcCC-CCchh---HHhhcCeeEEecC----chHHHHhhcchhccCCChhHH
Q 013242 238 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNG-VNDAP---ALKKADIGIAVAD----ATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~--~g~~v~~iGDg-~ND~~---al~~A~vGIa~~~----a~~~a~~aAD~vl~~~~~~~i 306 (447)
.|.=|+|..=.++++..+- .|..++++|-| .--.| +|..++..+.+-+ ....+-..||+|+..-+-..+
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~ 215 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRL 215 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhc
Confidence 4566777766677776654 48999999997 54444 5667777776642 123334578999876444433
No 202
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=54.11 E-value=12 Score=35.29 Aligned_cols=56 Identities=25% Similarity=0.362 Sum_probs=28.6
Q ss_pred hHHHHHHHHhhc-C------CEEEEEcCCCCchhHHhhc------CeeEEecCch-HHHHhhcchhccCC
Q 013242 246 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA------DIGIAVADAT-DAARSAADIVLTEP 301 (447)
Q Consensus 246 ~K~~iV~~lq~~-g------~~v~~iGDg~ND~~al~~A------~vGIa~~~a~-~~a~~aAD~vl~~~ 301 (447)
.|...|+.+-+. + ..++++||...|-.||+.. +++|-++..+ ..-..+|++-+.++
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 489999877664 3 3699999999999999873 5677777543 33345677766554
No 203
>PLN02423 phosphomannomutase
Probab=52.48 E-value=21 Score=33.92 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=29.4
Q ss_pred EeccCCC-CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH
Q 013242 159 GLIPLFD-PPIHDSAETIRRALSLGLGVKMITGDQLAIAK 197 (447)
Q Consensus 159 G~i~l~d-~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~ 197 (447)
|.+.-.| ++.+.+.++|++|++. ++++++||+......
T Consensus 16 GTLl~~~~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~ 54 (245)
T PLN02423 16 GTLTAPRKEATPEMLEFMKELRKV-VTVGVVGGSDLSKIS 54 (245)
T ss_pred CCCcCCCCcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHH
Confidence 3343333 5889999999999987 999999999776543
No 204
>PRK13671 hypothetical protein; Provisional
Probab=49.37 E-value=1e+02 Score=30.42 Aligned_cols=97 Identities=20% Similarity=0.249 Sum_probs=62.0
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhC-C--CeEEEEcCCcHHH----------HHHHHHHhCCCCCCCCcccccCCcchhh
Q 013242 157 FIGLIPLFDPPIHDSAETIRRALSL-G--LGVKMITGDQLAI----------AKETGRRLGMGTNMYPSSALSGQDRDES 223 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~~~~I~~l~~~-G--i~v~miTGd~~~~----------a~~ia~~lGi~~~~~~~~~~~~~~~~~~ 223 (447)
.+|+|+=.||+-.|=...++++++. + .-+++.+|+...- -...+...|.|-
T Consensus 2 ~~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~qrg~pa~~~~~~R~~ma~~~G~DL---------------- 65 (298)
T PRK13671 2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQRGEIAVASFEKRKKIALKYGVDK---------------- 65 (298)
T ss_pred ceeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCCCCCCCCCCCHHHHHHHHHHcCCCE----------------
Confidence 4799999999999999999999884 3 3466678887532 234555566541
Q ss_pred hhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhh
Q 013242 224 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 276 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~ 276 (447)
.-..|..-....++.||. ..|+.|...|-..+++|.-.+|...|+.
T Consensus 66 ViELP~~~a~~sAe~FA~-------gaV~lL~~lgvd~l~FGsE~~d~~~l~~ 111 (298)
T PRK13671 66 VIKLPFEYATQAAHIFAK-------GAIKKLNKEKIDKLIFGSESNDIELMYK 111 (298)
T ss_pred EEeccHHHHhhchHHHHH-------HHHHHHHHcCCCEEEECCCCCCHHHHHH
Confidence 111222222222233332 3567777777668999999999866644
No 205
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=49.27 E-value=18 Score=32.31 Aligned_cols=43 Identities=19% Similarity=0.118 Sum_probs=32.5
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 200 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia 200 (447)
.++|+-+-- =.+.+.++|+.+++.|+.|+.+||++--....++
T Consensus 112 vLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 112 VLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred EEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 555554443 3478999999999999999999999865554444
No 206
>PRK13670 hypothetical protein; Provisional
Probab=47.36 E-value=73 Score=32.67 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=66.4
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHh---CCCeEEEEcCCc----------HHHHHHHHHHhCCCCCCCCcccccCCcchh
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALS---LGLGVKMITGDQ----------LAIAKETGRRLGMGTNMYPSSALSGQDRDE 222 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~---~Gi~v~miTGd~----------~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~ 222 (447)
..+|+|+=.||+-.|=...|+++++ .|..+++++|+- ...-..++.++|++--
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~v-------------- 67 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDLV-------------- 67 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCEE--------------
Confidence 5789999999999999999988875 477777777762 2233455666666410
Q ss_pred hhhcCChhHHHhhccchhccChhhHHH-HHHHHhhcCCEEEEEcCCCCchhHHhh
Q 013242 223 SIVALPVDELIEKADGFAGVFPEHKYE-IVKHLQARNHICGMIGNGVNDAPALKK 276 (447)
Q Consensus 223 ~~~~~~~~~~~~~~~v~a~~~p~~K~~-iV~~lq~~g~~v~~iGDg~ND~~al~~ 276 (447)
-..+ -.|+..+|++=.+ .|+.|...|-..+.+|....|...|+.
T Consensus 68 --ielp--------f~~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 68 --VELP--------FLYSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred --EEeC--------CchHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 0011 1267788876654 466675567778899998888766655
No 207
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=46.95 E-value=56 Score=29.26 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=65.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhH
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAI-AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 247 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~-a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K 247 (447)
-|..+++.++++.|-++.+++=.+... ...+.+.+|+.- ..+.--++++=
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-----------------------------~~~~~~~~~e~ 114 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-----------------------------KIYPYDSEEEI 114 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-----------------------------EEEEESSHHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-----------------------------EEEEECCHHHH
Confidence 356666777777777777777555443 666677777631 12333456666
Q ss_pred HHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHH
Q 013242 248 YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 322 (447)
Q Consensus 248 ~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~ 322 (447)
...++.++..| .-+.+|++.- +..-+. .--..++..++.++|..++.+++.+.+..++
T Consensus 115 ~~~i~~~~~~G-~~viVGg~~~-~~~A~~---------------~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 115 EAAIKQAKAEG-VDVIVGGGVV-CRLARK---------------LGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHTT---EEEESHHH-HHHHHH---------------TTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CcEEECCHHH-HHHHHH---------------cCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 77788888777 4456666531 111122 2234567778899999999999999887654
No 208
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=44.68 E-value=59 Score=29.64 Aligned_cols=93 Identities=14% Similarity=0.148 Sum_probs=56.2
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 163 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 163 l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
+.-++-||+.++|++-++.|++|.+-|..... |++|=+..... .++......|...
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~-----AQkL~Fghs~a-------------------gdL~~lfsGyfDt 155 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-----AQKLFFGHSDA-------------------GDLNSLFSGYFDT 155 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCch-----hHHHhhccccc-------------------ccHHhhhcceeec
Confidence 45678899999999999999999999866543 23332211100 0011111112222
Q ss_pred Chh------hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe
Q 013242 243 FPE------HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI 279 (447)
Q Consensus 243 ~p~------~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v 279 (447)
+-- .=..|++.+.-..+.++++.|..+...|-+.+|+
T Consensus 156 tiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 156 TIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred cccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcch
Confidence 211 1245666666667789999999988877665554
No 209
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=42.93 E-value=26 Score=29.19 Aligned_cols=40 Identities=25% Similarity=0.356 Sum_probs=30.2
Q ss_pred CCcchHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLG-VKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~-v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+.+.+.+.++++.+.|++ +|+.+|.....+...+++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 556788999999999995 8999999899999999999873
No 210
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=42.72 E-value=43 Score=27.71 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=28.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
-.+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 457889999999999999999998774 3445655554
No 211
>PLN02645 phosphoglycolate phosphatase
Probab=42.35 E-value=46 Score=32.85 Aligned_cols=59 Identities=10% Similarity=0.114 Sum_probs=36.3
Q ss_pred HHHHHhhcCCEEEEEcCCC-CchhHHhhcCee-EEe--cCch-HHHH-----hhcchhccCCChhHHHHHH
Q 013242 250 IVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAV--ADAT-DAAR-----SAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 250 iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~--~~a~-~~a~-----~aAD~vl~~~~~~~i~~~i 310 (447)
+++.+......++||||.. +|+.+-+.||+- |.+ |..+ +... ..+|+++ +++..+..++
T Consensus 239 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 239 LANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 3444444566899999997 999999999964 233 3222 2222 2467777 4466655433
No 212
>cd01917 ACS_2 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA. ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA.
Probab=42.07 E-value=68 Score=31.12 Aligned_cols=139 Identities=14% Similarity=0.222 Sum_probs=78.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
-.+++...++.+++.|+-| .++||-.....+-+.++|......|. | +...... -..-.++-+.+|+.+.|-+
T Consensus 139 ~~e~~~~I~~e~q~r~~lv-~l~G~i~~q~~E~G~~lg~~~~lvp~----G-~~ts~~H--~~g~AiRaAliFggv~pGn 210 (287)
T cd01917 139 DSKALKKIVDDLMGRGFML-FLCDEIVEQLLEENVKLGLDYIAYPL----G-NFTQAIH--AANYALRAGLMFGGIEPGK 210 (287)
T ss_pred ChHHHHHHHHHHHHCCcEE-EEecHHHHHHHHcCCeeccceeEeec----C-chhhHHH--HHHHHHHHHHHhCCCCCcC
Confidence 4467788899999999955 45675333333334455554221111 1 1000000 0111233445799999999
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCCCchhHHhh-----cCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHH
Q 013242 247 KYEIVKHLQAR-NHICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 314 (447)
Q Consensus 247 K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~-----A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r 314 (447)
..++..+..++ +..|.+.| ...|...--. .++.+-..+.-+..+..-+.++.+++.+.+++-=.+.|
T Consensus 211 ~~ei~dY~~nRV~Afv~A~G-~~s~~~~A~aaGai~~GfPVI~d~~~pei~~~P~~~~~~~~~d~iv~~alE~R 283 (287)
T cd01917 211 REEIRDYQRRRVRAFVLYLG-ELDMVKTAAAAGAIFTGFPVITDQELPEDKQIPDWFFSSSDYDKIVQNALEMR 283 (287)
T ss_pred HHHHHHHHHhhcCEEEEecc-ccCHHHHHHHhhHHHcCCCEEeCCCCcccccCccceecCCCHHHHHHHHHHhc
Confidence 99999998876 77888898 3444332221 12222222344444445578888888888876544444
No 213
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=41.64 E-value=42 Score=32.91 Aligned_cols=48 Identities=25% Similarity=0.377 Sum_probs=40.0
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH---HhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~---~lGi~ 206 (447)
|++-..+.+-|++.++++.|+..|-++.++|...-.+-+..++ .+|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 6777788999999999999999999999999988776666554 56664
No 214
>COG4996 Predicted phosphatase [General function prediction only]
Probab=40.66 E-value=62 Score=27.84 Aligned_cols=56 Identities=18% Similarity=0.125 Sum_probs=46.9
Q ss_pred CCCCcEEEEeccCCCC------CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 151 SGSPWQFIGLIPLFDP------PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 151 ~e~~~~~lG~i~l~d~------~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
.+.+++.+.-..++|. ++++++++++.+++.|+-+-.+|=.....|....+.+++.
T Consensus 20 l~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 20 LEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred cCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 3455566666666664 7899999999999999999999999999999999999985
No 215
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=40.41 E-value=57 Score=25.01 Aligned_cols=47 Identities=15% Similarity=0.295 Sum_probs=37.2
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEE-EcCCcHHHHHHHHHHhCCC
Q 013242 160 LIPLFDPPIHDSAETIRRALSLGLGVKM-ITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~m-iTGd~~~~a~~ia~~lGi~ 206 (447)
++++.+...+.+.+..+.|++.|+.|.+ ..+.....-...|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 4455666778888899999999999988 5677777777788888874
No 216
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=38.75 E-value=93 Score=30.51 Aligned_cols=38 Identities=26% Similarity=0.307 Sum_probs=28.0
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHH-HHHHHHhCCC
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAIA-KETGRRLGMG 206 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~a-~~ia~~lGi~ 206 (447)
+++...=+.|+..|.+++++|......+ ....+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 4666667888999999999998775544 4566666664
No 217
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=38.24 E-value=28 Score=31.55 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=22.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLA 194 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~ 194 (447)
+|-|++.+++++|.+.|..++++|+....
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 46689999999999999988888887643
No 218
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.74 E-value=1.5e+02 Score=28.92 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=41.6
Q ss_pred chhccChhhHHHHHHHHhh--cCCEEEEEcC-CCCchh---HHhhcCeeEEec--Cch--HHHHhhcchhccCCC
Q 013242 238 GFAGVFPEHKYEIVKHLQA--RNHICGMIGN-GVNDAP---ALKKADIGIAVA--DAT--DAARSAADIVLTEPG 302 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~--~g~~v~~iGD-g~ND~~---al~~A~vGIa~~--~a~--~~a~~aAD~vl~~~~ 302 (447)
.|.=|+|..=.++++.++- .|..++++|- |.--.| +|..++.-+.+- ... ...-..||+|+..-+
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg 210 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIG 210 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecC
Confidence 3566778766666666653 4889999999 555544 566666666553 222 223467899987544
No 219
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=34.86 E-value=60 Score=30.96 Aligned_cols=112 Identities=22% Similarity=0.195 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHH----------HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAI----------AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~----------a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
+++-.++-|+.+++.||.| .+|..... -...++++|++. ++-.
T Consensus 52 ~~~~l~eki~l~~~~gV~v--~~GGtl~E~a~~q~~~~~yl~~~k~lGf~~-------------------------IEiS 104 (244)
T PF02679_consen 52 PEEILKEKIDLAHSHGVYV--YPGGTLFEVAYQQGKFDEYLEECKELGFDA-------------------------IEIS 104 (244)
T ss_dssp TCHHHHHHHHHHHCTT-EE--EE-HHHHHHHHHTT-HHHHHHHHHHCT-SE-------------------------EEE-
T ss_pred CHHHHHHHHHHHHHcCCeE--eCCcHHHHHHHhcChHHHHHHHHHHcCCCE-------------------------EEec
Confidence 4455889999999999765 47766432 234566666641 0111
Q ss_pred cchhccChhhHHHHHHHHhhcCCEEEE-EcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHH
Q 013242 237 DGFAGVFPEHKYEIVKHLQARNHICGM-IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g~~v~~-iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~ 307 (447)
+.+-.+.+++|.++|+..++.|..|.. +| .-|...-..-++.--+..+......-||.|+.+...++-.
T Consensus 105 dGti~l~~~~r~~~I~~~~~~Gf~v~~EvG--~K~~~~~~~~~~~~~i~~~~~dLeAGA~~ViiEarEsG~~ 174 (244)
T PF02679_consen 105 DGTIDLPEEERLRLIRKAKEEGFKVLSEVG--KKDPESDFSLDPEELIEQAKRDLEAGADKVIIEARESGKG 174 (244)
T ss_dssp -SSS---HHHHHHHHHHHCCTTSEEEEEES---SSHHHHTT--CCHHHHHHHHHHHHTECEEEE--TTT--S
T ss_pred CCceeCCHHHHHHHHHHHHHCCCEEeeccc--CCCchhcccCCHHHHHHHHHHHHHCCCCEEEEeeeccCCC
Confidence 245677899999999999999887765 77 3344333332232223344445556688888876655543
No 220
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=34.42 E-value=1.2e+02 Score=28.87 Aligned_cols=53 Identities=26% Similarity=0.317 Sum_probs=44.8
Q ss_pred CCCcEEEEeccCCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 152 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 152 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~---Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
+.+|.=+=+++=.+-+-||..++|+.++.. |..|+-++-|++..++.++.- |-
T Consensus 90 ~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~-G~ 145 (248)
T cd04728 90 GTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA-GC 145 (248)
T ss_pred CCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CC
Confidence 467777888888888999999999999999 999997788888888888764 43
No 221
>PLN02591 tryptophan synthase
Probab=34.19 E-value=2e+02 Score=27.52 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=28.1
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCC---chhHHhhc-CeeEEecCc
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVN---DAPALKKA-DIGIAVADA 286 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~N---D~~al~~A-~vGIa~~~a 286 (447)
|.+-.+.++.+++....-+++|=|++ |+..+... -=|+-+|++
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 45556677788776566677899998 55555444 336666554
No 222
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=34.14 E-value=34 Score=30.19 Aligned_cols=24 Identities=17% Similarity=0.201 Sum_probs=20.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITG 190 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTG 190 (447)
+.+++.++|++|.+.|++++|+|.
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC
Confidence 345799999999999999999984
No 223
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=32.92 E-value=44 Score=27.70 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=25.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIA 196 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a 196 (447)
-.+++.++++.+++.|++|+.+|+......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 457899999999999999999999765433
No 224
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=32.43 E-value=70 Score=24.93 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=37.7
Q ss_pred EEeccCCC---CCCcchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 013242 158 IGLIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 158 lG~i~l~d---~~r~~~~~~I~~l~~~Gi~v~mi-TGd~~~~a~~ia~~lGi~ 206 (447)
+.++++.+ ...+-+.+..+.|+++|+.+.+- ++++......-|...|++
T Consensus 2 v~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 2 VVIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 35666777 66677888899999999998888 555666677788888874
No 225
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=32.32 E-value=2.4e+02 Score=26.81 Aligned_cols=121 Identities=17% Similarity=0.235 Sum_probs=66.9
Q ss_pred HHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHH
Q 013242 172 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIV 251 (447)
Q Consensus 172 ~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV 251 (447)
.+.++.+.+.|.+|.++ |..+.++...++.+.-. + ...+.|. ++.|. .|++-..++
T Consensus 95 ~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~---y-~l~i~g~-----------------~~Gyf--~~~e~~~i~ 150 (243)
T PRK03692 95 EALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQ---W-NVNIVGS-----------------QDGYF--TPEQRQALF 150 (243)
T ss_pred HHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHH---h-CCEEEEE-----------------eCCCC--CHHHHHHHH
Confidence 34566777889999999 77777666666655321 0 0001110 01122 255555677
Q ss_pred HHHhhcCCEEEEEcCCCCchh-------HHhhcCeeEEecCchHHH---HhhcchhccCCChhHHHHHHHHHHHH
Q 013242 252 KHLQARNHICGMIGNGVNDAP-------ALKKADIGIAVADATDAA---RSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 252 ~~lq~~g~~v~~iGDg~ND~~-------al~~A~vGIa~~~a~~~a---~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
+.+...+-.++.+|=|.==-+ ..-.+.+.+++|.+-|.. ..-|.-.+..-++.=+.+++.+-|+.
T Consensus 151 ~~I~~s~~dil~VglG~PkQE~~~~~~~~~~~~~v~~gvGg~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~ 225 (243)
T PRK03692 151 ERIHASGAKIVTVAMGSPKQEIFMRDCRLVYPDALYMGVGGTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRI 225 (243)
T ss_pred HHHHhcCCCEEEEECCCcHHHHHHHHHHHhCCCCEEEEeCeEEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHH
Confidence 777777777777777642211 111244555555321111 23345555667888888888887664
No 226
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=32.00 E-value=1.1e+02 Score=29.02 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=45.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHH----------HHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccc
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAIA----------KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 238 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~a----------~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 238 (447)
+-.++-|+.+++.||.| .||+..... ...++++|++.- +-.+.
T Consensus 41 ~~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~I-------------------------EiS~G 93 (237)
T TIGR03849 41 DIVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEAV-------------------------EISDG 93 (237)
T ss_pred HHHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCEE-------------------------EEcCC
Confidence 35888999999999764 588743222 225666676411 11134
Q ss_pred hhccChhhHHHHHHHHhhcCCEEEE
Q 013242 239 FAGVFPEHKYEIVKHLQARNHICGM 263 (447)
Q Consensus 239 ~a~~~p~~K~~iV~~lq~~g~~v~~ 263 (447)
+-.+.+++|.++|+..++.|-+|..
T Consensus 94 ~~~i~~~~~~rlI~~~~~~g~~v~~ 118 (237)
T TIGR03849 94 SMEISLEERCNLIERAKDNGFMVLS 118 (237)
T ss_pred ccCCCHHHHHHHHHHHHhCCCeEec
Confidence 6677888999999999988877653
No 227
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.86 E-value=1.9e+02 Score=28.45 Aligned_cols=64 Identities=14% Similarity=0.241 Sum_probs=40.5
Q ss_pred chhccChhhHHHHHHHHhh--cCCEEEEEcCCCC---chh-HHh------hcCeeEEecCch--HHHHhhcchhccCC
Q 013242 238 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN---DAP-ALK------KADIGIAVADAT--DAARSAADIVLTEP 301 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~--~g~~v~~iGDg~N---D~~-al~------~A~vGIa~~~a~--~~a~~aAD~vl~~~ 301 (447)
.|.=|+|..=.++++.++. .|..|+.+|-+.. -+. ||. .|.|-++..... ...-..||+++..-
T Consensus 137 ~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Av 214 (295)
T PRK14174 137 CFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAI 214 (295)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEec
Confidence 3556778766667766653 4899999999854 222 332 356666665432 33446789998754
No 228
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.80 E-value=2.4e+02 Score=27.61 Aligned_cols=65 Identities=15% Similarity=0.194 Sum_probs=41.1
Q ss_pred cchhccChhhHHHHHHHHhh--cCCEEEEEcCCCCc----hhHHhh------cCeeEEecCchH--HHHhhcchhccCC
Q 013242 237 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK------ADIGIAVADATD--AARSAADIVLTEP 301 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~--~g~~v~~iGDg~ND----~~al~~------A~vGIa~~~a~~--~a~~aAD~vl~~~ 301 (447)
..|.=|+|..=.++++.++- .|..++.+|-+..= +.||.. |.|-++.....+ ..-..||+|+..-
T Consensus 134 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~Av 212 (286)
T PRK14184 134 PGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAI 212 (286)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEec
Confidence 34566788776777776653 48899999987531 234443 566666654332 3346789987653
No 229
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=30.25 E-value=49 Score=27.35 Aligned_cols=28 Identities=21% Similarity=0.103 Sum_probs=23.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA 194 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~ 194 (447)
-.+++.++++.+++.|.+++.+|+....
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 3467999999999999999999998654
No 230
>PRK10527 hypothetical protein; Provisional
Probab=30.10 E-value=77 Score=26.94 Aligned_cols=47 Identities=15% Similarity=0.091 Sum_probs=32.5
Q ss_pred HhHHHHHHHHHHHhhcccccHHHHHHHHHhcccCCcccchhHHHHHHHHHHH
Q 013242 328 IDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQR 379 (447)
Q Consensus 328 ~~~~~~~~~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~ 379 (447)
..|.....+..++++.+.+|-++.-++....|..- ++|...|...++
T Consensus 8 ~lG~~~~~LG~iGi~LPlLPTTPFlLLAa~cfaRs-----SpR~~~WL~~h~ 54 (125)
T PRK10527 8 IIGWLAVVLGTLGVVLPLLPTTPFILLAAWCFARS-----SPRFHAWLLYRS 54 (125)
T ss_pred HHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHcC-----CHHHHHHHHcCc
Confidence 35555666677888899999999999866665543 346666766443
No 231
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=29.77 E-value=3e+02 Score=26.31 Aligned_cols=39 Identities=15% Similarity=0.257 Sum_probs=22.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEE-EEcCCcH-HHHHHHHHHh
Q 013242 165 DPPIHDSAETIRRALSLGLGVK-MITGDQL-AIAKETGRRL 203 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~-miTGd~~-~~a~~ia~~l 203 (447)
|.+-++..+.++.+++.|+..+ +++-... .....+++..
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 3344666777777777777633 5554442 3444555543
No 232
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=29.49 E-value=1.9e+02 Score=27.30 Aligned_cols=110 Identities=12% Similarity=0.017 Sum_probs=69.2
Q ss_pred EEEeccCCCCCCcch--HHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHh
Q 013242 157 FIGLIPLFDPPIHDS--AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~--~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
.=|.+++++ ++||- ++.+-.|++.+ .|+.|.-...-|..+.+.+||.+- ....+..+... . +
T Consensus 90 V~~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDc-Fegii~~e~~n--------p---~- 153 (244)
T KOG3109|consen 90 VHGRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDC-FEGIICFETLN--------P---I- 153 (244)
T ss_pred hhccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHh-ccceeEeeccC--------C---C-
Confidence 357788888 88764 45566666554 899999999999999999999521 11111100000 0 0
Q ss_pred hccchhccChhhHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 235 KADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 235 ~~~v~a~~~p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
+..+.|.-+|+.=....+..+-. .+.+.++-|+.+.+..=+..|..-.
T Consensus 154 ~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tv 202 (244)
T KOG3109|consen 154 EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTV 202 (244)
T ss_pred CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeE
Confidence 11344555554434444444443 6789999999999988888776643
No 233
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=29.19 E-value=92 Score=26.93 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=32.2
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcC
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 190 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTG 190 (447)
.-++++++++.|...+-.+-+.|+++|++|+-+--
T Consensus 17 K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 17 KTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 56999999999999999999999999999998854
No 234
>PRK00208 thiG thiazole synthase; Reviewed
Probab=28.95 E-value=1.4e+02 Score=28.53 Aligned_cols=53 Identities=26% Similarity=0.307 Sum_probs=44.2
Q ss_pred CCCcEEEEeccCCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 152 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 152 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~---Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
+.+|.=+=+++=.+-+-||..++|+.++.. |..|+-++-|++..++.++.- |-
T Consensus 90 ~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~-G~ 145 (250)
T PRK00208 90 GTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA-GC 145 (250)
T ss_pred CCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CC
Confidence 567788888888888999999999999999 999996777888888887764 53
No 235
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.61 E-value=99 Score=23.20 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=34.5
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHhCC
Q 013242 160 LIPLFDPPIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGM 205 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT-Gd~~~~a~~ia~~lGi 205 (447)
++++.++.++.+.+....|++.|+.|.+.. +.+.......|...|+
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~ 52 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGA 52 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCC
Confidence 445566677778888899999999988754 4466667777777776
No 236
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.46 E-value=1.6e+02 Score=28.70 Aligned_cols=54 Identities=11% Similarity=-0.023 Sum_probs=40.7
Q ss_pred CCcEEEEeccCCCCCC---cchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 013242 153 SPWQFIGLIPLFDPPI---HDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 153 ~~~~~lG~i~l~d~~r---~~~~~~I~~l~~~Gi~v~mi-TGd~~~~a~~ia~~lGi~ 206 (447)
-++..++++.+...-. .+..+.++.+++.|+++++. +.-+...+..+++..|+.
T Consensus 196 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~ 253 (286)
T cd01019 196 YGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGAK 253 (286)
T ss_pred cCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCce
Confidence 4567788777654333 34557889999999998777 566788999999999973
No 237
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=28.31 E-value=5.1e+02 Score=26.01 Aligned_cols=84 Identities=19% Similarity=0.289 Sum_probs=60.1
Q ss_pred eccCCCCCCcchHHHHHHHH-hCCCeEEEEcCCc--HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 160 LIPLFDPPIHDSAETIRRAL-SLGLGVKMITGDQ--LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~-~~Gi~v~miTGd~--~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
+.++.|+-|-+...++.+.- ++|+.+.+--..- ...++.+++.+||+.- .+...-
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl----------------------~~anEG 276 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPL----------------------ELANEG 276 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHH----------------------HhhcCc
Confidence 67899999999999997774 5677766655443 3678899999999731 112222
Q ss_pred cchhccChhhHHHHHHHHhhcC-CEEEEEc
Q 013242 237 DGFAGVFPEHKYEIVKHLQARN-HICGMIG 265 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g-~~v~~iG 265 (447)
.+.+-+.|++=.++++.|++.+ .....||
T Consensus 277 ~lv~~V~~~~a~~~l~~L~~~~~~~A~iIG 306 (339)
T COG0309 277 KLVIAVPPEHAEEVLEALRSHGLKDAAIIG 306 (339)
T ss_pred eEEEEECHHHHHHHHHHHHhcCCccceeEE
Confidence 3456777887788889999887 4555555
No 238
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=28.10 E-value=3.3e+02 Score=26.27 Aligned_cols=44 Identities=16% Similarity=0.328 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchh---HHhhcCe-eEEecCch
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAP---ALKKADI-GIAVADAT 287 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~---al~~A~v-GIa~~~a~ 287 (447)
+++-.++++.+++.-..-+++|=|+|+.. .+..++. |+-+|++-
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVGSal 234 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIGSAC 234 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEECHHH
Confidence 34445677777765455567899999554 3333322 56666543
No 239
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=27.89 E-value=62 Score=23.31 Aligned_cols=24 Identities=29% Similarity=0.364 Sum_probs=17.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCc
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQ 192 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~ 192 (447)
|+-++.++.|.++|++|-|.|-+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 567899999999999999998654
No 240
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=27.12 E-value=2.7e+02 Score=27.47 Aligned_cols=39 Identities=21% Similarity=0.150 Sum_probs=33.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 168 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
.+..+++++-+-..|..++++=......+..+++...++
T Consensus 87 gEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vP 125 (305)
T PRK00856 87 GETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVP 125 (305)
T ss_pred CcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCC
Confidence 577888999999998999999888888999999987664
No 241
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=26.85 E-value=2.7e+02 Score=27.74 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=45.8
Q ss_pred CCCCcEEEEeccCCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHH
Q 013242 151 SGSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 202 (447)
Q Consensus 151 ~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~---Gi~v~miTGd~~~~a~~ia~~ 202 (447)
.+.+|.=+=+++=..-+-||..++|+.++.. |..|..++-|++..++.++.-
T Consensus 163 ~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 163 GGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred cCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 4678888888888888999999999999999 999988888999999888764
No 242
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=26.60 E-value=2.5e+02 Score=25.59 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=24.2
Q ss_pred chHHHHHHHHhCCCeEEEEc-------CC------cHHHHHHHHHHhCCC
Q 013242 170 DSAETIRRALSLGLGVKMIT-------GD------QLAIAKETGRRLGMG 206 (447)
Q Consensus 170 ~~~~~I~~l~~~Gi~v~miT-------Gd------~~~~a~~ia~~lGi~ 206 (447)
|+.-++..+++.|++|.-++ +. +...+..+|+.+|++
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip 60 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP 60 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc
Confidence 44556666777777655444 11 456778888888885
No 243
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=26.50 E-value=1.5e+02 Score=28.74 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=41.5
Q ss_pred CCCcEEEEeccCCC---CCCcchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 013242 152 GSPWQFIGLIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 152 e~~~~~lG~i~l~d---~~r~~~~~~I~~l~~~Gi~v~mi-TGd~~~~a~~ia~~lGi~ 206 (447)
.-+++.+|++.+.. |-..+..+.++.+++.|+++++. +.-+...+..+++.+|..
T Consensus 187 ~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~ 245 (282)
T cd01017 187 RYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAK 245 (282)
T ss_pred HCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCc
Confidence 35678888877643 33356677789999999998877 566678889999999874
No 244
>PRK09529 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; Reviewed
Probab=26.26 E-value=2e+02 Score=31.54 Aligned_cols=140 Identities=23% Similarity=0.332 Sum_probs=83.5
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHH
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 248 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~ 248 (447)
+++.+.++.+++.|+-|.+. |+-.+....-..+.|++.-..|. |.+...... -..-.++-+.+|+.+.|-+..
T Consensus 149 e~a~~Ia~Elq~r~~lvfl~-G~l~EQl~e~gvk~G~~~~lvp~----G~~~ts~vH--a~g~AiRaAliFGgv~pGd~~ 221 (711)
T PRK09529 149 EKAKKIIKELQKKNLLTFLC-GEVIEQLIEAGVKLGLDYRLVPL----GDDITSAIH--AANFAIRAALIFGGVEPGDYE 221 (711)
T ss_pred HHHHHHHHHHHHCCcEEEEc-CcHHHHhhhcccccccceeEEec----CCchhhHHH--HHHHHHHHHHHhcCCCCcCHH
Confidence 78888899999999977665 76555555566666665322221 111110000 011223445579999999999
Q ss_pred HHHHHHhhc-CCEEEEEcCCCCchhHHhhc---CeeEEe--cCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 249 EIVKHLQAR-NHICGMIGNGVNDAPALKKA---DIGIAV--ADATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 249 ~iV~~lq~~-g~~v~~iGDg~ND~~al~~A---~vGIa~--~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
++..+..++ +..|.+.| ..+|..+-..| ..||-+ .+.-+.....-+.++.+++.+.+++-=.+.|.+
T Consensus 222 ei~dY~~nRV~AfViA~G-~~s~~~~A~aaGai~~GfPVItd~~~pe~~~~~~~~~~~~~~d~iv~~~le~rgi 294 (711)
T PRK09529 222 ELLDYTKERVPAFVNALG-ELDDEWVAAAAGAINLGFPVITDQDVPEGICVPEWVLSEPDYDKIVQKALEVRGI 294 (711)
T ss_pred HHHHHHHhhccEEEEeec-ccCHHHHHHHhhHHhcCCcEeeCCCCccccccccccccCCCHHHHHHHHHHhcCc
Confidence 999999887 77889999 44554322222 233332 122222223567888888888877655555443
No 245
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=26.16 E-value=36 Score=29.31 Aligned_cols=80 Identities=13% Similarity=0.201 Sum_probs=52.9
Q ss_pred HHHHhhhhhhhhhhcccCCCC-cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eE-EEEcCCc------HHHHH
Q 013242 127 KFAERGLRSLAVAYQEVPEGS-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQ------LAIAK 197 (447)
Q Consensus 127 ~~~~~G~r~l~vA~~~~~~~~-~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v-~miTGd~------~~~a~ 197 (447)
-+..+|++|+.+..+.-+++- ..-.+.+-.++|+-.+.-.-.+..++.++.|++.|. .+ +++-|.- +....
T Consensus 26 ~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~ 105 (137)
T PRK02261 26 ALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVE 105 (137)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHH
Confidence 456788888888764311110 111234557889888888899999999999999966 34 4444433 34555
Q ss_pred HHHHHhCCC
Q 013242 198 ETGRRLGMG 206 (447)
Q Consensus 198 ~ia~~lGi~ 206 (447)
+.++++|++
T Consensus 106 ~~l~~~G~~ 114 (137)
T PRK02261 106 KKFKEMGFD 114 (137)
T ss_pred HHHHHcCCC
Confidence 678888864
No 246
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=26.15 E-value=52 Score=27.32 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=25.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAI 195 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~ 195 (447)
-.+++.++++.+++.|.+++.+|+.....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 45889999999999999999999976543
No 247
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.89 E-value=2e+02 Score=27.96 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=41.2
Q ss_pred CCCcEEEEeccCCCCCC---cchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 013242 152 GSPWQFIGLIPLFDPPI---HDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 152 e~~~~~lG~i~l~d~~r---~~~~~~I~~l~~~Gi~v~mi-TGd~~~~a~~ia~~lGi~ 206 (447)
.-+++.+|++.+...-. .+..+.++.+++.|+++++. .+-+...+..+++.+|+.
T Consensus 193 ~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 193 AYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred HcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 35678888887644333 45567788899999997766 555678889999999984
No 248
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=25.81 E-value=97 Score=28.46 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=24.3
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHH
Q 013242 168 IHDSAETIRRALSLGLGVKMITGDQLAI 195 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miTGd~~~~ 195 (447)
.+++.++++.+|+.|.+++.+||.....
T Consensus 122 s~~v~~a~~~Ak~~G~~vI~IT~~~~s~ 149 (196)
T PRK10886 122 SRDIVKAVEAAVTRDMTIVALTGYDGGE 149 (196)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 5789999999999999999999976543
No 249
>PRK13938 phosphoheptose isomerase; Provisional
Probab=25.47 E-value=50 Score=30.34 Aligned_cols=28 Identities=21% Similarity=0.243 Sum_probs=24.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA 194 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~ 194 (447)
-.+++.++++.+++.|++++.+||....
T Consensus 125 ~t~~vi~a~~~Ak~~G~~vI~iT~~~~s 152 (196)
T PRK13938 125 NSMSVLRAAKTARELGVTVVAMTGESGG 152 (196)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 4578999999999999999999997653
No 250
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=25.38 E-value=1.1e+02 Score=29.16 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=34.2
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
.-..+.|.+|++.|+.|+-++-|.-.+=..+-++|||..
T Consensus 196 ~~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 196 DILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 344667899999999999999999999999999999963
No 251
>PF13541 ChlI: Subunit ChlI of Mg-chelatase
Probab=25.36 E-value=1.6e+02 Score=24.87 Aligned_cols=38 Identities=21% Similarity=0.127 Sum_probs=33.0
Q ss_pred CCCcEEEEeccCCCCCC--cchHHHHHHHHhCCCeEEEEc
Q 013242 152 GSPWQFIGLIPLFDPPI--HDSAETIRRALSLGLGVKMIT 189 (447)
Q Consensus 152 e~~~~~lG~i~l~d~~r--~~~~~~I~~l~~~Gi~v~miT 189 (447)
..++.|+|=+++.-.+| +++...+..+++.|++-+++-
T Consensus 79 ~~~~~~~GEl~L~G~ir~v~~~~~~~~~A~~~G~~~vivP 118 (121)
T PF13541_consen 79 PEDTVFIGELGLDGEIRPVPGILPRIIEAKKLGFKRVIVP 118 (121)
T ss_pred CCCEEEEEEecCCccEEecCcHHHHHHHHHHCCCCEEEeC
Confidence 36789999999999998 588899999999999877764
No 252
>PF12407 Abdominal-A: Homeobox protein ; InterPro: IPR022132 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00046 from PFAM. This family is a homeobox protein involved in differentiation of embryonic cells to form the abdominal region.
Probab=25.30 E-value=54 Score=18.87 Aligned_cols=16 Identities=38% Similarity=0.543 Sum_probs=11.1
Q ss_pred cchhhHHHHh-hhhHHh
Q 013242 401 LSWMAEEARR-RAEIAR 416 (447)
Q Consensus 401 ~~~~~~~~~r-r~~~~~ 416 (447)
..++.||++| |.|-.+
T Consensus 5 vkeineqar~e~~Eqe~ 21 (24)
T PF12407_consen 5 VKEINEQARREREEQEK 21 (24)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 4578899988 655443
No 253
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=25.17 E-value=6.6e+02 Score=27.00 Aligned_cols=79 Identities=15% Similarity=0.192 Sum_probs=54.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcH-HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHH
Q 013242 170 DSAETIRRALSLGLGVKMITGDQL-AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 248 (447)
Q Consensus 170 ~~~~~I~~l~~~Gi~v~miTGd~~-~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~ 248 (447)
|...+|..+++.+-++.+++=.+. ..+..++.-+++.- ..+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-----------------------------~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-----------------------------EQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-----------------------------EEEEecCHHHHH
Confidence 577788888888878888876553 45666777777741 235566777778
Q ss_pred HHHHHHhhcCCEEEEEcCCCCchhHHhhcCe
Q 013242 249 EIVKHLQARNHICGMIGNGVNDAPALKKADI 279 (447)
Q Consensus 249 ~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v 279 (447)
..|+.++++|.. +.+||+.- +.+-++++.
T Consensus 146 ~~v~~lk~~G~~-~vvG~~~~-~~~A~~~g~ 174 (538)
T PRK15424 146 GQINELKANGIE-AVVGAGLI-TDLAEEAGM 174 (538)
T ss_pred HHHHHHHHCCCC-EEEcCchH-HHHHHHhCC
Confidence 889999998865 45688765 333444443
No 254
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.85 E-value=2e+02 Score=28.15 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=40.1
Q ss_pred cchhccChhhHHHHHHHHhh--cCCEEEEEcCCCC-c---hhHHhhcCeeEEe--cCchH--HHHhhcchhccCCC
Q 013242 237 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN-D---APALKKADIGIAV--ADATD--AARSAADIVLTEPG 302 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~--~g~~v~~iGDg~N-D---~~al~~A~vGIa~--~~a~~--~a~~aAD~vl~~~~ 302 (447)
..|.=|+|..=.++++.++- .|..|+.+|-|.. - +.+|...+.-+.+ ....+ ..-..||+|+..-+
T Consensus 135 ~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 135 PLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVG 210 (285)
T ss_pred CCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCC
Confidence 34566777766666666653 4889999999865 2 3355555444433 32222 23467899987544
No 255
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=24.79 E-value=1.3e+02 Score=24.97 Aligned_cols=54 Identities=20% Similarity=0.133 Sum_probs=39.8
Q ss_pred CCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHHHhCCC
Q 013242 153 SPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 153 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v-~miTGd~~~~a~~ia~~lGi~ 206 (447)
.+-.++++-.......+.+++.++.|++.|. ++ +++-|..+..-.+-.++.|++
T Consensus 49 ~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 49 EDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCC
Confidence 3447788877778888999999999999977 44 455555554445667788985
No 256
>PRK10444 UMP phosphatase; Provisional
Probab=24.71 E-value=74 Score=30.29 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeE
Q 013242 249 EIVKHLQARNHICGMIGNGV-NDAPALKKADIGI 281 (447)
Q Consensus 249 ~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGI 281 (447)
.+.+.++.....++||||.. +|+.+-+.+++--
T Consensus 182 ~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~ 215 (248)
T PRK10444 182 AALNKMQAHSEETVIVGDNLRTDILAGFQAGLET 215 (248)
T ss_pred HHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCE
Confidence 34444544567899999997 8999999999864
No 257
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=24.69 E-value=2.7e+02 Score=23.58 Aligned_cols=22 Identities=9% Similarity=-0.066 Sum_probs=14.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcC
Q 013242 169 HDSAETIRRALSLGLGVKMITG 190 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTG 190 (447)
+.....++.|++.|+++....+
T Consensus 52 ~~~~~~~~~L~~~g~~~~~~~~ 73 (149)
T cd06167 52 ERQRGFLDALRRLGFEPIQKPL 73 (149)
T ss_pred hhHHHHHHHHHHCCcEEEEEcc
Confidence 4455666777777777776653
No 258
>PRK15108 biotin synthase; Provisional
Probab=24.48 E-value=7.2e+02 Score=24.86 Aligned_cols=99 Identities=11% Similarity=0.088 Sum_probs=55.7
Q ss_pred EEEEeccCCCC-CC--cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHH
Q 013242 156 QFIGLIPLFDP-PI--HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 232 (447)
Q Consensus 156 ~~lG~i~l~d~-~r--~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (447)
++++..+..+| .+ +...+.++.+++.|+.+.+--|.-......-.+..|++.-.. .+.. . .+.
T Consensus 95 ~i~i~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~---~leT--~---------p~~ 160 (345)
T PRK15108 95 RFCMGAAWKNPHERDMPYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNH---NLDT--S---------PEF 160 (345)
T ss_pred EEEEEecCCCCCcchHHHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEee---cccc--C---------hHh
Confidence 34444443455 33 677788999999999876555655555555566778862100 0000 0 010
Q ss_pred HhhccchhccChhhHHHHHHHHhhcCCEEE---EEcCCCCc
Q 013242 233 IEKADGFAGVFPEHKYEIVKHLQARNHICG---MIGNGVND 270 (447)
Q Consensus 233 ~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~---~iGDg~ND 270 (447)
.. .++..-+.+++.+.++.+++.|..+. ++|=|..+
T Consensus 161 f~--~I~~~~~~~~rl~~i~~a~~~G~~v~sg~i~GlgEt~ 199 (345)
T PRK15108 161 YG--NIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETV 199 (345)
T ss_pred cC--CCCCCCCHHHHHHHHHHHHHcCCceeeEEEEeCCCCH
Confidence 00 12233456778888888888776543 56666554
No 259
>PF08821 CGGC: CGGC domain; InterPro: IPR014925 Proteins in this entry are a quite highly conserved sequence of CGGC in its central region. The region has many conserved cysteines and histidines suggestive of a zinc binding function.
Probab=24.32 E-value=2.5e+02 Score=23.06 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=32.1
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEc
Q 013242 154 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMIT 189 (447)
Q Consensus 154 ~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT 189 (447)
+.+++|++.--.-|-.+...-++++++.|++++-++
T Consensus 37 ~~elvgf~~CgGCpg~~~~~~~~~l~~~~~d~IHls 72 (107)
T PF08821_consen 37 DVELVGFFTCGGCPGRKLVRRIKKLKKNGADVIHLS 72 (107)
T ss_pred CeEEEEEeeCCCCChhHHHHHHHHHHHCCCCEEEEc
Confidence 589999999998889999999999999999877653
No 260
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=24.12 E-value=76 Score=30.90 Aligned_cols=41 Identities=20% Similarity=0.170 Sum_probs=32.4
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHH
Q 013242 154 PWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLA 194 (447)
Q Consensus 154 ~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGd~~~ 194 (447)
++..+--++..|.-+......+..+++.|| .|..+|||.+.
T Consensus 70 g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 70 GIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp T--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred CCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 347788888999888899999999999999 59999999764
No 261
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=23.98 E-value=63 Score=26.74 Aligned_cols=26 Identities=23% Similarity=0.188 Sum_probs=23.1
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHH
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLA 194 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~ 194 (447)
++..+.++.+++.|++++.+|++...
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~ 99 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANS 99 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 67888999999999999999998654
No 262
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=23.61 E-value=1.1e+02 Score=35.28 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=31.0
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 167 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~-Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
+.+++.++++.|.+. +..|+++||+...........+++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 447788889998765 778999999999988877765543
No 263
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=23.57 E-value=1.3e+02 Score=24.58 Aligned_cols=78 Identities=17% Similarity=0.267 Sum_probs=50.0
Q ss_pred HHHhhhhhhhhhhcccCCCCc--CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHHHh
Q 013242 128 FAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGRRL 203 (447)
Q Consensus 128 ~~~~G~r~l~vA~~~~~~~~~--~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v-~miTGd~~~~a~~ia~~l 203 (447)
+...|++|+.+..+ +|.++. .-.+.+..++|+-....+--+.+++.++.+++.+- .+ +++-|-....-...++.+
T Consensus 23 l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~~ 101 (119)
T cd02067 23 LRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKEI 101 (119)
T ss_pred HHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHHc
Confidence 44567766554422 222111 11234557888888877788999999999999986 44 566665554435678888
Q ss_pred CCC
Q 013242 204 GMG 206 (447)
Q Consensus 204 Gi~ 206 (447)
|.+
T Consensus 102 G~D 104 (119)
T cd02067 102 GVD 104 (119)
T ss_pred CCe
Confidence 875
No 264
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=23.20 E-value=2e+02 Score=23.70 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=21.3
Q ss_pred hHHHHHHHHhCCCeEEEEcC-C--c---HH--HHHHHHHHhCCC
Q 013242 171 SAETIRRALSLGLGVKMITG-D--Q---LA--IAKETGRRLGMG 206 (447)
Q Consensus 171 ~~~~I~~l~~~Gi~v~miTG-d--~---~~--~a~~ia~~lGi~ 206 (447)
+.+-|++++++|++.+|.=- | . +. .-...++.+||.
T Consensus 16 ~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~ 59 (110)
T PF04273_consen 16 SPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQ 59 (110)
T ss_dssp -HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-E
T ss_pred CHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCe
Confidence 45678899999999888742 2 1 12 234688899984
No 265
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=22.96 E-value=88 Score=26.92 Aligned_cols=80 Identities=14% Similarity=0.144 Sum_probs=49.0
Q ss_pred HHHHhhhhhhhhhhcccCCCC-cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC--eEEEEcCCc---H---HHHH
Q 013242 127 KFAERGLRSLAVAYQEVPEGS-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQ---L---AIAK 197 (447)
Q Consensus 127 ~~~~~G~r~l~vA~~~~~~~~-~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi--~v~miTGd~---~---~~a~ 197 (447)
-+...|+.|+.+....-+++- ..-.+.+-.++|+=++.-.--+..+++++.|+++|+ .++++=|-. . ....
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 345678888777654422221 011133456788877777777789999999999987 345555531 1 1123
Q ss_pred HHHHHhCCC
Q 013242 198 ETGRRLGMG 206 (447)
Q Consensus 198 ~ia~~lGi~ 206 (447)
.-++++|++
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 457888874
No 266
>PF13604 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL_A 3E1S_A 3GP8_A.
Probab=22.89 E-value=99 Score=28.16 Aligned_cols=92 Identities=14% Similarity=0.090 Sum_probs=40.5
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhh-hhcCChhHHHhhccchhccChhhHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES-IVALPVDELIEKADGFAGVFPEHKYEIVK 252 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~a~~~p~~K~~iV~ 252 (447)
..+.+...|.+|++++--+... ..+.+..|+....+............. .......++ --.+-..-+++.+-..+.+
T Consensus 38 ~~~~~~~~g~~v~~~apT~~Aa-~~L~~~~~~~a~Ti~~~l~~~~~~~~~~~~~~~~~~v-liVDEasmv~~~~~~~ll~ 115 (196)
T PF13604_consen 38 LAEALEAAGKRVIGLAPTNKAA-KELREKTGIEAQTIHSFLYRIPNGDDEGRPELPKKDV-LIVDEASMVDSRQLARLLR 115 (196)
T ss_dssp HHHHHHHTT--EEEEESSHHHH-HHHHHHHTS-EEEHHHHTTEECCEECCSSCC-TSTSE-EEESSGGG-BHHHHHHHHH
T ss_pred HHHHHHhCCCeEEEECCcHHHH-HHHHHhhCcchhhHHHHHhcCCcccccccccCCcccE-EEEecccccCHHHHHHHHH
Confidence 4566778899988888776654 448888886532111000000000000 000000000 0001123445556667777
Q ss_pred HHhhcCCEEEEEcCC
Q 013242 253 HLQARNHICGMIGNG 267 (447)
Q Consensus 253 ~lq~~g~~v~~iGDg 267 (447)
.....+.+++++||.
T Consensus 116 ~~~~~~~klilvGD~ 130 (196)
T PF13604_consen 116 LAKKSGAKLILVGDP 130 (196)
T ss_dssp HS-T-T-EEEEEE-T
T ss_pred HHHhcCCEEEEECCc
Confidence 777778999999995
No 267
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=22.84 E-value=3.2e+02 Score=25.92 Aligned_cols=94 Identities=16% Similarity=0.083 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
..-+|+..+++.-+..|++|.+.|.+....-+-+--..+ ..++.+....|.+.+--
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~------------------------~gdl~~y~~gyfDt~iG 178 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSD------------------------AGDLRKYISGYFDTTIG 178 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccC------------------------cchHHHHhhhhhhcccc
Confidence 566899999999999999999999887654333221111 01112222222222222
Q ss_pred hH------HHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 246 HK------YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 246 ~K------~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
.| ..|-+.+......+++.-|-.+-+.+.+.||+=-.+
T Consensus 179 ~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l 222 (254)
T KOG2630|consen 179 LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGL 222 (254)
T ss_pred ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceee
Confidence 22 345566666678899999999999999999875444
No 268
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=22.66 E-value=62 Score=30.33 Aligned_cols=46 Identities=24% Similarity=0.370 Sum_probs=33.5
Q ss_pred hHHHHHHHHhhc-CCEEEEEcC----CCCchhHHhhc-CeeEEecCchHHHH
Q 013242 246 HKYEIVKHLQAR-NHICGMIGN----GVNDAPALKKA-DIGIAVADATDAAR 291 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGD----g~ND~~al~~A-~vGIa~~~a~~~a~ 291 (447)
+|...++.|... -..+.++|| |-||-|.+... -+|++|.+..|..+
T Consensus 162 DKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~ 213 (220)
T PF03332_consen 162 DKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIK 213 (220)
T ss_dssp SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHH
T ss_pred cHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHH
Confidence 566667777664 468999999 88999999876 56999977655544
No 269
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=22.65 E-value=93 Score=26.92 Aligned_cols=38 Identities=13% Similarity=-0.061 Sum_probs=31.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
+||++.+.++.|.+ .+.++|.|......|..+.+.+.-
T Consensus 37 ~RP~l~~FL~~l~~-~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 37 LRPGLDEFLEELSK-HYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp E-TTHHHHHHHHHH-HCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred eCchHHHHHHHHHH-hceEEEEEeehhhhhhHHHHhhhh
Confidence 49999999999955 499999999999999999999885
No 270
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=22.41 E-value=3.8e+02 Score=24.90 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=25.5
Q ss_pred chHHHHHHHHhCCCeEE-EEc------------CCcHHHHHHHHHHhCCC
Q 013242 170 DSAETIRRALSLGLGVK-MIT------------GDQLAIAKETGRRLGMG 206 (447)
Q Consensus 170 ~~~~~I~~l~~~Gi~v~-miT------------Gd~~~~a~~ia~~lGi~ 206 (447)
|+.-++..+++.|+.|. ++| +.....+..+|+.+|++
T Consensus 9 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip 58 (218)
T TIGR03679 9 DSNYALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIP 58 (218)
T ss_pred HHHHHHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCC
Confidence 44556677777888763 434 33567888999999985
No 271
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=22.34 E-value=1.5e+02 Score=26.29 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=33.9
Q ss_pred CcchHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHhCCC
Q 013242 168 IHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi-~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
-|+-.+-.++|+..|| .|+.+|.+++....+-++.+|-.
T Consensus 64 vPGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~ 103 (171)
T KOG0541|consen 64 VPGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGAN 103 (171)
T ss_pred CchHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCcc
Confidence 3677788899999999 57888999999999999999864
No 272
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=22.20 E-value=1.7e+02 Score=27.69 Aligned_cols=37 Identities=22% Similarity=0.359 Sum_probs=19.7
Q ss_pred HHHHHHHhhcCCEEEEEcCCCCc---hhHHhhcCeeEEec
Q 013242 248 YEIVKHLQARNHICGMIGNGVND---APALKKADIGIAVA 284 (447)
Q Consensus 248 ~~iV~~lq~~g~~v~~iGDg~ND---~~al~~A~vGIa~~ 284 (447)
.+.++.+++....-+++|=|+|+ +..+..+-=|+.+|
T Consensus 176 ~~~i~~lr~~~~~pI~vggGI~~~e~~~~~~~~ADgvVvG 215 (242)
T cd04724 176 KELIKRIRKYTDLPIAVGFGISTPEQAAEVAKYADGVIVG 215 (242)
T ss_pred HHHHHHHHhcCCCcEEEEccCCCHHHHHHHHccCCEEEEC
Confidence 35555565544455677888884 44443332245554
No 273
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=22.07 E-value=86 Score=25.79 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=28.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 200 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia 200 (447)
...-..+..+.++.+++.|.+|+.+|+.........+
T Consensus 62 ~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~a 98 (131)
T PF01380_consen 62 YSGETRELIELLRFAKERGAPVILITSNSESPLARLA 98 (131)
T ss_dssp SSSTTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHHS
T ss_pred ccccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhhC
Confidence 4556688999999999999999999987655444333
No 274
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=21.95 E-value=2.8e+02 Score=24.86 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=27.7
Q ss_pred cchHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHhC
Q 013242 169 HDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLG 204 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miT-Gd~~~~a~~ia~~lG 204 (447)
.+..++.+.+++.||+|.++. |.....-+.+|+.-|
T Consensus 123 ~~~~~~~~~l~~~~I~v~~IgiG~~~~~L~~ia~~tg 159 (183)
T cd01453 123 GNIYETIDKLKKENIRVSVIGLSAEMHICKEICKATN 159 (183)
T ss_pred hhHHHHHHHHHHcCcEEEEEEechHHHHHHHHHHHhC
Confidence 355678999999999987776 766667777887766
No 275
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.63 E-value=79 Score=24.50 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=26.9
Q ss_pred EeccCCCCC-CcchHHHHHHHHhCCCeEEEEcCCcH
Q 013242 159 GLIPLFDPP-IHDSAETIRRALSLGLGVKMITGDQL 193 (447)
Q Consensus 159 G~i~l~d~~-r~~~~~~I~~l~~~Gi~v~miTGd~~ 193 (447)
..+.++-+= +....+.++.|+++|+++...|.+..
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~~ 77 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDDEL 77 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCHH
Confidence 345556555 77889999999999999988776643
No 276
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.32 E-value=71 Score=28.42 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=27.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 200 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia 200 (447)
-.+++.++++.+++.|++|+.+|+.........+
T Consensus 84 ~t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~~a 117 (179)
T TIGR03127 84 ETESLVTVAKKAKEIGATVAAITTNPESTLGKLA 117 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCchHHhC
Confidence 4578889999999999999999997765444443
No 277
>COG2832 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.99 E-value=1.6e+02 Score=24.72 Aligned_cols=48 Identities=15% Similarity=0.108 Sum_probs=32.4
Q ss_pred HHHHhHHHHHHHHHHHhhcccccHHHHHHHHHhcccCCcccchhHHHHHHHHH
Q 013242 325 VRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHA 377 (447)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~w~~~ 377 (447)
+|.+.|+.+..+-.++++.+.+|-++.-++....|...+. |...|...
T Consensus 5 i~i~iGfl~l~LGIiGifLPlLPTTPFlLLaa~cFaRsSp-----Rf~~WLl~ 52 (119)
T COG2832 5 IYIILGFLSLALGIIGIFLPLLPTTPFLLLAAACFARSSP-----RFHAWLLR 52 (119)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCCcHHHHHHHHHHHcCCc-----HHHHHHHc
Confidence 4455666666677788888999999998886666654433 45555543
No 278
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.87 E-value=1.1e+02 Score=23.74 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=32.9
Q ss_pred EeccCCC---CCCcchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 013242 159 GLIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d---~~r~~~~~~I~~l~~~Gi~v~mi-TGd~~~~a~~ia~~lGi~ 206 (447)
.++++.+ ...+.+.+....|+++|++|.+- .+++...-...|...|+.
T Consensus 5 ~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~~~~~l~k~i~~a~~~g~~ 56 (94)
T cd00861 5 VIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDRNERPGVKFADADLIGIP 56 (94)
T ss_pred EEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCCcccchhHHHhcCCC
Confidence 4455544 34556667778889999999884 456666666777777774
No 279
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=20.63 E-value=67 Score=28.59 Aligned_cols=29 Identities=14% Similarity=0.127 Sum_probs=24.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAI 195 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~ 195 (447)
--+++.++++.+++.|++++.+|+.....
T Consensus 113 ~t~~~i~~~~~ak~~Ga~vI~IT~~~~s~ 141 (177)
T cd05006 113 NSPNVLKALEAAKERGMKTIALTGRDGGK 141 (177)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence 45789999999999999999999875433
No 280
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=20.56 E-value=1.6e+02 Score=22.52 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=33.7
Q ss_pred eccCCC---CCCcchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 013242 160 LIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 160 ~i~l~d---~~r~~~~~~I~~l~~~Gi~v~mi-TGd~~~~a~~ia~~lGi~ 206 (447)
++++.+ ...+.+.+..+.|++.|+.+.+- ++.+.......|...|+.
T Consensus 6 ii~~~~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~~~~~~k~~~~a~~~g~~ 56 (94)
T cd00738 6 IVPLTDPRVEAREYAQKLLNALLANGIRVLYDDRERKIGKKFREADLRGVP 56 (94)
T ss_pred EEECCCCcHHHHHHHHHHHHHHHHCCCEEEecCCCcCHhHHHHHHHhCCCC
Confidence 344555 45566677788999999998884 466777777778878763
No 281
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.52 E-value=1e+02 Score=23.26 Aligned_cols=22 Identities=27% Similarity=0.305 Sum_probs=20.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEc
Q 013242 168 IHDSAETIRRALSLGLGVKMIT 189 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miT 189 (447)
.+++.++++.+++.|.+++.+|
T Consensus 60 t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 60 TEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CHHHHHHHHHHHHcCCeEEEEe
Confidence 5789999999999999999999
No 282
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=20.33 E-value=2.7e+02 Score=28.30 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=31.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc-----HHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQ-----LAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~-----~~~a~~ia~~lGi~ 206 (447)
...+....+..+++.||+|+.=+|-- ...+.+++++.|+.
T Consensus 56 ~~~~L~~~L~~~~~~gIkvI~NaGg~np~~~a~~v~eia~e~Gl~ 100 (362)
T PF07287_consen 56 FVRDLRPLLPAAAEKGIKVITNAGGLNPAGCADIVREIARELGLS 100 (362)
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHhcCCC
Confidence 45578889999999999999988754 24556788888885
Done!