Query 013257
Match_columns 447
No_of_seqs 152 out of 1108
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 07:10:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vat_A Dnpep, aspartyl aminope 100.0 3E-101 1E-105 807.0 34.4 435 6-446 59-496 (496)
2 4eme_A M18 aspartyl aminopepti 100.0 9.6E-97 3E-101 779.6 31.7 434 6-446 30-570 (571)
3 2glf_A Probable M18-family ami 100.0 1E-95 4E-100 762.3 31.8 399 5-436 39-450 (450)
4 2ijz_A Probable M18-family ami 100.0 2.6E-93 8.9E-98 741.4 3.0 396 7-435 26-424 (428)
5 2glj_A Probable M18-family ami 100.0 1E-89 3.5E-94 720.0 21.8 403 4-434 42-460 (461)
6 1y7e_A Probable M18-family ami 100.0 3.2E-87 1.1E-91 700.6 18.8 400 6-434 42-457 (458)
7 2vpu_A TET3, 354AA long hypoth 100.0 9.5E-68 3.3E-72 538.3 23.6 328 3-438 15-349 (354)
8 3isx_A Endoglucanase; TM1050, 100.0 3.2E-67 1.1E-71 531.9 21.0 320 3-434 17-342 (343)
9 3kl9_A PEPA, glutamyl aminopep 100.0 1E-66 3.5E-71 531.0 23.5 332 4-438 10-346 (355)
10 1y0y_A FRV operon protein FRVX 100.0 1E-48 3.6E-53 397.0 24.6 332 3-438 12-350 (353)
11 1vhe_A Aminopeptidase/glucanas 100.0 2.3E-47 8E-52 390.2 25.2 337 3-438 13-354 (373)
12 1ylo_A Hypothetical protein SF 100.0 2.1E-47 7.1E-52 385.5 21.0 324 3-437 9-337 (348)
13 1vho_A Endoglucanase; structur 100.0 3.5E-47 1.2E-51 384.1 20.5 320 3-438 11-336 (346)
14 2gre_A Deblocking aminopeptida 100.0 1.2E-46 4.2E-51 381.5 23.3 323 3-435 12-344 (349)
15 2wyr_A Cobalt-activated peptid 100.0 3.4E-45 1.2E-49 367.8 23.4 320 3-436 8-332 (332)
16 2fvg_A Endoglucanase; TM1049, 100.0 8.2E-45 2.8E-49 366.6 20.2 326 3-438 4-335 (340)
17 3cpx_A Aminopeptidase, M42 fam 100.0 5.7E-43 2E-47 351.3 15.2 287 3-436 23-321 (321)
18 2wzn_A TET3, 354AA long hypoth 100.0 1.4E-28 4.8E-33 239.7 24.6 332 3-442 15-353 (354)
19 4h2k_A Succinyl-diaminopimelat 99.7 9.5E-17 3.3E-21 156.4 8.6 174 224-438 92-268 (269)
20 3t68_A Succinyl-diaminopimelat 99.6 1.1E-15 3.9E-20 148.6 8.4 171 225-436 93-266 (268)
21 1rtq_A Bacterial leucyl aminop 99.3 1.9E-12 6.5E-17 127.9 8.2 168 227-439 110-289 (299)
22 1tkj_A Aminopeptidase, SGAP; d 99.3 8.9E-12 3E-16 122.3 10.4 160 231-438 94-277 (284)
23 1fno_A Peptidase T; metallo pe 99.1 1.9E-10 6.4E-15 118.1 8.2 80 354-439 328-407 (417)
24 2ek8_A Aminopeptidase; metallo 98.9 1E-08 3.5E-13 105.9 14.3 161 231-439 237-402 (421)
25 3gb0_A Peptidase T; NP_980509. 98.9 8.6E-09 3E-13 103.9 11.4 77 354-436 295-371 (373)
26 3rza_A Tripeptidase; phosphory 98.8 9.9E-09 3.4E-13 104.6 11.0 78 355-438 316-393 (396)
27 3isz_A Succinyl-diaminopimelat 98.5 8.6E-07 2.9E-11 88.8 13.0 79 353-437 296-375 (377)
28 1cg2_A Carboxypeptidase G2; me 98.4 2.7E-07 9.4E-12 93.7 5.4 77 356-438 312-391 (393)
29 3ife_A Peptidase T; metallopep 98.2 4.6E-06 1.6E-10 86.0 11.3 80 353-438 353-432 (434)
30 3iib_A Peptidase M28; YP_92679 98.2 1.3E-06 4.4E-11 90.9 6.6 164 231-442 266-436 (444)
31 3pfo_A Putative acetylornithin 98.1 5.7E-06 2E-10 84.8 9.1 80 355-439 350-430 (433)
32 3tx8_A Succinyl-diaminopimelat 98.1 9.1E-06 3.1E-10 81.5 10.1 50 384-434 318-368 (369)
33 3tc8_A Leucine aminopeptidase; 98.1 5.6E-06 1.9E-10 82.2 8.3 159 227-434 120-307 (309)
34 2qyv_A XAA-His dipeptidase; YP 97.9 7.6E-05 2.6E-09 77.9 13.6 78 355-437 406-485 (487)
35 3mru_A Aminoacyl-histidine dip 97.9 8.8E-05 3E-09 77.8 13.8 80 354-438 407-488 (490)
36 1vgy_A Succinyl-diaminopimelat 97.8 2.7E-05 9.3E-10 78.9 6.4 79 355-439 301-380 (393)
37 3gux_A Putative Zn-dependent e 97.4 0.00033 1.1E-08 69.5 8.9 158 227-433 122-310 (314)
38 1q7l_B Aminoacylase-1; catalys 97.4 0.00055 1.9E-08 54.7 7.7 76 358-439 3-81 (88)
39 4fai_A CG5976, isoform B; alph 97.0 0.00069 2.4E-08 67.5 6.1 48 231-278 126-173 (330)
40 3n5f_A L-carbamoylase, N-carba 96.8 0.001 3.4E-08 67.7 5.6 78 353-437 327-406 (408)
41 4fuu_A Leucine aminopeptidase; 96.8 0.0086 3E-07 58.8 11.7 173 230-433 123-305 (309)
42 4f9u_A CG32412; alpha/beta hyd 96.8 0.0022 7.4E-08 63.1 7.2 48 230-277 99-148 (312)
43 3pb6_X Glutaminyl-peptide cycl 96.8 0.0021 7E-08 64.3 7.1 172 230-436 130-327 (330)
44 1q7l_A Aminoacylase-1; catalys 96.7 0.0028 9.5E-08 58.2 6.8 56 225-283 103-160 (198)
45 1z2l_A Allantoate amidohydrola 96.7 0.0042 1.5E-07 63.2 8.8 80 353-439 331-412 (423)
46 2afw_A Glutaminyl-peptide cycl 96.4 0.0052 1.8E-07 61.0 7.6 53 228-280 121-186 (329)
47 3fed_A Glutamate carboxypeptid 95.7 0.011 3.7E-07 64.8 6.3 54 231-284 341-394 (707)
48 3kas_A Transferrin receptor pr 95.4 0.005 1.7E-07 66.8 2.0 144 231-419 295-455 (640)
49 2v8h_A Beta-alanine synthase; 95.2 0.033 1.1E-06 57.8 7.6 80 353-439 365-448 (474)
50 3ct9_A Acetylornithine deacety 93.4 0.088 3E-06 52.2 5.8 52 226-282 96-149 (356)
51 2zog_A Cytosolic non-specific 93.1 0.064 2.2E-06 55.3 4.4 79 355-438 394-476 (479)
52 2pok_A Peptidase, M20/M25/M40 92.7 0.091 3.1E-06 54.3 4.9 77 355-436 400-480 (481)
53 2pok_A Peptidase, M20/M25/M40 91.5 0.12 4E-06 53.5 4.0 60 3-64 50-119 (481)
54 3rza_A Tripeptidase; phosphory 91.3 0.086 2.9E-06 53.0 2.7 76 3-80 30-119 (396)
55 2f7v_A Aectylcitrulline deacet 91.1 0.14 4.6E-06 51.0 3.8 73 356-435 293-367 (369)
56 3khx_A Putative dipeptidase sa 90.9 0.2 6.8E-06 52.2 5.1 54 223-279 126-180 (492)
57 3pfe_A Succinyl-diaminopimelat 90.3 0.52 1.8E-05 48.6 7.5 79 355-438 387-470 (472)
58 3pfe_A Succinyl-diaminopimelat 90.0 0.18 6.1E-06 52.1 3.7 52 225-280 120-172 (472)
59 3khx_A Putative dipeptidase sa 90.0 0.12 4.3E-06 53.7 2.5 76 355-438 412-490 (492)
60 2f7v_A Aectylcitrulline deacet 89.7 0.28 9.5E-06 48.7 4.8 45 227-281 98-144 (369)
61 3gb0_A Peptidase T; NP_980509. 89.5 0.13 4.6E-06 50.9 2.2 59 3-63 12-82 (373)
62 1q7l_A Aminoacylase-1; catalys 89.3 0.13 4.5E-06 46.8 1.8 61 3-65 16-86 (198)
63 3isz_A Succinyl-diaminopimelat 89.1 0.11 3.8E-06 51.3 1.3 58 3-65 9-73 (377)
64 2rb7_A Peptidase, M20/M25/M40 88.7 0.16 5.4E-06 50.5 2.1 54 384-438 306-360 (364)
65 3n5f_A L-carbamoylase, N-carba 88.4 0.13 4.5E-06 51.8 1.3 50 13-65 31-85 (408)
66 1ysj_A Protein YXEP; M20 famil 88.3 0.26 9.1E-06 49.6 3.5 77 354-438 320-401 (404)
67 2zog_A Cytosolic non-specific 88.0 0.48 1.6E-05 48.6 5.3 26 36-64 83-108 (479)
68 1lfw_A PEPV; hydrolase, dipept 87.9 0.32 1.1E-05 49.9 3.8 74 355-438 388-466 (470)
69 3k9t_A Putative peptidase; str 87.8 2 6.9E-05 44.0 9.6 155 231-436 193-353 (435)
70 2rb7_A Peptidase, M20/M25/M40 87.3 0.17 5.8E-06 50.3 1.3 60 3-65 12-79 (364)
71 3dlj_A Beta-Ala-His dipeptidas 87.2 0.44 1.5E-05 49.3 4.4 46 394-439 437-484 (485)
72 1xmb_A IAA-amino acid hydrolas 85.9 0.58 2E-05 47.3 4.4 80 354-438 316-403 (418)
73 3dlj_A Beta-Ala-His dipeptidas 83.5 1.1 3.8E-05 46.2 5.4 25 37-64 91-115 (485)
74 1lfw_A PEPV; hydrolase, dipept 83.0 0.73 2.5E-05 47.1 3.7 13 52-64 80-92 (470)
75 3mru_A Aminoacyl-histidine dip 81.4 0.65 2.2E-05 48.2 2.6 63 3-66 20-87 (490)
76 1fno_A Peptidase T; metallo pe 81.3 0.47 1.6E-05 47.8 1.5 50 226-280 127-181 (417)
77 3tx8_A Succinyl-diaminopimelat 80.7 0.45 1.6E-05 47.0 1.1 59 3-65 19-83 (369)
78 3ram_A HMRA protein; two-domai 80.6 1.5 5.3E-05 43.9 5.0 76 354-436 286-372 (394)
79 1tkj_A Aminopeptidase, SGAP; d 80.5 0.24 8.3E-06 47.6 -1.0 27 36-65 65-91 (284)
80 1xmb_A IAA-amino acid hydrolas 80.2 0.89 3E-05 45.9 3.1 57 3-63 34-95 (418)
81 2qyv_A XAA-His dipeptidase; YP 78.0 0.84 2.9E-05 47.1 2.1 62 3-65 17-83 (487)
82 3ct9_A Acetylornithine deacety 77.3 1.3 4.3E-05 43.8 3.1 67 355-436 287-354 (356)
83 3ram_A HMRA protein; two-domai 76.6 1.3 4.5E-05 44.4 3.1 59 3-64 22-87 (394)
84 3pfo_A Putative acetylornithin 75.5 1.2 4.2E-05 44.8 2.5 59 3-64 32-116 (433)
85 1ysj_A Protein YXEP; M20 famil 69.7 1.5 5E-05 44.1 1.4 59 3-64 38-102 (404)
86 1vgy_A Succinyl-diaminopimelat 69.6 1.9 6.7E-05 42.8 2.3 57 3-64 12-75 (393)
87 3io1_A Aminobenzoyl-glutamate 67.7 3.7 0.00013 41.8 4.0 84 353-438 343-433 (445)
88 4fuu_A Leucine aminopeptidase; 66.3 4.1 0.00014 39.5 3.8 26 36-65 83-108 (309)
89 4h2k_A Succinyl-diaminopimelat 64.8 3.3 0.00011 39.1 2.7 57 3-64 12-75 (269)
90 3tc8_A Leucine aminopeptidase; 63.1 4.8 0.00016 39.2 3.6 26 36-65 83-108 (309)
91 3gux_A Putative Zn-dependent e 62.2 5.1 0.00017 39.2 3.6 26 36-65 85-110 (314)
92 4f9u_A CG32412; alpha/beta hyd 60.3 5.4 0.00019 38.5 3.4 49 388-438 246-299 (312)
93 1z2l_A Allantoate amidohydrola 60.1 2.1 7.3E-05 42.9 0.5 35 28-65 55-89 (423)
94 3pb6_X Glutaminyl-peptide cycl 59.2 4.3 0.00015 40.1 2.5 26 36-65 97-122 (330)
95 3ife_A Peptidase T; metallopep 57.1 3.7 0.00013 41.5 1.7 51 225-279 152-207 (434)
96 3t68_A Succinyl-diaminopimelat 56.7 2.2 7.5E-05 40.3 -0.1 57 3-64 12-75 (268)
97 1rtq_A Bacterial leucyl aminop 56.7 5.3 0.00018 38.3 2.7 27 36-64 76-102 (299)
98 1cg2_A Carboxypeptidase G2; me 53.5 5.6 0.00019 39.4 2.3 44 233-279 118-161 (393)
99 2afw_A Glutaminyl-peptide cycl 52.6 6.3 0.00021 38.5 2.4 48 387-436 274-326 (329)
100 4fai_A CG5976, isoform B; alph 51.8 9.6 0.00033 37.3 3.6 47 389-437 272-323 (330)
101 2ek8_A Aminopeptidase; metallo 49.0 13 0.00044 37.5 4.2 30 36-65 204-234 (421)
102 3io1_A Aminobenzoyl-glutamate 46.5 9.5 0.00033 38.7 2.7 27 36-65 97-123 (445)
103 3iib_A Peptidase M28; YP_92679 44.4 10 0.00036 38.6 2.6 29 35-65 235-263 (444)
104 2v8h_A Beta-alanine synthase; 43.9 9 0.00031 39.2 2.1 50 231-283 121-175 (474)
105 3kas_A Transferrin receptor pr 32.8 20 0.00069 38.5 2.7 28 35-64 266-293 (640)
106 3fed_A Glutamate carboxypeptid 29.5 25 0.00085 38.3 2.7 27 36-64 313-339 (707)
107 2vt1_B Surface presentation of 24.4 84 0.0029 25.1 4.3 22 355-376 25-46 (93)
No 1
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=100.00 E-value=3.4e-101 Score=807.04 Aligned_cols=435 Identities=51% Similarity=0.849 Sum_probs=384.1
Q ss_pred hhhhcCCCcc-eeccccceEEee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCeeEEe
Q 013257 6 VCKQWGINRF-QREKIGNWKLAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVG 82 (447)
Q Consensus 6 ~~~~~~~sG~-E~~~~~~w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~~~l~ 82 (447)
+.+.+...|| |+++++.|.++| +||+.|++++||||.+|+++++++|+.||+||+|+|||+|||+|.++++||++|+
T Consensus 59 ~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDSP~lklKp~p~~~~~g~~~l~ 138 (496)
T 3vat_A 59 CRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQQVG 138 (496)
T ss_dssp HHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCCCEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccCCCccccCCccccCCCeeEEc
Confidence 3444455888 889999999888 8999998778999999988777789999999999999999999999999999999
Q ss_pred EEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceeeeEecc
Q 013257 83 VQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATS 162 (447)
Q Consensus 83 v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~idiG~~ 162 (447)
|++|||++|+||+||+|++||||.++++++| ++.+|||++++|+.+||+|||||+++.+ +++++|+|+||.|++|..
T Consensus 139 ve~YGG~l~~tW~DR~L~laGrV~vk~~~~g--~~~~~Lv~~~~Pi~~IP~LaiHl~r~~n-~~~~~n~q~~l~pi~g~~ 215 (496)
T 3vat_A 139 VETYGGGIWSTWFDRDLTLAGRVIVKCPTSG--RLEQRLVHVDRPILRIPHLAIHLQRNVN-ENFGPNMEMHLVPILATS 215 (496)
T ss_dssp EEEESSCCGGGGTTCCEEEEEEEEEECTTTC--CEEEEEEECCSCCBBCCCCCGGGSTTTT-TCCCCCTTTTTCCEEEEH
T ss_pred cEeCCCchhceecCCchhcceEEEEEecCCC--eEEEEEEeCCCCeEECCccccccCcchh-cccCcCcccccccEEEec
Confidence 9999999999999999999999999952156 6899999999999999999999999877 578899999999999986
Q ss_pred chhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhhHHHH
Q 013257 163 LKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCS 242 (447)
Q Consensus 163 s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g~~~~ 242 (447)
..++++.+. +++++......+|+..|++++++++||++||+++||+++++.+|++++|++++||.|+|||||+|||++
T Consensus 216 ~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~la~~~gv~~~Div~~dl~l~d~~~~~~~Gl~~e~I~s~~lDnr~~~~~~ 293 (496)
T 3vat_A 216 IQEELEKGT--PEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQPAVLGGAYEEFIFAPRLDNLHSCFCA 293 (496)
T ss_dssp HHHHHHCC-------------CCSCHHHHHHHHHHHTCCGGGEEEEEEEEEECSCCEEETTTTCEEEETTHHHHHHHHHH
T ss_pred ccccccccc--ccccccccccccccHHHHHHHHHHcCCCcCceEEEEEEEEecCcceEeccCCceEEeeccccHHHHHHH
Confidence 432211110 000011112567889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEecCCCC
Q 013257 243 LKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHAL 322 (447)
Q Consensus 243 leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~Dv~ha~ 322 (447)
+++|+++.+.+..+.+.....++++||||||||+||+||++.|+||+|+||..+ +.+.+.+.|++++|++||+|||||.
T Consensus 294 leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~-~~~~~~~~~~l~~S~~IS~DvahA~ 372 (496)
T 3vat_A 294 LQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISAS-PQHLTAFEEAIPKSYMISADMAHAV 372 (496)
T ss_dssp HHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCC-SSCTTHHHHHGGGCEEEEECCEECC
T ss_pred HHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhc-cCchHHHHHHhhcCeEEEEeCCCCC
Confidence 999998752000000013456799999999999999999999999999999977 4478899999999999999999999
Q ss_pred CCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEE
Q 013257 323 HPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVD 402 (447)
Q Consensus 323 ~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~d 402 (447)
||||+++++++|.+.||+||+||++++++|++|+.+.++++++|+++|||||.++.|+|++||||+|+|++++.||||++
T Consensus 373 dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvd 452 (496)
T 3vat_A 373 HPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLD 452 (496)
T ss_dssp BTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEE
T ss_pred CCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEEecCCCCCcchHHHHHhcccCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred echhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhhhhcccccC
Q 013257 403 VGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVD 446 (447)
Q Consensus 403 igiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~~~~~~~~~ 446 (447)
||||+||||||+||++++|++++++|+++|++++.+++.++.||
T Consensus 453 IGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~~~~~~~~~~~~ 496 (496)
T 3vat_A 453 LGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD 496 (496)
T ss_dssp EECEEESTTSSSEEEESHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred ecHhhhccccHHHHhhHHHHHHHHHHHHHHHHhHHHHhhhhcCC
Confidence 99999999999999999999999999999999999999887664
No 2
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.6e-97 Score=779.65 Aligned_cols=434 Identities=33% Similarity=0.600 Sum_probs=375.6
Q ss_pred hhhhcCCCcc-eeccccceEEee--eEEEEccCCeEEEEEeCCcccCCCC-eEEEEeecCCCceEeecCccccCCCeeEE
Q 013257 6 VCKQWGINRF-QREKIGNWKLAR--DTFFTRNHSTIIAFAVGKKYVAGNG-FHVVGAHTDSPCLKLKPVSKVTKGGYLEV 81 (447)
Q Consensus 6 ~~~~~~~sG~-E~~~~~~w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~-~vmi~AH~De~g~~Vk~~~~i~~~G~~~l 81 (447)
+.+.|...|| |+++++.|.++| +||+.|++++||||.+|+++++++| +.||+||+|+|||+|||+|.+++.||++|
T Consensus 30 ~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP~lklKP~p~~~~~g~~~l 109 (571)
T 4eme_A 30 LKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSCALKISPNNNVIKKKIHQI 109 (571)
T ss_dssp HHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCCEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCCcccccCCccccCCCeeEE
Confidence 3445556889 889999999988 9999999899999999998777788 99999999999999999999999999999
Q ss_pred eEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCC----CCccceee
Q 013257 82 GVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKV----NTQSHLVP 157 (447)
Q Consensus 82 ~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~----~~~~~l~i 157 (447)
+|++|||++|+||+||+|+|||||.++. +| ++++|||++++|+.+||+|||||++. +++++ |+|++|.|
T Consensus 110 ~ve~YGG~l~~tW~DRdLslaGrV~vk~--~g--~~~~~LV~~~~Pi~~IP~LAiHL~r~---~~~~~~~~~N~q~~l~P 182 (571)
T 4eme_A 110 NVECYGSGLWHTWFDRSLGLSGQVLYKK--GN--KLVEKLIQINKSVLFLPSLAIHLQNR---TRYDFSVKINYENHIKP 182 (571)
T ss_dssp EEEEESSCCGGGGTTCCEEEEEEEEEEE--TT--EEEEEEEEEEEEEEBCCCCCGGGSCC-------CCCCCCTTTTCCC
T ss_pred eeEecCCchhccccCCcceeeeEEEEec--CC--cEEEEEecCCCCeEEcCccccccCcc---cccccccccccccccce
Confidence 9999999999999999999999999985 57 68999999999999999999999883 34566 99999999
Q ss_pred eEeccchhhhcc-------------------------ccCCCC------C-----------------Cccccccccch--
Q 013257 158 ILATSLKEELNK-------------------------VVTDSP------N-----------------ERTDTYSSKHH-- 187 (447)
Q Consensus 158 diG~~s~e~~~~-------------------------~~~~~~------~-----------------~~~~~~~~~~~-- 187 (447)
++|....++++. ...++. + +...+...+|+
T Consensus 183 i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 262 (571)
T 4eme_A 183 IISTTLFNQLNKCKRNNVHHDTILTTDTKFSHKENSQNKRDDQMCHSFNDKDVSNHNLDKNTIEHLTNQQNEEKNKHTKD 262 (571)
T ss_dssp EEEEHHHHHHHHHC------------------------------------------------------------------
T ss_pred eEeecchhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhcccccc
Confidence 999853221110 000000 0 00112334555
Q ss_pred ----------------hHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhhHHHHHHHHHhccC
Q 013257 188 ----------------SHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTS 251 (447)
Q Consensus 188 ----------------~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g~~~~leal~~~~~ 251 (447)
..|++++++++||.+.||++||++++|.||++++|++++||+|+|||||+|||++++||+++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~ll~lla~~~gi~~edIl~~EL~l~d~q~a~~~Gl~~efI~s~RlDnl~~~~~al~All~~~~ 342 (571)
T 4eme_A 263 NPNSKDIVEHINTDNSYPLLYLLSKELNCKEEDILDFELCLMDTQEPCFTGVYEEFIEGARFDNLLGSFCVFEGFIELVN 342 (571)
T ss_dssp ----------CCTTSCHHHHHHHHHHHTSCGGGEEEEEEEEEECSCCEEESTTSCEEEETTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCHHHeeeceEEEecCCCcceecCCcceeeccCcccHHHHHHHHHHHHhccc
Confidence 8899999999999999999999999999999999999999999999999999999999987632
Q ss_pred CCC------------CCCCCC------ceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCC---------ChHHH
Q 013257 252 SEG------------DLEDEI------GVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCS---------NSKLI 304 (447)
Q Consensus 252 ~~~------------~~~~~~------~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~---------~~~~~ 304 (447)
... .+.+.. .+.++++||+|||||.|++||.|.|++++|+||...++. +.+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~lfD~EEIGS~s~qGA~S~fl~~~l~RI~~~~g~~~~~~~~~~~~~~~ 422 (571)
T 4eme_A 343 SIKNHTSNENTNHTNNITNDINDNIHNNLYISIGYDHEEIGSLSEVGARSYCTKNFIDRIISSVFKKEIHEKNLSVQEIY 422 (571)
T ss_dssp HHTTC----------------CCCGGGCEEEEEEESCGGGTSCSTTSTTSTHHHHHHHHHHHHHTHHHHHTSCCCHHHHH
T ss_pred cccccccccccccccccccccccccccceeEEEEecccccCCCCCCCcCChHHHHHHHHHHHhhCcccccccccccHHHH
Confidence 000 000011 467899999999999999999999999999999998874 26789
Q ss_pred HHhhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhC------CCCEEEEEe
Q 013257 305 EKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKH------NLPVQDFVV 378 (447)
Q Consensus 305 ~~~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~------~Ip~Q~~~~ 378 (447)
.|++++|++||+|||||.||||+++++++|.+.||+||+|+++++++|++|+.+.++|+++|+++ +||||.++.
T Consensus 423 ~~~la~S~~ISaDvahA~dPny~~~~d~~~~~~LG~GpvIk~~~~~~y~tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~ 502 (571)
T 4eme_A 423 GNLVNRSFILNVDMAHCSHPNYPETVQDNHQLFFHEGIAIKYNTNKNYVTSPLHASLIKRTFELYYNKYKQQIKYQNFMV 502 (571)
T ss_dssp HHHHTTCEEEEECCEECCCTTCGGGSCTTSCCCTTSCEEEECCTTSSSCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_pred HHHHHhCeEEEEECCCCcCCCCcccccccCCcccCcCceEEEeCCCCcccCHHHHHHHHHHHHhcccccCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred ecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhhhhcccccC
Q 013257 379 RNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVD 446 (447)
Q Consensus 379 r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~~~~~~~~~ 446 (447)
|+|++||||+|+|+.++.||||++||||+||||||+||+++.|++++++|+++|+++|.+++.++.+|
T Consensus 503 rnD~~gGgTig~i~~s~~GIpTvdIGiP~ryMHS~~E~~~~~Dv~~~vkLl~aFl~~~~~~~~~~~~~ 570 (571)
T 4eme_A 503 KNDTPCGSTVGSMVAANLSMPGIDIGIPQLAMHSIREIAAVHDVFFLIKGVFAFYTYYNQVLSTCVHD 570 (571)
T ss_dssp CSSSCCCCCSHHHHHHHHTCCEEEEECEEESTTSSSEEEEHHHHHHHHHHHHHHHHHHHHHHHTEECC
T ss_pred cCCCCCcchHHHHHHhCCCCcEEEechhhhccchHHHHhhHHHHHHHHHHHHHHHHhHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888776
No 3
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=100.00 E-value=1e-95 Score=762.27 Aligned_cols=399 Identities=22% Similarity=0.340 Sum_probs=359.5
Q ss_pred chhhhcCCCcc-eeccccceEEee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCeeEE
Q 013257 5 GVCKQWGINRF-QREKIGNWKLAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEV 81 (447)
Q Consensus 5 ~~~~~~~~sG~-E~~~~~~w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~~~l 81 (447)
++.+.+...|| |+++++. ++| +||+++++||||||++|+. ++++++||+||||||||+|||+|.|+++||++|
T Consensus 39 ~~~~~l~~~Gf~~l~e~~~--l~~g~k~~~~r~~~~lia~~~g~~--~~~g~~ii~AH~Dsp~l~Vk~~~~i~~~G~~~l 114 (450)
T 2glf_A 39 EIKRILDESGFVPLEDFAG--DPMNMTVYAVNRGKAIAAFRVVDD--LKRGLNLVVAHIDSPRLDFKPNPLIEDEQIALF 114 (450)
T ss_dssp HHHHHHHTTTCEETTSCCS--CTTSBCEEEESSSSCEEEEEBCSC--GGGCCEEEEEECCCCEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHCcCEEcccccC--CCCCCEEEEEcCCCEEEEEEeCCC--CCCCeEEEEEecccCCeEEecCCeecCCCEEEE
Confidence 34455556888 7888876 777 9999998789999998863 235789999999999999999999999999999
Q ss_pred eEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeee--eeCCCeEEecCCCcccccccccCCCCCCCccceeeeE
Q 013257 82 GVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLV--RIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPIL 159 (447)
Q Consensus 82 ~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv--~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~idi 159 (447)
+|++|||++|++|+||+|+++|||.+++ | +....+| ++++|+++||++||||+++.+ +..++++++||+||+
T Consensus 115 ~v~~yGG~~~~~w~dr~L~laGrV~v~~---g--~~~~~~ig~~~~~pi~~Ip~laiHl~~~~~-~~~~~~~~~~l~~~i 188 (450)
T 2glf_A 115 KTHYYGGIKKYHWLSIPLEIHGVLFKND---G--TEIEIHIGDKPEDPVFTIPDLLPHLDKEDA-KISEKFKGENLMLIA 188 (450)
T ss_dssp EEEEESSCCSGGGSSSCEEEEEEEECTT---S--CEEEEEESSSSSSCBBCCCCCCGGGCCCCC-BTTTTSCGGGCEEEE
T ss_pred EeEeeCCcchhhccCcccceeeEEEEeC---C--CeeEeeecccCCCceEEeccCccccccccc-ccccCCchhcceEEE
Confidence 9999999999999999999999999974 3 3444444 678999999999999998754 456789999999999
Q ss_pred eccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhhH
Q 013257 160 ATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMS 239 (447)
Q Consensus 160 G~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g~ 239 (447)
|+.+.+ .+ + ..+|+..+++++|+++||++||+++||++++++|+++.+|+++++|+|+|||||+||
T Consensus 189 G~~~~~---------~~-~----~~~~~~~ll~~la~~~gv~~~div~~dl~~~~~~~~~~~Gl~~~~i~~~~lDnr~~~ 254 (450)
T 2glf_A 189 GTIPLS---------GE-E----KEAVKTNVLKILNEMYGITEEDFVSGEIEVVPAFSPREVGMDRSLIGAYGQDDRICA 254 (450)
T ss_dssp ECCCCT---------TC-C----SSHHHHHHHHHHHHHHCCCGGGGTTEEEEEEECCCCEEESTTCCEEEETTHHHHHHH
T ss_pred ecCCCc---------cc-c----hhhhHHHHHHHHHHHcCCCcccEEEEEEEEEecccceecccCCcEEEEecchhhHHH
Confidence 997521 00 0 146888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCC--ChHHHHHhhhcceEEEEe
Q 013257 240 FCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCS--NSKLIEKAIQRSFLVSAD 317 (447)
Q Consensus 240 ~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~--~~~~~~~~~~~s~aIs~D 317 (447)
|+++++|+++ + .+.+.++++||||||||+|++||++.|+||+|+||..+++. +++.+.++++||++||+|
T Consensus 255 ~~~l~al~~~-~-------~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l~~s~~iS~D 326 (450)
T 2glf_A 255 YTALRALLSA-N-------PEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVLENTSVISGD 326 (450)
T ss_dssp HHHHHHHHHC-C-------CSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHHHSCEEEEEC
T ss_pred HHHHHHHHhc-C-------CCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhhcCCeEEEEe
Confidence 9999999987 3 24578999999999999999999999999999999999986 788999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCccCCccEEEE--cCCCccc---cCHHHHHHHHHHHHhCCCCEEEEEe-ecCCCCCCChHHH
Q 013257 318 MAHALHPNYMDKHEDNHQPKLHGGLVIKH--NANQRYA---TNAVTSFVFREVASKHNLPVQDFVV-RNDMACGSTIGPI 391 (447)
Q Consensus 318 v~ha~~P~~~~~~~~~~~~~LG~Gp~ik~--~~~~~~~---t~~~~~~~l~~~a~~~~Ip~Q~~~~-r~d~~~G~T~g~i 391 (447)
|+||.||||+++|+++|.+.||+||+||+ +++++|+ +|+.+.++++++|+++|||||.++. |+|++||||+|+|
T Consensus 327 vahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~Q~~~~gr~d~~gGstig~i 406 (450)
T 2glf_A 327 VCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIWQVATLGKVDQGGGGTIAKF 406 (450)
T ss_dssp CEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCEEECCSSSTTSCCCCCTHHH
T ss_pred cccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCEEEEEeccCCCCCCCcHHHH
Confidence 99999999999999889999999999996 4788887 5999999999999999999999998 9999999999999
Q ss_pred HhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHh
Q 013257 392 LASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEF 436 (447)
Q Consensus 392 ~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~ 436 (447)
+ ++.||||+|||+|+||||||+||++++|++++++|+++|++++
T Consensus 407 ~-a~~Gi~tvdiGiP~l~MHS~~E~~~~~D~~~~~~l~~af~~~l 450 (450)
T 2glf_A 407 F-AERGSDVIDMGPALLGMHSPFEISSKADLFETYVAYRSLMEKL 450 (450)
T ss_dssp H-HTTTSCEEEEECEEBSTTSSSEEEEHHHHHHHHHHHHHHHHHC
T ss_pred H-hCCCCcEEEechhhcccchHHHHhhHHHHHHHHHHHHHHHHhC
Confidence 9 8999999999999999999999999999999999999999864
No 4
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.6e-93 Score=741.44 Aligned_cols=396 Identities=43% Similarity=0.745 Sum_probs=327.4
Q ss_pred hhhcCCCcc-eeccccceEEee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCeeEEeE
Q 013257 7 CKQWGINRF-QREKIGNWKLAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGV 83 (447)
Q Consensus 7 ~~~~~~sG~-E~~~~~~w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~~~l~v 83 (447)
.+.+...|| |+++++.|+++| +||+++++||||||++|++++++++++|++|||||||||||++|.|+++||++|+|
T Consensus 26 ~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dspgl~Vk~~~~i~~~G~l~~~v 105 (428)
T 2ijz_A 26 ARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSPCLRVKPNPEIARNGFLQLGV 105 (428)
T ss_dssp HHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCSEEEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcCCeEEecCCcccCCCEEEEee
Confidence 344445788 899999999999 99999987899999988764445678999999999999999999999999999999
Q ss_pred EEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceeeeEeccc
Q 013257 84 QTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSL 163 (447)
Q Consensus 84 ~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~idiG~~s 163 (447)
++|||++|+||+||+|.++|||.+++. | ++..+++++++|+|+||++||||+++.+ ++++++++++|+||+|+.+
T Consensus 106 ~~yGG~~~~~W~dr~l~lagrV~v~~~--~--~~~~~l~~~~~~~~~I~~laiHl~~~~~-~~~~~~~~~~l~~~ig~~~ 180 (428)
T 2ijz_A 106 EVYGGALFAPWFDRDLSLAGRVTFRAN--G--KLESRLVDFRKAIAVIPNLNIHLNRAAN-EGWPINAQNELPPIIAQLA 180 (428)
T ss_dssp EEESCCCSTTSSSCCEEEEEEEETTTE--E--EEECCSCCCBCCCCCSSCCC------------CCCCSTTSCCEEECCC
T ss_pred EECCCeecccccCcccccCcEEEEECC--C--eeeeeccccCCceEEEeCCCcccCchhh-cccCCCccCceEEEEecCC
Confidence 999999999999999999999999763 3 4778899999999999999999998765 4578999999999999875
Q ss_pred hhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhhHHHHH
Q 013257 164 KEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSL 243 (447)
Q Consensus 164 ~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g~~~~l 243 (447)
.++ ..++++.+++++++++||++||+++||+++++.++++.+|++++||.|++||||+|||+++
T Consensus 181 ~~~----------------~~~~~~~~~~~~a~~~GI~~gD~v~~dL~~~~~~~~~~~G~~~~~I~s~~lDdr~~~~~~l 244 (428)
T 2ijz_A 181 PGE----------------AADFRLLLDEQLLREHGITADVVLDYELSFYDTQSAAVVGLNDEFIAGARLDNLLSCHAGL 244 (428)
T ss_dssp SCC----------------------------------CCCCCCCSCCTTCEEECCSCCCCCSSSSSCCCSSCSSTTTTTT
T ss_pred ccc----------------ccchhhHHHHHHHHHcCCCccceEEEEeeecCCCceEEeccCCCeEEeecCccHHHHHHHH
Confidence 210 1234556778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEecCCCCC
Q 013257 244 KALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALH 323 (447)
Q Consensus 244 eal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~Dv~ha~~ 323 (447)
++|++++. .... ++++||||||||+|++||++.|+|++|+||..+ .+.+.+++++|++||+||+||.|
T Consensus 245 ~al~~~~~-------~~~~-v~~~fd~EEVGs~ga~gA~s~~~~~~l~ri~~~----~~~~~~~~~~s~~is~Dv~ha~~ 312 (428)
T 2ijz_A 245 EALLNAEG-------DENC-ILVCTDHEEVGSCSHCGADGPFLEQVLRRLLPE----GDAFSRAIQRSLLVSADNAHGVH 312 (428)
T ss_dssp THHHHTTS-------CSSS-CEEEECBSCTTTTCHHHHSSCCTTTSCCSSSSS----SSSSTTTTTSCCEEEECCCCCCC
T ss_pred HHHHhccc-------CCce-EEEEEeccccCccchhhhhccccHHHHHHhhhh----hhHHHhhhhcCEEEEEecccccC
Confidence 99998741 1233 355559999999999999999999999999865 56788999999999999999999
Q ss_pred CCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEe
Q 013257 324 PNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDV 403 (447)
Q Consensus 324 P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~di 403 (447)
|||+++++++|.+.||+||+|+++++++|++|+.+.++++++|+++|||||.++.|+|++||||+|+++.++.||||++|
T Consensus 313 Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdi 392 (428)
T 2ijz_A 313 PNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDI 392 (428)
T ss_dssp SSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEE
T ss_pred CCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEE
Confidence 99999999899999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred chhhhccchHHhhcCHHHHHHHHHHHHHHHHH
Q 013257 404 GAPQLSMHSIREMCAVDDVKHSYEHFKAFFQE 435 (447)
Q Consensus 404 giP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~ 435 (447)
|+|+|||||++|+++++|++++++|+++|+++
T Consensus 393 Gip~~~mHS~~E~~~~~D~~~~~~ll~af~~~ 424 (428)
T 2ijz_A 393 GLPTFAMHSIRELAGSHDLAHLVKVLGAFYAS 424 (428)
T ss_dssp CCCCCSCSSSSCCCCSSHHHHHHTTHHHHTTC
T ss_pred chhhcccchHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999985
No 5
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=100.00 E-value=1e-89 Score=720.05 Aligned_cols=403 Identities=21% Similarity=0.326 Sum_probs=352.4
Q ss_pred hchhhhcCCCcceeccccc----eEEee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCC
Q 013257 4 RGVCKQWGINRFQREKIGN----WKLAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGG 77 (447)
Q Consensus 4 ~~~~~~~~~sG~E~~~~~~----w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G 77 (447)
+++.+.+..+||| ++++. |.++| +||+++++++||||++|+++ ++++++||+|||||||||||++|.|+++|
T Consensus 42 ~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~-~~~g~~ii~AH~Dspgl~VK~~~~i~~~G 119 (461)
T 2glj_A 42 TELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEP-LYTGFKILGAHIDSPRLDLKQNPLYEDTD 119 (461)
T ss_dssp HHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSC-GGGCCEEEEEECCCCBBCCCSSCEEECSS
T ss_pred HHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcC-ccCCceEEEEecCcCCeEEecCCccCCCC
Confidence 4556777889997 55554 77888 99999986559999988652 23468999999999999999999999999
Q ss_pred eeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeee--eeCCCeEEecCCCccccccccc-CCCCCCCccc
Q 013257 78 YLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLV--RIDEPIMRIPTLAIHLDRNVNS-DGFKVNTQSH 154 (447)
Q Consensus 78 ~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv--~~~~~~gvI~~laiHl~~~~~~-~~~~~~~~~~ 154 (447)
|++|.+++|||++|+||++|+|+++|+|.++ +| +....+| ++++|+.+||++||||+++.++ +..+.+++++
T Consensus 120 ~l~l~~~~yGG~~~~~w~~~~L~l~g~vv~~---~g--~~~~~~Ig~~~~~pv~~Ip~laiHl~~~~~~~~~~~~~~~~~ 194 (461)
T 2glj_A 120 LAMLETHYYGGIKKYQWVTLPLAIHGVIVKK---DG--TIVNVCVGEDDNDPVFGVSDILVHLASEQLEKKASKVIEGED 194 (461)
T ss_dssp SEEECCCCBSCCCSCCCSSSCEEECCEEECT---TC--CEEECCBSCSTTSCBBCCCCCCGGGGGGTTSCTTCSSCCSCC
T ss_pred eEEEEeeccCCEeccccCCcccccceEEEEe---CC--CEEEEEEeccCCCcceecCCcccccCchhcccccccCCCccc
Confidence 9999888999999999999999999998874 45 4444455 7899999999999999987642 2257899999
Q ss_pred eeeeEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccc
Q 013257 155 LVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLD 234 (447)
Q Consensus 155 l~idiG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalD 234 (447)
|+||+|+.+.++ ++ + ..+|+..+++++++++||++||+++||+++++.++++.+|++++||.|++||
T Consensus 195 l~~~iG~~~~~~--------~~-e----~~~~~~~ll~~la~~~GI~~gD~v~~dl~l~~~~~~~~~G~~~~~I~s~~lD 261 (461)
T 2glj_A 195 LNILIGSIPLKD--------GE-E----KQKVKHNIMKILNEKYDISEEDFVSAELEIVPAGKARDYGFDRSMVMGYGQD 261 (461)
T ss_dssp CEEECSCCCSTT--------CC-C----SCHHHHHHHHHHHHSSCCCSTTGGGBCCCEEECSCCEEESTTCCEEEETTHH
T ss_pred ceEEEecCcccc--------cc-c----hhhhHHHHHHHHHHHcCCCcccEEEeeeeeEecCCcEEecCCCCEEEEecch
Confidence 999999875100 00 0 1356778999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCC-ChHHHHHhhhcceE
Q 013257 235 NLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCS-NSKLIEKAIQRSFL 313 (447)
Q Consensus 235 nr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~-~~~~~~~~~~~s~a 313 (447)
||+|||+++++|+++++ ++.+.++++||||||||+|++||++.|++++|+||+..+++ +.+.+.+++++|++
T Consensus 262 dr~~~~~~l~al~~~~~-------~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~~~~~S~~ 334 (461)
T 2glj_A 262 DRICAYTSFEAMLEMKN-------AKKTCITILVDKEEVGSIGATGMQSKFFENTVADIMSLCGDYDELKLRKALYNSEM 334 (461)
T ss_dssp HHHHHHHHHHHHHTCCS-------CSSCEEEEEECCGGGTCCTTTTSSSTTHHHHHHHHTC-----CCSCCCHHHHTCEE
T ss_pred hHHHHHHHHHHHHhhcc-------CCCeEEEEEEccCCCCCccccccccchHHHHHHHHHHhcCCCchHHHHHHHhcCcE
Confidence 99999999999998752 34678999999999999999999999999999999988775 56789999999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCccCCccEEEEc--CCCccc---cCHHHHHHHHHHHHhCCCCEEEEEe-ecCCCCCCC
Q 013257 314 VSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHN--ANQRYA---TNAVTSFVFREVASKHNLPVQDFVV-RNDMACGST 387 (447)
Q Consensus 314 Is~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~--~~~~~~---t~~~~~~~l~~~a~~~~Ip~Q~~~~-r~d~~~G~T 387 (447)
||+||+||.||||+++++++|.+.||+||+|+.+ ++++|+ +|+.+.+.++++|+++|||||.++. |+|++||||
T Consensus 335 iS~Dv~ha~~pn~~~~~~~~~~~~lg~G~vIk~~~~~~g~y~~~~~~~~~~~~l~~ia~~~~Ip~Q~~~~gr~d~~~GgT 414 (461)
T 2glj_A 335 LSSDVSAAFDPNYPNVMEKRNSAYLGKGIVFNKYTGSRGKSGCNDANPEYIAELRRILSKESVNWQTAELGKVDQGGGGT 414 (461)
T ss_dssp CCBCCEEBCCTTCCTTSCSTTSBCTTSCEEEBSCCCSTTSCSSCCCCHHHHHHHHHHHHHTCCCEEECCSSSSSSSCCCC
T ss_pred EEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeEEEeeeccCCCCccc
Confidence 9999999999999999998889999999999963 788886 4899999999999999999999887 999999999
Q ss_pred hHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHH
Q 013257 388 IGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ 434 (447)
Q Consensus 388 ~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~ 434 (447)
+|++. ++.||||+|||+|+||||||+|+++++|++++++|+++|++
T Consensus 415 ig~~~-a~~Gi~tvdiGiP~l~MHS~~E~~~~~Di~~~~~l~~af~~ 460 (461)
T 2glj_A 415 IAYIL-AEYGMQVIDCGVALLNMHAPWEISSKADIYETKNGYSAFLN 460 (461)
T ss_dssp THHHH-HTTTCBCCBBCCEEESTTSSSEEEEHHHHHHHHHHHHTTSC
T ss_pred HHHHH-hCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHHHHHh
Confidence 99887 79999999999999999999999999999999999999975
No 6
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=3.2e-87 Score=700.62 Aligned_cols=400 Identities=24% Similarity=0.354 Sum_probs=314.1
Q ss_pred hhhhcCCCcc-eeccccceEEee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCeeEEe
Q 013257 6 VCKQWGINRF-QREKIGNWKLAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVG 82 (447)
Q Consensus 6 ~~~~~~~sG~-E~~~~~~w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~~~l~ 82 (447)
+.+.+...|| |+++++. ++| +||++++++.|++|.+|+++ +++++.||+|||||||||||++|.|+++||++|.
T Consensus 42 ~~~~l~~~Gf~~l~e~~~--l~~g~~~~~~r~g~~i~a~~~G~~~-~~~g~~ii~AH~Dspgl~VK~~~~i~~~G~l~l~ 118 (458)
T 1y7e_A 42 ALDKAKKLGFINAEEKKN--LMPGDKIFYTCREKSVAFAIIGKNP-IEDGMNFIVSHTDSPRLDAKPSPISEENELTFIK 118 (458)
T ss_dssp HHHHHHTTTCEESTTCCC--CCTTCEEECBCSSSCBCCEECCSSC-GGGCCEECCCBCCCCBCCCCSSCCEEETTEEEEC
T ss_pred HHHHHHHcCCcccccccc--cCCCCeEEEECCCCEEEEEEeCCCC-CCCCcEEEEEccCcCCeEEecCCccCCCCeEEEE
Confidence 3445556788 7888877 777 99999987677778778653 2345789999999999999999999999999999
Q ss_pred EEEeCCCcccccccceeccccEEEEecCCCCCCCceeeee--eeCCCeEEecCCCcccccc-ccc-CCCCCCCccceeee
Q 013257 83 VQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLV--RIDEPIMRIPTLAIHLDRN-VNS-DGFKVNTQSHLVPI 158 (447)
Q Consensus 83 v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv--~~~~~~gvI~~laiHl~~~-~~~-~~~~~~~~~~l~id 158 (447)
+++|||++|++|+||+|+++|||.++ +| +.+..+| +.++|+.+||+|||||+++ .++ +..+.+++++|+||
T Consensus 119 ~~~yGG~~~~~w~~r~l~i~Grv~~~---~g--~~~~~~ig~~~~~pi~~Ip~LaiHl~~~~~~~~~~~~~~~~~~l~~~ 193 (458)
T 1y7e_A 119 TNYYGGIKKYQWLSTPLSIRGVVFLK---NG--EKVEINIGDNENDPVFVIPDILPHLDRKIQRNKKSDEIVEGENLKIL 193 (458)
T ss_dssp CCCBSSCCGGGGTTCCEEEEEEEECT---TC--CEEEEEESSSTTCCCBCCCCCC--------------------CCCEE
T ss_pred eeccCCeehhhhcCCEEEEEEEEEec---CC--CEEEEEEeccCCCceeccCCcCcccCchhhcccccccCCCccceEEE
Confidence 99999999999999999999999886 45 4444455 6789999999999999987 542 23578899999999
Q ss_pred EeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhh
Q 013257 159 LATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCM 238 (447)
Q Consensus 159 iG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g 238 (447)
+|+.+.+ ++ + ..+|+..|++++++++||++||+++||+++++.++++.+|++++||.|++||||+|
T Consensus 194 ig~~~~~---------~e-e----~~~~~~~ll~~l~~~~GI~~gD~v~~dL~l~~~~~~~~~G~~~~~I~s~~lDdr~~ 259 (458)
T 1y7e_A 194 IGSLPIE---------TK-E----KNKVKLATLQLIKEKYKIEEEDFVSSEIEIVPAGTAKDVGFDKALIGAYGQDDKIC 259 (458)
T ss_dssp EECCCCS---------CS-S----SCHHHHHHHHHHHHHHCCCTTTTSSSEEEEEECSCCEEETTTTCEEEESSHHHHHH
T ss_pred EecCcCc---------hh-h----hhhHHHHHHHHHHHHcCCCcccEEEeeeeeecccCeEEecCCCCeEEEecCccHHH
Confidence 9987521 00 1 14577889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhc-c-CC-ChHHHHHhhhcceEEE
Q 013257 239 SFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNS-F-CS-NSKLIEKAIQRSFLVS 315 (447)
Q Consensus 239 ~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~-~-~~-~~~~~~~~~~~s~aIs 315 (447)
||+++++|+++++ +++.+.++++||||||||+|++||++.|++++|+||+.. + ++ +.+.+.+++++|++||
T Consensus 260 ~~~~l~al~~~~~------~~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~~~~~~~S~~is 333 (458)
T 1y7e_A 260 VFTSLESIFDLEE------TPNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNSKSIS 333 (458)
T ss_dssp HHHHHHHHSSSSC------CCSSCEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHHHHHHHHCEEEE
T ss_pred HHHHHHHHHhhhc------cCCceEEEEEEcccccCcccchhhccchHHHHHHHHHHhhccCCcchHHHHHHHhcceEEE
Confidence 9999999987642 134678999999999999999999999999999999987 6 55 5889999999999999
Q ss_pred EecCCCCCCCCCCCCCCCCCCccCCccEEEE-c-CCCcccc---CHHHHHHHHHHHHhCCCCEEEEEe-ecCCCCCCChH
Q 013257 316 ADMAHALHPNYMDKHEDNHQPKLHGGLVIKH-N-ANQRYAT---NAVTSFVFREVASKHNLPVQDFVV-RNDMACGSTIG 389 (447)
Q Consensus 316 ~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~-~-~~~~~~t---~~~~~~~l~~~a~~~~Ip~Q~~~~-r~d~~~G~T~g 389 (447)
+||+||.|||||++++++|.+.||+||+|+. + ++++|++ |+.+.+.++++|+++|||||.++. |+|++||||+|
T Consensus 334 ~Dv~ha~dPn~~~~~~~~~~~~lg~G~vIk~~d~~~~~y~t~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~r~d~~~GgT~~ 413 (458)
T 1y7e_A 334 ADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGGGGTVA 413 (458)
T ss_dssp CCCEECCCC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCEEEEEECC-----CHHHH
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeEEEEeeccCCCCcCcHH
Confidence 9999999999999998889999999999996 3 7788865 899999999999999999999998 99999999999
Q ss_pred HHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHH
Q 013257 390 PILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ 434 (447)
Q Consensus 390 ~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~ 434 (447)
++. ++.||||++||+|+|||||++|+++++|++++++|+++|++
T Consensus 414 ~~~-a~~Gi~tvdiGiP~~~mHS~~E~~~~~Di~~~~~ll~af~~ 457 (458)
T 1y7e_A 414 KFL-AGYGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYR 457 (458)
T ss_dssp HHH-HHHTCEEEEECCEEBSTTSSSEEEEHHHHHHHHHHHHHTTT
T ss_pred HHH-hCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHHHHHh
Confidence 877 79999999999999999999999999999999999999985
No 7
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=100.00 E-value=9.5e-68 Score=538.34 Aligned_cols=328 Identities=21% Similarity=0.218 Sum_probs=278.2
Q ss_pred hhchhhhcCCCccee-ccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCC
Q 013257 3 RRGVCKQWGINRFQR-EKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKG 76 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~-~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~ 76 (447)
.++|++..++||+|. ++++.|. +++ ++.+|+. ||+|+.+.|+. +++|++||||++||||++ |+++
T Consensus 15 l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D~~-GNvi~~~~g~~-----~~v~l~aHmDtVg~mV~~---I~~~ 85 (354)
T 2vpu_A 15 MQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKL-GNVIAHFKGSS-----PRIMVAAHMDKIGVMVNH---IDKD 85 (354)
T ss_dssp HHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEECTT-CCEEEEECCSS-----SEEEEECCCCBCEEEEEE---ECTT
T ss_pred HHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEcCC-CeEEEEEcCCC-----CEEEEEecccccceeEEE---ECCC
Confidence 367888899999999 9999995 776 8888987 79999886642 479999999999999996 7999
Q ss_pred CeeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCccccccc-ccCCCCCCCccce
Q 013257 77 GYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNV-NSDGFKVNTQSHL 155 (447)
Q Consensus 77 G~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~-~~~~~~~~~~~~l 155 (447)
||+ +|.++|||++++ + .++||+|.++ +| ++ .|||+++|+|+.++. +++ +..+.++|
T Consensus 86 G~l--~~~~iGG~~~~~-----~-~~~~v~i~t~-~g--~~----------~Gvi~~~~~H~~~~~~~~~--~~~~~~~l 142 (354)
T 2vpu_A 86 GYL--HIVPIGGVLPET-----L-VAQRIRFFTE-KG--ER----------YGVVGVLPPHLRRGQEDKG--SKIDWDQI 142 (354)
T ss_dssp SCE--EEEEESSCCGGG-----G-TTCEEEEEET-TE--EE----------EEEECCCCSTTC-----------CCGGGC
T ss_pred CEE--EEEccCCccccc-----c-cCCEEEEEcC-CC--cE----------EEEEcCCCccccCcccccc--cCCCcceE
Confidence 995 679999966665 3 6889999987 66 33 699999999998765 332 33455899
Q ss_pred eeeEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccch
Q 013257 156 VPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDN 235 (447)
Q Consensus 156 ~idiG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDn 235 (447)
+||+|+.|+| +++++||++||+++||+.|++ +++++|.|++|||
T Consensus 143 ~iD~g~~s~e----------------------------e~~~~GI~~Gd~v~~d~~~~~--------~~~~~i~s~~lDn 186 (354)
T 2vpu_A 143 VVDVGASSKE----------------------------EAEEMGFRVGTVGEFAPNFTR--------LNEHRFATPYLDD 186 (354)
T ss_dssp CEECSCSSHH----------------------------HHHHTTCCTTCEEEECCCCEE--------CSSSEEECTTHHH
T ss_pred EEEecCCCHH----------------------------HHHhcCCCCCCEEEEeeEEEE--------eCCceEEEecCcc
Confidence 9999999976 678999999999999999987 4678999999999
Q ss_pred hhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEE
Q 013257 236 LCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVS 315 (447)
Q Consensus 236 r~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs 315 (447)
|+|||+++++|+++++ .+.+++++||+|||||+|||++|++.+.| |++||
T Consensus 187 r~g~~~~l~~l~~l~~-------~~~~v~~~ft~qEEVG~~ga~~aa~~i~p-----------------------d~~i~ 236 (354)
T 2vpu_A 187 RICLYAMIEAARQLGD-------HEADIYIVGSVQEEVGLRGARVASYAINP-----------------------EVGIA 236 (354)
T ss_dssp HHHHHHHHHHHHHCCC-------CSSEEEEEECSCCTTTSHHHHHHHHHHCC-----------------------SEEEE
T ss_pred HHHHHHHHHHHHHhhc-------CCCeEEEEEECCcccCccchhhhhcccCC-----------------------CEEEE
Confidence 9999999999998753 24568899999999999999999887655 58999
Q ss_pred EecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcC
Q 013257 316 ADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASG 395 (447)
Q Consensus 316 ~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~ 395 (447)
+|++||.||+| + ..+.+.||+||+++. ++++|+.+.+.++++|+++|||||.++.. ..||+|+++++.++
T Consensus 237 ~Dv~~a~dp~~-~---~~~~~~lg~Gpv~d~----~~~~~~~l~~~l~~~a~~~gIp~q~~~~~--g~gGtDa~~i~~a~ 306 (354)
T 2vpu_A 237 MDVTFAKQPHD-K---GKIVPELGKGPVMDV----GPNINPKLRAFADEVAKKYEIPLQVEPSP--RPTGTDANVMQINK 306 (354)
T ss_dssp EEEEECCCTTS-T---TCCCCCTTSCCEEEE----STTSCHHHHHHHHHHHHHTTCCCEEEECC--SCCSSTHHHHHTST
T ss_pred ecccccCCCCc-c---cccCceECCcceEcC----CCCCCHHHHHHHHHHHHHcCCCcEEEeCC--CCCccHHHHHHHhc
Confidence 99999999988 2 345689999998863 58889999999999999999999998731 12456688999999
Q ss_pred CCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 396 VGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 396 ~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
.||||++||+|+|||||++|+++++|++++++|+.+|++++++
T Consensus 307 ~Gipt~~Igvp~~~~Hs~~E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 307 EGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp TCCEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCEEEECcccccCcCcceEeeHHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999999999999999998865
No 8
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=100.00 E-value=3.2e-67 Score=531.89 Aligned_cols=320 Identities=18% Similarity=0.173 Sum_probs=275.0
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGG 77 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G 77 (447)
.++|++..++||||.++++.|. +++ ++++|+. ||+|+.+ |++ .+++|++|||||+||||+. |+++|
T Consensus 17 l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D~~-Gnvi~~~-g~~----~~~v~l~aHmDevG~mV~~---I~~~G 87 (343)
T 3isx_A 17 IRKLTEAFGPSGREEEVRSIILEELEGHIDGHRIDGL-GNLIVWK-GSG----EKKVILDAHIDEIGVVVTN---VDDKG 87 (343)
T ss_dssp HHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEECTT-CCEEEEE-CCC----SSEEEEEEECCBCEEEEEE---ECTTS
T ss_pred HHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEECCC-CCEEEEE-CCC----CCEEEEEecccccceEEEE---ECCCC
Confidence 3678999999999999999995 777 8899997 7999987 532 3579999999999999996 79999
Q ss_pred eeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceee
Q 013257 78 YLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVP 157 (447)
Q Consensus 78 ~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~i 157 (447)
|+ +|.++|||++++ | .++||+|.+ ++ .|+|++.|+|+.++++++ +..+.++|+|
T Consensus 88 ~l--~~~~vGG~~~~~-----~-~~~~v~i~t------~~----------~Gvig~~~~H~~~~~~~~--~~~~~~~l~i 141 (343)
T 3isx_A 88 FL--TIEPVGGVSPYM-----L-LGKRIRFEN------GT----------IGVVGMEGETTEERQENV--RKLSFDKLFI 141 (343)
T ss_dssp CE--EEEEESSCCHHH-----H-TTCEEEETT------SC----------EEEEEECCCSHHHHHHHH--HTCCGGGEEE
T ss_pred eE--EEEecCCcCccc-----c-CCcEEEEec------cE----------EEEEecccccccChhhcc--cCCCcceEEE
Confidence 95 679999965554 4 688898875 23 699999999998654432 2234489999
Q ss_pred eEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhh
Q 013257 158 ILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLC 237 (447)
Q Consensus 158 diG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~ 237 (447)
|+|+.|+| +++++ |++||+++||..|.. ++ ++|.|++||||+
T Consensus 142 D~g~~s~e----------------------------e~~~~-I~vGd~v~~~~~~~~--------~~-~~i~s~~lDdR~ 183 (343)
T 3isx_A 142 DIGANSRE----------------------------EAQKM-CPIGSFGVYDSGFVE--------VS-GKYVSKAMDDRI 183 (343)
T ss_dssp ECSCSSHH----------------------------HHHHH-SCTTCEEEESCCCEE--------ET-TEEEESCHHHHH
T ss_pred EeCCCCHH----------------------------HHHhc-CCCCCEEEecCceEE--------ec-cEEEeccCccHH
Confidence 99999976 56788 999999999988776 33 699999999999
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEe
Q 013257 238 MSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSAD 317 (447)
Q Consensus 238 g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~D 317 (447)
|||+++++|++++. ..+++++||+|||||+|||++|++.+.|| ++||+|
T Consensus 184 g~~~~l~~l~~l~~--------~~~~~~~ft~qEEVG~~Ga~~aa~~i~pd-----------------------~~i~vD 232 (343)
T 3isx_A 184 GCAVIVEVFKRIKP--------AVTLYGVFSVQEEVGLVGASVAGYGVPAD-----------------------EAIAID 232 (343)
T ss_dssp HHHHHHHHHHHCCC--------SSEEEEEEECCCCTTSCCSTTTGGGCCCS-----------------------EEEEEE
T ss_pred HHHHHHHHHHhccC--------CCeEEEEEECCcccCchhHHHHhhcCCCC-----------------------EEEEEe
Confidence 99999999998742 35689999999999999999999997665 899999
Q ss_pred cCCCCC-CCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCC
Q 013257 318 MAHALH-PNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGV 396 (447)
Q Consensus 318 v~ha~~-P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~ 396 (447)
++||.| |++++ ++.+.||+||+|+++++ ++.+|+.+.+.++++|+++|||||.++.+ .+|+++++++.++.
T Consensus 233 v~~a~d~p~~~~----~~~~~lg~GpvI~~~d~-~~~~d~~l~~~l~~~A~~~gIp~Q~~v~~---ggGTDa~~i~~a~~ 304 (343)
T 3isx_A 233 VTDSADTPKAIK----RHAMRLSGGPALKVKDR-ASISSKRILENLIEIAEKFDIKYQMEVLT---FGGTNAMGYQRTRE 304 (343)
T ss_dssp EEECCCSTTCCC----TTCCCTTSCCEEECBTT-CCHHHHHHHHHHHHHHHHTTCCCEECCCB---CCCSSHHHHHHHTS
T ss_pred CcCCCCCCCccc----ccccccCCCcEEEEcCC-CCCCCHHHHHHHHHHHHHCCCCeEEecCC---CCchHHHHHHHhcC
Confidence 999998 88763 34689999999999988 48999999999999999999999997753 25556789999999
Q ss_pred CCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHH
Q 013257 397 GIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ 434 (447)
Q Consensus 397 Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~ 434 (447)
||||++||+|+|||||++|+++++|++++++|+.+|++
T Consensus 305 Gipt~~Igvp~r~~Hs~~E~~~~~Di~~~~~ll~~~l~ 342 (343)
T 3isx_A 305 GIPSATVSIPTRYVHSPSEMIAPDDVEATVDLLIRYLG 342 (343)
T ss_dssp SCCEEEEEEEEBSTTSTTEEECHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEccccccccchhhEecHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999984
No 9
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=100.00 E-value=1e-66 Score=531.03 Aligned_cols=332 Identities=16% Similarity=0.105 Sum_probs=271.6
Q ss_pred hchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCe
Q 013257 4 RGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGY 78 (447)
Q Consensus 4 ~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~ 78 (447)
++|++..++||+|.++++.|. +++ ++++|+. |||+|.+.|+.. +.+.+|++||||++||||++ |+++||
T Consensus 10 ~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D~~-GNli~~~~g~~~--~~~~v~l~aHmD~Vg~mV~~---I~~~G~ 83 (355)
T 3kl9_A 10 KEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGL-GGIFGIKHSEAV--DAPRVLVASHMDEVGFMVSE---IKPDGT 83 (355)
T ss_dssp HHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEECTT-SCEEEEECCCST--TCCEEEEEEECCBCEEEEEE---ECTTSC
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEECCC-CeEEEEECCcCC--CCCeEEEEeccccccceEEE---ECCCCE
Confidence 678899999999999999995 777 7888887 799998866431 13579999999999999996 799999
Q ss_pred eEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceeee
Q 013257 79 LEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPI 158 (447)
Q Consensus 79 ~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~id 158 (447)
+ +|.++|||+++++ .++||+|.++ +| +.+ .|+|++.|||+.++.+++ +..+.++|+||
T Consensus 84 l--~~~~iGG~~~~~~------~~~~v~i~t~-~g--~~~---------~Gvig~~~~H~~~~~~~~--~~~~~~~~~iD 141 (355)
T 3kl9_A 84 F--RVVEIGGWNPMVV------SSQRFKLLTR-DG--HEI---------PVISGSVPPHLTRGKGGP--TMPAIADIVFD 141 (355)
T ss_dssp E--EEEEESCCCTTTC------SSCEEEEECT-TS--CEE---------EEEEC-----------------CCGGGSCEE
T ss_pred E--EEEecCCcccccc------CCCEEEEEcC-CC--CEE---------EEEEeCccccccChhhcc--CCCChhhEEEE
Confidence 5 6799999666653 6889999987 67 422 699999999998765432 33455899999
Q ss_pred EeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhh
Q 013257 159 LATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCM 238 (447)
Q Consensus 159 iG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g 238 (447)
+|+.|+| +++++||++||+++||..+.... ++++|.|++||||+|
T Consensus 142 ~g~~s~e----------------------------e~~~~GI~~Gd~v~~d~~~~~~~-------~~~~i~s~~lDnr~g 186 (355)
T 3kl9_A 142 GGFADKA----------------------------EAESFGIRPGDTIVPDSSAILTA-------NEKNIISKAWDNRYG 186 (355)
T ss_dssp CCCSSHH----------------------------HHHHTTCCTTCEEEECCCCEECT-------TSSEEEESCHHHHHH
T ss_pred eccCCHH----------------------------HHHHcCCCCCCEEEeccceEEec-------CCCEEEeeccccHHH
Confidence 9999976 67899999999999999877631 457999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEec
Q 013257 239 SFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADM 318 (447)
Q Consensus 239 ~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~Dv 318 (447)
||+++++|+++++. .+..+++++|++|||||+|||++|++.+.| |++|++|+
T Consensus 187 ~~~~l~~l~~l~~~-----~~~~~v~~~ft~qEEvG~~Ga~~a~~~~~p-----------------------d~~i~~D~ 238 (355)
T 3kl9_A 187 VLMVSELAEALSGQ-----KLGNELYLGSNVQEEVGLRGAHTSTTKFDP-----------------------EVFLAVDC 238 (355)
T ss_dssp HHHHHHHHHHHSSC-----CCSSEEEEEEESCCTTTSHHHHHHHHHHCC-----------------------SEEEEEEE
T ss_pred HHHHHHHHHHhhhc-----CCCceEEEEEECccccCcchhHHHHhccCC-----------------------CEEEEecC
Confidence 99999999988641 135678999999999999999999887655 58999999
Q ss_pred CCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCC
Q 013257 319 AHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGI 398 (447)
Q Consensus 319 ~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi 398 (447)
+||.|| |+. .++||+||+|+++++ ++.+|+.+.++++++|+++|||||. +.+ .+|+++++++.++.||
T Consensus 239 ~~a~d~--p~~-----~~~lg~G~~i~~~d~-~~~~~~~l~~~l~~~a~~~gIp~q~-~~~---ggGtDa~~i~~a~~Gi 306 (355)
T 3kl9_A 239 SPAGDV--YGG-----QGKIGDGTLIRFYDP-GHLLLPGMKDFLLTTAEEAGIKYQY-YCG---KGGTDAGAAHLKNGGV 306 (355)
T ss_dssp EECCGG--GTS-----SCCTTSCEEEEEEET-TEECCHHHHHHHHHHHHHTTCCEEE-EEC---SSCCTHHHHTTSTTCC
T ss_pred ccCCCC--CCc-----ccccCCCcEEEEecC-CCCCCHHHHHHHHHHHHHcCCCEEE-ECC---CcchHHHHHHHhCCCC
Confidence 999985 221 478999999999887 4899999999999999999999999 543 2455578999999999
Q ss_pred cEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 399 RTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 399 ~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
||++||+|+|||||++|+++++|++++++|+.+|+++++.
T Consensus 307 pt~~igvp~~~~Hs~~E~~~~~Di~~~~~ll~~~l~~l~~ 346 (355)
T 3kl9_A 307 PSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQALVKKLDR 346 (355)
T ss_dssp CEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred CEEEEccCcCCCCCcceEeeHHHHHHHHHHHHHHHHHhCH
Confidence 9999999999999999999999999999999999998854
No 10
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=100.00 E-value=1e-48 Score=397.02 Aligned_cols=332 Identities=18% Similarity=0.205 Sum_probs=265.7
Q ss_pred hhchhhhcCCCcce-eccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCC
Q 013257 3 RRGVCKQWGINRFQ-REKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKG 76 (447)
Q Consensus 3 ~~~~~~~~~~sG~E-~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~ 76 (447)
.++|++..++||+| .++++.|. +++ ++++|+. ||++|+..|+ ++++|++||||+|||+||+ |+++
T Consensus 12 l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d~~-gnlia~~~g~-----~~~i~l~aH~D~v~~~v~~---i~~~ 82 (353)
T 1y0y_A 12 LKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKL-GNVIAHKKGE-----GPKVMIAAHMDQIGLMVTH---IEKN 82 (353)
T ss_dssp HHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEECTT-CCEEEEECCS-----SCEEEEEEECCBCEEEEEE---ECTT
T ss_pred HHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEcCC-CCEEEEecCC-----CccEEEEeccCcccEEEEE---ECCC
Confidence 45678888899999 88888884 666 7788876 7999987543 2479999999999999997 6999
Q ss_pred CeeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCcccee
Q 013257 77 GYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLV 156 (447)
Q Consensus 77 G~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~ 156 (447)
||+ +|++||||++++| ++++|.++++ +| +.. .|+|+.+++|+.++.++ .+.+++++|+
T Consensus 83 G~l--~~~~~Gg~~~~~~------~~~~v~v~~~-~g--~~~---------~g~i~~~~~h~~~~~~~--~~~~~~~~l~ 140 (353)
T 1y0y_A 83 GFL--RVAPIGGVDPKTL------IAQRFKVWID-KG--KFI---------YGVGASVPPHIQKPEDR--KKAPDWDQIF 140 (353)
T ss_dssp SCE--EEEEESSCCGGGT------TTCEEEEEEE-TT--EEE---------EEEEEC---------------CCCGGGCE
T ss_pred ceE--EEEEeCCcchhhc------cCCEEEEEeC-CC--cEE---------EEEEeCCCcccCchhhc--cCCCChHHeE
Confidence 995 5699999999988 4788888876 66 322 59999999999876542 3567779999
Q ss_pred eeEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchh
Q 013257 157 PILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNL 236 (447)
Q Consensus 157 idiG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr 236 (447)
+|+|+.+++ +++++||.+||+++||..+.. +++++|.|+++||+
T Consensus 141 ~d~g~~~~~----------------------------~~~~~gi~~Gd~v~~~~~~~~--------~~~~~i~gra~D~k 184 (353)
T 1y0y_A 141 IDIGAESKE----------------------------EAEDMGVKIGTVITWDGRLER--------LGKHRFVSIAFDDR 184 (353)
T ss_dssp EECSCSSHH----------------------------HHHHTTCCTTCEEEECCCCEE--------ETTTEEEETTHHHH
T ss_pred EEeCCCCHH----------------------------HHHHcCCCCCCEEEeccCcEE--------ecCCeEEeccCccH
Confidence 999998765 678899999999999987654 46789999999999
Q ss_pred hhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEE
Q 013257 237 CMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSA 316 (447)
Q Consensus 237 ~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~ 316 (447)
.||++++++++.+.+ .+..++++++++||+|++|++.+... +.++++|++
T Consensus 185 ~g~a~~l~a~~~l~~-------~~~~i~~~~~~~EE~g~~G~~~~~~~-----------------------~~~~~~i~~ 234 (353)
T 1y0y_A 185 IAVYTILEVAKQLKD-------AKADVYFVATVQEEVGLRGARTSAFG-----------------------IEPDYGFAI 234 (353)
T ss_dssp HHHHHHHHHHHHCCS-------CSSEEEEEEESCCTTTSHHHHHHHHH-----------------------HCCSEEEEE
T ss_pred HHHHHHHHHHHHhhc-------CCCeEEEEEECCcccchhHHHHHhhc-----------------------cCCCEEEEE
Confidence 999999999988752 24568899999999999998866322 467899999
Q ss_pred ecCCCC-CCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcC
Q 013257 317 DMAHAL-HPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASG 395 (447)
Q Consensus 317 Dv~ha~-~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~ 395 (447)
|++++. +|.+.. .++.+.||+||+|++.++ ++..++.+.+.++++|++.++|+|..... .+|+++++++.++
T Consensus 235 d~~~~~~~p~~~~---~~g~~~lg~G~~i~~~d~-~~~~~~~l~~~l~~~a~~~gi~~~~~~~~---~ggsDa~~~~~~~ 307 (353)
T 1y0y_A 235 DVTIAADIPGTPE---HKQVTHLGKGTAIKIMDR-SVICHPTIVRWLEELAKKHEIPYQLEILL---GGGTDAGAIHLTK 307 (353)
T ss_dssp EEEECCCSTTCCG---GGCCCCTTSCEEEEEEET-TEECCHHHHHHHHHHHHHTTCCEEEEECS---SCCCTHHHHTTST
T ss_pred ecccccCCCCCcc---ccCccccCCCcEEEEeCC-CCCCCHHHHHHHHHHHHHcCCCEEEeecC---CCCchHHHHHHhC
Confidence 999986 566542 334678999999998665 47789999999999999999999985531 3445567888788
Q ss_pred CCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 396 VGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 396 ~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
.||||+.+|+|.+||||+.|.++++|++.+++++.+|+..+..
T Consensus 308 ~GiPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 308 AGVPTGALSVPARYIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp TCCCEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcEEEEcccccccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999998764
No 11
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=2.3e-47 Score=390.23 Aligned_cols=337 Identities=18% Similarity=0.177 Sum_probs=274.9
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGG 77 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G 77 (447)
.++|++..++||+|.++++.+. +++ ++++|+. ||++|+..|+. +++++|+.||||+|+|+||+ |+++|
T Consensus 13 l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~~-gnlia~~~g~~---~~~~vll~aH~D~v~~~v~~---i~~~G 85 (373)
T 1vhe_A 13 LKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRL-GSLIAKKTGAE---NGPKIMIAGHLDEVGFMVTQ---ITDKG 85 (373)
T ss_dssp HHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEECTT-CCEEEEEESST---TSCEEEEEEECCCCEEEEEE---ECTTS
T ss_pred HHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEcCC-CcEEEEecCCC---CCceEEEEecCCcCCEEEEE---ECCCC
Confidence 3577888899999998888874 666 7888886 79999887752 13579999999999999997 69999
Q ss_pred eeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceee
Q 013257 78 YLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVP 157 (447)
Q Consensus 78 ~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~i 157 (447)
|+ +|++|||+++++| ++++|+|++. +| .+ .|+|+.++||+.++.+ ..+.+++++|++
T Consensus 86 ~l--~~~~~Gg~~~~~~------~~~~v~v~~~-~g--~~----------~g~i~~~~~h~~~~~~--~~~~~~~~~l~i 142 (373)
T 1vhe_A 86 FI--RFQTVGGWWAQVM------LAQRVTIVTK-KG--EI----------TGVIGSKPPHILSPEA--RKKSVEIKDMFI 142 (373)
T ss_dssp CE--EEEEESCCCGGGT------TTCEEEEEET-TE--EE----------EEEEECCCGGGSCTTT--TTSCCCGGGCEE
T ss_pred eE--EEEEeCCcchhhc------cCCEEEEEeC-CC--cE----------EEEEcCCCcccCchhh--ccCCCChhHeEE
Confidence 95 5799999999998 4889999875 44 22 5999999999876543 246677899999
Q ss_pred eEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhh
Q 013257 158 ILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLC 237 (447)
Q Consensus 158 diG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~ 237 (447)
|+|+.+++ +++++||.+||+++||..+.. +| ++++|.|+++||+.
T Consensus 143 d~g~~s~~----------------------------~~~~~gi~~Gd~v~~~~~~~~------~~-~~~~i~gr~~D~k~ 187 (373)
T 1vhe_A 143 DIGASSRE----------------------------EALEWGVLPGDMIVPHFEFTV------MN-NEKFLLAKAWDNRI 187 (373)
T ss_dssp ECSCSSHH----------------------------HHHHTTCCTTCEEEECCCCEE------CS-STTEEEETTHHHHH
T ss_pred EecCCCHH----------------------------HHHHcCCCCCCEEEEccccEE------ec-CCCeEEeccCccHH
Confidence 99998765 567899999999999986654 33 57899999999999
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEe
Q 013257 238 MSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSAD 317 (447)
Q Consensus 238 g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~D 317 (447)
||++++++++.+... .....++++++++||+|++|++.+... +.++++|++|
T Consensus 188 g~a~~l~a~~~l~~~-----~~~~~v~~~~~~~EE~G~~G~~~~~~~-----------------------~~~d~~i~~d 239 (373)
T 1vhe_A 188 GCAIAIDVLRNLQNT-----DHPNIVYGVGTVQEEVGLRGAKTAAHT-----------------------IQPDIAFGVD 239 (373)
T ss_dssp HHHHHHHHHHHHHTS-----CCSSEEEEEEESCCTTTSHHHHHHHHH-----------------------HCCSEEEEEE
T ss_pred HHHHHHHHHHHHhhc-----CCCceEEEEEECCcccChhhHHHHhcc-----------------------cCCCEEEEEe
Confidence 999999999887531 124568899999999999988765322 4678999999
Q ss_pred cCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCC
Q 013257 318 MAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVG 397 (447)
Q Consensus 318 v~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~G 397 (447)
.+++.+ +++.....+.+.||+||++++.+.. +..++.+.+.++++|++.|+|+|..... .+|+++++++.++.|
T Consensus 240 ~~~~~~--~~g~~~~~~~~~lg~G~~i~~~~~~-~~~~~~l~~~l~~~a~~~gi~~~~~~~~---~ggtDa~~~~~~~~G 313 (373)
T 1vhe_A 240 VGIAGD--TPGISEKEAQSKMGKGPQIIVYDAS-MVSHKGLRDAVVATAEEAGIPYQFDAIA---GGGTDSGAIHLTANG 313 (373)
T ss_dssp EEECCC--STTCCTTTCCCCTTSCCEEEEEETT-EECCHHHHHHHHHHHHHHTCCCEEEEET---TCCCTHHHHTTSTTC
T ss_pred ccccCC--CCCCcccccccccCCCceEEEeCCC-CCCCHHHHHHHHHHHHHcCCCeEEecCC---CCCccHHHHHHhCCC
Confidence 999765 2332223456789999999986653 7889999999999999999999985532 344446777778899
Q ss_pred CcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 398 IRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 398 i~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
||++.+|+|.+||||+.|.++++|++.+++++.+++..+..
T Consensus 314 iPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 314 VPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKLDR 354 (373)
T ss_dssp CCEEEEEEEEBSTTSSCEEEEHHHHHHHHHHHHHHHHHCCH
T ss_pred CcEEEEccccccCCChhheecHHHHHHHHHHHHHHHHHhcH
Confidence 99999999999999999999999999999999999988754
No 12
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=2.1e-47 Score=385.47 Aligned_cols=324 Identities=15% Similarity=0.149 Sum_probs=265.3
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGG 77 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G 77 (447)
.++|++..++||+|.++++.|. +++ ++++|+. ||++|+..|++ .+++|++||||+|+|+|++ ++++|
T Consensus 9 l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d~~-gnlia~~~g~~----~~~vll~aH~DtV~~~v~~---i~~~G 80 (348)
T 1ylo_A 9 LKALSEADAIASSEQEVRQILLEEAARLQKEVRFDGL-GSVLIRLNEST----GPKVMICAHMDEVGFMVRS---ISREG 80 (348)
T ss_dssp HHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEECTT-CCEEEECCCCS----SCEEEEEEECCCCEEEEEE---ECTTC
T ss_pred HHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEecC-CCEEEEecCCC----CceEEEEEcCCccceEEEE---ECCCC
Confidence 4678888899999988888774 666 7888887 79999875532 3579999999999999997 68899
Q ss_pred eeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceee
Q 013257 78 YLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVP 157 (447)
Q Consensus 78 ~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~i 157 (447)
+++ +.+|||++|++|. +++|.+.++ + | .+++|+. +.+ .+.+++++|+|
T Consensus 81 ~~~--~~~~Gg~~~~~~~------g~~v~~~~~-~----------------G---~~~~h~~-~~~---~~~~~~~~l~i 128 (348)
T 1ylo_A 81 AID--VLPVGNVRMAARQ------LQPVRITTR-E----------------E---CKIPGLL-DGD---RQGNDVSAMRV 128 (348)
T ss_dssp CEE--EEEESCCCGGGSS------SEEEEEECT-T----------------C---CEEEEEE-EEE---EETTEEEEEEE
T ss_pred eEE--EEecCCcchhhcc------CCEEEEEeC-C----------------C---CCCcchh-hhh---ccCCChhHEEE
Confidence 964 5899999999984 677777653 2 2 4689988 332 23566699999
Q ss_pred eEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhh
Q 013257 158 ILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLC 237 (447)
Q Consensus 158 diG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~ 237 (447)
|+|..+++ +++++||++||+++++..+.. +.++++.|+++|||.
T Consensus 129 d~G~~s~~----------------------------~~~~~gi~~g~~i~~~~~~~~--------~~~~~~~~~~~D~k~ 172 (348)
T 1ylo_A 129 DIGARTYD----------------------------EVMQAGIRPGDRVTFDTTFQV--------LPHQRVMGKAFDDRL 172 (348)
T ss_dssp ECSCCSHH----------------------------HHHHTTCCTTCEEEECCCCEE--------ETTTEEEETTHHHHH
T ss_pred EecCCCHH----------------------------HHHHcCCCCCCEEEEccccEE--------ecCCEEEecCcccHH
Confidence 99988654 567899999999999986654 357899999999999
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEe
Q 013257 238 MSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSAD 317 (447)
Q Consensus 238 g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~D 317 (447)
||++++++++.+... ..+...++++|+|||+|++|++++.+. +.++++|++|
T Consensus 173 g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~~-----------------------i~~~~~i~~D 224 (348)
T 1ylo_A 173 SCYLLVTLLRELHDA-----ELPAEVWLVASSSEEVGLRGGQTATRA-----------------------VSPDVAIVLD 224 (348)
T ss_dssp HHHHHHHHHHHHTTC-----CCSSEEEEEEESCCTTSSHHHHHHHHH-----------------------HCCSEEEEEC
T ss_pred HHHHHHHHHHHhhhc-----CCCceEEEEEEcccccchhHHHHhhcc-----------------------cCCCEEEEEe
Confidence 999999999887531 123567899999999999999887654 3567999999
Q ss_pred cCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCC
Q 013257 318 MAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVG 397 (447)
Q Consensus 318 v~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~G 397 (447)
++|+.+ +++.. ..+.+.+|+||+|++.++ ++..|+.+.+.++++|+++|||+|.++.. ++|++++.++.++.|
T Consensus 225 ~~~~~~--~~~~~-~~~~~~~~~G~~i~~~~~-~~~~~~~l~~~~~~~a~~~gi~~~~~~~~---~ggsDa~~~~~~~~g 297 (348)
T 1ylo_A 225 TACWAK--NFDYG-AANHRQIGNGPMLVLSDK-SLIAPPKLTAWIETVAAEIGVPLQADMFS---NGGTDGGAVHLTGTG 297 (348)
T ss_dssp CCCCSS--TTCCS-TTCCCCTTSCCEEEEECS-SCBCCHHHHHHHHHHHHHHTCCCEEEECS---SCCCHHHHHHTSTTC
T ss_pred ccccCC--CCCCC-ccccccCCCCcEEEEeCC-CCCCCHHHHHHHHHHHHHcCCCeEEeecC---CCcchHHHHHHhcCC
Confidence 999975 34332 245678999999999866 48899999999999999999999996642 344446788888999
Q ss_pred CcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhh
Q 013257 398 IRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFS 437 (447)
Q Consensus 398 i~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~ 437 (447)
|||+.+|+|++||||+.|+++++|++.+++++.+|+..+.
T Consensus 298 ipt~~lg~~~~~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 298 VPTLVMGPATRHGHCAASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp CCEEEEECCCBSCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECcccCcCCCcceEeeHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999998875
No 13
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=3.5e-47 Score=384.10 Aligned_cols=320 Identities=21% Similarity=0.160 Sum_probs=254.6
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGG 77 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G 77 (447)
.++|++..++||+|.++++.+. +++ ++++|+. |||+|+..|++ .+++|++||||+|||+|+++ + +|
T Consensus 11 l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~~-gnlia~~~g~~----~~~i~l~aH~DtV~~~v~~i---~-~G 81 (346)
T 1vho_A 11 LMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTTRH-GSLIGYKKGKG----IGKLAFFAHVDEIGFVVSKV---E-GQ 81 (346)
T ss_dssp HHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEECTT-SCEEEEECCSS----SCEEEEEEECCBCCEEEEEE---E-TT
T ss_pred HHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEecC-CcEEEEEcCCC----CceEEEEecCcccceEeEEe---c-CC
Confidence 3567888889999998888884 666 7888886 79999986642 35799999999999999974 5 89
Q ss_pred eeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceee
Q 013257 78 YLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVP 157 (447)
Q Consensus 78 ~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~i 157 (447)
+++ +.+||| |.++.+ .+++|.+++. +| .+ .|+|+.+++|+.++.++ .+.+++++|+|
T Consensus 82 ~l~--~~~~Gg-----~~~~~~-~g~~~~~~~~-~g--~~----------~G~i~~~~~h~~~~~~~--~~~~~~~~l~i 138 (346)
T 1vho_A 82 FAR--LEPVGG-----VDPKVV-YASKVRIYTK-NG--IE----------RGVIGMLAPHLQDSESR--KKVPTYDEIFV 138 (346)
T ss_dssp EEE--EEEC--------------CCCEEEEEET-TE--EE----------EEETTCCCSCCCCHHHH--HTSCCTTCCEE
T ss_pred eEE--EEEeCC-----ccCccc-ccCEEEEEcC-CC--cE----------EEEEcCCCcccCchhhc--ccCCChhHeEE
Confidence 965 599999 777777 7899988765 44 23 69999999999876542 24566699999
Q ss_pred eEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhh
Q 013257 158 ILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLC 237 (447)
Q Consensus 158 diG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~ 237 (447)
|+|+.+ + + |++||+++|+..+.. . + +++.|+++|||.
T Consensus 139 d~g~~~-e----------------------------e-----i~~G~~~~~~~~~~~------~--g-~~i~g~~~D~r~ 175 (346)
T 1vho_A 139 DLSLCE-R----------------------------G-----VRVGDIAVIDQTAFE------T--N-GKVVGKALDNRA 175 (346)
T ss_dssp EGGGSS-S----------------------------C-----CCTTCEEEECCCCEE------E--T-TEEEETTHHHHH
T ss_pred Eeccch-h----------------------------c-----CCCCCEEEEccchhh------h--c-CeEEeccCccHH
Confidence 999875 3 1 889999999987653 2 3 789999999999
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEe
Q 013257 238 MSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSAD 317 (447)
Q Consensus 238 g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~D 317 (447)
||++++++++.+... ..+...++++|+|||+|++|+.+++..+ .++++|++|
T Consensus 176 g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~~i-----------------------~~~~~i~~D 227 (346)
T 1vho_A 176 SCGVLVKVLEFLKRY-----DHPWDVYVVFSVQEETGCLGALTGAYEI-----------------------NPDAAIVMD 227 (346)
T ss_dssp HHHHHHHHHHHHTTC-----CCSSEEEEEEECTTSSSHHHHHHTTCCC-----------------------CCSEEEEEE
T ss_pred HHHHHHHHHHHhhhc-----CCCceEEEEEECCcccchhhHHHHhccc-----------------------CCCEEEEee
Confidence 999999999887631 1235678999999999999999887654 567999999
Q ss_pred cCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCC-CCCChHHHHhcCC
Q 013257 318 MAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMA-CGSTIGPILASGV 396 (447)
Q Consensus 318 v~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~-~G~T~g~i~~a~~ 396 (447)
++|+.+ +++.. .+.+|+||+|++ .+..|+.+.+.++++|+++|||+|..+.+ + +|++++.++.++.
T Consensus 228 ~~~~~~--~~~~~----~~~~~~g~~i~~----~~~~~~~l~~~~~~~a~~~gi~~~~~~~~---g~ggsDa~~~~~~~~ 294 (346)
T 1vho_A 228 VTFASE--PPFSD----HIELGKGPVIGL----GPVVDRNLVQKIIEIAKKHNVSLQEEAVG---GRSGTETDFVQLVRN 294 (346)
T ss_dssp EECCCC--TTSCC----CCCTTSCCEEEC----STTSCHHHHHHHHHHHHHTTCCCEEESSC---CC----CTTHHHHHT
T ss_pred cccccC--CCCCc----ccccCCCceEEe----CCcCCHHHHHHHHHHHHHCCCCEEEEeCC---CCCCchHHHHHHhCC
Confidence 999985 34332 178999999998 36789999999999999999999997641 2 4555788888899
Q ss_pred CCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 397 GIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 397 Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
||||+++|+|++||||+.|+++++|++.+++++.+|++++..
T Consensus 295 gipt~~lg~~~~~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~ 336 (346)
T 1vho_A 295 GVRTSLISIPLKYMHTPVEMVDPRDVEELARLLSLVAVELEV 336 (346)
T ss_dssp TCEEEEEEEECBSTTSTTEEECHHHHHHHHHHHHHHHHHCC-
T ss_pred CCcEEEEehhhcccccHHHhcCHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999998755
No 14
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=1.2e-46 Score=381.46 Aligned_cols=323 Identities=14% Similarity=0.124 Sum_probs=233.0
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGG 77 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G 77 (447)
.++|++..++||.|.+..+.+. ++. ++..+.. |||+|+..|+.. .+.+|+.||||.|||||++ |+++|
T Consensus 12 l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d~~-gnl~a~~~g~~~---~~~ill~~H~Dtv~~~v~~---i~~~G 84 (349)
T 2gre_A 12 IKELVSIPSPSGNTAKIINFIENYVSEWNVETKRNNK-GALILTVKGKND---AQHRLLTAHVDTLGAMVKE---IKPDG 84 (349)
T ss_dssp HHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEECSS-SCEEEEECCSEE---EEEEEEEEECCBCEEEEEE---ECTTS
T ss_pred HHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEecC-CcEEEEecCCCC---CceEEEEecccccceeEEE---ECCCC
Confidence 3567777788999988777663 555 6677665 799998755421 2369999999999999997 68999
Q ss_pred eeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecC--CCcccccccccCCCCCCCccce
Q 013257 78 YLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPT--LAIHLDRNVNSDGFKVNTQSHL 155 (447)
Q Consensus 78 ~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~--laiHl~~~~~~~~~~~~~~~~l 155 (447)
|+ ++++||||.+++| ++++|.+++. +| +.. .|+||+ ++||+.++.+ .+.+++++|
T Consensus 85 ~l--~~~~~Gg~~~~~~------~~~~v~i~~~-~g--~~~---------~g~i~~~~~~~h~~~~~~---~~~~~~~~l 141 (349)
T 2gre_A 85 RL--SLSMIGGFRWNSV------EGEYCEIETS-SG--KTY---------TGTILMHQTSVHVYKDAG---EAKRDEKNI 141 (349)
T ss_dssp CE--EEEEESSCCGGGT------TTCEEEEECT-TS--CEE---------EEEEECC----------------------C
T ss_pred eE--EEEecCCCccccc------cCcEEEEEcC-CC--CEE---------EEEEeCCCCCccccchhc---cCCCCHHHc
Confidence 96 4699999666555 6889999876 55 332 699999 9999987652 256778999
Q ss_pred eeeEe--ccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeeccc
Q 013257 156 VPILA--TSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRL 233 (447)
Q Consensus 156 ~idiG--~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kal 233 (447)
+++++ +.+++ +++++||++||+++||+.+.. +++++|.|+++
T Consensus 142 ~~~id~g~~~~~----------------------------~~~~~gi~~gd~v~~~~~~~~--------~~~~~i~gr~~ 185 (349)
T 2gre_A 142 EVRIDERVFSAD----------------------------EVRELGIEVGDFVSFDPRVQI--------TESGYIKSRHL 185 (349)
T ss_dssp EEEESSCCCSHH----------------------------HHHHTTCCTTCEEEECCCCEE--------CTTSEEEESCC
T ss_pred eEEeccCCCCHH----------------------------HHHHcCCCCCCEEEEccccEE--------ccCCeEEEeec
Confidence 86654 44433 678899999999999998765 35789999999
Q ss_pred chhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceE
Q 013257 234 DNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFL 313 (447)
Q Consensus 234 Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~a 313 (447)
||+.||++++++++.+...+ ......++++|+++||+|++|++.. . +.++++
T Consensus 186 D~k~g~a~~l~a~~~l~~~~---~~~~~~i~~~~~~~EE~G~~g~~~~--~-----------------------~~~~~~ 237 (349)
T 2gre_A 186 DDKVSVAILLKLIKRLQDEN---VTLPYTTHFLISNNEEIGYGGNSNI--P-----------------------EETVEY 237 (349)
T ss_dssp TTHHHHHHHHHHHHHHHHHT---CCCSEEEEEEEESCC----CCCCCC--C-----------------------TTEEEE
T ss_pred cchHHHHHHHHHHHHHHhcc---CCCCceEEEEEECcccCCchhhccc--c-----------------------cCCCEE
Confidence 99999999999998764210 0124567889999999999998864 2 356799
Q ss_pred EEEecCCCC-CCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHH
Q 013257 314 VSADMAHAL-HPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPIL 392 (447)
Q Consensus 314 Is~Dv~ha~-~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~ 392 (447)
|++|++++. +|++++ +|+.|+..++ ++..++.+.+.++++|+++|||+|..+.. .+|+++++++
T Consensus 238 i~~D~~~~~~~p~~~~-----------~g~~i~~~~~-~~~~~~~l~~~l~~~a~~~gi~~q~~~~~---ggGsDa~~~~ 302 (349)
T 2gre_A 238 LAVDMGALGDGQASDE-----------YTVSICAKDS-SGPYHYALRKHLVELAKTNHIEYKVDIYP---YYGSDASAAI 302 (349)
T ss_dssp EEECCCCCSCC--CCT-----------TSEEEEEEET-TEECCHHHHHHHHHHHHHHTCCEEEEECS---CC--------
T ss_pred EEEecccccCCCCCCC-----------CceEEEEccC-CCCCCHHHHHHHHHHHHHcCCCcEEeccC---CCCccHHHHH
Confidence 999999997 576431 4788887654 46789999999999999999999986542 3455578888
Q ss_pred hcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHH
Q 013257 393 ASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQE 435 (447)
Q Consensus 393 ~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~ 435 (447)
.++.||||+.+|+|++|||| +|+++.+|++.+++++.+|+.+
T Consensus 303 ~~~~GiPt~~lg~~~~~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 303 RAGFDVKHALIGAGIDSSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp CCSSSCEEEEEEECCBSTTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred HhCCCCcEEEeccCcccccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999 9999999999999999999975
No 15
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=100.00 E-value=3.4e-45 Score=367.80 Aligned_cols=320 Identities=18% Similarity=0.131 Sum_probs=257.2
Q ss_pred hhchhhhcCCCcceeccccceE--Eee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCe
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGY 78 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~ 78 (447)
.++|++..++||+|.++++.+. +++ .+.+|.. ||++|+..|+ .+++|+.||||+|||+||+ |+++||
T Consensus 8 l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~~~~d~~-gnlia~~~~~-----~~~i~l~aH~D~v~~~v~~---i~~~G~ 78 (332)
T 2wyr_A 8 LKKFTQIPGISGYEERIREEIIREIKDFADYKVDAI-GNLIVELGEG-----EERILFMAHMDEIGLLITG---ITDEGK 78 (332)
T ss_dssp HHHHHTSCCBTTCCHHHHHHHHHHHTTTCCCEECTT-CCEEEEEESS-----SEEEEEEEECCBCEEEEEE---ECTTSC
T ss_pred HHHHHcCCCCCCcHHHHHHHHHHHHhhcCcEEEcCC-CeEEEEecCC-----CceEEEEeccCcccEEEEE---ECCCCe
Confidence 3567777888999988888774 555 3455554 7999987652 3469999999999999996 799999
Q ss_pred eEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceeee
Q 013257 79 LEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPI 158 (447)
Q Consensus 79 ~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~id 158 (447)
+ +++++|||++++| ++++|+++++ +| .+ .|+|+.+++|+.++.+ .+.+++++|++|
T Consensus 79 l--~~~~~Gg~~~~~~------~~~~v~v~~~-~g--~~----------~g~i~~~~~h~~~~~~---~~~~~~~~~~id 134 (332)
T 2wyr_A 79 L--RFRKVGGIDDRLL------YGRHVNVVTE-KG--IL----------DGVIGATPPHLSLERD---KSVIPWYDLVID 134 (332)
T ss_dssp E--EEEEESCCCGGGT------TTEEEEEECS-SC--EE----------EEEECCCCTTC--------CCCCCGGGCCBB
T ss_pred E--EEEecCCcChhhc------cCCEEEEEcC-CC--CE----------EEEEcCCCcccChhhh---ccCCChHHEEEE
Confidence 6 4599999877766 6889999986 65 33 6999999999985443 356778999999
Q ss_pred EeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhh
Q 013257 159 LATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCM 238 (447)
Q Consensus 159 iG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g 238 (447)
+|+.+++ +++++ |++||+++||..|.. ++++++.|+++||+.|
T Consensus 135 ~g~~~~~----------------------------~~~~~-i~~Gd~~~~~~~~~~--------~~~~~i~gra~D~k~g 177 (332)
T 2wyr_A 135 IGAESKE----------------------------EALEL-VKPLDFAVFKKHFSV--------LNGKYVSTRGLDDRFG 177 (332)
T ss_dssp CSCSSHH----------------------------HHHHH-CCTTCEEEECCCCEE--------ETTTEEECTTHHHHHH
T ss_pred eCCCCHH----------------------------HHHhh-CCCCCEEEEccccEE--------ecCCeEEcccCCcHHH
Confidence 9998765 46777 999999999976553 3678999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEec
Q 013257 239 SFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADM 318 (447)
Q Consensus 239 ~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~Dv 318 (447)
|++++++++.+.+. .....++++|+++||+|++|++.+... +.++++|++|.
T Consensus 178 ~a~~l~a~~~l~~~-----~~~~~i~~~~~~~EE~G~~G~~~~~~~-----------------------~~~~~~i~~d~ 229 (332)
T 2wyr_A 178 VVALIEAIKDLVDH-----ELEGKVIFAFTVQEEVGLKGAKFLANH-----------------------YYPQYAFAIDS 229 (332)
T ss_dssp HHHHHHHHHTTTTS-----CCSSEEEEEEESCGGGTSHHHHHHTTT-----------------------CCCSEEEEECC
T ss_pred HHHHHHHHHHHhhc-----CCCceEEEEEECccccCcchHHHHhcc-----------------------cCCCEEEEEec
Confidence 99999999887642 124568899999999999998877554 35579999999
Q ss_pred CCCCC-CCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCC
Q 013257 319 AHALH-PNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVG 397 (447)
Q Consensus 319 ~ha~~-P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~G 397 (447)
+++.+ |. +...||+|+.|++.+. .+..++.+.+.++++|++.|+|+|.... ++|+++++++. |
T Consensus 230 ~~~~~~p~--------~~~~lg~G~~i~~~d~-~~~~~~~l~~~l~~~~~~~gi~~~~~~~----~ggtDa~~~~~---G 293 (332)
T 2wyr_A 230 FACCSPLT--------GDVKLGKGPVIRAVDN-SAIYSRDLARKVWSIAEKNGIEIQIGVT----GGGTDASAFQD---R 293 (332)
T ss_dssp EECCSGGG--------TTCCTTSCCEEEEECS-SCBCCHHHHHHHHHHHHHTTCCCEEEEC----SSCCGGGGGTT---T
T ss_pred ccccCCCC--------CceeeCCCCEEEEcCC-CCCCCHHHHHHHHHHHHHcCCCeEEecC----CCCchHHHHHc---C
Confidence 99764 32 3568999999998765 3677999999999999999999998764 33444555543 9
Q ss_pred CcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHh
Q 013257 398 IRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEF 436 (447)
Q Consensus 398 i~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~ 436 (447)
|||+.+|+|.+||||+.|.++++|++.+++++.+++.++
T Consensus 294 iPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~~~~l 332 (332)
T 2wyr_A 294 SKTLALSVPIKYLHSEVETLHLNDLEKLVKLIEALAFEL 332 (332)
T ss_dssp SEEEEEECEEBSCSSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEcCCcCCCCChhhcccHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999998753
No 16
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=8.2e-45 Score=366.64 Aligned_cols=326 Identities=15% Similarity=0.123 Sum_probs=245.1
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGG 77 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G 77 (447)
.++|++..++||+|.++++.+. +++ ++++|+. ||++|+..|++. .+++|+.||||+++|+|++ |+++|
T Consensus 4 l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~~-gnlia~~~g~~~---~~~v~l~aH~D~v~~~v~~---i~~~G 76 (340)
T 2fvg_A 4 LKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDVL-GNLIALKRGRDS---SKKLLVSAHMDEVGFVVSK---IEKDG 76 (340)
T ss_dssp HHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEECTT-SCEEEEECCSEE---EEEEEEEEECCBCEEEEEE---ECTTS
T ss_pred HHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEeCC-CcEEEEecCCCC---CceEEEEeccCcCcEEEEE---ECCCC
Confidence 5788999999999988888774 666 7888886 799998866421 2469999999999999997 68999
Q ss_pred eeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceee
Q 013257 78 YLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVP 157 (447)
Q Consensus 78 ~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~i 157 (447)
|+ +++++|||.+..| .+++|++ + | + .|+||++++|+.++.+ .+.+++++|++
T Consensus 77 ~l--~~~~~Gg~~~~~~------~~~~v~v--~--~---~----------~g~i~~~~~h~~~~~~---~~~~~~~~l~i 128 (340)
T 2fvg_A 77 KV--SFLPVGGVDPRIL------PGKVVQV--K--N---L----------KGVIGYRPIHLQRDEE---NTPPRFENLRI 128 (340)
T ss_dssp CE--EEEEESCCCGGGC------TTCEEEE--T--T---E----------EEEEEECC--------------CCSTTEEE
T ss_pred EE--EEEeeCCcccccc------cCCEEEE--C--c---E----------EEEEcCCCccccchhh---ccCCCcccEEE
Confidence 95 5699999655554 4677777 2 2 3 5999999999987653 35677899999
Q ss_pred eEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhh
Q 013257 158 ILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLC 237 (447)
Q Consensus 158 diG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~ 237 (447)
|+|+.+++ +++++ |++||+++||..+.. + + ++|.|+++||+.
T Consensus 129 d~g~~s~~----------------------------e~~~~-i~~gd~v~~~~~~~~------~--~-~~i~gra~D~k~ 170 (340)
T 2fvg_A 129 DFGFSSAD----------------------------EAKKY-VSIGDYVSFVSDYIE------K--N-GRAVGKAFDDRA 170 (340)
T ss_dssp ECSCSSHH----------------------------HHHTT-CCTTCEEEECCCCEE------E--T-TEEEESCHHHHH
T ss_pred EeCCCCHH----------------------------HHHhh-CCCCCEEEEccCcee------e--c-CEEeeccCccHH
Confidence 99998765 46777 999999999986654 2 3 799999999999
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEe
Q 013257 238 MSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSAD 317 (447)
Q Consensus 238 g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~D 317 (447)
||++++++++.+.+ ....++++++++||+|++|++.+... +.++++|++|
T Consensus 171 g~a~~l~a~~~l~~-------~~~~i~~~~~~~EE~G~~G~~~~~~~-----------------------~~~~~~i~~d 220 (340)
T 2fvg_A 171 GCSVLIDVLESGVS-------PAYDTYFVFTVQEETGLRGSAVVVEQ-----------------------LKPTCAIVVE 220 (340)
T ss_dssp HHHHHHHHHHTCCC-------CSEEEEEEEECCCC-----CHHHHHH-----------------------HCCSEEEEEE
T ss_pred HHHHHHHHHHHhhc-------cCCcEEEEEEcccccchhhhHHHhhc-----------------------cCCCEEEEEe
Confidence 99999999988752 24568899999999999988765331 4678999999
Q ss_pred cCCCC-CCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCC
Q 013257 318 MAHAL-HPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGV 396 (447)
Q Consensus 318 v~ha~-~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~ 396 (447)
++++. +|..+. ..+.+.+|+|++|+..+.. +..|+.+.+.++++|++.++|+|..+. ..+|+++++++.++.
T Consensus 221 ~~~~~~~~G~~~---h~~~~~~G~g~~i~~~~~~-~~~~~~l~~~l~~~a~~~gi~~~~~~~---~~ggtDa~~~~~~~~ 293 (340)
T 2fvg_A 221 TTTAGDNPELEE---RKWATHLGDGPAITFYHRG-YVIPKEIFQTIVDTAKNNDIPFQMKRR---TAGGTDAGRYARTAY 293 (340)
T ss_dssp EEEECSCSTTCC---SSSSCCTTSCCEECSCCSS-SCCCHHHHHHHHHHHHHTTCCCEECCC---C-------------C
T ss_pred cccCCCCCCCcc---ccCCcccCCCcEEEEeCCC-CCCCHHHHHHHHHHHHHcCCCeEEEec---CCCCccHHHHHhhCC
Confidence 99986 455432 2446899999999987653 678999999999999999999998532 133444677877789
Q ss_pred CCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 397 GIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 397 Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
|||++.+|+|.+||||+.|.+++.|++.+++++.+|+.++..
T Consensus 294 GiP~v~~g~~~~~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 294 GVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp CSCEEEEEEEEEESSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred CCcEEEecccccccCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999998764
No 17
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=5.7e-43 Score=351.33 Aligned_cols=287 Identities=15% Similarity=0.091 Sum_probs=230.4
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEc-------cCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTR-------NHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPV 70 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~-------~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~ 70 (447)
.++|++..++||+|.++++.+. +++ ++.+|+ . ||++|+..| . +++|+.||||+|||+|+++
T Consensus 23 l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~-gnlia~~~g-~-----~~ill~aH~DtV~~~v~~i 95 (321)
T 3cpx_A 23 LKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDL-QDCIVLVFG-N-----PRTAVFAHMDSIGFTVSYN 95 (321)
T ss_dssp HHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGG-TTCEEEEES-S-----CSEEEEEECCBCEEEECST
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCC-ccEEEEecC-C-----ceEEEEecCCcCCeEeccc
Confidence 4678888899999998888774 555 555555 4 799998755 2 3599999999999999974
Q ss_pred ccccCCCeeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCC
Q 013257 71 SKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVN 150 (447)
Q Consensus 71 ~~i~~~G~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~ 150 (447)
++ +++||| |++|+ +++|.++++ +| ++ .|+|.+ + +
T Consensus 96 ---~~-------~~~~Gg--~~~~~------~~~v~~~~~-~g--~~----------~gvi~~------~-e-------- 129 (321)
T 3cpx_A 96 ---NH-------LHPIGS--PSAKE------GYRLVGKDS-NG--DI----------EGVLKI------V-D-------- 129 (321)
T ss_dssp ---TB-------EEEESS--CCCCT------TCEEEEEET-TE--EE----------EEEEEC------G-G--------
T ss_pred ---CC-------eEEcCC--hhhcc------cCEEEEEeC-CC--ce----------eeeECC------c-c--------
Confidence 44 489999 78785 677777654 44 22 466643 1 1
Q ss_pred CccceeeeEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEee
Q 013257 151 TQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFS 230 (447)
Q Consensus 151 ~~~~l~idiG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~ 230 (447)
+++++| + +++ |++||+++|+..+.. ++ +++.|
T Consensus 130 --e~~~id--a----------------------------------~~l-v~~Gd~v~~~~~~~~--------~~-g~i~~ 161 (321)
T 3cpx_A 130 --EEWMLE--T----------------------------------DRL-IDRGTEVTFKPDFRE--------EG-DFILT 161 (321)
T ss_dssp --GSCEEE--C----------------------------------SSC-CCTTCEEEECCCCEE--------ET-TEEEC
T ss_pred --HHHHHH--H----------------------------------Hhc-CCCCCEEEeccCcEE--------Ec-CEEEE
Confidence 256676 1 135 899999999975543 24 79999
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhc
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQR 310 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~ 310 (447)
+++|||.||++++++++.+. . ++++||+|||||++|+++|++.+ .+.+++
T Consensus 162 ~~~D~k~G~aa~l~al~~l~----------~-i~~~~t~~EEvG~~Ga~~a~~~~-------------------~~~~~~ 211 (321)
T 3cpx_A 162 PYLDDRLGVWTALELAKTLE----------H-GIIAFTCWEEHGGGSVAYLARWI-------------------YETFHV 211 (321)
T ss_dssp TTHHHHHHHHHHHHHTTTCC----------S-EEEEEESSTTTTCCSHHHHHHHH-------------------HHHHCC
T ss_pred cCCcCHHHHHHHHHHHHHhc----------C-cEEEEECCccCchhcchhhhhcc-------------------ccccCC
Confidence 99999999999999876541 2 77899999999999999876422 123688
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHH
Q 013257 311 SFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGP 390 (447)
Q Consensus 311 s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~ 390 (447)
|++|++|++++.| .+.+|+||+|++.+ ++.+|+.+.+.++++|+++|||+|.++. .+||+|+++
T Consensus 212 ~~~i~~D~~~~~~-----------~~~~~~G~~i~~~~--~~~~~~~l~~~~~~~a~~~gi~~q~~~~---~~GGsD~~~ 275 (321)
T 3cpx_A 212 KQSLICDITWVTE-----------GVEAGKGVAISMRD--RMIPRKKYVNRIIELARQTDIPFQLEVE---GAGASDGRE 275 (321)
T ss_dssp CEEEECCCEECCS-----------SSCTTSCEEEEEES--SSCCCHHHHHHHHHHHTTSSCCEEEEEC---SSCCCHHHH
T ss_pred CEEEEEeCccccC-----------CcccCCCcEEEECC--CCCCCHHHHHHHHHHHHHcCCCEEEEeC---CCCCccHHH
Confidence 9999999999876 14689999999986 6899999999999999999999999763 245555788
Q ss_pred HHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHh
Q 013257 391 ILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEF 436 (447)
Q Consensus 391 i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~ 436 (447)
++.++.||||+++|+|++||||++|+++++|++.+++|+.+|++++
T Consensus 276 ~~~s~~Gipt~~lG~~~~~~Hs~~E~~~~~dl~~~~~ll~~~~~~l 321 (321)
T 3cpx_A 276 LQLSPYPWDWCFIGAPEKDAHTPNECVHKKDIESMVGLYKYLMEKL 321 (321)
T ss_dssp HHHSSSCCBCCBEECEEBSTTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCCCEEEEchhhcccchhhhheeHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999764
No 18
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.96 E-value=1.4e-28 Score=239.69 Aligned_cols=332 Identities=22% Similarity=0.215 Sum_probs=245.8
Q ss_pred hhchhhhcCCCccee-ccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCC
Q 013257 3 RRGVCKQWGINRFQR-EKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKG 76 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~-~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~ 76 (447)
.++|++..++||+|. .+++.+. |++ ++++|+. |||||...|+ ++.+|+.||||++++.+++ +.++
T Consensus 15 L~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D~~-GNlia~~~g~-----~p~lll~~H~Dtvp~~v~~---~~~~ 85 (354)
T 2wzn_A 15 MQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKL-GNVIAHFKGS-----SPRIMVAAHMDKIGVMVNH---IDKD 85 (354)
T ss_dssp HHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEECTT-CCEEEEECCS-----SSEEEEEEECCBCEEEEEE---ECTT
T ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEeCC-CeEEEEECCC-----CceEEEEeccccCCCcCCe---eecC
Confidence 467888899999986 5677774 776 8888887 7999987553 3469999999999999996 6889
Q ss_pred CeeEEeEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCcccee
Q 013257 77 GYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLV 156 (447)
Q Consensus 77 G~~~l~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~ 156 (447)
|++ +....|+.....+ +...+.+... +| .. .+.+..+..+...... .+.+....+.++
T Consensus 86 g~~--~~~~~~~~~~~~~------~~~~~~~~~~-~~--~~----------~~~~~~~~~~~ee~~~-~~~~~~~~~~~~ 143 (354)
T 2wzn_A 86 GYL--HIVPIGGVLPETL------VAQRIRFFTE-KG--ER----------YGVVGVLPPHLRRGQE-DKGSKIDWDQIV 143 (354)
T ss_dssp SCE--EEEEESSCCGGGG------TTCEEEEEET-TE--EE----------EEEECCCCGGGC----------CCGGGCC
T ss_pred Cce--eeccCCCccHHHH------HHHHHHHhhc-cC--Cc----------cceEEEeeeeeEeccc-ccccchhhhhhh
Confidence 995 4578888665543 3455555544 33 11 2333333333222111 122344458899
Q ss_pred eeEeccchhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchh
Q 013257 157 PILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNL 236 (447)
Q Consensus 157 idiG~~s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr 236 (447)
+++|+.+.+ .....++..+..+.+...+... ......++++|++
T Consensus 144 ~~~g~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 187 (354)
T 2wzn_A 144 VDVGASSKE----------------------------EAEEMGFRVGTVGEFAPNFTRL--------NEHRFATPYLDDR 187 (354)
T ss_dssp EECSCSSHH----------------------------HHHHTTCCTTCEEEECCCCEEC--------SSSEEECTTHHHH
T ss_pred hhhcccchh----------------------------hhhccccccceeeeeeeeeEee--------ccccccccccccc
Confidence 999998754 3466778889998887766543 3556889999999
Q ss_pred hhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEE
Q 013257 237 CMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSA 316 (447)
Q Consensus 237 ~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~ 316 (447)
.++..++++++++.. ........++.++++|.++...+.+. ..++..++.
T Consensus 188 ~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~-----------------------~~~~~~~~~ 237 (354)
T 2wzn_A 188 ICLYAMIEAARQLGD-------HEADIYIVGSVQEEVGLRGARVASYA-----------------------INPEVGIAM 237 (354)
T ss_dssp HHHHHHHHHHHHCCC-------CSSEEEEEEESCGGGTSHHHHHHHHH-----------------------HCCSEEEEE
T ss_pred chhhhHHHHHHHHHh-------ccccccccccceeeeeeecccccccc-----------------------cccccceee
Confidence 999999999988753 23446778899999999887766543 345578888
Q ss_pred ecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCCh-HHHHhcC
Q 013257 317 DMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTI-GPILASG 395 (447)
Q Consensus 317 Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~-g~i~~a~ 395 (447)
+..+..++.... .....+++|........ .++.........+.+.++++|..... .+|+|+ +.++.++
T Consensus 238 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ggTDa~~~~~~~ 306 (354)
T 2wzn_A 238 DVTFAKQPHDKG----KIVPELGKGPVMDVGPN----INPKLRAFADEVAKKYEIPLQVEPSP---RPTGTDANVMQINK 306 (354)
T ss_dssp EEEECCCTTSTT----CCCCCTTSCCEEEESTT----SCHHHHHHHHHHHHHTTCCCEEEECC---SCCSSHHHHHHTST
T ss_pred eeeeccccchhh----hhheeeccccccccccc----cCcchhhhhHHHHHHhcCCCceEEEe---cccccHHHHHHHhc
Confidence 888887754332 23457888887776433 47888889999999999999987753 256675 5678899
Q ss_pred CCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhhhhcc
Q 013257 396 VGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAK 442 (447)
Q Consensus 396 ~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~~~~~ 442 (447)
.||||+.+|+|.+||||+.|.++++|++.+++++.+|++++++.||+
T Consensus 307 ~Giptv~~G~g~~~~Ht~~E~v~i~dl~~~~~ll~~~i~~L~~~d~~ 353 (354)
T 2wzn_A 307 EGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDFT 353 (354)
T ss_dssp TCCEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCCCEEEECcccCCCCcccEEEEHHHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999998764
No 19
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.66 E-value=9.5e-17 Score=156.43 Aligned_cols=174 Identities=11% Similarity=0.163 Sum_probs=124.1
Q ss_pred CCceEeecc-cchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcc-cccccCCcchhhHHHHHhhccCCCh
Q 013257 224 KKEFIFSGR-LDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSD-SAQGAGSPAMLDALSRITNSFCSNS 301 (447)
Q Consensus 224 ~~~~i~~ka-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsr-ga~gA~~~~~pd~l~ri~~~~~~~~ 301 (447)
.++++.|++ .||+.||++++++++.+.+.. ......++++++.+||+|++ |+......+.
T Consensus 92 ~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~---~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~--------------- 153 (269)
T 4h2k_A 92 IDGMLYGRGAADMKGSLAAMIVAAEEYVKAN---PNHKGTIALLITSDEEATAKDGTIHVVETLM--------------- 153 (269)
T ss_dssp ETTEEESTTTTTTHHHHHHHHHHHHHHHHHC---TTCSSEEEEEEESCSSSCCTTSHHHHHHHHH---------------
T ss_pred ECCEEEeCCcccChHHHHHHHHHHHHHHHhC---CCCCccEEEEEEeccccCcccCHHHHHHHHH---------------
Confidence 356787765 899999999999887664210 01345788999999999984 7765322110
Q ss_pred HHHHHhhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHh-CCCCEEEEEeec
Q 013257 302 KLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASK-HNLPVQDFVVRN 380 (447)
Q Consensus 302 ~~~~~~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~-~~Ip~Q~~~~r~ 380 (447)
.+..+++++|..|.+....+. +. -...+.|.|. +..+..+.+.+++.|++ .+|++|...
T Consensus 154 ---~~~~~~d~~i~~Ept~~~~~~--~~---i~~g~~G~G~---------~~~~~~l~~~l~~aa~~~~gi~~~~~~--- 213 (269)
T 4h2k_A 154 ---ARDEKITYCMVGEPSSAKNLG--DV---VKNGRRGGGF---------LTKPGKLLDSITSAIEETIGITPKAET--- 213 (269)
T ss_dssp ---HTTCCCCEEEECCCCBSSSTT--SE---EECSCTTCC---------------HHHHHHHHHHHHHHSCCCEEEC---
T ss_pred ---hcCCCCCEEEEECCCCCCcCC--ce---eEEecccccc---------cCCCcHHHHHHHHHHHHHhCCCCEEec---
Confidence 123577899999998764321 10 1123567772 12245799999999998 899999754
Q ss_pred CCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 381 DMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 381 d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
.+|+|++... ++.|+|++.+|+|.+||||+.|.+++.|++.+++++.++++++-+
T Consensus 214 --~gggtDa~~~-~~~g~p~~~~~~~~~~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 214 --GGGTSDGRFI-ALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp --C--CHHHHHH-HTTTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred --CCCCchHHHH-HhhCCCEEEEEeCCCCCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 2466765544 478999999999999999999999999999999999999987643
No 20
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.60 E-value=1.1e-15 Score=148.62 Aligned_cols=171 Identities=12% Similarity=0.158 Sum_probs=121.1
Q ss_pred CceEeec-ccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCc-ccccccCCcchhhHHHHHhhccCCChH
Q 013257 225 KEFIFSG-RLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGS-DSAQGAGSPAMLDALSRITNSFCSNSK 302 (447)
Q Consensus 225 ~~~i~~k-alDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGs-rga~gA~~~~~pd~l~ri~~~~~~~~~ 302 (447)
++++.|+ +.||+.||++++++++.+.+.. ...+..++++++.+||+|+ +|+......+.
T Consensus 93 ~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~---------------- 153 (268)
T 3t68_A 93 DGFLHGRGAADMKGSLACMIVAVERFIAEH---PDHQGSIGFLITSDEEGPFINGTVRVVETLM---------------- 153 (268)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHHC---TTCSSEEEEEEESCTTSSSCCHHHHHHHHHH----------------
T ss_pred CCEEEecCcccchHHHHHHHHHHHHHHHhC---CCCCCcEEEEEEeCCccCcccCHHHHHHHHH----------------
Confidence 4567776 7999999999999887664210 0134568899999999998 47765432110
Q ss_pred HHHHhhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHh-CCCCEEEEEeecC
Q 013257 303 LIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASK-HNLPVQDFVVRND 381 (447)
Q Consensus 303 ~~~~~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~-~~Ip~Q~~~~r~d 381 (447)
.+...++++|.+|.+....+. +. -...+.|. |.+ ..+..+.+.+++.|++ .||++|...
T Consensus 154 --~~~~~~d~~i~~ept~~~~~~--~~---i~~g~~G~-p~~--------~~~~~l~~~l~~a~~~~~gi~~~~~~---- 213 (268)
T 3t68_A 154 --ARNELIDMCIVGEPSSTLAVG--DV---VKNGRRGG-GFL--------TDTGELLAAVVAAVEEVNHQAPALLT---- 213 (268)
T ss_dssp --HTTCCCCEEEECSCCBSSSTT--SE---EEECCGGG-GTS--------CCCCHHHHHHHHHHHHHHSSCCEEES----
T ss_pred --hcCCCCCEEEEeCCCCCccCC--ce---eEEecCCC-ccc--------CCchHHHHHHHHHHHHHhCCCcEEec----
Confidence 113577899999988754221 00 00112232 322 1134588999999998 699999754
Q ss_pred CCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHh
Q 013257 382 MACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEF 436 (447)
Q Consensus 382 ~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~ 436 (447)
.+|+|++... ++.|+|++.+|+|.+|+||+.|.++..|++.+++++.++++++
T Consensus 214 -sgggtD~~~~-~~~g~p~~~~~~~~~~~Hs~~E~v~~~d~~~~~~vl~~~l~~l 266 (268)
T 3t68_A 214 -TGGTSDGRFI-AQMGAQVVELGPVNATIHKVNECVRIADLEKLTDMYQKTLNHL 266 (268)
T ss_dssp -SCCCHHHHHH-HHHTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred -CccccHHHHH-HhcCCCEEEEeeCCCCCCCccccccHHHHHHHHHHHHHHHHHH
Confidence 2466765433 3679999999999999999999999999999999999999875
No 21
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.32 E-value=1.9e-12 Score=127.93 Aligned_cols=168 Identities=11% Similarity=-0.010 Sum_probs=118.8
Q ss_pred eEeecccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHH
Q 013257 227 FIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEK 306 (447)
Q Consensus 227 ~i~~kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~ 306 (447)
.+..++.||+.||++++++++.+.+.+ ..+...++++++++||+|+.|++.....+.+.
T Consensus 110 ~~~~Ga~D~~~g~a~~l~~~~~l~~~~---~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~------------------ 168 (299)
T 1rtq_A 110 SVAPGADDDASGIAAVTEVIRVLSENN---FQPKRSIAFMAYAAEEVGLRGSQDLANQYKSE------------------ 168 (299)
T ss_dssp CCCCCTTTTHHHHHHHHHHHHHHHHTT---CCCSEEEEEEEESCGGGTSHHHHHHHHHHHHT------------------
T ss_pred cccCCCcccHHHHHHHHHHHHHHHHcC---CCCCceEEEEEECCccCCchhHHHHHHhhhhc------------------
Confidence 456788999999999999988775311 01345688999999999999887554332211
Q ss_pred hhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhC--CCCEEEEEeecCCCC
Q 013257 307 AIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKH--NLPVQDFVVRNDMAC 384 (447)
Q Consensus 307 ~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~--~Ip~Q~~~~r~d~~~ 384 (447)
..+-..+|.+|++.+. |.|..+.+... .+++.+..++++++++. +|++|..... .+
T Consensus 169 ~~~~~~~i~~D~~g~~----------------g~~~~i~~~~~---~~~~~l~~~l~~~a~~~~~~i~~~~~~~~---~~ 226 (299)
T 1rtq_A 169 GKNVVSALQLDMTNYK----------------GSAQDVVFITD---YTDSNFTQYLTQLMDEYLPSLTYGFDTCG---YA 226 (299)
T ss_dssp TCEEEEEEECSCCSCC----------------CSSSSEEEECT---TSCHHHHHHHHHHHHHHCTTCCEEEECCS---SC
T ss_pred cccEEEEEEecCCCCC----------------CCCcceEEEeC---CCCchHHHHHHHHHHHhCccCCcccCCCC---CC
Confidence 0122468889986531 11222333211 13788889999999998 8999965321 12
Q ss_pred CCChHHHHhcCCCCcEEEech-----hhhccchHHhhcCHHHH-----HHHHHHHHHHHHHhhhh
Q 013257 385 GSTIGPILASGVGIRTVDVGA-----PQLSMHSIREMCAVDDV-----KHSYEHFKAFFQEFSEL 439 (447)
Q Consensus 385 G~T~g~i~~a~~Gi~t~digi-----P~ryMHS~~E~~~~~Di-----~~~~~ll~~f~~~~~~~ 439 (447)
|++..++. +.|||++.++. |.+|+||+.++++..|. +.+.+++.+|+.++.+.
T Consensus 227 ~sD~~~f~--~~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~ 289 (299)
T 1rtq_A 227 CSDHASWH--NAGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSA 289 (299)
T ss_dssp CSTHHHHH--HTTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcHHHHH--HCCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCC
Confidence 34457774 58999998876 77999999999999997 88999999999887653
No 22
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.28 E-value=8.9e-12 Score=122.27 Aligned_cols=160 Identities=16% Similarity=0.075 Sum_probs=116.9
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhc
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQR 310 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~ 310 (447)
.+.||+.||++++++++.+.+.. ......++++++++||+|+.|++.....+.++.++ +-
T Consensus 94 Ga~D~~~g~a~~l~~~~~l~~~~---~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~-----------------~~ 153 (284)
T 1tkj_A 94 GINDNGSGSAAVLETALAVSRAG---YQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRS-----------------KL 153 (284)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHTT---CCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHHT-----------------TE
T ss_pred CCccChHHHHHHHHHHHHHHhcC---CCCCceEEEEEECCcccCCcCHHHHHhhCccchhh-----------------cE
Confidence 47999999999999988775311 01345688999999999999888665544333111 12
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHH
Q 013257 311 SFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGP 390 (447)
Q Consensus 311 s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~ 390 (447)
..+|.+|+.-..++ |..+ . ..++.+...+++++++.+|++|..... .++++..+
T Consensus 154 ~~~i~~D~~g~~~~----------------~~~~--~-----~~~~~l~~~~~~~~~~~gi~~~~~~~~---~~~sD~~~ 207 (284)
T 1tkj_A 154 AGYLNFDMIGSPNP----------------GYFV--Y-----DDDPVIEKTFKNYFAGLNVPTEIETEG---DGRSDHAP 207 (284)
T ss_dssp EEEEEECCCCCSSC----------------CCEE--C-----CSSHHHHHHHHHHHHHHTCCCEECCSS---TTCSTHHH
T ss_pred EEEEEecCCCCCCC----------------CeEE--e-----cCCHHHHHHHHHHHHHcCCCcccCCCC---CCCCchHH
Confidence 47899998743221 2211 1 136788889999999999999964321 12344567
Q ss_pred HHhcCCCCcEEEechh---------------------hhccchHHhh---cCHHHHHHHHHHHHHHHHHhhh
Q 013257 391 ILASGVGIRTVDVGAP---------------------QLSMHSIREM---CAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 391 i~~a~~Gi~t~digiP---------------------~ryMHS~~E~---~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
+. +.|||++.++.+ .+|+||+..+ ++..|++.+.+++.+++..+.+
T Consensus 208 f~--~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~ 277 (284)
T 1tkj_A 208 FK--NVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS 277 (284)
T ss_dssp HH--HTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HH--HCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 75 589999999988 6899999998 9999999999999999988765
No 23
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.06 E-value=1.9e-10 Score=118.10 Aligned_cols=80 Identities=10% Similarity=0.074 Sum_probs=67.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHH
Q 013257 354 TNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 433 (447)
Q Consensus 354 t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~ 433 (447)
.|+.+.+.+++++++.|+++|... .+|+|++.+. ++.|+|++.+|.+.+++||+.|.++.+|+..+++++..++
T Consensus 328 ~~~~l~~~~~~~~~~~g~~~~~~~-----~~ggtD~~~~-~~~gip~v~~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 401 (417)
T 1fno_A 328 EHPHILDIAQQAMRDCHITPEMKP-----IRGGTDGAQL-SFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIA 401 (417)
T ss_dssp TSTHHHHHHHHHHHHTTCCCBCCC-----BSSCCHHHHH-TTTTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCceecc-----ceeccchHhH-HhcCCCEEEEcCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 577899999999999999988643 2577765544 3469999999999999999999999999999999999999
Q ss_pred HHhhhh
Q 013257 434 QEFSEL 439 (447)
Q Consensus 434 ~~~~~~ 439 (447)
..+...
T Consensus 402 ~~~~~~ 407 (417)
T 1fno_A 402 ELTAKR 407 (417)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 988654
No 24
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.91 E-value=1e-08 Score=105.91 Aligned_cols=161 Identities=12% Similarity=0.001 Sum_probs=112.8
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhc
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQR 310 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~ 310 (447)
.+.||..||++++++++.+.+. ....+++++++++||.|+.|++.....+.++.++++
T Consensus 237 Ga~D~~~G~a~~le~~~~l~~~-----~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~----------------- 294 (421)
T 2ek8_A 237 GANDDASGVAVTLELARVMSKL-----KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRT----------------- 294 (421)
T ss_dssp CTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHE-----------------
T ss_pred CCCCCcHhHHHHHHHHHHHhcc-----CCCceEEEEEECCccccchhHHHHHHhCccchhhcE-----------------
Confidence 7899999999999999887641 134578999999999999999887776655443333
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHH
Q 013257 311 SFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGP 390 (447)
Q Consensus 311 s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~ 390 (447)
..+|.+|+..+ |+++.. ....+.|. .......+...+++.++| |.... .++++..+
T Consensus 295 ~~~in~D~~g~--~~~~~~-----~~~~~~g~------------~~~~~~~~~~~~~~~~~~-~~~~~----~~~SD~~~ 350 (421)
T 2ek8_A 295 IGMFQLDMVGS--KDAGDL-----IMYTIDGK------------KNRVTDLGAAASSRLSGV-LPYGQ----EGRSDHES 350 (421)
T ss_dssp EEEEEECSCCB--TTSCEE-----EEEETTSC------------CCHHHHHHHHHHHHHTSC-CCEEE----CCSSTHHH
T ss_pred EEEEEecccCC--CCCcce-----EEecCCCc------------cccchhhHHHHHHhcCCC-CCCCC----CCCCccHH
Confidence 36799998765 222100 00112221 112233445667777998 54321 23455577
Q ss_pred HHhcCCCCcEEEec-hhh-hccchHHhh---cCHHHHHHHHHHHHHHHHHhhhh
Q 013257 391 ILASGVGIRTVDVG-APQ-LSMHSIREM---CAVDDVKHSYEHFKAFFQEFSEL 439 (447)
Q Consensus 391 i~~a~~Gi~t~dig-iP~-ryMHS~~E~---~~~~Di~~~~~ll~~f~~~~~~~ 439 (447)
++ +.|||++.++ .|. +|+||+..+ ++..+++.+.+++..++..+.+.
T Consensus 351 F~--~~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~ 402 (421)
T 2ek8_A 351 FH--ALGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARP 402 (421)
T ss_dssp HH--TTTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSS
T ss_pred HH--HCCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCC
Confidence 76 6899999886 776 789999998 99999999999999998877653
No 25
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=98.86 E-value=8.6e-09 Score=103.90 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=66.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHH
Q 013257 354 TNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 433 (447)
Q Consensus 354 t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~ 433 (447)
.|+.+.+.+++++++.++++|... .+|+|++.+. ++.|+|++.+|++.+++|++.|.++.+|+..+++++.+++
T Consensus 295 ~~~~l~~~~~~~~~~~g~~~~~~~-----~~g~~D~~~~-~~~gip~~~~g~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 368 (373)
T 3gb0_A 295 DGDHVVEVAKRAAEKIGRTPSLHQ-----SGGGSDANVI-AGHGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAII 368 (373)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEE-----CSSCCHHHHH-HHTTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCceEec-----ccCcchHHHH-HhCCCCEEEecCCCCcCcCCceEEEHHHHHHHHHHHHHHH
Confidence 377899999999999999988754 2577765443 3469999999999999999999999999999999999999
Q ss_pred HHh
Q 013257 434 QEF 436 (447)
Q Consensus 434 ~~~ 436 (447)
++|
T Consensus 369 ~~l 371 (373)
T 3gb0_A 369 EEV 371 (373)
T ss_dssp HHH
T ss_pred HHh
Confidence 887
No 26
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=98.84 E-value=9.9e-09 Score=104.59 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=67.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ 434 (447)
Q Consensus 355 ~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~ 434 (447)
|+.+.+.+++++++.|++++... .+|+|++.+. ++.|+|++.+|++.+++|++.|.++.+|+..+++++..++.
T Consensus 316 d~~l~~~~~~~~~~~g~~~~~~~-----~~g~tD~~~~-~~~giP~~~~g~g~~~~H~~~E~v~~~~l~~~~~~~~~~~~ 389 (396)
T 3rza_A 316 NEAVVKIAQESARNLGLSANTII-----SGGGSDGSII-NTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIK 389 (396)
T ss_dssp TSHHHHHHHHHHHHTTCCCCEEE-----CSSCCHHHHH-GGGTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCceecc-----cceeccHHHH-hhCCCcEEEECCCCCCCCCCcceeEHHHHHHHHHHHHHHHH
Confidence 67899999999999999988654 2577765444 34699999999999999999999999999999999999999
Q ss_pred Hhhh
Q 013257 435 EFSE 438 (447)
Q Consensus 435 ~~~~ 438 (447)
++..
T Consensus 390 ~l~~ 393 (396)
T 3rza_A 390 IVAR 393 (396)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8864
No 27
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=98.49 E-value=8.6e-07 Score=88.77 Aligned_cols=79 Identities=13% Similarity=0.216 Sum_probs=66.1
Q ss_pred ccCHHHHHHHHHHHHh-CCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHH
Q 013257 353 ATNAVTSFVFREVASK-HNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKA 431 (447)
Q Consensus 353 ~t~~~~~~~l~~~a~~-~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~ 431 (447)
..|+.+.+.+++.+++ .|++.|... .+|+|++.+. ++.|+|++.+|.+..++|++.|.++++|+..+++++..
T Consensus 296 ~~~~~l~~~l~~a~~~~~g~~~~~~~-----~~g~tDa~~~-~~~g~~~v~~Gp~~~~~H~~~E~i~~~~l~~~~~i~~~ 369 (377)
T 3isz_A 296 TKPGKLLDSITSAIEETIGITPKAET-----GGGTSDGRFI-ALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHK 369 (377)
T ss_dssp CCTTHHHHHHHHHHHHHHSCCCEEEE-----CSSCCSHHHH-HTTTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeeec-----cCcccHHHHH-HHcCCCEEEECCCCCcccCCCCcEEHHHHHHHHHHHHH
Confidence 3467888999998888 799998754 2567765543 45699999999999999999999999999999999999
Q ss_pred HHHHhh
Q 013257 432 FFQEFS 437 (447)
Q Consensus 432 f~~~~~ 437 (447)
++.++-
T Consensus 370 ~i~~ll 375 (377)
T 3isz_A 370 MLVNLL 375 (377)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998764
No 28
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.35 E-value=2.7e-07 Score=93.69 Aligned_cols=77 Identities=10% Similarity=0.031 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEE-eecCCCCCCChHHHHhcCCCCcEE-Eechhhhccch-HHhhcCHHHHHHHHHHHHHH
Q 013257 356 AVTSFVFREVASKHNLPVQDFV-VRNDMACGSTIGPILASGVGIRTV-DVGAPQLSMHS-IREMCAVDDVKHSYEHFKAF 432 (447)
Q Consensus 356 ~~~~~~l~~~a~~~~Ip~Q~~~-~r~d~~~G~T~g~i~~a~~Gi~t~-digiP~ryMHS-~~E~~~~~Di~~~~~ll~~f 432 (447)
+.+.+.+++++++.|++++... . +|+|++.+. ...|+|++ .+|.+..++|+ +.|.++.+|+...++++..+
T Consensus 312 ~~l~~~~~~~~~~~g~~~~~~~~~-----~g~tD~~~~-~~~giP~~~~~G~~~~~~H~~~~E~i~~~~l~~~~~~~~~~ 385 (393)
T 1cg2_A 312 KKLVDKAVAYYKEAGGTLGVEERT-----GGGTDAAYA-ALSGKPVIESLGLPGFGYHSDKAEYVDISAIPRRLYMAARL 385 (393)
T ss_dssp HHHHHHHHHHHHHTTCCCEEESCB-----SCCCTHHHH-GGGSCCEECCCSCEEECTTSSSCCEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccCC-----CcccHHHHH-HhCCCCEEEeCCCCCCCccCCCcceEEehhHHHHHHHHHHH
Confidence 5688899999999999877542 2 466765544 34689999 48877788999 99999999999999999999
Q ss_pred HHHhhh
Q 013257 433 FQEFSE 438 (447)
Q Consensus 433 ~~~~~~ 438 (447)
+.++..
T Consensus 386 ~~~l~~ 391 (393)
T 1cg2_A 386 IMDLGA 391 (393)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 988753
No 29
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=98.23 E-value=4.6e-06 Score=85.95 Aligned_cols=80 Identities=19% Similarity=0.127 Sum_probs=65.2
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHH
Q 013257 353 ATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAF 432 (447)
Q Consensus 353 ~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f 432 (447)
..|+.+.+.+++.+++.|++.+... .+|+|++.+. ++.|+|++.+|++...+|++.|.++.+|+...++++..+
T Consensus 353 ~~d~~l~~~~~~a~~~~G~~~~~~~-----~~ggtD~~~~-~~~GiP~~~~g~g~~~~H~~~E~i~~~~l~~~~~~~~~~ 426 (434)
T 3ife_A 353 EPVREIVDIAYEAMKSLNIEPNIHP-----IRGGTDGSQL-SYMGLPTPNIFTGGENYHGKFEYVSVDVMEKAVQVIIEI 426 (434)
T ss_dssp GGGTHHHHHHHHHHHHTTCCCEECC-----BSSCCHHHHH-HHTTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEee-----cccCchHHHH-hhCCCcEEEeCCCCCCCcCCceeecHHHHHHHHHHHHHH
Confidence 3466788888888888888766432 2577765554 346999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 013257 433 FQEFSE 438 (447)
Q Consensus 433 ~~~~~~ 438 (447)
+..+.+
T Consensus 427 l~~la~ 432 (434)
T 3ife_A 427 ARRFEE 432 (434)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 988864
No 30
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.21 E-value=1.3e-06 Score=90.95 Aligned_cols=164 Identities=11% Similarity=0.087 Sum_probs=102.9
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhc
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQR 310 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~ 310 (447)
.+.||..||++++++++.+.+.+ ..+..++.+++++.||.|+.|++.-....... + -+-
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~---~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~~-~-----------------~~~ 324 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLP---QKPERTIRVVLYAAEELGLLGGKTYAKEHEAE-L-----------------EKH 324 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSS---SCCSEEEEEEEESCGGGTSHHHHHHHHHTGGG-G-----------------GGE
T ss_pred CCccchHHHHHHHHHHHHHHhcC---CCCCCeEEEEEECCcccCCcCHHHHHHhhHhh-h-----------------hce
Confidence 68899999999999988775321 12356788999999999998877544433221 0 011
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHH
Q 013257 311 SFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGP 390 (447)
Q Consensus 311 s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~ 390 (447)
.++|-+|+ |.|+...+.... ......+.+.+.+.++..+++.+.. + ..+|++-.+
T Consensus 325 ~~~~n~D~--------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~--~--~~~~SD~~~ 379 (444)
T 3iib_A 325 YIAAESDF--------------------GAGPIYQIDWRV-ADTAHSPVINAMKVAEPLGVAAGNN--K--ASGGPDVSM 379 (444)
T ss_dssp EEEEECCS--------------------TTCCEEEEEEEC-CHHHHHHHHHHGGGGGGGTCEECCS--C--CCCCGGGTT
T ss_pred eEEEECcC--------------------CCCcceEEEeec-ChhhHHHHHHHHHHHhhcCCccccC--C--CCCCCccHH
Confidence 23444453 112222221111 1112344444555556667765411 1 123333456
Q ss_pred HHhcCCCCcEEEech-hhh---ccchH---HhhcCHHHHHHHHHHHHHHHHHhhhhhcc
Q 013257 391 ILASGVGIRTVDVGA-PQL---SMHSI---REMCAVDDVKHSYEHFKAFFQEFSELDAK 442 (447)
Q Consensus 391 i~~a~~Gi~t~digi-P~r---yMHS~---~E~~~~~Di~~~~~ll~~f~~~~~~~~~~ 442 (447)
+. +.|||++.+.. +.+ |.||+ .+.++..+++...+++..++..+.+.+..
T Consensus 380 f~--~~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 380 LP--ALGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp SG--GGTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HH--HCCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 54 57999999976 443 79999 88999999999999999999888776543
No 31
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=98.12 E-value=5.7e-06 Score=84.82 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASK-HNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 433 (447)
Q Consensus 355 ~~~~~~~l~~~a~~-~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~ 433 (447)
|..+.+.+++.+++ .|++.+.... +|+|++.+.....|+|++.+|.....+|++.|.++.+|+...++++..++
T Consensus 350 d~~~~~~~~~a~~~~~G~~~~~~~~-----~g~~D~~~~~~~~giP~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~i 424 (433)
T 3pfo_A 350 GGVAEDVLTAAHKAAFNAPLDARLS-----TAVNDTRYYSVDYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFV 424 (433)
T ss_dssp TCHHHHHHHHHHHHHHSSCCCEEEE-----SSCCTHHHHHHTTCCCEEECCCCEECTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCceeee-----eeeccHHHHHhhCCCCEEEECCCCccCCCCCceEEHHHHHHHHHHHHHHH
Confidence 45566667666665 6777765432 46776555434479999999998899999999999999999999999999
Q ss_pred HHhhhh
Q 013257 434 QEFSEL 439 (447)
Q Consensus 434 ~~~~~~ 439 (447)
.+|-..
T Consensus 425 ~~~~~~ 430 (433)
T 3pfo_A 425 AEWCGL 430 (433)
T ss_dssp HHHHCE
T ss_pred HHHhcc
Confidence 887553
No 32
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=98.10 E-value=9.1e-06 Score=81.52 Aligned_cols=50 Identities=24% Similarity=0.365 Sum_probs=41.7
Q ss_pred CCCChHHHHhcCCCCcEEEechhh-hccchHHhhcCHHHHHHHHHHHHHHHH
Q 013257 384 CGSTIGPILASGVGIRTVDVGAPQ-LSMHSIREMCAVDDVKHSYEHFKAFFQ 434 (447)
Q Consensus 384 ~G~T~g~i~~a~~Gi~t~digiP~-ryMHS~~E~~~~~Di~~~~~ll~~f~~ 434 (447)
+|+|++.+. ++.|+|++.+|... ..+|++.|.++.+|+...++++..+++
T Consensus 318 ~ggtD~~~~-~~~giP~~~~Gpg~~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 318 FGWTDVSRF-SAMGIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp CSCCTHHHH-HTTTCCEEEECSSCSSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred ccccchHHH-hhCCCCEEEECCCChhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 466765544 46799999998764 589999999999999999999999876
No 33
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=98.10 E-value=5.6e-06 Score=82.19 Aligned_cols=159 Identities=13% Similarity=0.018 Sum_probs=103.1
Q ss_pred eEeecccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCc-------------ccccccCCcchhhHHHHH
Q 013257 227 FIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGS-------------DSAQGAGSPAMLDALSRI 293 (447)
Q Consensus 227 ~i~~kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGs-------------rga~gA~~~~~pd~l~ri 293 (447)
.+.-.+.||..||++++++++.+.+. .+...+.+++++.||.|+ .|++.-+......
T Consensus 120 ~~~~Ga~D~~sGva~~Le~ar~l~~~-----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~----- 189 (309)
T 3tc8_A 120 TPLDGADDGGSGVGALLEIARQIGQK-----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVP----- 189 (309)
T ss_dssp SCCCCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSST-----
T ss_pred ccccCcccchHhHHHHHHHHHHHHhC-----CCCCcEEEEEECccccccccccccccccccchhHHHHHhCCCcc-----
Confidence 34467899999999999998877531 135668899999999998 6655432221110
Q ss_pred hhccCCChHHHHHhhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCC-
Q 013257 294 TNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLP- 372 (447)
Q Consensus 294 ~~~~~~~~~~~~~~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip- 372 (447)
..+-..+|.+|+.-+.+|.+ ...|. +..+ .+.+...+.+.|++.+++
T Consensus 190 -------------~~~~~~~inlD~~G~~~~~~-----------~~~~~------~~~~--~~~l~~~~~~~a~~~g~~~ 237 (309)
T 3tc8_A 190 -------------NYTAEYGILLDMVGGKNATF-----------FKEQQ------SLRA--AAPIVEMVWSAARDLGYGK 237 (309)
T ss_dssp -------------TCCCSEEEEEESCCBTTCCE-----------EECHH------HHHH--HHHHHHHHHHHHHHHTCTT
T ss_pred -------------ccceEEEEEecccCCCCCce-----------eeccc------ccch--HHHHHHHHHHHHHHcCCcc
Confidence 01234689999887655422 11121 0001 135667777788888875
Q ss_pred -EEEEEeecCCCCC-CChHHHHhcC-CCCcEEEechhh---------hccchHH---hhcCHHHHHHHHHHHHHHHH
Q 013257 373 -VQDFVVRNDMACG-STIGPILASG-VGIRTVDVGAPQ---------LSMHSIR---EMCAVDDVKHSYEHFKAFFQ 434 (447)
Q Consensus 373 -~Q~~~~r~d~~~G-~T~g~i~~a~-~Gi~t~digiP~---------ryMHS~~---E~~~~~Di~~~~~ll~~f~~ 434 (447)
+|... +| ....-+...+ .|||++++ +|. .+-||+. +.++...+++..+++.+++-
T Consensus 238 ~f~~~~------~g~~~sDh~~f~~~~GiP~~~l-i~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~vy 307 (309)
T 3tc8_A 238 YFINAA------GGAITDDHQYVISGRNIPSIDI-INYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVIY 307 (309)
T ss_dssp TEEEEE------CCCCCCHHHHHHHHHCCCEEEE-EBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHH
T ss_pred eeccCC------CCCCCCccHHHHhcCCCCEEEE-ecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHh
Confidence 33321 22 1223333355 79999999 343 6899999 89999999999999988864
No 34
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=97.93 E-value=7.6e-05 Score=77.94 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=61.8
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEEeecCCCCCCCh-HHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASK-HNLPVQDFVVRNDMACGSTI-GPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAF 432 (447)
Q Consensus 355 ~~~~~~~l~~~a~~-~~Ip~Q~~~~r~d~~~G~T~-g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f 432 (447)
|+.+.+.+++.+++ .|.+...... +|||. +.+.....|+|++.+|.....+|++.|-++.+|+..+++++..+
T Consensus 406 d~~l~~~~~~~~~~~~G~~~~~~~~-----~gg~D~~~~~~~~pg~~~v~~Gp~~~~~H~~~E~v~~~~l~~~~~~~~~~ 480 (487)
T 2qyv_A 406 HSDILDLTKTIYAQVLGTDPEIKVI-----HAGLECGLLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGI 480 (487)
T ss_dssp CCHHHHHHHHHHHHHHSSCCEEEEE-----SSCCTHHHHHHHCTTSEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEE-----eccccHHHHHhhCCCCCEEEECCCCCCCCCCCceeEHHHHHHHHHHHHHH
Confidence 66788888888887 6776654432 46664 55554456999999997677799999999999999999999999
Q ss_pred HHHhh
Q 013257 433 FQEFS 437 (447)
Q Consensus 433 ~~~~~ 437 (447)
+.++.
T Consensus 481 l~~l~ 485 (487)
T 2qyv_A 481 LAHIP 485 (487)
T ss_dssp HHHCC
T ss_pred HHHHh
Confidence 98764
No 35
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=97.92 E-value=8.8e-05 Score=77.84 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=64.6
Q ss_pred cCHHHHHHHHHHHHhC-CCCEEEEEeecCCCCCCChHHHHhc-CCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHH
Q 013257 354 TNAVTSFVFREVASKH-NLPVQDFVVRNDMACGSTIGPILAS-GVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKA 431 (447)
Q Consensus 354 t~~~~~~~l~~~a~~~-~Ip~Q~~~~r~d~~~G~T~g~i~~a-~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~ 431 (447)
.|..+.+.+.+.+++. |.+.+.... +|||.+.+... -.|+|++.+|.-...+|+|.|-++++|++.+.+++.+
T Consensus 407 ~d~~lv~~l~~a~~~~~G~~~~~~~~-----ggg~d~~~~~~~~p~~~~v~fGp~~~~~H~p~E~v~i~~l~~~~~~l~~ 481 (490)
T 3mru_A 407 ADSEIMAIFRDMYEGIYGHKPNIMVI-----HAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVA 481 (490)
T ss_dssp TTCHHHHHHHHHHHTTSSSCCCCEEE-----SSCCHHHHTTSSCTTCEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCeEEEE-----EecHHHHHHHHhCCCCCEEEECCCCCCCCCCCccccHHHHHHHHHHHHH
Confidence 4567888888888887 887776553 56776544323 2389999999988899999999999999999999999
Q ss_pred HHHHhhh
Q 013257 432 FFQEFSE 438 (447)
Q Consensus 432 f~~~~~~ 438 (447)
+++++.+
T Consensus 482 ~l~~l~~ 488 (490)
T 3mru_A 482 LLEAIPE 488 (490)
T ss_dssp HHHHCCC
T ss_pred HHHHhhh
Confidence 9998754
No 36
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=97.75 E-value=2.7e-05 Score=78.86 Aligned_cols=79 Identities=11% Similarity=0.223 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHhC-CCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASKH-NLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 433 (447)
Q Consensus 355 ~~~~~~~l~~~a~~~-~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~ 433 (447)
++.+.+.+++.+++. |++.+... .+|+|++.+. ++.|+|++.+|..-..+|++.|-++++|+..+++++..++
T Consensus 301 ~~~l~~~~~~~~~~~~g~~~~~~~-----~~g~~D~~~~-~~~~~P~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~l 374 (393)
T 1vgy_A 301 AGKLTDVARAAIAETCGIEAELST-----TGGTSDGRFI-KAMAQELIELGPSNATIHQINENVRLNDIPKLSAVYEGIL 374 (393)
T ss_dssp SSHHHHHHHHHHHHHHSSCCEEEC-----CSCCCTHHHH-GGGEEEEEECCSBCTTTTSTTCEEETTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCceEec-----CCccchHHHH-HhCCCCEEEECCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 444555555555552 55544322 2466765554 3468999999988888999999999999999999999999
Q ss_pred HHhhhh
Q 013257 434 QEFSEL 439 (447)
Q Consensus 434 ~~~~~~ 439 (447)
.++...
T Consensus 375 ~~l~~~ 380 (393)
T 1vgy_A 375 VRLLAG 380 (393)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 888543
No 37
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=97.43 E-value=0.00033 Score=69.54 Aligned_cols=158 Identities=13% Similarity=0.034 Sum_probs=79.3
Q ss_pred eEeecccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCc--------------ccccccCCcchhhHHHH
Q 013257 227 FIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGS--------------DSAQGAGSPAMLDALSR 292 (447)
Q Consensus 227 ~i~~kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGs--------------rga~gA~~~~~pd~l~r 292 (447)
.+.-.+.||..||++++++++.+.+. .+...+.+++++.||.|+ .|++--+......
T Consensus 122 ~~~~GA~D~~sGva~~Le~ar~l~~~-----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~---- 192 (314)
T 3gux_A 122 TPILGVNDGASGVGVLLEIARQIQKE-----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQ---- 192 (314)
T ss_dssp --------CHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSST----
T ss_pred cccCCCcccHHHHHHHHHHHHHHHhC-----CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCccc----
Confidence 45567899999999999998877531 135568899999999998 5554332221100
Q ss_pred HhhccCCChHHHHHhhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCC
Q 013257 293 ITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLP 372 (447)
Q Consensus 293 i~~~~~~~~~~~~~~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip 372 (447)
..+..++|.+|+.-+.+|.+ .-.|+ . .-..+.+...+.+.++..+.+
T Consensus 193 --------------~~~~~~~inlDm~G~~~~~~-----------~~~g~------~--~~~~~~l~~~~~~~~~~~g~~ 239 (314)
T 3gux_A 193 --------------NYNARYGILLDMVGGKDATF-----------YYEGY------S--ARTARSEMKKIWKKAHELGYG 239 (314)
T ss_dssp --------------TCCCSEEEEEESCCBTTCCE-----------EECTT------H--HHHCHHHHHHHHHHHHHHTCT
T ss_pred --------------ccceeEEEEEeccCCCCCce-----------eeecc------c--cccHHHHHHHHHHHHHHcCCc
Confidence 02334689999887655422 01121 0 011256677777788887764
Q ss_pred --EEEEEeecCCCCC-CChHHHHhcC-CCCcEEEechhh----------hccchHHhhcCHHH---HHHHHHHHHHHH
Q 013257 373 --VQDFVVRNDMACG-STIGPILASG-VGIRTVDVGAPQ----------LSMHSIREMCAVDD---VKHSYEHFKAFF 433 (447)
Q Consensus 373 --~Q~~~~r~d~~~G-~T~g~i~~a~-~Gi~t~digiP~----------ryMHS~~E~~~~~D---i~~~~~ll~~f~ 433 (447)
++... +| ....-+...+ .|||++++ +|. .+-|++.-+++.-| +....+++.+++
T Consensus 240 ~~f~~~~------~~~~~sDh~pF~~~~GiP~l~~-i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~~ 310 (314)
T 3gux_A 240 KYFVKED------GGETVDDHIYVNKLARIPCVDI-INYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDVI 310 (314)
T ss_dssp TTEEEEE------CCCCCCHHHHHHHHSCCCEEEE-EBCC--------------------CBCHHHHHHHHHHHHHHH
T ss_pred ccccccc------CCCCCCccHHHHhcCCCceEEE-ecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHHH
Confidence 33221 22 1222233345 79999999 332 56899876555544 455555555554
No 38
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=97.35 E-value=0.00055 Score=54.73 Aligned_cols=76 Identities=11% Similarity=0.154 Sum_probs=62.1
Q ss_pred HHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhh---hccchHHhhcCHHHHHHHHHHHHHHHH
Q 013257 358 TSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQ---LSMHSIREMCAVDDVKHSYEHFKAFFQ 434 (447)
Q Consensus 358 ~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~---ryMHS~~E~~~~~Di~~~~~ll~~f~~ 434 (447)
+.+.+.+.+++.|.+...... +|+|++.+.. +.|+|++..|.-. ..+|++.|-++++|+..+++++..++.
T Consensus 3 ~v~~l~~a~~~~g~~~~~~~~-----~g~TDar~~~-~~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~~~iy~~~i~ 76 (88)
T 1q7l_B 3 WWAAFSRVCKDMNLTLEPEIM-----PAAGDNRYIR-AVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLP 76 (88)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC-----CSCSHHHHHH-HTTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeEeeee-----ceeCcHHHHH-HcCCCEEEECCCCCCcccccCCCCeeEHHHHHHHHHHHHHHHH
Confidence 566777888888988887663 6888877654 4599999998743 469999999999999999999999999
Q ss_pred Hhhhh
Q 013257 435 EFSEL 439 (447)
Q Consensus 435 ~~~~~ 439 (447)
++...
T Consensus 77 ~~~~~ 81 (88)
T 1q7l_B 77 ALASV 81 (88)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 88654
No 39
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=97.02 E-value=0.00069 Score=67.54 Aligned_cols=48 Identities=19% Similarity=0.061 Sum_probs=34.5
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccc
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSA 278 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga 278 (447)
.|-||-+||++++|+++.+.+...+...+..++.+++++.||.|+.+.
T Consensus 126 GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~ 173 (330)
T 4fai_A 126 GATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWG 173 (330)
T ss_dssp CTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCB
T ss_pred CCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccccccc
Confidence 789999999999998876531000001235578899999999998654
No 40
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=96.83 E-value=0.001 Score=67.66 Aligned_cols=78 Identities=10% Similarity=-0.051 Sum_probs=64.4
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhh--ccchHHhhcCHHHHHHHHHHHH
Q 013257 353 ATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQL--SMHSIREMCAVDDVKHSYEHFK 430 (447)
Q Consensus 353 ~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~r--yMHS~~E~~~~~Di~~~~~ll~ 430 (447)
..|+.+.+.+++.+++.+++++.... +|+|+..+. ++. +|++.+.+|.+ ++|++.|.++.+|+..+++++.
T Consensus 327 ~~d~~l~~~~~~a~~~~g~~~~~~~~-----~ggtD~~~~-~~~-iP~~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 399 (408)
T 3n5f_A 327 LCSDEVKRAAEAACQKLGYPSFWLPS-----GAAHDSVQL-API-CPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLY 399 (408)
T ss_dssp ECCHHHHHHHHHHHHHHTCCCCEEEE-----SSCCTTTTT-TTT-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccCCC-----cCchHHHHH-HHH-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 45789999999999999998875442 467764443 333 99999999988 8999999999999999999999
Q ss_pred HHHHHhh
Q 013257 431 AFFQEFS 437 (447)
Q Consensus 431 ~f~~~~~ 437 (447)
.++.++.
T Consensus 400 ~~~~~l~ 406 (408)
T 3n5f_A 400 HTVWQLA 406 (408)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998774
No 41
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=96.78 E-value=0.0086 Score=58.83 Aligned_cols=173 Identities=12% Similarity=-0.060 Sum_probs=92.8
Q ss_pred ecccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhh
Q 013257 230 SGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQ 309 (447)
Q Consensus 230 ~kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~ 309 (447)
-.|-||-+||+++||+++.+.+. .+...+.++|++.||.|+.|..++........+-.-....... ....+
T Consensus 123 ~GA~D~aSG~a~lLE~ar~l~~~-----~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~----~~~~~ 193 (309)
T 4fuu_A 123 LGANDGASGVGALLEIARLVNQQ-----QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPH----VQGYN 193 (309)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCS----STTCC
T ss_pred CCcccCchhHHHHHHHHHHHhhc-----CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhccc----ccCcc
Confidence 35789999999999998877532 1355688999999999988776654432221110000000000 00112
Q ss_pred cceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCCh-
Q 013257 310 RSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTI- 388 (447)
Q Consensus 310 ~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~- 388 (447)
-..+|.+|+.-+.+|. +..... .....+.+...+.+.+.+.+.......... ..++++
T Consensus 194 i~~~inlDmvG~~~~~------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~sDh 252 (309)
T 4fuu_A 194 ARFGILLDMVGGENSV------------------FLKEGY-SEEFAPDINKKVWKAAKKAGYGKTFIDERG--DTITDDH 252 (309)
T ss_dssp CSEEEEECSCCBTTCC------------------EEECHH-HHHHCHHHHHHHHHHHHHTTCTTTEEEEEC--CCCCCHH
T ss_pred eEEEEeeeccCCCCCc------------------eEeecC-chhhhHHHHHHHHHHHHhcCCcccccccCC--CCCCCCh
Confidence 3457888875433321 111000 112245667777788888765433211111 122333
Q ss_pred HHHHhcCCCCcEEEech-----h-hhccchHHhhcCHHHHH---HHHHHHHHHH
Q 013257 389 GPILASGVGIRTVDVGA-----P-QLSMHSIREMCAVDDVK---HSYEHFKAFF 433 (447)
Q Consensus 389 g~i~~a~~Gi~t~digi-----P-~ryMHS~~E~~~~~Di~---~~~~ll~~f~ 433 (447)
.++. ...|||++++.- | -.+-||+.-+++.-|.+ ...+++.+++
T Consensus 253 ~~F~-~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~l 305 (309)
T 4fuu_A 253 LFIN-RLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVI 305 (309)
T ss_dssp HHHH-HHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred HHHH-hcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHH
Confidence 3442 346999999831 1 12459988766655554 4444454444
No 42
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=96.76 E-value=0.0022 Score=63.13 Aligned_cols=48 Identities=17% Similarity=-0.001 Sum_probs=33.6
Q ss_pred ecccchhhhHHHHHHHHHhccCC--CCCCCCCCceEEEEEEeccccCccc
Q 013257 230 SGRLDNLCMSFCSLKALIDSTSS--EGDLEDEIGVRMVALFDHEEVGSDS 277 (447)
Q Consensus 230 ~kalDnr~g~~~~leal~~~~~~--~~~~~~~~~~~~~~~t~qEEVGsrg 277 (447)
-.|-||-+||+++||+++.+.+. ......++.++.+++++.||.|..+
T Consensus 99 ~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~ 148 (312)
T 4f9u_A 99 VGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEW 148 (312)
T ss_dssp CCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSC
T ss_pred CCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccC
Confidence 36899999999999988765310 0000123567899999999999443
No 43
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=96.76 E-value=0.0021 Score=64.31 Aligned_cols=172 Identities=13% Similarity=0.071 Sum_probs=94.1
Q ss_pred ecccchhhhHHHHHHHHHhccCCCCC--CCCCCceEEEEEEecccc--------CcccccccCCcchhhHHHHHhhccCC
Q 013257 230 SGRLDNLCMSFCSLKALIDSTSSEGD--LEDEIGVRMVALFDHEEV--------GSDSAQGAGSPAMLDALSRITNSFCS 299 (447)
Q Consensus 230 ~kalDnr~g~~~~leal~~~~~~~~~--~~~~~~~~~~~~t~qEEV--------Gsrga~gA~~~~~pd~l~ri~~~~~~ 299 (447)
-.+.||-+||++++|+++.+.+.... ...++..+.+++++.||. |+.|++.-+..+..+ ....
T Consensus 130 ~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~-------~~~~ 202 (330)
T 3pb6_X 130 VGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESI-------PHSP 202 (330)
T ss_dssp CCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHS-------BCSS
T ss_pred CCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhc-------CCcc
Confidence 47889999999999998876420000 001355688999999999 887776543322110 0000
Q ss_pred ChHHHHHhhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHH---HHHHHHHHhCCC----C
Q 013257 300 NSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTS---FVFREVASKHNL----P 372 (447)
Q Consensus 300 ~~~~~~~~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~---~~l~~~a~~~~I----p 372 (447)
.. ...-+-..+|.+|+.-+.+|.++.. . .....+. ..+.+.+.+.+. |
T Consensus 203 ~~---~~~~~i~~~inlDmiG~~~~~~~~~-----------~-----------~~t~~~~~~l~~i~~~~~~~g~~~~~p 257 (330)
T 3pb6_X 203 GP---TRIQAIELFMLLDLLGAPNPTFYSH-----------F-----------PRTVRWFHRLRSIEKRLHRLNLLQSHP 257 (330)
T ss_dssp CS---BTTTTEEEEEEEESCSSSSCCBCCC-----------C-----------GGGHHHHHHHHHHHHHHHHTTCCSSCC
T ss_pred cc---chhhCeEEEEeccCCCCCCCCceee-----------c-----------CcchHHHHHHHHHHHHHHHcCccccCC
Confidence 00 0001224689999987766543210 0 0111222 223333444443 1
Q ss_pred --EEEEEeecCCCC-CCC-hHHHHhcCCCCcEEEech-hh-hccchHHh---hcCHHHHHHHHHHHHHHHHHh
Q 013257 373 --VQDFVVRNDMAC-GST-IGPILASGVGIRTVDVGA-PQ-LSMHSIRE---MCAVDDVKHSYEHFKAFFQEF 436 (447)
Q Consensus 373 --~Q~~~~r~d~~~-G~T-~g~i~~a~~Gi~t~digi-P~-ryMHS~~E---~~~~~Di~~~~~ll~~f~~~~ 436 (447)
.+++.. .+..+ +.+ =.|+. +.|||++.+.- |. .+-|++.- .++...+.+..+++.+|+.+|
T Consensus 258 ~~~~~f~~-~~~~~~~~SDH~pF~--~~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 258 QEVMYFQP-GEPFGSVEDDHIPFL--RRGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEY 327 (330)
T ss_dssp SSCSSBCS-SCSSCCCSCTTHHHH--TTTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccccc-cccCCCCCCchHhHH--HCCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 122211 11112 222 25554 58999999863 33 45699864 567777778888888887765
No 44
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=96.68 E-value=0.0028 Score=58.16 Aligned_cols=56 Identities=18% Similarity=0.181 Sum_probs=41.9
Q ss_pred CceEeecc-cchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccC-cccccccCC
Q 013257 225 KEFIFSGR-LDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVG-SDSAQGAGS 283 (447)
Q Consensus 225 ~~~i~~ka-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVG-srga~gA~~ 283 (447)
++++.|++ .||+.|+++++++++.+.+.. ...+..++++|+.+||+| ++|+.....
T Consensus 103 ~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~g~~~Ga~~~~~ 160 (198)
T 1q7l_A 103 EGYIYARGAQDMKCVSIQYLEAVRRLKVEG---HRFPRTIHMTFVPDEEVGGHQGMELFVQ 160 (198)
T ss_dssp TSEEECTTTTTTHHHHHHHHHHHHHHHHTT---CCCSSCEEEEEESCGGGTSTTTHHHHTT
T ss_pred CCEEEeCcchhchHHHHHHHHHHHHHHHcC---CCCCCCEEEEEEcccccCccccHHHHHH
Confidence 44677887 999999999999988765311 013456899999999998 688765543
No 45
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=96.67 E-value=0.0042 Score=63.15 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=65.3
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhh--ccchHHhhcCHHHHHHHHHHHH
Q 013257 353 ATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQL--SMHSIREMCAVDDVKHSYEHFK 430 (447)
Q Consensus 353 ~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~r--yMHS~~E~~~~~Di~~~~~ll~ 430 (447)
..|+.+.+.+++++++.|++++.... +|+|++.+.. +. +|++.+.+|.. ++|++.|.++.+|+...++++.
T Consensus 331 ~~~~~l~~~~~~~~~~~g~~~~~~~~-----~ggtD~~~~~-~~-~p~~~~~~p~~~~~~H~~~E~i~~~~l~~~~~~~~ 403 (423)
T 1z2l_A 331 PMNKELVATLTELCEREKLNYRVMHS-----GAGHDAQIFA-PR-VPTCMIFIPSINGISHNPAERTNITDLAEGVKTLA 403 (423)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEEE-----SSCCTHHHHT-TT-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEecC-----CCcccHHHHH-hh-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 34788999999999999999876543 5777655443 33 99988888876 6999999999999999999999
Q ss_pred HHHHHhhhh
Q 013257 431 AFFQEFSEL 439 (447)
Q Consensus 431 ~f~~~~~~~ 439 (447)
.++.++...
T Consensus 404 ~~~~~l~~~ 412 (423)
T 1z2l_A 404 LMLYQLAWQ 412 (423)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHHhh
Confidence 999887653
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=96.44 E-value=0.0052 Score=60.98 Aligned_cols=53 Identities=17% Similarity=0.080 Sum_probs=36.2
Q ss_pred EeecccchhhhHHHHHHHHHhccCCCCCC-----CCCCceEEEEEEecccc--------Ccccccc
Q 013257 228 IFSGRLDNLCMSFCSLKALIDSTSSEGDL-----EDEIGVRMVALFDHEEV--------GSDSAQG 280 (447)
Q Consensus 228 i~~kalDnr~g~~~~leal~~~~~~~~~~-----~~~~~~~~~~~t~qEEV--------Gsrga~g 280 (447)
+.-.+.||..||++++++++.+.+....+ ..+...+.+++++.||. |+.|++.
T Consensus 121 ~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~ 186 (329)
T 2afw_A 121 VFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRH 186 (329)
T ss_dssp CCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHH
T ss_pred CCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHH
Confidence 34578899999999999988764210000 01345688999999998 7766653
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.72 E-value=0.011 Score=64.81 Aligned_cols=54 Identities=13% Similarity=-0.050 Sum_probs=37.8
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCc
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSP 284 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~ 284 (447)
.+.||-.||++++|+++.+.+.....-.+..++++++++.||.|+.|++.-+..
T Consensus 341 Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl~GS~~~~~~ 394 (707)
T 3fed_A 341 GAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEE 394 (707)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccchhHHHHHHh
Confidence 478999999999998776532000000135678999999999999888765443
No 48
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.36 E-value=0.005 Score=66.76 Aligned_cols=144 Identities=13% Similarity=0.060 Sum_probs=84.1
Q ss_pred cccchhhhHHHHHHHHHhccCC--CCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhh
Q 013257 231 GRLDNLCMSFCSLKALIDSTSS--EGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAI 308 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~--~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~ 308 (447)
.+.||-.||++++|+++.+.+. . ....+..++++++++.||.|+.|++.-+....+. +
T Consensus 295 Ga~D~~sG~a~lLe~ar~l~~~~~~-~g~~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~-------------------l 354 (640)
T 3kas_A 295 GAAKSGVGTALLLKLAQMFSDMVLK-DGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSS-------------------L 354 (640)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHT-SCCCCSEEEEEEEESSGGGTSHHHHHHHHHTTTT-------------------G
T ss_pred CCCcCcHHHHHHHHHHHHHHHhhhh-cCCCCCCcEEEEEECCcccCchhHHHHHHhhhhh-------------------h
Confidence 4679999999999987765420 0 0012456788999999999998887543332111 1
Q ss_pred hcc--eEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEE-EEee------
Q 013257 309 QRS--FLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQD-FVVR------ 379 (447)
Q Consensus 309 ~~s--~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~-~~~r------ 379 (447)
... ..|.+|++-. |.. .+.. .++|.+...+++++++..-|+.. .+..
T Consensus 355 ~~~~~a~iNlD~~~~-----------------G~~-~l~~------~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~ 410 (640)
T 3kas_A 355 HLKAFTYINLDKAVL-----------------GTS-NFKV------SASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWAS 410 (640)
T ss_dssp GGTEEEEEECTTCBS-----------------CSS-EEEE------EECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGG
T ss_pred hhCEEEEEecccCcc-----------------CCC-ceEE------EeCHHHHHHHHHHHHhCCCCCCCCceeccccccc
Confidence 122 3465664321 111 2322 13667888899998887766421 0000
Q ss_pred --cCCCCCCChHHHHhcCCCCcEEEechhh----hccchHHhhcCH
Q 013257 380 --NDMACGSTIGPILASGVGIRTVDVGAPQ----LSMHSIREMCAV 419 (447)
Q Consensus 380 --~d~~~G~T~g~i~~a~~Gi~t~digiP~----ryMHS~~E~~~~ 419 (447)
.-+++|++..++. ...|||+++++.-- -|-||+..+.+.
T Consensus 411 ~~~~~~~~sD~~~F~-~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~ 455 (640)
T 3kas_A 411 KVEKLTLDNAAFPFL-AYSGIPAVSFCFCEDTDYPYLGTTMDTYKE 455 (640)
T ss_dssp GCCCCCTTSTHHHHH-HHHCCCEEEEEEECSSCCTTTTSTTCCHHH
T ss_pred ccCCCCCCcchHHHH-HhCCCCeeeccccCCCCCCCcCCccccHHH
Confidence 1122333345554 55899999998532 135887766653
No 49
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=95.20 E-value=0.033 Score=57.80 Aligned_cols=80 Identities=9% Similarity=0.040 Sum_probs=63.4
Q ss_pred ccCHHHHHHHHHHHHhCC-C-CEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhhc--cchHHhhcCHHHHHHHHHH
Q 013257 353 ATNAVTSFVFREVASKHN-L-PVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLS--MHSIREMCAVDDVKHSYEH 428 (447)
Q Consensus 353 ~t~~~~~~~l~~~a~~~~-I-p~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~ry--MHS~~E~~~~~Di~~~~~l 428 (447)
..|+.+.+.+++.+++.| + +.+.... +|+|++.+. ++. +|++.+..|... +|++.|.++.+|+...+++
T Consensus 365 ~~d~~l~~~~~~a~~~~G~~~~~~~~~~-----~ggtD~~~~-~~~-~P~~~~fgp~~~~~~H~p~E~i~~~~l~~~~~~ 437 (474)
T 2v8h_A 365 NFHEVCIECVSRSAFAQFKKDQVRQIWS-----GAGHDSCQT-APH-VPTSMIFIPSKDGLSHNYYEYSSPEEIENGFKV 437 (474)
T ss_dssp ECCHHHHHHHHHHHHHHSCGGGEEEEEE-----SSCCTHHHH-TTT-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCcceecCC-----cCCccHHHH-Hhh-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHH
Confidence 347889999999999888 7 7775543 577765543 333 999888778754 8999999999999999999
Q ss_pred HHHHHHHhhhh
Q 013257 429 FKAFFQEFSEL 439 (447)
Q Consensus 429 l~~f~~~~~~~ 439 (447)
+..++..+...
T Consensus 438 ~~~~l~~l~~~ 448 (474)
T 2v8h_A 438 LLQAIINYDNY 448 (474)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99998877553
No 50
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.35 E-value=0.088 Score=52.23 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=40.9
Q ss_pred ceEeeccc-chhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEecccc-CcccccccC
Q 013257 226 EFIFSGRL-DNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEV-GSDSAQGAG 282 (447)
Q Consensus 226 ~~i~~kal-Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEV-Gsrga~gA~ 282 (447)
+++.|++- ||+.++++++.+++.+.+. . .+..+.++|+.+||+ |++|+....
T Consensus 96 g~~~g~G~~D~k~g~a~~l~a~~~l~~~----~-~~~~v~~~~~~~EE~~g~~G~~~~~ 149 (356)
T 3ct9_A 96 GKLYGLGSNDAGASVVSLLQVFLQLCRT----S-QNYNLIYLASCEEEVSGKEGIESVL 149 (356)
T ss_dssp SEEESTTTTTTHHHHHHHHHHHHHHTTS----C-CSSEEEEEEECCGGGTCTTTHHHHG
T ss_pred CEEEecCcccchHHHHHHHHHHHHHHhc----C-CCCCEEEEEEeCcccCCccCHHHHH
Confidence 46777777 9999999999999887642 1 346788999999999 888877443
No 51
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=93.12 E-value=0.064 Score=55.29 Aligned_cols=79 Identities=15% Similarity=0.047 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHhC-CCCEEEEEeecCCCCCCChH-HHHhcCCCCcEEEe--chhhhccchHHhhcCHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASKH-NLPVQDFVVRNDMACGSTIG-PILASGVGIRTVDV--GAPQLSMHSIREMCAVDDVKHSYEHFK 430 (447)
Q Consensus 355 ~~~~~~~l~~~a~~~-~Ip~Q~~~~r~d~~~G~T~g-~i~~a~~Gi~t~di--giP~ryMHS~~E~~~~~Di~~~~~ll~ 430 (447)
|..+.+.+++.+++. |.+..... .+|+++. .+.....|+|++.+ |-+.-..|++.|-++.+++...++++.
T Consensus 394 d~~~~~~~~~a~~~~~g~~~~~~~-----~~gs~d~~~~~~~~~~~p~~~~g~g~~~~~~H~~~E~i~~~~l~~~~~~~~ 468 (479)
T 2zog_A 394 NHPHYQAGRRALKTVFGVEPDLTR-----EGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLA 468 (479)
T ss_dssp TSHHHHHHHHHHHHHHSSCCEEEE-----ESSCCTHHHHHHHHHCSEEEECCCBCTTCCTTSTTCEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceecC-----CCCccchHHHHHHHhCCCEEEecCCCCccCCCCCCCcEeHHHHHHHHHHHH
Confidence 334555555555553 44433221 1355543 23223358999885 544457999999999999999999999
Q ss_pred HHHHHhhh
Q 013257 431 AFFQEFSE 438 (447)
Q Consensus 431 ~f~~~~~~ 438 (447)
.++.++..
T Consensus 469 ~~~~~~~~ 476 (479)
T 2zog_A 469 AYLYEVSQ 476 (479)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988764
No 52
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=92.66 E-value=0.091 Score=54.29 Aligned_cols=77 Identities=16% Similarity=0.190 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHhC-CCCEEEEEeecCCCCCCC-hHHHHhcCCCCcEEEechh--hhccchHHhhcCHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASKH-NLPVQDFVVRNDMACGST-IGPILASGVGIRTVDVGAP--QLSMHSIREMCAVDDVKHSYEHFK 430 (447)
Q Consensus 355 ~~~~~~~l~~~a~~~-~Ip~Q~~~~r~d~~~G~T-~g~i~~a~~Gi~t~digiP--~ryMHS~~E~~~~~Di~~~~~ll~ 430 (447)
|..+.+.+++.+++. +.+..... ..+|++ .+.+... .|+|++.+|.- ...+|++.|-++++++..+++++.
T Consensus 400 d~~l~~~~~~a~~~~~g~~~~~~~----~~gg~~D~~~~~~~-~g~p~v~~G~g~~~~~~H~~~E~i~i~~l~~~~~~~~ 474 (481)
T 2pok_A 400 SAPAILNVIELAKKFYPQGVSVLP----TTAGTGPMHTVFDA-LEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELVE 474 (481)
T ss_dssp CSHHHHHHHHHHTTTCTTCEEEES----CBSSCCTHHHHHHH-HCCCEEBCCSBCTTCCTTSTTCEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCccccc----cCCCCCchHHHHHH-cCCCEEEecCCCcccCCCCCCCcEEHHHHHHHHHHHH
Confidence 344555555555442 54433221 123443 4545433 59999888763 367999999999999999999999
Q ss_pred HHHHHh
Q 013257 431 AFFQEF 436 (447)
Q Consensus 431 ~f~~~~ 436 (447)
.++.++
T Consensus 475 ~~l~~l 480 (481)
T 2pok_A 475 ELIRSY 480 (481)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 998765
No 53
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=91.50 E-value=0.12 Score=53.48 Aligned_cols=60 Identities=12% Similarity=0.049 Sum_probs=36.7
Q ss_pred hhchhhhcCCCcce---eccccceE--Eee---eEEEEc--cCCeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 3 RRGVCKQWGINRFQ---REKIGNWK--LAR---DTFFTR--NHSTIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 3 ~~~~~~~~~~sG~E---~~~~~~w~--l~~---~~~~d~--~~gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+++|.+...+|+.| .+..+.+. ++. ++.++. ..+||+|...|+.. +.+.+++.||||.+.
T Consensus 50 l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~--~~~~i~l~aH~D~vp 119 (481)
T 2pok_A 50 LRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRP--DAKTLIFYNHYDTVP 119 (481)
T ss_dssp HHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSST--TCCEEEEEEECCCCC
T ss_pred HHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCC--CCCeEEEEEeccCcC
Confidence 45666666777766 33333332 444 555543 23699998755421 134699999999974
No 54
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=91.27 E-value=0.086 Score=52.99 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=48.3
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEcc-------CCeEEEEEeCCcccCCCCeEEEEeecCCC--ceEee
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRN-------HSTIIAFAVGKKYVAGNGFHVVGAHTDSP--CLKLK 68 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~-------~gnlia~~~g~~~~~~~~~vmi~AH~De~--g~~Vk 68 (447)
+++|.+...+||.|.+.++.+. ++. ++..+.. .+|++|...|+....+.+.+++.||||.+ |..++
T Consensus 30 l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~ 109 (396)
T 3rza_A 30 FLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVK 109 (396)
T ss_dssp HHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCC
T ss_pred HHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcc
Confidence 4667777778888877777663 555 6666541 36999987664100113469999999988 54444
Q ss_pred cCccccCCCeeE
Q 013257 69 PVSKVTKGGYLE 80 (447)
Q Consensus 69 ~~~~i~~~G~~~ 80 (447)
| .++++|+++
T Consensus 110 p--~~~~~g~~~ 119 (396)
T 3rza_A 110 P--IVKDDGYIY 119 (396)
T ss_dssp C--EECTTSEEE
T ss_pred e--EEecCCEEE
Confidence 4 233347753
No 55
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=91.06 E-value=0.14 Score=51.02 Aligned_cols=73 Identities=12% Similarity=0.130 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHh-CCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhh-hccchHHhhcCHHHHHHHHHHHHHHH
Q 013257 356 AVTSFVFREVASK-HNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQ-LSMHSIREMCAVDDVKHSYEHFKAFF 433 (447)
Q Consensus 356 ~~~~~~l~~~a~~-~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~-ryMHS~~E~~~~~Di~~~~~ll~~f~ 433 (447)
..+.+.+++.+++ .+.+.. .. .+|+|+..+.. +.|+|++.+|... ..+|++.|-++.+|+...++++..++
T Consensus 293 ~~l~~~~~~a~~~~~g~~~~-~~-----~~g~~D~~~~~-~~g~p~v~~Gpg~~~~~H~~~E~~~~~~l~~~~~~~~~~~ 365 (369)
T 2f7v_A 293 AEERRLAARDVADALDLPIG-NA-----VDFWTEASLFS-AGGYTALVYGPGDIAQAHTADEFVTLAQLQRYVESVNRII 365 (369)
T ss_dssp HHHHHHHHHHHHHHTTCCBC-CC-----BSSCCTHHHHH-HTTCCEEECCSSCGGGTTCTTCEEEHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCC-cc-----ccccCcHHHHh-hCCCCEEEECCCCccccCCCCceEEHHHHHHHHHHHHHHH
Confidence 5678888888876 476653 11 24666554433 3599999888643 67899999999999999999999887
Q ss_pred HH
Q 013257 434 QE 435 (447)
Q Consensus 434 ~~ 435 (447)
.+
T Consensus 366 ~~ 367 (369)
T 2f7v_A 366 NG 367 (369)
T ss_dssp HC
T ss_pred Hh
Confidence 64
No 56
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=90.91 E-value=0.2 Score=52.15 Aligned_cols=54 Identities=13% Similarity=0.039 Sum_probs=40.8
Q ss_pred cCCceEeecc-cchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCccccc
Q 013257 223 IKKEFIFSGR-LDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQ 279 (447)
Q Consensus 223 l~~~~i~~ka-lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~ 279 (447)
..++++.|++ .||+.++++++.|++.+.+.+ ......+.++|+..||+|+.|+.
T Consensus 126 ~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~---~~~~~~i~~~~~~~EE~g~~g~~ 180 (492)
T 3khx_A 126 VTEDAIIARGTLDDKGPTIAAYYAIKILEDMN---VDWKKRIHMIIGTDEESDWKCTD 180 (492)
T ss_dssp ECSSEEESTTTTTTHHHHHHHHHHHHHHHHTT---CCCSSEEEEEEECCTTCCCCTTS
T ss_pred EECCEEEecCCccCcHHHHHHHHHHHHHHHcC---CCCCCCEEEEEECCccCCCcCHH
Confidence 3567898985 599999999999888765311 01345688999999999987765
No 57
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=90.25 E-value=0.52 Score=48.60 Aligned_cols=79 Identities=15% Similarity=0.082 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEEeecCCCCCCCh-HH-HHhcCCCCcEEEech--hhhccchHHhhcCHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASK-HNLPVQDFVVRNDMACGSTI-GP-ILASGVGIRTVDVGA--PQLSMHSIREMCAVDDVKHSYEHF 429 (447)
Q Consensus 355 ~~~~~~~l~~~a~~-~~Ip~Q~~~~r~d~~~G~T~-g~-i~~a~~Gi~t~digi--P~ryMHS~~E~~~~~Di~~~~~ll 429 (447)
++.+.+.+++.+++ .|.+..... .+|++. .. +...--|+|++-+|+ |--..|++.|-++.+++...++++
T Consensus 387 ~~~l~~~~~~a~~~~~G~~~~~~~-----~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~~~~H~p~E~i~~~~l~~g~~~l 461 (472)
T 3pfe_A 387 SDWLAKAASEASMTYYDKPAAYMG-----EGGTIPFMSMLGEQFPKAQFMITGVLGPHSNAHGPNEFLHLDMVKKLTSCV 461 (472)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEE-----ESSCCHHHHHHHHHCTTCEEEEECCBCTTCCTTSTTCEEEHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCceecc-----CCCchhhHHHHHHHcCCCCEEEecCCCCCCCCcCCCcceeHHHHHHHHHHH
Confidence 56788888888887 577665432 134442 23 333334999999887 556799999999999999999999
Q ss_pred HHHHHHhhh
Q 013257 430 KAFFQEFSE 438 (447)
Q Consensus 430 ~~f~~~~~~ 438 (447)
..++..+..
T Consensus 462 ~~~l~~la~ 470 (472)
T 3pfe_A 462 SYVLYSFSQ 470 (472)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999988764
No 58
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=90.01 E-value=0.18 Score=52.12 Aligned_cols=52 Identities=17% Similarity=0.118 Sum_probs=38.6
Q ss_pred CceEeeccc-chhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccc
Q 013257 225 KEFIFSGRL-DNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQG 280 (447)
Q Consensus 225 ~~~i~~kal-Dnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~g 280 (447)
++++.|++- ||+.++++++.+++.+.+.. . ... .+.++|+..||+|+.|+..
T Consensus 120 ~g~~~grG~~D~K~~~a~~l~a~~~l~~~~--~-~~~-~v~~~~~~~EE~g~~g~~~ 172 (472)
T 3pfe_A 120 NGLLYGRGGADDGYSAYASLTAIRALEQQG--L-PYP-RCILIIEACEESGSYDLPF 172 (472)
T ss_dssp TTEEESTTCCCCCHHHHHHHHHHHHHHHTT--C-CCE-EEEEEEESCGGGTSTTHHH
T ss_pred CCEEEEeCcccCcHHHHHHHHHHHHHHHcC--C-CCC-cEEEEEEeCCCCCChhHHH
Confidence 457888886 99999999998887664211 0 123 6788999999999877553
No 59
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=89.98 E-value=0.12 Score=53.72 Aligned_cols=76 Identities=12% Similarity=0.027 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHhC-CCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhh--hccchHHhhcCHHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASKH-NLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQ--LSMHSIREMCAVDDVKHSYEHFKA 431 (447)
Q Consensus 355 ~~~~~~~l~~~a~~~-~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~--ryMHS~~E~~~~~Di~~~~~ll~~ 431 (447)
|..+.+.+++.+++. |++.+... .+|+|++.+.. .+++...+. |- ..+|++.|-++++|+...++++..
T Consensus 412 d~~lv~~l~~a~~~~~G~~~~~~~-----~gggtDa~~~~--~~v~~G~~f-Pg~~~~~H~~dE~v~i~~l~~~~~i~~~ 483 (492)
T 3khx_A 412 NDPFVQKLVTAYRNQTNDMTEPYT-----IGGGTYARNLD--KGVAFGAMF-SDSEDLMHQKNEYITKKQLFNATSIYLE 483 (492)
T ss_dssp GCHHHHHHHHHHHTTCC-------------------------------------------CCSCEEEHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCCeEEe-----eehhHHHHHhh--CceEECCcC-CCCCCCCCCCccCcCHHHHHHHHHHHHH
Confidence 567888888888886 88776554 25777665543 267766555 63 579999999999999999999999
Q ss_pred HHHHhhh
Q 013257 432 FFQEFSE 438 (447)
Q Consensus 432 f~~~~~~ 438 (447)
++..+..
T Consensus 484 ~l~~l~~ 490 (492)
T 3khx_A 484 AIYSLCV 490 (492)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9988753
No 60
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=89.74 E-value=0.28 Score=48.73 Aligned_cols=45 Identities=11% Similarity=-0.082 Sum_probs=34.7
Q ss_pred eEeec-ccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEecccc-Cccccccc
Q 013257 227 FIFSG-RLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEV-GSDSAQGA 281 (447)
Q Consensus 227 ~i~~k-alDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEV-Gsrga~gA 281 (447)
++.|+ ..||+.|+++++++++. . +..+.++|+..||+ |+.|+...
T Consensus 98 ~l~grG~~D~k~g~a~~l~a~~~-~---------~~~v~~~~~~~EE~~g~~G~~~~ 144 (369)
T 2f7v_A 98 RVIGLGVCDIKGAAAALVAAANA-G---------DGDAAFLFSSDEEANDPRCIAAF 144 (369)
T ss_dssp EEECTTTTTTHHHHHHHHHHHTT-C---------CCCEEEEEESCTTSSSCCHHHHH
T ss_pred EEEecccccccHHHHHHHHHHhc-C---------CCCEEEEEEeCcccCCCcCHHHH
Confidence 44444 69999999999998765 1 24578999999999 88877643
No 61
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=89.48 E-value=0.13 Score=50.95 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=42.0
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEcc-------CCeEEEEEeCCcccCCCCeEEEEeecCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRN-------HSTIIAFAVGKKYVAGNGFHVVGAHTDSP 63 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~-------~gnlia~~~g~~~~~~~~~vmi~AH~De~ 63 (447)
+++|.+...+||.|.+.++.+. ++. ++..+.. .+|++|...|++. +.+.+++.||||.+
T Consensus 12 l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~--~~~~v~l~aH~D~v 82 (373)
T 3gb0_A 12 FMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKD--GVDTIYFTSHMDTV 82 (373)
T ss_dssp HHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSST--TCCCEEEEEECCBC
T ss_pred HHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCC--CCCEEEEEEECccc
Confidence 4567777778988887777764 665 6666542 2699998766521 13469999999998
No 62
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=89.27 E-value=0.13 Score=46.76 Aligned_cols=61 Identities=8% Similarity=-0.045 Sum_probs=38.0
Q ss_pred hhchhhhcCCCc--ceeccccceE--Eee---eEEEEc---cCCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 3 RRGVCKQWGINR--FQREKIGNWK--LAR---DTFFTR---NHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 3 ~~~~~~~~~~sG--~E~~~~~~w~--l~~---~~~~d~---~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+++|++...+|+ .|.+..+.+. ++. ++..+. ...|+++...|+.+ +.+.+++.||||.+..
T Consensus 16 l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~--~~~~ill~aH~DtVp~ 86 (198)
T 1q7l_A 16 FRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNP--TLSSILLNSHTDVVPV 86 (198)
T ss_dssp HHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSST--TSCEEEEEEECCBCCC
T ss_pred HHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCC--CCCeEEEEeeecccCC
Confidence 456677667777 4555555553 444 444432 22489887766432 1246999999999875
No 63
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=89.12 E-value=0.11 Score=51.27 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=41.1
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEE--ccCCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFT--RNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d--~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+|+|.+...+|+.|...++.+. ++. ++... ...+|++|.. |++ .+.+++.||||.+..
T Consensus 9 ~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~-g~~----~~~i~l~aH~D~vp~ 73 (377)
T 3isz_A 9 AQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GTS----EPVIAFAGHTDVVPT 73 (377)
T ss_dssp HHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEE-ESS----SCEEEEEEECCBCCC
T ss_pred HHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEe-CCC----CCEEEEeccccccCC
Confidence 5788888889999988777764 555 44421 1236999976 532 346999999999853
No 64
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=88.73 E-value=0.16 Score=50.55 Aligned_cols=54 Identities=22% Similarity=0.337 Sum_probs=43.0
Q ss_pred CCCChHHHHhcCCCCcEEEechhhh-ccchHHhhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 384 CGSTIGPILASGVGIRTVDVGAPQL-SMHSIREMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 384 ~G~T~g~i~~a~~Gi~t~digiP~r-yMHS~~E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
+|+|++.+. ++.|+|++.+|.... .+|++.|.++.+++...++++..++..+..
T Consensus 306 ~g~~D~~~~-~~~~~p~v~~Gp~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 360 (364)
T 2rb7_A 306 HGASDARYL-GENGLTGVVWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLAREMEE 360 (364)
T ss_dssp SSCCGGGGT-GGGTCCEEECCCCCTTCTTSTTCEEETTHHHHHHHHHHHHHHHHHC
T ss_pred CCCchHHHH-HhcCCCEEEECCCCccccCCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 456655443 235999999997655 679999999999999999999999887754
No 65
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=88.42 E-value=0.13 Score=51.83 Aligned_cols=50 Identities=16% Similarity=0.108 Sum_probs=36.2
Q ss_pred CcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 13 NRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 13 sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
|+.|.+.++.+. ++. ++..+.. ||++|...|+++ +.+.+++.||||.+..
T Consensus 31 s~~e~~~~~~l~~~l~~~g~~~~~d~~-gnv~a~~~g~~~--~~~~i~l~aH~D~v~~ 85 (408)
T 3n5f_A 31 TAEERRAKDLVASYMREAGLFVYEDAA-GNLIGRKEGTNP--DATVVLVGSHLDSVYN 85 (408)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEECTT-CCEEEEECCSST--TSCEEEEEEESCCCTT
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEcCC-CCEEEEecCCCC--CCCEEEEEecCCCCCC
Confidence 566777777663 655 6777775 699998877542 1347999999999874
No 66
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=88.35 E-value=0.26 Score=49.62 Aligned_cols=77 Identities=12% Similarity=-0.010 Sum_probs=55.3
Q ss_pred cCHHHHHHHHHHHHhC--CCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEe--chhh-hccchHHhhcCHHHHHHHHHH
Q 013257 354 TNAVTSFVFREVASKH--NLPVQDFVVRNDMACGSTIGPILASGVGIRTVDV--GAPQ-LSMHSIREMCAVDDVKHSYEH 428 (447)
Q Consensus 354 t~~~~~~~l~~~a~~~--~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~di--giP~-ryMHS~~E~~~~~Di~~~~~l 428 (447)
.|+.+.+.+++.+++. +.+... . .+|+|+..+... . +|++-+ |... ..+|++.|-++.+++...+++
T Consensus 320 ~~~~l~~~~~~~~~~~g~g~~~~~-~-----~~g~tD~~~~~~-~-~p~~~~~~G~~~~~~~H~~~E~v~~~~l~~~~~~ 391 (404)
T 1ysj_A 320 NDGTFLNAASEAAARLGYQTVHAE-Q-----SPGGEDFALYQE-K-IPGFFVWMGTNGTEEWHHPAFTLDEEALTVASQY 391 (404)
T ss_dssp ECGGGHHHHHHHHHHTTCEEEECC-C-----BSSCCTHHHHHT-T-SCEEEEEEECCCSSCTTCTTCCCCTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCccccc-c-----CCccchHHHHHH-H-CCeEEEEEcCCCCCCCCCCCCcCCHHHHHHHHHH
Confidence 3566888999999998 443222 1 356776554433 2 898644 4433 458999999999999999999
Q ss_pred HHHHHHHhhh
Q 013257 429 FKAFFQEFSE 438 (447)
Q Consensus 429 l~~f~~~~~~ 438 (447)
+..++.++-.
T Consensus 392 ~~~~~~~~~~ 401 (404)
T 1ysj_A 392 FAELAVIVLE 401 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887754
No 67
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=87.99 E-value=0.48 Score=48.63 Aligned_cols=26 Identities=8% Similarity=-0.028 Sum_probs=18.9
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+||+|...++. ..+.+++.||||.+.
T Consensus 83 ~~v~a~~~~~~---~~~~i~l~aH~D~vp 108 (479)
T 2zog_A 83 PILLGKLGSDP---QKKTVCIYGHLDVQP 108 (479)
T ss_dssp CEEEEEECCCT---TSCEEEEEEECCBCC
T ss_pred CEEEEEecCCC---CCCeEEEEEecCCCC
Confidence 68999874422 134699999999875
No 68
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=87.86 E-value=0.32 Score=49.87 Aligned_cols=74 Identities=24% Similarity=0.362 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEech--h--hhccchHHhhcCHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASK-HNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGA--P--QLSMHSIREMCAVDDVKHSYEHF 429 (447)
Q Consensus 355 ~~~~~~~l~~~a~~-~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digi--P--~ryMHS~~E~~~~~Di~~~~~ll 429 (447)
|..+.+.+++.+++ .|.+...... +|+|.+.+.. |++.+|. | ...+|++.|-++.+|+...++++
T Consensus 388 d~~l~~~~~~a~~~~~g~~~~~~~~-----~g~~d~~~~~-----~~v~~G~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 457 (470)
T 1lfw_A 388 SDPMVQTLLKVYEKQTGKPGHEVVI-----GGGTYGRLFE-----RGVAFGAQPENGPMVMHAANEFMMLDDLILSIAIY 457 (470)
T ss_dssp TCHHHHHHHHHHHHHHCCCCCEEEE-----SSCCGGGGST-----TCEECCEECTTCCCCTTSTTCEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCceeee-----cCHhHHHhCC-----CeEEECCCCCCCCCCCCCCCcceEHHHHHHHHHHH
Confidence 45566777777766 4554433221 4667544332 5666775 3 35689999999999999999999
Q ss_pred HHHHHHhhh
Q 013257 430 KAFFQEFSE 438 (447)
Q Consensus 430 ~~f~~~~~~ 438 (447)
..++.++..
T Consensus 458 ~~~~~~l~~ 466 (470)
T 1lfw_A 458 AEAIYELTK 466 (470)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 999887754
No 69
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=87.81 E-value=2 Score=44.00 Aligned_cols=155 Identities=12% Similarity=-0.039 Sum_probs=85.3
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhc
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQR 310 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~ 310 (447)
.|=||.+|++++++..+.++.. ++..+.-|+|+. |.+|++- -.+.. ++-+++|
T Consensus 193 ~ANDNaSG~a~lleLar~l~~~-----~~~~t~rFvf~p-g~iGS~~-yl~~~---~~~l~~i----------------- 245 (435)
T 3k9t_A 193 MCNDNLSGVALITFIAKALSKL-----KTKYSYRFLFAP-ETIGSIT-WLSRN---EDKLKNI----------------- 245 (435)
T ss_dssp CTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEEC-TTHHHHH-HHHHC---GGGGGGE-----------------
T ss_pred CCCccchHHHHHHHHHHHHhcC-----CCCceEEEEEcC-ccHHHHH-HHHhC---hHhhhce-----------------
Confidence 3889999999999988777532 133444566555 7776651 11111 1111122
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHH
Q 013257 311 SFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGP 390 (447)
Q Consensus 311 s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~ 390 (447)
-..|.+||.-... ...++....+ |...-..++.+++..+-+++.+... +.|++=.+
T Consensus 246 ~a~lnLDmVGd~~-----------------~~~y~~sr~g----~~~~d~~~~~vl~~~~~~~~~~~f~---~~GSDh~q 301 (435)
T 3k9t_A 246 KMGLVATCVGDAG-----------------IKNYKRTKFG----DAEIDKIVEKVLMHCGSEYYVADFF---PWGSDERQ 301 (435)
T ss_dssp EEEEECCSCCSSS-----------------CEEEECCTTS----SSHHHHHHHHHHHHSSSCEEEECCC---SCSSTHHH
T ss_pred EEEEEEEEecCCC-----------------CceeecCCCC----ChHHHHHHHHHHhhcCCCCceecCC---CCCCcchh
Confidence 1367888754311 2333322221 2223345555666677778865432 35665566
Q ss_pred HHhcCCCCcEEEech---hhhccchHHhhcCHHHHH---HHHHHHHHHHHHh
Q 013257 391 ILASGVGIRTVDVGA---PQLSMHSIREMCAVDDVK---HSYEHFKAFFQEF 436 (447)
Q Consensus 391 i~~a~~Gi~t~digi---P~ryMHS~~E~~~~~Di~---~~~~ll~~f~~~~ 436 (447)
+...+-.||++.+.- |-.+.||+.-..+.-+.+ ...+++.+.++.+
T Consensus 302 F~spG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~L 353 (435)
T 3k9t_A 302 FSSPGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTI 353 (435)
T ss_dssp HTSTTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHh
Confidence 655555599998874 334699987665555544 4444555544444
No 70
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=87.27 E-value=0.17 Score=50.31 Aligned_cols=60 Identities=12% Similarity=-0.088 Sum_probs=36.9
Q ss_pred hhchhhhcCCC---cceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 3 RRGVCKQWGIN---RFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 3 ~~~~~~~~~~s---G~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+|+|.+...+| |.|.+..+.+. ++. ++..+. +|+++...+.. ..+.+.+++.||||.+..
T Consensus 12 l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~--~~~~~~~~~~~-~~~~~~i~l~aH~D~vp~ 79 (364)
T 2rb7_A 12 TSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD--HDGIPSVMVLP-EKGRAGLLLMAHIDVVDA 79 (364)
T ss_dssp HHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE--ETTEEEEEECS-BTTEEEEEEEEECCCCCC
T ss_pred HHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec--CCCceEEEEEc-CCCCCeEEEECccCcCCC
Confidence 56677777777 66665555553 444 444444 47888765421 111246999999999853
No 71
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=87.18 E-value=0.44 Score=49.25 Aligned_cols=46 Identities=24% Similarity=0.144 Sum_probs=36.0
Q ss_pred cCCCCcEEEechh--hhccchHHhhcCHHHHHHHHHHHHHHHHHhhhh
Q 013257 394 SGVGIRTVDVGAP--QLSMHSIREMCAVDDVKHSYEHFKAFFQEFSEL 439 (447)
Q Consensus 394 a~~Gi~t~digiP--~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~~ 439 (447)
...|++.+-+|+- --..|++.|-++.+|+...++++..++..+..+
T Consensus 437 ~~~p~~~i~~g~g~~~~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~~ 484 (485)
T 3dlj_A 437 EIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 484 (485)
T ss_dssp HHTC--CEECCCBCTTCCTTSTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCCEEEecCCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHHhhc
Confidence 4457787777653 346899999999999999999999999888653
No 72
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=85.93 E-value=0.58 Score=47.32 Aligned_cols=80 Identities=15% Similarity=-0.029 Sum_probs=55.8
Q ss_pred cCHHHHHHHHHHHHh-CCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEE--echh-----hhccchHHhhcCHHHHHHH
Q 013257 354 TNAVTSFVFREVASK-HNLPVQDFVVRNDMACGSTIGPILASGVGIRTVD--VGAP-----QLSMHSIREMCAVDDVKHS 425 (447)
Q Consensus 354 t~~~~~~~l~~~a~~-~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~d--igiP-----~ryMHS~~E~~~~~Di~~~ 425 (447)
.|+.+.+.+++.+++ .|.+.-.... ..+|+|+..+... .+|++- +|.. ...+|++.|-++.+++...
T Consensus 316 ~d~~l~~~~~~~~~~~~g~~~~~~~~---~~~g~tD~~~~~~--~~P~~~~~~G~~~~~~~~~~~H~~~E~i~~~~l~~~ 390 (418)
T 1xmb_A 316 NNKDLYKQFKKVVRDLLGQEAFVEAA---PVMGSEDFSYFAE--TIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYG 390 (418)
T ss_dssp ECHHHHHHHHHHHHHHHCGGGEEECC---CBCCCCTHHHHHT--TSCEEEEEEEEECTTCCSCCTTCTTCCCCGGGHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcceeccC---CCCCcchHHHHHH--HCCEEEEEEeCCCCCCCCCCCCCCCCccCHHHHHHH
Confidence 478899999999888 5765211111 1246776544423 399865 4442 2568999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 013257 426 YEHFKAFFQEFSE 438 (447)
Q Consensus 426 ~~ll~~f~~~~~~ 438 (447)
++++..++.++-.
T Consensus 391 ~~~~~~~~~~l~~ 403 (418)
T 1xmb_A 391 AAIHASMAVQYLK 403 (418)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999998877643
No 73
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=83.49 E-value=1.1 Score=46.16 Aligned_cols=25 Identities=20% Similarity=0.068 Sum_probs=17.5
Q ss_pred eEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 37 TIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 37 nlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
||+|...++. +.+.+++.||||.+.
T Consensus 91 ~v~a~~~~~~---~~~~i~l~aH~D~vp 115 (485)
T 3dlj_A 91 VILAELGSDP---TKGTVCFYGHLDVQP 115 (485)
T ss_dssp EEEEEECCCT---TSCEEEEEEECCBCC
T ss_pred EEEEEECCCC---CCCEEEEEeeecCCC
Confidence 6888763321 134699999999874
No 74
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=82.98 E-value=0.73 Score=47.09 Aligned_cols=13 Identities=15% Similarity=-0.156 Sum_probs=11.1
Q ss_pred CeEEEEeecCCCc
Q 013257 52 GFHVVGAHTDSPC 64 (447)
Q Consensus 52 ~~vmi~AH~De~g 64 (447)
+.+++.||||-+.
T Consensus 80 ~~i~l~~H~D~vp 92 (470)
T 1lfw_A 80 KRLGIIGHMDVVP 92 (470)
T ss_dssp SEEEEEEECCBCC
T ss_pred CeEEEEEeecccC
Confidence 4699999999874
No 75
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=81.36 E-value=0.65 Score=48.25 Aligned_cols=63 Identities=11% Similarity=-0.024 Sum_probs=43.1
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceE
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLK 66 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~ 66 (447)
+++|+....+||.|.+..+.+. ++. ++..+.. +|++|...|+....+.+.+++.||||-+...
T Consensus 20 ~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~-~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~ 87 (490)
T 3mru_A 20 FDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDPT-GNVFIKKPATPGMENKKGVVLQAHIDMVPQK 87 (490)
T ss_dssp HHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEECTT-CCEEEEECCCTTCTTCCCEEEEEECCBCCCB
T ss_pred HHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEcCC-CeEEEEEcCCCCCCCCCeEEEEeccCCCCCC
Confidence 4667777788888877766663 555 6666665 6999987653100123469999999987654
No 76
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=81.33 E-value=0.47 Score=47.81 Aligned_cols=50 Identities=24% Similarity=0.139 Sum_probs=37.7
Q ss_pred ceEeecc-----cchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccc
Q 013257 226 EFIFSGR-----LDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQG 280 (447)
Q Consensus 226 ~~i~~ka-----lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~g 280 (447)
+++.|++ .||+.++++++.+++.+.+.+ .....++++|+.+||+| +|+..
T Consensus 127 ~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~----~~~~~v~~~~~~~EE~g-~Ga~~ 181 (417)
T 1fno_A 127 TLITTDGKTLLGADDKAGVAEIMTALAVLKGNP----IPHGDIKVAFTPDEEVG-KGAKH 181 (417)
T ss_dssp CEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS----CCCCCEEEEEESCGGGT-CTTTT
T ss_pred cEEEcCCccccccccHHhHHHHHHHHHHHHhCC----CCCCcEEEEEEeccccC-CChhh
Confidence 3455666 999999999999998876421 12456899999999998 66643
No 77
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=80.74 E-value=0.45 Score=46.96 Aligned_cols=59 Identities=8% Similarity=0.028 Sum_probs=39.9
Q ss_pred hhchhhhcCCCcceeccccceE--Eee----eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR----DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~----~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+++|.+...+||.|.+..+.+. ++. .+.+++.+.|++|...++. .+.+++.||||.+..
T Consensus 19 ~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~----~~~v~l~~H~D~vp~ 83 (369)
T 3tx8_A 19 TQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGL----ASRVMLAGHIDTVPI 83 (369)
T ss_dssp HHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCC----SCEEEEEEECCBSCC
T ss_pred HHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCC----CCeEEEEcccCccCC
Confidence 5677777788988877666653 443 1345555458988764432 346999999998864
No 78
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=80.56 E-value=1.5 Score=43.88 Aligned_cols=76 Identities=13% Similarity=0.003 Sum_probs=53.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechhhh----ccchHHhh-------cCHHHH
Q 013257 354 TNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQL----SMHSIREM-------CAVDDV 422 (447)
Q Consensus 354 t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP~r----yMHS~~E~-------~~~~Di 422 (447)
.|+.+.+.+++.+++.|.++.. .. ..+|+|+..+.. .++|++.+.+++. ..||+ |. ++.+++
T Consensus 286 ~d~~l~~~~~~a~~~~G~~~~~-~~---~~~g~~D~~~~~--~~~P~~~~~~g~~~~~~~~H~~-ef~~~~~~~~~~~~l 358 (394)
T 3ram_A 286 KTPKLDDLFAKYAEEVGEAVID-DD---FGYGSTDTGNVS--HVVPTIHPHIKIGSRNLVGHTH-RFREAAASVHGDEAL 358 (394)
T ss_dssp CCHHHHHHHHHHHHHTTCCBCC-SC---CCCBCCTHHHHT--TTSCBCCCEEECSCTTCCTTSH-HHHHHTTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccccc-CC---CCcccccHHHHH--HHhchheEEeeecCCCCCCCCH-HHHhccCCCccHHHH
Confidence 4789999999999998844311 11 135677655543 4699988755543 57999 55 489999
Q ss_pred HHHHHHHHHHHHHh
Q 013257 423 KHSYEHFKAFFQEF 436 (447)
Q Consensus 423 ~~~~~ll~~f~~~~ 436 (447)
...++++..++..+
T Consensus 359 ~~g~~~la~~~~~~ 372 (394)
T 3ram_A 359 IKGAKIMALMGLEL 372 (394)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998877554
No 79
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=80.49 E-value=0.24 Score=47.63 Aligned_cols=27 Identities=33% Similarity=0.268 Sum_probs=20.1
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
.||+|...|+.+ .+.+|+.||+|+++.
T Consensus 65 ~nvi~~~~g~~~---~~~i~l~aH~D~v~~ 91 (284)
T 1tkj_A 65 YNLIANWPGGDP---NKVLMAGAHLDSVSS 91 (284)
T ss_dssp EEEEEECSCSEE---EEEEEEEEECCCCTT
T ss_pred eeEEEEEeCCCC---CCEEEEEeecCCCCC
Confidence 499998756421 246999999999875
No 80
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=80.25 E-value=0.89 Score=45.91 Aligned_cols=57 Identities=14% Similarity=0.101 Sum_probs=40.3
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCC
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSP 63 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~ 63 (447)
+|+|.+...+||.|.+..+.+. ++. ++..+...+|++|...|++ .+.+++.||||.+
T Consensus 34 ~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~----~~~i~l~aH~D~v 95 (418)
T 1xmb_A 34 RRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE----PPFVALRADMDAL 95 (418)
T ss_dssp HHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSS----SCEEEEEEECCCB
T ss_pred HHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCC----CCEEEEEeccccc
Confidence 5677777788888877666653 555 5656543479999876543 1469999999986
No 81
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=77.97 E-value=0.84 Score=47.11 Aligned_cols=62 Identities=8% Similarity=-0.148 Sum_probs=42.0
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+|+|.+...+||.|.+..+.+. ++. ++..+.. +|++|...|+....+.+.+++.||||.+..
T Consensus 17 ~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~-~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~ 83 (487)
T 2qyv_A 17 FDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDEV-GNVLIRKPATVGMENRKPVVLQAHLDMVPQ 83 (487)
T ss_dssp HHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECTT-CCEEEEECCCTTCTTBCCEEEEEESCBCCC
T ss_pred HHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcCC-CcEEEEeCCCCCCCCCCeEEEEccCCccCC
Confidence 5677777778888877766663 555 6666654 699998755310011346999999999865
No 82
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=77.30 E-value=1.3 Score=43.76 Aligned_cols=67 Identities=7% Similarity=0.084 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEEechh-hhccchHHhhcCHHHHHHHHHHHHHHH
Q 013257 355 NAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAP-QLSMHSIREMCAVDDVKHSYEHFKAFF 433 (447)
Q Consensus 355 ~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~digiP-~ryMHS~~E~~~~~Di~~~~~ll~~f~ 433 (447)
|..+.+.+++.+++ ++ . .+|+|+.. ..|+|++.+|.- .-.+|++.|.++.+++...++++..++
T Consensus 287 ~~~l~~~~~~~~~~---~~---~-----~~g~tD~~----~~~~p~v~~G~g~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 351 (356)
T 3ct9_A 287 KHPFVQKAVKMGRI---PF---G-----SPTLSDQA----LMSFASVKIGPGRSSRSHTAEEYIMLKEIEEAIGIYLDLL 351 (356)
T ss_dssp TSHHHHHHHHTTCC---CE---E-----ECSCCGGG----GCCSCEEECCSSBGGGTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcC---Cc---c-----cccccchh----hcCCCEEEECCCccccCcCCCcEEEHHHHHHHHHHHHHHH
Confidence 44666667666552 21 1 14666543 249999988864 356899999999999999999999988
Q ss_pred HHh
Q 013257 434 QEF 436 (447)
Q Consensus 434 ~~~ 436 (447)
.++
T Consensus 352 ~~~ 354 (356)
T 3ct9_A 352 DGL 354 (356)
T ss_dssp TTC
T ss_pred HHh
Confidence 654
No 83
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=76.57 E-value=1.3 Score=44.40 Aligned_cols=59 Identities=8% Similarity=-0.187 Sum_probs=40.9
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEccC--CeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRNH--STIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~~--gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
||+|.+....|+-|.+..+.+. |+. ++..+..+ .|++|...|+.+ .+.+++.||||.+.
T Consensus 22 ~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~---g~~i~l~ah~D~vp 87 (394)
T 3ram_A 22 SHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLD---GPAIGFLAEYDALP 87 (394)
T ss_dssp HHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSS---SCEEEEEECCCCCT
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCC---CCEEEEEEecccCC
Confidence 5777787888887776666653 555 55555432 289998766432 34699999999985
No 84
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=75.54 E-value=1.2 Score=44.81 Aligned_cols=59 Identities=8% Similarity=-0.045 Sum_probs=38.7
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEE---------------------ccCCeEEEEEeCCcccCCCCeEEE
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFT---------------------RNHSTIIAFAVGKKYVAGNGFHVV 56 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d---------------------~~~gnlia~~~g~~~~~~~~~vmi 56 (447)
+|+|.+...+||.|.+..+.+. ++. ++... ...+||+|...|+.. .+.+++
T Consensus 32 l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~~---~~~v~l 108 (433)
T 3pfo_A 32 LQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDGK---GRSLIL 108 (433)
T ss_dssp HHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCCC---SCCEEE
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCCC---CCEEEE
Confidence 5677777778888877666553 444 33221 223699998765331 346999
Q ss_pred EeecCCCc
Q 013257 57 GAHTDSPC 64 (447)
Q Consensus 57 ~AH~De~g 64 (447)
.||||.+.
T Consensus 109 ~aH~D~vp 116 (433)
T 3pfo_A 109 QGHIDVVP 116 (433)
T ss_dssp EEECCBCC
T ss_pred EcccCCcC
Confidence 99999874
No 85
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=69.67 E-value=1.5 Score=44.07 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=38.9
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEcc-CCeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTRN-HSTIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~~-~gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+++|.....+|+.|.+..+.+. ++. ++..+.. ..|++|...|++. .+.+++.||||.+.
T Consensus 38 ~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~---~~~i~l~~H~D~vp 102 (404)
T 1ysj_A 38 RRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGRED---GPVIAIRADIDALP 102 (404)
T ss_dssp HHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSC---CCEEEEEEECCCBS
T ss_pred HHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCC---CCEEEEEEeccccc
Confidence 5677777778887776666553 555 4433333 1389998766431 34699999999863
No 86
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=69.57 E-value=1.9 Score=42.82 Aligned_cols=57 Identities=16% Similarity=0.049 Sum_probs=38.1
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEE--ccCCeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFT--RNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d--~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+|+|......|+.|....+.+. ++. ++... ...+|++|.. |+. .+.+++.||||.+.
T Consensus 12 l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~----~~~i~l~~H~D~Vp 75 (393)
T 1vgy_A 12 AKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GTK----APVVCFAGHTDVVP 75 (393)
T ss_dssp HHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CSS----SSEEEEEEECCBCC
T ss_pred HHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CCC----CCEEEEEcccCCcC
Confidence 5677777778887776665553 555 44331 1236999986 642 34699999999874
No 87
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=67.73 E-value=3.7 Score=41.76 Aligned_cols=84 Identities=13% Similarity=0.044 Sum_probs=46.1
Q ss_pred ccCHHHHHHHHHHHHhC-CCCEEEEEeecCCCCCCChHHHHhcC---CCCcE--EEechh-hhccchHHhhcCHHHHHHH
Q 013257 353 ATNAVTSFVFREVASKH-NLPVQDFVVRNDMACGSTIGPILASG---VGIRT--VDVGAP-QLSMHSIREMCAVDDVKHS 425 (447)
Q Consensus 353 ~t~~~~~~~l~~~a~~~-~Ip~Q~~~~r~d~~~G~T~g~i~~a~---~Gi~t--~digiP-~ryMHS~~E~~~~~Di~~~ 425 (447)
..|+.+.+.+++.+++. +.+...... ...+|+|+..+.... .|.|+ +-+|.. ....|++.|-++.+++...
T Consensus 343 ~~d~~l~~~~~~a~~~~~g~~~v~~~~--~~~~g~~D~~~~~~~~P~~gg~~~~~~~G~~~~~~~H~~~E~i~~~~l~~g 420 (445)
T 3io1_A 343 APSPAWVDYLREQAARVPGVQQAVDRI--AAPAGSEDATLMMARVQARGGLASYMIFGTELSAGHHNEKFDFDESVMAVA 420 (445)
T ss_dssp CCCHHHHHHHHHHHHHSTTCCBCBSSC--CCCCBCCTHHHHHHHHHHTTCEEEEEEEEEEC-----------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCccceecC--CCCccHHHHHHHHHHhcccCCceEEEEEeCCCCCCCCCCCCcCCHHHHHHH
Confidence 34788999999999988 564311000 012567754433222 23344 445542 3468999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 013257 426 YEHFKAFFQEFSE 438 (447)
Q Consensus 426 ~~ll~~f~~~~~~ 438 (447)
++++..++.++-.
T Consensus 421 ~~~~~~~~~~~~~ 433 (445)
T 3io1_A 421 VETLARVALNFPW 433 (445)
T ss_dssp HHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887643
No 88
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=66.31 E-value=4.1 Score=39.47 Aligned_cols=26 Identities=19% Similarity=-0.008 Sum_probs=20.4
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
.||||...|+. ...+||+||.|+.++
T Consensus 83 ~Nii~~~~g~~----~~~i~l~aH~Ds~~~ 108 (309)
T 4fuu_A 83 RNIIGSYKPES----KKRIALFAHWDTRPW 108 (309)
T ss_dssp EEEEEEESTTC----SSEEEEEEECCCCSC
T ss_pred EEEEEEECCCC----CceEEEEeecCCCCC
Confidence 48999886653 347999999999764
No 89
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=64.78 E-value=3.3 Score=39.13 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=35.8
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEEc--cCCeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFTR--NHSTIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d~--~~gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+++|.+...+|+.|....+.+. ++. ++.... ..+|++|.. |+. .+.+++.||||.+.
T Consensus 12 l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~----~~~i~l~~H~D~vp 75 (269)
T 4h2k_A 12 AQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GTS----EPVIAFAGHTDVVP 75 (269)
T ss_dssp HHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CSS----SCEEEEEEECCBCC
T ss_pred HHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CCC----CCEEEEEeeecccC
Confidence 4566666677777766555442 444 333322 236999976 532 34699999999874
No 90
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=63.11 E-value=4.8 Score=39.20 Aligned_cols=26 Identities=23% Similarity=0.028 Sum_probs=20.9
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+||||...|+. .+.++++||+|+++.
T Consensus 83 ~Nvia~~~g~~----~~~ill~aH~Dsv~~ 108 (309)
T 3tc8_A 83 RNIIGSFDPEN----SKRVLLFAHWDSRPY 108 (309)
T ss_dssp EEEEEEESTTC----SSEEEEEEECCCCSC
T ss_pred eEEEEEECCCC----CceEEEEecccCCCC
Confidence 69999886642 347999999999975
No 91
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=62.24 E-value=5.1 Score=39.20 Aligned_cols=26 Identities=23% Similarity=0.079 Sum_probs=20.2
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+||||...|+. .+.+|++||+|+++.
T Consensus 85 ~Nvia~~~g~~----~~~ill~aH~Dsv~~ 110 (314)
T 3gux_A 85 RNIIGAYKPES----KKRILLCAHWDSRPY 110 (314)
T ss_dssp EEEEEEESTTC----SSEEEEEEECCCCC-
T ss_pred eEEEEEECCCC----CceEEEEccccCCCc
Confidence 69999986642 347999999999875
No 92
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=60.26 E-value=5.4 Score=38.50 Aligned_cols=49 Identities=14% Similarity=0.238 Sum_probs=33.0
Q ss_pred hHHHHhcCCCCcEEEec-hhh-hccchHH---hhcCHHHHHHHHHHHHHHHHHhhh
Q 013257 388 IGPILASGVGIRTVDVG-APQ-LSMHSIR---EMCAVDDVKHSYEHFKAFFQEFSE 438 (447)
Q Consensus 388 ~g~i~~a~~Gi~t~dig-iP~-ryMHS~~---E~~~~~Di~~~~~ll~~f~~~~~~ 438 (447)
-.|+. +.|||++++. .|- .+-||+. |.++...+++..+++.+|+.+|-+
T Consensus 246 H~pF~--~~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~ 299 (312)
T 4f9u_A 246 HRPFL--DENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLK 299 (312)
T ss_dssp THHHH--TTTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHH--HCCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 35664 4699999983 111 2458876 456677777888888888876643
No 93
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=60.08 E-value=2.1 Score=42.94 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=24.9
Q ss_pred eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 28 DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 28 ~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
++..+.. +|++|...|+++ +.+.+++.||||.+..
T Consensus 55 ~v~~~~~-gnv~a~~~g~~~--~~~~i~l~~H~D~Vp~ 89 (423)
T 1z2l_A 55 ETRFDEV-GNLYGRLNGTEY--PQEVVLSGSHIDTVVN 89 (423)
T ss_dssp EEEECTT-SCEEEEECCSSE--EEEEEEEEEECCCCTT
T ss_pred EEEEecC-CcEEEEEcCCCC--CCCEEEEEEecCCCCC
Confidence 5666665 699998766432 1246999999999875
No 94
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=59.21 E-value=4.3 Score=40.09 Aligned_cols=26 Identities=15% Similarity=0.185 Sum_probs=20.5
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
+||||...|+. .+.+|++||+|++.+
T Consensus 97 ~Nvia~~~g~~----~~~ivl~aH~Dsv~~ 122 (330)
T 3pb6_X 97 GNVVATLDPRA----ARHLTLACHYDSKLF 122 (330)
T ss_dssp EEEEEESCTTS----SEEEEEEEECCCCCC
T ss_pred eEEEEEECCCC----CceEEEEeccCCCCC
Confidence 69999876643 247999999999865
No 95
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=57.11 E-value=3.7 Score=41.47 Aligned_cols=51 Identities=18% Similarity=0.092 Sum_probs=37.6
Q ss_pred CceEeecc-----cchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCccccc
Q 013257 225 KEFIFSGR-----LDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQ 279 (447)
Q Consensus 225 ~~~i~~ka-----lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~ 279 (447)
+++|.|++ .||+.++++++.+++.+.+.+ ...+..+.++|+..||+| +|+.
T Consensus 152 ~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~---~~~~~~i~~if~~~EE~g-~Ga~ 207 (434)
T 3ife_A 152 HTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNP---QIKHGKIRVAFTPDEEIG-RGPA 207 (434)
T ss_dssp SCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCT---TSCBCCEEEEEESCGGGT-CTGG
T ss_pred CcEEECCCccchhhhhHHHHHHHHHHHHHHHhCC---CCCCCCEEEEEECCcccC-hHHH
Confidence 34677766 899999999999988765311 113456889999999998 6644
No 96
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=56.74 E-value=2.2 Score=40.29 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=33.7
Q ss_pred hhchhhhcCCCcceeccccceE--Eee---eEEEE--ccCCeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 3 RRGVCKQWGINRFQREKIGNWK--LAR---DTFFT--RNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 3 ~~~~~~~~~~sG~E~~~~~~w~--l~~---~~~~d--~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+++|.+...+|+.|....+.+. ++. ++... ...+|++|.. |+. .+.+++.||||.+.
T Consensus 12 l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~----~~~i~l~~H~D~vp 75 (268)
T 3t68_A 12 AKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARR-GTQ----SPLFVFAGHTDVVP 75 (268)
T ss_dssp HHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEE-CSS----SCEEEEEEECCBCC
T ss_pred HHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEe-CCC----CCeEEEEccccccC
Confidence 4566777777877766555442 443 22211 1225899876 542 34699999999774
No 97
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=56.70 E-value=5.3 Score=38.30 Aligned_cols=27 Identities=22% Similarity=0.433 Sum_probs=20.1
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+||+|...|+... .+.+|+.||+|++.
T Consensus 76 ~nvi~~~~g~~~~--~~~v~l~aH~D~v~ 102 (299)
T 1rtq_A 76 KSVVMTITGSEAP--DEWIVIGGHLDSTI 102 (299)
T ss_dssp EEEEEEECCSSEE--EEEEEEEEECCCCS
T ss_pred ceEEEEEECCCCC--CCEEEEEeccccCC
Confidence 6999987665311 23699999999985
No 98
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=53.49 E-value=5.6 Score=39.41 Aligned_cols=44 Identities=20% Similarity=0.087 Sum_probs=29.9
Q ss_pred cchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCccccc
Q 013257 233 LDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQ 279 (447)
Q Consensus 233 lDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~ 279 (447)
.||+.++++++.+++.+.+.. ......+.++|+.+||+|+.|+.
T Consensus 118 ~D~k~~~a~~l~a~~~l~~~~---~~~~~~v~~~~~~~EE~g~~G~~ 161 (393)
T 1cg2_A 118 ADDKGGNAVILHTLKLLKEYG---VRDYGTITVLFNTDEEKGSFGSR 161 (393)
T ss_dssp TTTHHHHHHHHHHHHHHHHTT---CCCSSEEEEEEESCGGGTTTTTH
T ss_pred ccchHHHHHHHHHHHHHHhcC---CCCCCCEEEEEEcccccCCccHH
Confidence 688888888888777664211 01234678888888888877655
No 99
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=52.64 E-value=6.3 Score=38.52 Aligned_cols=48 Identities=15% Similarity=0.247 Sum_probs=30.9
Q ss_pred ChHHHHhcCCCCcEEEech-hh-hccchHHhhc---CHHHHHHHHHHHHHHHHHh
Q 013257 387 TIGPILASGVGIRTVDVGA-PQ-LSMHSIREMC---AVDDVKHSYEHFKAFFQEF 436 (447)
Q Consensus 387 T~g~i~~a~~Gi~t~digi-P~-ryMHS~~E~~---~~~Di~~~~~ll~~f~~~~ 436 (447)
+-.++. +.|||++.+.- |. .+-||+.-+. +..-+....+++.+|+.+|
T Consensus 274 Dh~~F~--~~GiP~~~~~~~~~~~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 274 DHIPFL--RRGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp TTHHHH--TTTCCEEEECCSSCCTTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHH--HCCCCEEEEEcCCCCCCCCCCCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 335664 34999999874 21 4679997655 4555566667777776554
No 100
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=51.81 E-value=9.6 Score=37.29 Aligned_cols=47 Identities=13% Similarity=0.105 Sum_probs=32.5
Q ss_pred HHHHhcCCCCcEEEec-hhh-hccchHHhh---cCHHHHHHHHHHHHHHHHHhh
Q 013257 389 GPILASGVGIRTVDVG-APQ-LSMHSIREM---CAVDDVKHSYEHFKAFFQEFS 437 (447)
Q Consensus 389 g~i~~a~~Gi~t~dig-iP~-ryMHS~~E~---~~~~Di~~~~~ll~~f~~~~~ 437 (447)
.|+. +.|||++++- .|- .+=|++.-+ ++...++++.+++.+|+.+|-
T Consensus 272 ~pF~--~~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL 323 (330)
T 4fai_A 272 IPFL--RRNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALEYL 323 (330)
T ss_dssp HHHH--TTTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HCCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 5553 4699999872 332 245888755 566667888999999987653
No 101
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=48.97 E-value=13 Score=37.49 Aligned_cols=30 Identities=23% Similarity=0.244 Sum_probs=21.8
Q ss_pred CeEEEEEeCCcc-cCCCCeEEEEeecCCCce
Q 013257 36 STIIAFAVGKKY-VAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 36 gnlia~~~g~~~-~~~~~~vmi~AH~De~g~ 65 (447)
+||||...|+.+ ....+.+|++||+|+++.
T Consensus 204 ~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~ 234 (421)
T 2ek8_A 204 HNVIATKKPDANKKNTNDIIIIGSHHDSVEK 234 (421)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEEEECCCCTT
T ss_pred cceEEEecCcccCCCCCCEEEEecccccCCC
Confidence 699998877532 011357999999999974
No 102
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=46.49 E-value=9.5 Score=38.68 Aligned_cols=27 Identities=11% Similarity=-0.025 Sum_probs=20.0
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
.|++|...|+.+ .+.+++.||||-+-.
T Consensus 97 ~~vva~~~~~~~---g~~i~l~ah~Davp~ 123 (445)
T 3io1_A 97 AGVVATLDTGRP---GPTLAFRVDMDALDL 123 (445)
T ss_dssp CCEEEEEECSSC---CCEEEEEEECCCCCC
T ss_pred CEEEEEEeCCCC---CCEEEEEEecCCcCC
Confidence 589998766532 346999999998753
No 103
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=44.35 E-value=10 Score=38.64 Aligned_cols=29 Identities=28% Similarity=0.256 Sum_probs=21.9
Q ss_pred CCeEEEEEeCCcccCCCCeEEEEeecCCCce
Q 013257 35 HSTIIAFAVGKKYVAGNGFHVVGAHTDSPCL 65 (447)
Q Consensus 35 ~gnlia~~~g~~~~~~~~~vmi~AH~De~g~ 65 (447)
..||||...|+.++ .+.+|++||+|+++.
T Consensus 235 ~~Nvi~~~~g~~~~--~~~i~~~aH~Ds~~~ 263 (444)
T 3iib_A 235 SYNVIAEVKGSTKA--DEIVLIGAHLDSWDE 263 (444)
T ss_dssp EEEEEEEECCSTEE--EEEEEEEEECCCCSS
T ss_pred eEEEEEEEeCCCCC--CCEEEEEeecccCCC
Confidence 36999998776421 246999999999863
No 104
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=43.87 E-value=9 Score=39.20 Aligned_cols=50 Identities=12% Similarity=0.024 Sum_probs=35.1
Q ss_pred cccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEecccc-----CcccccccCC
Q 013257 231 GRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEV-----GSDSAQGAGS 283 (447)
Q Consensus 231 kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEV-----Gsrga~gA~~ 283 (447)
..+|+..++++++.+++.+.+.+ ......+.++|+..||+ |+.|+.....
T Consensus 121 g~~D~k~gvaa~L~a~~~L~~~~---~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 121 GKYDGILGVLAGLEVLRTFKDNN---YVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHT---CCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHHHHHcC---CCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 34799999999999887664211 01245688999999998 5556665544
No 105
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=32.82 E-value=20 Score=38.54 Aligned_cols=28 Identities=25% Similarity=0.191 Sum_probs=21.4
Q ss_pred CCeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 35 HSTIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 35 ~gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
..||||...|+..+ ...||++||+|+.+
T Consensus 266 ~~NVi~~i~G~~~~--~~~vvvgaH~Ds~~ 293 (640)
T 3kas_A 266 ILNIFGVIKGFVEP--DHYVVVGAQRDAWG 293 (640)
T ss_dssp EEEEEEEECCSSEE--EEEEEEEEECCCSS
T ss_pred EEEEEEEEeCCcCC--CCceeeecccCCCC
Confidence 36999998886321 24699999999985
No 106
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=29.46 E-value=25 Score=38.33 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=20.9
Q ss_pred CeEEEEEeCCcccCCCCeEEEEeecCCCc
Q 013257 36 STIIAFAVGKKYVAGNGFHVVGAHTDSPC 64 (447)
Q Consensus 36 gnlia~~~g~~~~~~~~~vmi~AH~De~g 64 (447)
+||||...|...+ ...|||+||+|+..
T Consensus 313 ~NVi~~i~G~~~~--~~~vllgaH~Ds~~ 339 (707)
T 3fed_A 313 YNVVGTIRGSVEP--DRYVILGGHRDSWV 339 (707)
T ss_dssp EEEEEEECCSSEE--EEEEEEEEECCCSS
T ss_pred EEEEEEEeCCCCC--CceEEEeccccCCC
Confidence 6999998886421 34699999999974
No 107
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=24.39 E-value=84 Score=25.10 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE
Q 013257 355 NAVTSFVFREVASKHNLPVQDF 376 (447)
Q Consensus 355 ~~~~~~~l~~~a~~~~Ip~Q~~ 376 (447)
...+...++++|+++|||+...
T Consensus 25 ~~~~A~~I~e~A~e~gVPi~e~ 46 (93)
T 2vt1_B 25 TNQCALAVRKYANEVGIPTVRD 46 (93)
T ss_dssp EHHHHHHHHHHHHHTTCCEEEC
T ss_pred CcHHHHHHHHHHHHcCCCEEEC
Confidence 3568899999999999998864
Done!