Citrus Sinensis ID: 013245


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------
MVKEMRFDSNPLSLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNFESQQTQIHVEEANTGPPVPSAPPIKPISADFHPNETHISSNQEKCDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLLDTTSLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDGING
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHcccEEEEEEccccHHHHHHHHHHHccccccEEEEEEcccccEEEEEEEccEEEEEEEccccccccccccccccccccEEEEcccccHHHHHccccccEEEEcccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccc
cccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccHHcccccccccEEEEcccccccccccHHHHHHHHcccEEEEEcccHcHHHHHHHHHHHHHccccccEEEEccccEEEEEEccccEEEEEEEccEEEEcccccccccccccEEEEEEcccHHHHHHHcccccEEEEEccEEEEcccEEccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEHHHHHHcccccccccccccccccccccccccccEEEcccccccHHHHHHHHHHHHHccc
mvkemrfdsnplslyknkhnHVFVKFAVSFVLLGLAFRLFvsdsirfssvnfesqqtqihveeantgppvpsappikpisadfhpnethissnqekcdlftgewipdpsgpiysnvtcHAIEghqncmrngrpdsgylywrwnprdcelprfnperFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHdeeyrskrwqfpsynftlsvvwtpfllkaevfedingvssSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYhenntvkgchycpgknltelGFDYAYRKALQLVLSFVTRLDQKAFVFLRtttpdhfengewfsggtcnrsvpfkegevemrdidcTMRDIELEEfgkatgigaekgvtlklldttslsllrpdghpgpyrqfqpfakdknakvqndclhwclpgpidsWNDLLMEMMVDGING
mvkemrfdsnplslyknkhNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNFESQQTQIHVEEANTGPPVPSAPPIKPISADFHPNETHISSNQEKCDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEyrskrwqfpsyNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPdhfengewfsggtcnRSVPFKEGEVEMRDIDCTMRDIELEEfgkatgigaekgvTLKLLDTTSLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDGING
MVKEMRFDSNPLSLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNFESQQTQIHVEEANTGppvpsappikpisaDFHPNETHISSNQEKCDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVtlklldttslsllRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDGING
************SLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNF*******************************************KCDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLLDTTSLSLLR*******YRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMV*****
*******************NHVFVKFAVSFVLLGLAFRLFVSDSIRF**************************************************DLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLLDTTSLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDG***
MVKEMRFDSNPLSLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNFESQQTQIHVEEANTGPPVPSAPPIKPISADFHPNETHISSNQEKCDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLLDTTSLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDGING
**KEMRFDSNPLSLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIR************************************************EKCDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLLDTTSLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDGI**
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVKEMRFDSNPLSLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNFESQQTQIHVEEANTGPPVPSAPPIKPISADFHPNETHISSNQEKCDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLLDTTSLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDGING
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
359489711450 PREDICTED: uncharacterized protein LOC10 0.988 0.982 0.734 0.0
224064192441 predicted protein [Populus trichocarpa] 0.977 0.990 0.729 0.0
224127878442 predicted protein [Populus trichocarpa] 0.977 0.988 0.730 0.0
297745405420 unnamed protein product [Vitis vinifera] 0.921 0.980 0.742 0.0
255586547457 conserved hypothetical protein [Ricinus 0.986 0.964 0.697 0.0
147782919486 hypothetical protein VITISV_044114 [Viti 0.984 0.905 0.698 0.0
356560422439 PREDICTED: uncharacterized protein LOC10 0.975 0.993 0.682 1e-170
356571226441 PREDICTED: uncharacterized protein LOC10 0.946 0.959 0.644 1e-166
255537733462 conserved hypothetical protein [Ricinus 0.957 0.926 0.584 1e-160
224072162462 predicted protein [Populus trichocarpa] 0.955 0.924 0.587 1e-159
>gi|359489711|ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/452 (73%), Positives = 377/452 (83%), Gaps = 10/452 (2%)

Query: 1   MVKEMRFDSNPLSLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNF------ES 54
           MV+EMRF+ NP SL++  HNH FVK A+ FVL+GLA RL+ SDSIRFSS         E 
Sbjct: 1   MVQEMRFEMNPFSLHQ--HNHTFVKCALCFVLMGLAVRLWFSDSIRFSSAVDSVETPPEG 58

Query: 55  QQTQIHVEEANTGPPVPSAPPIKPISADFHPNETHISS-NQEKCDLFTGEWIPDPSGPIY 113
           +   +  EE        S P   P+S DF  N+   S  +  KCD+FTG+WIPDPSGP+Y
Sbjct: 59  KTESLAPEEQKAESLEDSLPIQTPVSVDFPGNDNQTSQKDSAKCDIFTGDWIPDPSGPVY 118

Query: 114 SNVTCHAIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSI 173
           +N +CHAIE HQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFL+ MRNK WAFIGDSI
Sbjct: 119 TNESCHAIENHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLDLMRNKSWAFIGDSI 178

Query: 174 SRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDING 233
           SRNHVQSLLCILSQVE+AVEVYHDEEYRSKRW FPS+NFTLSV+WTPFL++A++FEDING
Sbjct: 179 SRNHVQSLLCILSQVEEAVEVYHDEEYRSKRWHFPSHNFTLSVIWTPFLIEADIFEDING 238

Query: 234 VSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKNLTE 293
           VSSS++ L+LD+LD  WTEQYK+FDYVVIAGGKWFLKTAIY+ N+TV GCHYCPG+NLTE
Sbjct: 239 VSSSDVMLHLDKLDKNWTEQYKSFDYVVIAGGKWFLKTAIYYVNDTVMGCHYCPGRNLTE 298

Query: 294 LGFDYAYRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEGEVE 353
           LGF++AYRKALQ++L+FVT  D K FVFLRTTTPDHFENGEWFSGGTC R VPFKEGE++
Sbjct: 299 LGFEFAYRKALQMILNFVTGSDHKGFVFLRTTTPDHFENGEWFSGGTCKRMVPFKEGEID 358

Query: 354 MRDIDCTMRDIELEEFGKATG-IGAEKGVTLKLLDTTSLSLLRPDGHPGPYRQFQPFAKD 412
           MRDID  MRDIELEEF K     G E+GV LKLLDTT LSLLRPDGHPGPYRQF PFA+D
Sbjct: 359 MRDIDRIMRDIELEEFEKVVADAGTERGVILKLLDTTHLSLLRPDGHPGPYRQFHPFAED 418

Query: 413 KNAKVQNDCLHWCLPGPIDSWNDLLMEMMVDG 444
           KNA VQNDCLHWCLPGPIDSWNDL+MEM+V+G
Sbjct: 419 KNATVQNDCLHWCLPGPIDSWNDLVMEMLVNG 450




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064192|ref|XP_002301401.1| predicted protein [Populus trichocarpa] gi|222843127|gb|EEE80674.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224127878|ref|XP_002320186.1| predicted protein [Populus trichocarpa] gi|222860959|gb|EEE98501.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297745405|emb|CBI40485.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255586547|ref|XP_002533910.1| conserved hypothetical protein [Ricinus communis] gi|223526131|gb|EEF28475.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|147782919|emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356560422|ref|XP_003548491.1| PREDICTED: uncharacterized protein LOC100794524 [Glycine max] Back     alignment and taxonomy information
>gi|356571226|ref|XP_003553780.1| PREDICTED: uncharacterized protein LOC100795653 [Glycine max] Back     alignment and taxonomy information
>gi|255537733|ref|XP_002509933.1| conserved hypothetical protein [Ricinus communis] gi|223549832|gb|EEF51320.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224072162|ref|XP_002303634.1| predicted protein [Populus trichocarpa] gi|222841066|gb|EEE78613.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
TAIR|locus:2035342456 TBL25 "AT1G01430" [Arabidopsis 0.968 0.949 0.563 2.2e-137
TAIR|locus:2125048442 TBL26 "AT4G01080" [Arabidopsis 0.771 0.780 0.616 8.7e-132
TAIR|locus:2136113432 TBL23 "AT4G11090" [Arabidopsis 0.944 0.976 0.504 9.2e-123
TAIR|locus:2128489430 TBL24 "AT4G23790" [Arabidopsis 0.939 0.976 0.504 2.9e-119
TAIR|locus:2146062526 TBL21 "AT5G15890" [Arabidopsis 0.776 0.659 0.460 8.3e-90
TAIR|locus:2146077426 TBL19 "AT5G15900" [Arabidopsis 0.776 0.814 0.423 1e-82
TAIR|locus:2020628416 TBL27 "TRICHOME BIREFRINGENCE- 0.885 0.951 0.394 1.2e-81
TAIR|locus:2091388414 TBL22 "AT3G28150" [Arabidopsis 0.758 0.818 0.383 2e-72
TAIR|locus:2076909373 TBL20 "AT3G02440" [Arabidopsis 0.565 0.678 0.441 1.3e-61
TAIR|locus:2153077501 YLS7 "AT5G51640" [Arabidopsis 0.785 0.700 0.336 1.4e-60
TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1345 (478.5 bits), Expect = 2.2e-137, P = 2.2e-137
 Identities = 253/449 (56%), Positives = 313/449 (69%)

Query:     3 KEMRFDSNPLSLYKNKHNHVFVKFAVSFVLLGLAFRLFVSDSIRFSSVNFESQQTQIHVE 62
             K ++ +  P     ++ N +F+K    F+L+GLA+R  +++S         S    +  +
Sbjct:     9 KSIKIEGTPFGS-SHQRNQIFLKSVAFFLLIGLAYRFLITNSTVSPVPTVRSSPESLPPD 67

Query:    63 EANTGXXXXXXXXXXXXXXDFHPNETHISSNQ--EKCDLFTGEWIPDPSGPIYSNVTCHA 120
              +                 D   N T I+S     KCD+F G W+PDPSGPIY+NV+C  
Sbjct:    68 PSGL-----TAITQTSASVDSPANITTIASQNVSTKCDIFIGNWVPDPSGPIYTNVSCRH 122

Query:   121 IEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQS 180
             I+ +QNC++NGRPD  YL WRW PRDC+LPRFNPE+FL+ MRNKW AFIGDSISRNHVQS
Sbjct:   123 IQDYQNCLKNGRPDVNYLRWRWQPRDCDLPRFNPEQFLDNMRNKWLAFIGDSISRNHVQS 182

Query:   181 LLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIR 240
             LLCILSQVE+  +++HD+EY+S+ W+FPSYNFTLSV+W+PFL+KAE FE  NGV  S+IR
Sbjct:   183 LLCILSQVEEVEDIFHDKEYKSRIWRFPSYNFTLSVIWSPFLVKAETFE--NGVPFSDIR 240

Query:   241 LYLDELDTKWTEQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYCPGKN-LTELGFDYA 299
             ++LD+LD KWT+QY NFDYVVI+GGKWFLKT I+HENNTV GCHYC GKN +TELG+ Y+
Sbjct:   241 VHLDKLDQKWTDQYINFDYVVISGGKWFLKTTIFHENNTVTGCHYCQGKNNMTELGYLYS 300

Query:   300 YRKALQLVLSFVTRLDQKAFVFLRTTTPDHFENGEWFSGGTCNRSVPFKEG-EVEMRDID 358
             YRK L LVL FV   + KA V  RTTTPDHFENGEW SGG CNR++PF EG E EM+  D
Sbjct:   301 YRKVLHLVLDFVAEPNHKAQVLFRTTTPDHFENGEWDSGGFCNRTMPFTEGSEGEMKSED 360

Query:   359 CTMRDIELEEFGKATGIGAE-KGVXXXXXXXXXXXXXRPDGHPGPYRQFQPFAKDKNAK- 416
              +MRDIELEEF K T    E                 RPDGHPGPYR   PFA  KN + 
Sbjct:   361 VSMRDIELEEFYKTTTTQQEGSNSNIVLLDTTSMSLLRPDGHPGPYRYPNPFAGLKNKEL 420

Query:   417 --VQNDCLHWCLPGPIDSWNDLLMEMMVD 443
               VQNDCLHWCLPGPIDSWNDL++E+M++
Sbjct:   421 NQVQNDCLHWCLPGPIDSWNDLMVEVMLN 449




GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076909 TBL20 "AT3G02440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-100
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 1e-42
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 3e-26
>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
 Score =  300 bits (770), Expect = e-100
 Identities = 111/295 (37%), Positives = 155/295 (52%), Gaps = 27/295 (9%)

Query: 149 LPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFP 208
           LPRF+ ++FL  +R K   F+GDS+SRN  +SL+C+LSQVE       + + R  R++F 
Sbjct: 1   LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60

Query: 209 SYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQYKNFDYVVIAGGKWF 268
            YN T+   W+PFL+      + +     +  L LD +D KW++ +   D +V   G W+
Sbjct: 61  DYNVTIEFYWSPFLV------ESDNAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHWW 114

Query: 269 LKTAIYHENNTVKGCHYCPGKNLTELGFDYAYRKALQLVLSFV--TRLDQKAFVFLRTTT 326
           L   +Y       G  YC   N  E+GF  AYRKAL+    +V       K  VF RT +
Sbjct: 115 LHRKVYI------GWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFS 168

Query: 327 PDHFENGEWFSGGTCNRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLL 386
           P HFE GEW +GG+C  + P      E + +   M DI  E   +     A     +KLL
Sbjct: 169 PVHFEGGEWNTGGSCYETEPLL--GSEYKGLTPEMIDIVNEVLSR-----AAMKTPVKLL 221

Query: 387 DTTSLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMM 441
           D T LS  R DGHP  YR+  P  K+       DCLHWCLPG  D+WN+LL+ ++
Sbjct: 222 DITLLSQYRKDGHPSVYRKPGPPKKE------QDCLHWCLPGVPDTWNELLLALL 270


The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 447
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.94
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 97.6
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=1.8e-116  Score=899.17  Aligned_cols=327  Identities=32%  Similarity=0.610  Sum_probs=285.3

Q ss_pred             CCCCCCCccCceecCCCCCCcCCCCCC-CccCCcccccCCCCCCCCceeeecCCCCCCCCCChHHHHHHhcCCeEEEEec
Q 013245           93 NQEKCDLFTGEWIPDPSGPIYSNVTCH-AIEGHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGD  171 (447)
Q Consensus        93 ~~~~CD~f~G~WV~D~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~Yl~WRWqP~~C~Lprfd~~~fLe~lRgKrl~FVGD  171 (447)
                      +.++||+|+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+||++|||||||||||
T Consensus        49 ~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGD  128 (387)
T PLN02629         49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGD  128 (387)
T ss_pred             CccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEecc
Confidence            467899999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHhhhccccceeeeeccccceeeEEeecCCEEEEEEEcccccccccccccCCCCcceeEEEeccccchhh
Q 013245          172 SISRNHVQSLLCILSQVEQAVEVYHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWT  251 (447)
Q Consensus       172 Sl~Rnq~~SLlCLL~~v~~~~~v~~~~~~~~~~~~f~~yn~TV~f~WsPFLV~~~~~~~~~g~~~~~~~L~LD~~d~~wa  251 (447)
                      ||+|||||||+|||+++++...+....+.+.++|+|++||+||+||||||||+.+..   .+    ...|+||+++. ++
T Consensus       129 SL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~---~~----~~~l~LD~id~-~a  200 (387)
T PLN02629        129 SLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAV---QG----KRVLKLEEISG-NA  200 (387)
T ss_pred             ccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecC---CC----ceeEEecCcch-hh
Confidence            999999999999999987655444445567889999999999999999999997632   22    34699999875 69


Q ss_pred             hhcCCCcEEEEeceeeeeecceeccCCeeeccccC--CCCccccccHHHHHHHHHHHHHHHHh--ccCCccEEEEeecCC
Q 013245          252 EQYKNFDYVVIAGGKWFLKTAIYHENNTVKGCHYC--PGKNLTELGFDYAYRKALQLVLSFVT--RLDQKAFVFLRTTTP  327 (447)
Q Consensus       252 ~~~~~~DvLVfNtGhWw~r~~~y~e~g~~~g~~~~--~~~~~~~~~~~~Ayr~al~t~~~~v~--~~~~k~~vffRT~SP  327 (447)
                      +.|+++|||||||||||.+++      .+.||+++  .+.++++|++.+|||+||+||++||+  +++.+++|||||+||
T Consensus       201 ~~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP  274 (387)
T PLN02629        201 NAWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISP  274 (387)
T ss_pred             hhhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCc
Confidence            999999999999999999864      44666655  44468899999999999999999997  778899999999999


Q ss_pred             CCcCCCCCCCCC-----CC-CCcccCCCCcccccccchhhhhhhHHHHhhhhcccccccceeEEEeccccccCCCCCCCC
Q 013245          328 DHFENGEWFSGG-----TC-NRSVPFKEGEVEMRDIDCTMRDIELEEFGKATGIGAEKGVTLKLLDTTSLSLLRPDGHPG  401 (447)
Q Consensus       328 ~Hf~~g~W~~GG-----~C-~~T~P~~~~~~~~~~~~~~m~~i~~ee~~~a~~~~~~~~~~v~lLDIT~lS~~R~DgHps  401 (447)
                      +||+||+||+||     +| ++|+|+.++++ .++...+|+  ++|++.      +.++++|+|||||+||++|||||||
T Consensus       275 ~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--~ve~v~------~~~~~~v~lLDIT~ls~lR~DgHPs  345 (387)
T PLN02629        275 THYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--VVDEVI------RGMHNPAYLLDITLLSELRKDGHPS  345 (387)
T ss_pred             ccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--HHHHHH------HhcCCceEEEechhhhhcCCCCCcc
Confidence            999999999875     68 79999986554 344555554  344443      2356799999999999999999999


Q ss_pred             CCCCCCcccccCCCCCCCCceecccCCchhHHHHHHHHHHh
Q 013245          402 PYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMV  442 (447)
Q Consensus       402 ~y~~~~~~~~~~~~~~~~DClHWCLPGvpDtWNelL~~~L~  442 (447)
                      +|++..+.++.+++..++||+||||||||||||||||++|+
T Consensus       346 ~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~  386 (387)
T PLN02629        346 IYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF  386 (387)
T ss_pred             cccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence            99876566677778889999999999999999999999986



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 66/456 (14%), Positives = 121/456 (26%), Gaps = 148/456 (32%)

Query: 82  DFHPNETH------ISSNQEK-CDLFTGEWIPDPSGPIYSNVTCHAIEGHQNCMRNGRPD 134
           DF   E        +S  ++   D F  + + D    I S      I   ++ +      
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL-- 65

Query: 135 SGYLYWRWNPRDCELPRFNPERFLNFMRNKWWAFIGDSISRNHVQSLLCILSQVEQAVEV 194
              L+W              ++F+  +    + F+   I     Q      S + +    
Sbjct: 66  --RLFWTL----LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP-----SMMTRMYIE 114

Query: 195 YHDEEYRSKRWQFPSYNFTLSVVWTPFLLKAEVFEDINGVSSSEIRLYLDELDTKWTEQY 254
             D  Y   +  F  YN     V                    ++R  L EL        
Sbjct: 115 QRDRLYNDNQ-VFAKYN-----VSRLQPYL-------------KLRQALLEL-------- 147

Query: 255 KNFDYVVIAG----GKWFL--------KTAIYHENN----TVKGCHYCPGKNLTELGFDY 298
           +    V+I G    GK ++        K     +       +K C+  P   L  L    
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN-SPETVLEML---- 202

Query: 299 AYRKAL--QLVLSFVTRLDQKAFVFLRTTTP--------------------DHFENGE-W 335
              + L  Q+  ++ +R D  + + LR  +                      + +N + W
Sbjct: 203 ---QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259

Query: 336 --FSGG------TCNRSV-----PFKEGEVEMRDIDCTMRDIELEE-FGKATG------- 374
             F+        T  + V           + +     T+   E++    K          
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 375 -------------IGAE-----------KGVTLKLLDTT---SLSLLRPDGHPGPYRQFQ 407
                        I              K V    L T    SL++L P  +   + +  
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 408 PFAKDKNAKVQNDCLHWCLPGPIDSWNDLLMEMMVD 443
            F    +       L W      D      + ++V+
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSD------VMVVVN 409


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query447
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 82.79
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 81.23
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=82.79  E-value=0.21  Score=41.82  Aligned_cols=15  Identities=40%  Similarity=0.492  Sum_probs=12.7

Q ss_pred             hcCCeEEEEecchhH
Q 013245          161 MRNKWWAFIGDSISR  175 (447)
Q Consensus       161 lRgKrl~FVGDSl~R  175 (447)
                      +..|||+|+|||++-
T Consensus         2 ~~~kri~~iGDSit~   16 (207)
T d3dc7a1           2 VSFKRPAWLGDSITA   16 (207)
T ss_dssp             BCCSSEEEEESTTTS
T ss_pred             CCCCEEEEEehHhhc
Confidence            357999999999984



>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure